Citrus Sinensis ID: 001023
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1185 | 2.2.26 [Sep-21-2011] | |||||||
| P98204 | 1158 | Phospholipid-transporting | yes | no | 0.977 | 1.0 | 0.713 | 0.0 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.887 | 0.836 | 0.380 | 0.0 | |
| Q8TF62 | 1192 | Probable phospholipid-tra | yes | no | 0.893 | 0.888 | 0.370 | 0.0 | |
| P70704 | 1149 | Probable phospholipid-tra | no | no | 0.886 | 0.913 | 0.368 | 0.0 | |
| Q9NTI2 | 1148 | Probable phospholipid-tra | no | no | 0.843 | 0.871 | 0.381 | 0.0 | |
| P98198 | 1209 | Probable phospholipid-tra | no | no | 0.888 | 0.870 | 0.370 | 0.0 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | no | no | 0.898 | 0.914 | 0.368 | 0.0 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.888 | 0.868 | 0.368 | 0.0 | |
| P98200 | 1148 | Probable phospholipid-tra | no | no | 0.844 | 0.871 | 0.380 | 0.0 | |
| Q29449 | 1149 | Probable phospholipid-tra | no | no | 0.886 | 0.913 | 0.368 | 0.0 |
| >sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1764 bits (4570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 845/1185 (71%), Positives = 983/1185 (82%), Gaps = 27/1185 (2%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGD 60
MD S + PH + SSR S+SS ++ EVT GDLGSK +R+GS G D
Sbjct: 1 MDPRKSIDKP-PHHDPILGVSSRWSVSSKDNK--------EVTFGDLGSKRIRHGSAGAD 51
Query: 61 SEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
SE LSMSQKEI +EDAR +YINDP ++NE+FEF GNSI+T KYS+ TF+PRNLFEQFHRV
Sbjct: 52 SEMLSMSQKEIKDEDARLIYINDPDRTNERFEFTGNSIKTAKYSVFTFLPRNLFEQFHRV 111
Query: 121 AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLAN 180
AYIYFLVIAVLNQLPQLAVFGRG SI+PLAFVL V+AIKDAYED+RRHRSDR+ENNRLA
Sbjct: 112 AYIYFLVIAVLNQLPQLAVFGRGASIMPLAFVLLVSAIKDAYEDFRRHRSDRVENNRLAL 171
Query: 181 VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
V ++QF+EKKWK IRVGE+IK+++N+T+PCDMVLL+TSDPTGV Y+QT NLDGESNLKT
Sbjct: 172 VFEDHQFREKKWKHIRVGEVIKVQSNQTLPCDMVLLATSDPTGVVYVQTTNLDGESNLKT 231
Query: 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
RYAKQETLLK + E+ +G IKCEKPNRNIYGF ANME+DG+RLSLGPSNI+LRGCELKN
Sbjct: 232 RYAKQETLLKAADMESFNGFIKCEKPNRNIYGFQANMEIDGRRLSLGPSNIILRGCELKN 291
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
T+WALGV VYAG ETK MLN+SGAPSKRS LE MN EII LS FL+ LCT+ + AAVW
Sbjct: 292 TAWALGVVVYAGGETKAMLNNSGAPSKRSRLETRMNLEIILLSLFLIVLCTIAAATAAVW 351
Query: 361 LKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISM 420
L+ H D+LD + +YRRKD+SE NYKYYGWG EI FTF M+VIV+Q+MIPISLYISM
Sbjct: 352 LRTHRDDLDTILFYRRKDYSERPGGKNYKYYGWGWEIFFTFFMAVIVYQIMIPISLYISM 411
Query: 421 ELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480
ELVR+GQAYFM D MYDE+S S FQCRALNINEDLGQIKY+FSDKTGTLT+NKMEF+C
Sbjct: 412 ELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQIKYLFSDKTGTLTDNKMEFQC 471
Query: 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540
A I G+DYS + SE GYS++VDG +L+PK+ V VDP LLQL+++GK TEE K
Sbjct: 472 ACIEGVDYSDREP-ADSEHPGYSIEVDGIILKPKMRVRVDPVLLQLTKTGKATEEAKRAN 530
Query: 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVI 600
+FFL+LAACNTIVP+V +TSDPNVKLVDYQGESPDEQALVYAAAAYGF+LIERTSGHIVI
Sbjct: 531 EFFLSLAACNTIVPIVSNTSDPNVKLVDYQGESPDEQALVYAAAAYGFLLIERTSGHIVI 590
Query: 601 DIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVI 660
+++G+ Q RFNVLGLHEFDSDRKRMSVILG PD +V LFVKGAD+SMF V+ ++ VI
Sbjct: 591 NVRGETQ-RFNVLGLHEFDSDRKRMSVILGCPDMSVKLFVKGADSSMFGVMDESYG-GVI 648
Query: 661 RGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 720
T+ LHAYSS GLRTLVVGMREL+ SEFEQW SSFEAAS AL GRA LLRKVA ++E
Sbjct: 649 HETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEAASTALIGRAGLLRKVAGNIET 708
Query: 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 780
NL I+GA+ IEDKLQ+GVPEAIESLR AGIKVWVLTGDKQETAISIG+SS+LLT M Q+
Sbjct: 709 NLRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDKQETAISIGFSSRLLTRNMRQI 768
Query: 781 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS 840
+INSNS +SCR+SLE+A A ++ N E + +ALIIDGTSL+Y+LD+
Sbjct: 769 VINSNSLDSCRRSLEEANA---------SIASNDESDN------VALIIDGTSLIYVLDN 813
Query: 841 ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVG 900
+L++ LFQ+A CS +LCCRVAP QKAGIVALVK RTSDMTLAIGDGANDVSMIQMADVG
Sbjct: 814 DLEDVLFQVACKCSAILCCRVAPFQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVG 873
Query: 901 VGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 960
VGISGQEGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV V +LFW
Sbjct: 874 VGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLILFW 933
Query: 961 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQEC 1020
YVLFT +TLTTAI EWSSVLYSVIYT++PTI++ ILDKDL R+TLL +PQLYG G R E
Sbjct: 934 YVLFTCYTLTTAITEWSSVLYSVIYTAIPTIIIGILDKDLGRQTLLDHPQLYGVGQRAEG 993
Query: 1021 YNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR 1080
Y+T LFW TM DT+WQS IFFIP AYW STID SS+GDLWT+A V++VN+HLAMDVIR
Sbjct: 994 YSTTLFWYTMIDTIWQSAAIFFIPMFAYWGSTIDTSSLGDLWTIAAVVVVNLHLAMDVIR 1053
Query: 1081 WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRF 1140
W WITHA IWGSI+A ICV++ID +P+LPGYWA F+V KT +FWFCL+ I+V +L+PRF
Sbjct: 1054 WNWITHAAIWGSIVAACICVIVIDVIPTLPGYWAIFQVGKTWMFWFCLLAIVVTSLLPRF 1113
Query: 1141 LVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1185
+KFL +YY P DV+IAREAEK+G RE +EMN + DPP+R
Sbjct: 1114 AIKFLVEYYRPSDVRIAREAEKLGTFRESQPVGVEMNLIQDPPRR 1158
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/1129 (38%), Positives = 641/1129 (56%), Gaps = 77/1129 (6%)
Query: 68 QKEISEED--ARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYF 125
+K++ ED R + +ND ++ F N++ T KYS TF+P+ L EQF + A ++F
Sbjct: 134 KKQVKPEDLGPRQIILNDYSANH----FLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFF 189
Query: 126 LVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNN 185
L AV+ Q+P + R +I P+ VLSV+ IK+ ED +R + D+ N VL
Sbjct: 190 LFTAVVQQIPGITPVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGT 249
Query: 186 QFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQ 245
F EK+WKD+ VG+I+KI + P D+VLLS+S+P G+ Y++T NLDGE+NLK + A
Sbjct: 250 GFVEKQWKDVVVGDIVKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALP 309
Query: 246 ET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEV--DGKRLSLGPSNILLRGCELKNT 301
ET LLK E +SG +K E+PN N+Y F A +++ + L L P +LLRG +L+NT
Sbjct: 310 ETAGLLKPVELGQLSGEVKSEQPNNNLYTFDATLKLLPSDRELPLSPDQLLLRGAQLRNT 369
Query: 302 SWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWL 361
W G+ V+ G E+K+M N++ P KR+ +E +NS+I+ L V LC S+ A +
Sbjct: 370 PWVYGIVVFTGHESKLMKNTTETPIKRTSVEKQVNSQILFLLCIFVFLCFASSLGALIHR 429
Query: 362 KRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISME 421
+ L Y+ Y + G + L TF I++ ++PISL+++ E
Sbjct: 430 SVYGSALSYVKYTSNRA-------------GMFFKGLLTFW---ILYSNLVPISLFVTFE 473
Query: 422 LVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCA 481
LVR QA + D MY+E + + CR ++ E+LGQ+ Y+FSDKTGTLT N+MEFR
Sbjct: 474 LVRYIQAQLISSDLDMYNEETDTPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFRQC 533
Query: 482 SIWGIDYSG---GNARSHSEEVGYSVQV-DGKVLRPKLTVNVDPHLLQLSRSGKNTEEGK 537
+I G+ Y+ + + SE++ + + D L+ L K++E
Sbjct: 534 TIAGVAYADVIPEDRQFTSEDLDSDMYIYDFDTLKENL---------------KHSENAS 578
Query: 538 HVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGH 597
++ F L L+ C+T++P D + + YQ SPDE ALV AA+ G+ + R
Sbjct: 579 LIHQFLLVLSICHTVIP----EYDESTNSIKYQASSPDEGALVKGAASIGYKFLARKPHL 634
Query: 598 IVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNM 657
+ + I G+ +S + +L + EF+S RKRMS++ PD + L+VKGADT + +A +
Sbjct: 635 VTVSIFGKDES-YELLHICEFNSTRKRMSIVFRCPDGKIRLYVKGADTVIMERLAS--DN 691
Query: 658 NVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASS 717
++ T HL Y+++GLRTL + MRE+ E+++W + FE A+++L RA L A
Sbjct: 692 PYLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFETAASSLVDRAQKLMDAAEE 751
Query: 718 VENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 777
+E +L +LGA+ IED+LQ GVP+ I +L+ AGIK+WVLTGD+QETAI+IG S KL+ M
Sbjct: 752 IEKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQETAINIGMSCKLIDEDM 811
Query: 778 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYI 837
VI+N +KE+ +S+ KL ++ + +E ++G V +AL+IDG SL Y
Sbjct: 812 GLVIVNEETKEATAESV------MAKLSSI----YRNEATTG-NVESMALVIDGVSLTYA 860
Query: 838 LDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMA 897
LD L+ + F+LA C V+CCRV+PLQKA IV +VK T ++ LAIGDGANDV MIQ A
Sbjct: 861 LDFSLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGANDVPMIQAA 920
Query: 898 DVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFV 957
VGVGISG EG QAV SSDF++ QF +L LLLVHG W YQR+ +ILY+FY+N L
Sbjct: 921 HVGVGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSFYKNIALYMT 980
Query: 958 LFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHR 1017
FWY AF+ WS LY+V++T LP +V+ I D+ +S L Q PQLY G R
Sbjct: 981 QFWYAFCNAFSGQVIFESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQYPQLYQLGQR 1040
Query: 1018 QECYNTKLFWLTMADTLWQSVVIFFIPFGA-YWDSTIDVSSIGDLW----TLAVVILVNI 1072
E +N K FW + + + S+++F Y+D W TL IL +
Sbjct: 1041 SEFFNLKRFWSWITNGFYHSLLLFLCSIAVFYYDGPNKDGLASGHWVWGTTLYAAILATV 1100
Query: 1073 HLAMDVIRWTWITHAVI--WGSIIATLICVMIID-AVPSL---PGYWAFFEVAKTRL-FW 1125
+I W + VI GS + ++ + I A P++ Y+ L FW
Sbjct: 1101 LGKAALISNHWTQYTVIATLGSFLLWIVFMPIYAVAAPAIGFSKEYYGIIPHLYGNLKFW 1160
Query: 1126 FCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEK--VGNLRERGAG 1172
L+++ AL+ F+ K+ + YYP + +E +K V + R R G
Sbjct: 1161 ASLLVLPTIALMRDFVWKYSSRMYYPEEYHYVQEIQKYNVTDYRPRIVG 1209
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q8TF62|AT8B4_HUMAN Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/1117 (37%), Positives = 648/1117 (58%), Gaps = 58/1117 (5%)
Query: 67 SQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFL 126
S+K++ E + R V ND + NEKF++A N I T KY+ILTF+P NLFEQF RVA YFL
Sbjct: 4 SEKKLREVE-RIVKANDR-EYNEKFQYADNRIHTSKYNILTFLPINLFEQFQRVANAYFL 61
Query: 127 VIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQ 186
+ +L +P+++ +I+PL V+++TA+KDA +DY RH+SD NNR + VL+N++
Sbjct: 62 CLLILQLIPEISSLTWFTTIVPLVLVITMTAVKDATDDYFRHKSDNQVNNRQSEVLINSK 121
Query: 187 FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYA--- 243
Q +KW +++VG+IIK++ N+ + D++LLS+S+P G+ Y++T LDGE+NLK R+A
Sbjct: 122 LQNEKWMNVKVGDIIKLENNQFVAADLLLLSSSEPHGLCYVETAELDGETNLKVRHALSV 181
Query: 244 KQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303
E + G++ CE PN + F + + SL I+LRGC L+NTSW
Sbjct: 182 TSELGADISRLAGFDGIVVCEVPNNKLDKFMGILSWKDSKHSLNNEKIILRGCILRNTSW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
G+ ++AG +TK+M NS KR+ ++ MN+ ++ + FL+ L +++I ++W +
Sbjct: 242 CFGMVIFAGPDTKLMQNSGKTKFKRTSIDRLMNTLVLWIFGFLICLGIILAIGNSIWESQ 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
D+ +R F EGE + + G+ TF +I+ ++PISLY+S+E++
Sbjct: 302 TGDQ------FRTFLFWNEGEKSSV-FSGF-----LTFWSYIIILNTVVPISLYVSVEVI 349
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF-RCA- 481
RLG +YF+ D MY + R +NE+LGQI+Y+FSDKTGTLT+N M F RC+
Sbjct: 350 RLGHSYFINWDRKMYYSRKAIPAVARTTTLNEELGQIEYIFSDKTGTLTQNIMTFKRCSI 409
Query: 482 --SIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHV 539
I+G + + ++ + V K + D HL++ + G V
Sbjct: 410 NGRIYGEVHDDLDQKTEITQEKEPVDFSVKSQADREFQFFDHHLMESIKMGD-----PKV 464
Query: 540 YDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
++F LA C+T++ + + + + YQ +SPDE ALV AA +GF+ RT I
Sbjct: 465 HEFLRLLALCHTVM-----SEENSAGELIYQVQSPDEGALVTAARNFGFIFKSRTPETIT 519
Query: 600 IDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNV 659
I+ G + + +L +F++ RKRMSVI+ P+ + L+ KGADT +F + + N +
Sbjct: 520 IEELGTLVT-YQLLAFLDFNNTRKRMSVIVRNPEGQIKLYSKGADTILFEKLHPS-NEVL 577
Query: 660 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 719
+ T HL ++ GLRTL + R+L F++W E A+ A R + + +E
Sbjct: 578 LSLTSDHLSEFAGEGLRTLAIAYRDLDDKYFKEWHKMLEDANAATEERDERIAGLYEEIE 637
Query: 720 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779
+L +LGA+ +EDKLQ+GV E + SL A IK+WVLTGDKQETAI+IGY+ +LT M
Sbjct: 638 RDLMLLGATAVEDKLQEGVIETVTSLSLANIKIWVLTGDKQETAINIGYACNMLTDDMND 697
Query: 780 V-IINSNS----KESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ------LALI 828
V +I N+ +E RK+ ++ ++ V ++ + + ALI
Sbjct: 698 VFVIAGNNAVEVREELRKAKQNLFGQNRNFSNGHVVCEKKQQLELDSIVEETITGDYALI 757
Query: 829 IDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGA 888
I+G SL + L+S++ L +LA C V+CCRV PLQKA +V LVK + +TLAIGDGA
Sbjct: 758 INGHSLAHALESDVKNDLLELACMCKTVICCRVTPLQKAQVVELVKKYRNAVTLAIGDGA 817
Query: 889 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNF 948
NDVSMI+ A +GVGISGQEG QAV++SD++ QFR+L LLLVHG W+Y RM + Y F
Sbjct: 818 NDVSMIKSAHIGVGISGQEGLQAVLASDYSFAQFRYLQRLLLVHGRWSYFRMCKFLCYFF 877
Query: 949 YRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQN 1008
Y+N V FW+ F F+ T ++W L++++YTSLP + + I D+D+S + +
Sbjct: 878 YKNFAFTLVHFWFGFFCGFSAQTVYDQWFITLFNIVYTSLPVLAMGIFDQDVSDQNSVDC 937
Query: 1009 PQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWD-STIDVSSIGDLWTLAV- 1066
PQLY G +N + F++ + ++ S+V+FFIP+GA+++ + D I D + AV
Sbjct: 938 PQLYKPGQLNLLFNKRKFFICVLHGIYTSLVLFFIPYGAFYNVAGEDGQHIADYQSFAVT 997
Query: 1067 -----VILVNIHLAMDVIRWTWITHAVIWGSIIA--TLICVMIIDAVPSL-PGYWAFFEV 1118
VI+V++ +A+D WT+I H IWGSI +++ M + + + P + F
Sbjct: 998 MATSLVIVVSVQIALDTSYWTFINHVFIWGSIAIYFSILFTMHSNGIFGIFPNQFPFVGN 1057
Query: 1119 AKTRL----FWFCLMIILVAALIPRFLVKFLYQYYYP 1151
A+ L W +++ VA+++P +FL YP
Sbjct: 1058 ARHSLTQKCIWLVILLTTVASVMPVVAFRFLKVDLYP 1094
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 723 bits (1866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1136 (36%), Positives = 633/1136 (55%), Gaps = 86/1136 (7%)
Query: 43 TLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGK 102
T+ ++ S+ Y SE S++ +E+ R ++IN P + +F N + T K
Sbjct: 7 TVSEIRSRAEGYEKTDDVSEKTSLA----DQEEVRTIFINQP----QLTKFCNNHVSTAK 58
Query: 103 YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAY 162
Y+++TF+PR L+ QF R A +FL IA+L Q+P ++ GR +++PL F+L+V AIK+
Sbjct: 59 YNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 118
Query: 163 EDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222
ED +RH++D N + VL N ++ W+ + VG+I+ IK E IP D VLLS+S+P
Sbjct: 119 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQ 178
Query: 223 GVAYLQTINLDGESNLKTRYAKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVD 280
+ Y++T NLDGE+NLK R T + + ISG I+CE PNR++Y F N+ +D
Sbjct: 179 AMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMRISGRIECESPNRHLYDFVGNIRLD 238
Query: 281 GK-RLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
G + LG ILLRG +L+NT W G+ VY G +TK+M NS+ P K S +E N +I
Sbjct: 239 GHGTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQI 298
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
+ L L+A+ V S+ +A+W +RH+ + Y+ + +YG
Sbjct: 299 LILFCILIAMSLVCSVGSAIWNRRHSGKDWYL----------------HLHYGGASNFGL 342
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
FL +I+F +IPISL +++E+V+ QAYF+ D M+ E + + R N+NE+LGQ
Sbjct: 343 NFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQ 402
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
+KY+FSDKTGTLT N M+F+ +I G+ Y G + +E ++
Sbjct: 403 VKYIFSDKTGTLTCNVMQFKKCTIAGVAY--GQSSQFGDEKTFN---------------- 444
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
DP LL ++ N + +F +A C+T VP + + YQ SPDE AL
Sbjct: 445 DPSLLDNLQN--NHPTAPIICEFLTMMAVCHTAVP------EREGDKIIYQAASPDEGAL 496
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 639
V AA F+ RT ++ID GQ + R+ +L + EF S RKRMSV++ P + L+
Sbjct: 497 VRAAKQLNFVFTGRTPDSVIIDSLGQEE-RYELLNVLEFTSARKRMSVVVRTPSGKLRLY 555
Query: 640 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699
KGADT ++ +A+ I T HL +++ GLRTL + E+S S+FE+W++ +
Sbjct: 556 CKGADTVIYERLAETSKYKEI--TLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHR 613
Query: 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDK 759
AS ++ R L + +E NL +LGA+ IEDKLQ VPE IE+L A IK+W+LTGDK
Sbjct: 614 ASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDK 673
Query: 760 QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819
QETAI+IG+S +LL M ++IN S + R++L S+ T+ G + E
Sbjct: 674 QETAINIGHSCRLLKRNMGMIVINEGSLDGTRETL------SRHCTTL-GDALRKEND-- 724
Query: 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSD 879
ALIIDG +L Y L + + LA +C V+CCRV+PLQK+ +V +VK +
Sbjct: 725 -----FALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKV 779
Query: 880 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQR 939
+TLAIGDGANDVSMIQ A VGVGISG EG QA SSD+++ QF++L LL+VHG WNY R
Sbjct: 780 ITLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNR 839
Query: 940 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKD 999
+ ILY FY+N VL + W+ F+ W LY+V++T++P + + I ++
Sbjct: 840 VSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERS 899
Query: 1000 LSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTI------ 1053
+ +L+ P+LY +NTK+FW+ + L+ SV++F+ P A T+
Sbjct: 900 CRKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTVFGNGKT 959
Query: 1054 -DVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDA 1105
D +G+ VVI V + ++ WTW +H IWGSI ++ I +
Sbjct: 960 SDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPM 1019
Query: 1106 VPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAE 1161
P + G A + + +FW L+ I VA+L+ L K + + + V +E E
Sbjct: 1020 APDMSGEAAM--LFSSGVFWVGLLSIPVASLLLDVLYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1098 (38%), Positives = 616/1098 (56%), Gaps = 98/1098 (8%)
Query: 73 EEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLN 132
E AR +Y+N P + +F N I T KYS+LTF+PR L+EQ R A +FL IA+L
Sbjct: 12 EAPARTIYLNQPHLN----KFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQ 67
Query: 133 QLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKW 192
Q+P ++ GR +++PL +L++ IK+ ED++RH++D N + VL N + W
Sbjct: 68 QIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMW 127
Query: 193 KDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYA--------K 244
K++ VG+I+K+ + +P D+VLLS+S+P + Y++T NLDGE+NLK R
Sbjct: 128 KEVAVGDIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQT 187
Query: 245 QETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRL-SLGPSNILLRGCELKNTSW 303
+E L+K +SG I+CE PNR++Y F N+ +DGK L +LGP ILLRG +L+NT W
Sbjct: 188 REVLMK------LSGTIECEGPNRHLYDFTGNLNLDGKSLVALGPDQILLRGTQLRNTQW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
G+ VY G +TK+M NS+ AP KRS +E N +I+ L L+ + V S A W +
Sbjct: 242 VFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRS 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
H ++ Y+ ++ D + DN+ Y L TF +I++ +IPISL +++E+V
Sbjct: 302 HGEKNWYI---KKMDTTS----DNFGYN------LLTF---IILYNNLIPISLLVTLEVV 345
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
+ QA F+ D+ MY + + R N+NE+LGQ+KY+FSDKTGTLT N M F+ SI
Sbjct: 346 KYTQALFINWDTDMYYIGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSI 405
Query: 484 WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV----DPHLLQLSRSGKNTEEGKH- 538
G+ Y H E+ D P + DP LL KN E+ +H
Sbjct: 406 AGVTYG------HFPELAREPSSDDFCRMPPPCSDSCDFDDPRLL------KNIED-RHP 452
Query: 539 ----VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERT 594
+ +F LA C+T+VP + + + YQ SPDE ALV A GF+ RT
Sbjct: 453 TAPCIQEFLTLLAVCHTVVP------EKDGDNIIYQASSPDEAALVKGAKKLGFVFTART 506
Query: 595 SGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKA 654
++I+ GQ Q+ F +L + EF SDRKRMSVI+ P + L+ KGAD +F ++K
Sbjct: 507 PFSVIIEAMGQEQT-FGILNVLEFSSDRKRMSVIVRTPSGRLRLYCKGADNVIFERLSK- 564
Query: 655 LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKV 714
+ + T HL +++ GLRTL V +LS +E+E+W ++ AS L RA L +
Sbjct: 565 -DSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASTILKDRAQRLEEC 623
Query: 715 ASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774
+E NL +LGA+ IED+LQ GVPE I +L A IK+WVLTGDKQETAI+IGYS +L++
Sbjct: 624 YEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVS 683
Query: 775 SKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ-LALIIDGTS 833
M +++ +S ++ R ++ H ++ + G +ALIIDG +
Sbjct: 684 QNMALILLKEDSLDATRAAI---------------TQHCTDLGNLLGKENDVALIIDGHT 728
Query: 834 LVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSM 893
L Y L E+ LA +C V+CCRV+PLQK+ IV +VK R +TLAIGDGANDV M
Sbjct: 729 LKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGM 788
Query: 894 IQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAV 953
IQ A VGVGISG EG QA +SD+A+ QF +L LLLVHG W+Y R+ ILY FY+N V
Sbjct: 789 IQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVV 848
Query: 954 LVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYG 1013
L + W+ F+ W LY+VI+T+LP + I ++ ++ ++L+ PQLY
Sbjct: 849 LYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYK 908
Query: 1014 AGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTI-------DVSSIGDLWTLAV 1066
E +NTK+FW + L S+++F+ P A T+ D +G++ V
Sbjct: 909 ITQNGEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTVLTSGHATDYLFVGNIVYTYV 968
Query: 1067 VILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAVPSLPGYWAFFEVA 1119
V+ V + ++ WT +H +WGS++ L+ I I P + G V
Sbjct: 969 VVTVCLKAGLETTAWTKFSHLAVWGSMLTWLVFFGIYSTIWPTIPIAPDMRGQATM--VL 1026
Query: 1120 KTRLFWFCLMIILVAALI 1137
+ FW L ++ A LI
Sbjct: 1027 SSAHFWLGLFLVPTACLI 1044
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98198|AT8B2_HUMAN Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/1116 (37%), Positives = 638/1116 (57%), Gaps = 63/1116 (5%)
Query: 65 SMSQKEIS--EEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAY 122
S S+K+ S E+ R ND + NEKF++A N I+T KY+ILTF+P NLFEQF VA
Sbjct: 19 SWSRKKPSWGTEEERRARANDR-EYNEKFQYASNCIKTSKYNILTFLPVNLFEQFQEVAN 77
Query: 123 IYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVL 182
YFL + +L +PQ++ +I+PL VL++TA+KDA +DY RH+SD NNR + VL
Sbjct: 78 TYFLFLLILQLIPQISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVL 137
Query: 183 VNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242
+N Q+++W ++ VG+IIK++ N+ + D++LLS+S+P G+ Y++T LDGE+N+K R
Sbjct: 138 INGILQQEQWMNVCVGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQ 197
Query: 243 AKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
A T L + + G + CE PN + F + + L N+LLRGC L+N
Sbjct: 198 AIPVTSELGDISKLAKFDGEVICEPPNNKLDKFSGTLYWKENKFPLSNQNMLLRGCVLRN 257
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
T W G+ ++AG +TK+M NS KR+ ++ MN+ ++ + FLV + +++I A+W
Sbjct: 258 TEWCFGLVIFAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIW 317
Query: 361 LKRHNDELD-YMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYIS 419
Y+P+ + D+ + G+ +F +I+ ++PISLY+S
Sbjct: 318 EHEVGMRFQVYLPW--------DEAVDSAFFSGF-----LSFWSYIIILNTVVPISLYVS 364
Query: 420 MELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479
+E++RLG +YF+ D M+ + + R +NE+LGQ++Y+FSDKTGTLT+N M F
Sbjct: 365 VEVIRLGHSYFINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFN 424
Query: 480 CASIWGIDYSG-GNARSHSEEVGY---SVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEE 535
SI G Y + H E+G V L K + DP LL+ + G
Sbjct: 425 KCSINGHSYGDVFDVLGHKAELGERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGD---- 480
Query: 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTS 595
H ++FF L+ C+T++ + + N + Y+ +SPDE ALV AA +GF+ RT
Sbjct: 481 -PHTHEFFRLLSLCHTVM-----SEEKNEGELYYKAQSPDEGALVTAARNFGFVFRSRTP 534
Query: 596 GHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL 655
I + G + + +L + +F++ RKRMSVI+ P+ + L+ KGADT + + +
Sbjct: 535 KTITVHEMGTAIT-YQLLAILDFNNIRKRMSVIVRNPEGKIRLYCKGADTILLDRLHHS- 592
Query: 656 NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVA 715
++ T HL+ Y+ GLRTLV+ ++L +E+W AS A R L +
Sbjct: 593 TQELLNTTMDHLNEYAGEGLRTLVLAYKDLDEEYYEEWAERRLQASLAQDSREDRLASIY 652
Query: 716 SSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS 775
VENN+ +LGA+ IEDKLQQGVPE I L A IK+WVLTGDKQETA++IGYS K+LT
Sbjct: 653 EEVENNMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYSCKMLTD 712
Query: 776 KMTQVIINSNS-----KESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG-------AGVA 823
MT+V I + +E RK+ E + S+ + G ++ + SS A
Sbjct: 713 DMTEVFIVTGHTVLEVREELRKAREKMMDSSRSVGN--GFTYQDKLSSSKLTSVLEAVAG 770
Query: 824 QLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLA 883
+ AL+I+G SL + L+++++ + + A C V+CCRV PLQKA +V LVK +TLA
Sbjct: 771 EYALVINGHSLAHALEADMELEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLA 830
Query: 884 IGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYM 943
IGDGANDVSMI+ A +GVGISGQEG QAV++SD++ QF+FL LLLVHG W+Y RM
Sbjct: 831 IGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKF 890
Query: 944 ILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRR 1003
+ Y FY+N V FW+ F F+ T +++ LY+++YTSLP + + + D+D+ +
Sbjct: 891 LCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQ 950
Query: 1004 TLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDV-SSIGDLW 1062
++ P+LY G +N + F++ +A ++ SV++FFIP+G + D+T D + + D
Sbjct: 951 RSMEYPKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQ 1010
Query: 1063 TLAV------VILVNIHLAMDVIRWTWITHAVIWGSI---IATLICVMIIDAVPSLPGYW 1113
+ AV VI+V++ + +D WT I H IWGS+ A L + P +
Sbjct: 1011 SFAVTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAMHSNGLFDMFPNQF 1070
Query: 1114 AFFEVAKTRL----FWFCLMIILVAALIPRFLVKFL 1145
F A+ L W +++ V ++P +FL
Sbjct: 1071 RFVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFL 1106
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1136 (36%), Positives = 631/1136 (55%), Gaps = 71/1136 (6%)
Query: 43 TLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGK 102
T+ ++ S+ Y SE S++ +E+ R ++IN P + +F N + T K
Sbjct: 7 TVSEIRSRAEGYEKTDDVSEKTSLA----DQEEVRTIFINQP----QLTKFCNNHVSTAK 58
Query: 103 YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAY 162
Y+I+TF+PR L+ QF R A +FL IA+L Q+P ++ GR +++PL F+L+V AIK+
Sbjct: 59 YNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 118
Query: 163 EDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222
ED +RH++D N + VL N ++ W+ + VGEI+K+ E +P D++ LS+S+P
Sbjct: 119 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVGEIVKVTNGEHLPADLISLSSSEPQ 178
Query: 223 GVAYLQTINLDGESNLKTRYAKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVD 280
+ Y++T NLDGE+NLK R T + V ISG I+CE PNR++Y F N+ +D
Sbjct: 179 AMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMRISGRIECESPNRHLYDFVGNIRLD 238
Query: 281 GK-RLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
G + LG ILLRG +L+NT W G+ VY G +TK+M NS+ P K S +E N +I
Sbjct: 239 GHGTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQI 298
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
+ L L+A+ V S+ +A+W +RH+ + Y+ YG
Sbjct: 299 LILFCILIAMSLVCSVGSAIWNRRHSGKDWYLNLN----------------YGGASNFGL 342
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
FL +I+F +IPISL +++E+V+ QAYF+ D M+ E + + R N+NE+LGQ
Sbjct: 343 NFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNEELGQ 402
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
+KY+FSDKTGTLT N M+F+ +I G+ Y G+ E+ G S
Sbjct: 403 VKYIFSDKTGTLTCNVMQFKKCTIAGVAY--GHV-PEPEDYGCSPDEWQNSQFGDEKTFS 459
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
D LL+ ++ N + +F +A C+T VP + + YQ SPDE AL
Sbjct: 460 DSSLLENLQN--NHPTAPIICEFLTMMAVCHTAVP------EREGDKIIYQAASPDEGAL 511
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 639
V AA F+ RT ++ID GQ + R+ +L + EF S RKRMSVI+ P + L+
Sbjct: 512 VRAAKQLNFVFTGRTPDSVIIDSLGQEE-RYELLNVLEFTSARKRMSVIVRTPSGKLRLY 570
Query: 640 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699
KGADT ++ +A+ I T HL +++ GLRTL + E+S S+F++W++ ++
Sbjct: 571 CKGADTVIYDRLAETSKYKEI--TLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQR 628
Query: 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDK 759
AS ++ R L + +E NL +LGA+ IEDKLQ VPE IE+L A IK+W+LTGDK
Sbjct: 629 ASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDK 688
Query: 760 QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819
QETAI+IG+S KLL M ++IN S + R++L S+ T+ G + E
Sbjct: 689 QETAINIGHSCKLLKKNMGMIVINEGSLDGTRETL------SRHCTTL-GDALRKEND-- 739
Query: 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSD 879
ALIIDG +L Y L + + LA +C V+CCRV+PLQK+ +V +VK +
Sbjct: 740 -----FALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKV 794
Query: 880 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQR 939
+TLAIGDGANDVSMIQ A VGVGISG EG QA SSD+++ QF++L LL++HG WNY R
Sbjct: 795 VTLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNR 854
Query: 940 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKD 999
+ ILY FY+N VL + W+ F+ W LY+V++T++P + + I ++
Sbjct: 855 VSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERS 914
Query: 1000 LSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYW-------DST 1052
+ +L+ P+LY +NTK+FW+ + L+ SV++F+ P A T
Sbjct: 915 CRKENMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKT 974
Query: 1053 IDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDA 1105
D +G+ VVI V + ++ WTW +H IWGSI ++ I I
Sbjct: 975 SDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPM 1034
Query: 1106 VPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAE 1161
P + G A + + +FW L+ I VA+L+ + K + + + V +E E
Sbjct: 1035 APDMSGEAAM--LFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/1130 (36%), Positives = 656/1130 (58%), Gaps = 77/1130 (6%)
Query: 77 RFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ 136
R VY ND +SN+ F GNSI T KY++ TF+P+ LFEQF R+A IYFL I+ L+ P
Sbjct: 36 RTVYCNDR-ESNQPVRFKGNSISTTKYNVFTFLPKGLFEQFRRIANIYFLGISCLSMTP- 93
Query: 137 LAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIR 196
++ ++ PL+ VL V+ IK+A+ED++R ++D NN +L + Q+ W+ ++
Sbjct: 94 ISPVSPITNVAPLSMVLLVSLIKEAFEDWKRFQNDMSINNSTVEILQDQQWVSIPWRKLQ 153
Query: 197 VGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETL-LKVPEKE 255
VG+I+KIK + P D++ +S+++ G+ Y++T NLDGE+NLK R A + T VPEK
Sbjct: 154 VGDIVKIKKDGFFPADILFMSSTNSDGICYVETANLDGETNLKIRKALERTWDYLVPEKA 213
Query: 256 -TISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQE 314
G I+CE+PN ++Y F N+ V + L L P +LLRGC L+NT + +G V+ G E
Sbjct: 214 YEFKGEIQCEQPNNSLYTFTGNLVVQKQTLPLSPDQLLLRGCSLRNTEYIVGAVVFTGHE 273
Query: 315 TKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYY 374
TKVM+N+ APSKRS LE ++ II + LV +C + +I ++ R + L
Sbjct: 274 TKVMMNAMNAPSKRSTLEKKLDKLIITIFCVLVTMCLIGAIGCSIVTDREDKYL------ 327
Query: 375 RRKDFSEEGEPDNYKYYGWGLEI-LFTFLMSVIVFQVMIPISLYISMELVRLGQA-YFMI 432
G ++ Y GL I FTF V +F +IPISLY+S+E+++ Q+ F+
Sbjct: 328 --------GLHNSDWEYRNGLMIGFFTFFTLVTLFSSIIPISLYVSIEMIKFIQSTQFIN 379
Query: 433 QDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDY---- 488
+D +MY +++ R N+NE+LGQ++Y+FSDKTGTLT N MEF SI G+ Y
Sbjct: 380 RDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGVSYGCGV 439
Query: 489 ---SGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLS-RSGKNTEEGKHVYDFFL 544
G A+ H +V + G + + DP L++ + R+ N + K + F
Sbjct: 440 TEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFD-DPRLMRGAWRNEPNPDLCK---ELFR 495
Query: 545 ALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVI---- 600
LA C+T++P D + + + YQ SPDE ALV AA +GF RT + +
Sbjct: 496 CLAICHTVLP----EGDESPEKIVYQAASPDEAALVTAAKNFGFFFYRRTPTMVYVRESH 551
Query: 601 -DIQGQRQS-RFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMN 658
+ G+ Q + +L + EF+S RKR SV+ PD + L+ KGAD +F +A ++ +
Sbjct: 552 VEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGRLVLYCKGADNVIFERLANGMD-D 610
Query: 659 VIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 718
V + T HL + S GLRTL + ++L+ ++ W F A +AL R L +VA +
Sbjct: 611 VRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSWNEKFIQAKSALRDREKKLDEVAELI 670
Query: 719 ENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 778
E +L ++G++ IEDKLQ+GVP IE+L AGIK+WVLTGDK ETAI+I Y+ L+ ++M
Sbjct: 671 EKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIWVLTGDKMETAINIAYACNLINNEMK 730
Query: 779 QVIINSNSKESCRKSLE--DAIAMSKKLK---------TVPGVSHNSERSSGAGVAQLAL 827
Q +I+S + ++ R++ E D + +++ +K ++ H+ +G +L+L
Sbjct: 731 QFVISSET-DAIREAEERGDQVEIARVIKEEVKRELKKSLEEAQHSLHTVAGP---KLSL 786
Query: 828 IIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDG 887
+IDG L+Y LD L L L+ C+ V+CCRV+PLQKA + +LV+ +TL+IGDG
Sbjct: 787 VIDGKCLMYALDPSLRVMLLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDG 846
Query: 888 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYN 947
ANDVSMIQ A VG+GISG EG QAVM+SDFA+ QFRFL LLLVHG W+Y R+ +++Y
Sbjct: 847 ANDVSMIQAAHVGIGISGMEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYF 906
Query: 948 FYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQ 1007
FY+N FW+ T F+ ++W L++V++T+LP IV+ + +KD+S +
Sbjct: 907 FYKNLTFTLTQFWFTFRTGFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKR 966
Query: 1008 NPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFI----PFGAYWDSTIDVSSIGDLWT 1063
P+LY G R + ++ + ++QS+V + FGA +S+ V + D+ T
Sbjct: 967 YPELYREGIRNSFFKWRVVAVWATSAVYQSLVCYLFVTTSSFGAV-NSSGKVFGLWDVST 1025
Query: 1064 L---AVVILVNIHLAM---DVIRWTWITHAVIWGSIIATLI-----CVMIIDAVPSLPGY 1112
+ +VI VN+ + + + RW +IT + GSI+A L+ C ++ + Y
Sbjct: 1026 MVFTCLVIAVNVRILLMSNSITRWHYIT---VGGSILAWLVFAFVYCGIMTPHDRNENVY 1082
Query: 1113 WAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEK 1162
+ + + T F+F L+++ + +L+ F+ + + ++++P D QI +E +
Sbjct: 1083 FVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPYDYQIVQEIHR 1132
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/1097 (38%), Positives = 610/1097 (55%), Gaps = 96/1097 (8%)
Query: 73 EEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLN 132
E AR +Y+N + +F N I T KYS+LTF+PR L+EQ R A +FL IA+L
Sbjct: 12 EAPARIIYLN----QSHLNKFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQ 67
Query: 133 QLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKW 192
Q+P ++ GR +++PL +L++ IK+ ED++RH++D N + VL N + W
Sbjct: 68 QIPDVSPTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMW 127
Query: 193 KDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQET----- 247
K++ VG+I+K+ + +P DMVL S+S+P G+ Y++T NLDGE+NLK R T
Sbjct: 128 KEVAVGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQT 187
Query: 248 ---LLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKR-LSLGPSNILLRGCELKNTSW 303
L+K +SG I+CE PNR++Y F N+ +DGK ++LGP ILLRG +L+NT W
Sbjct: 188 RDVLMK------LSGRIECEGPNRHLYDFTGNLHLDGKSSVALGPDQILLRGTQLRNTQW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
GV VY G ++K+M NS+ AP KRS +E N +I+ L L+ + V S+ A W
Sbjct: 242 VFGVVVYTGHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGS 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
H + +Y +K + DN+ Y L TF +I++ +IPISL +++E+V
Sbjct: 302 HGGK----SWYIKK---MDTNSDNFGYN------LLTF---IILYNNLIPISLLVTLEVV 345
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
+ QA F+ D MY + + R N+NE+LGQ+KY+FSDKTGTLT N M F+ SI
Sbjct: 346 KYTQALFINWDMDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSI 405
Query: 484 WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV----DPHLLQLSRSGKNTEE---- 535
G+ Y H E+ D T + DP LL KN E+
Sbjct: 406 AGVTYG------HFPELAREQSSDDFCRMTSCTNDSCDFNDPRLL------KNIEDQHPT 453
Query: 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTS 595
+ +F LA C+T+VP + + + YQ SPDE ALV A GF+ RT
Sbjct: 454 APCIQEFLTLLAVCHTVVP------EKDGDEIIYQASSPDEAALVKGAKKLGFVFTGRTP 507
Query: 596 GHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL 655
++I+ GQ Q+ F +L + EF SDRKRMSVI+ LP + L+ KGAD +F ++K
Sbjct: 508 YSVIIEAMGQEQT-FGILNVLEFSSDRKRMSVIVRLPSGQLRLYCKGADNVIFERLSK-- 564
Query: 656 NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVA 715
+ + T HL +++ GLRTL V +LS +E+E+W ++ AS L RA L +
Sbjct: 565 DSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASIILKDRAQRLEECY 624
Query: 716 SSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS 775
+E NL +LGA+ IED+LQ GVPE I +L A IK+WVLTGDKQETAI+IGYS +L++
Sbjct: 625 EIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQ 684
Query: 776 KMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ-LALIIDGTSL 834
M +++ +S ++ R ++ H ++ + G +ALIIDG +L
Sbjct: 685 NMALILLKEDSLDATRAAI---------------TQHCTDLGNLLGKENDVALIIDGHTL 729
Query: 835 VYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMI 894
Y L E+ LA +C V+CCRV+PLQK+ IV +VK R +TLAIGDGANDV MI
Sbjct: 730 KYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMI 789
Query: 895 QMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVL 954
Q A VGVGISG EG QA +SD+A+ QF +L LLLVHG W+Y R+ ILY FY+N VL
Sbjct: 790 QTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVL 849
Query: 955 VFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGA 1014
+ W+ F+ W LY+VI+T+LP + I ++ ++ ++L+ PQLY
Sbjct: 850 YIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYRI 909
Query: 1015 GHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDST-------IDVSSIGDLWTLAVV 1067
E +NTK+FW + L S+++F++P A T D +G++ VV
Sbjct: 910 TQNAEGFNTKVFWGHCINALVHSLILFWVPMKALEHDTPVTSGHATDYLFVGNIVYTYVV 969
Query: 1068 ILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDAVPSLPGYWAFFEVAK 1120
+ V + ++ WT +H +WGS++ L+ + I P + G V
Sbjct: 970 VTVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGVYSTIWPTIPIAPDMKGQATM--VLS 1027
Query: 1121 TRLFWFCLMIILVAALI 1137
+ FW L ++ A LI
Sbjct: 1028 SAYFWLGLFLVPTACLI 1044
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/1136 (36%), Positives = 633/1136 (55%), Gaps = 86/1136 (7%)
Query: 43 TLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGK 102
T+ ++ S+ Y SE S++ +E+ R ++IN P + +F N + T K
Sbjct: 7 TVSEIRSRAEGYEKTDDVSEKTSLA----DQEEIRTIFINQP----QLTKFCNNHVSTAK 58
Query: 103 YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAY 162
Y+I+TF+PR L+ QF R A +FL IA+L Q+P ++ GR +++PL F+L+V AIK+
Sbjct: 59 YNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVSPTGRYTTLVPLLFILAVAAIKEII 118
Query: 163 EDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222
ED +RH++D N + VL N ++ W+ + VG+I+ IK E IP D VLLS+S+P
Sbjct: 119 EDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVGDIVIIKGKEYIPADTVLLSSSEPQ 178
Query: 223 GVAYLQTINLDGESNLKTRYAKQET--LLKVPEKETISGLIKCEKPNRNIYGFHANMEVD 280
+ Y++T NLDGE+NLK R T + + +SG I+CE PNR++Y F N+ +D
Sbjct: 179 AMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMRLSGRIECESPNRHLYDFVGNIRLD 238
Query: 281 GKR-LSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
G+ + LG ILLRG +L+NT W G+ VY G +TK+M NS+ P K S +E N +I
Sbjct: 239 GRSTVPLGADQILLRGAQLRNTQWVHGIVVYTGHDTKLMQNSTSPPLKLSNVERITNVQI 298
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
+ L L+A+ V S+ +A+W +RH+ +Y ++ G +N+ GL
Sbjct: 299 LILFCILIAMSLVCSVGSAIWNRRHSGR----DWYLNLNY---GGANNF-----GL---- 342
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
FL +I+F +IPISL +++E+V+ QAYF+ D M+ E + + R N+N +LGQ
Sbjct: 343 NFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAAMARTSNLNVELGQ 402
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
+KY+FSDKTGTLT N M+F+ +I G+ Y G +E +S
Sbjct: 403 VKYIFSDKTGTLTCNVMQFKKCTIAGVAY--GQNSQFGDEKTFS---------------- 444
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
D LL+ ++ N + +F +A C+T VP + + YQ SPDE AL
Sbjct: 445 DSSLLENLQN--NHPTAPIICEFLTMMAVCHTAVP------EREGDKIIYQAASPDEGAL 496
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 639
V AA F+ RT ++ID GQ + R+ +L + EF S RKRMSVI+ P + L+
Sbjct: 497 VRAAKQLNFVFTGRTPDSVIIDSLGQEE-RYELLNVLEFTSARKRMSVIVRTPSGKLRLY 555
Query: 640 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699
KGADT ++ +A+ I T HL +++ GLRTL + E+S S+F++W++ +
Sbjct: 556 CKGADTVIYDRLAETSKYKEI--TLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHR 613
Query: 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDK 759
AS ++ R L + +E NL +LGA+ IEDKLQ VPE IE+L A IK+W+LTGDK
Sbjct: 614 ASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDK 673
Query: 760 QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819
QETAI+IG+S KL M ++IN S + R++L S+ T+ G + E
Sbjct: 674 QETAINIGHSCKLRRKNMGMIVINEGSLDGTRETL------SRHCTTL-GDALRKEND-- 724
Query: 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSD 879
ALIIDG +L Y L + + LA +C V+CCRV+PLQK+ +V +VK +
Sbjct: 725 -----FALIIDGKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKV 779
Query: 880 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQR 939
+TLAIGDGANDVSMIQ A VGVGISG EG QA SSD+++ QF++L LL+VHG WNY R
Sbjct: 780 ITLAIGDGANDVSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNR 839
Query: 940 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKD 999
ILY FY+N VL + W+ F+ W LY+V++T++P + + I ++
Sbjct: 840 GSKCILYCFYKNIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERS 899
Query: 1000 LSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTI------ 1053
+ +L+ P+LY +NTK+FW+ + L+ SV++F+ P A T+
Sbjct: 900 CRKEYMLKYPELYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTVFENGRT 959
Query: 1054 -DVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMI-------IDA 1105
D +G+ VVI V + ++ WTW +H IWGSI ++ I +
Sbjct: 960 SDYLLLGNFVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPM 1019
Query: 1106 VPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAE 1161
P + G A + + +FW L+ I VA+L+ + K + + + V +E E
Sbjct: 1020 APDMSGEAAM--LFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1185 | ||||||
| 255546773 | 1226 | phospholipid-transporting atpase, putati | 0.983 | 0.950 | 0.810 | 0.0 | |
| 224100571 | 1228 | aminophospholipid ATPase [Populus tricho | 0.996 | 0.961 | 0.780 | 0.0 | |
| 359487112 | 1227 | PREDICTED: phospholipid-transporting ATP | 0.969 | 0.936 | 0.781 | 0.0 | |
| 356554785 | 1181 | PREDICTED: phospholipid-transporting ATP | 0.995 | 0.999 | 0.763 | 0.0 | |
| 224110076 | 1122 | aminophospholipid ATPase [Populus tricho | 0.944 | 0.997 | 0.796 | 0.0 | |
| 449446323 | 1176 | PREDICTED: phospholipid-transporting ATP | 0.961 | 0.968 | 0.763 | 0.0 | |
| 356523497 | 1181 | PREDICTED: phospholipid-transporting ATP | 0.980 | 0.983 | 0.763 | 0.0 | |
| 224100569 | 1154 | aminophospholipid ATPase [Populus tricho | 0.964 | 0.990 | 0.770 | 0.0 | |
| 358348449 | 1176 | Phospholipid-transporting ATPase [Medica | 0.963 | 0.971 | 0.767 | 0.0 | |
| 356510412 | 1203 | PREDICTED: phospholipid-transporting ATP | 0.946 | 0.932 | 0.774 | 0.0 |
| >gi|255546773|ref|XP_002514445.1| phospholipid-transporting atpase, putative [Ricinus communis] gi|223546441|gb|EEF47941.1| phospholipid-transporting atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1977 bits (5121), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 947/1168 (81%), Positives = 1051/1168 (89%), Gaps = 3/1168 (0%)
Query: 19 SSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARF 78
+S SRRS SS+ SRAS GNS+REVT GDLGSKPVRYGSRG DSEG S S KEI++EDAR
Sbjct: 61 NSMSRRSASSNHSRASGGNSVREVTFGDLGSKPVRYGSRGADSEGFSASLKEINDEDARL 120
Query: 79 VYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA 138
VY+NDP K+NE+FEF+GNSI+TGKYS+L+F+PRNLFEQFHRVAY+YFLVIAVLNQLPQLA
Sbjct: 121 VYLNDPEKTNERFEFSGNSIQTGKYSLLSFVPRNLFEQFHRVAYVYFLVIAVLNQLPQLA 180
Query: 139 VFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVG 198
VFGRG SILPLAFVL VTA+KDAYED+RRHRSDRIENNRLA VLVN+QFQ+KKWKD+RVG
Sbjct: 181 VFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVNDQFQQKKWKDVRVG 240
Query: 199 EIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETIS 258
EIIKI E++PCDMVLLSTSDPTGVAY+QTINLDGESNLKTRYAKQET+ K+PEKE I
Sbjct: 241 EIIKIHATESLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETISKIPEKEKIG 300
Query: 259 GLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM 318
GLIKCEKPNRNIYGFHANM++DGKRLSLGPSNI+LRGCELKNT+WA+G+AVY G+ETKVM
Sbjct: 301 GLIKCEKPNRNIYGFHANMDMDGKRLSLGPSNIILRGCELKNTAWAIGIAVYCGRETKVM 360
Query: 319 LNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKD 378
LNSSGAPSKRS LE MN EII LS FL+ALC++VS+CAAVWL+RH DEL+ MP+YR+KD
Sbjct: 361 LNSSGAPSKRSRLETRMNLEIIILSLFLIALCSIVSVCAAVWLRRHKDELNTMPFYRKKD 420
Query: 379 FSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMY 438
F++E + D+Y YYGWGLEILFTFLMSVIVFQ+MIPISLYISMELVR+GQAYFMI+D MY
Sbjct: 421 FNDEDQ-DDYNYYGWGLEILFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDKQMY 479
Query: 439 DEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSE 498
DEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+CASIWG+DYSGG A S
Sbjct: 480 DEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSGGKASSQDV 539
Query: 499 EVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558
V YS +VDGK LRPK+ V VDP LL LSRSGK TEE K V+DFFLALAACNTIVP+V D
Sbjct: 540 NVRYSGKVDGKTLRPKMKVKVDPQLLHLSRSGKVTEEAKRVHDFFLALAACNTIVPIVFD 599
Query: 559 -TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHE 617
SDP KL+DYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQG+RQ RF+VLGLHE
Sbjct: 600 DASDPTTKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGERQ-RFDVLGLHE 658
Query: 618 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRT 677
FDSDRKRMSVILG PDKTV +FVKGADTSMFSV+ ++LNMNVIR TE++LH YSS+GLRT
Sbjct: 659 FDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVMDRSLNMNVIRATEANLHTYSSMGLRT 718
Query: 678 LVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQG 737
LV+G RELS SEFEQW SFEAAS AL GRAA+LRKVASSVEN L ILGAS IEDKLQQG
Sbjct: 719 LVIGTRELSDSEFEQWHCSFEAASTALIGRAAMLRKVASSVENRLSILGASAIEDKLQQG 778
Query: 738 VPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDA 797
VPEAIESLR AGI+VWVLTGDKQETAISIGYSSKLLT+KMTQ+IINSNSKESCRKSLEDA
Sbjct: 779 VPEAIESLRTAGIRVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDA 838
Query: 798 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 857
+ +SKKL TV G + N SS A + Q+ALIIDGTSLVY+LDSEL+EQLF+LA CSVVL
Sbjct: 839 LVVSKKLTTVSGAAQNVGGSSAAAIGQVALIIDGTSLVYVLDSELEEQLFELASKCSVVL 898
Query: 858 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 917
CCRVAPLQKAGIVALVK RT+DMTLAIGDGANDVSMIQMADVGVGISG+EGRQAVM+SDF
Sbjct: 899 CCRVAPLQKAGIVALVKNRTADMTLAIGDGANDVSMIQMADVGVGISGKEGRQAVMASDF 958
Query: 918 AMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWS 977
AMGQFRFLV LLLVHGHWNYQRM YMILYNFYRNAV V VLF Y LFT+FTLTTAINEWS
Sbjct: 959 AMGQFRFLVPLLLVHGHWNYQRMSYMILYNFYRNAVFVLVLFCYTLFTSFTLTTAINEWS 1018
Query: 978 SVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQS 1037
SVLYSVIYT+LPTIVV ILDKDLSR TLL+ PQLYGAG R E YN+KLFW+TM DTLWQS
Sbjct: 1019 SVLYSVIYTALPTIVVGILDKDLSRSTLLKYPQLYGAGQRHESYNSKLFWVTMIDTLWQS 1078
Query: 1038 VVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATL 1097
V++F+PF AYW STID SIGDLWTLAVVILVN+HLAMD+IRWTWITHA IWG I+AT
Sbjct: 1079 AVVYFVPFFAYWASTIDAPSIGDLWTLAVVILVNLHLAMDIIRWTWITHAAIWGCIVATF 1138
Query: 1098 ICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIA 1157
ICV++ID+VP+L GYWAFFE+AKT FW CL+ I+VAAL+PRF+VK L+QY+ PCD+QI
Sbjct: 1139 ICVIVIDSVPTLVGYWAFFEIAKTAPFWLCLLAIVVAALLPRFVVKVLHQYFSPCDIQIT 1198
Query: 1158 REAEKVGNLRERGAGEIEMNPVLDPPQR 1185
REAEKVGN RE GA EIEMNP+LDPP+R
Sbjct: 1199 REAEKVGNRREFGAVEIEMNPILDPPRR 1226
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100571|ref|XP_002311928.1| aminophospholipid ATPase [Populus trichocarpa] gi|222851748|gb|EEE89295.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1913 bits (4955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 927/1188 (78%), Positives = 1040/1188 (87%), Gaps = 7/1188 (0%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGD 60
MD N TES+ +EI+ S+SRRS+SS+ SRASRGNSI + DLGSKPV GSR GD
Sbjct: 45 MDSQNPTESS-SSYEISLKSASRRSLSSNPSRASRGNSIGAGSFRDLGSKPVMLGSRRGD 103
Query: 61 SEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
SE S SQKEIS+EDAR VY+NDP KSNE+FEF GNS+ T KYS+++FIPRNLFEQFHRV
Sbjct: 104 SEVFSASQKEISDEDARLVYLNDPAKSNERFEFTGNSVHTAKYSLISFIPRNLFEQFHRV 163
Query: 121 AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLAN 180
AY+YFL+IAVLNQLPQLAVFGR SILPLAFVL VTA+KDA+ED+RRH SDRIEN+RLA
Sbjct: 164 AYVYFLIIAVLNQLPQLAVFGRTASILPLAFVLLVTAVKDAFEDWRRHMSDRIENSRLAW 223
Query: 181 VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
VLVN+QFQEKKWKDI+VGEIIKI+ N+T+PCDMVLLSTSD TGVAY+QTINLDGESNLKT
Sbjct: 224 VLVNDQFQEKKWKDIQVGEIIKIQANDTLPCDMVLLSTSDSTGVAYVQTINLDGESNLKT 283
Query: 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
RYAKQETL K+PEKE ISGLIKCEKPNRNIYGF ANM++DGKRLSLGPSNI+LRGCELKN
Sbjct: 284 RYAKQETLSKIPEKEKISGLIKCEKPNRNIYGFQANMDIDGKRLSLGPSNIILRGCELKN 343
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
TSWA+GVAVY G+ETK MLN+SGA SKRSWLE MNSEII LS FL+ALCTVVSI AAVW
Sbjct: 344 TSWAIGVAVYCGRETKAMLNNSGASSKRSWLETRMNSEIIVLSVFLIALCTVVSISAAVW 403
Query: 361 LKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISM 420
L RH DELD +P+YRRK F+E +P NY YYGW EI+FTFLMS+IVFQ+MIPISLYISM
Sbjct: 404 LGRHRDELDTIPFYRRKRFNE-ADPKNYNYYGWAAEIVFTFLMSIIVFQIMIPISLYISM 462
Query: 421 ELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480
ELVR+GQAYFMI+D+ MYDEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+C
Sbjct: 463 ELVRVGQAYFMIRDTQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 522
Query: 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540
AS+WG+DYS G A + +++ YSV+VDGKV+RPK+TV VDP LL+LSRS ++TEE KHV+
Sbjct: 523 ASVWGVDYSDGKANTQNQQARYSVKVDGKVVRPKMTVKVDPQLLELSRSERDTEEIKHVH 582
Query: 541 DFFLALAACNTIVPLVV-DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
DFFLALAACNTIVPL+V D SDP +KL+DYQGESPDEQAL YAAAAYGFML+ERTSGHIV
Sbjct: 583 DFFLALAACNTIVPLIVEDKSDPTMKLMDYQGESPDEQALAYAAAAYGFMLVERTSGHIV 642
Query: 600 IDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNV 659
IDI G+RQ RFNV GLHEFDSDRKRMSVILG PD V +FVKGAD+SM SVI ++LN NV
Sbjct: 643 IDIHGERQ-RFNVFGLHEFDSDRKRMSVILGCPDSIVRVFVKGADSSMLSVIDRSLNKNV 701
Query: 660 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 719
I+ T+ HLHAYSSLGLRTLV+GMR+LS SEFE+W SFEAAS A+ GRAALLRKVA +VE
Sbjct: 702 IQTTKGHLHAYSSLGLRTLVIGMRDLSESEFEEWHFSFEAASTAVVGRAALLRKVAGNVE 761
Query: 720 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779
+L ILGAS IEDKLQ+GVPEAIESLR AGIKVWVLTGDKQETAISIGYSSKLLT+KMTQ
Sbjct: 762 KSLTILGASAIEDKLQKGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 821
Query: 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILD 839
+IINSNS++SCRK LEDA+ MSK L TV S N+ SS A + +ALIIDGTSLVYILD
Sbjct: 822 IIINSNSRQSCRKCLEDALVMSKNLGTVSETSDNTGTSSEAARSLVALIIDGTSLVYILD 881
Query: 840 SELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 899
SEL+ QLFQLA TCSVVLCCRVAPLQKAGIVALVK RT+DMTL+IGDGANDVSMIQMADV
Sbjct: 882 SELEAQLFQLASTCSVVLCCRVAPLQKAGIVALVKKRTTDMTLSIGDGANDVSMIQMADV 941
Query: 900 GVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 959
GVGISGQEGRQAVM+SDF+MGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV VFVLF
Sbjct: 942 GVGISGQEGRQAVMASDFSMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVFVLF 1001
Query: 960 WYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1019
WY LF FTLTTAINEWSS+LYS+IYTSLPTIVVAI DKDLSRR LLQ PQLYGAG RQE
Sbjct: 1002 WYALFACFTLTTAINEWSSMLYSIIYTSLPTIVVAIFDKDLSRRNLLQYPQLYGAGQRQE 1061
Query: 1020 CYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVI 1079
Y+ KLFWLTM+DTLWQSVV+FF+P AYW STIDV SIGDLWTLAVVILVN+HLAMD+I
Sbjct: 1062 AYDRKLFWLTMSDTLWQSVVVFFVPLFAYWASTIDVPSIGDLWTLAVVILVNLHLAMDII 1121
Query: 1080 RWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPR 1139
RW WI HAVIWGSI+AT ICVMI+DA P GYWA F + FW CL II++AAL+PR
Sbjct: 1122 RWNWIFHAVIWGSIVATFICVMILDAFPMFAGYWAIFNIMGEGSFWVCLFIIIIAALLPR 1181
Query: 1140 FLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDP--PQR 1185
F+VK LYQY+ P D+QIAREAEK GNLR+ E+EMNP+++P P+R
Sbjct: 1182 FVVKVLYQYFTPDDIQIAREAEKFGNLRDIPV-EVEMNPIMEPSSPRR 1228
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359487112|ref|XP_002271241.2| PREDICTED: phospholipid-transporting ATPase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1909 bits (4945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1158 (78%), Positives = 1028/1158 (88%), Gaps = 9/1158 (0%)
Query: 33 ASRGNSIREVTLGDL-----GSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKS 87
ASRGNS+ ++ + GS+PVR+GSRG +S+G SMSQ+E+S+EDAR +YINDP KS
Sbjct: 74 ASRGNSVSGKSVSGVSFDLSGSRPVRHGSRGAESDGFSMSQRELSDEDARLIYINDPEKS 133
Query: 88 NEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSIL 147
NE++EFAGN++RTGKYSILTF+PRNLFEQFHR+AYIYFLVIA+LNQLPQLAVFGR S+L
Sbjct: 134 NERYEFAGNTVRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAILNQLPQLAVFGRTASVL 193
Query: 148 PLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNE 207
PLA VL VTAIKDAYED+RRHRSD+IENNR+A VL ++ FQEKKWK+IRVGEIIKI N+
Sbjct: 194 PLAIVLLVTAIKDAYEDWRRHRSDQIENNRMARVLGDDGFQEKKWKNIRVGEIIKISAND 253
Query: 208 TIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPN 267
T+PCD+VLLSTSDPTGVAY+QTINLDGESNLKTRYA+QET+ ++ +KE +SGLIKCEKP+
Sbjct: 254 TLPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYARQETISRMSQKERMSGLIKCEKPS 313
Query: 268 RNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSK 327
RNIYGF NMEVDGKRLSLGPSNI+LRGCELKNT+WA+GVAVY G+ETK MLN+SGAPSK
Sbjct: 314 RNIYGFQGNMEVDGKRLSLGPSNIVLRGCELKNTTWAIGVAVYCGRETKAMLNNSGAPSK 373
Query: 328 RSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387
RS LE HMN E + LS FL++LCT+VS+ AAVWL+RH DELDY+PYYRRK +++ G+P+N
Sbjct: 374 RSRLETHMNRETLFLSAFLISLCTIVSVLAAVWLRRHRDELDYLPYYRRKSYAK-GKPEN 432
Query: 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQ 447
Y YYGWG EI+FTFLMSVIVFQ+MIPISLYISMELVR+GQAYFMIQD+ +YDEAS+SRFQ
Sbjct: 433 YNYYGWGWEIVFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIQDNKLYDEASNSRFQ 492
Query: 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVD 507
CRALNINEDLGQIKYVFSDKTGTLTENKMEF+CASIWG+DY GG + GYSVQVD
Sbjct: 493 CRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYRGGTTCMQGD--GYSVQVD 550
Query: 508 GKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLV 567
G+V RPK+ V VD L +LS+SGK TEEGKH++DFFLALAACNTIVP+VVDTSDP V+L+
Sbjct: 551 GQVWRPKMKVKVDLELERLSKSGKQTEEGKHIHDFFLALAACNTIVPIVVDTSDPAVRLI 610
Query: 568 DYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSV 627
DYQGESPDEQALVYAAAAYGFML+ERTSGHIVID+ G+RQ RF+VLGLHEFDSDRKRMSV
Sbjct: 611 DYQGESPDEQALVYAAAAYGFMLMERTSGHIVIDVHGERQ-RFDVLGLHEFDSDRKRMSV 669
Query: 628 ILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSA 687
ILG PD TV +FVKGADTSMFS+I K NMN+IR TESHLH +SSLGLRTLVVGMR+L+
Sbjct: 670 ILGCPDNTVKVFVKGADTSMFSIIDKFSNMNIIRATESHLHNFSSLGLRTLVVGMRDLNG 729
Query: 688 SEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRA 747
SEFEQW+ +FE AS AL GRAALLRK+AS++ENNL ILGASGIEDKLQQGVPEAIESLR
Sbjct: 730 SEFEQWKFAFETASTALIGRAALLRKIASNIENNLSILGASGIEDKLQQGVPEAIESLRM 789
Query: 748 AGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTV 807
AGIKVWVLTGDKQETAISIGYSSKLLTS MT++IIN+NSKESC+KSLEDAI SK L T
Sbjct: 790 AGIKVWVLTGDKQETAISIGYSSKLLTSNMTRIIINNNSKESCKKSLEDAIVTSKTLMTQ 849
Query: 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKA 867
G+S N+E SG +ALIIDGTSLVY+LD EL+EQLFQLA CSVVLCCRVAPLQKA
Sbjct: 850 SGISQNTEGISGTAETPVALIIDGTSLVYVLDGELEEQLFQLASGCSVVLCCRVAPLQKA 909
Query: 868 GIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVT 927
GIVAL+K RT DMTLAIGDGANDVSMIQMADVG+GISGQEGRQAVM+SDFAMGQFRFLV
Sbjct: 910 GIVALIKKRTDDMTLAIGDGANDVSMIQMADVGIGISGQEGRQAVMASDFAMGQFRFLVP 969
Query: 928 LLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTS 987
LLLVHGHWNYQRMGYMILYNFYRNAV V VLFWYVL+T F++TTAINEWSSVLYSVIY+S
Sbjct: 970 LLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLYTCFSVTTAINEWSSVLYSVIYSS 1029
Query: 988 LPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGA 1047
+PTIVVAILDKDLS RTLL++PQLYG+GHRQECYN+KLFWLTM DT+WQS VIFF+P A
Sbjct: 1030 VPTIVVAILDKDLSSRTLLKHPQLYGSGHRQECYNSKLFWLTMLDTVWQSGVIFFVPLFA 1089
Query: 1048 YWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVP 1107
YW S +D SSIGDLWTLAVVILVNIHLAMDVIRWTWI HA IWGSI+AT ICV+IIDA+P
Sbjct: 1090 YWSSVVDGSSIGDLWTLAVVILVNIHLAMDVIRWTWIVHAAIWGSIVATCICVIIIDAIP 1149
Query: 1108 SLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLR 1167
SL GYWA F +AKT FW CL+ ILVAA++PRF+VK LYQY+ PCDVQIAREAEK G R
Sbjct: 1150 SLRGYWAIFHIAKTGSFWLCLLGILVAAVLPRFVVKVLYQYFTPCDVQIAREAEKFGYSR 1209
Query: 1168 ERGAGEIEMNPVLDPPQR 1185
E +IEMN +L+P QR
Sbjct: 1210 ELEGMQIEMNTILEPRQR 1227
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356554785|ref|XP_003545723.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1879 bits (4867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1186 (76%), Positives = 1026/1186 (86%), Gaps = 6/1186 (0%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRAS-RGNSIREVTLGDLGSKPVRYGSRGG 59
MD N E++ +SSSRRS S QSR+S R NS REV+ G GSKPVRYGS
Sbjct: 1 MDPNTPYENSSNFDSFMFNSSSRRSAMSIQSRSSVRDNSTREVSFGHSGSKPVRYGS--- 57
Query: 60 DSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHR 119
+SEGL+MSQKEIS+EDAR VY++DP ++N + EFAGNSIRTGKYSI TF+PRNLFEQFHR
Sbjct: 58 NSEGLNMSQKEISDEDARLVYVDDPERTNGRLEFAGNSIRTGKYSIFTFLPRNLFEQFHR 117
Query: 120 VAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLA 179
VAYIYFLVIA+LNQLPQ+AVFGRGVSI+PLAFVL VTA+KDA+ED+RRHRSD+IENNRLA
Sbjct: 118 VAYIYFLVIAILNQLPQIAVFGRGVSIMPLAFVLVVTAVKDAFEDWRRHRSDKIENNRLA 177
Query: 180 NVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239
VLVN QFQEKKWKD++VGE+IKI NETIPCD+VLLSTSDPTGVAY+QTINLDGESNLK
Sbjct: 178 LVLVNGQFQEKKWKDVKVGEVIKISANETIPCDVVLLSTSDPTGVAYVQTINLDGESNLK 237
Query: 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELK 299
TRYAKQET +P KE+++GLIKCEKPNRNIYGF MEVDGKRLSLG SNI++RGC+LK
Sbjct: 238 TRYAKQETQSTLPGKESLNGLIKCEKPNRNIYGFQGYMEVDGKRLSLGSSNIVIRGCQLK 297
Query: 300 NTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAV 359
NT+WALGVAVY G ETK MLNSSGAPSKRS LE MNSEII LSFFL+ALCTV S+CAAV
Sbjct: 298 NTNWALGVAVYCGGETKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCAAV 357
Query: 360 WLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYIS 419
WLK H DEL+ +PYYR+ D SE GE D+YKYYGWGLEI+FTFLMS+IVFQVMIPISLYIS
Sbjct: 358 WLKGHKDELNLLPYYRKLDVSE-GEEDSYKYYGWGLEIVFTFLMSIIVFQVMIPISLYIS 416
Query: 420 MELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479
MELVR+GQAYFMI DS MYD+A+ S FQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+
Sbjct: 417 MELVRVGQAYFMIGDSRMYDKATDSGFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 476
Query: 480 CASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHV 539
CASI G DYS A +E+V YSVQ GKV +PK+ V ++ LLQLS+ G EGK +
Sbjct: 477 CASILGFDYSSPKASLENEQVEYSVQAVGKVFKPKMMVKINQELLQLSKIGFANREGKQI 536
Query: 540 YDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
YDFFLALAACNTIVPLVVDTSDP VKL+DYQGESPDEQAL YAAAAYGFMLIERTSGHIV
Sbjct: 537 YDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIV 596
Query: 600 IDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNV 659
+DI G++Q RFNVLGLHEFDSDRKRMSVILG + +V LFVKGADTSM SVI K+LN ++
Sbjct: 597 VDIHGEKQ-RFNVLGLHEFDSDRKRMSVILGYNNNSVKLFVKGADTSMLSVIDKSLNTDI 655
Query: 660 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 719
++ TE+HLH+YSS+G RTLV+G+R+L ASEFEQW S+FEAAS AL GRAA+LRKVA + E
Sbjct: 656 LQATETHLHSYSSVGFRTLVIGVRDLDASEFEQWHSAFEAASTALIGRAAMLRKVAINAE 715
Query: 720 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779
NNLCILGA+ IEDKLQQGVPE+IESLR AGIKVWVLTGDKQ+TAISIGYSSKLLTS M
Sbjct: 716 NNLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQQTAISIGYSSKLLTSNMNL 775
Query: 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILD 839
+ IN+N++ESCR+ L+DA+ MS+K TVPGVSHNSE S A LALIIDGTSLVYILD
Sbjct: 776 ITINTNNRESCRRRLQDALVMSRKDMTVPGVSHNSEGRSDAVSTPLALIIDGTSLVYILD 835
Query: 840 SELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 899
SEL+E+LFQLA CSVVLCCRVAPLQKAGIVALVK RT DMTLAIGDGANDVSMIQMA V
Sbjct: 836 SELEEELFQLANRCSVVLCCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMAHV 895
Query: 900 GVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 959
GVGISGQEGRQAVM+SDFAMGQFRFLV LLL+HGHWNYQR+GYMI+YNFYRNA+ V VLF
Sbjct: 896 GVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLF 955
Query: 960 WYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1019
WYVLFTAFTLTTAINEWSSVLYS+IY++ PTIVV ILDKDLS+RTLL+ PQLYGAG RQE
Sbjct: 956 WYVLFTAFTLTTAINEWSSVLYSIIYSAFPTIVVGILDKDLSKRTLLKYPQLYGAGLRQE 1015
Query: 1020 CYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVI 1079
YN KLFWL MADTLWQS+ +FF P AYW++T+DV+SIGDLWTL+VVILVN+HLAMDVI
Sbjct: 1016 AYNKKLFWLAMADTLWQSIAVFFTPLIAYWETTVDVTSIGDLWTLSVVILVNLHLAMDVI 1075
Query: 1080 RWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPR 1139
RW WITHA IWGSI+AT ICV+IIDA+P+LPGYWA F A T LFW CL+ ++AAL+PR
Sbjct: 1076 RWNWITHAAIWGSIVATFICVIIIDAIPALPGYWAIFHAAGTGLFWLCLLGTVIAALLPR 1135
Query: 1140 FLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1185
+VK++YQYY+P D+QI+RE EK GN R+ G G+IEM PV D P R
Sbjct: 1136 LVVKYMYQYYFPSDIQISRETEKFGNPRDNGGGQIEMLPVSDGPPR 1181
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224110076|ref|XP_002315406.1| aminophospholipid ATPase [Populus trichocarpa] gi|222864446|gb|EEF01577.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1858 bits (4813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 894/1123 (79%), Positives = 996/1123 (88%), Gaps = 4/1123 (0%)
Query: 64 LSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYI 123
S SQKEIS+EDAR VY++DP KS+E+FEFAGNSIRT KYSI++FIPRNLFEQFHRVAYI
Sbjct: 2 FSASQKEISDEDARLVYLDDPAKSDERFEFAGNSIRTSKYSIISFIPRNLFEQFHRVAYI 61
Query: 124 YFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLV 183
YFL+IAVLNQLPQLAVFGRG SILPLAFVL VTA+KDAYED+RRH SDRIENNRLA VLV
Sbjct: 62 YFLIIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHMSDRIENNRLAWVLV 121
Query: 184 NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYA 243
N+QFQ+KKWKDI+VGEIIKI+ N+T+PCDMVLLSTSD TGVAY+QTINLDGESNLKTRYA
Sbjct: 122 NDQFQQKKWKDIQVGEIIKIQANDTLPCDMVLLSTSDSTGVAYVQTINLDGESNLKTRYA 181
Query: 244 KQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303
KQ+TL K+PEKE ISGLIKCEKPNRNIYGF ANM+VDGKRLSLGPSNI+LRGCELKNT W
Sbjct: 182 KQDTLSKIPEKEKISGLIKCEKPNRNIYGFQANMDVDGKRLSLGPSNIILRGCELKNTVW 241
Query: 304 ALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR 363
A+GVAVY G+ETK MLNSSGAPSKRSWLE MNSEII LS FL+ALCTVVS+ AAVWL+R
Sbjct: 242 AIGVAVYCGRETKAMLNSSGAPSKRSWLESRMNSEIIVLSVFLIALCTVVSVSAAVWLRR 301
Query: 364 HNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELV 423
H DELD MP+YRRKDFS+ GEP+NY YYGW EILFTFLMSVIVFQ+MIPISLYISMEL+
Sbjct: 302 HRDELDTMPFYRRKDFSD-GEPENYNYYGWVAEILFTFLMSVIVFQIMIPISLYISMELI 360
Query: 424 RLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASI 483
R+GQAY MI+D+ MYDEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+CAS
Sbjct: 361 RVGQAYLMIRDTQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASA 420
Query: 484 WGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFF 543
WGIDYS G + +++V YSV+V+G+ +RPK++V VDP LL+LS+SG +TEE KHV+DFF
Sbjct: 421 WGIDYSDGKVSTQNQQVRYSVEVEGRNVRPKMSVKVDPQLLELSKSGSDTEEVKHVHDFF 480
Query: 544 LALAACNTIVPLVVD-TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDI 602
LALAACNTIVPL+VD SDP KL+DYQGESPDEQAL YAAAAYGFMLIERTSGHI+IDI
Sbjct: 481 LALAACNTIVPLIVDDKSDPTAKLMDYQGESPDEQALAYAAAAYGFMLIERTSGHIIIDI 540
Query: 603 QGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRG 662
G+RQ RFNV GLHEFDSDRKRMSVILG PD TV +FVKGADTSMFSVI ++LN V+R
Sbjct: 541 HGERQ-RFNVFGLHEFDSDRKRMSVILGCPDSTVRVFVKGADTSMFSVIDRSLNTKVVRA 599
Query: 663 TESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNL 722
TE HLH YS+LGLRTLV+GMR+LS SEFE W SFEAAS A+ GRAALLRKVAS+VE NL
Sbjct: 600 TEGHLHTYSTLGLRTLVIGMRDLSDSEFEDWHFSFEAASTAVVGRAALLRKVASNVERNL 659
Query: 723 CILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVII 782
ILGAS IEDKLQQGVPEAIESLR AGIKVWVLTGDKQETAISIGYSSKLLT+KMTQ+II
Sbjct: 660 TILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 719
Query: 783 NSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSEL 842
NSNS+ESCR+ LEDA+ MSKKL+ V S N+ SS A +ALIIDGTSLVYILD+EL
Sbjct: 720 NSNSRESCRRCLEDALVMSKKLRAVSETSDNTGTSSEAARGSVALIIDGTSLVYILDNEL 779
Query: 843 DEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVG 902
+EQLFQLA TCSVVLCCRVAPLQKAGIVALVK RTS+MTL+IGDGANDVSMIQMADVGVG
Sbjct: 780 EEQLFQLASTCSVVLCCRVAPLQKAGIVALVKKRTSEMTLSIGDGANDVSMIQMADVGVG 839
Query: 903 ISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYV 962
ISGQEGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV VFVLFWY
Sbjct: 840 ISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVFVLFWYA 899
Query: 963 LFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYN 1022
LF FTLTTAINEWSS+LYS+IYTSLPTIVVAILDKDLSRR LL+ PQLYGAG RQE YN
Sbjct: 900 LFACFTLTTAINEWSSMLYSIIYTSLPTIVVAILDKDLSRRNLLKYPQLYGAGQRQEAYN 959
Query: 1023 TKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWT 1082
KLFWL M DT+WQS+V+FF+P AYW STIDV SIGDLWTLAVVILVN+HLAMD+IRW
Sbjct: 960 RKLFWLKMLDTVWQSLVVFFVPIFAYWASTIDVPSIGDLWTLAVVILVNLHLAMDIIRWN 1019
Query: 1083 WITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLV 1142
WI HAVIWGSI+AT ICVMI+DA P GYWA F + FW CL+ I++AAL+PRF+V
Sbjct: 1020 WIFHAVIWGSIVATFICVMILDAFPMFVGYWAIFHIMGEASFWVCLLGIIIAALLPRFVV 1079
Query: 1143 KFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1185
K LYQ++ P D+QIARE EK G+ R+ A E+EMNP+++PP R
Sbjct: 1080 KVLYQHFTPDDLQIAREVEKFGHQRDM-AVEVEMNPIMEPPPR 1121
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446323|ref|XP_004140921.1| PREDICTED: phospholipid-transporting ATPase 1-like [Cucumis sativus] gi|449494113|ref|XP_004159452.1| PREDICTED: phospholipid-transporting ATPase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1849 bits (4789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1144 (76%), Positives = 1004/1144 (87%), Gaps = 5/1144 (0%)
Query: 38 SIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNS 97
SIREV + GS+PVR+GSRGGDSE S+SQKEIS+EDAR +YI+DP K+NEKFEFA NS
Sbjct: 33 SIREVGSSEFGSRPVRHGSRGGDSEVFSISQKEISDEDARLIYIDDPEKTNEKFEFARNS 92
Query: 98 IRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTA 157
IRTGKYSILTF+PRNLFEQFHR+AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVL VTA
Sbjct: 93 IRTGKYSILTFLPRNLFEQFHRIAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLLVTA 152
Query: 158 IKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLS 217
+KDAYED+RRHRSD+IENNRLA+VLV+ QFQ KKWK+IRVGEIIKI N+TIPCDMVLLS
Sbjct: 153 VKDAYEDWRRHRSDKIENNRLASVLVDGQFQLKKWKNIRVGEIIKIGANDTIPCDMVLLS 212
Query: 218 TSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANM 277
TSD TGVAY+QT+NLDGESNLKTRYAKQET+ K+P+KE I GLIKCEKPNRNIYGFHANM
Sbjct: 213 TSDSTGVAYVQTLNLDGESNLKTRYAKQETMSKMPDKEKIVGLIKCEKPNRNIYGFHANM 272
Query: 278 EVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNS 337
E+DGKRLSLGP NI+LRGC+LKNTSWA+GVAVYAG+ETK MLNSSGAPSKRS LE MN
Sbjct: 273 EIDGKRLSLGPPNIVLRGCDLKNTSWAVGVAVYAGRETKAMLNSSGAPSKRSRLETRMNV 332
Query: 338 EIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEI 397
EI+ LSFFLVALCTVV + AAVW R+ + LD +PY+R KDFS+ P+ Y YYGWGLE
Sbjct: 333 EIVMLSFFLVALCTVVCVLAAVWFIRNRENLDILPYFRNKDFSKT-PPETYNYYGWGLEA 391
Query: 398 LFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDL 457
F FLMSVIVFQVMIPISLYISME+VR+GQAYFMI+D+ MYDE S+SRFQCRALNINEDL
Sbjct: 392 FFAFLMSVIVFQVMIPISLYISMEVVRVGQAYFMIRDTQMYDETSNSRFQCRALNINEDL 451
Query: 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTV 517
GQIKYVFSDKTGTLTENKMEFRCASIWG+DY G ++ E++GYSV+V+GKVLRPKL V
Sbjct: 452 GQIKYVFSDKTGTLTENKMEFRCASIWGVDYGGESSIPLDEQIGYSVRVNGKVLRPKLVV 511
Query: 518 NVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQ 577
DP LLQ SRSG++T +G++++DFFLALAACNTIVPL+ +TSDP+V+L+DYQGESPDEQ
Sbjct: 512 KTDPELLQFSRSGRHTRDGRYIHDFFLALAACNTIVPLITETSDPSVQLIDYQGESPDEQ 571
Query: 578 ALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVT 637
ALVYAAAAYGFMLIERTSGHIVIDI G++ R+NVLG+HEFDSDRKRMSVILG PD T
Sbjct: 572 ALVYAAAAYGFMLIERTSGHIVIDIHGEKH-RYNVLGMHEFDSDRKRMSVILGCPDTTFK 630
Query: 638 LFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 697
+FVKGAD SMF V+ + LN N+I+ T++HL++YSS GLRTLV+GM+ELS+S+F++W F
Sbjct: 631 VFVKGADNSMFKVMGENLNTNIIQSTKAHLYSYSSKGLRTLVIGMKELSSSDFDKWHMMF 690
Query: 698 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTG 757
E AS AL GRAA LRKVASS+ENNL ILGASGIEDKLQ+GVPEAIE+LR AGIKVWVLTG
Sbjct: 691 EEASTALIGRAAKLRKVASSIENNLFILGASGIEDKLQKGVPEAIEALRTAGIKVWVLTG 750
Query: 758 DKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERS 817
DKQETAISIGYSSKLLT+KMTQ+IINSNS ESC++ LEDAI MSK T G S ++ERS
Sbjct: 751 DKQETAISIGYSSKLLTNKMTQIIINSNSAESCKRKLEDAIIMSK---TASGASLDNERS 807
Query: 818 SGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT 877
+ +ALIIDG+SLV+ILDS+L+EQLFQL+ CSVVLCCRVAPLQKAGIVALVK RT
Sbjct: 808 TEVVTTSIALIIDGSSLVHILDSKLEEQLFQLSCNCSVVLCCRVAPLQKAGIVALVKKRT 867
Query: 878 SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNY 937
SDMTLAIGDGANDVSMIQ ADVGVGISG EGRQAVM+SDFAMGQFRFLV LLLVHGHWNY
Sbjct: 868 SDMTLAIGDGANDVSMIQKADVGVGISGLEGRQAVMASDFAMGQFRFLVPLLLVHGHWNY 927
Query: 938 QRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILD 997
QRMGYMILYNFYRNAV V VLFWYVLFT ++LTTAIN+WSSVLYS+IYT LPTI+V ILD
Sbjct: 928 QRMGYMILYNFYRNAVFVLVLFWYVLFTGYSLTTAINQWSSVLYSIIYTCLPTIIVGILD 987
Query: 998 KDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSS 1057
KDL RRTLL PQLYGAGHRQE YN++LFWLTM DT+WQS+ IFFIP A+W + +D+S
Sbjct: 988 KDLGRRTLLSYPQLYGAGHRQESYNSRLFWLTMIDTVWQSIAIFFIPLFAFWATNVDISG 1047
Query: 1058 IGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFE 1117
+GDLW LA VI+VN+HL+MDV+RW THAVIWGS +AT+ICV+++D++ SLPGYWA +
Sbjct: 1048 LGDLWLLATVIVVNLHLSMDVVRWYNFTHAVIWGSTLATVICVIVLDSILSLPGYWAIYH 1107
Query: 1118 VAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMN 1177
VA T FW CL+ I+VAAL+PRF+VK+LYQYY PCD+QIAREA+K G RE G + EM
Sbjct: 1108 VASTASFWLCLLCIIVAALLPRFVVKYLYQYYCPCDIQIAREADKFGLTRELGVVQTEMI 1167
Query: 1178 PVLD 1181
PVL+
Sbjct: 1168 PVLN 1171
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356523497|ref|XP_003530374.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1840 bits (4766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 892/1168 (76%), Positives = 1020/1168 (87%), Gaps = 6/1168 (0%)
Query: 19 SSSSRRSISSSQSRAS-RGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDAR 77
+SSS RS S QSR+S R NS REV+ G GSKPVR+GS +SEGLSMSQKEIS+EDAR
Sbjct: 19 NSSSPRSDMSIQSRSSGRDNSTREVSFGHTGSKPVRHGS---NSEGLSMSQKEISDEDAR 75
Query: 78 FVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL 137
VY++DP K+NE+ +FAGNSIRTGKYSI TF+PRNLFEQF RVAYIYFLVIA+LNQLPQL
Sbjct: 76 LVYVDDPEKTNERLKFAGNSIRTGKYSIFTFLPRNLFEQFRRVAYIYFLVIAILNQLPQL 135
Query: 138 AVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRV 197
AVFGRGVSI+PL FVL VTA+KDA+ED+R+HRSD+IENNRLA VLVN QFQEKKWKD+RV
Sbjct: 136 AVFGRGVSIMPLTFVLVVTAVKDAFEDWRKHRSDKIENNRLALVLVNGQFQEKKWKDVRV 195
Query: 198 GEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETI 257
GE+IKI NETIPCD+VLLSTSDPTGVAY+QTINLDGESNLKTRY KQET PEKE +
Sbjct: 196 GEVIKISANETIPCDIVLLSTSDPTGVAYVQTINLDGESNLKTRYTKQETQSMFPEKERL 255
Query: 258 SGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317
+GLI CEKPNRNIYGF ME+DGKRLSLG SNI++RGC+LKNT+WALGVAVY G+ETK
Sbjct: 256 NGLIVCEKPNRNIYGFQGYMEIDGKRLSLGSSNIVIRGCQLKNTNWALGVAVYCGRETKA 315
Query: 318 MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRK 377
MLNSSGAPSKRS LE MNSEII LSFFL+ALCTV S+C AVWLKRH DEL+ PYYR+
Sbjct: 316 MLNSSGAPSKRSLLETRMNSEIIMLSFFLIALCTVTSVCVAVWLKRHKDELNLSPYYRKM 375
Query: 378 DFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHM 437
D SE GE D+YKYYGW LEI+FTFLMS+IVFQ+MIPISLYISMELVR+GQAYFMI+DS M
Sbjct: 376 DVSE-GEEDSYKYYGWVLEIVFTFLMSIIVFQIMIPISLYISMELVRVGQAYFMIRDSRM 434
Query: 438 YDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHS 497
YD+A+ S FQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+CASI G DYS +
Sbjct: 435 YDKATDSGFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSAKMGPEN 494
Query: 498 EEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVV 557
E+V YSVQ DGKV +PK+ V V+ LLQLS+SG EGK +YDFFLALAACNTIVPLVV
Sbjct: 495 EQVEYSVQEDGKVFKPKMRVKVNQELLQLSKSGFANREGKQIYDFFLALAACNTIVPLVV 554
Query: 558 DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHE 617
DTSDP VKL+DYQGESPDEQAL YAAAAYGFMLIERTSGHIV++I G++Q RFNVLGLHE
Sbjct: 555 DTSDPMVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVVNIHGEKQ-RFNVLGLHE 613
Query: 618 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRT 677
FDSDRKRM+VILG + +V LFVKGADTSMFSVI K+LN ++++ TE+HLH+YSS+GLRT
Sbjct: 614 FDSDRKRMTVILGYSNNSVKLFVKGADTSMFSVIDKSLNSDILQATETHLHSYSSVGLRT 673
Query: 678 LVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQG 737
LV+GMR+L+ASEFEQW S+FEAAS AL GRA++LRKVA +VENNLCILGA+ IEDKLQQG
Sbjct: 674 LVIGMRDLNASEFEQWHSAFEAASTALIGRASMLRKVAINVENNLCILGATAIEDKLQQG 733
Query: 738 VPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDA 797
VPE+IESLR AGIKVWVLTGDKQ+TAISIG SSKLLTS MTQ+IIN+N++ESCR+ L+DA
Sbjct: 734 VPESIESLRTAGIKVWVLTGDKQQTAISIGCSSKLLTSNMTQIIINTNNRESCRRCLQDA 793
Query: 798 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 857
+ MS+K TVPGV+HNSE S A LALIIDGTSLVYILDSEL+E+LFQLA CSVVL
Sbjct: 794 LVMSRKHMTVPGVTHNSEGRSDAVSTPLALIIDGTSLVYILDSELEEELFQLANRCSVVL 853
Query: 858 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 917
CCRVAPLQKAGIVALVK RT DMTLAIGDGANDVSMIQMA VGVGISGQEGRQAVM+SDF
Sbjct: 854 CCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMAHVGVGISGQEGRQAVMASDF 913
Query: 918 AMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWS 977
A+GQFR LV LLL+HGHWNYQR+GYMI+YNFYRNA+ V VLFWYVLFTAF+LTTAINEWS
Sbjct: 914 AIGQFRLLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFWYVLFTAFSLTTAINEWS 973
Query: 978 SVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQS 1037
SVLYS+IY+++PTIVV +LDKDLS+RTLL++PQLYGAG RQE YN KLFWL+MADTLWQS
Sbjct: 974 SVLYSIIYSAVPTIVVGVLDKDLSKRTLLKHPQLYGAGLRQEAYNKKLFWLSMADTLWQS 1033
Query: 1038 VVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATL 1097
+ +FF P AYW +T DV+SIGDLWTL+VVILVN+HLAMDVIRW WITHA IWGSI+AT
Sbjct: 1034 IAVFFTPLIAYWGTTEDVASIGDLWTLSVVILVNLHLAMDVIRWNWITHAAIWGSIVATF 1093
Query: 1098 ICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIA 1157
IC++IIDA+P+ PG+WA F A T LFW CL+ ++AAL+PR +VK++ QYY+P D+QI+
Sbjct: 1094 ICIIIIDAIPAFPGFWAIFHAAGTGLFWLCLLGTVIAALLPRLVVKYMNQYYFPSDIQIS 1153
Query: 1158 REAEKVGNLRERGAGEIEMNPVLDPPQR 1185
REAEK GN R+ G G+IEM PV D R
Sbjct: 1154 REAEKFGNPRDNGVGQIEMLPVSDGSPR 1181
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100569|ref|XP_002311927.1| aminophospholipid ATPase [Populus trichocarpa] gi|222851747|gb|EEE89294.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1832 bits (4745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 895/1161 (77%), Positives = 1012/1161 (87%), Gaps = 18/1161 (1%)
Query: 26 ISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPV 85
IS +Q + GNS+REV R+GSRGGD E L +SQKEI ++DAR VY+NDPV
Sbjct: 11 ISLNQRKG--GNSVREV----------RHGSRGGDIELLGLSQKEIGDDDARLVYLNDPV 58
Query: 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVS 145
KSNE++EFAGNSIRT KYS+ +F+PRNLF QFHRVAYIYFL+IAVLNQLPQLAVFGRG S
Sbjct: 59 KSNERYEFAGNSIRTSKYSVFSFLPRNLFRQFHRVAYIYFLIIAVLNQLPQLAVFGRGAS 118
Query: 146 ILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKT 205
I+PLAFVLSVTA+KDAYED+RRHRSDR+ENNRLA VLV+++F++KKWKDI+VGEI+KI+
Sbjct: 119 IMPLAFVLSVTAVKDAYEDWRRHRSDRVENNRLAWVLVDDEFRQKKWKDIQVGEILKIQA 178
Query: 206 NETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEK 265
NET PCD+VLLSTS+PTGVA++QT+NLDGESNLKTRYAKQET+ K+P +E I+GLIKCE+
Sbjct: 179 NETFPCDIVLLSTSEPTGVAFVQTVNLDGESNLKTRYAKQETISKIPGEEMINGLIKCER 238
Query: 266 PNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAP 325
PNRNIYGF ANMEVDGKRLSLGPSNILLRGCELKNT+WA+GVAVY G+ETK MLNSSGAP
Sbjct: 239 PNRNIYGFQANMEVDGKRLSLGPSNILLRGCELKNTAWAIGVAVYCGRETKAMLNSSGAP 298
Query: 326 SKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEP 385
SKRS LE HMN E I LS FL+ LC+VVSICAAVWL+R DELD +P+YRRKDF+ G P
Sbjct: 299 SKRSQLETHMNFETIILSLFLIFLCSVVSICAAVWLRRRKDELDILPFYRRKDFAH-GAP 357
Query: 386 DNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSR 445
N+ YYGWGLEI FTFLMSVIVFQ+MIPISLYISMELVR+GQAYFMI+D +YDE S+SR
Sbjct: 358 QNFNYYGWGLEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDMLLYDEGSNSR 417
Query: 446 FQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQ 505
FQCR+LNINEDLGQIKYVFSDKTGTLTENKMEF+ ASIWG+DYS G S ++ +
Sbjct: 418 FQCRSLNINEDLGQIKYVFSDKTGTLTENKMEFQRASIWGVDYSDGRTVSRNDP---AQA 474
Query: 506 VDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD-TSDPNV 564
VDGK+L+PK+ V VDP LL+LSRSGK+T+ KHV+DF LALAACNTIVPLVVD TSD V
Sbjct: 475 VDGKILQPKMEVKVDPQLLELSRSGKDTKGAKHVHDFLLALAACNTIVPLVVDDTSDSTV 534
Query: 565 KLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKR 624
KL+DYQGESPDEQAL YAAAAYGFML ERTSGHIVI+IQG+RQ RFNVLGLHEFDSDRKR
Sbjct: 535 KLLDYQGESPDEQALAYAAAAYGFMLTERTSGHIVINIQGERQ-RFNVLGLHEFDSDRKR 593
Query: 625 MSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRE 684
MSVILG PDKTV +FVKGADTSMFSVI ++LN N+I TE+HL YSS+GLRTLV G+RE
Sbjct: 594 MSVILGCPDKTVKVFVKGADTSMFSVIDRSLNTNIIHATEAHLQTYSSMGLRTLVFGIRE 653
Query: 685 LSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIES 744
L+ SEFEQW +FEAAS A+ GRAALLRKVA++VEN+L ILGAS IEDKLQQGVPEAIES
Sbjct: 654 LNNSEFEQWHLTFEAASTAIIGRAALLRKVANNVENSLTILGASAIEDKLQQGVPEAIES 713
Query: 745 LRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKL 804
LR AGIK WVLTGDKQETAISIGYSSKLLTSKMT +IINSNSK+S RKSLEDA+ SKKL
Sbjct: 714 LRTAGIKAWVLTGDKQETAISIGYSSKLLTSKMTSIIINSNSKQSSRKSLEDALVASKKL 773
Query: 805 KTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL 864
G++HN+ S A V +ALIIDGTSLV+ILDSEL+E LF+LA CSVVLCCRVAPL
Sbjct: 774 TITSGITHNTGASDAAAVNPVALIIDGTSLVHILDSELEELLFELASKCSVVLCCRVAPL 833
Query: 865 QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF 924
QKAGIVALVK RT DMTLAIGDGANDVSMIQMADVGVGISG+EG+QAVM+SDFAMGQFRF
Sbjct: 834 QKAGIVALVKNRTRDMTLAIGDGANDVSMIQMADVGVGISGREGQQAVMASDFAMGQFRF 893
Query: 925 LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVI 984
LV LLLVHGHWNYQRMGYMILYNFYRNAV V VLFWYV+FT+FTLTTAI EWSS+LYS+I
Sbjct: 894 LVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVIFTSFTLTTAITEWSSMLYSII 953
Query: 985 YTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIP 1044
YT+LPTIVV ILDKDLSRRTLL+ PQLYGAGHRQE YN+KLFWLTM DTLWQSV +F IP
Sbjct: 954 YTALPTIVVGILDKDLSRRTLLKYPQLYGAGHRQEAYNSKLFWLTMIDTLWQSVAVFSIP 1013
Query: 1045 FGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIID 1104
AYW S+ID SSIGDLWTLAVVILVN+HLAMD+ RW+WITHAV+WGSIIAT ICV++ID
Sbjct: 1014 LFAYWASSIDGSSIGDLWTLAVVILVNLHLAMDIFRWSWITHAVLWGSIIATFICVIVID 1073
Query: 1105 AVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVG 1164
AVP GYWA F VAKT LFW CL+ I++AALIPR++VKFLYQYY PCD+QIAREAEK G
Sbjct: 1074 AVPIFTGYWAIFHVAKTELFWLCLLAIVLAALIPRYVVKFLYQYYSPCDIQIAREAEKFG 1133
Query: 1165 NLRERGAGEIEMNPVLDPPQR 1185
+ RE +IE NP+L P R
Sbjct: 1134 SPREPRNTKIETNPILGSPHR 1154
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358348449|ref|XP_003638259.1| Phospholipid-transporting ATPase [Medicago truncatula] gi|355504194|gb|AES85397.1| Phospholipid-transporting ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1821 bits (4718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 879/1146 (76%), Positives = 1011/1146 (88%), Gaps = 4/1146 (0%)
Query: 41 EVTLGDLGSKPVRYGSRGG-DSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIR 99
EVT G SKPVRYGS+G DSE SMSQKEIS+EDAR +Y++DP ++NE+FEFAGNS+R
Sbjct: 33 EVTFGHSESKPVRYGSKGAVDSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVR 92
Query: 100 TGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159
TGKYS +TF+PRNLFEQFHRVAYIYFL+IA+LNQLPQLAVFGRGVSILPLAFVL VTA+K
Sbjct: 93 TGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVK 152
Query: 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219
DAYED+RRHRSD++ENNRL VLVN F EKKWKDIRVGEIIKI NE IPCD VLLSTS
Sbjct: 153 DAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTS 212
Query: 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEV 279
DPTGVAY+QT+NLDGESNLKTRYAKQET K EKE SGLIKCEKPNRNIYGF A MEV
Sbjct: 213 DPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEV 272
Query: 280 DGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
D KRLSLG SNI+LRGCELKNT+ +GVAVY G+ETK MLN+SGAPSKRS LE MNSEI
Sbjct: 273 DEKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEI 332
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
I LSFFLVALC+V S+CAAVWLKR+ +EL+ +PYYR+ DFS+ G+ ++Y+YYGWG+EILF
Sbjct: 333 IMLSFFLVALCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSK-GKEESYQYYGWGVEILF 391
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
TFLMSVIV+QVMIPISLYISMELVR+GQAYFMI+DS +YDEA++SRFQCRALNINEDLGQ
Sbjct: 392 TFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQ 451
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
IKYVFSDKTGTLTENKMEF+CASIWG+DYS +E+V YS+QV+GKVL+PK+ V V
Sbjct: 452 IKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKPSLENEQVEYSLQVNGKVLKPKMKVKV 511
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
+ LL+L++SG +++GK +YDFFLALAACNTIVPLVVDT+DP VKL+DYQGESPDEQAL
Sbjct: 512 NQELLRLAKSGFASKDGKRIYDFFLALAACNTIVPLVVDTADPTVKLIDYQGESPDEQAL 571
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 639
YAAAAYGFMLIERTSGHI+IDI G++Q RFNVLGLHEFDSDRKRMSVILG D V LF
Sbjct: 572 TYAAAAYGFMLIERTSGHIMIDIHGEQQ-RFNVLGLHEFDSDRKRMSVILGCNDNLVKLF 630
Query: 640 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699
VKGADTSMFSVI K+LN ++I+ TE+HLH+YSS+GLRTLV+GMR L+ASEF+QW +FEA
Sbjct: 631 VKGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRNLNASEFDQWHFAFEA 690
Query: 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDK 759
AS ++ GRAALLRKVA++VENNLCILGA+ IEDKLQQGVPE+IESLR AGIKVWVLTGDK
Sbjct: 691 ASTSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPESIESLRKAGIKVWVLTGDK 750
Query: 760 QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819
QETAISIGYSSKLLTS MTQ I SN++ESCR+ L+DA+ MS+K T P V + E SS
Sbjct: 751 QETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVTAPEVGNYIEGSSD 810
Query: 820 AGVAQ-LALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS 878
V+ +ALIIDGTSLVYILDSEL+E+LF+LA CSVVLCCRVAPLQKAGIV+LVK RT+
Sbjct: 811 GVVSTPMALIIDGTSLVYILDSELEEELFELARRCSVVLCCRVAPLQKAGIVSLVKNRTA 870
Query: 879 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQ 938
DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVM+SDFAMGQFRFLV LL VHGHWNYQ
Sbjct: 871 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQ 930
Query: 939 RMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDK 998
R+GYM+LYNFYRNAV V +LFWYVLFTAFTLTTAINEWSS+LYS+IYT++PTIVVAI DK
Sbjct: 931 RLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDK 990
Query: 999 DLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSI 1058
DLS+RTLLQ+PQLYGAG RQE YN KLFWLT+ADTLWQSVV+FF+P AYW ST+D++S+
Sbjct: 991 DLSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSVVVFFVPLFAYWGSTVDIASM 1050
Query: 1059 GDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEV 1118
GDLWT+++VILVN+HLAMDVIRWTWI+HA IWGSIIAT ICVM++DA+PSL GYWA F+V
Sbjct: 1051 GDLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDV 1110
Query: 1119 AKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNP 1178
A T LFW CL+ IL+AAL+PRF+VKF+YQYY P D+QI+RE EK N R G +IEM
Sbjct: 1111 ASTALFWLCLLGILIAALLPRFVVKFIYQYYCPDDIQISREIEKFENRRVNGDRQIEMLH 1170
Query: 1179 VLDPPQ 1184
+ +P +
Sbjct: 1171 ISNPQR 1176
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356510412|ref|XP_003523932.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1808 bits (4684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 879/1135 (77%), Positives = 991/1135 (87%), Gaps = 13/1135 (1%)
Query: 50 KPVRYGSRGG-DSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTF 108
KPVRYGS+GG DSEGLSMSQ+E+ +EDAR VYIN+P K+NE FEFA NSIRT KYS+LTF
Sbjct: 77 KPVRYGSKGGADSEGLSMSQRELRDEDARLVYINEPFKTNEAFEFAANSIRTSKYSLLTF 136
Query: 109 IPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRH 168
IPRNLFEQFHRVAY+YFL+IA+LNQLPQLAVFGR VSILPLAFVL VTA+KD YED+RRH
Sbjct: 137 IPRNLFEQFHRVAYVYFLIIAILNQLPQLAVFGRTVSILPLAFVLFVTAVKDVYEDWRRH 196
Query: 169 RSDRIENNRLANVLVNN--QFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAY 226
++D++ENNRLA+V+V+ F EKKW+D+RVGE+IKIK NETIPCD VLLSTSDPTGVAY
Sbjct: 197 QNDKVENNRLASVMVDGGRSFVEKKWRDVRVGEVIKIKANETIPCDTVLLSTSDPTGVAY 256
Query: 227 LQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSL 286
+QTINLDGESNLKTRYAKQET KE G+IKCEKPNRNIYGF ANMEVDGK+LSL
Sbjct: 257 VQTINLDGESNLKTRYAKQET----HGKEGFGGVIKCEKPNRNIYGFLANMEVDGKKLSL 312
Query: 287 GPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFL 346
G SNI+LRGCELKNTSWA+GVAVY G ETK MLN+SGAPSKRS LE MNSEII LSFFL
Sbjct: 313 GSSNIVLRGCELKNTSWAIGVAVYCGSETKAMLNNSGAPSKRSRLETCMNSEIIWLSFFL 372
Query: 347 VALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVI 406
VALCTV S+C AVWLKRH DEL+ +PYYR+ DFSE G+ D+Y+YYGWGLEI FTFLMSVI
Sbjct: 373 VALCTVTSVCVAVWLKRHKDELNLLPYYRKLDFSE-GDVDSYEYYGWGLEIFFTFLMSVI 431
Query: 407 VFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSD 466
VFQVMIPISLYISMELVR+GQAYFM QD MYDEA+ SRFQCRALNINEDLGQIKYVFSD
Sbjct: 432 VFQVMIPISLYISMELVRVGQAYFMFQDKRMYDEATKSRFQCRALNINEDLGQIKYVFSD 491
Query: 467 KTGTLTENKMEFRCASIWGIDYSG--GNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLL 524
KTGTLT+NKMEF+CASIWG+DYS N+ E V +SV+VDGKV RPK+ V V+P LL
Sbjct: 492 KTGTLTQNKMEFQCASIWGVDYSSKENNSMERDEVVEHSVKVDGKVFRPKMKVKVNPELL 551
Query: 525 QLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAA 584
QLSRSG EGK ++DFFLA+A CNTIVPLVVDT DP+VKL+DYQGESPDEQAL YAAA
Sbjct: 552 QLSRSGLQNVEGKRIHDFFLAMATCNTIVPLVVDTPDPDVKLIDYQGESPDEQALAYAAA 611
Query: 585 AYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGAD 644
AYGFML ERTSGHIVIDI GQRQ +FNVLGLHEFDSDRKRMSVILG PD +V +FVKGAD
Sbjct: 612 AYGFMLTERTSGHIVIDIHGQRQ-KFNVLGLHEFDSDRKRMSVILGYPDNSVKVFVKGAD 670
Query: 645 TSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNAL 704
TSM +VI K+ M+++R TE+HLH+YSS+GLRTLV+GMR+L+ASEFEQW SFEAAS A+
Sbjct: 671 TSMLNVIDKSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHGSFEAASTAV 730
Query: 705 FGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAI 764
FGRA +L KV+S VENNL ILGAS IEDKLQQ VPE+IESLR AGIKVWVLTGDKQETAI
Sbjct: 731 FGRAVMLHKVSSIVENNLTILGASAIEDKLQQCVPESIESLRIAGIKVWVLTGDKQETAI 790
Query: 765 SIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQ 824
SIGYSSKLLTS MTQ+IINS ++ESCRKSL+DA+ MSKKL + V++N+ SS A
Sbjct: 791 SIGYSSKLLTSNMTQIIINSKNRESCRKSLQDALVMSKKLMSTSDVANNAGGSSHA--TP 848
Query: 825 LALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAI 884
+ALIIDGTSLV+ILDSEL+EQLFQLA CSVVLCCRVAPLQKAGIVALVK RTSD+TLAI
Sbjct: 849 VALIIDGTSLVHILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKNRTSDLTLAI 908
Query: 885 GDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMI 944
GDGANDVSMIQMADVGVGISGQEGRQAVM+SDFAMGQFRFLV LLL+HGHWNYQR+GYMI
Sbjct: 909 GDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMI 968
Query: 945 LYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRT 1004
LYNFYRNAVLV VLFWYVL+TAFTLTTAINEWSS LYS+IY+SLPTI+V ILDKD+ +RT
Sbjct: 969 LYNFYRNAVLVLVLFWYVLYTAFTLTTAINEWSSTLYSIIYSSLPTIIVGILDKDVGKRT 1028
Query: 1005 LLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTL 1064
LL+ PQLYGAG R YN KLF LTM DTLWQS+VIF+ P AYW ST+DV+SIGDLWTL
Sbjct: 1029 LLKYPQLYGAGQRHVAYNKKLFLLTMLDTLWQSMVIFWAPLFAYWSSTVDVASIGDLWTL 1088
Query: 1065 AVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLF 1124
VVILVN+HLAMDVIRW W+THAVIWGSI+AT I VMIIDA+P+LPGYWAFF+ A T LF
Sbjct: 1089 GVVILVNLHLAMDVIRWYWVTHAVIWGSIVATFISVMIIDAIPNLPGYWAFFDAAGTGLF 1148
Query: 1125 WFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPV 1179
W L+ I+VAAL+PR +V+F+YQYY+P D+QI REAEK+G R +G IEM P+
Sbjct: 1149 WLLLLGIIVAALLPRLVVRFVYQYYFPNDIQICREAEKIGYERVVESGHIEMLPI 1203
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1185 | ||||||
| TAIR|locus:3355727 | 1158 | ALA1 "aminophospholipid ATPase | 0.638 | 0.653 | 0.743 | 1.5e-305 | |
| UNIPROTKB|F1S3S6 | 1424 | ATP10D "Uncharacterized protei | 0.518 | 0.431 | 0.384 | 2.9e-210 | |
| UNIPROTKB|Q9P241 | 1426 | ATP10D "Probable phospholipid- | 0.510 | 0.424 | 0.388 | 3.7e-210 | |
| UNIPROTKB|F1MZ89 | 1499 | Bt.13793 "Uncharacterized prot | 0.506 | 0.400 | 0.394 | 1.6e-209 | |
| UNIPROTKB|E2RG44 | 1423 | ATP10D "Uncharacterized protei | 0.506 | 0.421 | 0.393 | 1.8e-208 | |
| UNIPROTKB|F1MSL3 | 1423 | ATP10D "Uncharacterized protei | 0.508 | 0.423 | 0.388 | 2.3e-208 | |
| ZFIN|ZDB-GENE-101102-1 | 1524 | atp10a "ATPase, class V, type | 0.351 | 0.273 | 0.429 | 5.8e-208 | |
| RGD|1588541 | 1364 | Atp10d "ATPase, class V, type | 0.511 | 0.444 | 0.388 | 1.6e-207 | |
| MGI|MGI:2450125 | 1416 | Atp10d "ATPase, class V, type | 0.507 | 0.424 | 0.385 | 3.7e-206 | |
| UNIPROTKB|J9PB95 | 1460 | ATP10A "Uncharacterized protei | 0.329 | 0.267 | 0.436 | 3.3e-203 |
| TAIR|locus:3355727 ALA1 "aminophospholipid ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2932 (1037.2 bits), Expect = 1.5e-305, P = 1.5e-305
Identities = 565/760 (74%), Positives = 653/760 (85%)
Query: 40 REVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIR 99
+EVT GDLGSK +R+GS G DSE LSMSQKEI +EDAR +YINDP ++NE+FEF GNSI+
Sbjct: 31 KEVTFGDLGSKRIRHGSAGADSEMLSMSQKEIKDEDARLIYINDPDRTNERFEFTGNSIK 90
Query: 100 TGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159
T KYS+ TF+PRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRG SI+PLAFVL V+AIK
Sbjct: 91 TAKYSVFTFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASIMPLAFVLLVSAIK 150
Query: 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219
DAYED+RRHRSDR+ENNRLA V ++QF+EKKWK IRVGE+IK+++N+T+PCDMVLL+TS
Sbjct: 151 DAYEDFRRHRSDRVENNRLALVFEDHQFREKKWKHIRVGEVIKVQSNQTLPCDMVLLATS 210
Query: 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEV 279
DPTGV Y+QT NLDGESNLKTRYAKQETLLK + E+ +G IKCEKPNRNIYGF ANME+
Sbjct: 211 DPTGVVYVQTTNLDGESNLKTRYAKQETLLKAADMESFNGFIKCEKPNRNIYGFQANMEI 270
Query: 280 DGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEI 339
DG+RLSLGPSNI+LRGCELKNT+WALGV VYAG ETK MLN+SGAPSKRS LE MN EI
Sbjct: 271 DGRRLSLGPSNIILRGCELKNTAWALGVVVYAGGETKAMLNNSGAPSKRSRLETRMNLEI 330
Query: 340 IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399
I LS FL+ LCT+ + AAVWL+ H D+LD + +YRRKD+SE NYKYYGWG EI F
Sbjct: 331 ILLSLFLIVLCTIAAATAAVWLRTHRDDLDTILFYRRKDYSERPGGKNYKYYGWGWEIFF 390
Query: 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459
TF M+VIV+Q+MIPISLYISMELVR+GQAYFM D MYDE+S S FQCRALNINEDLGQ
Sbjct: 391 TFFMAVIVYQIMIPISLYISMELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQ 450
Query: 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV 519
IKY+FSDKTGTLT+NKMEF+CA I G+DYS + SE GYS++VDG +L+PK+ V V
Sbjct: 451 IKYLFSDKTGTLTDNKMEFQCACIEGVDYSDREP-ADSEHPGYSIEVDGIILKPKMRVRV 509
Query: 520 DPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL 579
DP LLQL+++GK TEE K +FFL+LAACNTIVP+V +TSDPNVKLVDYQGESPDEQAL
Sbjct: 510 DPVLLQLTKTGKATEEAKRANEFFLSLAACNTIVPIVSNTSDPNVKLVDYQGESPDEQAL 569
Query: 580 VYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 639
VYAAAAYGF+LIERTSGHIVI+++G+ Q RFNVLGLHEFDSDRKRMSVILG PD +V LF
Sbjct: 570 VYAAAAYGFLLIERTSGHIVINVRGETQ-RFNVLGLHEFDSDRKRMSVILGCPDMSVKLF 628
Query: 640 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699
VKGAD+SMF V+ ++ VI T+ LHAYSS GLRTLVVGMREL+ SEFEQW SSFEA
Sbjct: 629 VKGADSSMFGVMDESYG-GVIHETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEA 687
Query: 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDK 759
AS AL GRA LLRKVA ++E NL I+GA+ IEDKLQ+GVPEAIESLR AGIKVWVLTGDK
Sbjct: 688 ASTALIGRAGLLRKVAGNIETNLRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDK 747
Query: 760 QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIA 799
QETAISIG+SS+LLT M Q++INSNS +SCR+SLE+A A
Sbjct: 748 QETAISIGFSSRLLTRNMRQIVINSNSLDSCRRSLEEANA 787
|
|
| UNIPROTKB|F1S3S6 ATP10D "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1111 (396.2 bits), Expect = 2.9e-210, Sum P(3) = 2.9e-210
Identities = 249/647 (38%), Positives = 367/647 (56%)
Query: 562 PNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSD 621
P+ + Y+ ESPDE ALVYAA AY L RT +V+D F +L + FDS
Sbjct: 717 PSASSLCYEAESPDEAALVYAARAYQCTLQSRTPEQVVVDFAALGPLTFQLLHILPFDSV 776
Query: 622 RKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYS 671
RKRMSV++ P V ++ KGAD+ + +++ A M + T+ HL Y+
Sbjct: 777 RKRMSVVVRHPLSNQVVVYTKGADSVIMELLSGASPDGPSLEKQQMMIREKTQKHLDDYA 836
Query: 672 SLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 731
GLRTL + + +S +E+ +W S A ++ + LL + A +EN L +LGA+GIE
Sbjct: 837 KQGLRTLCIAKKVMSDTEYAEWLRSHFLAETSIDNKEELLLESAMRLENKLTLLGATGIE 896
Query: 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCR 791
D+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL I+N+ +K++C
Sbjct: 897 DRLQEGVPESIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTETKDACE 956
Query: 792 KSLEDAIA-MSKKLKTVP--G-VSHNSERSSGAGVAQL--ALIIDGTSLVYILDSELDEQ 845
++ + + K P G +S +S++ G L LII G +L + L L Q
Sbjct: 957 VLMDTILKELQGKNPAAPERGPLSEDSQQPPGPQDPGLRAGLIITGRTLEFALQESLQRQ 1016
Query: 846 LFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG 905
+L C V+CCR PLQK+ +V LV+ MTLAIGDGANDVSMIQ+AD+G+GISG
Sbjct: 1017 FLELTACCRAVVCCRATPLQKSEVVKLVRGHLRVMTLAIGDGANDVSMIQVADIGIGISG 1076
Query: 906 QEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXT 965
QEG QAVM+SDFA+ QF+ L LLLVHGHW Y R+ MILY FY+N
Sbjct: 1077 QEGMQAVMASDFAISQFKHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWYQFFC 1136
Query: 966 AFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKL 1025
F+ T+ + W + +++++TS P ++ +L+KD+S LLQ P+LY +G R E Y
Sbjct: 1137 GFSGTSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAEMLLQLPELYRSGQRSEAYLPHT 1196
Query: 1026 FWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWIT 1085
FW+T+ D +QS+V FF+P+ Y S ID+ + G+ A + ++ +HL ++ TWI
Sbjct: 1197 FWITLLDAFYQSLVCFFVPYYTYQGSDIDIFAFGNPLNTAALFIILLHLVIESKSLTWIH 1256
Query: 1086 HAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPR 1139
VI GSI+ + + A+ PS P YW +F+ ++ AL+PR
Sbjct: 1257 MLVIVGSILCYFLFALAFGAMCVTCNPPSNP-YWIMQAHMLDPVFYLVCVLTTCIALLPR 1315
Query: 1140 FLVKFLYQYYYPCDV-------QIAREAEKVGNLRERGAGEIEMNPV 1179
F+ + L +P + ++ E K + RGAG+ M+PV
Sbjct: 1316 FIYRVLQGSLFPSPILRAKHFDRLTAEERKEALKKWRGAGK--MDPV 1360
|
|
| UNIPROTKB|Q9P241 ATP10D "Probable phospholipid-transporting ATPase VD" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1111 (396.2 bits), Expect = 3.7e-210, Sum P(3) = 3.7e-210
Identities = 250/643 (38%), Positives = 369/643 (57%)
Query: 569 YQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVI 628
Y+ ESPDE ALVYAA AY L RT +++D F +L + FDS RKRMSV+
Sbjct: 723 YEAESPDEAALVYAARAYQCTLRSRTPEQVMVDFAALGPLTFQLLHILPFDSVRKRMSVV 782
Query: 629 LGLP-DKTVTLFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYSSLGLRTL 678
+ P V ++ KGAD+ + +++ A M V T+ HL Y+ GLRTL
Sbjct: 783 VRHPLSNQVVVYTKGADSVIMELLSVASPDGASLEKQQMIVREKTQKHLDDYAKQGLRTL 842
Query: 679 VVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGV 738
+ + +S +E+ +W + A ++ R LL + A +EN L +LGA+GIED+LQ+GV
Sbjct: 843 CIAKKVMSDTEYAEWLRNHFLAETSIDNREELLLESAMRLENKLTLLGATGIEDRLQEGV 902
Query: 739 PEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAI 798
PE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL I+N+ SK++C + +
Sbjct: 903 PESIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQSKDACGMLMSTIL 962
Query: 799 A-MSKKLKTVPGVSHNSE--------RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQL 849
+ KK + +P SE R SG + LII G +L + L L +Q +L
Sbjct: 963 KELQKKTQALPEQVSLSEDLLQPPVPRDSGL---RAGLIITGKTLEFALQESLQKQFLEL 1019
Query: 850 AGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGR 909
C V+CCR PLQK+ +V LV++ MTLAIGDGANDVSMIQ+AD+G+G+SGQEG
Sbjct: 1020 TSWCQAVVCCRATPLQKSEVVKLVRSHLQVMTLAIGDGANDVSMIQVADIGIGVSGQEGM 1079
Query: 910 QAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXTAFTL 969
QAVM+SDFA+ QF+ L LLLVHGHW Y R+ MILY FY+N F+
Sbjct: 1080 QAVMASDFAVSQFKHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWYQFFCGFSG 1139
Query: 970 TTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLT 1029
T+ + W + +++++TS P ++ +L+KD+S TL+Q P+LY +G + E Y FW+T
Sbjct: 1140 TSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQLPELYRSGQKSEAYLPHTFWIT 1199
Query: 1030 MADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVI 1089
+ D +QS+V FF+P+ Y S D+ + G+ A + +V +HL ++ TWI VI
Sbjct: 1200 LLDAFYQSLVCFFVPYFTYQGSDTDIFAFGNPLNTAALFIVLLHLVIESKSLTWIHLLVI 1259
Query: 1090 WGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVK 1143
GSI++ + ++ A+ PS P YW E +F+ ++ AL+PRF+ +
Sbjct: 1260 IGSILSYFLFAIVFGAMCVTCNPPSNP-YWIMQEHMLDPVFYLVCILTTSIALLPRFVYR 1318
Query: 1144 FLYQYYYPCDVQIARE------AEKVGNLRE-RGAGEIEMNPV 1179
L +P + A+ E+ L++ RGAG+ MN V
Sbjct: 1319 VLQGSLFPSPILRAKHFDRLTPEERTKALKKWRGAGK--MNQV 1359
|
|
| UNIPROTKB|F1MZ89 Bt.13793 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1107 (394.7 bits), Expect = 1.6e-209, Sum P(3) = 1.6e-209
Identities = 246/623 (39%), Positives = 360/623 (57%)
Query: 561 DPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDS 620
+P +L Y+ ESPDE ALV+AA AY L+ R + +++ + F +L FDS
Sbjct: 697 EPGAEL-RYEAESPDEAALVHAARAYSCALVGRLHDQVSVELPHLGRLTFELLHTLGFDS 755
Query: 621 DRKRMSVILGLP-DKTVTLFVKGADTSMFSVI-------AKALNMNVIRG-TESHLHAYS 671
RKRMSV++ P + ++ KGAD+ + ++ A+ + IR T+++L+ Y+
Sbjct: 756 IRKRMSVVIRHPLTDEINVYTKGADSVVMDLLLPCSTDDARGRHQMKIRSKTQNYLNLYA 815
Query: 672 SLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 731
GLRTL + R LS E+ W S A +A+ R LL + A +E NL +LGA+GIE
Sbjct: 816 VEGLRTLCIAKRVLSKEEYACWLQSHLEAESAVDNREELLFQSAIRLETNLHLLGATGIE 875
Query: 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCR 791
D+LQ GVPE I LR AG+++WVLTGDKQETA++I ++ KLL + +N+ S+E+C
Sbjct: 876 DRLQDGVPETIAKLRQAGLQIWVLTGDKQETAVNIAHACKLLDHDEEVITLNAESQEACE 935
Query: 792 KSLEDAI--AMSKK-LKTVPGVSHNSER---SSGAGVAQLALIIDGTSLVYILDSELDEQ 845
L+ + S+ +T +S S A + +L+IDG SL Y L L+++
Sbjct: 936 ALLDQCLRYVQSRSPQRTAGSLSVGFAPLCPPSEATASGPSLVIDGRSLAYALQKNLEDK 995
Query: 846 LFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG 905
LA C VLCCR PLQK+ +V LV+++ MTLAIGDGANDVSMIQ+ADVGVGISG
Sbjct: 996 FLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIGDGANDVSMIQVADVGVGISG 1055
Query: 906 QEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXT 965
QEG QAVM+SDFA+ +FR+L LL+VHGHW Y R+ M+LY FY+N
Sbjct: 1056 QEGMQAVMASDFAVPKFRYLERLLIVHGHWCYSRLANMVLYFFYKNTMFVGLLFWFQFYC 1115
Query: 966 AFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKL 1025
F+ + I++W + ++++++SLP +V +LDKD+ LL PQLY +G E Y +
Sbjct: 1116 GFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDVPADVLLAEPQLYRSGQNMEEYRPRT 1175
Query: 1026 FWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWIT 1085
FWL MAD +QS+V FFIP+ AY+DS D+ + G T + +HL ++ WTW+
Sbjct: 1176 FWLNMADAAFQSLVCFFIPYLAYYDSDTDIFTWGTPITAVALFTFLLHLGIETKTWTWLN 1235
Query: 1086 HAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPR 1139
S++ +I +A PS P YW + +F+ ++ VAAL+PR
Sbjct: 1236 WTACGFSVVLFFTVALIYNASCATCYPPSNP-YWTMQTLMGDPVFYSICLLAPVAALLPR 1294
Query: 1140 FLVKFLYQYYYPCDVQIAREAEK 1162
K L +P +Q+ R+ K
Sbjct: 1295 LFFKALQGTLFPTPLQLGRQLAK 1317
|
|
| UNIPROTKB|E2RG44 ATP10D "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1121 (399.7 bits), Expect = 1.8e-208, Sum P(3) = 1.8e-208
Identities = 246/625 (39%), Positives = 364/625 (58%)
Query: 562 PNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSD 621
P+ + Y+ ESPDE ALVYAA AY L R+ +V+D F +L + FDS
Sbjct: 716 PSAAPLCYEAESPDEAALVYAARAYRCTLQSRSPEQLVVDFAALGPLTFQLLHILPFDSV 775
Query: 622 RKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRG-TESHLHAYS 671
RKRMSV++ P V ++ KGAD+ + +++ A +IR T+ HL Y+
Sbjct: 776 RKRMSVVVRHPLSNQVVVYTKGADSVIMELLSVASPDGASREKQQMIIREKTQKHLDDYA 835
Query: 672 SLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 731
GLRTL + + +S +E+E+W + A ++ R LL + A +EN L +LGA+GIE
Sbjct: 836 RRGLRTLCIAKKVMSDTEYEEWLRNHFLAETSIDHREELLLESAVRLENKLTLLGATGIE 895
Query: 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCR 791
D+LQ+GVPE+IE+L+ AGIK+W+LTGDKQETA++I Y+ KLL I+N+ SK++C
Sbjct: 896 DRLQEGVPESIEALQRAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQSKDACE 955
Query: 792 -------KSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDE 844
K L + S +V S + G+G+ + LII G +L + L L
Sbjct: 956 MLMSTILKELREKNPASNARTSVSEGLPQSPATQGSGL-RAGLIITGKTLEFALQESLQG 1014
Query: 845 QLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS 904
+L C V+CCR PLQK+ +V LV++ MTLAIGDGANDVSMIQ+ADVG+GIS
Sbjct: 1015 PFLELTACCQAVICCRATPLQKSEVVKLVRSHLRVMTLAIGDGANDVSMIQVADVGIGIS 1074
Query: 905 GQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXX 964
GQEG QAVM+SDFA+ QF+ L LLLVHGHW Y R+ MILY FY+N
Sbjct: 1075 GQEGMQAVMASDFAISQFKHLGKLLLVHGHWCYARLANMILYFFYKNVAYVNLLFWYQFF 1134
Query: 965 TAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTK 1024
F+ T+ + W +L+++++TS P ++ +L+KD+S TL+Q P+LY G + E Y
Sbjct: 1135 CGFSGTSMTDYWVLILFNLLFTSAPPVIYGVLEKDVSAETLMQLPELYKRGQKSEAYLPL 1194
Query: 1025 LFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWI 1084
FW+T+ D +QS+V FF+P+ Y S ID+ + G+ A + ++ +HL ++ TWI
Sbjct: 1195 TFWITLLDAFYQSLVCFFMPYYTYQGSDIDIFTFGNPLNTAALFIIILHLVIESKSLTWI 1254
Query: 1085 THAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIP 1138
VI GSI++ L+ ++ A+ PS P YW E +F+ ++ AL+P
Sbjct: 1255 HMLVIVGSILSYLVFALVFGAMCVTCNPPSNP-YWIMQEHMLDPVFYLVCVLTTCVALLP 1313
Query: 1139 RFLVKFLYQYYYPCDVQIAREAEKV 1163
RF+ + L +P V A+ +++
Sbjct: 1314 RFIYRVLQGSLFPSPVLRAQHLDRL 1338
|
|
| UNIPROTKB|F1MSL3 ATP10D "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1101 (392.6 bits), Expect = 2.3e-208, Sum P(3) = 2.3e-208
Identities = 249/641 (38%), Positives = 366/641 (57%)
Query: 569 YQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVI 628
Y+ ESPDE ALVYAA AY L RT +V+D F +L + FDS RKRMSV+
Sbjct: 722 YEAESPDEAALVYAARAYQCTLQSRTPEQVVVDFAALGPLTFQLLHILPFDSVRKRMSVV 781
Query: 629 LGLP-DKTVTLFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYSSLGLRTL 678
+ P V ++ KGAD+++ +++ A M + T+ HL Y+ GLRTL
Sbjct: 782 VRHPLSNQVVVYTKGADSAIMELLSVASPDGPGLEKQQMMIREKTQKHLDDYAKRGLRTL 841
Query: 679 VVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGV 738
+ R +S +E+ +W + A ++ R LL + A +EN L +LGA+GIED+LQ+GV
Sbjct: 842 CIAKRVMSDTEYAEWLRNHFLAETSIDNREELLLESAMRLENKLTLLGATGIEDRLQEGV 901
Query: 739 PEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAI 798
PEAIE+L AGIK+W+LTGDKQETA++I Y+ KLL ++N+ SK +C + L D I
Sbjct: 902 PEAIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPNDKLFVLNTESKNAC-EMLMDTI 960
Query: 799 AMSKKLKTVPGVSHNSERSS----------GAGVAQLALIIDGTSLVYILDSELDEQLFQ 848
K+L+ P + S+ G+G+ + ALII G +L + L L +Q +
Sbjct: 961 L--KELQKNPASPEQASLSASLHQPPPTLQGSGL-RAALIITGKTLEFALQESLQKQFLE 1017
Query: 849 LAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEG 908
L C V+CCR PLQK+ +V LV++ MTLAIGDGANDVSMIQ+AD+G+GISGQEG
Sbjct: 1018 LTARCQAVVCCRATPLQKSEVVKLVRSHLRVMTLAIGDGANDVSMIQVADIGIGISGQEG 1077
Query: 909 RQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXTAFT 968
QAVM+SDFA+ QFR L LLLVHGHW Y R+ MILY FY+N F+
Sbjct: 1078 MQAVMASDFAVSQFRHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWYQFFCGFS 1137
Query: 969 LTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWL 1028
T+ + W + +++++TS P ++ +L+KD+S TL+Q P+LY +G R E Y FW+
Sbjct: 1138 GTSMTDYWVLIFFNLLFTSAPPVIYGVLEKDVSAETLMQLPELYRSGQRSEAYLPLTFWI 1197
Query: 1029 TMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLA-MDVIRWTWITHA 1087
T+ D +QS+V FF+P+ Y S + + G + ++ HL+ ++ TWI
Sbjct: 1198 TLLDAFYQSLVCFFVPYYVYEGSDCRIDTFGYYLRKLSLFIILYHLSHLESPSMTWIHML 1257
Query: 1088 VIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFL 1141
VI GSI+ + A+ PS P YW E +F+ ++ AL+PRF+
Sbjct: 1258 VIAGSILCYFCFALAFGAMCVTCNPPSNP-YWIMQEHMADPVFYLVCVLTTCVALLPRFI 1316
Query: 1142 VKFLYQYYYPCDVQIAREA------EKVGNLRE-RGAGEIE 1175
+ L +P + A+ E++ L++ RG G+++
Sbjct: 1317 YRVLQGSLFPSPILRAKHLDRLPAEERIEALKKWRGTGQMD 1357
|
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| ZFIN|ZDB-GENE-101102-1 atp10a "ATPase, class V, type 10A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 885 (316.6 bits), Expect = 5.8e-208, Sum P(4) = 5.8e-208
Identities = 188/438 (42%), Positives = 279/438 (63%)
Query: 68 QKEISEEDARFVYIN---DPVKS--NEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAY 122
+K E R V+ N D K N +A N I+T KY++L+F+P+NLFEQFHR A
Sbjct: 22 RKSKKESKTRTVHANILYDHTKGGDNPNRHYANNKIKTTKYTLLSFLPKNLFEQFHRFAN 81
Query: 123 IYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVL 182
+YF+ IA+LN +P + F +++ P+ F+LSVTAIKD +EDYRRHRSD+ N+ V
Sbjct: 82 VYFVFIALLNFVPVVNAFQPELALAPVVFILSVTAIKDLWEDYRRHRSDKEINHMDCLVY 141
Query: 183 VNNQ--FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
++ + EK WK++RVG+ I+++ NE +P D++LLSTSDP + +++T LDGE+NLK
Sbjct: 142 CRSEKRYVEKYWKELRVGDFIRLRCNEILPADVLLLSTSDPDRLCHIETATLDGETNLKQ 201
Query: 241 RYAKQETLLKVPEKETI--SGLIKCEKPNRNIYGFHANM-EVDGKRLSLGPSNILLRGCE 297
R + + E + + + +I+CEKPN ++ F + G+R L N+LLRGC
Sbjct: 202 RQVVRSFIDLDCEFDPLKYNSVIECEKPNNDLNRFRGYIIHRSGRRDGLYKDNLLLRGCT 261
Query: 298 LKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICA 357
++NT A+G+ +YAG ETK MLN++G KRS LE MN ++ L+ +C +I
Sbjct: 262 IRNTEEAVGIVIYAGHETKAMLNNNGPRYKRSKLERQMNVDVFWCVIILLVMCLFSAIGH 321
Query: 358 AVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLY 417
+W+ ++ D +R F G P+ + + ++ FL +IVFQV+IPISL+
Sbjct: 322 GLWMFQYGD--------KRPVFDVLG-PEGTELSPV-VSAIYLFLTMIIVFQVLIPISLF 371
Query: 418 ISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 477
+S+E+V++ Q YF+ QD +YDE + S QCRALNI EDLGQ++Y+FSDKTGTLTENKM
Sbjct: 372 VSIEIVKICQVYFIHQDLELYDEETDSHLQCRALNITEDLGQMQYIFSDKTGTLTENKMV 431
Query: 478 FRCASIWGIDYS-GGNAR 494
FR ++ G++YS NAR
Sbjct: 432 FRRCTVAGVEYSHDANAR 449
|
|
| RGD|1588541 Atp10d "ATPase, class V, type 10D" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1103 (393.3 bits), Expect = 1.6e-207, Sum P(3) = 1.6e-207
Identities = 244/628 (38%), Positives = 365/628 (58%)
Query: 557 VDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLH 616
+D P + Y+ ESPDE ALVYAA AY L RT +V+D F +L +
Sbjct: 712 LDGPPPLASNLCYEAESPDEAALVYAARAYHCTLRSRTPEQVVVDFAALGPLTFQLLHIL 771
Query: 617 EFDSDRKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKA----LNMN----VIRG-TESH 666
FDS RKRMSV++ P K V ++ KGAD+ + +++ A N+ VIR T+ H
Sbjct: 772 PFDSVRKRMSVVVRHPLSKQVVVYTKGADSVIMELLSVASSDGTNLEDQQMVIRERTQRH 831
Query: 667 LHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILG 726
L Y+ GLRTL V + +S +E+ +W + A ++ R LL + A +EN L +LG
Sbjct: 832 LDEYAKRGLRTLCVAKKVMSDTEYAEWLRNHFLAETSIDNREELLVESAMRLENKLTLLG 891
Query: 727 ASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNS 786
A+GIED+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL I+N+ S
Sbjct: 892 ATGIEDRLQEGVPESIEALHKAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQS 951
Query: 787 KESCRKSLEDAIA-MSKKLKTVPGVSH---NSERSSGAGV-AQLALIIDGTSLVYILDSE 841
+++C + + + K+ + P ++ N + V + L+I G +L + L
Sbjct: 952 EDACGMLMSAILEELQKRTQVSPELASPRKNFPQPPDPQVPGRAGLVITGKTLEFALQES 1011
Query: 842 LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 901
L +Q +L C V+CCR PLQK+ +V LV+ MTLAIGDGANDVSMIQ+AD+G+
Sbjct: 1012 LQKQFLELTAWCQAVICCRATPLQKSEVVKLVRNHLHVMTLAIGDGANDVSMIQVADIGI 1071
Query: 902 GISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXX 961
G+SGQEG QAVM+SDFA+ QFR L LLLVHGHW Y R+ MILY FY+N
Sbjct: 1072 GVSGQEGMQAVMASDFAISQFRHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWY 1131
Query: 962 XXXTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECY 1021
F+ T+ + W + +++++TS+P I+ +L+KD+S TLLQ P+LY +G R E Y
Sbjct: 1132 QFFCGFSGTSMTDYWVLIFFNLLFTSVPPIIYGVLEKDVSAETLLQLPELYQSGQRSEEY 1191
Query: 1022 NTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRW 1081
FW+T+ D +QS+V FF+P+ Y S ID+ + G+ A ++++ +HL ++
Sbjct: 1192 LPLTFWITLLDAFYQSLVCFFVPYFTYQGSDIDIFTFGNPLNTAALLIILLHLVIESKSL 1251
Query: 1082 TWITHAVIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAA 1135
TWI VI GSI++ + A+ PS P Y + +F+ ++ A
Sbjct: 1252 TWIHMLVIVGSILSYFFFALAFGALCVTCNPPSNP-YGIMQKHMLDPVFYLVCVLTTCVA 1310
Query: 1136 LIPRFLVKFLYQYYYPCDVQIAREAEKV 1163
L+PRF+ + L +P + A+ +++
Sbjct: 1311 LLPRFVYRVLQGSVFPSPILRAKYFDRL 1338
|
|
| MGI|MGI:2450125 Atp10d "ATPase, class V, type 10D" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1101 (392.6 bits), Expect = 3.7e-206, Sum P(3) = 3.7e-206
Identities = 240/622 (38%), Positives = 361/622 (58%)
Query: 562 PNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSD 621
P+ + Y+ ESPDE ALVYAA AY L RT +++D F +L + FDS
Sbjct: 715 PSASNLCYEAESPDEAALVYAARAYRCTLQSRTPEQVMVDFAALGSLTFQLLHILPFDSV 774
Query: 622 RKRMSVILGLP-DKTVTLFVKGADTSMFSVIAKALN--MN-----VIRG-TESHLHAYSS 672
RKRMSV++ P K V ++ KGAD+ + +++ A + N +IR T+ HL Y+
Sbjct: 775 RKRMSVVVRHPLSKQVVVYTKGADSVIMELLSVAASDGTNPEQQMIIRERTQRHLDEYAK 834
Query: 673 LGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIED 732
GLRTL V + +S +E+ +W + A ++ R LL + A +EN L +LGA+GIED
Sbjct: 835 RGLRTLCVAKKVMSDTEYAEWLRNHFLAETSIDNREELLVESAMRLENKLTLLGATGIED 894
Query: 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRK 792
+LQ+GVPE+IE+L AGIK+W+LTGDKQETA++I Y+ KLL I+N+ S+++C
Sbjct: 895 RLQEGVPESIEALHQAGIKIWMLTGDKQETAVNIAYACKLLEPDDKLFILNTQSQDACGM 954
Query: 793 SLEDAIA-MSKKLKTVPGVSHNSER----SSGAGVAQLALIIDGTSLVYILDSELDEQLF 847
+ + + K+ + P ++ + + S G + L+I G +L + L L Q
Sbjct: 955 LMSAILEELQKRAQVSPELASSRKNFPQPSDAQGQGRAGLVITGKTLEFALQESLQRQFL 1014
Query: 848 QLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 907
+L C V+CCR PLQK+ +V LV+ +TL IGDGANDVSMIQ+AD+G+G+SGQE
Sbjct: 1015 ELTAWCQAVICCRATPLQKSEVVKLVRNHHHVLTLPIGDGANDVSMIQVADIGIGVSGQE 1074
Query: 908 GRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAXXXXXXXXXXXXTAF 967
G QAVM+SDFA+ QFR L LLLVHGHW Y R+ MILY FY+N F
Sbjct: 1075 GMQAVMASDFAISQFRHLSKLLLVHGHWCYTRLSNMILYFFYKNVAYVNLLFWYQFFCGF 1134
Query: 968 TLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFW 1027
+ T+ + W + +++++TS+P I+ +L+KD+S TLLQ P+LY +G R E Y FW
Sbjct: 1135 SGTSMTDYWVLIFFNLLFTSVPPIIYGVLEKDVSAETLLQLPELYRSGQRSEEYLPLTFW 1194
Query: 1028 LTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHA 1087
+T+ D +QS+V FF+P+ Y S ID+ + G+ A + ++ +HL ++ TWI
Sbjct: 1195 ITLLDAFYQSLVCFFVPYFTYQGSDIDIFTFGNPLNTAALFIILLHLVIESKSLTWIHML 1254
Query: 1088 VIWGSIIATLICVMIIDAV------PSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFL 1141
V GSI++ + A+ PS P Y + +F+ ++ AL+PRFL
Sbjct: 1255 VTVGSILSYFFFALAFGALCVTCNPPSNP-YGIMRKHMLDPVFYLVCVLTTFVALLPRFL 1313
Query: 1142 VKFLYQYYYPCDVQIAREAEKV 1163
+ L +P V A+ +++
Sbjct: 1314 YRVLQGSVFPSPVLRAKYFDRL 1335
|
|
| UNIPROTKB|J9PB95 ATP10A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 875 (313.1 bits), Expect = 3.3e-203, Sum P(4) = 3.3e-203
Identities = 178/408 (43%), Positives = 267/408 (65%)
Query: 94 AGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVL 153
A N ++T KY++L+F+P+NLFEQFHR+A +YF+ IA+LN +P + F G+++ P+ F+L
Sbjct: 68 ADNRLKTTKYTLLSFLPKNLFEQFHRLANVYFVFIALLNFVPAVNAFQPGLALAPVLFIL 127
Query: 154 SVTAIKDAYEDYRRHRSDRIENNRLANVLVNN---QFQEKKWKDIRVGEIIKIKTNETIP 210
+VTA KD +EDY RHRSD E N L ++ + Q+ + WK+IRVG+ ++++ NE IP
Sbjct: 128 AVTAFKDLWEDYSRHRSDH-EINHLGCLVFSREEKQYVNRFWKEIRVGDFVRLRCNEIIP 186
Query: 211 CDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETI--SGLIKCEKPNR 268
D++LLS+SDP G+ +++T NLDGE+NLK R + V E + + +I+CEKPN
Sbjct: 187 ADILLLSSSDPDGLCHIETANLDGETNLKRRQVVRGFSELVSEFNPLMFTSVIECEKPNN 246
Query: 269 NIYGFHANMEVD-GKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSK 327
++ F + D GK+ L N+LLRGC ++NT +G+ +YAG ETK +LN+SG K
Sbjct: 247 DLTRFRGCIIHDNGKKAGLYKENLLLRGCTIRNTEAVVGIVIYAGHETKALLNNSGPRYK 306
Query: 328 RSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387
RS LE MN +++ L+ + ++ +W++R Y +K + E D
Sbjct: 307 RSQLERQMNCDVLWCVLLLICMSLFSAVGHGLWVQR---------YQEKKSLFDVPESDG 357
Query: 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQ 447
+ ++FL +I+ QV+IPISLY+S+E+V++ Q YF+ QD +YDE + S+ Q
Sbjct: 358 SSLSPVTAAV-YSFLTMIIILQVLIPISLYVSIEIVKVCQVYFINQDIELYDEETDSQLQ 416
Query: 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYS-GGNAR 494
CRALNI EDLGQI+Y+FSDKTGTLTENKM FR ++ GI+YS NA+
Sbjct: 417 CRALNITEDLGQIQYIFSDKTGTLTENKMVFRRCTVSGIEYSHDANAQ 464
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O94296 | YOOC_SCHPO | 3, ., 6, ., 3, ., 1 | 0.3808 | 0.8877 | 0.8362 | yes | no |
| Q8TF62 | AT8B4_HUMAN | 3, ., 6, ., 3, ., 1 | 0.3706 | 0.8936 | 0.8884 | yes | no |
| P98204 | ALA1_ARATH | 3, ., 6, ., 3, ., 1 | 0.7130 | 0.9772 | 1.0 | yes | no |
| Q5BL50 | AT8B1_XENTR | 3, ., 6, ., 3, ., 1 | 0.3557 | 0.8624 | 0.8176 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh4_pg.C_LG_VIII000123 | aminophospholipid ATPase (1228 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1185 | |||
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-131 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-56 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-24 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 9e-24 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 5e-23 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-15 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-15 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 5e-09 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-08 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-08 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 1e-07 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 8e-07 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 2e-06 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-04 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-04 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 0.002 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 0.002 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.003 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 2269 bits (5882), Expect = 0.0
Identities = 971/1186 (81%), Positives = 1059/1186 (89%), Gaps = 9/1186 (0%)
Query: 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGD 60
MD N E P E SSSRRS+SS SR+ +REVT GDLGS+PVR+GSRG D
Sbjct: 1 MDSQNPIEKP-PSHEPILGSSSRRSVSSKDSRS-----VREVTFGDLGSRPVRHGSRGAD 54
Query: 61 SEGLSMSQKEISEEDARFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
SE SMSQKEIS+EDAR VY+NDP KSNE+FEFAGNSIRT KYS+ +F+PRNLFEQFHRV
Sbjct: 55 SEMFSMSQKEISDEDARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRV 114
Query: 121 AYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLAN 180
AYIYFLVIAVLNQLPQLAVFGRG SILPLAFVL VTA+KDAYED+RRHRSDRIENNRLA
Sbjct: 115 AYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAW 174
Query: 181 VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240
VLV++QFQEKKWKDIRVGEIIKI+ N+T+PCDMVLLSTSDPTGVAY+QTINLDGESNLKT
Sbjct: 175 VLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKT 234
Query: 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300
RYAKQETL K+PEKE I+GLIKCEKPNRNIYGF ANMEVDGKRLSLGPSNI+LRGCELKN
Sbjct: 235 RYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKN 294
Query: 301 TSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVW 360
T+WA+GVAVY G+ETK MLN+SGAPSKRS LE MN EII LS FL+ALCT+VS+CAAVW
Sbjct: 295 TAWAIGVAVYCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVW 354
Query: 361 LKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISM 420
L+RH DELD +P+YRRKDFSE G P NY YYGWG EI FTFLMSVIVFQ+MIPISLYISM
Sbjct: 355 LRRHRDELDTIPFYRRKDFSE-GGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISM 413
Query: 421 ELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480
ELVR+GQAYFMI+D MYDEAS+SRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF+C
Sbjct: 414 ELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473
Query: 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540
ASIWG+DYS G + ++ GYSV+VDGK+LRPK+ V VDP LL+LS+SGK+TEE KHV+
Sbjct: 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVH 533
Query: 541 DFFLALAACNTIVPLVV-DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 599
DFFLALAACNTIVP+VV DTSDP VKL+DYQGESPDEQALVYAAAAYGFMLIERTSGHIV
Sbjct: 534 DFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593
Query: 600 IDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNV 659
IDI G+RQ RFNVLGLHEFDSDRKRMSVILG PDKTV +FVKGADTSMFSVI ++LNMNV
Sbjct: 594 IDIHGERQ-RFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNV 652
Query: 660 IRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 719
IR TE+HLH YSSLGLRTLVVGMREL+ SEFEQW SFEAAS AL GRAALLRKVAS+VE
Sbjct: 653 IRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVE 712
Query: 720 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779
NNL ILGAS IEDKLQQGVPEAIESLR AGIKVWVLTGDKQETAISIGYSSKLLT+KMTQ
Sbjct: 713 NNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQ 772
Query: 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILD 839
+IINSNSKESCRKSLEDA+ MSKKL TV G+S N+ SS A +ALIIDGTSLVY+LD
Sbjct: 773 IIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLD 832
Query: 840 SELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 899
SEL+EQLFQLA CSVVLCCRVAPLQKAGIVALVK RTSDMTLAIGDGANDVSMIQMADV
Sbjct: 833 SELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADV 892
Query: 900 GVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 959
GVGISGQEGRQAVM+SDFAMGQFRFLV LLLVHGHWNYQRMGYMILYNFYRNAV V VLF
Sbjct: 893 GVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLF 952
Query: 960 WYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1019
WYVLFT FTLTTAINEWSSVLYSVIYT+LPTIVV ILDKDLSRRTLL+ PQLYGAG RQE
Sbjct: 953 WYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQE 1012
Query: 1020 CYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVI 1079
YN+KLFWLTM DTLWQS V+FF+P AYW STID SSIGDLWTLAVVILVN+HLAMD+I
Sbjct: 1013 AYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDII 1072
Query: 1080 RWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPR 1139
RW WITHA IWGSI+AT ICV++IDA+P+LPGYWA F +AKT FW CL+ I+VAAL+PR
Sbjct: 1073 RWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPR 1132
Query: 1140 FLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1185
F+VK LYQY+ PCDVQIAREAEK G RE E+EMNP+L+PP+R
Sbjct: 1133 FVVKVLYQYFTPCDVQIAREAEKFGTFRESQPVEVEMNPILEPPRR 1178
|
Length = 1178 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 1312 bits (3398), Expect = 0.0
Identities = 505/1085 (46%), Positives = 681/1085 (62%), Gaps = 46/1085 (4%)
Query: 93 FAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFV 152
F N I T KY++LTF+P+NLFEQF R A +YFLV+A+L Q+P L+ RG SI+PLAFV
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 153 LSVTAIKDAYEDYRRHRSDRIENNRLANVLVN-NQFQEKKWKDIRVGEIIKIKTNETIPC 211
L VTAIK+A ED RR R D+ NNRL VL QF E WKD+RVG+I+K+K +E IP
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 212 DMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETL-LKVPEK-ETISGLIKCEKPNRN 269
D++LLS+S+P GV Y++T NLDGE+NLK R A +ET + + + SG I+CE+PN +
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNAS 180
Query: 270 IYGFHANMEVDGKR-LSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKR 328
+Y F NM ++G R L P NILLRGC L+NT W +GV VY G +TK+M N++ APSKR
Sbjct: 181 LYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240
Query: 329 SWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNY 388
S LE +N II L L LC + S+ A +W H +L +Y R D
Sbjct: 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDL----WYIRLD---------V 287
Query: 389 KYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQC 448
F+FL +I+F +IPISLY+S+ELV+ QAYF+ D MY E + +
Sbjct: 288 SERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASV 347
Query: 449 RALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGG---NARSHSEEVGYSVQ 505
R N+NE+LGQ++Y+FSDKTGTLT+N MEF+ SI G+ Y G E +G V+
Sbjct: 348 RTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVE 407
Query: 506 VDGKVLR-PKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNV 564
+ +L K VDP L+ L ++ N K + +FFLALA C+T+VP D D
Sbjct: 408 NENSMLVESKGFTFVDPRLVDLLKT--NKPNAKRINEFFLALALCHTVVPEFND--DGPE 463
Query: 565 KLVDYQGESPDEQALVYAAAAYGFMLIERTSG--HIVIDIQGQRQSRFNVLGLHEFDSDR 622
++ YQ SPDE ALV AA GF+ ERT ++I++ G+ + + +L + EF+SDR
Sbjct: 464 EI-TYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETK-EYEILNVLEFNSDR 521
Query: 623 KRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGM 682
KRMSVI+ PD + L KGADT +F ++ N V T+ HL Y+S GLRTL +
Sbjct: 522 KRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGN-QVNEETKEHLENYASEGLRTLCIAY 580
Query: 683 RELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAI 742
RELS E+E+W + AS AL R L VA S+E +L +LGA+ IEDKLQ+GVPE I
Sbjct: 581 RELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETI 640
Query: 743 ESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSK 802
E LR AGIK+WVLTGDK ETAI+IGYS +LL+ M Q++I S+S ++ R A+
Sbjct: 641 ELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSDSLDATRSVEA---AIKF 697
Query: 803 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA 862
L+ N+ SG +AL+IDG SL Y LD EL+++ QLA C V+CCRV+
Sbjct: 698 GLEGT-SEEFNNLGDSG----NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVS 752
Query: 863 PLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 922
P QKA +V LVK T TLAIGDGANDVSMIQ ADVGVGISG+EG QAVM+SDFA+GQF
Sbjct: 753 PSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQF 812
Query: 923 RFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYS 982
RFL LLLVHG W+Y+R+ MILY FY+N + + FWY + F+ T W VLY+
Sbjct: 813 RFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYN 872
Query: 983 VIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFF 1042
V +T+LP I + + D+D+S L+ PQLY G + + ++TK FW M D ++QS+VIFF
Sbjct: 873 VFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFF 932
Query: 1043 IPFGAYW-------DSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIA 1095
P AY S D SS+G + A+V++VN+ +A+++ RW WI+ IWGSI+
Sbjct: 933 FPMFAYILGDFVSSGSVDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILV 992
Query: 1096 TLICVMIIDAVPSLP-GYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDV 1154
LI V++ ++ P Y A V T FW L++I++ +L+PRF K + + + P D
Sbjct: 993 WLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDY 1052
Query: 1155 QIARE 1159
I +E
Sbjct: 1053 DIVQE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 423 bits (1089), Expect = e-131
Identities = 242/1102 (21%), Positives = 403/1102 (36%), Gaps = 236/1102 (21%)
Query: 65 SMSQKEISEEDARFVYINDPVKSNEKFEF--AGNSIRTGKYSILTFIPRNLFEQFHRVAY 122
+S + F + E + + + + L +
Sbjct: 25 PLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFII 84
Query: 123 IYFLVIAVLNQLPQL-AVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANV 181
+ + + + + IL + + ++ Y + + + ++ A V
Sbjct: 85 LLLVAALLSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKV 144
Query: 182 LVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241
L + +F E ++ G+I+ ++ + +P D+ LL +SD + L GES +
Sbjct: 145 LRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200
Query: 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNT 301
A T P L L N+L G + +
Sbjct: 201 QALPLTKSDAP-------------------------------LGLDRDNMLFSGTTVVSG 229
Query: 302 SWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWL 361
A G+ V G ET+ + P+K+ ++ + ++ KL FL+ L V+ V
Sbjct: 230 R-AKGIVVATGFETEFGKIARLLPTKKE-VKTPLQRKLNKLGKFLLVLALVLGALVFV-- 285
Query: 362 KRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISME 421
+ G +L +FL ++ + +P L +
Sbjct: 286 --------------------------VGLFRGGNGLLESFLTALALAVAAVPEGLPAVVT 319
Query: 422 LVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCA 481
+ A M +D+ + R+LN E LG + + SDKTGTLT+NKM +
Sbjct: 320 IALALGAQRMAKDNAI----------VRSLNAIETLGSVDVICSDKTGTLTQNKMTVKK- 368
Query: 482 SIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYD 541
I+ GG ++D L+ S +
Sbjct: 369 -IY--INGGGK-------------------------DIDDKDLKDSPALLR--------- 391
Query: 542 FFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVID 601
F LA A CN++ P YQ P E ALV A GF L ++
Sbjct: 392 FLLAAALCNSVTPEKNG---------WYQAGDPTEGALVEFAEKLGFSLDLSG-----LE 437
Query: 602 IQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIR 661
++ + FDS+RKRMSVI+ + LFVKGA +
Sbjct: 438 VEYPILAEI------PFDSERKRMSVIVKTDEGKYILFVKGAPEVILE----------RC 481
Query: 662 GTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENN 721
+ L + GLRTL ++EL++ A L RA +V +E++
Sbjct: 482 KSIGELEPLTEEGLRTLEEAVKELASEGLRVL----AVAYKKL-DRAEKDDEVD-EIESD 535
Query: 722 LCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 781
L LG +GIED ++ V EAIE LR AGIKVW++TGD ETAI+I +
Sbjct: 536 LVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAE------ 589
Query: 782 INSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSE 841
A+ AL+IDG L + D E
Sbjct: 590 -----------------------------------------AESALVIDGAELDALSDEE 608
Query: 842 LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 901
L E + + SV RV+P QKA IV ++ ++ + GDG ND ++ ADVG+
Sbjct: 609 LAELVEE----LSV--FARVSPEQKARIVEALQ-KSGHVVAMTGDGVNDAPALKAADVGI 661
Query: 902 GISGQEGRQAVMSSD--FAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 959
+ G EG A + + + L +V G Y + ILY +N V L
Sbjct: 662 AM-GGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLL 720
Query: 960 WYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1019
Y LF F L + + +++ SLP + + + D + +++ P G +
Sbjct: 721 IYSLFNLFFLP--LTPLQLLWINLLTDSLPALALGVEDPE---SDVMKRPP---RGPEEG 772
Query: 1020 CYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDL---------WTLAVVI-L 1069
+N K+FW + S ++F + F Y I + DL +T+ V+I L
Sbjct: 773 LFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQL 832
Query: 1070 VNIHLAMD----VIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLF- 1124
+ + ++ +W +++ +I ++I +P P F+ LF
Sbjct: 833 LLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLP--PLNLKIFQPTPLSLFE 890
Query: 1125 WFCLMIILVAALIPRFLVKFLY 1146
W L+ I VA L+ +V LY
Sbjct: 891 W--LIAIAVALLLLYIVVSELY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 206 bits (525), Expect = 1e-56
Identities = 96/346 (27%), Positives = 137/346 (39%), Gaps = 78/346 (22%)
Query: 145 SILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIK 204
L L FVL V K ED R SDR+ N R A VL N +E KD+ G+++ +K
Sbjct: 3 LFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGW-KEIPAKDLVPGDVVLVK 61
Query: 205 TNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCE 264
+ ET+P D VLLS S ++ NL GESN + A KET SG I +
Sbjct: 62 SGETVPADGVLLSGS-----CFVDESNLTGESNPVLKTA---------LKETQSGTITGD 107
Query: 265 KPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGA 324
Y F + + P+ IL T + V V G ET+ L
Sbjct: 108 LVFAGTYVFGGT-----LIVVVTPTGIL-------TTVGRIAVVVKTGFETRTPL----- 150
Query: 325 PSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGE 384
SKR LE + I L L+AL + + W
Sbjct: 151 QSKRDRLE----NFIFILFLLLLALAVFLYLFIRGWDPNS-------------------- 186
Query: 385 PDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSS 444
I L ++IV +++P +L ++ + + D+ + +
Sbjct: 187 ------------IFKALLRALIVLVIVVPPALPAAVTVAL------AVGDARLAKKG--- 225
Query: 445 RFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSG 490
R LN E+LG++ Y+ SDKTGTLT+NKM + I G
Sbjct: 226 -ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDN 270
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 3e-24
Identities = 54/209 (25%), Positives = 73/209 (34%), Gaps = 56/209 (26%)
Query: 564 VKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRK 623
+Y P E+AL+ +A G + +V F S K
Sbjct: 276 ACDNNYLSGDPMEKALLKSAELVGKADKGN-----------KEYKILDV---FPFSSVLK 321
Query: 624 RMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMR 683
RMSVI+ PD + LFVKGA + E + GLR L +
Sbjct: 322 RMSVIVETPDGSDLLFVKGAPEFILERCNN---------YEEKYLELARQGLRVLAFASK 372
Query: 684 ELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIE 743
EL E++L LG ED L+ E IE
Sbjct: 373 EL---------------------------------EDDLEFLGLITFEDPLRPDAKETIE 399
Query: 744 SLRAAGIKVWVLTGDKQETAISIGYSSKL 772
L+AAGIKV ++TGD TA +I +
Sbjct: 400 ELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 9e-24
Identities = 113/527 (21%), Positives = 194/527 (36%), Gaps = 117/527 (22%)
Query: 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTV 517
G+I DKTGTLTE+ ++ G+ GN
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDL-----RGVQGLSGNQ------------------------ 476
Query: 518 NVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTS-DP-NVKLVDYQGESPD 575
+ + S + ALA C+++ L DP + K+ + G + +
Sbjct: 477 EFLKIVTEDSSLKPS--------ITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLE 528
Query: 576 EQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKT 635
E +A + D Q +++ +F S +RMSVI+ D+
Sbjct: 529 EDD----ESAEP----TSILAVVRTDDPPQE---LSIIRRFQFSSALQRMSVIVSTNDER 577
Query: 636 VT-LFVKGADTSMFSVIAKALNMNVIRGTESH-LHAYSSLGLRTLVVGMRELSASEFEQW 693
FVKGA I + + L +Y+ G R L + +EL
Sbjct: 578 SPDAFVKGAP----ETIQSLCSPETVPSDYQEVLKSYTREGYRVLALAYKELP------- 626
Query: 694 QSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVW 753
+ + + A + L R +VE+NL LG E+ L+ E I+ L+ A I+
Sbjct: 627 KLTLQKAQD-------LSR---DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTV 676
Query: 754 VLTGDKQETAISIGYSSKLLTSKMTQVIIN--SNSKESCRK----SLEDAIAMSKKLKTV 807
++TGD TA+ + ++ T ++ + ++ S +++
Sbjct: 677 MITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIP 736
Query: 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKA 867
+ +S A LA + G + +L + E L +L +V R+AP QK
Sbjct: 737 YPLGQDSVEDLLASRYHLA--MSGKAF-AVLQAHSPELLLRLLSHTTVF--ARMAPDQKE 791
Query: 868 GIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG---------------------- 905
+V L++ + GDGAND ++ ADVG+ +S
Sbjct: 792 TLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAAPFTSKLASISCVPNV 850
Query: 906 -QEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRN 951
+EGR A+++S F M ++ L +L+ Q ILY N
Sbjct: 851 IREGRCALVTS-FQMFKYMALYSLI--------QFYSVSILYLIGSN 888
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 106 bits (265), Expect = 5e-23
Identities = 170/791 (21%), Positives = 274/791 (34%), Gaps = 230/791 (29%)
Query: 143 GVSILPLAF-VLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEII 201
GV+IL V+ VTA+ D ++ + + +R ++ + V+ Q Q+ DI VG+I+
Sbjct: 132 GVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIV 191
Query: 202 KIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLI 261
+ T + +P D V ISGL
Sbjct: 192 SLSTGDVVPADGVF-----------------------------------------ISGL- 209
Query: 262 KCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVM 318
E +I G E D + LL G + S + G + K+M
Sbjct: 210 SLEIDESSITG-----ESDPIKKGPVQDPFLLSGTVVNEGS-GRMLVTAVGVNSFGGKLM 263
Query: 319 LNSSGAPSKRSWLEMHMN--SEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRR 376
+ A + L+ ++ + +I A+ + + Y
Sbjct: 264 MELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLS---------------LRYVF 308
Query: 377 KDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSH 436
+ +G L F+++V + V +P L ++ V + AY M +
Sbjct: 309 RIIRGDGRDTEED----AQTFLDHFIIAVTIVVVAVPEGLPLA---VTIALAYSMKK--- 358
Query: 437 MYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSH 496
M + R L E +G + SDKTGTLT+N M
Sbjct: 359 MMKD----NNLVRHLAACETMGSATAICSDKTGTLTQNVM-------------------- 394
Query: 497 SEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLV 556
SV V + + KHV + + + N+ V
Sbjct: 395 ------SV------------VQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEV 436
Query: 557 VDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLH 616
VD + G S E AL+ F L+ ++ D Q R V+ ++
Sbjct: 437 VDRG----GKRAFIG-SKTECALL------DFGLL------LLRDYQEVRA-EEKVVKIY 478
Query: 617 EFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMN----VIRG-----TESHL 667
F+S+RK MSV++ F KGA + K L+ N I +
Sbjct: 479 PFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCADVI 538
Query: 668 HAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGA 727
+S LRT+ + R+ + EF + L ++G
Sbjct: 539 EPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNKGLTLIGV 576
Query: 728 SGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSK 787
GI+D L+ GV EA++ + AGI V ++TGD +TA +I + +LT
Sbjct: 577 VGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT------------- 623
Query: 788 ESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLF 847
+AM K + SLVY E+D L
Sbjct: 624 -------FGGLAMEGK--------------------------EFRSLVY---EEMDPILP 647
Query: 848 QLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVG--VGISG 905
+L VL R +PL K +V ++K ++ GDG ND +++ADVG +GISG
Sbjct: 648 KL-----RVL-ARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISG 700
Query: 906 QEGRQAVMSSD 916
E A +SD
Sbjct: 701 TE--VAKEASD 709
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 1e-15
Identities = 115/514 (22%), Positives = 177/514 (34%), Gaps = 109/514 (21%)
Query: 449 RALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDG 508
R L E LG + SDKTGTLT N+M + +D S + G + +G
Sbjct: 278 RKLPSVETLGCTTVICSDKTGTLTTNQMS--VCKVVALDPSSSSLNEFCVT-GTTYAPEG 334
Query: 509 KVLRPKLTVN--VDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKL 566
V++ V D L +L+ A CN L + +
Sbjct: 335 GVIKDDGPVAGGQDAGLEELATI----------------AALCND-SSLDFNERKGVYEK 377
Query: 567 VDYQGESPDEQALVYAAAAYGFMLIERTSGHI--VIDIQGQRQSRFNVLGLHEFDSDRKR 624
V GE+ + V S + +F L EF DRK
Sbjct: 378 V---GEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKS 434
Query: 625 MSVILGLPDKTVTLFVKGA------DTSMFSV---IAKALNMNVIRGTESHLHAYSSL-G 674
MSV+ P LFVKGA + A L + S + +
Sbjct: 435 MSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKA 493
Query: 675 LRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKL 734
LR L + +++ E+ S A A+ E++L +G G+ D
Sbjct: 494 LRCLALAFKDIPD-PREEDLLSDPANFEAI--------------ESDLTFIGVVGMLDPP 538
Query: 735 QQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSL 794
+ V +AIE R AGI+V ++TGD +ETA +I ++ I S ++ KS
Sbjct: 539 RPEVADAIEKCRTAGIRVIMITGDNKETAEAI----------CRRIGIFSPDEDVTFKSF 588
Query: 795 EDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCS 854
++ + + S
Sbjct: 589 -----TGREFDEMGPAKQRAACRSA----------------------------------- 608
Query: 855 VVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVM 913
VL RV P K+ +V L++ + ++ GDG ND ++ AD+G+ + SG E A
Sbjct: 609 -VLFSRVEPSHKSELVELLQEQ-GEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAKE 664
Query: 914 SSDFAMGQFRFLVTLLLVH-GHWNYQRMGYMILY 946
+SD + F + V G Y M I Y
Sbjct: 665 ASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRY 698
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 4e-15
Identities = 112/464 (24%), Positives = 166/464 (35%), Gaps = 134/464 (28%)
Query: 449 RALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDG 508
R L E LG + + SDKTGTLT+N M IW D + S V VDG
Sbjct: 313 RKLPSVETLGSVNVICSDKTGTLTKNHMT--VTKIWTSDGLHTMLNAVSLNQFGEVIVDG 370
Query: 509 KVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVD 568
VL TV V L A CN + L+
Sbjct: 371 DVLHGFYTVAVSRILE--------------------AGNLCNNAK-----FRNEADTLLG 405
Query: 569 YQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSV- 627
+P + AL+ +G + R++ V + F S+RK M+V
Sbjct: 406 ----NPTDVALIELLMKFG--------------LDDLRETYIRVAEV-PFSSERKWMAVK 446
Query: 628 ILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSA 687
+ D++ F+KGA + + K + Y +TL L+
Sbjct: 447 CVHRQDRSEMCFMKGA----YEQVLK------------YCTYYQKKDGKTL-----TLTQ 485
Query: 688 SEFEQWQS-SFEAASNAL--FGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIES 744
+ + Q + E AS L A+ K L LG GI D + GV EA+ +
Sbjct: 486 QQRDVIQEEAAEMASAGLRVIAFASGPEK------GQLTFLGLVGINDPPRPGVKEAVTT 539
Query: 745 LRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKL 804
L G+++ ++TGD QETA+SI + M K
Sbjct: 540 LITGGVRIIMITGDSQETAVSIARR----------------------------LGMPSK- 570
Query: 805 KTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL 864
S+ SG + + D+QL Q+ V + R +P
Sbjct: 571 --------TSQSVSGEKLDAMD----------------DQQLSQIVPK--VAVFARASPE 604
Query: 865 QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEG 908
K IV ++ R D+ GDG ND +++AD+GV + GQ G
Sbjct: 605 HKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAM-GQTG 646
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 5e-09
Identities = 66/316 (20%), Positives = 123/316 (38%), Gaps = 90/316 (28%)
Query: 600 IDIQGQRQ--SRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIA----- 652
+D + R SR+ + FD +R+RMSV++ + L KGA + +V +
Sbjct: 429 VDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN 488
Query: 653 ---KALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAA 709
L+ ++R + + GLR + V + L A E + + RA
Sbjct: 489 GEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGD-------------YQRAD 535
Query: 710 LLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 769
E++L + G D ++ A+++L+A+G+ V +LTGD
Sbjct: 536 ---------ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGD----------- 575
Query: 770 SKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALII 829
S+L+ +K+ C ++ L
Sbjct: 576 SELVAAKV------------CH--------------------------------EVGLDA 591
Query: 830 DGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAN 889
+ +++ D++L LA ++ R+ P+ K IV L+K R + +GDG N
Sbjct: 592 GEVLIGSDIETLSDDELANLAERTTLF--ARLTPMHKERIVTLLK-REGHVVGFMGDGIN 648
Query: 890 DVSMIQMADVGVGISG 905
D ++ AD+G+ + G
Sbjct: 649 DAPALRAADIGISVDG 664
|
Length = 902 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 1e-08
Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 65/289 (22%)
Query: 720 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779
+NLC +G + D + VP+A+ R+AGIKV ++TGD TA +I
Sbjct: 555 DNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG-------- 606
Query: 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILD 839
II+ + +++ED ++ +L +P VS + R + A V + G+ L +
Sbjct: 607 -IISEGN-----ETVED---IAARLN-IP-VSQVNPRDAKACV------VHGSDLKDMTS 649
Query: 840 SELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 899
+LDE L + ++ R +P QK IV + R + GDG ND ++ AD+
Sbjct: 650 EQLDEIL----KYHTEIVFARTSPQQKLIIVEGCQ-RQGAIVAVTGDGVNDSPALKKADI 704
Query: 900 GV--GISGQE-GRQA----VMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNA 952
GV GI+G + +QA ++ +FA +VT + G +I N ++
Sbjct: 705 GVAMGIAGSDVSKQAADMILLDDNFAS-----IVTGV---------EEGRLIFDNLKKS- 749
Query: 953 VLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYT-SLPTIVVAILDKDL 1000
A+TLT+ I E + L +I LP + IL DL
Sbjct: 750 ------------IAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDL 786
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 3e-08
Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 149 LAFVLSVTAIKDAYEDYRRHRSD----RIENNRLANVLVNNQFQEKKWKDIRVGEIIKIK 204
+ ++ + A+ +AY++YR ++ ++ A V+ + + +E ++ VG+I+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 205 TNETIPCDMVLLSTSDPTGVAYLQTINLDGES 236
+ +P D ++ G + L GES
Sbjct: 62 PGDRVPADGRIIE-----GSLEVDESALTGES 88
|
Length = 222 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 1e-07
Identities = 68/313 (21%), Positives = 113/313 (36%), Gaps = 90/313 (28%)
Query: 602 IQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAK-------- 653
Q SR+ + FD DR+R+SV++ + L KGA M +V
Sbjct: 398 AARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVV 457
Query: 654 ALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRK 713
L+ + + + G+R + V + L E A F +
Sbjct: 458 TLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGE-------------ADFTKTD---- 500
Query: 714 VASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773
E L I G G D ++ EAI +L GI V VLTGD ++++
Sbjct: 501 -----EEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD-----------NEIV 544
Query: 774 TSKMTQ-VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGT 832
T+++ Q V I++N + G
Sbjct: 545 TARICQEVGIDAND-----------------------------------------FLLGA 563
Query: 833 SLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892
+ + D EL +L + + R+ P+QK+ I+ L+K + +GDG ND
Sbjct: 564 DIEELSDEELARELRKYH------IFARLTPMQKSRIIGLLK-KAGHTVGFLGDGINDAP 616
Query: 893 MIQMADVGVGISG 905
++ ADVG+ +
Sbjct: 617 ALRKADVGISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 8e-07
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 21/99 (21%)
Query: 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQAL-VYAAAAYGFMLIERTSGHIVIDIQGQ 605
A CN + +++ G+ P E AL V+A + R V +I
Sbjct: 1 ALCNDAK-FGENEEKNGGEII---GD-PTESALLVFAEKLGIDVEELRARYPRVAEI--- 52
Query: 606 RQSRFNVLGLHEFDSDRKRMSVILGLPDKT-VTLFVKGA 643
F+S+RKRMS + L D LFVKGA
Sbjct: 53 -----------PFNSERKRMSTVHKLEDDDGYRLFVKGA 80
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 2e-06
Identities = 70/316 (22%), Positives = 124/316 (39%), Gaps = 76/316 (24%)
Query: 618 FDSDRKRMSVIL-GLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTE----------SH 666
FDS+ KRM+ I +T ++ KGA + + + + ++ + ++
Sbjct: 533 FDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIAN 592
Query: 667 LHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILG 726
+ + ++ GLR L ++ F++ ++ + N RA + E++L LG
Sbjct: 593 MESLAAEGLRVLA-----FASKSFDKADNNDDQLKNETLNRA--------TAESDLEFLG 639
Query: 727 ASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNS 786
GI D + A+E AGI V +LTGD ETA +I ++
Sbjct: 640 LIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI-------- 691
Query: 787 KESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQL 846
R + D++ M+ D S DE++
Sbjct: 692 --HDRDEIMDSMVMTGSQ------------------------FDALS---------DEEV 716
Query: 847 FQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GIS 904
L C V+ R AP K ++ + R + + GDG ND ++MA+VG+ GI+
Sbjct: 717 DDLKALCLVI--ARCAPQTKVKMIEALHRRKAFCAMT-GDGVNDSPSLKMANVGIAMGIN 773
Query: 905 G----QEGRQAVMSSD 916
G ++ V+S D
Sbjct: 774 GSDVAKDASDIVLSDD 789
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 49.6 bits (119), Expect = 8e-06
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 850 AGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGR 909
A + + RV+P QK IV ++ + + GDG ND ++ ADVG+ + +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMGAKA-- 479
Query: 910 QAVMSSDFAMGQFRF-LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFT 968
++D + + + G + + I + N +L+ + ++
Sbjct: 480 ----AADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLL 535
Query: 969 LTTA 972
A
Sbjct: 536 PMLA 539
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-04
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
++G + D+L+ EAI +L+A GIKV +LTGD + TA +I
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-04
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 28/149 (18%)
Query: 618 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLH--------A 669
FD R+R+SV++ L KGA M +V + + +R + A
Sbjct: 447 FDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEA 506
Query: 670 YSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 729
Y++ G R L+V RE+ E S A + A E +L I G
Sbjct: 507 YNADGFRVLLVATREIPGGE-----------SRAQYSTAD---------ERDLVIRGFLT 546
Query: 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGD 758
D ++ AI +LR G+ V VLTGD
Sbjct: 547 FLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.002
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 718 VENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISI 766
V N + G + D+L+ E I++L+ GI+ +LTGD ++TA ++
Sbjct: 399 VAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAV 447
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 877 TSDMTLAIGDGANDVSMIQMADVGV 901
+ +A GDG ND+ M+++A +GV
Sbjct: 201 DLEEVIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 881 TLAIGDGANDVSMIQMADVGVGISGQEGRQAV 912
T+A+GDGAND+SMI+ A +G+ + + Q
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQQK 202
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1185 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.87 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.5 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.42 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 98.79 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.65 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.61 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.52 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.42 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.42 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.37 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.27 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.26 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.19 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.15 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.14 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.14 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.13 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.12 | |
| PLN02887 | 580 | hydrolase family protein | 98.1 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.09 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.06 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.05 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.99 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 97.99 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 97.97 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 97.96 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 97.95 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.93 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.77 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.69 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.68 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 97.67 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.66 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.65 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.62 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.58 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.57 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.56 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.54 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.48 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.44 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 97.43 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.42 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.4 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.3 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.3 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.24 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.1 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.08 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.06 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.05 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.02 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 96.94 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.76 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.62 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 96.57 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 96.46 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.45 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 96.43 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.4 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 96.37 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.34 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.25 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 95.96 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 95.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 95.94 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 95.93 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.9 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.83 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 95.78 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.71 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.67 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 95.67 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 95.56 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 95.49 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.31 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.19 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.03 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 94.99 | |
| PLN02940 | 382 | riboflavin kinase | 94.98 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 94.95 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.91 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 94.75 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 94.7 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 94.69 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 94.66 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.65 | |
| PLN02811 | 220 | hydrolase | 94.58 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 94.49 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 94.17 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.14 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.07 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 93.83 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.41 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 93.28 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.18 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 92.96 | |
| PLN02423 | 245 | phosphomannomutase | 92.62 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 92.56 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 92.36 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 91.79 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 91.72 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 90.99 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 90.61 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 90.53 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 90.52 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 90.46 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 90.21 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 90.18 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 89.62 | |
| PLN02151 | 354 | trehalose-phosphatase | 89.46 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 88.85 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 88.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 87.63 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 87.62 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 86.89 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 86.61 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 86.34 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 86.16 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 84.97 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 83.25 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 83.2 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 82.56 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 81.13 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 80.02 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-217 Score=1988.99 Aligned_cols=1069 Identities=44% Similarity=0.740 Sum_probs=973.5
Q ss_pred CCCCceEEEeCCCcCcc-cccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHH
Q 001023 72 SEEDARFVYINDPVKSN-EKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLA 150 (1185)
Q Consensus 72 ~~~~~r~v~~n~~~~~~-~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~ 150 (1185)
.++.+|+|++|+|.... +..+|+.|+|+|+||+++|||||+|||||+|++|+|||++++|+++| ++|++++++++||+
T Consensus 10 ~~~~~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~ 88 (1151)
T KOG0206|consen 10 RPGFSRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLL 88 (1151)
T ss_pred cCCCceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeecee
Confidence 56778999999995432 45689999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHhhcceEEEEeCCe-EEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEe
Q 001023 151 FVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQ-FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQT 229 (1185)
Q Consensus 151 ~vi~~s~i~~~~ed~~r~k~d~~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdt 229 (1185)
+|+.++++||++|||||+++|+++|+++++|++++. +++..|++|+|||+|++.++|.+|||++||+||+++|.|||||
T Consensus 89 ~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT 168 (1151)
T KOG0206|consen 89 FVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVET 168 (1151)
T ss_pred eeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEE
Confidence 999999999999999999999999999999999533 9999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCceeeccccccc-ccCccc-ccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEE
Q 001023 230 INLDGESNLKTRYAKQETL-LKVPEK-ETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGV 307 (1185)
Q Consensus 230 s~LtGEs~~~~K~~~~~~~-~~~~~~-~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gv 307 (1185)
+|||||||+|.|++.+.+. ....+. ..+++.|+||+||+++|.|.|++..+++..|++++|+++|||+||||+|++|+
T Consensus 169 ~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~ 248 (1151)
T KOG0206|consen 169 ANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGV 248 (1151)
T ss_pred eecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEE
Confidence 9999999999999988886 433333 88999999999999999999999988877799999999999999999999999
Q ss_pred EEEecccchhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCC
Q 001023 308 AVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387 (1185)
Q Consensus 308 Vv~tG~~Tki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~ 387 (1185)
|++||+|||+|+|+.++++|+|++++.+|+.++.++++++++|+++++..++|...+..... ..||+.+..
T Consensus 249 vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~-------- 319 (1151)
T KOG0206|consen 249 VVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNG-EWWYLSPSE-------- 319 (1151)
T ss_pred EEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccC-chhhhcCch--------
Confidence 99999999999999999999999999999999999999999999999999999875433211 478876542
Q ss_pred cccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcC
Q 001023 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDK 467 (1185)
Q Consensus 388 ~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDK 467 (1185)
++...+.+|+++++++.+++|+|||+++|+++++|+++|++|.+||+++++.++.+|++|++|+||||+||++||
T Consensus 320 -----~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDK 394 (1151)
T KOG0206|consen 320 -----AAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDK 394 (1151)
T ss_pred -----HHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcC
Confidence 345678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccceeEEEEEEEeceecCCCCCCCcccc-cccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHH
Q 001023 468 TGTLTENKMEFRCASIWGIDYSGGNARSHSEE-VGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLAL 546 (1185)
Q Consensus 468 TGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~l 546 (1185)
|||||+|.|+|++|+|+|..|+...++.+... ++.+..... +..+++.|. |+.+++ +.+.+.+++..+++|++++
T Consensus 395 TGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~-~~~~~~--~~~~~~~~~~~~~~f~~~l 470 (1151)
T KOG0206|consen 395 TGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNE-HKIKGFTFE-DSRLVD--GLWSSEPQAEDILEFFRAL 470 (1151)
T ss_pred cCccccceeeeecccccCcccccCCChhhcccCccccccccc-cccccceec-cchhhc--cccccccCcchHHHHhhHH
Confidence 99999999999999999999999887754443 222111111 334566777 788887 6777778999999999999
Q ss_pred HhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEE
Q 001023 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMS 626 (1185)
Q Consensus 547 a~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrms 626 (1185)
|+|||++| +.+++.+.+.|+++||||.||+++|+++|+.+..|+++.++++..|..+ +|++|+++||+|+|||||
T Consensus 471 a~chtv~~----e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~-~y~lL~iLeF~S~RKRMS 545 (1151)
T KOG0206|consen 471 ALCHTVIP----EKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEE-TYELLNVLEFNSTRKRMS 545 (1151)
T ss_pred hccceeee----ccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccce-eEEEEEEeccccccceeE
Confidence 99999999 7766666899999999999999999999999999999999999888677 999999999999999999
Q ss_pred EEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhh
Q 001023 627 VILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFG 706 (1185)
Q Consensus 627 viv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~ 706 (1185)
||||+|+|++.|||||||++|++|+..+ ++...+.+.+|+++||.+||||||+|||+++++||++|+++|.+|++++.|
T Consensus 546 VIVR~p~g~i~LycKGADsvI~erL~~~-~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~ 624 (1151)
T KOG0206|consen 546 VIVRDPDGRILLYCKGADSVIFERLSKN-GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTD 624 (1151)
T ss_pred EEEEcCCCcEEEEEcCcchhhHhhhhhc-chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999987 788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCC
Q 001023 707 RAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNS 786 (1185)
Q Consensus 707 r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~ 786 (1185)
|+++++++++.+|+||+|+|+|||||+||+||||||++|++||||+|||||||+|||+|||++|++++++|+++.++..+
T Consensus 625 Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~ 704 (1151)
T KOG0206|consen 625 REELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTET 704 (1151)
T ss_pred HHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHHHH-HHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCccc
Q 001023 787 KESCRKSLE-DAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQ 865 (1185)
Q Consensus 787 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~q 865 (1185)
.++...... ..+.+...............+. ...+++|||||++|.++++++.+..|++++..|++|+|||+||.|
T Consensus 705 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQ 781 (1151)
T KOG0206|consen 705 SEELSSLDATAALKETLLRKFTEELEEAKLEH---SEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQ 781 (1151)
T ss_pred hhhhcchhhHHHHHHHHHHhhhHHHHHHhhcc---CcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHH
Confidence 432111110 0111111111111010000110 123689999999999999998899999999999999999999999
Q ss_pred HHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhhHHHHHHHHhhHHHHHhhhhhh
Q 001023 866 KAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMIL 945 (1185)
Q Consensus 866 Ka~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~ 945 (1185)
||++|+++|+..+.+||||||||||++|||+|||||||+|.||+||+++|||+|+||+||.+||||||||+|.|++++++
T Consensus 782 KA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~il 861 (1151)
T KOG0206|consen 782 KALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMIL 861 (1151)
T ss_pred HHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHH
Confidence 99999999987999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhH
Q 001023 946 YNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKL 1025 (1185)
Q Consensus 946 ~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~ 1025 (1185)
|+||||++|++++|||.+|+|||||++|++|++.+||++||++|++++|+||||++++.++++|+||+.|+++..|+|+.
T Consensus 862 yfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~ 941 (1151)
T KOG0206|consen 862 YFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKR 941 (1151)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHhhheeeccc-------cccCCcccchhhhHHHHHHHHHHHHHHHHHhhccchhHhHHHHHHHHHHHHH
Q 001023 1026 FWLTMADTLWQSVVIFFIPFG-------AYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLI 1098 (1185)
Q Consensus 1026 ~~~~~~~~~~~~~vif~~~~~-------~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i 1098 (1185)
|+.|+++|+++++++||+.+. ..+|++.|.+.+|+++||++|+++|+++++.+++|||++|+++|||+++||+
T Consensus 942 f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~ 1021 (1151)
T KOG0206|consen 942 FWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFV 1021 (1151)
T ss_pred HHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHH
Confidence 999999999999999998433 3489999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccC----C-CchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHhCCccc
Q 001023 1099 CVMIIDAVP----S-LPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRE 1168 (1185)
Q Consensus 1099 ~~~i~~~i~----~-~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f~p~~~~~~~e~~~~~~~~~ 1168 (1185)
++++|+..+ . .+.++.+...+++|.||++++++++++++|+++++++++.++|++++++||+++.++..+
T Consensus 1022 f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~~~~~~ 1096 (1151)
T KOG0206|consen 1022 FLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKYRRRAS 1096 (1151)
T ss_pred HHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhcccccc
Confidence 999998633 2 233558889999999999999999999999999999999999999999999997554433
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-202 Score=1926.68 Aligned_cols=1176 Identities=82% Similarity=1.282 Sum_probs=1011.3
Q ss_pred CCCCCCcCCCCCceeeecCCCcccccccchhhcccCCCCccccccccccCcccCCCCCCCCCCCcccccccCCCCceEEE
Q 001023 1 MDLNNSTESTVPHFEINTSSSSRRSISSSQSRASRGNSIREVTLGDLGSKPVRYGSRGGDSEGLSMSQKEISEEDARFVY 80 (1185)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~v~ 80 (1185)
||.+++.++. |+.++.++++|++|.++.+.+.. +++.|+.+.+...|.++++.+.+....+++.+.....|.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~i~ 74 (1178)
T PLN03190 1 MDSQNPIEKP-PSHEPILGSSSRRSVSSKDSRSV-----REVTFGDLGSRPVRHGSRGADSEMFSMSQKEISDEDARLVY 74 (1178)
T ss_pred CCCCCCCCCC-CCcCccccccccccccccccccc-----ccccccccCcceeecccCCCCCCcccccCCccccCCceEEE
Confidence 8999999988 99999999999877664443321 46677777777766665455554445555666667789999
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHH
Q 001023 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKD 160 (1185)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~ 160 (1185)
+|++...+...+|++|.|+|+||++|+|||++||+||+|++|+|||++++++++|++++.+++++++||+++++++++++
T Consensus 75 ~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v~~ike 154 (1178)
T PLN03190 75 LNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLVTAVKD 154 (1178)
T ss_pred cCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHHHHHHH
Confidence 99986544566899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCcee
Q 001023 161 AYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKT 240 (1185)
Q Consensus 161 ~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~ 240 (1185)
++||++|+++|+++|+++++|+++|++++++|++|+|||||+|++||.+|||++||+||+++|.|+|||++|||||+||.
T Consensus 155 ~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~ 234 (1178)
T PLN03190 155 AYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKT 234 (1178)
T ss_pred HHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhhhc
Q 001023 241 RYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLN 320 (1185)
Q Consensus 241 K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~~n 320 (1185)
|.+++.+.....+...++|.|+||.||+++|.|.|++.++|+..+++.+|+++|||.|+||+|++|+|+|||+|||+|+|
T Consensus 235 k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~~N 314 (1178)
T PLN03190 235 RYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAMLN 314 (1178)
T ss_pred ecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHhhc
Confidence 99987664111222567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHH
Q 001023 321 SSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFT 400 (1185)
Q Consensus 321 ~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (1185)
+.+++.|+|++|+.+|+++.+++++++++|++++++..+|.....++..+.+||+..+...... ..++.+.+....++.
T Consensus 315 ~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 393 (1178)
T PLN03190 315 NSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGP-KNYNYYGWGWEIFFT 393 (1178)
T ss_pred CCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-cccccchhhHHHHHH
Confidence 9999999999999999999999999999999999988777643333223344555432111000 011112222345678
Q ss_pred HHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEE
Q 001023 401 FLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRC 480 (1185)
Q Consensus 401 ~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~ 480 (1185)
|+++++++..+||+||++++|+++++|+++|.+|.+||+++.+.++.||+++++|+||||+|||+|||||||+|+|+|++
T Consensus 394 f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~ 473 (1178)
T PLN03190 394 FLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQC 473 (1178)
T ss_pred HHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCC
Q 001023 481 ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTS 560 (1185)
Q Consensus 481 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~ 560 (1185)
|+++|..|+.+....+..........++....+...+..|+.+.+........+..+.+.+|+++||+||++.|...++.
T Consensus 474 ~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~ 553 (1178)
T PLN03190 474 ASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDT 553 (1178)
T ss_pred EEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCC
Confidence 99999999854322111111110011111111111121144444422212222334567899999999999998321111
Q ss_pred -CCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEE
Q 001023 561 -DPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 639 (1185)
Q Consensus 561 -~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 639 (1185)
+...+.++|+|+||||.||+++|+++|+.+.+|+++.+.++..|... +|++++++||+|+|||||||++++++++++|
T Consensus 554 ~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~-~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~ 632 (1178)
T PLN03190 554 SDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQ-RFNVLGLHEFDSDRKRMSVILGCPDKTVKVF 632 (1178)
T ss_pred CCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecccee-cceeEEEecccccccEEEEEEEcCCCcEEEE
Confidence 11113578999999999999999999999999999999999999998 9999999999999999999999999999999
Q ss_pred EcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhc
Q 001023 640 VKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVE 719 (1185)
Q Consensus 640 ~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE 719 (1185)
|||||++|+++|....+++.++++.+++++|+++|+|||++|||+++++|+++|..+|.+|+.++.+|+++++++.+.+|
T Consensus 633 ~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE 712 (1178)
T PLN03190 633 VKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVE 712 (1178)
T ss_pred EecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhh
Confidence 99999999999976434457788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHH
Q 001023 720 NNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIA 799 (1185)
Q Consensus 720 ~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~ 799 (1185)
+||+++|+++++|+||+||+++|+.|++|||+|||||||+.+||++||++|||++++++.+.++..+.+.+...+++...
T Consensus 713 ~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~ 792 (1178)
T PLN03190 713 NNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALV 792 (1178)
T ss_pred cCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999988877666666555433
Q ss_pred hhcccccCCC-CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC
Q 001023 800 MSKKLKTVPG-VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS 878 (1185)
Q Consensus 800 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g 878 (1185)
.........+ .+... ........+.+++|||.+|..+++++++++|.+++..|++|||||+||+||+++|+++|+..+
T Consensus 793 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~ 871 (1178)
T PLN03190 793 MSKKLTTVSGISQNTG-GSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTS 871 (1178)
T ss_pred hhhhcccccccccccc-ccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCC
Confidence 2211100000 00000 000112456789999999999998888999999999999999999999999999999998556
Q ss_pred CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhhHHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHH
Q 001023 879 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVL 958 (1185)
Q Consensus 879 ~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~ 958 (1185)
++|||||||+|||+|||+|||||||+|+||+||++||||+|.+|++|.+||++||||+|+|++++++|+||||+++++++
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~q 951 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVL 951 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHHHHh
Q 001023 959 FWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSV 1038 (1185)
Q Consensus 959 ~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~ 1038 (1185)
|||.++++|||+++|++|.+++||++||++|++++|+||+|++++.++++|+||+.++++..|+.+.|+.|++.|+|||+
T Consensus 952 f~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~ 1031 (1178)
T PLN03190 952 FWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSA 1031 (1178)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeccccccCCcccchhhhHHHHHHHHHHHHHHHHHhhccchhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH
Q 001023 1039 VIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEV 1118 (1185)
Q Consensus 1039 vif~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~ 1118 (1185)
++||+.++...+...+.+..|.++++++++++|+++++.+++|+|++++++|+|+++|+++.++++.++.+..++.+..+
T Consensus 1032 iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~ 1111 (1178)
T PLN03190 1032 VVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHI 1111 (1178)
T ss_pred HHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHH
Confidence 99988555445555566677899999999999999999999999999999999999999999999988765667777778
Q ss_pred hhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHhCCcccccCccccCCCCCCCCCC
Q 001023 1119 AKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAREAEKVGNLRERGAGEIEMNPVLDPPQR 1185 (1185)
Q Consensus 1119 ~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f~p~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1185 (1185)
+.+|.||+.++++++++++|++++++++|.|+|.+++++||.++.+..++..+...++.....+|+|
T Consensus 1112 ~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1178 (1178)
T PLN03190 1112 AKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGTFRESQPVEVEMNPILEPPRR 1178 (1178)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcccccchhhhccccccccCCCC
Confidence 8899999999999999999999999999999999999999988888877776666777888888876
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-175 Score=1701.70 Aligned_cols=1034 Identities=48% Similarity=0.794 Sum_probs=915.9
Q ss_pred CCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHHHHhhhhH
Q 001023 93 FAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDR 172 (1185)
Q Consensus 93 ~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed~~r~k~d~ 172 (1185)
|++|.|+|+||++|+|+|++||+||+|++|+|||++++++++|++++.+++++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceEEEEeC-CeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeeccccccc-cc
Q 001023 173 IENNRLANVLVN-NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETL-LK 250 (1185)
Q Consensus 173 ~~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~-~~ 250 (1185)
++|+++++|+|+ |++++++|++|+|||||+|++||.+|||++||+|++++|.|+||||+|||||+||.|++...+. ..
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999996 8999999999999999999999999999999999999999999999999999999999876664 33
Q ss_pred Cccc-ccceeEEEecCCCCCceeeEEEEEEcC-eeeecCCCceEeecceeecCCeEEEEEEEecccchhhhccCCCCCCc
Q 001023 251 VPEK-ETISGLIKCEKPNRNIYGFHANMEVDG-KRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKR 328 (1185)
Q Consensus 251 ~~~~-~~~~~~i~~e~pn~~~~~f~Gt~~~~g-~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~~n~~~~~~k~ 328 (1185)
.... ..++|.|+||.||+++|.|.|++.+++ ...|++.+|+++|||.|+||||++|+|+|||+|||+++|+..++.|+
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~k~ 240 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPSKR 240 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcccc
Confidence 3333 678899999999999999999999988 77899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHh
Q 001023 329 SWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVF 408 (1185)
Q Consensus 329 s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~ 408 (1185)
|++|+++|+++.+++.+++++|++++++..+|...... ..||+..+.. ...+....+..|+++++++
T Consensus 241 s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~----~~~yl~~~~~---------~~~~~~~~~~~~~~~~~L~ 307 (1057)
T TIGR01652 241 SRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGK----DLWYIRLDVS---------ERNAAANGFFSFLTFLILF 307 (1057)
T ss_pred cHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCC----CccceecCcc---------cccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999887777543221 3688854321 1223345667899999999
Q ss_pred hccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEeceec
Q 001023 409 QVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDY 488 (1185)
Q Consensus 409 ~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y 488 (1185)
+.+||++|++++++++.+|+++|++|.+|++++.++++.+|+++++|+||+|++||+|||||||+|+|+|++|+++|..|
T Consensus 308 ~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y 387 (1057)
T TIGR01652 308 SSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSY 387 (1057)
T ss_pred hhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEe
Confidence 99999999999999999999999999999988788899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcccc-cccccccC----CcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCC-CC
Q 001023 489 SGGNARSHSEE-VGYSVQVD----GKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTS-DP 562 (1185)
Q Consensus 489 ~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~-~~ 562 (1185)
+.+.++..... ...+...+ .....+..++. ++++.+... .+.+..+.+.+|++++++||++.+ +. ++
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~~l~lC~~v~~----~~~~~ 460 (1057)
T TIGR01652 388 GDGFTEIKDAIRERLGSYVENENSMLVESKGFTFV-DPRLVDLLK--TNKPNAKRINEFFLALALCHTVVP----EFNDD 460 (1057)
T ss_pred cCCcchHHHHhhhcccccccccccccccccccccC-cHHHHHhhh--cCCchhHHHHHHHHHHHhcCcccc----cccCC
Confidence 85443221111 11110000 00011123344 566655221 133445678899999999999998 43 22
Q ss_pred CCcceeeecCChhHHHHHHHHHHcCCEEEEecCC--eEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEE
Q 001023 563 NVKLVDYQGESPDEQALVYAAAAYGFMLIERTSG--HIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFV 640 (1185)
Q Consensus 563 ~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~--~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~ 640 (1185)
+.+.+.|+++||+|.||+++|+.+|+.+.+|+++ .+.++..|... .|++++++||+|+||||||+++++++++++||
T Consensus 461 ~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~ 539 (1057)
T TIGR01652 461 GPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETK-EYEILNVLEFNSDRKRMSVIVRNPDGRIKLLC 539 (1057)
T ss_pred CCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEE-EEEEEEecccCCCCCeEEEEEEeCCCeEEEEE
Confidence 3345889999999999999999999999999988 55667778878 99999999999999999999999999999999
Q ss_pred cCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhcc
Q 001023 641 KGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVEN 720 (1185)
Q Consensus 641 KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~ 720 (1185)
||||++|+++|... +++..+.+.+++++|+.+|+|||++|+|+++++|+++|.++|++|+.++.+|++.+++..+.+|+
T Consensus 540 KGA~e~il~~~~~~-~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~ 618 (1057)
T TIGR01652 540 KGADTVIFKRLSSG-GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEK 618 (1057)
T ss_pred eCcHHHHHHHhhcc-chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Confidence 99999999999864 45677889999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHH---HHHHHH
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCR---KSLEDA 797 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~---~~~~~~ 797 (1185)
||+|+|++|+|||||+||+++|+.|++|||||||+|||+.+||++||++|||++++.+.+.++..+.+++. ..+.+.
T Consensus 619 ~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~ 698 (1057)
T TIGR01652 619 DLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFG 698 (1057)
T ss_pred cCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888888887654432 222222
Q ss_pred HHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhC
Q 001023 798 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT 877 (1185)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~ 877 (1185)
....... . .. .....+++++|+|++|+.+++++++++|.+++..|++|||||++|+||+++|+++|+..
T Consensus 699 ~~~~~~~-~-------~~---~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~ 767 (1057)
T TIGR01652 699 LEGTSEE-F-------NN---LGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKST 767 (1057)
T ss_pred HHHHHHh-h-------hh---hccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcC
Confidence 2111100 0 00 00145678999999999999988888999999999999999999999999999999944
Q ss_pred CCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhhHHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHH
Q 001023 878 SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFV 957 (1185)
Q Consensus 878 g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~ 957 (1185)
|++|+|||||+||++|||+||||||++|+||.||++||||++.+|++|.++|++|||++|+|+++++.|.||||++++++
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~ 847 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAII 847 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHHHH
Q 001023 958 LFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQS 1037 (1185)
Q Consensus 958 ~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1185)
+|||.++++|+|+++|++|++++||+++|++|++++|++|+|++++.++++|++|+.++++..|+++.|+.|++.|+||+
T Consensus 848 ~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~ 927 (1057)
T TIGR01652 848 QFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQS 927 (1057)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhheeeccc-------cccCCcccchhhhHHHHHHHHHHHHHHHHHhhccchhHhHHHHHHHHHHHHHHHHHHhccC-CC
Q 001023 1038 VVIFFIPFG-------AYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVP-SL 1109 (1185)
Q Consensus 1038 ~vif~~~~~-------~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~-~~ 1109 (1185)
+++|++..+ ..+|.+.+.+.+|+++|+++++++|+++++.+++|+|++++++|+|+++|+++.++|..++ ..
T Consensus 928 ~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~ 1007 (1057)
T TIGR01652 928 LVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSP 1007 (1057)
T ss_pred HHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 999876221 2357888999999999999999999999999999999999999999999999999988655 33
Q ss_pred chHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHH
Q 001023 1110 PGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIARE 1159 (1185)
Q Consensus 1110 ~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f~p~~~~~~~e 1159 (1185)
+.++.+..++.+|.||+.++++++++++|+++++++++.|+|+.++++||
T Consensus 1008 ~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1008 AFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred cHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 33556778889999999999999999999999999999999999999874
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-156 Score=1311.66 Aligned_cols=978 Identities=31% Similarity=0.484 Sum_probs=853.6
Q ss_pred eEEEeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHH
Q 001023 77 RFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVT 156 (1185)
Q Consensus 77 r~v~~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s 156 (1185)
|++....... .++.+|.+|.++..||++++|+|..||+||+-+.|+|||+.++.+++|.+..-...+++.|+.++++++
T Consensus 64 rt~~~~~~~~-~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~it 142 (1051)
T KOG0210|consen 64 RTVNISFGPH-YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTIT 142 (1051)
T ss_pred ceeecccCCC-cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHH
Confidence 5554433222 256789999999999999999999999999999999999999999999877667888999999999999
Q ss_pred HHHHHHHHHHHhhhhHHhhcceEEEE-eCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCC
Q 001023 157 AIKDAYEDYRRHRSDRIENNRLANVL-VNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGE 235 (1185)
Q Consensus 157 ~i~~~~ed~~r~k~d~~~n~~~~~V~-r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGE 235 (1185)
++||+++|.+|++.|++.|+.+++++ |+|. ...++++|+|||+|++++||+||||++||.+|++.|.|+|-|..||||
T Consensus 143 l~keavdd~~r~~rd~~~Nse~y~~ltr~~~-~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGE 221 (1051)
T KOG0210|consen 143 LIKEAVDDLKRRRRDRELNSEKYTKLTRDGT-RREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGE 221 (1051)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhheeeccCCc-ccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCc
Confidence 99999999999999999999999999 4554 444999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccccc-ccCccc-ccceeEEEecCCCCCceeeEEEEEEc--CeeeecCCCceEeecceeecCCeEEEEEEEe
Q 001023 236 SNLKTRYAKQETL-LKVPEK-ETISGLIKCEKPNRNIYGFHANMEVD--GKRLSLGPSNILLRGCELKNTSWALGVAVYA 311 (1185)
Q Consensus 236 s~~~~K~~~~~~~-~~~~~~-~~~~~~i~~e~pn~~~~~f~Gt~~~~--g~~~~l~~~nil~rgs~l~nt~~i~gvVv~t 311 (1185)
|+.|.|-|.+.++ +.++.+ ..++ +..|.|+.++|.|.|++.+. .+..+|+.+|.++.++.+.. +.++|+|+||
T Consensus 222 TDWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs-~t~~gvVvYT 298 (1051)
T KOG0210|consen 222 TDWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVAS-GTAIGVVVYT 298 (1051)
T ss_pred ccceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEec-CcEEEEEEEe
Confidence 9999999999998 666544 5555 99999999999999999994 34579999999999999886 5599999999
Q ss_pred cccchhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccc
Q 001023 312 GQETKVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYY 391 (1185)
Q Consensus 312 G~~Tki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~ 391 (1185)
|.||+-++|.+.+++|-..++..+|.+..+++.++++++++....-++- ..||+
T Consensus 299 G~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~~----------~~wyi---------------- 352 (1051)
T KOG0210|consen 299 GRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGFG----------SDWYI---------------- 352 (1051)
T ss_pred cccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcCC----------CchHH----------------
Confidence 9999999999999999999999999999999999988887765544331 36876
Q ss_pred cchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCcc
Q 001023 392 GWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTL 471 (1185)
Q Consensus 392 ~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTL 471 (1185)
.+++++.+++++||++|-+.++++|...+..|.+|.+. .+..+|++++-|+||+|+|+++||||||
T Consensus 353 --------~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~I------pgtvvRSstIPEeLGRIsylLtDKTGTL 418 (1051)
T KOG0210|consen 353 --------YIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNI------PGTVVRSSTIPEELGRISYLLTDKTGTL 418 (1051)
T ss_pred --------HHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCC------CceeeecCCChHHhcceEEEEecCcCcc
Confidence 78999999999999999999999999999999988876 5789999999999999999999999999
Q ss_pred ccceeEEEEEEEeceecCCCCC-CCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhc
Q 001023 472 TENKMEFRCASIWGIDYSGGNA-RSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACN 550 (1185)
Q Consensus 472 T~n~m~~~~~~i~g~~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Ch 550 (1185)
|+|+|+|++++.+-..|+.+.. +++.-.+....+ +....+.. ......+.+..+++..+++|+||
T Consensus 419 TqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~--~~~~~~~~------------~~~~k~~~s~rv~~~V~alalCH 484 (1051)
T KOG0210|consen 419 TQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTP--GRNKGKGA------------LSRVKKDMSARVRNAVLALALCH 484 (1051)
T ss_pred ccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCC--Cccccccc------------chhhcCcccHHHHHHHHHHHHhc
Confidence 9999999999999988874321 111111100000 00000000 11122455667889999999999
Q ss_pred ccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEe
Q 001023 551 TIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILG 630 (1185)
Q Consensus 551 t~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~ 630 (1185)
++.| . -+++|...|++.||||.|+|++....|..+..|+...+.++.++....+|+||+++||+|+.|||++|||
T Consensus 485 NVTP----v-~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr 559 (1051)
T KOG0210|consen 485 NVTP----V-FEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVR 559 (1051)
T ss_pred cCCc----c-cCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEe
Confidence 9999 3 2345689999999999999999999999999999999999887655449999999999999999999999
Q ss_pred cC-CCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHH
Q 001023 631 LP-DKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAA 709 (1185)
Q Consensus 631 ~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~ 709 (1185)
++ .+++..|.||||.+|....+.+ ++.++...++|.+|+|||++|+|.|+++||+.|...|+.|+.++.||++
T Consensus 560 ~e~~~evtfylKGAD~VMs~iVq~N------dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~ 633 (1051)
T KOG0210|consen 560 DETTEEVTFYLKGADVVMSGIVQYN------DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQ 633 (1051)
T ss_pred cCCCceEEEEEecchHHHhcccccc------hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHH
Confidence 97 7999999999999998876544 5677888999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-hhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHH
Q 001023 710 LLRKVAS-SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKE 788 (1185)
Q Consensus 710 ~~~~~~~-~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~ 788 (1185)
++.++.+ .+|+||++||++|+||+||++|+.+++.||+||||||||||||.|||+.||++.+|+..++.+..+......
T Consensus 634 ~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr 713 (1051)
T KOG0210|consen 634 KMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSR 713 (1051)
T ss_pred HHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCc
Confidence 9999988 999999999999999999999999999999999999999999999999999999999999988888766433
Q ss_pred -HHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHH
Q 001023 789 -SCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKA 867 (1185)
Q Consensus 789 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa 867 (1185)
+...+++..- .....+|+|||++|...++ +.+++|.++++.|.+||||||+|.|||
T Consensus 714 ~dah~eL~~lR----------------------~k~~~aLvi~G~Sl~~cl~-yye~Ef~el~~~~~aVv~CRctPtQKA 770 (1051)
T KOG0210|consen 714 GDAHNELNNLR----------------------RKTDCALVIDGESLEFCLK-YYEDEFIELVCELPAVVCCRCTPTQKA 770 (1051)
T ss_pred hHHHHHHHHhh----------------------cCCCcEEEEcCchHHHHHH-HHHHHHHHHHHhcCcEEEEecChhHHH
Confidence 3333332211 1567799999999998887 788999999999999999999999999
Q ss_pred HHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhhHHHHHHHHhhHHHHHhhhhhhhh
Q 001023 868 GIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQRMGYMILYN 947 (1185)
Q Consensus 868 ~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~lll~~Gr~~~~ri~~~i~~~ 947 (1185)
++++++|+++|+.|++||||.||++|||+||+||||-|+||.||+.||||+|.||.++.+||++|||.+|+|.++.-.|.
T Consensus 771 ~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfV 850 (1051)
T KOG0210|consen 771 QVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFV 850 (1051)
T ss_pred HHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHH
Q 001023 948 FYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFW 1027 (1185)
Q Consensus 948 ~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~ 1027 (1185)
+.+++++..++..|.....|...++|..+.|..|..++|++|++.+ +.|+|++++..+.||+||+.-.+++.++.++|+
T Consensus 851 iHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~ 929 (1051)
T KOG0210|consen 851 IHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKELTKGRSLSYKTFF 929 (1051)
T ss_pred HhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHHhcCCccchhhhh
Confidence 9999999999999999999999999999999999999999999999 779999999999999999999999999999999
Q ss_pred HHHHhHHHHHhhheeeccccccCCcccchhhhHHHHHHHHHHHHHHHHHhhccchhHhHHHHHHHHHHHHHHHHHHhccC
Q 001023 1028 LTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVP 1107 (1185)
Q Consensus 1028 ~~~~~~~~~~~vif~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~i~~si~~~~i~~~i~~~i~ 1107 (1185)
.|++.++||+.++.++.....+ .++..+.++.|+++++...+.+++++++|+|...+.-..|+.+|++.+.+
T Consensus 930 iwvLISiYQG~vim~g~~~l~~---~ef~~ivaisFtaLi~tELiMVaLtv~tw~~~m~vae~lsL~~Yivsl~~----- 1001 (1051)
T KOG0210|consen 930 IWVLISIYQGSVIMYGALLLFD---TEFIHIVAISFTALILTELIMVALTVRTWHWLMVVAELLSLALYIVSLAF----- 1001 (1051)
T ss_pred hhhhHHHHcccHHHHHHHHHhh---hhheEeeeeeeHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHH-----
Confidence 9999999999999775222211 12333567789999999999999999999999888888888877655443
Q ss_pred CCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH
Q 001023 1108 SLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYYPCDVQIAR 1158 (1185)
Q Consensus 1108 ~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f~p~~~~~~~ 1158 (1185)
+.+|+....+ .+..|+.-+.++.+++++|.++.|+++|++.|+.+.+++
T Consensus 1002 -l~~yfd~~f~-~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaKl~ 1050 (1051)
T KOG0210|consen 1002 -LHEYFDRYFI-LTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAKLQ 1050 (1051)
T ss_pred -HHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhcc
Confidence 2444323333 345555556778899999999999999999999987765
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-115 Score=1108.27 Aligned_cols=820 Identities=27% Similarity=0.399 Sum_probs=648.5
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcC-cccccCccchhhhHHHHHHHHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLP-QLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~~~~~~~~~~l~~vi~~s~i~~~~ed 164 (1185)
...|++.||.|++...+...+. +.++.||.++.++.++++++++++. .+.+.. .....++.+++++++..++++
T Consensus 50 ~~~r~~~~G~N~~~~~~~~~~~---~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~~~--~~~~~I~~~i~~n~~~g~~qe 124 (917)
T COG0474 50 VKRRLKKYGPNELPEEKKRSLL---KKFLRQFKDPFIILLLVAALLSAFVGDWVDAG--VDAIVILLVVVINALLGFVQE 124 (917)
T ss_pred HHHHHhhcCCccccccccCcHH---HHHHHHHHHHHHHHHHHHHHHHHHhhcccccC--cceeeehHHHHHHHHHHHHHH
Confidence 3447889999999977765543 8888999999999999999888763 222211 333345566666677777888
Q ss_pred HHHhhh---hHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceee
Q 001023 165 YRRHRS---DRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1185)
Q Consensus 165 ~~r~k~---d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K 241 (1185)
+|..++ .++..+.+++|+|||++++++|++|+|||||+|++||.||||++||++++ .+||||+|||||+|+.|
T Consensus 125 ~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K 200 (917)
T COG0474 125 YRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK 200 (917)
T ss_pred HHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhc
Confidence 877554 66777899999999999999999999999999999999999999999885 59999999999999999
Q ss_pred cccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhhhcc
Q 001023 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNS 321 (1185)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~~n~ 321 (1185)
++..... .|.|. .++..|++++||.+++ |.+.|+|++||.+|++++++
T Consensus 201 ~~~~~~~--------------~~~~~-----------------~~d~~n~l~sGt~V~~-G~~~giVvaTG~~T~~G~ia 248 (917)
T COG0474 201 QALPLTK--------------SDAPL-----------------GLDRDNMLFSGTTVVS-GRAKGIVVATGFETEFGKIA 248 (917)
T ss_pred ccccccc--------------ccccc-----------------cCCccceEEeCCEEEc-ceEEEEEEEEcCccHHHHHH
Confidence 9875541 11111 1567899999999998 66999999999999887776
Q ss_pred CCCC---CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHH
Q 001023 322 SGAP---SKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEIL 398 (1185)
Q Consensus 322 ~~~~---~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~ 398 (1185)
...+ ...++++++++++..+++.+.++++++.++...+.. .. . +.
T Consensus 249 ~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~-~~-------~------------------------~~ 296 (917)
T COG0474 249 RLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRG-GN-------G------------------------LL 296 (917)
T ss_pred HhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cc-------c------------------------HH
Confidence 5432 467999999999999999999988888887763321 11 0 24
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEE
Q 001023 399 FTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 478 (1185)
Q Consensus 399 ~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~ 478 (1185)
..|++++++++.+||++||+.+++++.+++.+| +++++++|+++++|+||++|+||||||||||+|+|+|
T Consensus 297 ~~~~~~v~l~va~IPegLp~~vti~la~g~~~m----------ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v 366 (917)
T COG0474 297 ESFLTALALAVAAVPEGLPAVVTIALALGAQRM----------AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTV 366 (917)
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHH----------HhccchhhccchhhhccCccEEEecCCCCCccCeEEE
Confidence 479999999999999999999999999999888 7889999999999999999999999999999999999
Q ss_pred EEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhccccccccc
Q 001023 479 RCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558 (1185)
Q Consensus 479 ~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~ 558 (1185)
++|++++. +.+. ++ ..........+++.++++||++.+
T Consensus 367 ~~~~~~~~--~~~~---------------------------~~---------~~~~~~~~~~~~l~~~~lc~~~~~---- 404 (917)
T COG0474 367 KKIYINGG--GKDI---------------------------DD---------KDLKDSPALLRFLLAAALCNSVTP---- 404 (917)
T ss_pred EEEEeCCC--cccc---------------------------cc---------cccccchHHHHHHHHHHhcCcccc----
Confidence 99999841 0000 00 001123334478999999999988
Q ss_pred CCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEE
Q 001023 559 TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTL 638 (1185)
Q Consensus 559 ~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l 638 (1185)
+.+ + .+..+||+|.||++++.+.|+.+ . . ..... .|++++.+||+|+|||||||++..++++++
T Consensus 405 ~~~---~--~~~~gdptE~Al~~~a~~~~~~~-~--~-------~~~~~-~~~~~~~~PFdS~rKrMsviv~~~~~~~~~ 468 (917)
T COG0474 405 EKN---G--WYQAGDPTEGALVEFAEKLGFSL-D--L-------SGLEV-EYPILAEIPFDSERKRMSVIVKTDEGKYIL 468 (917)
T ss_pred ccc---C--ceecCCccHHHHHHHHHhcCCcC-C--H-------HHHhh-hcceeEEecCCCCceEEEEEEEcCCCcEEE
Confidence 333 2 67789999999999999999854 1 1 11223 678899999999999999999988888999
Q ss_pred EEcCchhHHHHHHHhh-----cchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 001023 639 FVKGADTSMFSVIAKA-----LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRK 713 (1185)
Q Consensus 639 ~~KGa~~~i~~~~~~~-----~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 713 (1185)
+||||||+|+++|+.. ..++.++.+.+..++|+++|||+|++|||.+++.+... .
T Consensus 469 ~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~--------------------~ 528 (917)
T COG0474 469 FVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDD--------------------E 528 (917)
T ss_pred EEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccc--------------------h
Confidence 9999999999999851 14567788999999999999999999999776554211 1
Q ss_pred HHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHH
Q 001023 714 VASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKS 793 (1185)
Q Consensus 714 ~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~ 793 (1185)
. +.+|+||+|+|+++++||+|++|+++|+.|++|||||||+||||++||++||++||+..+.
T Consensus 529 ~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~----------------- 590 (917)
T COG0474 529 V-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEA----------------- 590 (917)
T ss_pred h-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCC-----------------
Confidence 1 5789999999999999999999999999999999999999999999999999999986432
Q ss_pred HHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH
Q 001023 794 LEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV 873 (1185)
Q Consensus 794 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~l 873 (1185)
.. +++|||.+|+.+.++ ++.+++..++ ||||+||+||+++|+.+
T Consensus 591 -----------------------------~~-~~vi~G~el~~l~~~----el~~~~~~~~--VfARvsP~qK~~IV~~l 634 (917)
T COG0474 591 -----------------------------ES-ALVIDGAELDALSDE----ELAELVEELS--VFARVSPEQKARIVEAL 634 (917)
T ss_pred -----------------------------Cc-eeEeehHHhhhcCHH----HHHHHhhhCc--EEEEcCHHHHHHHHHHH
Confidence 11 679999999998887 4555555666 99999999999999999
Q ss_pred HhhCCCeEEEEcCCcCChhhhhhcceeEEec--CcchhHHhhcCceeecchhh-HHHHHHHHhhHHHHHhhhhhhhhhhh
Q 001023 874 KTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQFRF-LVTLLLVHGHWNYQRMGYMILYNFYR 950 (1185)
Q Consensus 874 k~~~g~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~aSD~~i~~f~~-l~~lll~~Gr~~~~ri~~~i~~~~~~ 950 (1185)
|+ .|++|+|+|||+||+||||+|||||||. |+|. |++|||+++.++++ ....+++|||++|.|+++++.|.+++
T Consensus 635 q~-~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda--ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~ 711 (917)
T COG0474 635 QK-SGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA--AKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSK 711 (917)
T ss_pred Hh-CCCEEEEeCCCchhHHHHHhcCccEEecccHHHH--HHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99 7999999999999999999999999995 4555 78899999988777 44455999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHH
Q 001023 951 NAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTM 1030 (1185)
Q Consensus 951 ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~ 1030 (1185)
|+..+++++++.+++.+ ..|++++|++|+|++++++|++++|+++ ++...+++|+ .+++..+|+++.++.|+
T Consensus 712 n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~~---~~p~~~i~~~~~~~~~i 783 (917)
T COG0474 712 NVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRPP---RGPEEGLFNRKIFWRFI 783 (917)
T ss_pred HHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccCC---CCccccccchhHHHHHH
Confidence 99999999999998876 5789999999999999999999999975 4455666652 47888999999999999
Q ss_pred HhHHHHHhhheeec-cccccCC---cc----cchhhhHHHHHHHHHHHHHHHHHhhcc-chh-----HhHHHHHHHHHHH
Q 001023 1031 ADTLWQSVVIFFIP-FGAYWDS---TI----DVSSIGDLWTLAVVILVNIHLAMDVIR-WTW-----ITHAVIWGSIIAT 1096 (1185)
Q Consensus 1031 ~~~~~~~~vif~~~-~~~~~g~---~~----~~~~~~~~~~~~~v~~~~~~~~l~~~~-~~~-----~~~~~i~~si~~~ 1096 (1185)
+...+++.+++++. .+...+. .. ......+++|+.+++...+..+..... ..| +.+..+|+++++.
T Consensus 784 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 863 (917)
T COG0474 784 LIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVI 863 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHH
Confidence 88777777776552 1111111 11 144456777777777776665543222 111 2456677776666
Q ss_pred HHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHH
Q 001023 1097 LICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIIL 1132 (1185)
Q Consensus 1097 ~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~ 1132 (1185)
.++.+...+.|.... -.|.....+...|+..+.+.
T Consensus 864 ~~l~l~~~~~~~~~~-~~f~~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 864 IILQLLIIFLPPLNL-KIFQPTPLSLFEWLIAIAVA 898 (917)
T ss_pred HHHHHHHHHhHHhHh-hhccCCCCcHHHHHHHHHHH
Confidence 666655555553331 01333333455566544433
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-110 Score=972.97 Aligned_cols=882 Identities=19% Similarity=0.234 Sum_probs=679.5
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDY 165 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed~ 165 (1185)
...|++.||.|++....-..++ +.++|||.++....+|.++++++. ...|...+.+.++++++++..++|+|
T Consensus 29 v~~r~~~yG~Nel~~ee~~~~w---k~vLeQF~n~Li~iLL~sA~ISfv-----l~~~~e~~vI~liiv~nvtVG~~QEy 100 (972)
T KOG0202|consen 29 VTRRRKKYGENELPAEEGESLW---KLVLEQFDNPLILILLLSAAISFV-----LADFDEPFVITLIIVINVTVGFVQEY 100 (972)
T ss_pred HHHHHHhcCCccCccccCCcHH---HHHHHHHHhHHHHHHHHHHHHHHH-----HHhcccceeeeeeeeeeeeeeeeeeh
Confidence 3448899999999988776665 999999999999999999999998 34445666666778888888899999
Q ss_pred HHhhhhHHhh---cceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeec
Q 001023 166 RRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242 (1185)
Q Consensus 166 ~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~ 242 (1185)
+..|+..+++ +..++|+|+|+.+.++.++|+|||||.|+-||+||||++|++..+ ..||||+|||||.|+.|.
T Consensus 101 ~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~ 176 (972)
T KOG0202|consen 101 NAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKD 176 (972)
T ss_pred hhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCccccccc
Confidence 9999866554 788999999999999999999999999999999999999999887 899999999999999997
Q ss_pred ccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchh---hh
Q 001023 243 AKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV---ML 319 (1185)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki---~~ 319 (1185)
+..... .| ....-+.+|+++.|+.+++ |.+.|+|+.||.+|.+ ..
T Consensus 177 t~~v~~----------------~~---------------~~~~~dk~NiaFsGT~V~~-G~a~GIVi~TG~nTeiG~I~~ 224 (972)
T KOG0202|consen 177 TDAVPK----------------DE---------------NADVQDKKNIAFSGTLVVA-GRAKGIVIGTGLNTEIGKIFK 224 (972)
T ss_pred CccccC----------------CC---------------CCccccceeeEeecceeec-CceeEEEEeccccchHHHHHH
Confidence 654320 00 1111223555666655555 5599999999999954 22
Q ss_pred ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHH
Q 001023 320 NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399 (1185)
Q Consensus 320 n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1185)
.....+..++|+|+++|.+...+.-+..++|+..+++..-|...... ...| +.....
T Consensus 225 ~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~---~g~~--------------------fk~~~~ 281 (972)
T KOG0202|consen 225 MMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVH---GGSW--------------------FKGALY 281 (972)
T ss_pred HHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccc---cccc--------------------hhchhh
Confidence 23334666899999999999999866666666666552111110000 0123 234455
Q ss_pred HHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEE
Q 001023 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479 (1185)
Q Consensus 400 ~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~ 479 (1185)
.|..++.|.+.+||.+||+.+.+...++..+| +++++++|.+..+|+||.+++||||||||||+|+|.+.
T Consensus 282 ~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM----------akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~ 351 (972)
T KOG0202|consen 282 YFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM----------AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVS 351 (972)
T ss_pred hhhHHHHHHHHhccCCCcchhhhhHHHhHHHH----------HhhhhhhhcccchhhccceeEEecCCCCcccccceEEE
Confidence 78889999999999999999999988888766 89999999999999999999999999999999999999
Q ss_pred EEEEeceecCCCCCCCcccccccccccCCcccCCC-cccccChhHHHhhhcCCCCccchhHHHHHHHHHhhccccccccc
Q 001023 480 CASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPK-LTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558 (1185)
Q Consensus 480 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~ 558 (1185)
++++.+..+..- ++ ....+. ...+. -.+. +. . .........+.+++...+.++||.+..
T Consensus 352 ~i~~~~~~~~~~-~~----f~~tg~-----ty~~~g~v~~-~~-~----~~~~~~~~~~~l~~l~~i~~lCNda~v---- 411 (972)
T KOG0202|consen 352 KIFIPDGGTATV-DE----FNPTGT-----TYSPEGEVFK-DG-L----YEKDKAGDNDLLQELAEICALCNDATV---- 411 (972)
T ss_pred EEEecccccccc-cc----cccCCc-----eeCCCCceEe-cC-c----cccccccccHHHHHHHHHHHhhhhhhh----
Confidence 999987655422 10 000000 00000 0000 00 0 000112345668889999999999877
Q ss_pred CCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCC-eEE--EEecCceeeeEEEEEeecCCCCCceEEEEEecCCCc
Q 001023 559 TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSG-HIV--IDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKT 635 (1185)
Q Consensus 559 ~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~-~~~--i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~ 635 (1185)
+.++. +.++- -+.|.|.||...|.+.|+.-...+.. ... .+..-..+ .++....+||+|+||+|||++.++.++
T Consensus 412 ~~~~~-~~~~~-~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~-~~~~~~elpFssdrK~Msv~c~~~~~~ 488 (972)
T KOG0202|consen 412 EYNDA-DCYEK-VGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSR-LFKKIAELPFSSDRKSMSVKCSPAHGQ 488 (972)
T ss_pred hcCch-hhHHh-cCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHH-hhhheeEeecccccceEEEEEecCCCC
Confidence 54443 33332 36899999999999999865431110 000 00000123 566779999999999999999987665
Q ss_pred --EEEEEcCchhHHHHHHHhhc----------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCH---HHHHHHHHHHHHH
Q 001023 636 --VTLFVKGADTSMFSVIAKAL----------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSA---SEFEQWQSSFEAA 700 (1185)
Q Consensus 636 --~~l~~KGa~~~i~~~~~~~~----------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~---~e~~~~~~~~~~a 700 (1185)
..+|+|||+|.|+++|+..+ ++..++.+.+...+++++|||+|++|++..+. ++...|.
T Consensus 489 ~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~------ 562 (972)
T KOG0202|consen 489 SGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLND------ 562 (972)
T ss_pred ccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcc------
Confidence 89999999999999996542 34578899999999999999999999997663 1111110
Q ss_pred HhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEE
Q 001023 701 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 780 (1185)
Q Consensus 701 ~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~ 780 (1185)
.. -....|.||+|+|++|+-||+|++|+++|+.|++|||+|.|+|||+++||.+||+++|+...+.+
T Consensus 563 ---~s--------~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed-- 629 (972)
T KOG0202|consen 563 ---TS--------NRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDED-- 629 (972)
T ss_pred ---cc--------cccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCcc--
Confidence 00 12567999999999999999999999999999999999999999999999999999999875421
Q ss_pred EEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe
Q 001023 781 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR 860 (1185)
Q Consensus 781 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r 860 (1185)
-...+++|++++.+.++++.+... .+ .+|+|
T Consensus 630 -------------------------------------------~~~~~~TG~efD~ls~~~~~~~~~----~~--~vFaR 660 (972)
T KOG0202|consen 630 -------------------------------------------VSSMALTGSEFDDLSDEELDDAVR----RV--LVFAR 660 (972)
T ss_pred -------------------------------------------ccccccchhhhhcCCHHHHHHHhh----cc--eEEEe
Confidence 112367899988777766554433 33 39999
Q ss_pred cCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe--cCcchhHHhhcCceeecchhhHHHHH-HHHhhHHH
Q 001023 861 VAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTLL-LVHGHWNY 937 (1185)
Q Consensus 861 ~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~f~~l~~ll-l~~Gr~~~ 937 (1185)
++|.+|.+||+.||+ .|.+|+|+|||+||+||||.|||||+| +|++. |++|||+++.|++|...+- +.+||.+|
T Consensus 661 ~~P~HK~kIVeaLq~-~geivAMTGDGVNDApALK~AdIGIAMG~~GTdV--aKeAsDMVL~DDnFstIvaAVEEGr~Iy 737 (972)
T KOG0202|consen 661 AEPQHKLKIVEALQS-RGEVVAMTGDGVNDAPALKKADIGIAMGISGTDV--AKEASDMVLADDNFSTIVAAVEEGRAIY 737 (972)
T ss_pred cCchhHHHHHHHHHh-cCCEEEecCCCccchhhhhhcccceeecCCccHh--hHhhhhcEEecCcHHHHHHHHHHhHHHH
Confidence 999999999999999 899999999999999999999999977 78888 9999999999988854432 88999999
Q ss_pred HHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccC
Q 001023 938 QRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHR 1017 (1185)
Q Consensus 938 ~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~ 1017 (1185)
.||+++|.|.+..|+......|+...+. .+.++++.|++|.|++++.+|+.++|+.. ++.+.+.+.|+ ..+
T Consensus 738 nNik~Fir~~lSsnVgev~~I~l~aa~~---~p~pL~pvQiLWiNlvtDG~PA~aLG~ep--~D~DiM~kpPR----~~~ 808 (972)
T KOG0202|consen 738 NNIKNFIRYLLSSNVGEVVLIFLTAAFG---IPEPLIPVQILWINLVTDGPPATALGFEP--VDPDIMKKPPR----DSK 808 (972)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhC---CCCcccchhhheeeeeccCCchhhcCCCC--CChhHHhCCCC----CCC
Confidence 9999999999999999998888887764 56889999999999999999999999853 34555555566 788
Q ss_pred CcccchhHHHHHHHhHHHHHhhheeec--cccc-cCCcccchhh----------------------hHHHHHHHHHHHHH
Q 001023 1018 QECYNTKLFWLTMADTLWQSVVIFFIP--FGAY-WDSTIDVSSI----------------------GDLWTLAVVILVNI 1072 (1185)
Q Consensus 1018 ~~~~~~~~~~~~~~~~~~~~~vif~~~--~~~~-~g~~~~~~~~----------------------~~~~~~~~v~~~~~ 1072 (1185)
+.+++++.|+.++..|+|.++.+...+ ++.. +|.. ..... ..+|.++++.+..+
T Consensus 809 ~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~v-t~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~em 887 (972)
T KOG0202|consen 809 DGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKV-TYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEM 887 (972)
T ss_pred CCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCc-ChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHH
Confidence 899999999999999999888775542 2221 2221 11111 11333344455567
Q ss_pred HHHHhhccch-------hHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001023 1073 HLAMDVIRWT-------WITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFL 1145 (1185)
Q Consensus 1073 ~~~l~~~~~~-------~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~ 1145 (1185)
..++...+++ .+.+.++.+++++.++..+...|+|+++. .|.....++..|+.++.+....++.++++|++
T Consensus 888 fNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~--iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~ 965 (972)
T KOG0202|consen 888 FNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQR--IFQTEPLSLAEWLLVLAISSPVIIVDEILKFI 965 (972)
T ss_pred HHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhh--hheecCCcHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 7777766654 46678888899999999999999998887 47777889999999999999999999999999
Q ss_pred HHhhC
Q 001023 1146 YQYYY 1150 (1185)
Q Consensus 1146 ~r~f~ 1150 (1185)
.|.+.
T Consensus 966 ~R~~~ 970 (972)
T KOG0202|consen 966 ARNYF 970 (972)
T ss_pred HHhcc
Confidence 99874
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-107 Score=1048.98 Aligned_cols=901 Identities=17% Similarity=0.189 Sum_probs=658.6
Q ss_pred eCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHH
Q 001023 81 INDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKD 160 (1185)
Q Consensus 81 ~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~ 160 (1185)
+++.+...|+++||+|+++..+.+.++ +.+++||..+.+++++++++++++ .+.|...+.++++++++++..
T Consensus 27 Ls~~ea~~rl~~~G~N~l~~~~~~s~~---~~~l~q~~~~~~~iL~~aails~~-----~~~~~~~~iIl~vv~in~~i~ 98 (1053)
T TIGR01523 27 LTHDEAQHRLKEVGENRLEADSGIDAK---AMLLHQVCNAMCMVLIIAAAISFA-----MHDWIEGGVISAIIALNILIG 98 (1053)
T ss_pred CCHHHHHHHHHHcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHH-----HhhHHHHHHHHhHHHHHHHHH
Confidence 344444558899999999998765543 889999999999999999999988 467888888999999999999
Q ss_pred HHHHHHHhhhhHHh---hcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCC
Q 001023 161 AYEDYRRHRSDRIE---NNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESN 237 (1185)
Q Consensus 161 ~~ed~~r~k~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~ 237 (1185)
++++++..++...+ .+.+++|+|||++++|+.++|+|||||.|++||.||||++|+++++ +.||||+|||||.
T Consensus 99 ~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~ 174 (1053)
T TIGR01523 99 FIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESL 174 (1053)
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCC
Confidence 99999999986544 4678999999999999999999999999999999999999999766 9999999999999
Q ss_pred ceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeee-cCCCceEeecceeecCCeEEEEEEEecccch
Q 001023 238 LKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLS-LGPSNILLRGCELKNTSWALGVAVYAGQETK 316 (1185)
Q Consensus 238 ~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~-l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tk 316 (1185)
|+.|.+..... + +...+ .+..|++++||.+.+ |.+.|+|++||.+|.
T Consensus 175 pV~K~~~~~~~-----------------~--------------~~~~~~~d~~n~lf~GT~V~~-G~g~~vVvatG~~T~ 222 (1053)
T TIGR01523 175 PVIKDAHATFG-----------------K--------------EEDTPIGDRINLAFSSSAVTK-GRAKGICIATALNSE 222 (1053)
T ss_pred ceecccccccc-----------------c--------------cccCCcccCCCccccCceEEe-eeEEEEEEEecCccH
Confidence 99998642110 0 00011 123566666666664 559999999999995
Q ss_pred hhhc---cCCC-----------C------------------------CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001023 317 VMLN---SSGA-----------P------------------------SKRSWLEMHMNSEIIKLSFFLVALCTVVSICAA 358 (1185)
Q Consensus 317 i~~n---~~~~-----------~------------------------~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~ 358 (1185)
+.+. .... + ..+||++++++++..+++.+.++++++.++...
T Consensus 223 ~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~ 302 (1053)
T TIGR01523 223 IGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK 302 (1053)
T ss_pred HHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5322 2110 0 014999999999999988888877777655322
Q ss_pred hhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhcccccc
Q 001023 359 VWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMY 438 (1185)
Q Consensus 359 ~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~ 438 (1185)
+ . + ....+..++.+.+.++|++||+.+.++..+++.+|
T Consensus 303 ~----~--------~-----------------------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM------- 340 (1053)
T TIGR01523 303 F----D--------V-----------------------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANM------- 340 (1053)
T ss_pred h----h--------h-----------------------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-------
Confidence 1 0 0 01245678899999999999999999999998877
Q ss_pred ccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEece-ecCCCC--CCCccc-ccccccccCCcccCC-
Q 001023 439 DEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGI-DYSGGN--ARSHSE-EVGYSVQVDGKVLRP- 513 (1185)
Q Consensus 439 ~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~-~y~~~~--~~~~~~-~~~~~~~~~~~~~~~- 513 (1185)
+++++++|+++.+|+||.+++||+|||||||+|+|+++++++++. .|.... +..... ..-.+.+.. .+...
T Consensus 341 ---ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~ 416 (1053)
T TIGR01523 341 ---SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRF-SPYEYS 416 (1053)
T ss_pred ---HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccc-cccccc
Confidence 889999999999999999999999999999999999999998752 221100 000000 000000000 00000
Q ss_pred CcccccChhHHHhh-h--cCCC---CccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcC
Q 001023 514 KLTVNVDPHLLQLS-R--SGKN---TEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYG 587 (1185)
Q Consensus 514 ~~~~~~d~~l~~~~-~--~~~~---~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g 587 (1185)
..+.. ++++.... + ...+ ....+...+++.+.++||++.. ..+++.+... ..++|+|.||+++|.+.|
T Consensus 417 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~----~~~~~~~~~~-~~GdptE~ALl~~a~~~g 490 (1053)
T TIGR01523 417 HNEAA-DQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATV----FKDDATDCWK-AHGDPTEIAIHVFAKKFD 490 (1053)
T ss_pred ccccc-cccccccccccccccccccccccHHHHHHHHHHHhccCCee----eccCCCCcee-eCcCccHHHHHHHHHHcC
Confidence 00000 00000000 0 0000 0012345678999999998876 2221122222 247999999999999998
Q ss_pred CEEEEe---------cC-CeEEEE---ecCceeeeEEEEEeecCCCCCceEEEEEecCCC-cEEEEEcCchhHHHHHHHh
Q 001023 588 FMLIER---------TS-GHIVID---IQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDK-TVTLFVKGADTSMFSVIAK 653 (1185)
Q Consensus 588 ~~~~~r---------~~-~~~~i~---~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~l~~KGa~~~i~~~~~~ 653 (1185)
+..... .+ ....+. ..+... .|++++.+||+|+|||||++++++++ ++++|+|||||.|+++|+.
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~ 569 (1053)
T TIGR01523 491 LPHNALTGEEDLLKSNENDQSSLSQHNEKPGSA-QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSS 569 (1053)
T ss_pred CCcccccchhhhhhhcccccccccccccccccc-ccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhH
Confidence 742100 00 000111 111234 78999999999999999999997655 5899999999999999974
Q ss_pred hc----------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcE
Q 001023 654 AL----------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLC 723 (1185)
Q Consensus 654 ~~----------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~ 723 (1185)
.. +++.++.+.+++++|+++|+|||++|||.++++++..+ .+. ....+| +.+|+||+
T Consensus 570 ~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~---~~~~~~--------~~~e~~L~ 636 (1053)
T TIGR01523 570 SNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLK---NETLNR--------ATAESDLE 636 (1053)
T ss_pred hhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhh---ccccch--------hhhccCCE
Confidence 31 23456788889999999999999999999987654321 110 000111 35799999
Q ss_pred EEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcc
Q 001023 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKK 803 (1185)
Q Consensus 724 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 803 (1185)
|+|+++++|++|++|+++|+.|++|||||||+|||+++||.+||++|||++++... ...
T Consensus 637 ~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~---~~~------------------ 695 (1053)
T TIGR01523 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIH---DRD------------------ 695 (1053)
T ss_pred EEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccc---ccc------------------
Confidence 99999999999999999999999999999999999999999999999998643110 000
Q ss_pred cccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEE
Q 001023 804 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLA 883 (1185)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~ 883 (1185)
......+++|.+++.+.++++++ +...+ .||||++|+||.++|+.+|+ .|++|+|
T Consensus 696 ------------------~~~~~~vitG~~l~~l~~~~l~~----~~~~~--~V~ar~sP~~K~~iV~~lq~-~g~~Vam 750 (1053)
T TIGR01523 696 ------------------EIMDSMVMTGSQFDALSDEEVDD----LKALC--LVIARCAPQTKVKMIEALHR-RKAFCAM 750 (1053)
T ss_pred ------------------ccccceeeehHHhhhcCHHHHHH----HhhcC--eEEEecCHHHHHHHHHHHHh-cCCeeEE
Confidence 00123699999999877655443 33333 49999999999999999999 8999999
Q ss_pred EcCCcCChhhhhhcceeEEe--cCcchhHHhhcCceeecc--hhhHHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHH
Q 001023 884 IGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 959 (1185)
Q Consensus 884 iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~ 959 (1185)
+|||+||+|||++|||||+| +|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+
T Consensus 751 ~GDGvNDapaLk~AdVGIAmg~~gt~v--ak~aADivl~dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~ 827 (1053)
T TIGR01523 751 TGDGVNDSPSLKMANVGIAMGINGSDV--AKDASDIVLSDDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLI 827 (1053)
T ss_pred eCCCcchHHHHHhCCccEecCCCccHH--HHHhcCEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999987 57776 99999999988 5558887 899999999999999999999999999999
Q ss_pred HHHHHhhccch--hhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHHHH
Q 001023 960 WYVLFTAFTLT--TAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQS 1037 (1185)
Q Consensus 960 ~~~~~~~fs~~--~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~ 1037 (1185)
++.++..++|. .++++++++|+|++++.+|++++|+. ++.++.+.+.|+ .++..++++..++.+++.|++.+
T Consensus 828 ~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e--~~~~~~m~~~Pr----~~~~~l~~~~~~~~~~~~g~~~~ 901 (1053)
T TIGR01523 828 IGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE--KAAPDLMDRLPH----DNEVGIFQKELIIDMFAYGFFLG 901 (1053)
T ss_pred HHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC--CCChhHHhcCCC----CCCccccCHHHHHHHHHHHHHHH
Confidence 99998877775 47889999999999999999999983 334444444555 45667999988888899999888
Q ss_pred hhheeeccc---cc-cCCc------------ccchhhhHHHHHHHHHHHHHHHHHhhcc-----ch--------------
Q 001023 1038 VVIFFIPFG---AY-WDST------------IDVSSIGDLWTLAVVILVNIHLAMDVIR-----WT-------------- 1082 (1185)
Q Consensus 1038 ~vif~~~~~---~~-~g~~------------~~~~~~~~~~~~~~v~~~~~~~~l~~~~-----~~-------------- 1082 (1185)
++.+..+++ .. .|.. .+...-.++.|+++++...+. ++.+++ |.
T Consensus 902 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~ 980 (1053)
T TIGR01523 902 GSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALIL-AVEVKDFDNSFFNLHGIPDGDSNFKEF 980 (1053)
T ss_pred HHHHHHHHHHHHhccCccccccccccccccccchhhhHHHHHHHHHHHHHHH-HHHHhcCchhhhhcCcccccccccccc
Confidence 776554321 10 1110 011222455566655554443 333332 11
Q ss_pred ---hHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001023 1083 ---WITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYY 1149 (1185)
Q Consensus 1083 ---~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f 1149 (1185)
.+.+.++|+++++.+++++...++|.++.. +|...+.++ .|+.++.+.++.++..++.|+++|++
T Consensus 981 ~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~-~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 981 FHSIVENKFLAWAIAFAAVSAFPTIYIPVINDD-VFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred ccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhh-hhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 235677888888888888888888877531 244444444 78888878888888899999888766
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-107 Score=1050.93 Aligned_cols=877 Identities=18% Similarity=0.194 Sum_probs=668.0
Q ss_pred EeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCc-cc-------ccCccchhhhHHH
Q 001023 80 YINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ-LA-------VFGRGVSILPLAF 151 (1185)
Q Consensus 80 ~~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~-~~-------~~~~~~~~~~l~~ 151 (1185)
.+++.+.++|+++||+|+++..+.+.++ +.+++||.++.++.++++++++++.. +. ..+.|...+++++
T Consensus 36 GLs~~e~~~rl~~~G~N~l~~~~~~~~~---~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 112 (997)
T TIGR01106 36 GLSAARAAEILARDGPNALTPPPTTPEW---VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSA 112 (997)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHH
Confidence 3444455558899999999887766543 88999999999999999998876521 10 1135677788999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHhhc---ceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEE
Q 001023 152 VLSVTAIKDAYEDYRRHRSDRIENN---RLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQ 228 (1185)
Q Consensus 152 vi~~s~i~~~~ed~~r~k~d~~~n~---~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vd 228 (1185)
+++++++.++++++|++++++.+++ .+++|+|||++++|++++|+|||+|.|++||.||||++|+++++ +.||
T Consensus 113 vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~Vd 188 (997)
T TIGR01106 113 VVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVD 188 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEE
Confidence 9999999999999999999887664 58999999999999999999999999999999999999999764 8999
Q ss_pred eccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEE
Q 001023 229 TINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVA 308 (1185)
Q Consensus 229 ts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvV 308 (1185)
||+|||||.|+.|.+++.. ..|++.+|++++||.+.. |++.|+|
T Consensus 189 eS~LTGES~pv~K~~~~~~-----------------------------------~~~~~~~n~l~~Gt~v~~-G~~~~~V 232 (997)
T TIGR01106 189 NSSLTGESEPQTRSPEFTH-----------------------------------ENPLETRNIAFFSTNCVE-GTARGIV 232 (997)
T ss_pred ccccCCCCCceeccCCCcc-----------------------------------cCccccCCeEEeccEeee-eeEEEEE
Confidence 9999999999999875321 124566788888888776 7899999
Q ss_pred EEecccchhhhccC---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCC
Q 001023 309 VYAGQETKVMLNSS---GAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEP 385 (1185)
Q Consensus 309 v~tG~~Tki~~n~~---~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~ 385 (1185)
++||.+|++.+... ..+.+++++++.++++...+..+.++++++.++++.+.. ..|
T Consensus 233 ~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~------------ 291 (997)
T TIGR01106 233 VNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG---------YTW------------ 291 (997)
T ss_pred EEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCH------------
Confidence 99999997765544 556678999999999999988888777776665543321 011
Q ss_pred CCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEE
Q 001023 386 DNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFS 465 (1185)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~s 465 (1185)
...+..++.+++.+||++|+++++++...++.++ +++++++|+++.+|+||+|++|||
T Consensus 292 ------------~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m----------~~~~ilvk~~~aiE~lg~v~~ic~ 349 (997)
T TIGR01106 292 ------------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICS 349 (997)
T ss_pred ------------HHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH----------HHCCcEecCcHHHHHhcCCCEEEE
Confidence 2255667888888999999999999999888776 788999999999999999999999
Q ss_pred cCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHH
Q 001023 466 DKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLA 545 (1185)
Q Consensus 466 DKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~ 545 (1185)
|||||||+|+|+|.+++++|..|..+... +.. +. .........+.++.+
T Consensus 350 DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------------------------~~~-----~~-~~~~~~~~~~~ll~~ 398 (997)
T TIGR01106 350 DKTGTLTQNRMTVAHMWFDNQIHEADTTE-------------------------DQS-----GV-SFDKSSATWLALSRI 398 (997)
T ss_pred CCCCceecCceEEEEEEECCeEEecCCcc-------------------------CCC-----Cc-cCCcccHHHHHHHHH
Confidence 99999999999999999988776432100 000 00 000112334578889
Q ss_pred HHhhcccccccccCCCCCC--cceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCc
Q 001023 546 LAACNTIVPLVVDTSDPNV--KLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRK 623 (1185)
Q Consensus 546 la~Cht~~~~~~~~~~~~~--~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rk 623 (1185)
+++||++.+ ..+.+. ..-.+..++|+|.||++++...+... ...+. .|+.++.+||+|+||
T Consensus 399 ~alcn~~~~----~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~------------~~~~~-~~~~v~~~pF~s~rK 461 (997)
T TIGR01106 399 AGLCNRAVF----KAGQENVPILKRAVAGDASESALLKCIELCLGSV------------MEMRE-RNPKVVEIPFNSTNK 461 (997)
T ss_pred HHHcCCCee----ccccCCCcccccccCcChHHHHHHHHHHHhCCCH------------HHHHh-hCceeEEeccCCCCc
Confidence 999998876 211110 00124467999999999998644321 11234 788899999999999
Q ss_pred eEEEEEecC---CCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHH
Q 001023 624 RMSVILGLP---DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQ 692 (1185)
Q Consensus 624 rmsviv~~~---~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~ 692 (1185)
||+++++.. ++++++|+|||||.|+++|+... +++.++.+.+++++|+++|+|||++|||.++++++.+
T Consensus 462 ~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~ 541 (997)
T TIGR01106 462 YQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPE 541 (997)
T ss_pred eEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccc
Confidence 999988643 35789999999999999997421 2345677889999999999999999999998765432
Q ss_pred -HHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcC
Q 001023 693 -WQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSK 771 (1185)
Q Consensus 693 -~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~g 771 (1185)
|.. +++ ..+.+|+||+|+|+++++||+|++|+++|++|+++||+|||+|||+..||.++|+++|
T Consensus 542 ~~~~----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~g 606 (997)
T TIGR01106 542 GFQF----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 606 (997)
T ss_pred cccc----------cch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 211 010 0134589999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhc
Q 001023 772 LLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAG 851 (1185)
Q Consensus 772 ll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~ 851 (1185)
+++++.+. .++..+.+. ... ...+ ......++++|++++.+.+++ +.+++.
T Consensus 607 i~~~~~~~-------~~~i~~~~~--------~~~----~~~~------~~~~~~~vi~G~~l~~l~~~e----l~~~~~ 657 (997)
T TIGR01106 607 IISEGNET-------VEDIAARLN--------IPV----SQVN------PRDAKACVVHGSDLKDMTSEQ----LDEILK 657 (997)
T ss_pred CCCCCccc-------hhhhhhhcc--------ccc----cccc------cccccceEEEhHHhhhCCHHH----HHHHHH
Confidence 99765431 011111000 000 0000 011224799999999877654 555666
Q ss_pred cCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe--cCcchhHHhhcCceeecc--hhhHHH
Q 001023 852 TCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQ--FRFLVT 927 (1185)
Q Consensus 852 ~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~--f~~l~~ 927 (1185)
.++.+||||++|+||+++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|+ |+++||+++.+ |+.+.+
T Consensus 658 ~~~~~VfaR~sPeqK~~IV~~lq~-~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~v--ak~aADivL~dd~f~~Iv~ 734 (997)
T TIGR01106 658 YHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVT 734 (997)
T ss_pred hcCCEEEEECCHHHHHHHHHHHHH-CCCEEEEECCCcccHHHHhhCCcceecCCcccHH--HHHhhceEEecCCHHHHHH
Confidence 677789999999999999999999 899999999999999999999999976 58888 89999999999 555788
Q ss_pred HHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhc
Q 001023 928 LLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQ 1007 (1185)
Q Consensus 928 lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~ 1007 (1185)
+ +.|||++|.|+++++.|.+++|+..+++.+++.++. ..+++++++++|+|++++++|+++++.. +++++.+.+
T Consensus 735 a-i~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qlL~inli~d~lp~~al~~e--~~~~~~m~~ 808 (997)
T TIGR01106 735 G-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN---IPLPLGTITILCIDLGTDMVPAISLAYE--KAESDIMKR 808 (997)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc---CcchhHHHHHHHHHHHHHHHHHHHHhcC--CCCcccccC
Confidence 7 999999999999999999999999999999998876 3457899999999999999999999983 455565556
Q ss_pred CCcccccccCCcccchhHHHHHH-HhHHHHHhhheeecccc--ccCCc----c----------------c------c---
Q 001023 1008 NPQLYGAGHRQECYNTKLFWLTM-ADTLWQSVVIFFIPFGA--YWDST----I----------------D------V--- 1055 (1185)
Q Consensus 1008 ~P~ly~~~~~~~~~~~~~~~~~~-~~~~~~~~vif~~~~~~--~~g~~----~----------------~------~--- 1055 (1185)
.|+ ..+...+++++.++.|+ ..|++++++.|+++++. ..|.. + . .
T Consensus 809 ~P~---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 885 (997)
T TIGR01106 809 QPR---NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQR 885 (997)
T ss_pred CCc---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcc
Confidence 676 22456889888887765 45888887666543211 00100 0 0 0
Q ss_pred ----hhhhHHHHHHHHHHHHHHHHHhhcc--chh----HhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHH
Q 001023 1056 ----SSIGDLWTLAVVILVNIHLAMDVIR--WTW----ITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFW 1125 (1185)
Q Consensus 1056 ----~~~~~~~~~~~v~~~~~~~~l~~~~--~~~----~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~w 1125 (1185)
....+++|+++++...+.. +.+++ .+. ..+..+|+++++.+++..+..++|.++. .|.....++..|
T Consensus 886 ~~~~~~~~t~~f~~~v~~q~~~~-~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w 962 (997)
T TIGR01106 886 KYVEFTCHTAFFVSIVVVQWADL-IICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMGV--ALRMYPLKPTWW 962 (997)
T ss_pred cchhhhhhHHHHHHHHHHHHHHH-HHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhHH--HhccccCCHHHH
Confidence 0245677777776655544 33333 121 3456677777766666666667776555 355666778899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 001023 1126 FCLMIILVAALIPRFLVKFLYQYY 1149 (1185)
Q Consensus 1126 l~~llv~~~~~l~~~~~k~~~r~f 1149 (1185)
+.++.+.++.++..++.|+++|++
T Consensus 963 ~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 963 FCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 998888888888889999888765
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-105 Score=1027.36 Aligned_cols=859 Identities=20% Similarity=0.243 Sum_probs=651.7
Q ss_pred HHHHhhHHHHHHHHHHHHHhhcCcccc-----cCccchhhhHHHHHHHHHHHHHHHHHHHhhhhHHhh---cceEEEEeC
Q 001023 113 LFEQFHRVAYIYFLVIAVLNQLPQLAV-----FGRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIEN---NRLANVLVN 184 (1185)
Q Consensus 113 l~~qf~~~~n~~fl~~~il~~~~~~~~-----~~~~~~~~~l~~vi~~s~i~~~~ed~~r~k~d~~~n---~~~~~V~r~ 184 (1185)
+++||+++.+++++++++++++.++.+ .+.|...+.++++++++++..++++++..++.+.+. +.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 468999999999999999999864322 235667778888999999999999999988865554 678999999
Q ss_pred CeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEec
Q 001023 185 NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCE 264 (1185)
Q Consensus 185 g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e 264 (1185)
|+++++++++|+|||||.|++||.+|||++|+++++ |.||||+|||||.|+.|.+....
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~~----------------- 139 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESVP----------------- 139 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCcccccccccC-----------------
Confidence 999999999999999999999999999999999764 99999999999999999875321
Q ss_pred CCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhh---hccCCCCCCcCHHHHHHHHHHHH
Q 001023 265 KPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM---LNSSGAPSKRSWLEMHMNSEIIK 341 (1185)
Q Consensus 265 ~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~---~n~~~~~~k~s~le~~~~~~~~~ 341 (1185)
+....+.+.+|++++||.+.+ |++.|+|++||.+|++. ++...++.++++++++++++...
T Consensus 140 ---------------~~~~~~~~~~n~l~~GT~v~~-G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~ 203 (917)
T TIGR01116 140 ---------------DERAVNQDKKNMLFSGTLVVA-GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGEL 203 (917)
T ss_pred ---------------ccccCcccccceeeeCCEEec-ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHH
Confidence 001123456788999999987 78999999999999665 46667778899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHH
Q 001023 342 LSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISME 421 (1185)
Q Consensus 342 l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~ 421 (1185)
++.+.++++++.++++..+.... .. ...+...++..+..++.+++.+||++||++++
T Consensus 204 l~~~~~~~~~i~~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vt 260 (917)
T TIGR01116 204 LSKVIGLICILVWVINIGHFNDP-------------AL----------GGGWIQGAIYYFKIAVALAVAAIPEGLPAVIT 260 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-------------cc----------cchhHHHHHHHHHHHHhhhhhccccccHHHHH
Confidence 98887777777665443211000 00 00112233445667889999999999999999
Q ss_pred HHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccc
Q 001023 422 LVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVG 501 (1185)
Q Consensus 422 l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~ 501 (1185)
++...++.+| +++++++|+++.+|+||++|+||||||||||+|+|++.+++..+..+... ... .
T Consensus 261 i~l~~~~~~m----------~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~-~~~----~- 324 (917)
T TIGR01116 261 TCLALGTRKM----------AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL-NEF----C- 324 (917)
T ss_pred HHHHHHHHHH----------HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc-ceE----E-
Confidence 9999998877 77899999999999999999999999999999999999998766432100 000 0
Q ss_pred cccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHH
Q 001023 502 YSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVY 581 (1185)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~ 581 (1185)
..+....+ .....+. ............++++.++++||++.. +.+++.+..+. .++|+|.||++
T Consensus 325 ----~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~l~~~~~lc~~~~~----~~~~~~~~~~~-~gdp~E~ALl~ 388 (917)
T TIGR01116 325 ----VTGTTYAP------EGGVIKD-DGPVAGGQDAGLEELATIAALCNDSSL----DFNERKGVYEK-VGEATEAALKV 388 (917)
T ss_pred ----ecCCccCC------Ccccccc-CCcccccchHHHHHHHHHHHhcCCCee----eccccCCceee-ccChhHHHHHH
Confidence 00000000 0000000 000001123446678999999999876 32222222221 37999999999
Q ss_pred HHHHcCCEEEEecCCeEEEEecC----ceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhc--
Q 001023 582 AAAAYGFMLIERTSGHIVIDIQG----QRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL-- 655 (1185)
Q Consensus 582 ~a~~~g~~~~~r~~~~~~i~~~g----~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~-- 655 (1185)
++.+.|+....+.++.+.....+ .+. .|++++.+||+|+||||||++++ ++++.+|+|||||.|+++|+...
T Consensus 389 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~ 466 (917)
T TIGR01116 389 LVEKMGLPATKNGVSSKRRPALGCNSVWND-KFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNG 466 (917)
T ss_pred HHHHcCCCchhcccccccccccchhHHHHh-hcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecC
Confidence 99999987766555444443333 134 68899999999999999999986 46789999999999999997421
Q ss_pred -------chhhHHHHHHHHHHHhh-cCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEe
Q 001023 656 -------NMNVIRGTESHLHAYSS-LGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGA 727 (1185)
Q Consensus 656 -------~~~~~~~~~~~l~~~a~-~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~ 727 (1185)
+++.++++.+++++|++ +|+|||++|||.+++++.. +. ..+. ...+.+|+||+|+|+
T Consensus 467 ~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~-~~---------~~~~-----~~~~~~e~~l~~lGl 531 (917)
T TIGR01116 467 DGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREE-DL---------LSDP-----ANFEAIESDLTFIGV 531 (917)
T ss_pred CCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccc-cc---------cccc-----hhhhhhcCCcEEEEE
Confidence 23456788899999999 9999999999999764321 10 0010 122568999999999
Q ss_pred eecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccC
Q 001023 728 SGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTV 807 (1185)
Q Consensus 728 ~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 807 (1185)
++++||+|+|++++|+.|++|||++||+|||+.+||.+||+++|+..++.++
T Consensus 532 ~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v---------------------------- 583 (917)
T TIGR01116 532 VGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDV---------------------------- 583 (917)
T ss_pred eeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccc----------------------------
Confidence 9999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCC
Q 001023 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDG 887 (1185)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG 887 (1185)
....++|+++..+.++++.. ..++.+||||++|+||.++|+.+|+ .|++|+|+|||
T Consensus 584 -----------------~~~~~~g~~l~~~~~~~~~~------~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~va~iGDG 639 (917)
T TIGR01116 584 -----------------TFKSFTGREFDEMGPAKQRA------ACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDG 639 (917)
T ss_pred -----------------cceeeeHHHHhhCCHHHHHH------hhhcCeEEEecCHHHHHHHHHHHHh-cCCeEEEecCC
Confidence 12357777776654433222 2345669999999999999999998 89999999999
Q ss_pred cCChhhhhhcceeEEe-cCcchhHHhhcCceeecc--hhhHHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHH
Q 001023 888 ANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLF 964 (1185)
Q Consensus 888 ~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~ 964 (1185)
+||++||++|||||++ +|++. |+++||+++.+ |+.+.++ +.|||++|+|+++++.|.+++|+..+++.+++.++
T Consensus 640 ~ND~~alk~AdVGia~g~g~~~--ak~aAD~vl~dd~f~~i~~~-i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 716 (917)
T TIGR01116 640 VNDAPALKKADIGIAMGSGTEV--AKEASDMVLADDNFATIVAA-VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAAL 716 (917)
T ss_pred cchHHHHHhCCeeEECCCCcHH--HHHhcCeEEccCCHHHHHHH-HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999999999999999 67776 88999999998 7778888 79999999999999999999999999999998876
Q ss_pred hhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHHHHhhheeec
Q 001023 965 TAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIP 1044 (1185)
Q Consensus 965 ~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~vif~~~ 1044 (1185)
. ...++++++++|+|++++.+|++++++++. +++.+.+.|+ .+++.++++++++.|++.|++++++.++.+
T Consensus 717 ~---~~~pl~~~qll~inli~d~lp~~~l~~~~~--~~~~m~~pP~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~ 787 (917)
T TIGR01116 717 G---IPEGLIPVQLLWVNLVTDGLPATALGFNPP--DKDIMWKPPR----RPDEPLITGWLFFRYLVVGVYVGLATVGGF 787 (917)
T ss_pred c---CCchHHHHHHHHHHHHHHHHHHHHHhcCCc--chhHhcCCCC----CCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 336899999999999999999999998543 3444445555 467789999999999999999998754332
Q ss_pred cccc--cCC--------------c-------ccchhhhHHHHHHHHHHHHHHHHHhhccc--h-----hHhHHHHHHHHH
Q 001023 1045 FGAY--WDS--------------T-------IDVSSIGDLWTLAVVILVNIHLAMDVIRW--T-----WITHAVIWGSII 1094 (1185)
Q Consensus 1045 ~~~~--~g~--------------~-------~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~-----~~~~~~i~~si~ 1094 (1185)
.+.. .|. . .+...-.++.|+++++...+. ++.+++. + .+.+.++|++++
T Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~ 866 (917)
T TIGR01116 788 VWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFN-ALNALSEDQSLLRMPPWVNKWLIGAIC 866 (917)
T ss_pred HHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHH-HHHHcCCcccccccCCccCHHHHHHHH
Confidence 1100 010 0 011223466666666654444 4444442 1 134567777777
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001023 1095 ATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQ 1147 (1185)
Q Consensus 1095 ~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r 1147 (1185)
+.++++++..++|.++. .|......+..|+.++...++.++..++.|+++|
T Consensus 867 ~~~~l~~~~~~v~~~~~--~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 867 LSMALHFLILYVPFLSR--IFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHhHHHHH--HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77777777777886654 4566667899999998888888888888887763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-105 Score=1024.64 Aligned_cols=833 Identities=21% Similarity=0.252 Sum_probs=629.5
Q ss_pred CCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcc-----c---ccCccch----hhhHH
Q 001023 83 DPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL-----A---VFGRGVS----ILPLA 150 (1185)
Q Consensus 83 ~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~-----~---~~~~~~~----~~~l~ 150 (1185)
+.+..+|+++||+|+++..+.+.++ +.+++||+++.+++++++++++++.++ + +...|.. +++++
T Consensus 63 ~~ev~~r~~~yG~N~l~~~~~~s~~---~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~ 139 (941)
T TIGR01517 63 SSTLERREKVYGKNELPEKPPKSFL---QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVI 139 (941)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHH
Confidence 3344558899999999999886554 889999999999999999999987321 1 1113333 34444
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEec
Q 001023 151 FVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTI 230 (1185)
Q Consensus 151 ~vi~~s~i~~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts 230 (1185)
++++++++.++.++++.++.++..++.+++|+|||++++|++++|+|||||.|++||.||||++|++++ .+.||||
T Consensus 140 ~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES 215 (941)
T TIGR01517 140 LVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDES 215 (941)
T ss_pred HHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEec
Confidence 555666666666666666666556678999999999999999999999999999999999999999953 3999999
Q ss_pred cCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEE
Q 001023 231 NLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVY 310 (1185)
Q Consensus 231 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~ 310 (1185)
+|||||.|+.|.+++.. ..|+||.+.+|. +.|+|++
T Consensus 216 ~LTGES~pv~K~~~~~n-----------------------~v~~GT~v~~G~---------------------~~~iV~~ 251 (941)
T TIGR01517 216 SITGESDPIKKGAPKDS-----------------------FLLSGTVVNEGS---------------------GRMLVTA 251 (941)
T ss_pred ccCCCCCcccccCCCCc-----------------------eEEeCCeEEeeE---------------------EEEEEEE
Confidence 99999999999765321 125555555554 9999999
Q ss_pred ecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCC
Q 001023 311 AGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387 (1185)
Q Consensus 311 tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~ 387 (1185)
||.+| |++.+...++ ++++++++++++...+..+.++++++.++++.+...... .|. + .
T Consensus 252 tG~~T~~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~------~~~---~--------~ 313 (941)
T TIGR01517 252 VGVNSFGGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRI------IRG---D--------G 313 (941)
T ss_pred eCCCcHHHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh------ccc---c--------c
Confidence 99999 5555555544 467999999999999988877777776665432110000 000 0 0
Q ss_pred cccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcC
Q 001023 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDK 467 (1185)
Q Consensus 388 ~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDK 467 (1185)
+++......+...+..++.+++.+|||+|++++++........+ +++++++|+++.+|+||+||+|||||
T Consensus 314 ~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~l~a~E~lg~v~~Ic~DK 383 (941)
T TIGR01517 314 RDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM----------MKDNNLVRHLAACETMGSATAICSDK 383 (941)
T ss_pred cccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH----------HhCCCEEechHHhhhccCceEEEEcC
Confidence 00000122345578889999999999999999999887777555 78999999999999999999999999
Q ss_pred CCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHH
Q 001023 468 TGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALA 547 (1185)
Q Consensus 468 TGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la 547 (1185)
|||||+|+|++.+++..+..|... ++.. ...+...+++...+
T Consensus 384 TGTLT~n~m~v~~~~~~~~~~~~~------------------------------~~~~--------~~~~~~~~~l~~~~ 425 (941)
T TIGR01517 384 TGTLTQNVMSVVQGYIGEQRFNVR------------------------------DVLR--------NVPKHVRNILVEGI 425 (941)
T ss_pred cCceeeceEEEEEEEEecceEecC------------------------------cccc--------cCCHHHHHHHHHHH
Confidence 999999999999998766444311 0000 00123445566666
Q ss_pred hhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEE
Q 001023 548 ACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSV 627 (1185)
Q Consensus 548 ~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsv 627 (1185)
.||+..+. ..++.+ ..+..++|+|.|+++++++.|..... .+. .|++++.+||+|+||||++
T Consensus 426 ~~~s~~~~----~~~~~~-~~~~~g~p~e~All~~~~~~~~~~~~------------~~~-~~~~~~~~pF~s~~k~msv 487 (941)
T TIGR01517 426 SLNSSSEE----VVDRGG-KRAFIGSKTECALLGFLLLLGRDYQE------------VRA-EEKVVKIYPFNSERKFMSV 487 (941)
T ss_pred HhCCCCcc----ccCCCC-ccccCCCccHHHHHHHHHHcCCCHHH------------HHh-hchhccccccCCCCCeEEE
Confidence 67666551 111111 12456899999999999887743210 112 6778889999999999999
Q ss_pred EEecCCCcEEEEEcCchhHHHHHHHhhc---ch-----hhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001023 628 ILGLPDKTVTLFVKGADTSMFSVIAKAL---NM-----NVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699 (1185)
Q Consensus 628 iv~~~~~~~~l~~KGa~~~i~~~~~~~~---~~-----~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~ 699 (1185)
+++.+++++++++|||||.|+++|+... +. +.++.+.+.+++|+++|+||+++|||.++.+++..|
T Consensus 488 v~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~------ 561 (941)
T TIGR01517 488 VVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRK------ 561 (941)
T ss_pred EEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccc------
Confidence 9998888899999999999999997521 11 135678889999999999999999999976543321
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceE
Q 001023 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779 (1185)
Q Consensus 700 a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~ 779 (1185)
+..|+||+|+|+++++|++|++++++|+.|++||||+||+|||+++||.+||++|||.+++.
T Consensus 562 ----------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~-- 623 (941)
T TIGR01517 562 ----------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG-- 623 (941)
T ss_pred ----------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--
Confidence 23478999999999999999999999999999999999999999999999999999986431
Q ss_pred EEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE
Q 001023 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 859 (1185)
Q Consensus 780 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~ 859 (1185)
.+++|+++..+.++++.+ +...+. |||
T Consensus 624 -----------------------------------------------~vi~G~~~~~l~~~el~~----~i~~~~--Vfa 650 (941)
T TIGR01517 624 -----------------------------------------------LAMEGKEFRRLVYEEMDP----ILPKLR--VLA 650 (941)
T ss_pred -----------------------------------------------eEeeHHHhhhCCHHHHHH----HhccCe--EEE
Confidence 378888888766655444 333443 999
Q ss_pred ecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe--cCcchhHHhhcCceeecc--hhhHHHHHHHHhhH
Q 001023 860 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHW 935 (1185)
Q Consensus 860 r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr~ 935 (1185)
|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|+|. |+++||+++.+ |+.+..+ +.|||+
T Consensus 651 r~sPe~K~~iV~~lq~-~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv--Ak~aADivL~dd~f~~I~~~-i~~gR~ 726 (941)
T TIGR01517 651 RSSPLDKQLLVLMLKD-MGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV--AKEASDIILLDDNFASIVRA-VKWGRN 726 (941)
T ss_pred ECCHHHHHHHHHHHHH-CCCEEEEECCCCchHHHHHhCCcceecCCCccHH--HHHhCCEEEecCCHHHHHHH-HHHHHH
Confidence 9999999999999999 899999999999999999999999988 57787 99999999996 5558888 799999
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccc
Q 001023 936 NYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAG 1015 (1185)
Q Consensus 936 ~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~ 1015 (1185)
+|+|+++++.|.+++|+..+++.+++.++. +++++++++++|+|++++++|+++++. |++.+.++++|+. .
T Consensus 727 ~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~---~~~pl~~~qil~inl~~d~~~al~l~~---e~~~~~lm~~~P~---~ 797 (941)
T TIGR01517 727 VYDNIRKFLQFQLTVNVVAVILTFVGSCIS---STSPLTAVQLLWVNLIMDTLAALALAT---EPPTEALLDRKPI---G 797 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHHhhHHHHcc---CCccHHHHhCCCC---C
Confidence 999999999999999999999988888776 356899999999999999999999985 4566677776663 4
Q ss_pred cCCcccchhHHHHHHHhHHHHHhhheeecccc-----ccCC---c-ccchhhhHHHHHHHHHHHHHHHHHhhcc------
Q 001023 1016 HRQECYNTKLFWLTMADTLWQSVVIFFIPFGA-----YWDS---T-IDVSSIGDLWTLAVVILVNIHLAMDVIR------ 1080 (1185)
Q Consensus 1016 ~~~~~~~~~~~~~~~~~~~~~~~vif~~~~~~-----~~g~---~-~~~~~~~~~~~~~~v~~~~~~~~l~~~~------ 1080 (1185)
+...++++..+..+++.|++++++.|++++.. ..+. . .......++.|.++++...+..+. +++
T Consensus 798 ~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~-~r~~~~~~~ 876 (941)
T TIGR01517 798 RNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEIN-ARKLYERNV 876 (941)
T ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHH-HccCCcccc
Confidence 56678999888899999999998877653221 1111 0 012234567777777765555432 222
Q ss_pred c-hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001023 1081 W-TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFL 1145 (1185)
Q Consensus 1081 ~-~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~ 1145 (1185)
| .++.+.++|..+++.+++++++.. .++. .|.....++..|+.++++.++.++..++.|++
T Consensus 877 ~~~~~~n~~~~~~~~~~~~l~~~~~~--~~~~--~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 877 FEGLFKNRIFVTIMGFTFGFQVIIVE--FGGS--FFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHH--HHHH--HhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 223456666666665555544432 2222 35555668899999888888878877777765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-105 Score=926.48 Aligned_cols=841 Identities=21% Similarity=0.262 Sum_probs=651.2
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccccc---Cccch----hhhHHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF---GRGVS----ILPLAFVLSVTAI 158 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~---~~~~~----~~~l~~vi~~s~i 158 (1185)
.+.|++-||+|.++..+...|+ .++||-|+.+.-+.++++|++++...+... ..|+. ++.+++|++++++
T Consensus 125 l~~Rr~~fG~N~~p~k~~K~Fl---~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~ 201 (1034)
T KOG0204|consen 125 LERRRKIFGSNTYPEKPPKGFL---RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAV 201 (1034)
T ss_pred HHHHHHhcCCCCCCCCCCccHH---HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeec
Confidence 3447889999999999987765 789999999999999999999986443211 12333 3334456667777
Q ss_pred HHHHHHHHHhhhhHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCc
Q 001023 159 KDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNL 238 (1185)
Q Consensus 159 ~~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~ 238 (1185)
.++-++.+-++.+++..+.++.|+|||+.++++..||+||||+.|+.||.+|||++++++++ +.||||+|||||++
T Consensus 202 nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~ 277 (1034)
T KOG0204|consen 202 NDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDH 277 (1034)
T ss_pred chhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcc
Confidence 77777776666677788999999999999999999999999999999999999999999877 99999999999999
Q ss_pred eeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccc---
Q 001023 239 KTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET--- 315 (1185)
Q Consensus 239 ~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~T--- 315 (1185)
+.|.+. .+++.++||.+++|. +.++|+.+|.+|
T Consensus 278 v~k~~~-----------------------~dPfLlSGTkv~eGs---------------------gkMlVTaVGmnt~wG 313 (1034)
T KOG0204|consen 278 VQKSLD-----------------------KDPFLLSGTKVMEGS---------------------GKMLVTAVGMNTQWG 313 (1034)
T ss_pred eeccCC-----------------------CCCeEeecceeecCc---------------------ceEEEEEeeecchHh
Confidence 999653 344778888888887 999999999999
Q ss_pred hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--cCCcccccccccccCCCCCCCCCCcccccc
Q 001023 316 KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKR--HNDELDYMPYYRRKDFSEEGEPDNYKYYGW 393 (1185)
Q Consensus 316 ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~--~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~ 393 (1185)
++|.........+||+|-++++++..+..+.+++|++..++.....-. ...++ ...|- .....
T Consensus 314 ~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~-~~~~~--------------~~~~~ 378 (1034)
T KOG0204|consen 314 IIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEG-GTGTT--------------WSDEY 378 (1034)
T ss_pred hHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCC-CCCcc--------------ccHHH
Confidence 456666677778999999999999999888888888877765543211 11100 00010 01112
Q ss_pred hhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCcccc
Q 001023 394 GLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTE 473 (1185)
Q Consensus 394 ~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~ 473 (1185)
...++..|..++.++++++|++||+++.+........| -+.+.++|.++++|++|...+||+|||||||.
T Consensus 379 ~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkM----------mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~ 448 (1034)
T KOG0204|consen 379 IQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKM----------MKDNNLVRHLDACETMGSATAICSDKTGTLTT 448 (1034)
T ss_pred HHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHH----------hcchhHHHHhHHHhhcCCceEEEecCcCceEe
Confidence 44566677788899999999999999999876666555 45567899999999999999999999999999
Q ss_pred ceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccc
Q 001023 474 NKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIV 553 (1185)
Q Consensus 474 n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~ 553 (1185)
|+|++.+.++++..|..+... . -..++.+.+ .++.+++...+-.
T Consensus 449 N~MtVV~~~~~~~~~k~~~~~-~--------------------~~l~~~~~~---------------ll~~gI~~Nt~g~ 492 (1034)
T KOG0204|consen 449 NRMTVVQSYIGSEHYKVNSPK-S--------------------SNLPPSLLD---------------LLLQGIAQNTTGS 492 (1034)
T ss_pred eeEEEEeeeeccccccccCcc-c--------------------ccCCHHHHH---------------HHHHHHhhcCCCe
Confidence 999999999998887632110 0 000233332 3444444432222
Q ss_pred cccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCC
Q 001023 554 PLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPD 633 (1185)
Q Consensus 554 ~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~ 633 (1185)
. -.++..+.-.-+.+||.|.||+.++..+|..+.. .+. +.++.+++||+|+||||+|+++.++
T Consensus 493 v----~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~------------~R~-e~~v~kv~~FNS~kK~~gvvi~~~~ 555 (1034)
T KOG0204|consen 493 V----VKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQD------------VRP-EEKVVKVYPFNSVKKRMGVVIKLPD 555 (1034)
T ss_pred E----EecCCCCcCccccCCHHHHHHHHHHHHhCcchHh------------hcc-hhheeEEeccCcccceeeEEEEcCC
Confidence 2 1112222122345799999999999999987664 223 7789999999999999999999988
Q ss_pred CcEEEEEcCchhHHHHHHHhhc---------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHH--HHHHHHHHHHHHHh
Q 001023 634 KTVTLFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS--EFEQWQSSFEAASN 702 (1185)
Q Consensus 634 ~~~~l~~KGa~~~i~~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~--e~~~~~~~~~~a~~ 702 (1185)
+..++|+|||.|.++..|.... +++....++..++.||++||||+|+|||+.... +-.+|..
T Consensus 556 ~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~------- 628 (1034)
T KOG0204|consen 556 GGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN------- 628 (1034)
T ss_pred CCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------
Confidence 7734999999999999998753 345566889999999999999999999995433 1112211
Q ss_pred hhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEE
Q 001023 703 ALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVII 782 (1185)
Q Consensus 703 ~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i 782 (1185)
.+..+.+|+++|++||+||.|||||++|+.|++|||+|.|+||||..||.+||.+|||++++..
T Consensus 629 ------------~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d---- 692 (1034)
T KOG0204|consen 629 ------------EELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD---- 692 (1034)
T ss_pred ------------cccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc----
Confidence 1356789999999999999999999999999999999999999999999999999999987632
Q ss_pred eCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecC
Q 001023 783 NSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA 862 (1185)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~s 862 (1185)
-+++.|+++..+.+.++.+...++. |.+|.|
T Consensus 693 -------------------------------------------~~~lEG~eFr~~s~ee~~~i~pkl~------VlARSS 723 (1034)
T KOG0204|consen 693 -------------------------------------------FLALEGKEFRELSQEERDKIWPKLR------VLARSS 723 (1034)
T ss_pred -------------------------------------------cceecchhhhhcCHHHHHhhhhhhe------eeecCC
Confidence 3578899998877777777766665 999999
Q ss_pred cccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeE--EecCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHH
Q 001023 863 PLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQ 938 (1185)
Q Consensus 863 P~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI--gisg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ 938 (1185)
|.+|..+|+.+++ .|++|+++|||+||+|||++||||. ||+|+|. |+++||++|+|++| +++. +.+||..|.
T Consensus 724 P~DK~lLVk~L~~-~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeV--AKEaSDIIi~DDNFssIVk~-v~WGR~VY~ 799 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIK-QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEV--AKEASDIIILDDNFSSIVKA-VKWGRNVYD 799 (1034)
T ss_pred CchHHHHHHHHHh-cCcEEEEecCCCCCchhhhhcccchhccccchhh--hhhhCCeEEEcCchHHHHHH-HHhhhHHHH
Confidence 9999999999998 9999999999999999999999999 5589998 99999999999888 6666 899999999
Q ss_pred HhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCC
Q 001023 939 RMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQ 1018 (1185)
Q Consensus 939 ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~ 1018 (1185)
+|+++++|.+.-|++...+.|..+..+ +.+|++..||+|.|++++.|.+++++.. ++.++.+.+.|. |++.
T Consensus 800 nIqKFiQFQLTVNVvAliv~fv~A~~~---~dsPLtAVQlLWVNLIMDTLgALALATe--pPt~~Lm~RkP~----GR~~ 870 (1034)
T KOG0204|consen 800 NIQKFLQFQLTVNVVALIVNFVSACAT---GDSPLTAVQLLWVNLIMDTLGALALATE--PPTDELMKRKPV----GRTK 870 (1034)
T ss_pred HHHHhheeEEEEEEEeehhhhhhhhhc---CCccHHHHHHHHHHHHHHHHHHHHhccC--CCChHHhcCCCC----CCCC
Confidence 999999999999999988888887765 6689999999999999999999999973 344554445565 9999
Q ss_pred cccchhHHHHHHHhHHHHHhhheeecc-----ccccCCccc-chhhhHHHHHHHHHHHHHHHHHhhcc---chhH----h
Q 001023 1019 ECYNTKLFWLTMADTLWQSVVIFFIPF-----GAYWDSTID-VSSIGDLWTLAVVILVNIHLAMDVIR---WTWI----T 1085 (1185)
Q Consensus 1019 ~~~~~~~~~~~~~~~~~~~~vif~~~~-----~~~~g~~~~-~~~~~~~~~~~~v~~~~~~~~l~~~~---~~~~----~ 1085 (1185)
.+++..++-.++.+++||.+++|.+.+ |..++...+ .....|++|.++|++.-+.-+ ..+. .+.+ .
T Consensus 871 ~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEi-naRki~~~NvFkgi~~ 949 (1034)
T KOG0204|consen 871 PLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEI-NARKIDERNVFKGIFR 949 (1034)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHH-hhcchhHHhHHHHHhc
Confidence 999999999999999999999998732 333444432 334568889998887555433 2222 1111 1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001023 1086 HAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFL 1145 (1185)
Q Consensus 1086 ~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~ 1145 (1185)
+..+...++..++++.++..+ .+- .|.....++..|+.++++.++.++.-.+.|.+
T Consensus 950 N~~F~~ii~~T~v~QviIveF---~g~-~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 950 NRLFCVIITITVVSQVIIVEF---GGA-FFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred CceEEEEeeeeeehhhhhhhh---cCc-ceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 112222222333333333222 111 24556678999999998888888888777754
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-100 Score=973.05 Aligned_cols=824 Identities=18% Similarity=0.221 Sum_probs=633.1
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHh-hHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQF-HRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf-~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed 164 (1185)
..+|+++||+|+++.++.+.++ +.+++|| .++.+++++++++++++ .+.|...+.++++++++.+..++++
T Consensus 30 v~~r~~~~G~N~i~~~~~~s~~---~~~l~~~~~~~~~~~L~~aa~ls~~-----~g~~~~~~~i~~~i~~~~~i~~~qe 101 (884)
T TIGR01522 30 ASHRRAFHGWNEFDVEEDESLW---KKFLSQFVKNPLILLLIASAVISVF-----MGNIDDAVSITLAILIVVTVGFVQE 101 (884)
T ss_pred HHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhChHHHHHHHHHHHHHH-----HcchhhHHHHHhHHHHHHHHHHHHH
Confidence 3457899999999988765543 8899999 89999999999999987 3666777777777788888899999
Q ss_pred HHHhhhhHHhh---cceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceee
Q 001023 165 YRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1185)
Q Consensus 165 ~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K 241 (1185)
++.+++.+++. +.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ +.||||+|||||.|+.|
T Consensus 102 ~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K 177 (884)
T TIGR01522 102 YRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSK 177 (884)
T ss_pred HHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceec
Confidence 99988866554 678999999999999999999999999999999999999999654 89999999999999999
Q ss_pred cccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchh---h
Q 001023 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV---M 318 (1185)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki---~ 318 (1185)
.+++... . ........+|+++.||.+.+ |.+.++|++||.+|.+ .
T Consensus 178 ~~~~~~~----------------~---------------~~~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~T~~gki~ 225 (884)
T TIGR01522 178 VTAPIPA----------------A---------------TNGDLAERSNIAFMGTLVRC-GHGKGIVVGTGSNTEFGAVF 225 (884)
T ss_pred ccccccc----------------c---------------ccccccccCceEEeCCEEEe-eeEEEEEEEecCccHHHHHH
Confidence 8865320 0 00011223455555555544 5599999999999954 4
Q ss_pred hccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHH
Q 001023 319 LNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEIL 398 (1185)
Q Consensus 319 ~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~ 398 (1185)
.........++++++.++++..++.++.++++++.+++..+ . .. . +.
T Consensus 226 ~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~-~-~~-------~------------------------~~ 272 (884)
T TIGR01522 226 KMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWF-Q-GK-------D------------------------WL 272 (884)
T ss_pred HHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-cC-------C------------------------HH
Confidence 44455566689999999999998877665555444333211 1 00 1 23
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEE
Q 001023 399 FTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 478 (1185)
Q Consensus 399 ~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~ 478 (1185)
..+..++.+++.+|||+||++++++.......+ +++++++|+++.+|+||++|+||||||||||+|+|++
T Consensus 273 ~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~----------ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v 342 (884)
T TIGR01522 273 EMFTISVSLAVAAIPEGLPIIVTVTLALGVLRM----------SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTV 342 (884)
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------hhcCCcccchHHHHhccCccEEEecCccccccCeEEE
Confidence 367788899999999999999999888877665 8899999999999999999999999999999999999
Q ss_pred EEEEEeceecCC-CCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccc
Q 001023 479 RCASIWGIDYSG-GNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVV 557 (1185)
Q Consensus 479 ~~~~i~g~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~ 557 (1185)
.+++..+..+.. .....+ + +.+... .+.......+....+++.+.++||+...
T Consensus 343 ~~i~~~~~~~~~~~~~~~~----------------~------~~~~~~-~~~~~~~~~~~~~~~~l~~~~l~~~~~~--- 396 (884)
T TIGR01522 343 TKIWTSDGLHTMLNAVSLN----------------Q------FGEVIV-DGDVLHGFYTVAVSRILEAGNLCNNAKF--- 396 (884)
T ss_pred EEEEecCceEeeccCCccC----------------C------CCcccc-cccccccccCHHHHHHHHHHhhhCCCee---
Confidence 999876533210 000000 0 000000 0000011123345678888999999865
Q ss_pred cCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecC-CCcE
Q 001023 558 DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLP-DKTV 636 (1185)
Q Consensus 558 ~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~-~~~~ 636 (1185)
+.++ + ...++|.|.|+++++++.|+... .. .|+.++.+||+|.||||+++++.+ ++++
T Consensus 397 -~~~~--~---~~~g~p~e~All~~~~~~~~~~~--------------~~-~~~~~~~~pF~s~~k~m~v~~~~~~~~~~ 455 (884)
T TIGR01522 397 -RNEA--D---TLLGNPTDVALIELLMKFGLDDL--------------RE-TYIRVAEVPFSSERKWMAVKCVHRQDRSE 455 (884)
T ss_pred -cCCC--C---CcCCChHHHHHHHHHHHcCcHhH--------------Hh-hCcEEeEeCCCCCCCeEEEEEEEcCCCeE
Confidence 2111 1 12368999999999998776311 12 678889999999999999999864 5788
Q ss_pred EEEEcCchhHHHHHHHhhc---------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhH
Q 001023 637 TLFVKGADTSMFSVIAKAL---------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGR 707 (1185)
Q Consensus 637 ~l~~KGa~~~i~~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r 707 (1185)
++++|||||.|+.+|.... +++.++.+.+++++++++|+|++++|||.+
T Consensus 456 ~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~---------------------- 513 (884)
T TIGR01522 456 MCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE---------------------- 513 (884)
T ss_pred EEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC----------------------
Confidence 9999999999999997531 233456778889999999999999999865
Q ss_pred HHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCH
Q 001023 708 AALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSK 787 (1185)
Q Consensus 708 ~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~ 787 (1185)
+++|+|+|+++++|++|+|++++|+.|+++||+++|+|||+.+||.+||++|||.....
T Consensus 514 -----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~---------- 572 (884)
T TIGR01522 514 -----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTS---------- 572 (884)
T ss_pred -----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCC----------
Confidence 34899999999999999999999999999999999999999999999999999975431
Q ss_pred HHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHH
Q 001023 788 ESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKA 867 (1185)
Q Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa 867 (1185)
-+++|++++...++++++. ...+. ||||++|+||.
T Consensus 573 ---------------------------------------~~v~g~~l~~~~~~~l~~~----~~~~~--Vfar~~P~~K~ 607 (884)
T TIGR01522 573 ---------------------------------------QSVSGEKLDAMDDQQLSQI----VPKVA--VFARASPEHKM 607 (884)
T ss_pred ---------------------------------------ceeEhHHhHhCCHHHHHHH----hhcCe--EEEECCHHHHH
Confidence 1467777776555454443 33343 99999999999
Q ss_pred HHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec--CcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhh
Q 001023 868 GIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYM 943 (1185)
Q Consensus 868 ~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~ 943 (1185)
.+|+.+|+ .|++|+|+|||+||++||++|||||+++ |++. |+++||+++.++++ +..+ +.+||.+|+|++++
T Consensus 608 ~iv~~lq~-~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v--a~~aaDivl~dd~~~~i~~~-i~~gR~~~~ni~k~ 683 (884)
T TIGR01522 608 KIVKALQK-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV--AKEAADMILTDDDFATILSA-IEEGKGIFNNIKNF 683 (884)
T ss_pred HHHHHHHH-CCCEEEEECCCcccHHHHHhCCeeEecCCCcCHH--HHHhcCEEEcCCCHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999999 8999999999999999999999999993 4554 77899999987554 7766 89999999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccch
Q 001023 944 ILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNT 1023 (1185)
Q Consensus 944 i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~ 1023 (1185)
+.|.++.|+...++.+++.++. .+.++++++++|.|++++.+|+++++.. +++++.+.+.|+ .+++.++++
T Consensus 684 i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~~a~~l~~e--~~~~~~m~~~P~----~~~~~~~~~ 754 (884)
T TIGR01522 684 ITFQLSTSVAALSLIALATLMG---FPNPLNAMQILWINILMDGPPAQSLGVE--PVDKDVMRKPPR----PRNDKILTK 754 (884)
T ss_pred HHHHhhhhHHHHHHHHHHHHHc---CCCchhHHHHHHHHHHHHhhHHHHhccC--CCChhHhhCCCC----CCCCCccCH
Confidence 9999999999887777666553 4578999999999999999999999872 344444444455 567889999
Q ss_pred hHHHHHHHhHHHHHhhheeeccccc-cCCcccchhhhHHHHHHHHHHHHHHHHHhhcc--ch-----hHhHHHHHHHHHH
Q 001023 1024 KLFWLTMADTLWQSVVIFFIPFGAY-WDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR--WT-----WITHAVIWGSIIA 1095 (1185)
Q Consensus 1024 ~~~~~~~~~~~~~~~vif~~~~~~~-~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~--~~-----~~~~~~i~~si~~ 1095 (1185)
.++..+++.|++++++.++++.... .|. ......+++|.++++...+.. +.+++ .+ ++.+.++|+.+++
T Consensus 755 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~t~~f~~~v~~q~~~~-~~~r~~~~~~~~~~~~~n~~~~~~~~~ 831 (884)
T TIGR01522 755 DLIKKILVSAIIIVVGTLFVFVREMQDGV--ITARDTTMTFTCFVFFDMFNA-LACRSQTKSVFEIGFFSNRMFNYAVGG 831 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCc--chhhHHHHHHHHHHHHHHHHH-HHHccCCccccccCcccCHHHHHHHHH
Confidence 9999999999998877665533221 111 111234667777666655543 33333 22 2456788888888
Q ss_pred HHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001023 1096 TLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYY 1149 (1185)
Q Consensus 1096 ~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f 1149 (1185)
.++++.+..++|.++. .|.....++..|+.+++..++.++..++.|+++|.+
T Consensus 832 ~~~~~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 832 SIIGQLLVIYFPPLQS--VFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHHHHHH--HHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8788877777776555 355666789999999988888889999999888764
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-99 Score=980.94 Aligned_cols=781 Identities=19% Similarity=0.230 Sum_probs=583.1
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDY 165 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed~ 165 (1185)
...++++||+|.+...+.+++ +.+++||..+++++++++++++++ .++|.+.+.++++++++.+...++++
T Consensus 145 ~~~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~-----~~~~~~~~~i~~i~~~~~~~~~~~~~ 215 (1054)
T TIGR01657 145 IAQRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLL-----DEYYYYSLCIVFMSSTSISLSVYQIR 215 (1054)
T ss_pred HHHHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344788999999999876555 899999999999999999888876 46677788888888888888999988
Q ss_pred HHhhhhHHhh--cceEEEEeCCeEEEEeeeccccccEEEEc--CCCccCCceeEeeccCCCCcEEEEeccCCCCCCceee
Q 001023 166 RRHRSDRIEN--NRLANVLVNNQFQEKKWKDIRVGEIIKIK--TNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1185)
Q Consensus 166 ~r~k~d~~~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~l~--~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K 241 (1185)
+..++.+++. ++.++|+|||+++++++++|+|||||.|+ +|+.+|||++|++ |.|.||||+|||||.|+.|
T Consensus 216 k~~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~-----g~~~VdES~LTGES~Pv~K 290 (1054)
T TIGR01657 216 KQMQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS-----GSCIVNESMLTGESVPVLK 290 (1054)
T ss_pred HHHHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe-----CcEEEecccccCCccceec
Confidence 8877766654 56899999999999999999999999999 9999999999998 5699999999999999999
Q ss_pred cccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeec------CCeEEEEEEEecccc
Q 001023 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN------TSWALGVAVYAGQET 315 (1185)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n------t~~i~gvVv~tG~~T 315 (1185)
.+.+.... .+..+ ...+...+|++++||.+.. .|.+.|+|++||.+|
T Consensus 291 ~~~~~~~~----------------~~~~~-----------~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T 343 (1054)
T TIGR01657 291 FPIPDNGD----------------DDEDL-----------FLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFST 343 (1054)
T ss_pred ccCCcccc----------------ccccc-----------cccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccc
Confidence 88643100 00000 0012335667777777764 467999999999999
Q ss_pred ---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccc
Q 001023 316 ---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYG 392 (1185)
Q Consensus 316 ---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~ 392 (1185)
++.+....++...+++++.+.+++.+++.+.++.+++.++. ++.. .
T Consensus 344 ~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~-~~~~--~---------------------------- 392 (1054)
T TIGR01657 344 SKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE-LIKD--G---------------------------- 392 (1054)
T ss_pred cchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHc--C----------------------------
Confidence 55555555566678899998888777655544333222211 1111 0
Q ss_pred chhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccc
Q 001023 393 WGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLT 472 (1185)
Q Consensus 393 ~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT 472 (1185)
..+...+++++.+++.+||++||++++++...+..++ ++++++||+++.+|.||+||++|||||||||
T Consensus 393 --~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL----------~k~~il~~~~~~ie~lG~v~vicfDKTGTLT 460 (1054)
T TIGR01657 393 --RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARL----------KKKGIFCTSPFRINFAGKIDVCCFDKTGTLT 460 (1054)
T ss_pred --CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH----------HHCCEEEcCcccceecceeeEEEEcCCCCCc
Confidence 0123468889999999999999999999988877666 7889999999999999999999999999999
Q ss_pred cceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhccc
Q 001023 473 ENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTI 552 (1185)
Q Consensus 473 ~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~ 552 (1185)
+|+|+|.++...+..... +... ..........+..++++||++
T Consensus 461 en~m~v~~v~~~~~~~~~-----------------------------~~~~--------~~~~~~~~~~~~~~~a~C~~~ 503 (1054)
T TIGR01657 461 EDGLDLRGVQGLSGNQEF-----------------------------LKIV--------TEDSSLKPSITHKALATCHSL 503 (1054)
T ss_pred cCCeeEEeEecccCcccc-----------------------------cccc--------ccccccCchHHHHHHHhCCee
Confidence 999999998754321000 0000 000012233567789999998
Q ss_pred ccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEE-ecCC---e--EEEEecCceeeeEEEEEeecCCCCCceEE
Q 001023 553 VPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIE-RTSG---H--IVIDIQGQRQSRFNVLGLHEFDSDRKRMS 626 (1185)
Q Consensus 553 ~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~-r~~~---~--~~i~~~g~~~~~~~il~~~~F~s~rkrms 626 (1185)
.... + ...++|.|.|+++++ |+.+.. .... . ..+...+... .|++++.+||+|+|||||
T Consensus 504 ~~~~--------~---~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~il~~~pF~S~~krMs 568 (1054)
T TIGR01657 504 TKLE--------G---KLVGDPLDKKMFEAT---GWTLEEDDESAEPTSILAVVRTDDPPQ-ELSIIRRFQFSSALQRMS 568 (1054)
T ss_pred EEEC--------C---EEecCHHHHHHHHhC---CCEEECCCCcccccccccceeccCCCc-eEEEEEEEeecCCCCEEE
Confidence 7611 1 134799999999976 444332 1100 0 0111112234 899999999999999999
Q ss_pred EEEecCC-CcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhh
Q 001023 627 VILGLPD-KTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALF 705 (1185)
Q Consensus 627 viv~~~~-~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~ 705 (1185)
|+++.++ +++++|+|||||.|+++|.+. ..++++.+.+++|+.+|+|||++|||++++.++.++.+ .
T Consensus 569 vvv~~~~~~~~~~~~KGApE~Il~~c~~~---~~p~~~~~~~~~~a~~G~RVLalA~k~l~~~~~~~~~~---------~ 636 (1054)
T TIGR01657 569 VIVSTNDERSPDAFVKGAPETIQSLCSPE---TVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQKAQD---------L 636 (1054)
T ss_pred EEEEEcCCCeEEEEEECCHHHHHHHcCCc---CCChhHHHHHHHHHhcCCEEEEEEEeecCccchhhhhh---------c
Confidence 9999764 578899999999999999854 45778889999999999999999999998543332211 1
Q ss_pred hHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCC
Q 001023 706 GRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN 785 (1185)
Q Consensus 706 ~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~ 785 (1185)
+| +.+|+||+|+|+++++|++|++++++|+.|++|||+|||+|||+..||.+||++|||++++..++..+..
T Consensus 637 ~r--------~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~ 708 (1054)
T TIGR01657 637 SR--------DAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAE 708 (1054)
T ss_pred cH--------HHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecc
Confidence 22 4679999999999999999999999999999999999999999999999999999999877665554432
Q ss_pred CHHHH-HHHHHHHHHhhcccccCCCCCCc---ccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEec
Q 001023 786 SKESC-RKSLEDAIAMSKKLKTVPGVSHN---SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV 861 (1185)
Q Consensus 786 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~ 861 (1185)
+.+.. ...+.+...+............. ...........+.++++|+++..+.+. ..+.+.+++.+++ ||||+
T Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~~~--VfAR~ 785 (1054)
T TIGR01657 709 PPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSHTT--VFARM 785 (1054)
T ss_pred cccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhcCe--EEEec
Confidence 11000 00000000000000000000000 000000113456799999999876432 2345777777777 99999
Q ss_pred CcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHH
Q 001023 862 APLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQR 939 (1185)
Q Consensus 862 sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~r 939 (1185)
+|+||..+|+.+|+ .|++|+|||||+||+||||+|||||++++.| |+.||||++.+.++ +..+ +.+||+++.+
T Consensus 786 sP~qK~~iV~~lq~-~g~~V~m~GDG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~-I~eGR~~l~~ 860 (1054)
T TIGR01657 786 APDQKETLVELLQK-LDYTVGMCGDGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNV-IREGRCALVT 860 (1054)
T ss_pred CHHHHHHHHHHHHh-CCCeEEEEeCChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHH-HHHHHHHHHH
Confidence 99999999999999 8999999999999999999999999998776 66999999986555 6766 7899999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCc
Q 001023 940 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1019 (1185)
Q Consensus 940 i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~ 1019 (1185)
+.+++.|.+..+++..+..++..+. ..+++++|++|.|++++.+|+++++. +.+.+.+++.|+ ...
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~l~~~Q~l~i~li~~~~~~l~l~~---~~p~~~l~~~~P------~~~ 926 (1054)
T TIGR01657 861 SFQMFKYMALYSLIQFYSVSILYLI-----GSNLGDGQFLTIDLLLIFPVALLMSR---NKPLKKLSKERP------PSN 926 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-----cCcCccHHHHHHHHHHHHHHHHHHHc---CCchhhcCCCCC------Ccc
Confidence 9999999988887665544332221 25789999999999999999999986 345666666655 468
Q ss_pred ccchhHHHHHHHhHHHHHhhheeec
Q 001023 1020 CYNTKLFWLTMADTLWQSVVIFFIP 1044 (1185)
Q Consensus 1020 ~~~~~~~~~~~~~~~~~~~vif~~~ 1044 (1185)
++++..+..++.+++++.++.++.+
T Consensus 927 l~~~~~~~si~~q~~i~~~~~~~~~ 951 (1054)
T TIGR01657 927 LFSVYILTSVLIQFVLHILSQVYLV 951 (1054)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988776663
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-98 Score=946.35 Aligned_cols=800 Identities=19% Similarity=0.236 Sum_probs=597.3
Q ss_pred EeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHH
Q 001023 80 YINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159 (1185)
Q Consensus 80 ~~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~ 159 (1185)
.+++.+..+|+++||+|+++..|.+.++ +.+++||.++++++++++++++++ .+.+...+.++++++++.+.
T Consensus 67 GLs~~ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~p~~~lL~~aa~ls~~-----~~~~~~a~~I~~iv~i~~~i 138 (902)
T PRK10517 67 GLNEAEVESAREQHGENELPAQKPLPWW---VHLWVCYRNPFNILLTILGAISYA-----TEDLFAAGVIALMVAISTLL 138 (902)
T ss_pred CCCHHHHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH-----HccHHHHHHHHHHHHHHHHH
Confidence 3444455558899999999999887554 889999999999999999999987 46777888888899999999
Q ss_pred HHHHHHHHhhhhH---HhhcceEEEEeC------CeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEec
Q 001023 160 DAYEDYRRHRSDR---IENNRLANVLVN------NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTI 230 (1185)
Q Consensus 160 ~~~ed~~r~k~d~---~~n~~~~~V~r~------g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts 230 (1185)
++++++|..++.+ +..+.+++|+|| |++++|++++|+|||||.|++||.||||++|+++++ +.||||
T Consensus 139 ~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES 214 (902)
T PRK10517 139 NFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQA 214 (902)
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEec
Confidence 9999999987744 455778999999 789999999999999999999999999999999654 899999
Q ss_pred cCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEE
Q 001023 231 NLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVY 310 (1185)
Q Consensus 231 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~ 310 (1185)
+|||||.|+.|.+++... ....+.+.+|+++.||.+.. |.+.++|+.
T Consensus 215 ~LTGES~PV~K~~~~~~~--------------------------------~~~~~~~~~n~vfaGT~V~~-G~~~~vV~a 261 (902)
T PRK10517 215 SLTGESLPVEKFATTRQP--------------------------------EHSNPLECDTLCFMGTNVVS-GTAQAVVIA 261 (902)
T ss_pred CcCCCCCceecccccccc--------------------------------cccCccccccceeeCceEee-eeEEEEEEE
Confidence 999999999998875320 01112334556666666655 559999999
Q ss_pred ecccchh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCC
Q 001023 311 AGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387 (1185)
Q Consensus 311 tG~~Tki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~ 387 (1185)
||.+|.+ ......+..+++++++.++++..++..+.++++.+.++++.+... +
T Consensus 262 tG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~--------------- 317 (902)
T PRK10517 262 TGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------D--------------- 317 (902)
T ss_pred eccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------C---------------
Confidence 9999954 455556667789999999999998888877777766555432110 1
Q ss_pred cccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcC
Q 001023 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDK 467 (1185)
Q Consensus 388 ~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDK 467 (1185)
+...+..++.+++.+|||+||++++++...++..+ +++++++|+++.+|+||++|+|||||
T Consensus 318 ---------~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m----------ak~~ilVk~l~aiE~lg~v~vic~DK 378 (902)
T PRK10517 318 ---------WWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL----------SKQKVIVKRLDAIQNFGAMDILCTDK 378 (902)
T ss_pred ---------HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH----------HhCCcEEecchhhhhccCCCEEEecC
Confidence 23367788999999999999999998887777665 88999999999999999999999999
Q ss_pred CCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHH
Q 001023 468 TGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALA 547 (1185)
Q Consensus 468 TGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la 547 (1185)
|||||+|+|++.++... .+. + .++++...+
T Consensus 379 TGTLT~n~m~V~~~~~~---~~~-----------------------------~------------------~~~ll~~a~ 408 (902)
T PRK10517 379 TGTLTQDKIVLENHTDI---SGK-----------------------------T------------------SERVLHSAW 408 (902)
T ss_pred CCccccceEEEEEEecC---CCC-----------------------------C------------------HHHHHHHHH
Confidence 99999999999875310 000 0 012334444
Q ss_pred hhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEE
Q 001023 548 ACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSV 627 (1185)
Q Consensus 548 ~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsv 627 (1185)
+|..... ..+||.|.|++.++...+.. .... .|+.+..+||+|+||||++
T Consensus 409 l~~~~~~---------------~~~~p~d~All~~a~~~~~~--------------~~~~-~~~~~~~~pFds~~k~msv 458 (902)
T PRK10517 409 LNSHYQT---------------GLKNLLDTAVLEGVDEESAR--------------SLAS-RWQKIDEIPFDFERRRMSV 458 (902)
T ss_pred hcCCcCC---------------CCCCHHHHHHHHHHHhcchh--------------hhhh-cCceEEEeeeCCCcceEEE
Confidence 4322111 13699999999998653210 0113 6777889999999999999
Q ss_pred EEecCCCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001023 628 ILGLPDKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699 (1185)
Q Consensus 628 iv~~~~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~ 699 (1185)
+++++++...+++|||++.|+++|+... +++..+.+.+..++++++|+|++++|||+++.++. .+
T Consensus 459 vv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~-~~------ 531 (902)
T PRK10517 459 VVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREG-DY------ 531 (902)
T ss_pred EEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCcccc-cc------
Confidence 9998888889999999999999997531 23445677788899999999999999998865321 00
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceE
Q 001023 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779 (1185)
Q Consensus 700 a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~ 779 (1185)
....|+|++|+|+++++|++|++++++|++|+++||+|+|+|||++.||.+||++|||...
T Consensus 532 ---------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---- 592 (902)
T PRK10517 532 ---------------QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG---- 592 (902)
T ss_pred ---------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcc----
Confidence 0123789999999999999999999999999999999999999999999999999999421
Q ss_pred EEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE
Q 001023 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 859 (1185)
Q Consensus 780 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~ 859 (1185)
-+++|.+++.+.++++. ++...++ |||
T Consensus 593 -----------------------------------------------~v~~G~el~~l~~~el~----~~~~~~~--VfA 619 (902)
T PRK10517 593 -----------------------------------------------EVLIGSDIETLSDDELA----NLAERTT--LFA 619 (902)
T ss_pred -----------------------------------------------CceeHHHHHhCCHHHHH----HHHhhCc--EEE
Confidence 15778888766554444 4444555 999
Q ss_pred ecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhHH
Q 001023 860 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWN 936 (1185)
Q Consensus 860 r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~ 936 (1185)
|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +... +.+||..
T Consensus 620 r~sPe~K~~IV~~Lq~-~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~~~~I~~a-i~~gR~i 695 (902)
T PRK10517 620 RLTPMHKERIVTLLKR-EGHVVGFMGDGINDAPALRAADIGISVDGAVDI--AREAADIILLEKSLMVLEEG-VIEGRRT 695 (902)
T ss_pred EcCHHHHHHHHHHHHH-CCCEEEEECCCcchHHHHHhCCEEEEeCCcCHH--HHHhCCEEEecCChHHHHHH-HHHHHHH
Confidence 9999999999999999 899999999999999999999999999 56666 99999999998666 6666 8999999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCccccccc
Q 001023 937 YQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGH 1016 (1185)
Q Consensus 937 ~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~ 1016 (1185)
|+|+++++.|.+..|+..++..++..++.. ..|+.+.+++|.|++++ +|.++++. |+++..+++.|+.+..
T Consensus 696 ~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~---~~pl~~~qiL~inl~~D-~~~~al~~---d~~~~~~m~~p~r~~~-- 766 (902)
T PRK10517 696 FANMLKYIKMTASSNFGNVFSVLVASAFLP---FLPMLPLHLLIQNLLYD-VSQVAIPF---DNVDDEQIQKPQRWNP-- 766 (902)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhh---hhhhHHHHHHHHHHHHH-HhHHhhcC---CCCChhhhcCCCCCCH--
Confidence 999999999999999988887777666532 25899999999999999 79999987 3445556677773211
Q ss_pred CCcccchhHHHH-HHHhHHHHHhhh---eeeccccccCCcc-cchhhhHHHHHHHHHHHHHHHHHh-hccchhHhHHHHH
Q 001023 1017 RQECYNTKLFWL-TMADTLWQSVVI---FFIPFGAYWDSTI-DVSSIGDLWTLAVVILVNIHLAMD-VIRWTWITHAVIW 1090 (1185)
Q Consensus 1017 ~~~~~~~~~~~~-~~~~~~~~~~vi---f~~~~~~~~g~~~-~~~~~~~~~~~~~v~~~~~~~~l~-~~~~~~~~~~~i~ 1090 (1185)
..+.. .+..|++.+++. |++.++..+.... ....+.+.+|+.+++...+.+... +....++.+...|
T Consensus 767 -------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~ 839 (902)
T PRK10517 767 -------ADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAW 839 (902)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHH
Confidence 11222 234444444333 2221111110100 001233445777777766665322 2222344666777
Q ss_pred HHHHHHHHHHHHHhccC--CCchHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001023 1091 GSIIATLICVMIIDAVP--SLPGYWAFFEVAKT--RLFWFCLMIILVAALIPRFLVKFLYQYY 1149 (1185)
Q Consensus 1091 ~si~~~~i~~~i~~~i~--~~~~~~~~~~~~~~--~~~wl~~llv~~~~~l~~~~~k~~~r~f 1149 (1185)
..+++.++..++..++| .++.+ |.....+ ...|+.++.+.++ ++....-+.+.|+|
T Consensus 840 ~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~-~~~e~~K~~~~~~~ 899 (902)
T PRK10517 840 PLMIMTLIVMAVGIALPFSPLASY--LQLQALPLSYFPWLVAILAGYM-TLTQLVKGFYSRRY 899 (902)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHh--hCCcCCChhHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 77777777776666676 44442 3333333 5667666555544 33333333444443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-97 Score=942.34 Aligned_cols=820 Identities=18% Similarity=0.213 Sum_probs=602.7
Q ss_pred EeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc-c-----cCccchhhhHHHHH
Q 001023 80 YINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA-V-----FGRGVSILPLAFVL 153 (1185)
Q Consensus 80 ~~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~-~-----~~~~~~~~~l~~vi 153 (1185)
.+++.+.+.|+++||+|.++..|.+.++ +.+++||.++..+.++++++++++.+.- + .+.|...+.+++++
T Consensus 45 GLs~~ea~~rl~~~G~N~l~~~~~~~~~---~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v 121 (903)
T PRK15122 45 GLTEEDAAERLQRYGPNEVAHEKPPHAL---VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMV 121 (903)
T ss_pred CCCHHHHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHH
Confidence 3444455558999999999988876543 8899999999999999999999874210 0 12466777788889
Q ss_pred HHHHHHHHHHHHHHhhhhH---HhhcceEEEEeC------CeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCc
Q 001023 154 SVTAIKDAYEDYRRHRSDR---IENNRLANVLVN------NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGV 224 (1185)
Q Consensus 154 ~~s~i~~~~ed~~r~k~d~---~~n~~~~~V~r~------g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~ 224 (1185)
+++.+.+++++++..++.+ +..+.+++|+|| |++++|+.++|+|||||.|++||.||||++|+++++
T Consensus 122 ~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~---- 197 (903)
T PRK15122 122 LLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD---- 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----
Confidence 9999999999999987755 444678999998 489999999999999999999999999999999654
Q ss_pred EEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeE
Q 001023 225 AYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWA 304 (1185)
Q Consensus 225 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i 304 (1185)
+.||||+|||||.|+.|.+..... ..+ .+ +.. .+......+..|+++.||.+.+ |.+
T Consensus 198 l~VDES~LTGES~PV~K~~~~~~~-~~~------------~~--------~~~-~~~~~~~~~~~n~vfaGT~V~~-G~~ 254 (903)
T PRK15122 198 LFISQAVLTGEALPVEKYDTLGAV-AGK------------SA--------DAL-ADDEGSLLDLPNICFMGTNVVS-GTA 254 (903)
T ss_pred eEEEccccCCCCcceeeecccccc-ccc------------cc--------ccc-ccccCCcccccceEEeCCEEEe-eeE
Confidence 899999999999999998631100 000 00 000 0000111234566666666665 569
Q ss_pred EEEEEEecccchh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCC
Q 001023 305 LGVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSE 381 (1185)
Q Consensus 305 ~gvVv~tG~~Tki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~ 381 (1185)
.++|++||.+|.+ ...... +..++++++.++++...+..+.++++.+..++..+.. .
T Consensus 255 ~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~---------- 314 (903)
T PRK15122 255 TAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------G---------- 314 (903)
T ss_pred EEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------C----------
Confidence 9999999999954 333333 4456899999999998887776666655544432211 0
Q ss_pred CCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccccccccee
Q 001023 382 EGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIK 461 (1185)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd 461 (1185)
.+...+..++.+++.+|||+||++++++...++..+ +++++++|+.+.+|+||++|
T Consensus 315 --------------~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m----------ak~~ilVk~l~avE~Lg~v~ 370 (903)
T PRK15122 315 --------------DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM----------ARRKVVVKRLNAIQNFGAMD 370 (903)
T ss_pred --------------CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH----------HHcCCeecccchhhhhcCCc
Confidence 123367788999999999999999998887777665 78999999999999999999
Q ss_pred EEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHH
Q 001023 462 YVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYD 541 (1185)
Q Consensus 462 ~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 541 (1185)
+||||||||||+|+|++.+++..+. +. ++ +
T Consensus 371 vIc~DKTGTLT~~~m~V~~~~~~~~-~~------------------------------~~-------------------~ 400 (903)
T PRK15122 371 VLCTDKTGTLTQDRIILEHHLDVSG-RK------------------------------DE-------------------R 400 (903)
T ss_pred EEEecCCcccccCeEEEEEEEcCCC-CC------------------------------hH-------------------H
Confidence 9999999999999999988642110 00 11 2
Q ss_pred HHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCC
Q 001023 542 FFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSD 621 (1185)
Q Consensus 542 ~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~ 621 (1185)
++...++| +... . ..+||.|.|+++++.+.|... ... .|+.+..+||+|.
T Consensus 401 ~l~~a~l~-s~~~----~----------~~~~p~e~All~~a~~~~~~~--------------~~~-~~~~~~~~pF~s~ 450 (903)
T PRK15122 401 VLQLAWLN-SFHQ----S----------GMKNLMDQAVVAFAEGNPEIV--------------KPA-GYRKVDELPFDFV 450 (903)
T ss_pred HHHHHHHh-CCCC----C----------CCCChHHHHHHHHHHHcCchh--------------hhh-cCceEEEeeeCCC
Confidence 23333332 2111 0 136999999999998866421 012 5777888999999
Q ss_pred CceEEEEEecCCCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHH
Q 001023 622 RKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQW 693 (1185)
Q Consensus 622 rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~ 693 (1185)
||+|++++++.+|++++++|||++.|+++|+... +++.++++.+.+++++.+|+|++++|||+++.++..++
T Consensus 451 ~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~ 530 (903)
T PRK15122 451 RRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQ 530 (903)
T ss_pred cCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccc
Confidence 9999999998888899999999999999997531 23345677888899999999999999999865432110
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 694 QSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 694 ~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
..+..|+||+|+|+++++|++|++++++|++|+++||+|+|+|||+..||.+||++|||.
T Consensus 531 --------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~ 590 (903)
T PRK15122 531 --------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE 590 (903)
T ss_pred --------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 012357899999999999999999999999999999999999999999999999999994
Q ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccC
Q 001023 774 TSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC 853 (1185)
Q Consensus 774 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~ 853 (1185)
.. -+++|.+++.+.++++ .++...+
T Consensus 591 ~~---------------------------------------------------~vi~G~el~~~~~~el----~~~v~~~ 615 (903)
T PRK15122 591 PG---------------------------------------------------EPLLGTEIEAMDDAAL----AREVEER 615 (903)
T ss_pred CC---------------------------------------------------CccchHhhhhCCHHHH----HHHhhhC
Confidence 21 1578888887665544 4444555
Q ss_pred CeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHH
Q 001023 854 SVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLL 930 (1185)
Q Consensus 854 ~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll 930 (1185)
+ ||||++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.++++ +..+ +
T Consensus 616 ~--VfAr~sPe~K~~iV~~Lq~-~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdv--AkeaADiVLldd~f~~Iv~a-i 689 (903)
T PRK15122 616 T--VFAKLTPLQKSRVLKALQA-NGHTVGFLGDGINDAPALRDADVGISVDSGADI--AKESADIILLEKSLMVLEEG-V 689 (903)
T ss_pred C--EEEEeCHHHHHHHHHHHHh-CCCEEEEECCCchhHHHHHhCCEEEEeCcccHH--HHHhcCEEEecCChHHHHHH-H
Confidence 5 9999999999999999999 899999999999999999999999999 57777 99999999988666 6666 8
Q ss_pred HHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCc
Q 001023 931 VHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQ 1010 (1185)
Q Consensus 931 ~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ 1010 (1185)
.+||..|+|+++++.|.+..|+..+++.++..++. +..|+.+.+++|.|++++. |.++++. |++.+.+|+.|+
T Consensus 690 ~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~~nli~D~-~~lal~~---d~~~~~~m~~P~ 762 (903)
T PRK15122 690 IKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFI---PFLPMLAIHLLLQNLMYDI-SQLSLPW---DKMDKEFLRKPR 762 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh---ccchhHHHHHHHHHHHHHH-HHHhhcC---CCCCHhhcCCCC
Confidence 99999999999999999999998777766655553 3358999999999999995 9999987 344444557676
Q ss_pred ccccccCCcccchhHHHHHHHhHHHHHhhheeecccccc-CCcccchhhhHHHHHHHHHHHHHHHHHhhccc--hhHhHH
Q 001023 1011 LYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYW-DSTIDVSSIGDLWTLAVVILVNIHLAMDVIRW--TWITHA 1087 (1185)
Q Consensus 1011 ly~~~~~~~~~~~~~~~~~~~~~~~~~~vif~~~~~~~~-g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~ 1087 (1185)
.++..++++..++.. +.+.+.+++.|++.++... |...-...+.+.+|+.+++...+.++ .+++. .++.+.
T Consensus 763 ----~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~~-~~R~~~~~~~~~~ 836 (903)
T PRK15122 763 ----KWDAKNIGRFMLWIG-PTSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVVH-MLRTQKIPFIQST 836 (903)
T ss_pred ----CCChhhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHHH-hhCcCCCCcCcch
Confidence 566677776444322 2222333333333211111 21000012345668887777666643 33332 233444
Q ss_pred HHHHHHHHHHHHHHHHhccCC--CchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHH-HHHHhh
Q 001023 1088 VIWGSIIATLICVMIIDAVPS--LPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVK-FLYQYY 1149 (1185)
Q Consensus 1088 ~i~~si~~~~i~~~i~~~i~~--~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k-~~~r~f 1149 (1185)
..+..+++.+++.++..++|. ++. .|.....++.+|+.++.+.++.++...+.| .+.|+|
T Consensus 837 ~~~~~~~~~~~~~~~~~~~p~~~~~~--~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 837 AALPVLLTTGLIMAIGIYIPFSPLGA--MVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHH--HhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 555555555555555556664 333 455666678889988877777777777777 444443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-96 Score=935.44 Aligned_cols=797 Identities=19% Similarity=0.228 Sum_probs=590.7
Q ss_pred EeCCCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHH
Q 001023 80 YINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIK 159 (1185)
Q Consensus 80 ~~n~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~ 159 (1185)
.+++.+..+|+++||+|.++..+.+.++ +.+++||..+++++++++++++++ .+.+...+.++++++++.+.
T Consensus 33 GLs~~ev~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~p~~~iL~~~a~ls~~-----~~~~~~~~iI~~iv~~~~~i 104 (867)
T TIGR01524 33 GLTNVEVTERLAEFGPNQTVEEKKVPNL---RLLIRAFNNPFIYILAMLMGVSYL-----TDDLEATVIIALMVLASGLL 104 (867)
T ss_pred CCCHHHHHHHHHhcCCCcCCCCCCCCHH---HHHHHHHhhHHHHHHHHHHHHHHH-----HhhHHHHHHhhhHHHHHHHH
Confidence 3444445558899999999998876443 889999999999999999999987 46777788888899999999
Q ss_pred HHHHHHHHhhhhH---HhhcceEEEEe------CCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEec
Q 001023 160 DAYEDYRRHRSDR---IENNRLANVLV------NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTI 230 (1185)
Q Consensus 160 ~~~ed~~r~k~d~---~~n~~~~~V~r------~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts 230 (1185)
..++++|..++.. +..+.+++|+| ||++++|+.++|+|||||.|++||.||||++|+++++ +.||||
T Consensus 105 ~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES 180 (867)
T TIGR01524 105 GFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQS 180 (867)
T ss_pred HHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcc
Confidence 9999998877644 45568899999 9999999999999999999999999999999999654 899999
Q ss_pred cCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEE
Q 001023 231 NLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVY 310 (1185)
Q Consensus 231 ~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~ 310 (1185)
.|||||.|+.|.+++... ......+.+|+++.||.+.+ |.+.++|++
T Consensus 181 ~LTGES~PV~K~~~~~~~--------------------------------~~~~~~~~~n~vfaGT~v~~-G~~~~~V~~ 227 (867)
T TIGR01524 181 ALTGESLPVEKFVEDKRA--------------------------------RDPEILERENLCFMGTNVLS-GHAQAVVLA 227 (867)
T ss_pred cccCCCCcccccCCcccc--------------------------------ccccccccccceecCCeEEE-eEEEEEEEE
Confidence 999999999998875320 00011223455555555554 459999999
Q ss_pred ecccchh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCC
Q 001023 311 AGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDN 387 (1185)
Q Consensus 311 tG~~Tki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~ 387 (1185)
||.+|.+ ...... +.+++++++.++++..++..+.++++++.++++.+... +
T Consensus 228 tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~--------------- 282 (867)
T TIGR01524 228 TGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------D--------------- 282 (867)
T ss_pred EcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------C---------------
Confidence 9999954 444445 55678999999999999988888777776555432110 1
Q ss_pred cccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcC
Q 001023 388 YKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDK 467 (1185)
Q Consensus 388 ~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDK 467 (1185)
+...+..++.+++.+|||+||++++++....+..+ +++++++|+++.+|+||++|+|||||
T Consensus 283 ---------~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m----------ak~~ilvk~l~aiE~lg~v~vic~DK 343 (867)
T TIGR01524 283 ---------WLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM----------SKKKVIVKELSAIQNFGAMDILCTDK 343 (867)
T ss_pred ---------HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH----------HhCCcEEccchhhhhccCccEEEecC
Confidence 22367788999999999999999998887777665 88999999999999999999999999
Q ss_pred CCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHH
Q 001023 468 TGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALA 547 (1185)
Q Consensus 468 TGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la 547 (1185)
|||||+|+|++.++... . .. ..++++...+
T Consensus 344 TGTLT~~~m~v~~~~~~----~------------------------------~~----------------~~~~~l~~a~ 373 (867)
T TIGR01524 344 TGTLTQDKIELEKHIDS----S------------------------------GE----------------TSERVLKMAW 373 (867)
T ss_pred CCccccCeEEEEEEecC----C------------------------------CC----------------CHHHHHHHHH
Confidence 99999999999886310 0 00 0112333333
Q ss_pred hhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEE
Q 001023 548 ACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSV 627 (1185)
Q Consensus 548 ~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsv 627 (1185)
+|..... ..+||.|.|+++++.+.... .... .|+.+..+||+|+||||++
T Consensus 374 l~~~~~~---------------~~~~p~~~Al~~~~~~~~~~--------------~~~~-~~~~~~~~pF~s~~k~ms~ 423 (867)
T TIGR01524 374 LNSYFQT---------------GWKNVLDHAVLAKLDESAAR--------------QTAS-RWKKVDEIPFDFDRRRLSV 423 (867)
T ss_pred HhCCCCC---------------CCCChHHHHHHHHHHhhchh--------------hHhh-cCceEEEeccCCCcCEEEE
Confidence 3322111 13599999999998753211 0112 6777888999999999999
Q ss_pred EEecCCCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001023 628 ILGLPDKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699 (1185)
Q Consensus 628 iv~~~~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~ 699 (1185)
+++++++...+++|||++.|+++|+... +++.++.+.+.+++++.+|+|++++|||+++.++.. +
T Consensus 424 ~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~-~------ 496 (867)
T TIGR01524 424 VVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEAD-F------ 496 (867)
T ss_pred EEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCccccc-c------
Confidence 9998777789999999999999997531 233456788889999999999999999998754310 0
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceE
Q 001023 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779 (1185)
Q Consensus 700 a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~ 779 (1185)
.+..|+||+|+|+++++|++|++++++|++|+++||+|+|+|||+..||.+||+++||.+++
T Consensus 497 ---------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~~--- 558 (867)
T TIGR01524 497 ---------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND--- 558 (867)
T ss_pred ---------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC---
Confidence 01237899999999999999999999999999999999999999999999999999995321
Q ss_pred EEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE
Q 001023 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 859 (1185)
Q Consensus 780 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~ 859 (1185)
+++|.+++...++++ .++...++ |||
T Consensus 559 ------------------------------------------------v~~g~~l~~~~~~el----~~~~~~~~--vfA 584 (867)
T TIGR01524 559 ------------------------------------------------FLLGADIEELSDEEL----ARELRKYH--IFA 584 (867)
T ss_pred ------------------------------------------------eeecHhhhhCCHHHH----HHHhhhCe--EEE
Confidence 566777765544443 34444555 999
Q ss_pred ecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhHH
Q 001023 860 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWN 936 (1185)
Q Consensus 860 r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~ 936 (1185)
|++|+||.++|+.+|+ .|++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +... +.+||..
T Consensus 585 r~~Pe~K~~iV~~lq~-~G~vVam~GDGvNDapALk~AdVGIAmg~gtdv--Ak~aADiVLldd~~~~I~~a-i~~gR~i 660 (867)
T TIGR01524 585 RLTPMQKSRIIGLLKK-AGHTVGFLGDGINDAPALRKADVGISVDTAADI--AKEASDIILLEKSLMVLEEG-VIEGRNT 660 (867)
T ss_pred ECCHHHHHHHHHHHHh-CCCEEEEECCCcccHHHHHhCCEEEEeCCccHH--HHHhCCEEEecCChHHHHHH-HHHHHHH
Confidence 9999999999999999 899999999999999999999999999 46666 99999999998666 6666 8999999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCccccccc
Q 001023 937 YQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGH 1016 (1185)
Q Consensus 937 ~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~ 1016 (1185)
|+|+++++.|.+..|+..++..++..++. ...|+.+.+++|.|++++ +|+++++. |++...+|+.|+-.
T Consensus 661 ~~ni~k~i~~~ls~n~~~~~~~~~~~~~~---~~~pl~~~qil~inl~~d-~~~~al~~---~~~~~~~m~~p~~~---- 729 (867)
T TIGR01524 661 FGNILKYLKMTASSNFGNVFSVLVASAFI---PFLPMLSLHLLIQNLLYD-FSQLTLPW---DKMDREFLKKPHQW---- 729 (867)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHH-HHHHhhcC---CCCChHhhCCCCCC----
Confidence 99999999999999998877766665553 336899999999999999 79999987 44555666777632
Q ss_pred CCcccchhHHHHHHHhHHHHHhhh---eeeccccccCCc-ccchhhhHHHHHHHHHHHHHHHHHhhccc--hhHhHHHHH
Q 001023 1017 RQECYNTKLFWLTMADTLWQSVVI---FFIPFGAYWDST-IDVSSIGDLWTLAVVILVNIHLAMDVIRW--TWITHAVIW 1090 (1185)
Q Consensus 1017 ~~~~~~~~~~~~~~~~~~~~~~vi---f~~~~~~~~g~~-~~~~~~~~~~~~~~v~~~~~~~~l~~~~~--~~~~~~~i~ 1090 (1185)
+...+. ..++..|++.+++. |++.++...... .....+.+.+|+.+++...+.+. .+++. .++.+...+
T Consensus 730 ~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~-~~R~~~~~~~~n~~~~ 804 (867)
T TIGR01524 730 EQKGMG----RFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVH-MIRTEKIPFIQSRAAA 804 (867)
T ss_pred ChhhHH----HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHH-hhCcCCCCcCcchHHH
Confidence 222221 22333455443332 322111111010 01112345667777777666653 33332 334566667
Q ss_pred HHHHHHHHHHHHHhccCCC--chHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHHH-HHHHh
Q 001023 1091 GSIIATLICVMIIDAVPSL--PGYWAFFEVAK--TRLFWFCLMIILVAALIPRFLVK-FLYQY 1148 (1185)
Q Consensus 1091 ~si~~~~i~~~i~~~i~~~--~~~~~~~~~~~--~~~~wl~~llv~~~~~l~~~~~k-~~~r~ 1148 (1185)
..+++.+++.++..++|.+ +. .|..... .+..|+.++.+.++ +...+.| .+.|+
T Consensus 805 ~~~~~~~~~~~~~~~~p~~~~~~--~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~ 863 (867)
T TIGR01524 805 PVMIATLLVMALGIIIPFSPLGH--SIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRR 863 (867)
T ss_pred HHHHHHHHHHHHHHHhchhhhhh--hhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 7777777777666677753 33 2333322 34456665554443 3344444 34333
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=885.85 Aligned_cols=698 Identities=18% Similarity=0.215 Sum_probs=553.7
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDY 165 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed~ 165 (1185)
...|+++||+|.++..+.+.| +.+++||.++.++.++++++++++ .+.|...+.++++++++.+.++++++
T Consensus 7 a~~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~-----~~~~~~~~~i~~~~~i~~~i~~~qe~ 77 (755)
T TIGR01647 7 AKKRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIA-----LENWVDFVIILGLLLLNATIGFIEEN 77 (755)
T ss_pred HHHHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHh-----hcchhhhhhhhhhhHHHHHHHHHHHH
Confidence 345789999999998666544 788999999999999999999988 46777778888888999999999999
Q ss_pred HHhhhhHH---hhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeec
Q 001023 166 RRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRY 242 (1185)
Q Consensus 166 ~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~ 242 (1185)
+..++.+. ..+.+++|+|||++++|+.++|+|||||.|++||.||||++|+++++ +.||||.|||||.|+.|.
T Consensus 78 ~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 78 KAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEec
Confidence 98887554 45788999999999999999999999999999999999999999544 999999999999999999
Q ss_pred ccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchh---hh
Q 001023 243 AKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV---ML 319 (1185)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki---~~ 319 (1185)
+++.. |+||.+.+|. +.++|+.||.+|.+ .+
T Consensus 154 ~~~~v-------------------------~aGT~v~~G~---------------------~~~~V~~tG~~T~~g~i~~ 187 (755)
T TIGR01647 154 TGDIA-------------------------YSGSTVKQGE---------------------AEAVVTATGMNTFFGKAAA 187 (755)
T ss_pred cCCee-------------------------eccCEEEccE---------------------EEEEEEEcCCccHHHHHHH
Confidence 88766 9999999988 99999999999954 44
Q ss_pred ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHH
Q 001023 320 NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399 (1185)
Q Consensus 320 n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1185)
...+++..++++++.++++..++.++.++++++.++++.+.... .+..
T Consensus 188 lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~--------------------------------~~~~ 235 (755)
T TIGR01647 188 LVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGE--------------------------------SFRE 235 (755)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------------------------------CHHH
Confidence 45556667789999999999999888888887776655431110 1233
Q ss_pred HHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEE
Q 001023 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFR 479 (1185)
Q Consensus 400 ~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~ 479 (1185)
.+..++.+++.+|||+||++++++....+..+ +++++++|+++.+|.||.+|+||||||||||+|+|++.
T Consensus 236 ~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~----------ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~ 305 (755)
T TIGR01647 236 GLQFALVLLVGGIPIAMPAVLSVTMAVGAAEL----------AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSID 305 (755)
T ss_pred HHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH----------HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEE
Confidence 67788999999999999999999888877666 88999999999999999999999999999999999999
Q ss_pred EEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccC
Q 001023 480 CASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDT 559 (1185)
Q Consensus 480 ~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~ 559 (1185)
+++..+..+ + .++++...++|+..
T Consensus 306 ~~~~~~~~~-------------------------------~------------------~~~~l~~a~~~~~~------- 329 (755)
T TIGR01647 306 EILPFFNGF-------------------------------D------------------KDDVLLYAALASRE------- 329 (755)
T ss_pred EEEecCCCC-------------------------------C------------------HHHHHHHHHHhCCC-------
Confidence 887532100 0 11234445555321
Q ss_pred CCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCC-CcEEE
Q 001023 560 SDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPD-KTVTL 638 (1185)
Q Consensus 560 ~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~l 638 (1185)
.++||.|.|+++++++.+. ... .|++++.+||++.+|+|+++++.++ |+.++
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~----------------~~~-~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~ 382 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE----------------ARD-GYKVLEFVPFDPVDKRTEATVEDPETGKRFK 382 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH----------------HHh-cCceEEEeccCCCCCeEEEEEEeCCCceEEE
Confidence 1369999999998876431 012 6778889999999999999998764 78889
Q ss_pred EEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 001023 639 FVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 718 (1185)
Q Consensus 639 ~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~i 718 (1185)
++|||++.|+++|+.. .+.++++.+.+++++.+|+|++++|+|. .
T Consensus 383 ~~kGa~e~il~~c~~~--~~~~~~~~~~~~~~~~~G~rvl~vA~~~---------------------------------~ 427 (755)
T TIGR01647 383 VTKGAPQVILDLCDNK--KEIEEKVEEKVDELASRGYRALGVARTD---------------------------------E 427 (755)
T ss_pred EEeCChHHHHHhcCCc--HHHHHHHHHHHHHHHhCCCEEEEEEEEc---------------------------------C
Confidence 9999999999999753 3456778888999999999999999972 1
Q ss_pred ccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHH
Q 001023 719 ENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAI 798 (1185)
Q Consensus 719 E~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~ 798 (1185)
|++|+++|+++++|++|++++++|++|+++||+|+|+|||++.||.+||++|||.+.. .++. +
T Consensus 428 e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~-----~~~~---~--------- 490 (755)
T TIGR01647 428 EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNI-----YTAD---V--------- 490 (755)
T ss_pred CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-----cCHH---H---------
Confidence 4689999999999999999999999999999999999999999999999999996421 0000 0
Q ss_pred HhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC
Q 001023 799 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS 878 (1185)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g 878 (1185)
+.+|++++...+++ +.++...++ +|||++|+||.++|+.+|+ .|
T Consensus 491 -----------------------------l~~~~~~~~~~~~~----~~~~~~~~~--vfAr~~Pe~K~~iV~~lq~-~G 534 (755)
T TIGR01647 491 -----------------------------LLKGDNRDDLPSGE----LGEMVEDAD--GFAEVFPEHKYEIVEILQK-RG 534 (755)
T ss_pred -----------------------------hcCCcchhhCCHHH----HHHHHHhCC--EEEecCHHHHHHHHHHHHh-cC
Confidence 11222222222223 444444555 9999999999999999999 89
Q ss_pred CeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhhHHHH
Q 001023 879 DMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLV 955 (1185)
Q Consensus 879 ~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~ 955 (1185)
++|+|+|||+||+|||++|||||+| +|++. |+++||+++.+.++ +..+ +.+||..|+|+++++.|.+..|+..+
T Consensus 535 ~~VamvGDGvNDapAL~~AdVGIAm~~gtdv--AkeaADivLl~d~l~~I~~a-i~~gR~~~~ni~k~i~~~~~~n~~~~ 611 (755)
T TIGR01647 535 HLVGMTGDGVNDAPALKKADVGIAVAGATDA--ARSAADIVLTEPGLSVIVDA-ILESRKIFQRMKSYVIYRIAETIRIV 611 (755)
T ss_pred CEEEEEcCCcccHHHHHhCCeeEEecCCcHH--HHHhCCEEEEcCChHHHHHH-HHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 9999999999999999999999999 56666 99999999998666 6666 89999999999999999999999887
Q ss_pred HHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHH
Q 001023 956 FVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLW 1035 (1185)
Q Consensus 956 ~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~ 1035 (1185)
+..++..++.+| ++++++++|.|++.+. |+++++....+++ +.|+ ...+. +.+...+..|++
T Consensus 612 ~~~~~~~l~~~~----~l~~~~il~~~l~~d~-~~~~l~~~~~~~~-----~~p~-------~~~~~-~~~~~~~~~g~~ 673 (755)
T TIGR01647 612 FFFGLLILILNF----YFPPIMVVIIAILNDG-TIMTIAYDNVKPS-----KLPQ-------RWNLR-EVFTMSTVLGIY 673 (755)
T ss_pred HHHHHHHHHhCc----chhHHHHHHHHHHHhH-hHhhccCCCCCCC-----CCCC-------ccchH-HHHHHHHHHHHH
Confidence 766666554443 3899999999999985 7899987543321 2232 22222 344445677877
Q ss_pred HHhhheeecccccc--------CCcccchhhhHHHHHHHHHHHHHHHHH
Q 001023 1036 QSVVIFFIPFGAYW--------DSTIDVSSIGDLWTLAVVILVNIHLAM 1076 (1185)
Q Consensus 1036 ~~~vif~~~~~~~~--------g~~~~~~~~~~~~~~~~v~~~~~~~~l 1076 (1185)
.++..|.++++... +.........+++|+.+++...+.+..
T Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~ 722 (755)
T TIGR01647 674 LVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFV 722 (755)
T ss_pred HHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHhe
Confidence 77766555332221 111122345688888888877766543
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-88 Score=790.97 Aligned_cols=797 Identities=18% Similarity=0.215 Sum_probs=572.6
Q ss_pred cccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHHHHHh
Q 001023 89 EKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRH 168 (1185)
Q Consensus 89 ~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed~~r~ 168 (1185)
|+.-||+|.|..+..+.+ ..|+++..++++++..+..++|.. .+++.++..++++...|.+...+|.++..
T Consensus 169 r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~lW~~-----d~Y~~YA~cI~iisv~Si~~sv~e~r~qs 239 (1140)
T KOG0208|consen 169 RRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVALWLA-----DSYYYYAFCIVIISVYSIVLSVYETRKQS 239 (1140)
T ss_pred HHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhhhhc-----ccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999988 899999999999999999999887 57888888888888999999999988888
Q ss_pred hhhHHhhc--ceEEEEeCCeEEEEeeeccccccEEEEcC-CCccCCceeEeeccCCCCcEEEEeccCCCCCCceeecccc
Q 001023 169 RSDRIENN--RLANVLVNNQFQEKKWKDIRVGEIIKIKT-NETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQ 245 (1185)
Q Consensus 169 k~d~~~n~--~~~~V~r~g~~~~i~~~~l~vGDIV~l~~-ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~ 245 (1185)
+..+++-. ..|+|+|+|.|++|.+++|+||||+.+.+ +-..|||++|++ |.|.||||+|||||.|+.|.|.+
T Consensus 240 ~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~-----g~civNEsmLTGESVPv~K~~l~ 314 (1140)
T KOG0208|consen 240 IRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLIS-----GDCIVNESMLTGESVPVTKTPLP 314 (1140)
T ss_pred HHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEe-----CcEEeecccccCCcccccccCCc
Confidence 77776654 46899999999999999999999999998 899999999999 77999999999999999999986
Q ss_pred cccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccc---hhhhccC
Q 001023 246 ETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSS 322 (1185)
Q Consensus 246 ~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~T---ki~~n~~ 322 (1185)
.-. ......+.+..-|.....|.||.++.-+... .+-+.++|++||..| .+.++.-
T Consensus 315 ~~~------~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~---------------g~~v~a~V~RTGF~T~KGqLVRsil 373 (1140)
T KOG0208|consen 315 MGT------DSLDSITISMSTNSRHTLFCGTKVLQARAYL---------------GGPVLAMVLRTGFSTTKGQLVRSIL 373 (1140)
T ss_pred ccc------ccCcCeeechhhcCcceeeccceEEEeecCC---------------CCceEEEEEeccccccccHHHHhhc
Confidence 210 0111123333445555667777777432110 134899999999999 4556666
Q ss_pred CCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHH
Q 001023 323 GAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFL 402 (1185)
Q Consensus 323 ~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (1185)
.++....++.+...+++..+.++. +++++...+..... ....-..+.
T Consensus 374 yPkP~~fkfyrds~~fi~~l~~ia----~~gfiy~~i~l~~~-----------------------------g~~~~~iii 420 (1140)
T KOG0208|consen 374 YPKPVNFKFYRDSFKFILFLVIIA----LIGFIYTAIVLNLL-----------------------------GVPLKTIII 420 (1140)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHH----HHHHHHHhHhHHHc-----------------------------CCCHHHHhh
Confidence 666666667776666665554443 33333333221111 011122678
Q ss_pred HHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEE
Q 001023 403 MSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCAS 482 (1185)
Q Consensus 403 ~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~ 482 (1185)
+++.++...+|.+||.++.+.....-.++ .+++|.|-+++.+...|++|++|||||||||++.+++.++.
T Consensus 421 rsLDliTi~VPPALPAaltvG~~~a~~RL----------kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 421 RSLDLITIVVPPALPAALTVGIIYAQSRL----------KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred hhhcEEEEecCCCchhhhhHHHHHHHHHH----------HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 99999999999999999998877665555 88999999999999999999999999999999999998886
Q ss_pred EeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCCCC
Q 001023 483 IWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDP 562 (1185)
Q Consensus 483 i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~ 562 (1185)
.-...-..+ .+.. . . .++.....-....+........|..++|.||+.....+.
T Consensus 491 ~~~~~~~~~-~~~~--~------------------~-~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~---- 544 (1140)
T KOG0208|consen 491 PVERNVDDG-PELK--V------------------V-TEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGT---- 544 (1140)
T ss_pred ecccccccc-chhh--h------------------h-hhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCe----
Confidence 522110000 0000 0 0 000000000000111122245788999999988763211
Q ss_pred CCcceeeecCChhHHHHHHHHHHcCCEEEEec---------C--CeEEEEecC---------ceeeeEEEEEeecCCCCC
Q 001023 563 NVKLVDYQGESPDEQALVYAAAAYGFMLIERT---------S--GHIVIDIQG---------QRQSRFNVLGLHEFDSDR 622 (1185)
Q Consensus 563 ~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~---------~--~~~~i~~~g---------~~~~~~~il~~~~F~s~r 622 (1185)
-.++|.|.-+.+. .|+.+.+.. + ....++... ... .+-+++.+||+|..
T Consensus 545 -------l~GDPLdlkmfe~---t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~-~~si~k~feF~S~L 613 (1140)
T KOG0208|consen 545 -------LVGDPLDLKMFES---TGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEG-EISIVKQFEFSSAL 613 (1140)
T ss_pred -------eccCceeeeeeec---cceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCc-ceEEEEecccchhh
Confidence 1246666655543 344443311 0 011121110 112 58899999999999
Q ss_pred ceEEEEEecC-CCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001023 623 KRMSVILGLP-DKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAAS 701 (1185)
Q Consensus 623 krmsviv~~~-~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~ 701 (1185)
+||||||.++ +.+..+|+|||||.|.+.|++. .+++++++.+++|+.+|+|++++|+|+++.. .|.+..+
T Consensus 614 rRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~---tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~~--- 684 (1140)
T KOG0208|consen 614 RRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE---TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQK--- 684 (1140)
T ss_pred heEEEEEecCCCCceEeeccCCHHHHHHhcCcc---cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHhh---
Confidence 9999999986 5779999999999999999965 7899999999999999999999999999876 3322111
Q ss_pred hhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEE
Q 001023 702 NALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 781 (1185)
Q Consensus 702 ~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~ 781 (1185)
.. .+.+|.||+|+|++.+|++||+.++.+|+.|++|+|++.|+||||..||+.+|++||++.+..++++
T Consensus 685 ---~~--------Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~ 753 (1140)
T KOG0208|consen 685 ---LS--------RDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVII 753 (1140)
T ss_pred ---cc--------HhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEE
Confidence 12 3678999999999999999999999999999999999999999999999999999999999988887
Q ss_pred EeCCC-HHHHHHHHHHHHHhhcccccCC--C---CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCe
Q 001023 782 INSNS-KESCRKSLEDAIAMSKKLKTVP--G---VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSV 855 (1185)
Q Consensus 782 i~~~~-~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~ 855 (1185)
..... .++...++++...++.+..... . ....+.+.+.-....+.+.++|+.+..++ .+..+.+.++..+|+
T Consensus 754 ~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~~~- 831 (1140)
T KOG0208|consen 754 PELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLKGT- 831 (1140)
T ss_pred EeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhcCe-
Confidence 77662 2222222222222222111000 0 00000001112356799999999999888 566777888888888
Q ss_pred eEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecch--hhHHHHHHHHh
Q 001023 856 VLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF--RFLVTLLLVHG 933 (1185)
Q Consensus 856 vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f--~~l~~lll~~G 933 (1185)
|||||+|.||+++|..+|+ .|++|+|||||||||+||++|||||++|.+| |+.||.|...-+ +..-.+ +.+|
T Consensus 832 -VfARMsP~qK~~Lie~lQk-l~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~v-IrEG 905 (1140)
T KOG0208|consen 832 -VFARMSPDQKAELIEALQK-LGYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDV-IREG 905 (1140)
T ss_pred -EEeecCchhHHHHHHHHHh-cCcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHH-Hhhh
Confidence 9999999999999999999 8999999999999999999999999999999 899999998744 444444 9999
Q ss_pred hHHHHHhhhhhhhhhhhh-HHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCccc
Q 001023 934 HWNYQRMGYMILYNFYRN-AVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLY 1012 (1185)
Q Consensus 934 r~~~~ri~~~i~~~~~~n-i~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly 1012 (1185)
|..+-.--..+.|.-.+. +.|+.+.|+|. -...+++.|.++..++....-+++++-+ |...+...+.|.
T Consensus 906 RaALVTSf~~FkYMalYs~iqFisv~~LY~------~~~nl~D~Qfl~iDLlii~pia~~m~~~--~a~~~L~~~rP~-- 975 (1140)
T KOG0208|consen 906 RAALVTSFACFKYMALYSAIQFISVVFLYL------INSNLGDLQFLFIDLLIITPIAVMMSRF--DASDKLFPKRPP-- 975 (1140)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhheeee------ecccccchhhhhhHHHHHHHHHHHHccC--cHHHHhcCCCCC--
Confidence 997655555444443222 33444444443 3456889999999988865555555544 444443333443
Q ss_pred ccccCCcccchhHHH----HHHHhHHHHHhhheee
Q 001023 1013 GAGHRQECYNTKLFW----LTMADTLWQSVVIFFI 1043 (1185)
Q Consensus 1013 ~~~~~~~~~~~~~~~----~~~~~~~~~~~vif~~ 1043 (1185)
..+++.+.+. ..++..++|.+..++.
T Consensus 976 -----~~L~s~~~~~~l~~q~vli~l~q~i~~l~~ 1005 (1140)
T KOG0208|consen 976 -----TNLLSKKILVPLLLQIVLICLVQWILTLIV 1005 (1140)
T ss_pred -----ccccccchhhhhHHHHHHHHHHHHhhheee
Confidence 3455554443 3556666666666655
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-85 Score=756.76 Aligned_cols=874 Identities=19% Similarity=0.199 Sum_probs=652.1
Q ss_pred cccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcc---cc-----cCccchhhhHHHHHHHHHHHH
Q 001023 89 EKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL---AV-----FGRGVSILPLAFVLSVTAIKD 160 (1185)
Q Consensus 89 ~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~---~~-----~~~~~~~~~l~~vi~~s~i~~ 160 (1185)
++.+-|+|..+.+|-+.=+ ..+..|++..+.+..++.++++++... +. -......+.|..+++++.+-.
T Consensus 67 ~L~rdG~NaL~Ppk~t~~w---ikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~ 143 (1019)
T KOG0203|consen 67 KLARDGPNALTPPKTTPEW---IKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFS 143 (1019)
T ss_pred hhccCCCCCCCCCCCChHH---HHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCC
Confidence 6788999999999987743 557789999999999999988875421 11 123334455667777777777
Q ss_pred HHHHHHHhhh---hHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCC
Q 001023 161 AYEDYRRHRS---DRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESN 237 (1185)
Q Consensus 161 ~~ed~~r~k~---d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~ 237 (1185)
++|+.+-.+- -+.+-++.+.|+|||+...+..++|+|||+|.++-|+++|||++++++.+ |+||+|+|||||.
T Consensus 144 ~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGesE 219 (1019)
T KOG0203|consen 144 YYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGESE 219 (1019)
T ss_pred CccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEeccccccccC
Confidence 7777766544 44556889999999999999999999999999999999999999999987 9999999999999
Q ss_pred ceeecccccccccCcccccceeEEEecCC-CCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccch
Q 001023 238 LKTRYAKQETLLKVPEKETISGLIKCEKP-NRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETK 316 (1185)
Q Consensus 238 ~~~K~~~~~~~~~~~~~~~~~~~i~~e~p-n~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tk 316 (1185)
|..+.+.... +.| ......|.+|..++|. ++|+|++||.+|.
T Consensus 220 P~~~~~~~t~----------------~~~~Et~Ni~f~st~~veG~---------------------~~givi~tGd~Tv 262 (1019)
T KOG0203|consen 220 PQTRSPEFTH----------------ENPLETRNIAFFSTNCVEGT---------------------GRGIVIATGDRTV 262 (1019)
T ss_pred CccCCccccc----------------cCchhheeeeeeeeEEecce---------------------EEEEEEecCCceE
Confidence 9888765322 111 0111236666666666 9999999999997
Q ss_pred hhhcc---CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccc
Q 001023 317 VMLNS---SGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGW 393 (1185)
Q Consensus 317 i~~n~---~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~ 393 (1185)
+.+.+ ......++++++.+++++.++..+.+++.+..+++......
T Consensus 263 ~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy------------------------------- 311 (1019)
T KOG0203|consen 263 MGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY------------------------------- 311 (1019)
T ss_pred EeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc-------------------------------
Confidence 65443 34567899999999999999988888887777766554321
Q ss_pred hhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCcccc
Q 001023 394 GLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTE 473 (1185)
Q Consensus 394 ~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~ 473 (1185)
.++..+...+++.+..+|.+|++++.....+-+.+| +++++++|++.+.|.||...+||||||||||+
T Consensus 312 --~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM----------a~Knc~vknLeavetlGsts~I~SDktGTlTq 379 (1019)
T KOG0203|consen 312 --EWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQ 379 (1019)
T ss_pred --hhHHHhhhhheeEEecCcCCccceehhhHHHHHHHH----------hhceeEEeeeeheeecccceeEeecceeeEEe
Confidence 123345557889999999999999988888778766 89999999999999999999999999999999
Q ss_pred ceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccc
Q 001023 474 NKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIV 553 (1185)
Q Consensus 474 n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~ 553 (1185)
|+|.|.++|.++.......++.. ........+.....+.++..+||.+.
T Consensus 380 nrMtVahlw~d~~i~~~d~~~~~-------------------------------~~~~~~~~~~~~~~l~r~~~lCn~a~ 428 (1019)
T KOG0203|consen 380 NRMTVAHLWFDNQIHEADTTEDQ-------------------------------SGQSFDKSSATFIALSRIATLCNRAV 428 (1019)
T ss_pred cceEEEeeccCCceeeeechhhh-------------------------------hcccccccCchHHHHHHHHHHhCcce
Confidence 99999999987654321111000 00011122455667899999999998
Q ss_pred cccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCC
Q 001023 554 PLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPD 633 (1185)
Q Consensus 554 ~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~ 633 (1185)
...++..-+. .-.-..+++.|.||++++.-.-... ...++ .++.+...||+|.+|..-.+-+..+
T Consensus 429 ~~~gq~dvPv--~kk~v~G~~se~ALlk~~e~~~~~~------------~~~R~-~~~kv~eipfNSt~Kyqlsih~~~d 493 (1019)
T KOG0203|consen 429 FKPGQDDVPV--LKRDVAGDASEVALLKFIELILGSV------------MELRE-RNPKVAEIPFNSTNKYQLSIHETED 493 (1019)
T ss_pred ecccccCCce--eeeeccCCHHHHHHHHHHHHhcchH------------HHHHH-hhHHhhcCCcccccceEEEEEecCC
Confidence 7322211111 1112357999999999986532211 11234 6777889999999999988887655
Q ss_pred ---CcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHh
Q 001023 634 ---KTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASN 702 (1185)
Q Consensus 634 ---~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~ 702 (1185)
.+..+.+|||||.++++|+... ++...+.+.+...++...|-|++.+|++.+++++|.+.-. |+
T Consensus 494 ~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~-f~---- 568 (1019)
T KOG0203|consen 494 PSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQ-FD---- 568 (1019)
T ss_pred CCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceE-ee----
Confidence 6789999999999999997642 5667888999999999999999999999999876543110 00
Q ss_pred hhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEE
Q 001023 703 ALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVII 782 (1185)
Q Consensus 703 ~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i 782 (1185)
.. .-..--.+|.|+|.+++-||+|..+|+++.++|.|||||.|+|||++-||.+||++.||+..+.+..
T Consensus 569 -~d--------~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~-- 637 (1019)
T KOG0203|consen 569 -TD--------DVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETV-- 637 (1019)
T ss_pred -cC--------CCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhh--
Confidence 00 0011224899999999999999999999999999999999999999999999999999987653211
Q ss_pred eCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecC
Q 001023 783 NSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA 862 (1185)
Q Consensus 783 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~s 862 (1185)
++ +.+.+.. ...+. .+....+.|+.|.+|..+.++ ++.++.+...-+||+|.|
T Consensus 638 --------e~-~a~r~~~--------~v~~v------n~~~a~a~VihG~eL~~~~~~----qld~il~nh~eIVFARTS 690 (1019)
T KOG0203|consen 638 --------ED-IAKRLNI--------PVEQV------NSRDAKAAVIHGSELPDMSSE----QLDELLQNHQEIVFARTS 690 (1019)
T ss_pred --------hh-hHHhcCC--------ccccc------CccccceEEEecccccccCHH----HHHHHHHhCCceEEEecC
Confidence 11 1111100 00000 113456889999999877664 455556667778999999
Q ss_pred cccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe--cCcchhHHhhcCceeecchhhHHHHH-HHHhhHHHHH
Q 001023 863 PLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTLL-LVHGHWNYQR 939 (1185)
Q Consensus 863 P~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~f~~l~~ll-l~~Gr~~~~r 939 (1185)
|+||..||+..|+ .|.+|+.+|||+||+|||+.|||||+| +|++. ++.|||+++.|++|....- +.+||-+|.|
T Consensus 691 PqQKLiIVe~cQr-~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDv--sKqAADmILLDDNFASIVtGVEEGRLiFDN 767 (1019)
T KOG0203|consen 691 PQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV--SKQAADMILLDDNFASIVTGVEEGRLIFDN 767 (1019)
T ss_pred ccceEEeEhhhhh-cCcEEEEeCCCcCCChhhcccccceeeccccchH--HHhhcceEEecCcchhheeecccceehhhh
Confidence 9999999999999 999999999999999999999999966 88888 9999999999998855332 6799999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCc
Q 001023 940 MGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQE 1019 (1185)
Q Consensus 940 i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~ 1019 (1185)
++|.|.|.+..|+.-+.+.++|.++. .+.++..+.++.+.+..+..|+++++++. +..+.+++.|+ ....+.
T Consensus 768 LKKsIAYTLTsNipEI~PfL~fi~~g---iPLplgtitIL~IDLgTDmvPAiSLAYE~--aEsDIM~r~PR---~p~~D~ 839 (1019)
T KOG0203|consen 768 LKKSIAYTLTSNIPEITPFLLFILFG---IPLPLGTVTILCIDLGTDIVPAISLAYEK--AESDIMLRPPR---NPKDDK 839 (1019)
T ss_pred HHHHHHHHHHhcchhHhHHHHHHHhC---CCcccchhhhhhhHhhcccchhhhHhccC--chhhHHhcCCC---CCcccc
Confidence 99999999999999998888877764 56779999999999999999999999842 33444445565 335677
Q ss_pred ccchhHHH-HHHHhHHHHHhhheeecccc----------------------------ccCCcccchh-------hhHHHH
Q 001023 1020 CYNTKLFW-LTMADTLWQSVVIFFIPFGA----------------------------YWDSTIDVSS-------IGDLWT 1063 (1185)
Q Consensus 1020 ~~~~~~~~-~~~~~~~~~~~vif~~~~~~----------------------------~~g~~~~~~~-------~~~~~~ 1063 (1185)
+.|.+++. .++..|.+|++..|+.|+.. +.|+.....+ ..+..|
T Consensus 840 LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFf 919 (1019)
T KOG0203|consen 840 LVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFF 919 (1019)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhhee
Confidence 88888774 47888999999988774321 1233332222 122333
Q ss_pred HHHHHHHHHHHHHh-hccchhHh----HHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHH
Q 001023 1064 LAVVILVNIHLAMD-VIRWTWIT----HAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIP 1138 (1185)
Q Consensus 1064 ~~~v~~~~~~~~l~-~~~~~~~~----~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~ 1138 (1185)
.++++++-..+.+. +++-+.++ ++.+++++++-.++..++++.|.... .+...+.-+.+|++-+...+..++.
T Consensus 920 vsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~--~l~~~pl~~~~wl~a~P~~ilIfvy 997 (1019)
T KOG0203|consen 920 ISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLY--ALGMYPLKFQWWLVAFPFGILIFVY 997 (1019)
T ss_pred eeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHH--HhccCCCCcEEEEecccceeeeeeH
Confidence 33444443344433 44444444 35677777777777777778875333 3445556678999888888888899
Q ss_pred HHHHHHHHHhhCC
Q 001023 1139 RFLVKFLYQYYYP 1151 (1185)
Q Consensus 1139 ~~~~k~~~r~f~p 1151 (1185)
+++-|++-|+|=-
T Consensus 998 dE~Rk~~IR~~P~ 1010 (1019)
T KOG0203|consen 998 DEVRKLFIRRYPG 1010 (1019)
T ss_pred HHHHhHhhhhCCC
Confidence 9999998887643
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-75 Score=704.52 Aligned_cols=589 Identities=17% Similarity=0.212 Sum_probs=442.6
Q ss_pred HHhhHHHHHHHHHHHHHhhcCccccc----Ccc--chhhhHHHHHHHHHH-HHHHH---HHHHhhhhHHhh---cc-eEE
Q 001023 115 EQFHRVAYIYFLVIAVLNQLPQLAVF----GRG--VSILPLAFVLSVTAI-KDAYE---DYRRHRSDRIEN---NR-LAN 180 (1185)
Q Consensus 115 ~qf~~~~n~~fl~~~il~~~~~~~~~----~~~--~~~~~l~~vi~~s~i-~~~~e---d~~r~k~d~~~n---~~-~~~ 180 (1185)
.||++|..+.+++.++++++....+. ..+ .+.+.++++++++.+ ..+.| ++|..++...+. +. +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 46788888888888888875322111 111 223333344444433 33333 555555544333 33 565
Q ss_pred -EEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeeccc---ccccccCccccc
Q 001023 181 -VLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAK---QETLLKVPEKET 256 (1185)
Q Consensus 181 -V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~---~~~~~~~~~~~~ 256 (1185)
|.|||++++|+.++|+|||+|.|++||.||||+++++ |.+.||||.|||||.|+.|.++ +..
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~d~~~V--------- 173 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK-----GLATVDESAITGESAPVIKESGGDFDNV--------- 173 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE-----cceEEecchhcCCCCceeccCCCccCee---------
Confidence 6789999999999999999999999999999999999 5589999999999999999987 333
Q ss_pred ceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccc---hhhhccCCCCCCcCHHHH
Q 001023 257 ISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEM 333 (1185)
Q Consensus 257 ~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~ 333 (1185)
|+||.+.+|. +.++|+.||.+| |+....+.++.++||+|.
T Consensus 174 ----------------~aGT~v~~G~---------------------~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 174 ----------------IGGTSVASDW---------------------LEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred ----------------ecCceeecce---------------------EEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 8888888887 999999999999 455556677778899998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhcccc
Q 001023 334 HMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIP 413 (1185)
Q Consensus 334 ~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP 413 (1185)
.+..+...+.++.+++ +.++.. +.. |. .+...+...+.+.+++||
T Consensus 217 ~l~~l~~~l~ii~l~~--~~~~~~-~~~------------~~--------------------~~~~~~~~~val~V~~IP 261 (673)
T PRK14010 217 ALFTLLMTLTIIFLVV--ILTMYP-LAK------------FL--------------------NFNLSIAMLIALAVCLIP 261 (673)
T ss_pred HHHHHHHHHhHHHHHH--HHHHHH-HHh------------hc--------------------cHHHHHHHHHHHHHHhhh
Confidence 8776654443322211 111110 000 00 011245566777778899
Q ss_pred chhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCC
Q 001023 414 ISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNA 493 (1185)
Q Consensus 414 ~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~ 493 (1185)
|+|+..++++...+...+ +++++++|+.+.+|.||.+|+||||||||||+|++.+..+... .
T Consensus 262 ~aL~~~~~~~~~~g~~r~----------ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~----~---- 323 (673)
T PRK14010 262 TTIGGLLSAIGIAGMDRV----------TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPV----K---- 323 (673)
T ss_pred hhHHHHHHHHHHHHHHHH----------hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeC----C----
Confidence 999998888777666555 8999999999999999999999999999999977666553210 0
Q ss_pred CCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCC
Q 001023 494 RSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGES 573 (1185)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~s 573 (1185)
+ ...++++...++|+.. +.|
T Consensus 324 --------------------------~----------------~~~~~ll~~a~~~~~~------------------s~~ 343 (673)
T PRK14010 324 --------------------------S----------------SSFERLVKAAYESSIA------------------DDT 343 (673)
T ss_pred --------------------------C----------------ccHHHHHHHHHHhcCC------------------CCC
Confidence 0 0112345556666532 249
Q ss_pred hhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHh
Q 001023 574 PDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAK 653 (1185)
Q Consensus 574 p~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~ 653 (1185)
|.+.|+++++++.|+... ....+..||++++|+|++.+. ++ .+.|||++.+.++|..
T Consensus 344 P~~~AIv~~a~~~~~~~~------------------~~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~ 400 (673)
T PRK14010 344 PEGRSIVKLAYKQHIDLP------------------QEVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKE 400 (673)
T ss_pred hHHHHHHHHHHHcCCCch------------------hhhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhh
Confidence 999999999988765321 001124799999999999763 33 4559999999999986
Q ss_pred hcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccc
Q 001023 654 ALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDK 733 (1185)
Q Consensus 654 ~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~ 733 (1185)
. +...+.++.+..++++++|+|+++++. |++++|+++++|+
T Consensus 401 ~-g~~~~~~~~~~~~~~a~~G~~~l~v~~--------------------------------------~~~~lG~i~l~Dp 441 (673)
T PRK14010 401 A-GGHIPVDLDALVKGVSKKGGTPLVVLE--------------------------------------DNEILGVIYLKDV 441 (673)
T ss_pred c-CCCCchHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEeecC
Confidence 4 333444567778889999999998763 7899999999999
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 813 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1185)
+|+|++++|++||++||+++|+|||+..||.+||+++|+.+
T Consensus 442 ~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~--------------------------------------- 482 (673)
T PRK14010 442 IKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR--------------------------------------- 482 (673)
T ss_pred CcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce---------------------------------------
Confidence 99999999999999999999999999999999999999942
Q ss_pred ccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhh
Q 001023 814 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSM 893 (1185)
Q Consensus 814 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~m 893 (1185)
+++|++|+||.++|+.+|+ .|++|+|+|||+||+||
T Consensus 483 -------------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPA 518 (673)
T PRK14010 483 -------------------------------------------FVAECKPEDKINVIREEQA-KGHIVAMTGDGTNDAPA 518 (673)
T ss_pred -------------------------------------------EEcCCCHHHHHHHHHHHHh-CCCEEEEECCChhhHHH
Confidence 8999999999999999999 89999999999999999
Q ss_pred hhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccch
Q 001023 894 IQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLT 970 (1185)
Q Consensus 894 L~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~ 970 (1185)
|++|||||+| +|++. |+++||+++.+.++ +..+ +..||..|.++++++.|++..|+.-++..+...|...|...
T Consensus 519 La~ADVGIAMgsGTdv--AkeAADiVLldd~ls~Iv~a-v~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~ 595 (673)
T PRK14010 519 LAEANVGLAMNSGTMS--AKEAANLIDLDSNPTKLMEV-VLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAM 595 (673)
T ss_pred HHhCCEEEEeCCCCHH--HHHhCCEEEcCCCHHHHHHH-HHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccc
Confidence 9999999999 67776 99999999998766 6666 89999999999999999999999988887776666555443
Q ss_pred hhhhHH----------HHHHHHHH--hhhHHHHHhhhccccCChHHHhcCC-cccccc
Q 001023 971 TAINEW----------SSVLYSVI--YTSLPTIVVAILDKDLSRRTLLQNP-QLYGAG 1015 (1185)
Q Consensus 971 ~~~~~~----------~l~~~n~i--~t~lp~i~l~~~d~d~~~~~~~~~P-~ly~~~ 1015 (1185)
..+|-+ .-+.||.+ .-.+|.-.-|+-.++.+...++++- -.|..|
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (673)
T PRK14010 596 NHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGLG 653 (673)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEeccC
Confidence 333322 12455532 2345656667777888877777654 466554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-74 Score=699.85 Aligned_cols=596 Identities=17% Similarity=0.202 Sum_probs=455.3
Q ss_pred HHHhhHHHHHHHHHHHHHhhcCccccc---------CccchhhhHHHHHHHHHHHHHHHHHHHhhhhHHhh---cc-eEE
Q 001023 114 FEQFHRVAYIYFLVIAVLNQLPQLAVF---------GRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRIEN---NR-LAN 180 (1185)
Q Consensus 114 ~~qf~~~~n~~fl~~~il~~~~~~~~~---------~~~~~~~~l~~vi~~s~i~~~~ed~~r~k~d~~~n---~~-~~~ 180 (1185)
..||+++..+.+++.++++++..+.+. ..+...+.+++.+++....|.+.++|..++.+.+. +. +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 358889999999999999876432111 11222234444455555666677777776655444 33 699
Q ss_pred EEeCCe-EEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeecccccccccCccccccee
Q 001023 181 VLVNNQ-FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISG 259 (1185)
Q Consensus 181 V~r~g~-~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~ 259 (1185)
|+|+|+ +++++.++|++||+|.|++||.||||+++++ |.+.||||.|||||.|+.|.+++.-
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie-----G~a~VDESaLTGES~PV~K~~G~~~------------ 170 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE-----GVASVDESAITGESAPVIRESGGDF------------ 170 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE-----ccEEEEcccccCCCCceEeCCCCcc------------
Confidence 999887 8999999999999999999999999999999 5689999999999999999987651
Q ss_pred EEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccc---hhhhccCCCCCCcCHHHHHHH
Q 001023 260 LIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMN 336 (1185)
Q Consensus 260 ~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~ 336 (1185)
| ..|+||.+.+|. +.+.|+.+|.+| |+....+.++.+++|+|..++
T Consensus 171 ------~----~V~aGT~v~~G~---------------------~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~ 219 (679)
T PRK01122 171 ------S----SVTGGTRVLSDW---------------------IVIRITANPGESFLDRMIALVEGAKRQKTPNEIALT 219 (679)
T ss_pred ------C----eEEeceEEEeee---------------------EEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHH
Confidence 0 138899888887 999999999999 445556667777899999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchh
Q 001023 337 SEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISL 416 (1185)
Q Consensus 337 ~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL 416 (1185)
.+...++.+.++++++...+. .+.. . -..+...+.+++++|||+|
T Consensus 220 ~l~~~l~~i~l~~~~~~~~~~-~~~g-~---------------------------------~~~l~~~iallV~aiP~al 264 (679)
T PRK01122 220 ILLAGLTIIFLLVVATLPPFA-AYSG-G---------------------------------ALSITVLVALLVCLIPTTI 264 (679)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-HHhC-c---------------------------------hHHHHHHHHHHHHcccchh
Confidence 877666544443333222211 1110 0 0156677889999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCc
Q 001023 417 YISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSH 496 (1185)
Q Consensus 417 ~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~ 496 (1185)
+..++++.+.+...+ .++++++|+...+|.||++|+||||||||||+|+|.+.++...+..
T Consensus 265 g~l~~~i~i~g~~r~----------ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------- 325 (679)
T PRK01122 265 GGLLSAIGIAGMDRV----------LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------- 325 (679)
T ss_pred hhHHHHHHHHHHHHH----------hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC---------
Confidence 988887776655554 8899999999999999999999999999999999999877521100
Q ss_pred ccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhH
Q 001023 497 SEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDE 576 (1185)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e 576 (1185)
+ .++++.+.++|.... .||..
T Consensus 326 -----------------------~------------------~~~ll~~a~~~s~~s------------------~hP~~ 346 (679)
T PRK01122 326 -----------------------T------------------EEELADAAQLSSLAD------------------ETPEG 346 (679)
T ss_pred -----------------------C------------------HHHHHHHHHHhcCCC------------------CCchH
Confidence 0 123455566664332 37999
Q ss_pred HHHHHHHHH-cCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhc
Q 001023 577 QALVYAAAA-YGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL 655 (1185)
Q Consensus 577 ~alv~~a~~-~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~ 655 (1185)
.|++++|++ .+.... .. .|+..+..||++.+|+|++.+. | ..++|||++.+++.|...
T Consensus 347 ~AIv~~a~~~~~~~~~--------------~~-~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~- 405 (679)
T PRK01122 347 RSIVVLAKQRFNLRER--------------DL-QSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESN- 405 (679)
T ss_pred HHHHHHHHhhcCCCch--------------hh-ccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhc-
Confidence 999999986 343211 01 3455667899999988887653 3 578999999999999765
Q ss_pred chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccC
Q 001023 656 NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQ 735 (1185)
Q Consensus 656 ~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr 735 (1185)
+...++++.+.+++++++|+|++++|+ |++++|+++++|++|
T Consensus 406 g~~~~~~~~~~~~~~a~~G~~~l~va~--------------------------------------~~~~lG~i~l~D~~R 447 (679)
T PRK01122 406 GGHFPAELDAAVDEVARKGGTPLVVAE--------------------------------------DNRVLGVIYLKDIVK 447 (679)
T ss_pred CCcChHHHHHHHHHHHhCCCcEEEEEE--------------------------------------CCeEEEEEEEeccCc
Confidence 445567788889999999999999995 678999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCccc
Q 001023 736 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSE 815 (1185)
Q Consensus 736 ~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1185)
+|++++|++||++||+++|+|||++.||.+||++||+.+
T Consensus 448 ~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------------------------------- 486 (679)
T PRK01122 448 PGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------------------------------- 486 (679)
T ss_pred hhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------------------------------
Confidence 999999999999999999999999999999999999932
Q ss_pred CCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhh
Q 001023 816 RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQ 895 (1185)
Q Consensus 816 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~ 895 (1185)
+++|++|+||.++|+.+|+ .|++|+|+|||+||+|||+
T Consensus 487 -----------------------------------------v~A~~~PedK~~iV~~lQ~-~G~~VaMtGDGvNDAPALa 524 (679)
T PRK01122 487 -----------------------------------------FLAEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALA 524 (679)
T ss_pred -----------------------------------------EEccCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHH
Confidence 8999999999999999999 8999999999999999999
Q ss_pred hcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh
Q 001023 896 MADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTA 972 (1185)
Q Consensus 896 ~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~ 972 (1185)
+|||||+| +|++. |+++||+++.+.++ +... +.+||...-.-..+..|++.-.+.-+|..+-..|...|.+...
T Consensus 525 ~ADVGIAMgsGTdv--AkeAADiVLldd~~s~Iv~a-v~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~~~~ 601 (679)
T PRK01122 525 QADVGVAMNSGTQA--AKEAGNMVDLDSNPTKLIEV-VEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQLNA 601 (679)
T ss_pred hCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHHHH-HHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCccccc
Confidence 99999999 67777 99999999998666 6665 8999999977778888888766655554444333333333222
Q ss_pred hhHH----------HHHHHHHH--hhhHHHHHhhhccccCChHHHhcCC-cccccc
Q 001023 973 INEW----------SSVLYSVI--YTSLPTIVVAILDKDLSRRTLLQNP-QLYGAG 1015 (1185)
Q Consensus 973 ~~~~----------~l~~~n~i--~t~lp~i~l~~~d~d~~~~~~~~~P-~ly~~~ 1015 (1185)
+|-+ .-+.||.+ ...+|.-.-|+-.++.+...++++- -.|..|
T Consensus 602 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (679)
T PRK01122 602 LNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLG 657 (679)
T ss_pred cccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCC
Confidence 2222 22455632 3345666667777888877777654 466554
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-71 Score=668.25 Aligned_cols=596 Identities=17% Similarity=0.214 Sum_probs=451.5
Q ss_pred HHhhHHHHHHHHHHHHHhhcCcccc--c----C--ccchh---hhHHHHHHHHHHHHHHHHHHHhhhhHHhhc---c-eE
Q 001023 115 EQFHRVAYIYFLVIAVLNQLPQLAV--F----G--RGVSI---LPLAFVLSVTAIKDAYEDYRRHRSDRIENN---R-LA 179 (1185)
Q Consensus 115 ~qf~~~~n~~fl~~~il~~~~~~~~--~----~--~~~~~---~~l~~vi~~s~i~~~~ed~~r~k~d~~~n~---~-~~ 179 (1185)
.||+++..+.+++.++++++..+.+ . . .|..+ +.+++.+++....|.+.++|.+++...+++ . .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 5788998888888888887632211 0 1 12222 223344555556667777777777555543 3 47
Q ss_pred EEEe-CCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeecccccccccCcccccce
Q 001023 180 NVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETIS 258 (1185)
Q Consensus 180 ~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 258 (1185)
+|+| ||++++|+.++|+|||+|.|++||.||||+++++ |.+.||||.|||||.|+.|.+++..
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie-----G~~~VDESaLTGES~PV~K~~g~~~----------- 171 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE-----GVASVDESAITGESAPVIKESGGDF----------- 171 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ccEEEEcccccCCCCceeecCCCCc-----------
Confidence 7885 8999999999999999999999999999999999 6699999999999999999987642
Q ss_pred eEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccc---hhhhccCCCCCCcCHHHHHH
Q 001023 259 GLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHM 335 (1185)
Q Consensus 259 ~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~ 335 (1185)
...|+||.+.+|. +.+.|+.+|.+| ++....+.++.+++|+|..+
T Consensus 172 -----------~~V~aGT~v~~G~---------------------~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l 219 (675)
T TIGR01497 172 -----------ASVTGGTRILSDW---------------------LVVECTANPGETFLDRMIALVEGAQRRKTPNEIAL 219 (675)
T ss_pred -----------ceeecCcEEEeeE---------------------EEEEEEEecccCHHHHHHHHHHhcccCCChHHHHH
Confidence 0137888888777 999999999999 45555667777889999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccch
Q 001023 336 NSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPIS 415 (1185)
Q Consensus 336 ~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~s 415 (1185)
+.+..++.++.++++++.+. +..+. . . ...+...+.+++++|||+
T Consensus 220 ~~l~~~l~~v~li~~~~~~~-~~~~~--~------------------------------~--~~~~~~lvallV~aiP~a 264 (675)
T TIGR01497 220 TILLIALTLVFLLVTATLWP-FAAYG--G------------------------------N--AISVTVLVALLVCLIPTT 264 (675)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhc--C------------------------------h--hHHHHHHHHHHHHhCchh
Confidence 88776655443333222111 11110 0 0 113555688899999998
Q ss_pred hHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCC
Q 001023 416 LYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARS 495 (1185)
Q Consensus 416 L~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~ 495 (1185)
|+...+.+.+.+...+ .++++++|+...+|.||++|+||||||||||+|+|++.++...+.
T Consensus 265 Lg~l~~av~iag~~r~----------ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~--------- 325 (675)
T TIGR01497 265 IGGLLSAIGIAGMDRV----------LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG--------- 325 (675)
T ss_pred hhhHHHHHHHHHHHHH----------HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC---------
Confidence 8766665555444444 889999999999999999999999999999999999988753110
Q ss_pred cccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChh
Q 001023 496 HSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPD 575 (1185)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~ 575 (1185)
...++++...++|+.. .+||.
T Consensus 326 -----------------------------------------~~~~~ll~~aa~~~~~------------------s~hP~ 346 (675)
T TIGR01497 326 -----------------------------------------VDEKTLADAAQLASLA------------------DDTPE 346 (675)
T ss_pred -----------------------------------------CcHHHHHHHHHHhcCC------------------CCCcH
Confidence 0012345566666432 24899
Q ss_pred HHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhc
Q 001023 576 EQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKAL 655 (1185)
Q Consensus 576 e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~ 655 (1185)
+.|++++|++.|..... . .++..+..||++.+++|++.+. +| ..++|||++.+.+.|...
T Consensus 347 a~Aiv~~a~~~~~~~~~--------------~-~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~- 406 (675)
T TIGR01497 347 GKSIVILAKQLGIREDD--------------V-QSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEAN- 406 (675)
T ss_pred HHHHHHHHHHcCCCccc--------------c-ccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhc-
Confidence 99999999987753221 1 3344567899999877776553 34 468999999999988755
Q ss_pred chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccC
Q 001023 656 NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQ 735 (1185)
Q Consensus 656 ~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr 735 (1185)
+...++++.+.+++++++|+|++++|+ |.+++|+++++|++|
T Consensus 407 g~~~~~~~~~~~~~~a~~G~r~l~va~--------------------------------------~~~~lG~i~l~D~~R 448 (675)
T TIGR01497 407 GGHIPTDLDQAVDQVARQGGTPLVVCE--------------------------------------DNRIYGVIYLKDIVK 448 (675)
T ss_pred CCCCcHHHHHHHHHHHhCCCeEEEEEE--------------------------------------CCEEEEEEEecccch
Confidence 444556778889999999999999996 568999999999999
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCccc
Q 001023 736 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSE 815 (1185)
Q Consensus 736 ~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1185)
+|++++|++|+++||+++|+|||+..||.++|+++|+.+
T Consensus 449 p~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----------------------------------------- 487 (675)
T TIGR01497 449 GGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----------------------------------------- 487 (675)
T ss_pred hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----------------------------------------
Confidence 999999999999999999999999999999999999932
Q ss_pred CCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhh
Q 001023 816 RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQ 895 (1185)
Q Consensus 816 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~ 895 (1185)
+++|++|+||..+|+.+|+ .|+.|+|+|||.||+|||+
T Consensus 488 -----------------------------------------v~a~~~PedK~~~v~~lq~-~g~~VamvGDG~NDapAL~ 525 (675)
T TIGR01497 488 -----------------------------------------FIAEATPEDKIALIRQEQA-EGKLVAMTGDGTNDAPALA 525 (675)
T ss_pred -----------------------------------------EEcCCCHHHHHHHHHHHHH-cCCeEEEECCCcchHHHHH
Confidence 8999999999999999998 8999999999999999999
Q ss_pred hcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhh
Q 001023 896 MADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTA 972 (1185)
Q Consensus 896 ~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~ 972 (1185)
+|||||++ +|++. |+++||+++.+.++ +..+ +.+||..+-....+..|++..++.-+|..+-..|...|.....
T Consensus 526 ~AdvGiAm~~gt~~--akeaadivLldd~~s~Iv~a-v~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (675)
T TIGR01497 526 QADVGVAMNSGTQA--AKEAANMVDLDSDPTKLIEV-VHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQA 602 (675)
T ss_pred hCCEeEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-HHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchhh
Confidence 99999999 55555 89999999998666 6666 8999999999999999999999987776655555544443333
Q ss_pred hhHH----------HHHHHHHH--hhhHHHHHhhhccccCChHHHhcCC-cccccc
Q 001023 973 INEW----------SSVLYSVI--YTSLPTIVVAILDKDLSRRTLLQNP-QLYGAG 1015 (1185)
Q Consensus 973 ~~~~----------~l~~~n~i--~t~lp~i~l~~~d~d~~~~~~~~~P-~ly~~~ 1015 (1185)
+|-+ .-+.||.+ .-.+|.-.-|+-.++.+...++++- -.|..|
T Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (675)
T TIGR01497 603 LNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYGLG 658 (675)
T ss_pred hccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhceEEecCC
Confidence 3221 22455532 2345555667777777777776653 456544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-70 Score=630.45 Aligned_cols=764 Identities=19% Similarity=0.243 Sum_probs=504.0
Q ss_pred cCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccc-hhhhHHHHHHHHHHHHHHHHHHHhh
Q 001023 91 FEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGV-SILPLAFVLSVTAIKDAYEDYRRHR 169 (1185)
Q Consensus 91 ~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~-~~~~l~~vi~~s~i~~~~ed~~r~k 169 (1185)
.+||+|......+++- +.+.|.-..|+..|..++..||+.- .+|+ .++.|++++.+ |+---++|.+
T Consensus 174 ~~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLD-----eyWYySlFtLfMli~f----E~tlV~Qrm~ 240 (1160)
T KOG0209|consen 174 HKYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLD-----EYWYYSLFTLFMLIAF----EATLVKQRMR 240 (1160)
T ss_pred HHhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhH-----HHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 4599999999988876 7777888889999999999999983 4444 44444444433 2233344444
Q ss_pred hhHH---hh--cceEEEEeCCeEEEEeeeccccccEEEEcC---CCccCCceeEeeccCCCCcEEEEeccCCCCCCceee
Q 001023 170 SDRI---EN--NRLANVLVNNQFQEKKWKDIRVGEIIKIKT---NETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1185)
Q Consensus 170 ~d~~---~n--~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~---ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K 241 (1185)
...+ +. +..+.|+|+++|+.+..+||.|||+|.|.. +..+|||++||. |.|.|||++|||||.|..|
T Consensus 241 ~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~-----GsciVnEaMLtGESvPl~K 315 (1160)
T KOG0209|consen 241 TLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLR-----GSCIVNEAMLTGESVPLMK 315 (1160)
T ss_pred HHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEe-----cceeechhhhcCCCccccc
Confidence 4333 32 567889999999999999999999999988 678999999999 6699999999999999999
Q ss_pred cccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeec-CCeEEEEEEEecccch---h
Q 001023 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN-TSWALGVAVYAGQETK---V 317 (1185)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n-t~~i~gvVv~tG~~Tk---i 317 (1185)
.+.+... ....+..+...++...|.||.++.-.+- .-++++. .+-+.+.|++||.+|. +
T Consensus 316 E~Ie~~~--------~d~~ld~~~d~k~hVlfGGTkivQht~p---------~~~slk~pDggc~a~VlrTGFeTSQGkL 378 (1160)
T KOG0209|consen 316 ESIELRD--------SDDILDIDRDDKLHVLFGGTKIVQHTPP---------KKASLKTPDGGCVAYVLRTGFETSQGKL 378 (1160)
T ss_pred cccccCC--------hhhhcccccccceEEEEcCceEEEecCC---------ccccccCCCCCeEEEEEeccccccCCce
Confidence 9876542 1112223334455566888877742100 0011221 2458999999999993 3
Q ss_pred hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhH
Q 001023 318 MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEI 397 (1185)
Q Consensus 318 ~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~ 397 (1185)
++-......+-+ .=|+...+++++++++|++.+ +++|.....+ +.+ +-
T Consensus 379 vRtilf~aervT----aNn~Etf~FILFLlVFAiaAa--~Yvwv~Gskd-----------------------~~R---sr 426 (1160)
T KOG0209|consen 379 VRTILFSAERVT----ANNRETFIFILFLLVFAIAAA--GYVWVEGSKD-----------------------PTR---SR 426 (1160)
T ss_pred eeeEEecceeee----eccHHHHHHHHHHHHHHHHhh--heEEEecccC-----------------------cch---hh
Confidence 222211111111 112334444455555555543 2334322211 100 01
Q ss_pred HHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeE
Q 001023 398 LFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 477 (1185)
Q Consensus 398 ~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~ 477 (1185)
..-|+-+..++...+|..||+-+.++.- +..+. + ++.++.|-.+=.+--.|+||..|||||||||+..|.
T Consensus 427 YKL~LeC~LIlTSVvPpELPmELSmAVN--sSL~A----L----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lv 496 (1160)
T KOG0209|consen 427 YKLFLECTLILTSVVPPELPMELSMAVN--SSLIA----L----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLV 496 (1160)
T ss_pred hheeeeeeEEEeccCCCCCchhhhHHHH--HHHHH----H----HHhceeecCccccccCCceeEEEecCCCccccccEE
Confidence 1146678888999999999987766533 33331 1 778889988989999999999999999999999999
Q ss_pred EEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcccccccc
Q 001023 478 FRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVV 557 (1185)
Q Consensus 478 ~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~ 557 (1185)
|..+- |..-. +.. ..+-.+.-.+-..++|.||+...+.
T Consensus 497 v~Gva--g~~~~-------------------------------~~~--------~~~~s~~p~~t~~vlAscHsLv~le- 534 (1160)
T KOG0209|consen 497 VEGVA--GLSAD-------------------------------EGA--------LTPASKAPNETVLVLASCHSLVLLE- 534 (1160)
T ss_pred EEecc--cccCC-------------------------------ccc--------ccchhhCCchHHHHHHHHHHHHHhc-
Confidence 98763 21100 000 0011112234567899999998732
Q ss_pred cCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCC----
Q 001023 558 DTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPD---- 633 (1185)
Q Consensus 558 ~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~---- 633 (1185)
++ -.++|.|.|.+++. |+.+...+ ......|... ..+|.+.+.|+|..|||||+++...
T Consensus 535 ---~~-------lVGDPlEKA~l~~v---~W~~~k~~---~v~p~~~~~~-~lkI~~ryhFsSaLKRmsvva~~~~~g~s 597 (1160)
T KOG0209|consen 535 ---DK-------LVGDPLEKATLEAV---GWNLEKKN---SVCPREGNGK-KLKIIQRYHFSSALKRMSVVASHQGPGSS 597 (1160)
T ss_pred ---Cc-------ccCChHHHHHHHhc---CcccccCc---ccCCCcCCCc-ccchhhhhhHHHHHHHHHhhhhcccCCCc
Confidence 11 34799999999865 44433211 1111222233 5778899999999999999987643
Q ss_pred CcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 001023 634 KTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRK 713 (1185)
Q Consensus 634 ~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 713 (1185)
-++++.+|||||+|.+++... +.++.+...+|+.+|.|||++|||.+.+--..+ .| +.
T Consensus 598 ~k~~~aVKGAPEvi~~ml~dv-----P~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q-------------~r----d~ 655 (1160)
T KOG0209|consen 598 EKYFVAVKGAPEVIQEMLRDV-----PKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQ-------------VR----DL 655 (1160)
T ss_pred eEEEEEecCCHHHHHHHHHhC-----chhHHHHHHHHhhccceEEEEecccccccchhh-------------hh----hh
Confidence 368999999999999998754 778888899999999999999999997321111 00 01
Q ss_pred HHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHH
Q 001023 714 VASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKS 793 (1185)
Q Consensus 714 ~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~ 793 (1185)
-.+.+|+||+|.|++.|..||+++++++|+.|++++.++.|+|||++.||.++|+++|+......++.+.....+. +
T Consensus 656 ~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~---~ 732 (1160)
T KOG0209|consen 656 KREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGN---Q 732 (1160)
T ss_pred hhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCc---e
Confidence 2378899999999999999999999999999999999999999999999999999999998765554444332110 0
Q ss_pred HHHH-HHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHH
Q 001023 794 LEDA-IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVAL 872 (1185)
Q Consensus 794 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~ 872 (1185)
..+. .++........+.... .....+.+.|+|..|+++...+ .+.++..+.. ||+|++|+||..++..
T Consensus 733 ~~w~s~d~t~~lp~~p~~~~~------~l~~~~dlcitG~~l~~l~~~~---~l~~l~~hv~--VfARvaP~QKE~ii~t 801 (1160)
T KOG0209|consen 733 LEWVSVDGTIVLPLKPGKKKT------LLAETHDLCITGSALDHLQATD---QLRRLIPHVW--VFARVAPKQKEFIITT 801 (1160)
T ss_pred eeEecCCCceeecCCCCccch------hhhhhhhhhcchhHHHHHhhhH---HHHHhhhhee--EEEeeChhhHHHHHHH
Confidence 0000 0000000000000000 1234578999999999888764 3444444444 9999999999999999
Q ss_pred HHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchh------------------------------------------
Q 001023 873 VKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGR------------------------------------------ 909 (1185)
Q Consensus 873 lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~------------------------------------------ 909 (1185)
+|+ .|+.|||||||.|||+||++|||||++ .+.+.+
T Consensus 802 lK~-~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 880 (1160)
T KOG0209|consen 802 LKK-LGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPH 880 (1160)
T ss_pred HHh-cCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChh
Confidence 999 999999999999999999999999998 443300
Q ss_pred ---------------------------HHhhcCceeec--chhhHHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHH
Q 001023 910 ---------------------------QAVMSSDFAMG--QFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 960 (1185)
Q Consensus 910 ---------------------------qA~~aSD~~i~--~f~~l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~ 960 (1185)
.|+.||.|.-. .-..+... +..||+..-..-+|. |-+++..+.-.
T Consensus 881 ~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~I-IrQGRctLVtTlQMf-----KILALN~LisA 954 (1160)
T KOG0209|consen 881 AEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHI-IRQGRCTLVTTLQMF-----KILALNCLISA 954 (1160)
T ss_pred HHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHH-HHhcchhHHHHHHHH-----HHHHHHHHHHH
Confidence 02233333321 12223333 789999887766553 33333333333
Q ss_pred HHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHHHHhhh
Q 001023 961 YVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVI 1040 (1185)
Q Consensus 961 ~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~vi 1040 (1185)
|.....+----=|.+.|.+..-++. .+.++.+....+-.. |-+..+...+||...+...+.+-..+...+
T Consensus 955 YslSvlyldGVKfgD~QaTisGlLl---a~cFlfISrskPLet-------LSkeRP~~nIFN~Y~i~svl~QFaVH~~tL 1024 (1160)
T KOG0209|consen 955 YSLSVLYLDGVKFGDTQATISGLLL---AACFLFISRSKPLET-------LSKERPLPNIFNVYIILSVLLQFAVHIATL 1024 (1160)
T ss_pred HHHHHhhhcCceecchhHhHHHHHH---HHHHhheecCCchhh-------HhhcCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 3322211111225566665544433 333443422222122 223334467999999988888888887777
Q ss_pred eee
Q 001023 1041 FFI 1043 (1185)
Q Consensus 1041 f~~ 1043 (1185)
+++
T Consensus 1025 vYi 1027 (1160)
T KOG0209|consen 1025 VYI 1027 (1160)
T ss_pred hhh
Confidence 766
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-67 Score=639.35 Aligned_cols=476 Identities=31% Similarity=0.430 Sum_probs=399.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCc
Q 001023 145 SILPLAFVLSVTAIKDAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGV 224 (1185)
Q Consensus 145 ~~~~l~~vi~~s~i~~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~ 224 (1185)
.+++++..++-...+...++..+...++..++++++|+|+| +++|++++|+|||+|.|++||.+|||++|++ |.
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~-----g~ 76 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS-----GS 76 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE-----cc
Confidence 34556666666666666777776666666889999999999 9999999999999999999999999999999 56
Q ss_pred EEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeE
Q 001023 225 AYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWA 304 (1185)
Q Consensus 225 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i 304 (1185)
|.||||+|||||.|+.|++++.. |+|+.+.+|. +
T Consensus 77 ~~vdes~LTGEs~pv~k~~g~~v-------------------------~~gs~~~~G~---------------------~ 110 (499)
T TIGR01494 77 CFVDESNLTGESVPVLKTAGDAV-------------------------FAGTYVFNGT---------------------L 110 (499)
T ss_pred EEEEcccccCCCCCeeeccCCcc-------------------------ccCcEEeccE---------------------E
Confidence 99999999999999999998877 8999999988 8
Q ss_pred EEEEEEecccch---hhhccCCCCCCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001023 305 LGVAVYAGQETK---VMLNSSGAPSKRSWLEMHMNSEI-IKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1185)
Q Consensus 305 ~gvVv~tG~~Tk---i~~n~~~~~~k~s~le~~~~~~~-~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~ 380 (1185)
.+.|..+|.+|. +..........+++++++.+++. .++++++++++++.++++.......
T Consensus 111 ~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~---------------- 174 (499)
T TIGR01494 111 IVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDP---------------- 174 (499)
T ss_pred EEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc----------------
Confidence 889999999984 33333444555789999999998 6777777777777666554321100
Q ss_pred CCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccce
Q 001023 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1185)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1185)
. .+...+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+||++
T Consensus 175 ----------~----~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~----------~~~gilvk~~~~lE~l~~v 230 (499)
T TIGR01494 175 ----------N----SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL----------AKKGIVVRSLNALEELGKV 230 (499)
T ss_pred ----------c----cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH----------HHCCcEEechhhhhhccCC
Confidence 0 124478899999999999999999999998886555 7789999999999999999
Q ss_pred eEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHH
Q 001023 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1185)
Q Consensus 461 d~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1185)
|++|||||||||+|+|+|.++.+.+.
T Consensus 231 ~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------------------ 256 (499)
T TIGR01494 231 DYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------------------ 256 (499)
T ss_pred cEEEeeCCCccccCceEEEEEEecCC------------------------------------------------------
Confidence 99999999999999999998864320
Q ss_pred HHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCC
Q 001023 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDS 620 (1185)
Q Consensus 541 ~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s 620 (1185)
++.++||+|.|++++++..+ +...||++
T Consensus 257 ---------------------------~~~s~hp~~~ai~~~~~~~~-------------------------~~~~~f~~ 284 (499)
T TIGR01494 257 ---------------------------EYLSGHPDERALVKSAKWKI-------------------------LNVFEFSS 284 (499)
T ss_pred ---------------------------CcCCCChHHHHHHHHhhhcC-------------------------cceeccCC
Confidence 01346999999999986411 13569999
Q ss_pred CCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001023 621 DRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAA 700 (1185)
Q Consensus 621 ~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a 700 (1185)
.+|+|+++++.+++ .|+||+++.|.++|.. +.+.+++++.+|+|++++|++
T Consensus 285 ~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~---------~~~~~~~~~~~g~~~~~~a~~----------------- 335 (499)
T TIGR01494 285 VRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD---------LEEKVKELAQSGLRVLAVASK----------------- 335 (499)
T ss_pred CCceEEEEEecCCc---EEEeCCHHHHHHhhHH---------HHHHHHHHHhCCCEEEEEEEC-----------------
Confidence 99999999987444 4789999999988752 233455678899999999973
Q ss_pred HhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEE
Q 001023 701 SNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQV 780 (1185)
Q Consensus 701 ~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~ 780 (1185)
-+++|+++++|++|++++++|+.|+++|+++||+|||+.+||..+|+++|+
T Consensus 336 ---------------------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------- 386 (499)
T TIGR01494 336 ---------------------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------- 386 (499)
T ss_pred ---------------------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------
Confidence 269999999999999999999999999999999999999999999999864
Q ss_pred EEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe
Q 001023 781 IINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR 860 (1185)
Q Consensus 781 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r 860 (1185)
+||
T Consensus 387 -----------------------------------------------------------------------------~~~ 389 (499)
T TIGR01494 387 -----------------------------------------------------------------------------FAR 389 (499)
T ss_pred -----------------------------------------------------------------------------eec
Confidence 477
Q ss_pred cCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhh-HHHHHHHHhhHHHHH
Q 001023 861 VAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF-LVTLLLVHGHWNYQR 939 (1185)
Q Consensus 861 ~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~-l~~lll~~Gr~~~~r 939 (1185)
++|+||+.+|+.+|+ .|+.|+|+|||+||++||++|||||++. |.++||+++.++++ ....++.+||+.+++
T Consensus 390 ~~p~~K~~~v~~l~~-~g~~v~~vGDg~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~ 462 (499)
T TIGR01494 390 VTPEEKAALVEALQK-KGRVVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFST 462 (499)
T ss_pred cCHHHHHHHHHHHHH-CCCEEEEECCChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHH
Confidence 899999999999998 8999999999999999999999999994 67889999998655 334458999999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHH
Q 001023 940 MGYMILYNFYRNAVLVFVLFW 960 (1185)
Q Consensus 940 i~~~i~~~~~~ni~~~~~~~~ 960 (1185)
+++++.|.+++|+++....++
T Consensus 463 i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 463 IKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997776665
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-65 Score=615.54 Aligned_cols=495 Identities=22% Similarity=0.253 Sum_probs=407.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhH------HhhcceEEEEe-CCeEEEEeeeccccccEEEEcCCCccCCceeEeecc
Q 001023 147 LPLAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTS 219 (1185)
Q Consensus 147 ~~l~~vi~~s~i~~~~ed~~r~k~d~------~~n~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss 219 (1185)
.--++++++..+.+++|++.+.|+.+ .+.++++++++ ||+.++|+.++|+|||+|.|++||+||+|+++++
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~-- 252 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS-- 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe--
Confidence 34457777888899999999888744 34478887776 5559999999999999999999999999999999
Q ss_pred CCCCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceee
Q 001023 220 DPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELK 299 (1185)
Q Consensus 220 ~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~ 299 (1185)
|...||||+|||||.|+.|.+++.+ |+||++.+|.
T Consensus 253 ---G~s~vDeS~iTGEs~PV~k~~Gd~V-------------------------~aGtiN~~G~----------------- 287 (713)
T COG2217 253 ---GSSSVDESMLTGESLPVEKKPGDEV-------------------------FAGTVNLDGS----------------- 287 (713)
T ss_pred ---CcEEeecchhhCCCCCEecCCCCEE-------------------------eeeEEECCcc-----------------
Confidence 7799999999999999999999999 9999999998
Q ss_pred cCCeEEEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccc
Q 001023 300 NTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRR 376 (1185)
Q Consensus 300 nt~~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~ 376 (1185)
+...|+.+|.|| ++....++++.+|+++|+..|++..++++..++++++++++|.+....
T Consensus 288 ----l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~------------- 350 (713)
T COG2217 288 ----LTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGG------------- 350 (713)
T ss_pred ----EEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC-------------
Confidence 999999999999 556777788999999999999999999999999999988866543310
Q ss_pred cCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccccc
Q 001023 377 KDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINED 456 (1185)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~ 456 (1185)
.+-..+.+++.++++.|||+|.+++|++.+...... +++|+++|+.+.+|.
T Consensus 351 -------------------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a----------A~~GILiK~g~~LE~ 401 (713)
T COG2217 351 -------------------DWETALYRALAVLVIACPCALGLATPTAILVGIGRA----------ARRGILIKGGEALER 401 (713)
T ss_pred -------------------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH----------HhCceEEeChHHHHh
Confidence 122378899999999999999999999988877665 899999999999999
Q ss_pred ccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccc
Q 001023 457 LGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEG 536 (1185)
Q Consensus 457 LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 536 (1185)
|+++|+|+||||||||+|+|++..+...+. . +++++.
T Consensus 402 l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~------------------------------e~~~L~----------- 438 (713)
T COG2217 402 LAKVDTVVFDKTGTLTEGKPEVTDVVALDG--D------------------------------EDELLA----------- 438 (713)
T ss_pred hccCCEEEEeCCCCCcCCceEEEEEecCCC--C------------------------------HHHHHH-----------
Confidence 999999999999999999999998864321 0 222222
Q ss_pred hhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEee
Q 001023 537 KHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLH 616 (1185)
Q Consensus 537 ~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~ 616 (1185)
+|.+ .+-.++||...|++++|++.|..-.. .+ ..+
T Consensus 439 ---------laAa-----------------lE~~S~HPiA~AIv~~a~~~~~~~~~----------------~~---~~i 473 (713)
T COG2217 439 ---------LAAA-----------------LEQHSEHPLAKAIVKAAAERGLPDVE----------------DF---EEI 473 (713)
T ss_pred ---------HHHH-----------------HHhcCCChHHHHHHHHHHhcCCCCcc----------------ce---eee
Confidence 2211 12256899999999999887621111 00 001
Q ss_pred cCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHH
Q 001023 617 EFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSS 696 (1185)
Q Consensus 617 ~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~ 696 (1185)
| .+.+...+ .+..+.+ |.+..+.+.- .+... .....+.+..+|..++.++.
T Consensus 474 ~----G~Gv~~~v--~g~~v~v---G~~~~~~~~~-----~~~~~-~~~~~~~~~~~G~t~v~va~-------------- 524 (713)
T COG2217 474 P----GRGVEAEV--DGERVLV---GNARLLGEEG-----IDLPL-LSERIEALESEGKTVVFVAV-------------- 524 (713)
T ss_pred c----cCcEEEEE--CCEEEEE---cCHHHHhhcC-----CCccc-hhhhHHHHHhcCCeEEEEEE--------------
Confidence 1 12222222 1223344 8887775421 11111 45667788889999888886
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCC
Q 001023 697 FEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK 776 (1185)
Q Consensus 697 ~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~ 776 (1185)
|.+++|+++++|++|++++++|++||+.||++.|||||+..+|.+||+++||.+
T Consensus 525 ------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-- 578 (713)
T COG2217 525 ------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-- 578 (713)
T ss_pred ------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh--
Confidence 679999999999999999999999999999999999999999999999999932
Q ss_pred ceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCee
Q 001023 777 MTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV 856 (1185)
Q Consensus 777 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v 856 (1185)
T Consensus 579 -------------------------------------------------------------------------------- 578 (713)
T COG2217 579 -------------------------------------------------------------------------------- 578 (713)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHh
Q 001023 857 LCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHG 933 (1185)
Q Consensus 857 i~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~G 933 (1185)
+.+.+.|+||+++|+.+|+ .|++|+|||||+||+|+|.+|||||+| +|++. |.++||+++++.+. +..+ +..+
T Consensus 579 v~AellPedK~~~V~~l~~-~g~~VamVGDGINDAPALA~AdVGiAmG~GtDv--A~eaADvvL~~~dL~~v~~a-i~ls 654 (713)
T COG2217 579 VRAELLPEDKAEIVRELQA-EGRKVAMVGDGINDAPALAAADVGIAMGSGTDV--AIEAADVVLMRDDLSAVPEA-IDLS 654 (713)
T ss_pred heccCCcHHHHHHHHHHHh-cCCEEEEEeCCchhHHHHhhcCeeEeecCCcHH--HHHhCCEEEecCCHHHHHHH-HHHH
Confidence 8999999999999999998 899999999999999999999999999 67887 99999999998665 5555 8999
Q ss_pred hHHHHHhhhhhhhhhhhhHHHHHHHHHH
Q 001023 934 HWNYQRMGYMILYNFYRNAVLVFVLFWY 961 (1185)
Q Consensus 934 r~~~~ri~~~i~~~~~~ni~~~~~~~~~ 961 (1185)
|..++++++++.|.|.+|.+++.+..+.
T Consensus 655 r~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 655 RATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887766553
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-66 Score=585.77 Aligned_cols=605 Identities=18% Similarity=0.179 Sum_probs=462.9
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccccc----CccchhhhHHHHHHHHHHHH
Q 001023 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF----GRGVSILPLAFVLSVTAIKD 160 (1185)
Q Consensus 85 ~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~----~~~~~~~~l~~vi~~s~i~~ 160 (1185)
+.++|++.||.|+....|-+.+ +.++--|..|..|..-.++++... ++.- ..|..+.-++.+++++....
T Consensus 41 E~~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~--Lang~~~~~DW~DF~gI~~LLliNsti~ 114 (942)
T KOG0205|consen 41 EVEERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIG--LANGGGRPPDWQDFVGICCLLLINSTIS 114 (942)
T ss_pred HHHHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHH--HhcCCCCCcchhhhhhhheeeeecceee
Confidence 4455899999999999998887 566677788888888888888765 3211 24566666777788888889
Q ss_pred HHHHHHHhhhhHHhh---cceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCC
Q 001023 161 AYEDYRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESN 237 (1185)
Q Consensus 161 ~~ed~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~ 237 (1185)
++|+++.-..-.++. ..+++|+|||+|.+++.+.|+||||+.++.|+.+|||++||...- +.||+|.|||||-
T Consensus 115 FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~----LkiDQSAlTGESL 190 (942)
T KOG0205|consen 115 FIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDP----LKIDQSALTGESL 190 (942)
T ss_pred eeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCCc----cccchhhhcCCcc
Confidence 999998877644433 578999999999999999999999999999999999999999663 8999999999999
Q ss_pred ceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchh
Q 001023 238 LKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1185)
Q Consensus 238 ~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki 317 (1185)
|+.|.+++++ |+|+.+-.|+ +.+||++||..|-.
T Consensus 191 pvtKh~gd~v-------------------------fSgSTcKqGE---------------------~eaVViATg~~TF~ 224 (942)
T KOG0205|consen 191 PVTKHPGDEV-------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFF 224 (942)
T ss_pred ccccCCCCce-------------------------ecccccccce---------------------EEEEEEEeccceee
Confidence 9999999999 9999999888 99999999999954
Q ss_pred hh---ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccch
Q 001023 318 ML---NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWG 394 (1185)
Q Consensus 318 ~~---n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~ 394 (1185)
.+ .... ..+..++++-++.+..++.+.+.+--++..++.+..+.+...
T Consensus 225 GkAA~LVds-t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r---------------------------- 275 (942)
T KOG0205|consen 225 GKAAHLVDS-TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYR---------------------------- 275 (942)
T ss_pred hhhHHhhcC-CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhh----------------------------
Confidence 32 2222 455689999999988877554433222222222222211100
Q ss_pred hhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccc
Q 001023 395 LEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTEN 474 (1185)
Q Consensus 395 ~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n 474 (1185)
...-+-+++++--||++||..+.....+++.++ ++++++++...++|+|+.+|++|||||||||.|
T Consensus 276 ----~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL----------aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlN 341 (942)
T KOG0205|consen 276 ----DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 341 (942)
T ss_pred ----hhhhheheeeecccccccceeeeehhhHHHHHH----------HhcccHHHHHHHHHHhhCceEEeecCcCceeec
Confidence 022233455555699999998888888888877 789999999999999999999999999999999
Q ss_pred eeEEEE----EEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhc
Q 001023 475 KMEFRC----ASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACN 550 (1185)
Q Consensus 475 ~m~~~~----~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Ch 550 (1185)
++.+.+ +...|. +++ +.++ ..|-
T Consensus 342 kLSvdknl~ev~v~gv---------------------------------~~D------------------~~~L--~A~r 368 (942)
T KOG0205|consen 342 KLSVDKNLIEVFVKGV---------------------------------DKD------------------DVLL--TAAR 368 (942)
T ss_pred ceecCcCcceeeecCC---------------------------------ChH------------------HHHH--HHHH
Confidence 998865 222221 111 1111 1121
Q ss_pred ccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEe
Q 001023 551 TIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILG 630 (1185)
Q Consensus 551 t~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~ 630 (1185)
.... ++.+..|.|++...++- ...+. .|+.++.+|||+..||....+.
T Consensus 369 Asr~---------------en~DAID~A~v~~L~dP----------------Keara-~ikevhF~PFnPV~Krta~ty~ 416 (942)
T KOG0205|consen 369 ASRK---------------ENQDAIDAAIVGMLADP----------------KEARA-GIKEVHFLPFNPVDKRTALTYI 416 (942)
T ss_pred Hhhh---------------cChhhHHHHHHHhhcCH----------------HHHhh-CceEEeeccCCccccceEEEEE
Confidence 1122 23467888888876531 01123 8999999999999999999999
Q ss_pred cCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHH
Q 001023 631 LPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAAL 710 (1185)
Q Consensus 631 ~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~ 710 (1185)
++||+....+||||+.|++.|+.. .+.++...+.+++|++.|+|.|++|++..++..-
T Consensus 417 d~dG~~~r~sKGAPeqil~l~~~~--~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~-------------------- 474 (942)
T KOG0205|consen 417 DPDGNWHRVSKGAPEQILKLCNED--HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK-------------------- 474 (942)
T ss_pred CCCCCEEEecCCChHHHHHHhhcc--CcchHHHHHHHHHHHHhcchhhhhhhhccccccc--------------------
Confidence 999999999999999999999865 5789999999999999999999999988765420
Q ss_pred HHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHH
Q 001023 711 LRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESC 790 (1185)
Q Consensus 711 ~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~ 790 (1185)
+.-....+++|..-+-||+|.+..++|..-...|..|.|+|||...-|...++.+|+-++-.+
T Consensus 475 -----~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyp------------ 537 (942)
T KOG0205|consen 475 -----ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP------------ 537 (942)
T ss_pred -----cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCC------------
Confidence 122346789999999999999999999999999999999999999999999999998542110
Q ss_pred HHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHH
Q 001023 791 RKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIV 870 (1185)
Q Consensus 791 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV 870 (1185)
+.+.+.... .. -+.|.. ..+++..++ -|+.+.|+||..+|
T Consensus 538 ------------------ss~llG~~~-----~~---~~~~~~------------v~elie~ad--gfAgVfpehKy~iV 577 (942)
T KOG0205|consen 538 ------------------SSALLGLGK-----DG---SMPGSP------------VDELIEKAD--GFAGVFPEHKYEIV 577 (942)
T ss_pred ------------------chhhccCCC-----CC---CCCCCc------------HHHHhhhcc--CccccCHHHHHHHH
Confidence 000000000 00 011111 112222333 79999999999999
Q ss_pred HHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhh
Q 001023 871 ALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNF 948 (1185)
Q Consensus 871 ~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~ 948 (1185)
+.+|+ .|+.++|+|||+||+|+|+.||+||++.+.... |..+||+++..-.. +... +..+|.+|+|++.+..|.+
T Consensus 578 ~~Lq~-r~hi~gmtgdgvndapaLKkAdigiava~atda-ar~asdiVltepglSviI~a-vltSraIfqrmknytiyav 654 (942)
T KOG0205|consen 578 KILQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA-ARSASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAV 654 (942)
T ss_pred HHHhh-cCceecccCCCcccchhhcccccceeeccchhh-hcccccEEEcCCCchhhHHH-HHHHHHHHHHHhhheeeee
Confidence 99999 899999999999999999999999999666553 78899999988555 3333 7799999999999999888
Q ss_pred hhhHHHH
Q 001023 949 YRNAVLV 955 (1185)
Q Consensus 949 ~~ni~~~ 955 (1185)
.-.+-++
T Consensus 655 sitiriv 661 (942)
T KOG0205|consen 655 SITIRIV 661 (942)
T ss_pred hhHHHHH
Confidence 7666444
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-61 Score=599.71 Aligned_cols=486 Identities=21% Similarity=0.218 Sum_probs=392.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHH------hhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCC
Q 001023 150 AFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTG 223 (1185)
Q Consensus 150 ~~vi~~s~i~~~~ed~~r~k~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G 223 (1185)
++++++..+.+++|.+.++|+.+. +.+.+++|+|||++++++.++|+|||+|.|++||.||||++|++ |
T Consensus 210 ~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~-----g 284 (741)
T PRK11033 210 AMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS-----P 284 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-----C
Confidence 456667777888888888777543 34678999999999999999999999999999999999999999 6
Q ss_pred cEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCe
Q 001023 224 VAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303 (1185)
Q Consensus 224 ~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~ 303 (1185)
.+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 285 ~~~vdes~lTGEs~Pv~k~~Gd~V-------------------------~aGt~~~~G~--------------------- 318 (741)
T PRK11033 285 FASFDESALTGESIPVERATGEKV-------------------------PAGATSVDRL--------------------- 318 (741)
T ss_pred cEEeecccccCCCCCEecCCCCee-------------------------ccCCEEcCce---------------------
Confidence 699999999999999999999888 9999999998
Q ss_pred EEEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001023 304 ALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1185)
Q Consensus 304 i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~ 380 (1185)
+.+.|+.+|.+| ++.+...++..+++++|+.+|++..++.+++++++++.++++.++... +|
T Consensus 319 ~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~--------~~------- 383 (741)
T PRK11033 319 VTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAA--------PW------- 383 (741)
T ss_pred EEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------CH-------
Confidence 999999999999 455666677788999999999999999999999999988876432210 11
Q ss_pred CCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccce
Q 001023 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1185)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1185)
...+.+++.+++..|||+|.++++++........ +++++++|+.+.+|.|++|
T Consensus 384 -----------------~~~i~~a~svlviacPcaL~latP~a~~~~l~~a----------ar~gilik~~~alE~l~~v 436 (741)
T PRK11033 384 -----------------QEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA----------ARRGALIKGGAALEQLGRV 436 (741)
T ss_pred -----------------HHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH----------HHCCeEEcCcHHHHHhhCC
Confidence 1246778899999999999999988877655544 7889999999999999999
Q ss_pred eEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHH
Q 001023 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1185)
Q Consensus 461 d~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1185)
|+||||||||||+|+|++.++...+. +. ++
T Consensus 437 ~~v~fDKTGTLT~g~~~v~~~~~~~~-~~------------------------------~~------------------- 466 (741)
T PRK11033 437 TTVAFDKTGTLTEGKPQVTDIHPATG-IS------------------------------ES------------------- 466 (741)
T ss_pred CEEEEeCCCCCcCCceEEEEEEecCC-CC------------------------------HH-------------------
Confidence 99999999999999999998753210 00 11
Q ss_pred HHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCC
Q 001023 541 DFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDS 620 (1185)
Q Consensus 541 ~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s 620 (1185)
+++...+. +. ..+.||.+.|+++++++.|.. +||.+
T Consensus 467 ~~l~~aa~---~e---------------~~s~hPia~Ai~~~a~~~~~~--------------------------~~~~~ 502 (741)
T PRK11033 467 ELLALAAA---VE---------------QGSTHPLAQAIVREAQVRGLA--------------------------IPEAE 502 (741)
T ss_pred HHHHHHHH---Hh---------------cCCCCHHHHHHHHHHHhcCCC--------------------------CCCCc
Confidence 22222221 11 134699999999999875542 34555
Q ss_pred CCceEEE-EEe-cCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001023 621 DRKRMSV-ILG-LPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 698 (1185)
Q Consensus 621 ~rkrmsv-iv~-~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~ 698 (1185)
+++.+.- -++ .-+|+.+. -|+++.+.+. .+.....++++..+|.|++++|+
T Consensus 503 ~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~~---------~~~~~~~~~~~~~~g~~~v~va~---------------- 555 (741)
T PRK11033 503 SQRALAGSGIEGQVNGERVL--ICAPGKLPPL---------ADAFAGQINELESAGKTVVLVLR---------------- 555 (741)
T ss_pred ceEEEeeEEEEEEECCEEEE--Eecchhhhhc---------cHHHHHHHHHHHhCCCEEEEEEE----------------
Confidence 5555421 111 12343222 3888877541 12344456788899999999996
Q ss_pred HHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCce
Q 001023 699 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 778 (1185)
Q Consensus 699 ~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~ 778 (1185)
|.+++|+++++|++|+|++++|+.|+++|++++|+|||+..+|..+|.++||.
T Consensus 556 ----------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----- 608 (741)
T PRK11033 556 ----------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----- 608 (741)
T ss_pred ----------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----
Confidence 67899999999999999999999999999999999999999999999999982
Q ss_pred EEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEE
Q 001023 779 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 858 (1185)
Q Consensus 779 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~ 858 (1185)
..
T Consensus 609 ------------------------------------------------------------------------------~~ 610 (741)
T PRK11033 609 ------------------------------------------------------------------------------FR 610 (741)
T ss_pred ------------------------------------------------------------------------------ee
Confidence 44
Q ss_pred EecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhH
Q 001023 859 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHW 935 (1185)
Q Consensus 859 ~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~ 935 (1185)
++++|+||..+|+.+|+ . +.|+|+|||.||++||++|||||++ +|.+. |.++||+++.+.++ +..+ +..||.
T Consensus 611 ~~~~p~~K~~~v~~l~~-~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~--a~~~adivl~~~~l~~l~~~-i~~sr~ 685 (741)
T PRK11033 611 AGLLPEDKVKAVTELNQ-H-APLAMVGDGINDAPAMKAASIGIAMGSGTDV--ALETADAALTHNRLRGLAQM-IELSRA 685 (741)
T ss_pred cCCCHHHHHHHHHHHhc-C-CCEEEEECCHHhHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHHH-HHHHHH
Confidence 56789999999999986 3 5899999999999999999999999 45555 88999999987555 5544 899999
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHHH
Q 001023 936 NYQRMGYMILYNFYRNAVLVFVLF 959 (1185)
Q Consensus 936 ~~~ri~~~i~~~~~~ni~~~~~~~ 959 (1185)
.++++++++.|.+.+|+++..+.+
T Consensus 686 ~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 686 THANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987665544
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-61 Score=572.55 Aligned_cols=510 Identities=19% Similarity=0.199 Sum_probs=410.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhH------HhhcceEEEEeCCe-EEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCc
Q 001023 152 VLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVNNQ-FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGV 224 (1185)
Q Consensus 152 vi~~s~i~~~~ed~~r~k~d~------~~n~~~~~V~r~g~-~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~ 224 (1185)
++.+.++.+++|...++|+-. .+.+.++.++.+|+ .++|+.+.|++||+|+|.+|+.||+||++++ |.
T Consensus 347 Li~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~-----Gs 421 (951)
T KOG0207|consen 347 LITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVD-----GS 421 (951)
T ss_pred HHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEe-----Cc
Confidence 444667788999999988743 44578899999886 8999999999999999999999999999999 77
Q ss_pred EEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeE
Q 001023 225 AYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWA 304 (1185)
Q Consensus 225 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i 304 (1185)
++||||.+|||+.|+.|++++.+ .+|+++.+|. .
T Consensus 422 s~VDEs~iTGEs~PV~Kk~gs~V-------------------------iaGsiN~nG~---------------------l 455 (951)
T KOG0207|consen 422 SEVDESLITGESMPVPKKKGSTV-------------------------IAGSINLNGT---------------------L 455 (951)
T ss_pred eeechhhccCCceecccCCCCee-------------------------eeeeecCCce---------------------E
Confidence 99999999999999999999988 8999999988 8
Q ss_pred EEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCC
Q 001023 305 LGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSE 381 (1185)
Q Consensus 305 ~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~ 381 (1185)
+.-++.+|.|| ++.+..++++..++|+|+..|++..++.++++++++.++++|.+..... .||
T Consensus 456 ~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~-------~~~------- 521 (951)
T KOG0207|consen 456 LVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIV-------FKY------- 521 (951)
T ss_pred EEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHcccc-------ccC-------
Confidence 99999999999 5577778899999999999999999999999999999999988865432 111
Q ss_pred CCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccccccccee
Q 001023 382 EGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIK 461 (1185)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd 461 (1185)
+..+...+...|..++.+++.+|||+|.++.|.+.+.+...- +.+|+++|..+.+|.+.+|+
T Consensus 522 --------~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg----------A~nGvLIKGge~LE~~hkv~ 583 (951)
T KOG0207|consen 522 --------PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG----------ATNGVLIKGGEALEKAHKVK 583 (951)
T ss_pred --------cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh----------hhcceEEcCcHHHHHHhcCC
Confidence 111234556788899999999999999999998766554433 78999999999999999999
Q ss_pred EEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHH
Q 001023 462 YVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYD 541 (1185)
Q Consensus 462 ~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~ 541 (1185)
+|+||||||||+|++.+.++.+-+.. -..++
T Consensus 584 tVvFDKTGTLT~G~~~V~~~~~~~~~-------------------------------------------------~~~~e 614 (951)
T KOG0207|consen 584 TVVFDKTGTLTEGKPTVVDFKSLSNP-------------------------------------------------ISLKE 614 (951)
T ss_pred EEEEcCCCceecceEEEEEEEecCCc-------------------------------------------------ccHHH
Confidence 99999999999999999988754321 01123
Q ss_pred HHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCC
Q 001023 542 FFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSD 621 (1185)
Q Consensus 542 ~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~ 621 (1185)
++...+.- . -.++||...|++.+|++.+-.. + .-.++..-.|...
T Consensus 615 ~l~~v~a~---E---------------s~SeHPig~AIv~yak~~~~~~-----~------------~~~~~~~~~~pg~ 659 (951)
T KOG0207|consen 615 ALALVAAM---E---------------SGSEHPIGKAIVDYAKEKLVEP-----N------------PEGVLSFEYFPGE 659 (951)
T ss_pred HHHHHHHH---h---------------cCCcCchHHHHHHHHHhccccc-----C------------ccccceeecccCC
Confidence 33322221 1 1357999999999999876110 0 1112222233333
Q ss_pred CceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHH
Q 001023 622 RKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAAS 701 (1185)
Q Consensus 622 rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~ 701 (1185)
.+...+.+. ..++.+ |.-+.|... +-...+++...+++-...|..+.+++.
T Consensus 660 g~~~~~~~~--~~~i~i---GN~~~~~r~-----~~~~~~~i~~~~~~~e~~g~tvv~v~v------------------- 710 (951)
T KOG0207|consen 660 GIYVTVTVD--GNEVLI---GNKEWMSRN-----GCSIPDDILDALTESERKGQTVVYVAV------------------- 710 (951)
T ss_pred CcccceEEe--eeEEee---chHHHHHhc-----CCCCchhHHHhhhhHhhcCceEEEEEE-------------------
Confidence 322222222 222333 766555432 223455577778888889999999997
Q ss_pred hhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEE
Q 001023 702 NALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI 781 (1185)
Q Consensus 702 ~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~ 781 (1185)
|-++.|+++++|++|+|+..+|+.||+.||++.||||||..||.++|+++|+-+
T Consensus 711 -------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------- 764 (951)
T KOG0207|consen 711 -------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------- 764 (951)
T ss_pred -------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-------
Confidence 889999999999999999999999999999999999999999999999999521
Q ss_pred EeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEec
Q 001023 782 INSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV 861 (1185)
Q Consensus 782 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~ 861 (1185)
|+|.+
T Consensus 765 ---------------------------------------------------------------------------V~aev 769 (951)
T KOG0207|consen 765 ---------------------------------------------------------------------------VYAEV 769 (951)
T ss_pred ---------------------------------------------------------------------------EEecc
Confidence 99999
Q ss_pred CcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhhHHHH-HHHHhhHHHHH
Q 001023 862 APLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRFLVTL-LLVHGHWNYQR 939 (1185)
Q Consensus 862 sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~l~~l-ll~~Gr~~~~r 939 (1185)
.|+||+++|+.+|+ .++.|+|+|||+||+|||.+|||||+| .|++. |.++||++++..+...-. .+..+|+..+|
T Consensus 770 ~P~~K~~~Ik~lq~-~~~~VaMVGDGINDaPALA~AdVGIaig~gs~v--AieaADIVLmrn~L~~v~~ai~LSrkt~~r 846 (951)
T KOG0207|consen 770 LPEQKAEKIKEIQK-NGGPVAMVGDGINDAPALAQADVGIAIGAGSDV--AIEAADIVLMRNDLRDVPFAIDLSRKTVKR 846 (951)
T ss_pred CchhhHHHHHHHHh-cCCcEEEEeCCCCccHHHHhhccceeeccccHH--HHhhCCEEEEccchhhhHHHHHHHHHHHhh
Confidence 99999999999999 889999999999999999999999999 56666 999999999886553222 27889999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHH
Q 001023 940 MGYMILYNFYRNAVLVFVLFWY 961 (1185)
Q Consensus 940 i~~~i~~~~~~ni~~~~~~~~~ 961 (1185)
++.++.|++.+|++.+.+....
T Consensus 847 Ik~N~~~A~~yn~~~IpIAagv 868 (951)
T KOG0207|consen 847 IKLNFVWALIYNLVGIPIAAGV 868 (951)
T ss_pred HHHHHHHHHHHHHhhhhhheec
Confidence 9999999999999876665443
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-59 Score=573.70 Aligned_cols=499 Identities=20% Similarity=0.216 Sum_probs=389.4
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHhhhhHH------hhcceEEEEeCC-eEEEEeeeccccccEEEEcCCCccCCce
Q 001023 141 GRGVSILPLAFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNN-QFQEKKWKDIRVGEIIKIKTNETIPCDM 213 (1185)
Q Consensus 141 ~~~~~~~~l~~vi~~s~i~~~~ed~~r~k~d~~------~n~~~~~V~r~g-~~~~i~~~~l~vGDIV~l~~ge~iPaD~ 213 (1185)
+.|..+..+++ +..+.++++.+.++|+.+. .++.+++|+|+| +++++++++|+|||+|.|++||.+|||+
T Consensus 16 ~~~~~~~~i~~---~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg 92 (556)
T TIGR01525 16 GLVLEGALLLF---LFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDG 92 (556)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccce
Confidence 44455554444 4444455555555555443 335789999995 9999999999999999999999999999
Q ss_pred eEeeccCCCCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEe
Q 001023 214 VLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILL 293 (1185)
Q Consensus 214 ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~ 293 (1185)
+|++ |.+.||||.|||||.|+.|.+++.. |+||.+.+|.
T Consensus 93 ~vi~-----g~~~vdes~lTGEs~pv~k~~g~~v-------------------------~aGt~v~~g~----------- 131 (556)
T TIGR01525 93 VVIS-----GESEVDESALTGESMPVEKKEGDEV-------------------------FAGTINGDGS----------- 131 (556)
T ss_pred EEEe-----cceEEeehhccCCCCCEecCCcCEE-------------------------eeceEECCce-----------
Confidence 9999 6699999999999999999998877 9999999888
Q ss_pred ecceeecCCeEEEEEEEecccchh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccc
Q 001023 294 RGCELKNTSWALGVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDY 370 (1185)
Q Consensus 294 rgs~l~nt~~i~gvVv~tG~~Tki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~ 370 (1185)
++++|+.||.+|.+ ......++.+++++++.++++..++.++.++++++.++++.+....
T Consensus 132 ----------~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~------- 194 (556)
T TIGR01525 132 ----------LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGAL------- 194 (556)
T ss_pred ----------EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-------
Confidence 99999999999954 3444455667899999999999999999988888887776432100
Q ss_pred cccccccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeecc
Q 001023 371 MPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRA 450 (1185)
Q Consensus 371 ~~wyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~ 450 (1185)
..+..++.+++..|||+|+++++++.......+ .++++++|+
T Consensus 195 ----------------------------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~----------~~~gilvk~ 236 (556)
T TIGR01525 195 ----------------------------GALYRALAVLVVACPCALGLATPVAILVAIGVA----------ARRGILIKG 236 (556)
T ss_pred ----------------------------hHHHHHHHHHhhccccchhehhHHHHHHHHHHH----------HHCCceecC
Confidence 267889999999999999999999988877666 789999999
Q ss_pred CcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcC
Q 001023 451 LNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSG 530 (1185)
Q Consensus 451 ~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 530 (1185)
++.+|.||++|++|||||||||+|+|++.++...+.. +
T Consensus 237 ~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------------~---------- 274 (556)
T TIGR01525 237 GDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA--------------------------------S---------- 274 (556)
T ss_pred chHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC--------------------------------C----------
Confidence 9999999999999999999999999999988643211 0
Q ss_pred CCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeE
Q 001023 531 KNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRF 610 (1185)
Q Consensus 531 ~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~ 610 (1185)
....+++. +|..+.. .+.||.+.|+++++++.|..... +. .. .
T Consensus 275 ------~~~~~~l~---~a~~~e~---------------~~~hp~~~Ai~~~~~~~~~~~~~--~~---------~~-~- 317 (556)
T TIGR01525 275 ------ISEEELLA---LAAALEQ---------------SSSHPLARAIVRYAKKRGLELPK--QE---------DV-E- 317 (556)
T ss_pred ------ccHHHHHH---HHHHHhc---------------cCCChHHHHHHHHHHhcCCCccc--cc---------Ce-e-
Confidence 00112222 2322222 24699999999999987653211 00 00 0
Q ss_pred EEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHH
Q 001023 611 NVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEF 690 (1185)
Q Consensus 611 ~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~ 690 (1185)
+. ..++++..++ |. ..+..|+++.+. . +.....+....+++++.+|+|++.++.
T Consensus 318 ------~~--~~~gi~~~~~---g~-~~~~lg~~~~~~-----~-~~~~~~~~~~~~~~~~~~g~~~~~v~~-------- 371 (556)
T TIGR01525 318 ------EV--PGKGVEATVD---GQ-EEVRIGNPRLLE-----L-AAEPISASPDLLNEGESQGKTVVFVAV-------- 371 (556)
T ss_pred ------Ee--cCCeEEEEEC---Ce-eEEEEecHHHHh-----h-cCCCchhhHHHHHHHhhCCcEEEEEEE--------
Confidence 00 1223333332 21 122337776551 1 111122334567788899999999985
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHH
Q 001023 691 EQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYS 769 (1185)
Q Consensus 691 ~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aG-Ikv~mLTGD~~eTAi~Ia~~ 769 (1185)
|.+++|.+.++|+++||++++|+.|+++| ++++|+|||+..+|..++++
T Consensus 372 ------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~ 421 (556)
T TIGR01525 372 ------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAE 421 (556)
T ss_pred ------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHH
Confidence 67899999999999999999999999999 99999999999999999999
Q ss_pred cCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHH
Q 001023 770 SKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQL 849 (1185)
Q Consensus 770 ~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l 849 (1185)
+|+..
T Consensus 422 lgi~~--------------------------------------------------------------------------- 426 (556)
T TIGR01525 422 LGIDE--------------------------------------------------------------------------- 426 (556)
T ss_pred hCCCe---------------------------------------------------------------------------
Confidence 99931
Q ss_pred hccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecch--hhHH
Q 001023 850 AGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQF--RFLV 926 (1185)
Q Consensus 850 ~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f--~~l~ 926 (1185)
+++++.|++|..+++.++. .++.|+|+|||.||++|+++|||||++. +.+. +..+||+++.+. .-+.
T Consensus 427 -------~f~~~~p~~K~~~v~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~--~~~~Ad~vi~~~~~~~l~ 496 (556)
T TIGR01525 427 -------VHAELLPEDKLAIVKELQE-EGGVVAMVGDGINDAPALAAADVGIAMGAGSDV--AIEAADIVLLNDDLSSLP 496 (556)
T ss_pred -------eeccCCHHHHHHHHHHHHH-cCCEEEEEECChhHHHHHhhCCEeEEeCCCCHH--HHHhCCEEEeCCCHHHHH
Confidence 7888999999999999998 7889999999999999999999999985 3333 778999999864 4466
Q ss_pred HHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHH
Q 001023 927 TLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLF 959 (1185)
Q Consensus 927 ~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~ 959 (1185)
.+ +..||..++++++++.|.+.+|++.+...+
T Consensus 497 ~~-i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 497 TA-IDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 899999999999999999999998865544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-58 Score=561.60 Aligned_cols=480 Identities=19% Similarity=0.252 Sum_probs=383.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhH------HhhcceEEEEeC-CeEEEEeeeccccccEEEEcCCCccCCceeEeeccC
Q 001023 148 PLAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVN-NQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSD 220 (1185)
Q Consensus 148 ~l~~vi~~s~i~~~~ed~~r~k~d~------~~n~~~~~V~r~-g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~ 220 (1185)
...+++++..+.+++|++.++|+.+ ...+.+++|+|+ |.+++|+.++|+|||+|.|++||.||||+++++
T Consensus 56 ~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~--- 132 (562)
T TIGR01511 56 ASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE--- 132 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE---
Confidence 3345566666778888887766644 334678899885 677999999999999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeec
Q 001023 221 PTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300 (1185)
Q Consensus 221 ~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~n 300 (1185)
|.+.||||.|||||.|+.|++++.. |+||++.+|.
T Consensus 133 --g~~~vdes~lTGEs~pv~k~~gd~V-------------------------~aGt~~~~g~------------------ 167 (562)
T TIGR01511 133 --GESEVDESLVTGESLPVPKKVGDPV-------------------------IAGTVNGTGS------------------ 167 (562)
T ss_pred --CceEEehHhhcCCCCcEEcCCCCEE-------------------------EeeeEECCce------------------
Confidence 6699999999999999999999988 9999999998
Q ss_pred CCeEEEEEEEecccch---hhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccccccccc
Q 001023 301 TSWALGVAVYAGQETK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRK 377 (1185)
Q Consensus 301 t~~i~gvVv~tG~~Tk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~ 377 (1185)
+++.|+.||.+|. +.+...+++.+++++++.+|++..++++++++++++.+++|.
T Consensus 168 ---~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------- 225 (562)
T TIGR01511 168 ---LVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------- 225 (562)
T ss_pred ---EEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 9999999999994 455556677788999999999999999988888877766542
Q ss_pred CCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccc
Q 001023 378 DFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDL 457 (1185)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~L 457 (1185)
..+.+++.+++..|||+|+++++++.+.....+ +++++++|+++.+|.|
T Consensus 226 ---------------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a----------a~~gIlik~~~~lE~l 274 (562)
T TIGR01511 226 ---------------------FALEFAVTVLIIACPCALGLATPTVIAVATGLA----------AKNGVLIKDGDALERA 274 (562)
T ss_pred ---------------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH----------HHCCeEEcChHHHHHh
Confidence 157788999999999999999999988877655 7899999999999999
Q ss_pred cceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccch
Q 001023 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGK 537 (1185)
Q Consensus 458 G~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 537 (1185)
+++|+||||||||||+|+|++.++...+.. ++
T Consensus 275 ~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------------------------~~---------------- 306 (562)
T TIGR01511 275 ANIDTVVFDKTGTLTQGKPTVTDVHVFGDR--------------------------------DR---------------- 306 (562)
T ss_pred hCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------------------------CH----------------
Confidence 999999999999999999999987532100 00
Q ss_pred hHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeec
Q 001023 538 HVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHE 617 (1185)
Q Consensus 538 ~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~ 617 (1185)
++++.. |.++.. .+.||.+.|+++++++.+.....- . .++ .+
T Consensus 307 --~~~l~~---aa~~e~---------------~s~HPia~Ai~~~~~~~~~~~~~~-------------~-~~~---~~- 348 (562)
T TIGR01511 307 --TELLAL---AAALEA---------------GSEHPLAKAIVSYAKEKGITLVEV-------------S-DFK---AI- 348 (562)
T ss_pred --HHHHHH---HHHHhc---------------cCCChHHHHHHHHHHhcCCCcCCC-------------C-CeE---EE-
Confidence 122222 222211 346999999999998876532110 0 111 00
Q ss_pred CCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001023 618 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 697 (1185)
Q Consensus 618 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~ 697 (1185)
..+.+...+. +.+ +..|+++.+.+. +.. +.++..+|.+++.++.
T Consensus 349 ---~g~Gi~~~~~--g~~---~~iG~~~~~~~~-----~~~--------~~~~~~~g~~~~~~~~--------------- 392 (562)
T TIGR01511 349 ---PGIGVEGTVE--GTK---IQLGNEKLLGEN-----AIK--------IDGKAEQGSTSVLVAV--------------- 392 (562)
T ss_pred ---CCceEEEEEC--CEE---EEEECHHHHHhC-----CCC--------CChhhhCCCEEEEEEE---------------
Confidence 1333444332 223 344888776331 111 1123468888888775
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCc
Q 001023 698 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 777 (1185)
Q Consensus 698 ~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~ 777 (1185)
|.+++|.++++|+++||++++|+.|++.|++++|+|||+..+|..+++++|+-
T Consensus 393 -----------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~---- 445 (562)
T TIGR01511 393 -----------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN---- 445 (562)
T ss_pred -----------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc----
Confidence 78999999999999999999999999999999999999999999999999981
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeE
Q 001023 778 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 857 (1185)
Q Consensus 778 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi 857 (1185)
+
T Consensus 446 -------------------------------------------------------------------------------~ 446 (562)
T TIGR01511 446 -------------------------------------------------------------------------------V 446 (562)
T ss_pred -------------------------------------------------------------------------------E
Confidence 5
Q ss_pred EEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc--hhhHHHHHHHHhh
Q 001023 858 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 934 (1185)
Q Consensus 858 ~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr 934 (1185)
++++.|++|..+++.+++ .++.|+|+|||.||++|+++|||||++. |.+. +..+||+++.+ .+-+..+ +..||
T Consensus 447 ~~~~~p~~K~~~v~~l~~-~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~--a~~~Advvl~~~~l~~l~~~-i~lsr 522 (562)
T TIGR01511 447 RAEVLPDDKAALIKELQE-KGRVVAMVGDGINDAPALAQADVGIAIGAGTDV--AIEAADVVLMRNDLNDVATA-IDLSR 522 (562)
T ss_pred EccCChHHHHHHHHHHHH-cCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHH--HHhhCCEEEeCCCHHHHHHH-HHHHH
Confidence 677789999999999998 8899999999999999999999999994 4443 78899999974 5556666 89999
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHH
Q 001023 935 WNYQRMGYMILYNFYRNAVLVFVLFW 960 (1185)
Q Consensus 935 ~~~~ri~~~i~~~~~~ni~~~~~~~~ 960 (1185)
..++++++++.|.+.+|++.+.+.+.
T Consensus 523 ~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 523 KTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987655443
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-57 Score=555.46 Aligned_cols=482 Identities=20% Similarity=0.238 Sum_probs=377.8
Q ss_pred CccchhhhHHHHHHHHHHHHHHHHHHHhhhhH---HhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEee
Q 001023 141 GRGVSILPLAFVLSVTAIKDAYEDYRRHRSDR---IENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLS 217 (1185)
Q Consensus 141 ~~~~~~~~l~~vi~~s~i~~~~ed~~r~k~d~---~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ 217 (1185)
+.|.....+++++++....+.++++|..+..+ +.++.+++|+|||+++++++++|+|||+|.|++||.+|||+++++
T Consensus 16 ~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~ 95 (536)
T TIGR01512 16 GEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS 95 (536)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe
Confidence 44555554445555554444444444433332 345788999999999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecce
Q 001023 218 TSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCE 297 (1185)
Q Consensus 218 ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~ 297 (1185)
|.+.||||+|||||.|+.|.+++.. |+||.+.+|.
T Consensus 96 -----g~~~vdes~lTGEs~pv~k~~g~~v-------------------------~aGt~v~~G~--------------- 130 (536)
T TIGR01512 96 -----GTSTVDESALTGESVPVEKAPGDEV-------------------------FAGAINLDGV--------------- 130 (536)
T ss_pred -----CcEEEEecccCCCCCcEEeCCCCEE-------------------------EeeeEECCce---------------
Confidence 6699999999999999999998877 9999999988
Q ss_pred eecCCeEEEEEEEecccchh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccc
Q 001023 298 LKNTSWALGVAVYAGQETKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYY 374 (1185)
Q Consensus 298 l~nt~~i~gvVv~tG~~Tki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wy 374 (1185)
++++|+.||.+|.+ ......+..+++++++.++++..++.+++++++++.++++.+... |
T Consensus 131 ------~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~- 193 (536)
T TIGR01512 131 ------LTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR----------W- 193 (536)
T ss_pred ------EEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------c-
Confidence 99999999999954 444455566789999999999999999988888877766543210 0
Q ss_pred cccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccc
Q 001023 375 RRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNIN 454 (1185)
Q Consensus 375 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~ 454 (1185)
...+.+++.+++.+|||+|+++++++.......+ +++++++|+++.+
T Consensus 194 -----------------------~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~----------~k~gilik~~~~l 240 (536)
T TIGR01512 194 -----------------------PFWVYRALVLLVVASPCALVISAPAAYLSAISAA----------ARHGILIKGGAAL 240 (536)
T ss_pred -----------------------HHHHHHHHHHHhhcCccccccchHHHHHHHHHHH----------HHCCeEEcCcHHH
Confidence 1167778899999999999999999988777655 8899999999999
Q ss_pred ccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCc
Q 001023 455 EDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTE 534 (1185)
Q Consensus 455 E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 534 (1185)
|.||++|++|||||||||+|+|++.++.. .
T Consensus 241 e~l~~v~~i~fDKTGTLT~~~~~v~~~~~-------------------------------------~------------- 270 (536)
T TIGR01512 241 EALAKIKTVAFDKTGTLTTGRPKVVDVVP-------------------------------------A------------- 270 (536)
T ss_pred HhhcCCCEEEECCCCCCcCCceEEEEeeH-------------------------------------H-------------
Confidence 99999999999999999999999987531 0
Q ss_pred cchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEE
Q 001023 535 EGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLG 614 (1185)
Q Consensus 535 ~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~ 614 (1185)
+++...+.+ .. .+.||.+.|+++++++.+ .+ + ..+
T Consensus 271 ------~~l~~a~~~---e~---------------~~~hp~~~Ai~~~~~~~~-~~-----~------------~~~--- 305 (536)
T TIGR01512 271 ------EVLRLAAAA---EQ---------------ASSHPLARAIVDYARKRE-NV-----E------------SVE--- 305 (536)
T ss_pred ------HHHHHHHHH---hc---------------cCCCcHHHHHHHHHHhcC-CC-----c------------ceE---
Confidence 122222211 11 246999999999998754 10 0 100
Q ss_pred eecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHH
Q 001023 615 LHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQ 694 (1185)
Q Consensus 615 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~ 694 (1185)
.+| .+.+...+ +|..+ ..|+++.+.+. + ...+..+|.+++.++.
T Consensus 306 ~~~----g~gi~~~~---~g~~~--~ig~~~~~~~~-----~----------~~~~~~~~~~~~~v~~------------ 349 (536)
T TIGR01512 306 EVP----GEGVRAVV---DGGEV--RIGNPRSLEAA-----V----------GARPESAGKTIVHVAR------------ 349 (536)
T ss_pred Eec----CCeEEEEE---CCeEE--EEcCHHHHhhc-----C----------CcchhhCCCeEEEEEE------------
Confidence 011 12333222 23222 23777554221 0 0145567878776664
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCC-eEEEEcCCchhhHHHHHHHcCcc
Q 001023 695 SSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGI-KVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 695 ~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGI-kv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
|..++|.+.++|++++|++++|+.|+++|+ +++|+|||+..+|..+++++|+.
T Consensus 350 --------------------------~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~ 403 (536)
T TIGR01512 350 --------------------------DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID 403 (536)
T ss_pred --------------------------CCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh
Confidence 789999999999999999999999999999 99999999999999999999983
Q ss_pred CCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccC
Q 001023 774 TSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC 853 (1185)
Q Consensus 774 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~ 853 (1185)
.
T Consensus 404 ~------------------------------------------------------------------------------- 404 (536)
T TIGR01512 404 E------------------------------------------------------------------------------- 404 (536)
T ss_pred h-------------------------------------------------------------------------------
Confidence 2
Q ss_pred CeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec--CcchhHHhhcCceeec--chhhHHHHH
Q 001023 854 SVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMG--QFRFLVTLL 929 (1185)
Q Consensus 854 ~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~aSD~~i~--~f~~l~~ll 929 (1185)
+++++.|++|..+++.++. .++.|+|+|||.||++|+++||+||++. |.+. +..+||+++. ++.-+..+
T Consensus 405 ---~f~~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~--~~~~ad~vl~~~~l~~l~~~- 477 (536)
T TIGR01512 405 ---VHAELLPEDKLEIVKELRE-KYGPVAMVGDGINDAPALAAADVGIAMGASGSDV--AIETADVVLLNDDLSRLPQA- 477 (536)
T ss_pred ---hhhccCcHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH--HHHhCCEEEECCCHHHHHHH-
Confidence 6788889999999999998 7899999999999999999999999995 3333 7889999994 56667666
Q ss_pred HHHhhHHHHHhhhhhhhhhhhhHHHHHHHHH
Q 001023 930 LVHGHWNYQRMGYMILYNFYRNAVLVFVLFW 960 (1185)
Q Consensus 930 l~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~ 960 (1185)
+..||..++++++++.|.+.+|++.+...++
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999877665543
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-56 Score=573.45 Aligned_cols=491 Identities=18% Similarity=0.222 Sum_probs=394.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhHHh------hcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCC
Q 001023 150 AFVLSVTAIKDAYEDYRRHRSDRIE------NNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTG 223 (1185)
Q Consensus 150 ~~vi~~s~i~~~~ed~~r~k~d~~~------n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G 223 (1185)
.+++++..+.+++|++.+.|+.+.+ .+.+++|+|+|.+++|+.++|+|||+|.|++||.||||+++++ |
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-----g 364 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-----G 364 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE-----c
Confidence 4566677788999999888775543 3678999999999999999999999999999999999999999 6
Q ss_pred cEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCe
Q 001023 224 VAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSW 303 (1185)
Q Consensus 224 ~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~ 303 (1185)
.+.||||.|||||.|+.|.+++.. |+||++.+|.
T Consensus 365 ~~~vdeS~lTGEs~pv~k~~gd~V-------------------------~aGt~~~~G~--------------------- 398 (834)
T PRK10671 365 EAWLDEAMLTGEPIPQQKGEGDSV-------------------------HAGTVVQDGS--------------------- 398 (834)
T ss_pred eEEEeehhhcCCCCCEecCCCCEE-------------------------Eecceeccee---------------------
Confidence 699999999999999999999988 9999999998
Q ss_pred EEEEEEEecccch---hhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCC
Q 001023 304 ALGVAVYAGQETK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFS 380 (1185)
Q Consensus 304 i~gvVv~tG~~Tk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~ 380 (1185)
+.+.|+.+|.+|. +....++++..++++++..+++..++++++++++++.+++|.+...
T Consensus 399 ~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~------------------ 460 (834)
T PRK10671 399 VLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFGP------------------ 460 (834)
T ss_pred EEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------
Confidence 9999999999994 4455556667789999999999999999999888888777644210
Q ss_pred CCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccce
Q 001023 381 EEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQI 460 (1185)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V 460 (1185)
...+...+..++.+++.+|||+|+++++++.+.....+ +++++++|+.+.+|.||++
T Consensus 461 -------------~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~~le~l~~v 517 (834)
T PRK10671 461 -------------APQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA----------AEFGVLVRDADALQRASTL 517 (834)
T ss_pred -------------chHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH----------HHCCeEEecHHHHHhhcCC
Confidence 00123467789999999999999999999988877665 8999999999999999999
Q ss_pred eEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHH
Q 001023 461 KYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVY 540 (1185)
Q Consensus 461 d~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 540 (1185)
|++|||||||||+|+|++.++...+.. ++ .
T Consensus 518 ~~v~fDKTGTLT~g~~~v~~~~~~~~~--------------------------------~~------------------~ 547 (834)
T PRK10671 518 DTLVFDKTGTLTEGKPQVVAVKTFNGV--------------------------------DE------------------A 547 (834)
T ss_pred CEEEEcCCCccccCceEEEEEEccCCC--------------------------------CH------------------H
Confidence 999999999999999999877532100 00 1
Q ss_pred HHHHH-HHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCC
Q 001023 541 DFFLA-LAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFD 619 (1185)
Q Consensus 541 ~~~~~-la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~ 619 (1185)
+++.. .+++ . .+.||.+.|+++++......- .. .++..
T Consensus 548 ~~l~~a~~~e----~---------------~s~hp~a~Ai~~~~~~~~~~~---------------~~-~~~~~------ 586 (834)
T PRK10671 548 QALRLAAALE----Q---------------GSSHPLARAILDKAGDMTLPQ---------------VN-GFRTL------ 586 (834)
T ss_pred HHHHHHHHHh----C---------------CCCCHHHHHHHHHHhhCCCCC---------------cc-cceEe------
Confidence 11222 2222 1 246999999999886432100 00 11100
Q ss_pred CCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001023 620 SDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699 (1185)
Q Consensus 620 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~ 699 (1185)
..+.+...+ +|. .+.+|+++.+.+. ....+.+...++++..+|.+++++|+
T Consensus 587 -~g~Gv~~~~---~g~--~~~~G~~~~~~~~------~~~~~~~~~~~~~~~~~g~~~v~va~----------------- 637 (834)
T PRK10671 587 -RGLGVSGEA---EGH--ALLLGNQALLNEQ------QVDTKALEAEITAQASQGATPVLLAV----------------- 637 (834)
T ss_pred -cceEEEEEE---CCE--EEEEeCHHHHHHc------CCChHHHHHHHHHHHhCCCeEEEEEE-----------------
Confidence 012233222 333 2345999877431 11123456667788899999999996
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceE
Q 001023 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779 (1185)
Q Consensus 700 a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~ 779 (1185)
|..++|.++++|++|+|++++|+.|++.|++++|+|||+.++|..+++++|+..
T Consensus 638 ---------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~----- 691 (834)
T PRK10671 638 ---------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE----- 691 (834)
T ss_pred ---------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-----
Confidence 567999999999999999999999999999999999999999999999999832
Q ss_pred EEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE
Q 001023 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 859 (1185)
Q Consensus 780 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~ 859 (1185)
+++
T Consensus 692 -----------------------------------------------------------------------------~~~ 694 (834)
T PRK10671 692 -----------------------------------------------------------------------------VIA 694 (834)
T ss_pred -----------------------------------------------------------------------------EEe
Confidence 788
Q ss_pred ecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecchhh--HHHHHHHHhhHH
Q 001023 860 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWN 936 (1185)
Q Consensus 860 r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~ 936 (1185)
++.|++|..+++.++. .++.|+|+|||.||++|+++|||||++. |.+. +.++||+++.+.++ +..+ +..||..
T Consensus 695 ~~~p~~K~~~i~~l~~-~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~--a~~~ad~vl~~~~~~~i~~~-i~l~r~~ 770 (834)
T PRK10671 695 GVLPDGKAEAIKRLQS-QGRQVAMVGDGINDAPALAQADVGIAMGGGSDV--AIETAAITLMRHSLMGVADA-LAISRAT 770 (834)
T ss_pred CCCHHHHHHHHHHHhh-cCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHH--HHHhCCEEEecCCHHHHHHH-HHHHHHH
Confidence 8999999999999998 7889999999999999999999999994 4444 88999999987555 5555 8899999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHH
Q 001023 937 YQRMGYMILYNFYRNAVLVFVLF 959 (1185)
Q Consensus 937 ~~ri~~~i~~~~~~ni~~~~~~~ 959 (1185)
++++++++.|.|.+|++.+.+.+
T Consensus 771 ~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 771 LRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988766544
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-49 Score=436.23 Aligned_cols=564 Identities=20% Similarity=0.259 Sum_probs=395.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHHhh----cceEEEEe-CCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCC
Q 001023 148 PLAFVLSVTAIKDAYEDYRRHRSDRIEN----NRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222 (1185)
Q Consensus 148 ~l~~vi~~s~i~~~~ed~~r~k~d~~~n----~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~ 222 (1185)
.|++.+++.-+-|++-+-|-+.+-..+. ...+++++ +|.++.++..+|+.||+|.|+.||.||+|+-+++
T Consensus 71 ~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe----- 145 (681)
T COG2216 71 ILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE----- 145 (681)
T ss_pred HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe-----
Confidence 3444455555566666655444422222 23355555 4899999999999999999999999999999999
Q ss_pred CcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCC
Q 001023 223 GVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTS 302 (1185)
Q Consensus 223 G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~ 302 (1185)
|.++||||++||||-|+.|.++-.- ++ +-.|+.+. ++
T Consensus 146 G~asVdESAITGESaPViresGgD~--------------------------ss----------------VtGgT~v~-SD 182 (681)
T COG2216 146 GVASVDESAITGESAPVIRESGGDF--------------------------SS----------------VTGGTRVL-SD 182 (681)
T ss_pred eeeecchhhccCCCcceeeccCCCc--------------------------cc----------------ccCCcEEe-ee
Confidence 8899999999999999999987432 10 12234444 38
Q ss_pred eEEEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCC
Q 001023 303 WALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDF 379 (1185)
Q Consensus 303 ~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~ 379 (1185)
|+...++..-.+| |+....+.+..+++|-|-.++.+...+.++.+ +++++..-+..+....
T Consensus 183 ~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL-~~~~Tl~p~a~y~~g~--------------- 246 (681)
T COG2216 183 WLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFL-LAVATLYPFAIYSGGG--------------- 246 (681)
T ss_pred eEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHcCCC---------------
Confidence 8999998888888 56667788888899988888766555433322 1112111111111000
Q ss_pred CCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccc
Q 001023 380 SEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459 (1185)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~ 459 (1185)
-..+..-+.|++++||-.+.--++ +..|.-..|+ .+-++++++..++|..|.
T Consensus 247 ------------------~~~i~~LiALlV~LIPTTIGgLLs------AIGIAGMdRv----~~~NViA~SGRAVEaaGD 298 (681)
T COG2216 247 ------------------AASVTVLVALLVCLIPTTIGGLLS------AIGIAGMDRV----TQFNVIATSGRAVEAAGD 298 (681)
T ss_pred ------------------CcCHHHHHHHHHHHhcccHHHHHH------HhhhhhhhHh----hhhceeecCcchhhhcCC
Confidence 013555678899999998766444 3223222344 778999999999999999
Q ss_pred eeEEEEcCCCccccceeEEEEEE-EeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchh
Q 001023 460 IKYVFSDKTGTLTENKMEFRCAS-IWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKH 538 (1185)
Q Consensus 460 Vd~I~sDKTGTLT~n~m~~~~~~-i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 538 (1185)
||+++.|||||+|-|.-.-..+. ++| ..
T Consensus 299 vdtliLDKTGTIT~GnR~A~~f~p~~g---------------------------------------------------v~ 327 (681)
T COG2216 299 VDTLLLDKTGTITLGNRQASEFIPVPG---------------------------------------------------VS 327 (681)
T ss_pred ccEEEecccCceeecchhhhheecCCC---------------------------------------------------CC
Confidence 99999999999997642222211 111 11
Q ss_pred HHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecC
Q 001023 539 VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEF 618 (1185)
Q Consensus 539 ~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F 618 (1185)
.+++..+..++.-. -+-|+-.++++.|++.|+....+... . .....||
T Consensus 328 ~~~la~aa~lsSl~------------------DeTpEGrSIV~LA~~~~~~~~~~~~~------------~--~~~fvpF 375 (681)
T COG2216 328 EEELADAAQLASLA------------------DETPEGRSIVELAKKLGIELREDDLQ------------S--HAEFVPF 375 (681)
T ss_pred HHHHHHHHHHhhhc------------------cCCCCcccHHHHHHHhccCCCccccc------------c--cceeeec
Confidence 22334444443221 13677788999999988654332110 0 1346799
Q ss_pred CCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001023 619 DSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 698 (1185)
Q Consensus 619 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~ 698 (1185)
+.+. |||-+-- +++ .-+-|||...|....... +.+.+++++...++-+..|-..|+++.
T Consensus 376 tA~T-RmSGvd~-~~~--~~irKGA~dai~~~v~~~-~g~~p~~l~~~~~~vs~~GGTPL~V~~---------------- 434 (681)
T COG2216 376 TAQT-RMSGVDL-PGG--REIRKGAVDAIRRYVRER-GGHIPEDLDAAVDEVSRLGGTPLVVVE---------------- 434 (681)
T ss_pred ceec-ccccccC-CCC--ceeecccHHHHHHHHHhc-CCCCCHHHHHHHHHHHhcCCCceEEEE----------------
Confidence 8765 5555433 233 456799999999988865 566889999999999999999999995
Q ss_pred HHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCce
Q 001023 699 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 778 (1185)
Q Consensus 699 ~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~ 778 (1185)
|-.++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||..||.+.|+.+
T Consensus 435 ----------------------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd---- 488 (681)
T COG2216 435 ----------------------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD---- 488 (681)
T ss_pred ----------------------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh----
Confidence 788999999999999999999999999999999999999999999999999842
Q ss_pred EEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEE
Q 001023 779 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 858 (1185)
Q Consensus 779 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~ 858 (1185)
..
T Consensus 489 ------------------------------------------------------------------------------fi 490 (681)
T COG2216 489 ------------------------------------------------------------------------------FI 490 (681)
T ss_pred ------------------------------------------------------------------------------hh
Confidence 67
Q ss_pred EecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHHHhhH
Q 001023 859 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHW 935 (1185)
Q Consensus 859 ~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~ 935 (1185)
++++|++|..+|+.-|. .|+.|+|+|||+||+|+|.+||||++| +|+.. |++|++.+=.|-+. |... +..|++
T Consensus 491 AeatPEdK~~~I~~eQ~-~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqA--AkEAaNMVDLDS~PTKliev-V~IGKq 566 (681)
T COG2216 491 AEATPEDKLALIRQEQA-EGRLVAMTGDGTNDAPALAQADVGVAMNSGTQA--AKEAANMVDLDSNPTKLIEV-VEIGKQ 566 (681)
T ss_pred hcCChHHHHHHHHHHHh-cCcEEEEcCCCCCcchhhhhcchhhhhccccHH--HHHhhcccccCCCccceehH-hhhhhh
Confidence 88999999999999999 899999999999999999999999999 77766 89999998766444 3333 567888
Q ss_pred HHHHhhhhhhhhhhhhHHHHHH---HHHHHHHhh------ccchhhhhHH-HHHHHHHH--hhhHHHHHhhhccccCChH
Q 001023 936 NYQRMGYMILYNFYRNAVLVFV---LFWYVLFTA------FTLTTAINEW-SSVLYSVI--YTSLPTIVVAILDKDLSRR 1003 (1185)
Q Consensus 936 ~~~ri~~~i~~~~~~ni~~~~~---~~~~~~~~~------fs~~~~~~~~-~l~~~n~i--~t~lp~i~l~~~d~d~~~~ 1003 (1185)
..-.-..+..|++..-+.-+|. .+++.++-. .-..+|.+.. .-+.||.+ .-.+|.-.-|+-.+..+..
T Consensus 567 lLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~ 646 (681)
T COG2216 567 LLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLGALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYKPLSAS 646 (681)
T ss_pred heeecccceeeehhhHHHHHHHHHHHHHHhhcccccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHH
Confidence 7766667777887766654443 333333311 0112222222 23556633 2345555567777777776
Q ss_pred HHhcC-Ccccccc
Q 001023 1004 TLLQN-PQLYGAG 1015 (1185)
Q Consensus 1004 ~~~~~-P~ly~~~ 1015 (1185)
.++++ --.|..|
T Consensus 647 ~lL~rNl~iYGlG 659 (681)
T COG2216 647 ALLRRNLLIYGLG 659 (681)
T ss_pred HHHhhCeEEEecC
Confidence 66654 3466554
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=273.11 Aligned_cols=222 Identities=25% Similarity=0.413 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHhhc---ce-EEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCc
Q 001023 149 LAFVLSVTAIKDAYEDYRRHRSDRIENN---RL-ANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGV 224 (1185)
Q Consensus 149 l~~vi~~s~i~~~~ed~~r~k~d~~~n~---~~-~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~ 224 (1185)
|+++++++.+.+.++++|+++..+++++ .+ ++|.|||++++++|++|+|||||+|++||.+|||+++|+ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 5678888888999999999999887653 34 899999999999999999999999999999999999999 267
Q ss_pred EEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeE
Q 001023 225 AYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWA 304 (1185)
Q Consensus 225 ~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i 304 (1185)
|+||||+||||+.|+.|.+. +++.+|++++||.++ +||+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------~~~~~~~i~~Gs~v~-~g~~ 116 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------PLNPGNIIFAGSIVV-SGWG 116 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------CCCTTTEE-TTEEEE-EEEE
T ss_pred cccccccccccccccccccc----------------------------------------cccccchhhcccccc-cccc
Confidence 99999999999999999763 466789999999999 7999
Q ss_pred EEEEEEecccchhh---hccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCC
Q 001023 305 LGVAVYAGQETKVM---LNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSE 381 (1185)
Q Consensus 305 ~gvVv~tG~~Tki~---~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~ 381 (1185)
+|+|++||.+|++. +....++.+++++++.++++..+++++.++++++++++++++. .
T Consensus 117 ~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------------- 177 (230)
T PF00122_consen 117 IGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFND--S----------------- 177 (230)
T ss_dssp EEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTGS--T-----------------
T ss_pred ccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceecc--c-----------------
Confidence 99999999999653 3344566678999999999999999988888888876655430 0
Q ss_pred CCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccccc
Q 001023 382 EGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINED 456 (1185)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~ 456 (1185)
...+...+..++.+++.++|++|++++++....++.++ .++++++|+++.+|.
T Consensus 178 ------------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~----------~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 178 ------------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRL----------AKNGIIVKNLSALEA 230 (230)
T ss_dssp ------------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH----------HHTTEEESSTTHHHH
T ss_pred ------------ccccccccccccceeeeecccceeehHHHHHHHHHHHH----------HHCCEEEeCcccccC
Confidence 01122378888999999999999999999999988777 789999999999884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.1e-22 Score=213.67 Aligned_cols=97 Identities=35% Similarity=0.555 Sum_probs=90.8
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHh
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 800 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~ 800 (1185)
++.++|.+.+.|++++|++++|+.|+++|++++|+|||+..+|..+|+.+||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 789999999999999999999999999999999999999999999999999932
Q ss_pred hcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEec--CcccH--HHHHHHHHhh
Q 001023 801 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV--APLQK--AGIVALVKTR 876 (1185)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~--sP~qK--a~iV~~lk~~ 876 (1185)
..+++++ +|++| ..+++.++.
T Consensus 169 ------------------------------------------------------~~v~a~~~~kP~~k~~~~~i~~l~~- 193 (215)
T PF00702_consen 169 ------------------------------------------------------SIVFARVIGKPEPKIFLRIIKELQV- 193 (215)
T ss_dssp ------------------------------------------------------EEEEESHETTTHHHHHHHHHHHHTC-
T ss_pred ------------------------------------------------------ccccccccccccchhHHHHHHHHhc-
Confidence 2399999 99999 999999986
Q ss_pred CCCeEEEEcCCcCChhhhhhcc
Q 001023 877 TSDMTLAIGDGANDVSMIQMAD 898 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~Ad 898 (1185)
.++.|+|||||.||++|+++||
T Consensus 194 ~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 194 KPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TGGGEEEEESSGGHHHHHHHSS
T ss_pred CCCEEEEEccCHHHHHHHHhCc
Confidence 5669999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.9e-14 Score=129.20 Aligned_cols=126 Identities=22% Similarity=0.382 Sum_probs=109.5
Q ss_pred cEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhh
Q 001023 722 LCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMS 801 (1185)
Q Consensus 722 l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 801 (1185)
+...+.++---+|=++|+++|++|++. ++|.+.|||.+.+-...|.-.|+....
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------- 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------- 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee-------------------------
Confidence 467888898999999999999999999 999999999999999999998874311
Q ss_pred cccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeE
Q 001023 802 KKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMT 881 (1185)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~v 881 (1185)
+++-..|+.|+.+++.||+ ++++|
T Consensus 73 -------------------------------------------------------v~a~a~~e~K~~ii~eLkk-~~~k~ 96 (152)
T COG4087 73 -------------------------------------------------------VFAGADPEMKAKIIRELKK-RYEKV 96 (152)
T ss_pred -------------------------------------------------------eecccCHHHHHHHHHHhcC-CCcEE
Confidence 8888899999999999998 89999
Q ss_pred EEEcCCcCChhhhhhcceeEEecCcchhH--HhhcCceeecchhhHHHHH
Q 001023 882 LAIGDGANDVSMIQMADVGVGISGQEGRQ--AVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 882 l~iGDG~NDv~mL~~AdVGIgisg~e~~q--A~~aSD~~i~~f~~l~~ll 929 (1185)
.|+|||+||.+||++||+||..-+.|+.. +..+||+++-+-+-+..++
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999999999999999999775555532 4589999998877665553
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.6e-13 Score=126.49 Aligned_cols=90 Identities=31% Similarity=0.431 Sum_probs=69.3
Q ss_pred HhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEE
Q 001023 547 AACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMS 626 (1185)
Q Consensus 547 a~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrms 626 (1185)
|+||++.. ..+++.+..+ ..++|+|.||+.++.+.|..+. ..+.+. .|++++.+||||+||||+
T Consensus 1 ~LCn~a~~----~~~~~~~~~~-~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~-~~~~~~~~pF~S~rK~ms 64 (91)
T PF13246_consen 1 ALCNDAEI----EYDDESKTEE-IIGDPTEKALLRFAKKLGVGID----------IKEIRS-KYKIVAEIPFDSERKRMS 64 (91)
T ss_pred CCccccEe----ecCCCCcccc-ccCCcCHHHHHHHHHHcCCCCc----------HHHHHh-hcceeEEEccCcccceeE
Confidence 58999876 3333322222 4578999999999999965433 122345 899999999999999999
Q ss_pred EEEecCCCcEEEEEcCchhHHHHHHHh
Q 001023 627 VILGLPDKTVTLFVKGADTSMFSVIAK 653 (1185)
Q Consensus 627 viv~~~~~~~~l~~KGa~~~i~~~~~~ 653 (1185)
||++ .++.+.+|+|||||.|+++|+.
T Consensus 65 vv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 65 VVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred EEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 9999 3446888999999999999974
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.8e-08 Score=104.88 Aligned_cols=166 Identities=13% Similarity=0.201 Sum_probs=115.6
Q ss_pred hhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhHHHHHhhheeecccccc-
Q 001023 971 TAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYW- 1049 (1185)
Q Consensus 971 ~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~vif~~~~~~~~- 1049 (1185)
.++++.|++|.|++.+.+|++++|.+. +++.+++.|+ ..+++.+++++.+...+..|++++++.++.++....
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e~---~~~~im~r~P---r~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~ 75 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFEP---PDPDIMKRPP---RDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI 75 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGSS----STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcCc---chhhhhhccc---cccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 578999999999999999999999843 3444555544 278889999999999999999999999877543322
Q ss_pred -CCccc-----chhhhHHHHHHHHHHHHHHHHHhhcc--------chhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHH
Q 001023 1050 -DSTID-----VSSIGDLWTLAVVILVNIHLAMDVIR--------WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAF 1115 (1185)
Q Consensus 1050 -g~~~~-----~~~~~~~~~~~~v~~~~~~~~l~~~~--------~~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~ 1115 (1185)
|...+ .....|+.|+++++..-+. .+.+++ .....+..++.++++.++++.+..++|.++.. +
T Consensus 76 ~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~-~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~--f 152 (182)
T PF00689_consen 76 FGWDEETNNDNLAQAQTMAFTALVLSQLFN-AFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRI--F 152 (182)
T ss_dssp TCSSSHHHTTCHHHHHHHHHHHHHHHHHHH-HHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHH--S
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHhh-hcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhh--h
Confidence 22221 2335677777777765555 444444 23345778888888888888888888865553 4
Q ss_pred HHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001023 1116 FEVAKTRLFWFCLMIILVAALIPRFLVKFL 1145 (1185)
Q Consensus 1116 ~~~~~~~~~wl~~llv~~~~~l~~~~~k~~ 1145 (1185)
.....++..|+..+...++.++..++.|.+
T Consensus 153 ~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 153 GTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp T----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444567899999888888888888888864
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.65 E-value=1e-07 Score=101.97 Aligned_cols=125 Identities=22% Similarity=0.127 Sum_probs=90.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.+.|+.|++.| ++.++||-....+..++..+|+..--..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an---------------------------------- 112 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH---------------------------------- 112 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce----------------------------------
Confidence 67999999999999975 9999999999999999999998421000
Q ss_pred cccCCCCcCcCcEEEEEcC-chhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 813 NSERSSGAGVAQLALIIDG-TSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G-~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
-+.+++ ..++- . .. ..|..|..+++.+++ .+..+.++|||.||.
T Consensus 113 -------------~l~~~~~g~~tG-----------------~--~~--~~~~~K~~~l~~l~~-~~~~~v~vGDs~nDl 157 (203)
T TIGR02137 113 -------------KLEIDDSDRVVG-----------------Y--QL--RQKDPKRQSVIAFKS-LYYRVIAAGDSYNDT 157 (203)
T ss_pred -------------eeEEecCCeeEC-----------------e--ee--cCcchHHHHHHHHHh-hCCCEEEEeCCHHHH
Confidence 011111 00000 0 11 347789999999987 677899999999999
Q ss_pred hhhhhcceeEEecCcchhHHhhcCceeecc-hhhHHHH
Q 001023 892 SMIQMADVGVGISGQEGRQAVMSSDFAMGQ-FRFLVTL 928 (1185)
Q Consensus 892 ~mL~~AdVGIgisg~e~~qA~~aSD~~i~~-f~~l~~l 928 (1185)
+|++.|++||++.+++.. ...+-|+.... +.-|...
T Consensus 158 ~ml~~Ag~~ia~~ak~~~-~~~~~~~~~~~~~~~~~~~ 194 (203)
T TIGR02137 158 TMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 194 (203)
T ss_pred HHHHhCCCCEEecCCHHH-HHhCCCCCcccCHHHHHHH
Confidence 999999999999998874 44455665433 4434443
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.61 E-value=4.8e-07 Score=97.27 Aligned_cols=113 Identities=21% Similarity=0.252 Sum_probs=85.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
.++.+|+.+.++.++++|.+||++||=-..-+..+|+.+|+...-...+.+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d--------------------------- 128 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD--------------------------- 128 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC---------------------------
Confidence 79999999999999999999999999999999999999999543221111110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC---CeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g---~~vl~iGDG~ 888 (1185)
. +++|.. +--.+..+.|+..++.+.+..| +.+.++|||+
T Consensus 129 --------------G-~ltG~v-----------------------~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~ 170 (212)
T COG0560 129 --------------G-KLTGRV-----------------------VGPICDGEGKAKALRELAAELGIPLEETVAYGDSA 170 (212)
T ss_pred --------------C-EEecee-----------------------eeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCch
Confidence 0 222221 2223344789999876665444 3599999999
Q ss_pred CChhhhhhcceeEEecCcchh
Q 001023 889 NDVSMIQMADVGVGISGQEGR 909 (1185)
Q Consensus 889 NDv~mL~~AdVGIgisg~e~~ 909 (1185)
||.|||+.|+.+|++......
T Consensus 171 nDlpml~~ag~~ia~n~~~~l 191 (212)
T COG0560 171 NDLPMLEAAGLPIAVNPKPKL 191 (212)
T ss_pred hhHHHHHhCCCCeEeCcCHHH
Confidence 999999999999999877653
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=4e-07 Score=103.94 Aligned_cols=131 Identities=24% Similarity=0.273 Sum_probs=92.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.+.|+.|+++|+++.++||.....+..+...+|+..--...+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~l-------------------------------- 228 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANEL-------------------------------- 228 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEE--------------------------------
Confidence 588999999999999999999999998888888888888732100000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE-ecCcccHHHHHHHHHhhCC---CeEEEEcCCc
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC-RVAPLQKAGIVALVKTRTS---DMTLAIGDGA 888 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~-r~sP~qKa~iV~~lk~~~g---~~vl~iGDG~ 888 (1185)
-+.+|.--.. +.. -+..+.|+..++.+.+..| ..|.|||||+
T Consensus 229 --------------ei~dg~ltg~--------------------v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~ 274 (322)
T PRK11133 229 --------------EIMDGKLTGN--------------------VLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGA 274 (322)
T ss_pred --------------EEECCEEEeE--------------------ecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCH
Confidence 0112210000 000 0234689999988876433 6799999999
Q ss_pred CChhhhhhcceeEEecCcchhHHhhcCceeecchhhHHHHHHHH
Q 001023 889 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVH 932 (1185)
Q Consensus 889 NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~lll~~ 932 (1185)
||.+|++.|++||++...+. ....||.++. +..|..+|...
T Consensus 275 NDl~m~~~AGlgiA~nAkp~--Vk~~Ad~~i~-~~~l~~~l~~~ 315 (322)
T PRK11133 275 NDLPMIKAAGLGIAYHAKPK--VNEQAQVTIR-HADLMGVLCIL 315 (322)
T ss_pred HHHHHHHHCCCeEEeCCCHH--HHhhCCEEec-CcCHHHHHHHh
Confidence 99999999999999976665 6679999996 44454444333
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=2.1e-06 Score=96.76 Aligned_cols=62 Identities=24% Similarity=0.321 Sum_probs=49.7
Q ss_pred EecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 859 CRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
..++|. .|+.-++.+.+..| ..|+++|||.||.+||+.|++||+|...... ++.+||++..+
T Consensus 188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~vt~~ 254 (270)
T PRK10513 188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPS-VKEVAQFVTKS 254 (270)
T ss_pred EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHH-HHHhcCeeccC
Confidence 455554 79999999877644 5799999999999999999999999544332 78899998854
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.8e-07 Score=96.82 Aligned_cols=124 Identities=23% Similarity=0.336 Sum_probs=88.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+++.++.|++.|+++.++||.....+..+....|+..--...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~--------------------------------- 131 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANR--------------------------------- 131 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeE---------------------------------
Confidence 68999999999999999999999999999999999998884310000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhhCC---CeEEEEcCCc
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTRTS---DMTLAIGDGA 888 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r-~sP~qKa~iV~~lk~~~g---~~vl~iGDG~ 888 (1185)
+..++..+. ..+.++ ..+..|..+++.+.+..+ ..+++|||+.
T Consensus 132 --------------~~~~~~~~~-------------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~ 178 (219)
T TIGR00338 132 --------------LEVEDGKLT-------------------GLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGA 178 (219)
T ss_pred --------------EEEECCEEE-------------------EEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCH
Confidence 000000000 001111 123447777776554322 4689999999
Q ss_pred CChhhhhhcceeEEecCcchhHHhhcCceeecchhh
Q 001023 889 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF 924 (1185)
Q Consensus 889 NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~ 924 (1185)
+|+.|.+.|++++++.+.+. ...+||.+|.+.++
T Consensus 179 ~Di~aa~~ag~~i~~~~~~~--~~~~a~~~i~~~~~ 212 (219)
T TIGR00338 179 NDLSMIKAAGLGIAFNAKPK--LQQKADICINKKDL 212 (219)
T ss_pred HHHHHHHhCCCeEEeCCCHH--HHHhchhccCCCCH
Confidence 99999999999999987765 66789999987554
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.37 E-value=8e-06 Score=91.67 Aligned_cols=185 Identities=20% Similarity=0.214 Sum_probs=103.1
Q ss_pred Eeeecccc-cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCC--------------CHHHH
Q 001023 726 GASGIEDK-LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN--------------SKESC 790 (1185)
Q Consensus 726 G~~~ieD~-lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~--------------~~~~~ 790 (1185)
|.+.-.|. +.+.+.++|+++++.|+++.++||.....+..+..++++-. ..+..++. +.+..
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~ 88 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDV 88 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHH
Confidence 33333444 88999999999999999999999999999999999999854 22222222 33333
Q ss_pred HHHHHHHHHhhcc-cccCC-C------CCCcccCC------------CCcCcCcE-EEEEcCchhhhhccHHHHHHHHHH
Q 001023 791 RKSLEDAIAMSKK-LKTVP-G------VSHNSERS------------SGAGVAQL-ALIIDGTSLVYILDSELDEQLFQL 849 (1185)
Q Consensus 791 ~~~~~~~~~~~~~-~~~~~-~------~~~~~~~~------------~~~~~~~~-~lvi~G~~l~~~l~~~~~~~~~~l 849 (1185)
...+......... ..... . ........ ........ .+.++- ..+.+.+....+
T Consensus 89 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l 162 (264)
T COG0561 89 EELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDK------DHEILEELVEAL 162 (264)
T ss_pred HHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEec------ChHhHHHHHHHH
Confidence 3333322111010 00000 0 00000000 00000000 001110 001111222222
Q ss_pred hccCC--eeEEEecCc-------c--cHHHHHHHHHhhCCC---eEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcC
Q 001023 850 AGTCS--VVLCCRVAP-------L--QKAGIVALVKTRTSD---MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSS 915 (1185)
Q Consensus 850 ~~~~~--~vi~~r~sP-------~--qKa~iV~~lk~~~g~---~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aS 915 (1185)
...+. .+.+++..| . .|+.-++.+.+..|- -|+++||+.||.+||+.|..||+|.... -.++..|
T Consensus 163 ~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~-~~~k~~A 241 (264)
T COG0561 163 RKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNAD-EELKELA 241 (264)
T ss_pred hhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCC-HHHHhhC
Confidence 22211 234444444 2 799999998876443 4999999999999999999999995552 2388999
Q ss_pred ceeec
Q 001023 916 DFAMG 920 (1185)
Q Consensus 916 D~~i~ 920 (1185)
|++..
T Consensus 242 ~~vt~ 246 (264)
T COG0561 242 DYVTT 246 (264)
T ss_pred CcccC
Confidence 96644
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.4e-06 Score=92.88 Aligned_cols=181 Identities=17% Similarity=0.128 Sum_probs=98.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC----CCceEEE--------EeCCCHHHHHHHHHHHHHh
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKMTQVI--------INSNSKESCRKSLEDAIAM 800 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~----~~~~~~~--------i~~~~~~~~~~~~~~~~~~ 800 (1185)
++.+.+.++|++|++.|+++.+.||.....+..+..++++.. .+...+. -..-+.+...+.++.....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 588999999999999999999999999999999999988732 1111111 1111233333333322111
Q ss_pred hcccccCCCCCCc-cc------------C--C-----C-CcCcCcEEEEEcCchhhhhccHHHHHHHHHHhc-cCCee--
Q 001023 801 SKKLKTVPGVSHN-SE------------R--S-----S-GAGVAQLALIIDGTSLVYILDSELDEQLFQLAG-TCSVV-- 856 (1185)
Q Consensus 801 ~~~~~~~~~~~~~-~~------------~--~-----~-~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~-~~~~v-- 856 (1185)
.....+....... .. . . . .......-+.+-+.. . .+ +++...+.+... ....+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~-~-~~-~~~~~~l~~~~~~~~~~~~s 175 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDH-D-DL-TRLQIQLNEALGERAHLCFS 175 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCH-H-HH-HHHHHHHHHHhcCCEEEEEc
Confidence 1100000000000 00 0 0 0 000000111111111 0 00 112222221110 11110
Q ss_pred --EEEecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCce
Q 001023 857 --LCCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 917 (1185)
Q Consensus 857 --i~~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~ 917 (1185)
-+..++|. .|+.-++.+.+..| ..|+++|||.||++||+.|+.||+|..... +++.+||+
T Consensus 176 ~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~-~vK~~A~~ 242 (272)
T PRK15126 176 ATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMP-QLRAELPH 242 (272)
T ss_pred CCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChH-HHHHhCCC
Confidence 24466676 59999999987644 579999999999999999999999954433 27888886
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.26 E-value=9.9e-06 Score=89.61 Aligned_cols=188 Identities=15% Similarity=0.183 Sum_probs=109.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc------------CCCceEEEEeCCCHHHHHHHHHHHHH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL------------TSKMTQVIINSNSKESCRKSLEDAIA 799 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll------------~~~~~~~~i~~~~~~~~~~~~~~~~~ 799 (1185)
.++-+.+.++|++|+++|+++.+.||.....+..+..+.++- ....+.+.-..-+.+..+..++....
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 456789999999999999999999999999999999998875 12222233333344555555555554
Q ss_pred hhcccccCCCCCCc-ccC-C-----------------------CCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhcc-C
Q 001023 800 MSKKLKTVPGVSHN-SER-S-----------------------SGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGT-C 853 (1185)
Q Consensus 800 ~~~~~~~~~~~~~~-~~~-~-----------------------~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~-~ 853 (1185)
......+....... ... . ......+.. ......-...+.+++...+...... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEE-EESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeee-ccccchhhhhhhhhhccccCcceeEEE
Confidence 33222221111000 000 0 000011111 1111111122223444444322100 0
Q ss_pred CeeEEEecCc--ccHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 854 SVVLCCRVAP--LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 854 ~~vi~~r~sP--~qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
..--+-.++| -.|+.-++.+.+.. ...++++||+.||.+|++.|+.||+|..+... .+..||++...
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~-~k~~a~~i~~~ 244 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPE-LKKAADYITPS 244 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HH-HHHHSSEEESS
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHH-HHHhCCEEecC
Confidence 0011233444 58999999998653 36899999999999999999999999544332 77889998765
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.19 E-value=8.8e-06 Score=83.29 Aligned_cols=95 Identities=16% Similarity=0.179 Sum_probs=72.4
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCc
Q 001023 741 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 820 (1185)
Q Consensus 741 ~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1185)
+|+.|++.|+++.++||+....+..+....|+-.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------------------------- 69 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------------------------- 69 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------------------------
Confidence 9999999999999999999999999999888732
Q ss_pred CcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhc
Q 001023 821 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 897 (1185)
Q Consensus 821 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 897 (1185)
.+.. ...|...++.+.+. ....++++||+.||..|++.|
T Consensus 70 ------------------------------------~~~~--~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~a 111 (154)
T TIGR01670 70 ------------------------------------LYQG--QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKV 111 (154)
T ss_pred ------------------------------------EEec--ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 0110 02344555444332 335799999999999999999
Q ss_pred ceeEEecCcchhHHhhcCceeec
Q 001023 898 DVGVGISGQEGRQAVMSSDFAMG 920 (1185)
Q Consensus 898 dVGIgisg~e~~qA~~aSD~~i~ 920 (1185)
++++++...... ....+|+++.
T Consensus 112 g~~~~v~~~~~~-~~~~a~~i~~ 133 (154)
T TIGR01670 112 GLSVAVADAHPL-LIPRADYVTR 133 (154)
T ss_pred CCeEecCCcCHH-HHHhCCEEec
Confidence 999999655332 6677899885
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.5e-05 Score=85.85 Aligned_cols=125 Identities=22% Similarity=0.192 Sum_probs=87.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||++++++.|+++ +++.++||-....+..+...+|+..--...
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~--------------------------------- 113 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHS--------------------------------- 113 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcce---------------------------------
Confidence 4679999999999999 999999999999999999998884210000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r-~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
+..++... ++... ..|..|..+++.++. .+..++|||||.||+
T Consensus 114 --------------~~~~~~~~---------------------i~~~~~~~p~~k~~~l~~~~~-~~~~~v~iGDs~~D~ 157 (205)
T PRK13582 114 --------------LEVDEDGM---------------------ITGYDLRQPDGKRQAVKALKS-LGYRVIAAGDSYNDT 157 (205)
T ss_pred --------------EEECCCCe---------------------EECccccccchHHHHHHHHHH-hCCeEEEEeCCHHHH
Confidence 01110000 00011 136788888888876 678899999999999
Q ss_pred hhhhhcceeEEecCcchhHHhhcCce-eecchhhHHHH
Q 001023 892 SMIQMADVGVGISGQEGRQAVMSSDF-AMGQFRFLVTL 928 (1185)
Q Consensus 892 ~mL~~AdVGIgisg~e~~qA~~aSD~-~i~~f~~l~~l 928 (1185)
.|.++|++|+.....+.. ....++. ++.+++-+..+
T Consensus 158 ~~~~aa~~~v~~~~~~~~-~~~~~~~~~~~~~~el~~~ 194 (205)
T PRK13582 158 TMLGEADAGILFRPPANV-IAEFPQFPAVHTYDELLAA 194 (205)
T ss_pred HHHHhCCCCEEECCCHHH-HHhCCcccccCCHHHHHHH
Confidence 999999999987655542 2234555 67777655444
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.6e-05 Score=89.41 Aligned_cols=62 Identities=26% Similarity=0.333 Sum_probs=48.3
Q ss_pred EEecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCc--eeec
Q 001023 858 CCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD--FAMG 920 (1185)
Q Consensus 858 ~~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD--~~i~ 920 (1185)
+..+.|. .|+.-++.+.++.| ..|+++|||.||.+||+.|+.||+|...... ++.+|| ++..
T Consensus 181 ~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~-vK~~A~~~~v~~ 249 (266)
T PRK10976 181 CLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQR-LKDLLPELEVIG 249 (266)
T ss_pred eEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHH-HHHhCCCCeecc
Confidence 4566665 69999999877644 5799999999999999999999999544332 777777 5554
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.14 E-value=7.1e-06 Score=90.01 Aligned_cols=178 Identities=17% Similarity=0.187 Sum_probs=99.3
Q ss_pred ccc-cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC----CCceEEEEe--C-----CCHHHHHHHHHHHH
Q 001023 731 EDK-LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKMTQVIIN--S-----NSKESCRKSLEDAI 798 (1185)
Q Consensus 731 eD~-lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~----~~~~~~~i~--~-----~~~~~~~~~~~~~~ 798 (1185)
.|+ +-+.+.++|++|++.|+++.+.||.....+..+++.+++-. .+...+... . ...+.....++...
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 444 77899999999999999999999999999999988888632 111122111 0 01112222222211
Q ss_pred HhhcccccCCCCCCcccCCCCcCcCcEEEE-EcCchhhhhccHHHHHHHHHHhccC---CeeEEEecCccc--HHHHHHH
Q 001023 799 AMSKKLKTVPGVSHNSERSSGAGVAQLALI-IDGTSLVYILDSELDEQLFQLAGTC---SVVLCCRVAPLQ--KAGIVAL 872 (1185)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv-i~G~~l~~~l~~~~~~~~~~l~~~~---~~vi~~r~sP~q--Ka~iV~~ 872 (1185)
+..... .......... .....+. .+.... ++....+....... .+-.+....|.. |+.-++.
T Consensus 97 ~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~ 164 (230)
T PRK01158 97 KRFPEA--STSLTKLDPD-----YRKTEVALRRTVPV-----EEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKK 164 (230)
T ss_pred Hhcccc--ceeeecCCcc-----cccceeeecccccH-----HHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHH
Confidence 111000 0000000000 0001111 122111 12222222211111 111234666665 9999998
Q ss_pred HHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 873 VKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 873 lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
+.+..| ..++++|||.||.+|++.|++||+|..... .++.+||++..+
T Consensus 165 l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~vk~~a~~v~~~ 215 (230)
T PRK01158 165 LAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADE-ELKEAADYVTEK 215 (230)
T ss_pred HHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccH-HHHHhcceEecC
Confidence 876533 569999999999999999999999954443 277889998754
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.8e-06 Score=84.08 Aligned_cols=114 Identities=23% Similarity=0.373 Sum_probs=80.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCce--EEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT--QVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
.+-+|++|....|++.|.+|.++||-=..-+..+|.++||...+.. .+.++
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd--------------------------- 140 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFD--------------------------- 140 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeec---------------------------
Confidence 4679999999999999999999999999999999999999653321 11110
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh-CCCeEEEEcCCcC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIGDGAN 889 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~-~g~~vl~iGDG~N 889 (1185)
-+|+-+..-.. -.-+...-|+.+++.+++. .-+.++|||||+|
T Consensus 141 ------------------~~Gk~~gfd~~------------------~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGat 184 (227)
T KOG1615|consen 141 ------------------KDGKYLGFDTN------------------EPTSDSGGKAEVIALLRKNYNYKTIVMVGDGAT 184 (227)
T ss_pred ------------------cCCcccccccC------------------CccccCCccHHHHHHHHhCCChheeEEecCCcc
Confidence 01111110000 0001134799999999875 4568999999999
Q ss_pred ChhhhhhcceeEEecCcchh
Q 001023 890 DVSMIQMADVGVGISGQEGR 909 (1185)
Q Consensus 890 Dv~mL~~AdVGIgisg~e~~ 909 (1185)
|..|+..||.=||-.|...+
T Consensus 185 Dlea~~pa~afi~~~g~~~r 204 (227)
T KOG1615|consen 185 DLEAMPPADAFIGFGGNVIR 204 (227)
T ss_pred ccccCCchhhhhccCCceEc
Confidence 99999998877777665443
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.7e-05 Score=86.07 Aligned_cols=173 Identities=17% Similarity=0.183 Sum_probs=95.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCC----CceEEEEeCCCHH---HHHHHHHHHHHhhcccc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQVIINSNSKE---SCRKSLEDAIAMSKKLK 805 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~----~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~ 805 (1185)
++-+.+.++|++|+++|+++.+.||.....+..+++.+++... +...+........ .....+...... ..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~---~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKK---KR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhh---hh
Confidence 4889999999999999999999999999999999998886421 1111111111000 000000000000 00
Q ss_pred cCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHHHhhCC--
Q 001023 806 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALVKTRTS-- 878 (1185)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v---i~~r~sP--~qKa~iV~~lk~~~g-- 878 (1185)
... ....... ......+..+++... .+...+... ....+ .+-.++| ..|+..++.+.+..|
T Consensus 95 ~~~--~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~l~~~--~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~ 162 (215)
T TIGR01487 95 FPR--DRLSNEY---PRASLVIMREGKDVD-----EVREIIKER--GLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIK 162 (215)
T ss_pred hhh--hhccccc---ceeEEEEecCCccHH-----HHHHHHHhC--CeEEEecCceEEEecCCCChHHHHHHHHHHhCCC
Confidence 000 0000000 011112222332222 112111111 11111 1234444 589999999876533
Q ss_pred -CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 879 -DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 879 -~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
..++++||+.||.+|++.|++|++|..... +++..||++...
T Consensus 163 ~~~~i~iGDs~ND~~ml~~ag~~vam~na~~-~~k~~A~~v~~~ 205 (215)
T TIGR01487 163 PEEVAAIGDSENDIDLFRVVGFKVAVANADD-QLKEIADYVTSN 205 (215)
T ss_pred HHHEEEECCCHHHHHHHHhCCCeEEcCCccH-HHHHhCCEEcCC
Confidence 469999999999999999999999944332 277889998753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.8e-05 Score=96.78 Aligned_cols=61 Identities=33% Similarity=0.500 Sum_probs=49.1
Q ss_pred EecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc
Q 001023 859 CRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~ 921 (1185)
..+.|. .|+.-++.+.+..| ..|+++|||.||++||+.|+.||+|. +.+. ++.+||++..+
T Consensus 499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~ee--VK~~Ad~VT~s 565 (580)
T PLN02887 499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEK--TKAVADVIGVS 565 (580)
T ss_pred EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHH--HHHhCCEEeCC
Confidence 344444 79999999987644 57999999999999999999999994 4444 78889998754
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.2e-05 Score=87.88 Aligned_cols=173 Identities=16% Similarity=0.196 Sum_probs=95.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCC------C-HH----HHH-HHHHHHHHh
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN------S-KE----SCR-KSLEDAIAM 800 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~------~-~~----~~~-~~~~~~~~~ 800 (1185)
.+.+.+.++|++|+++||++.+.||.....+..+.+..|+.. ..+..++. . .. ... .........
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 477888999999999999999999999999999999888422 22222221 0 00 000 000000000
Q ss_pred hcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccC---CeeEEEecCc--ccHHHHHHHHHh
Q 001023 801 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC---SVVLCCRVAP--LQKAGIVALVKT 875 (1185)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~---~~vi~~r~sP--~qKa~iV~~lk~ 875 (1185)
.. . .......... .......+.... ..+ ........+.... .+..+..+.| ..|+.-++.+.+
T Consensus 92 ~~-~----~~~~~~~~~~-~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~ 159 (225)
T TIGR01482 92 KT-F----PFSRLKVQYP-RRASLVKMRYGI-DVD-----TVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKE 159 (225)
T ss_pred cc-c----chhhhccccc-cccceEEEeecC-CHH-----HHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHH
Confidence 00 0 0000000000 001111222211 111 1111111111111 1113445555 479999988876
Q ss_pred hCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 876 RTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 876 ~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
..| ..|+++||+.||.+|++.|++||+|..... ..+..||++..+
T Consensus 160 ~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~-~~k~~A~~vt~~ 207 (225)
T TIGR01482 160 KLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQP-ELKEWADYVTES 207 (225)
T ss_pred HhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhH-HHHHhcCeecCC
Confidence 533 579999999999999999999999954433 277889998753
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=7.8e-05 Score=83.97 Aligned_cols=56 Identities=23% Similarity=0.402 Sum_probs=44.2
Q ss_pred cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 865 QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 865 qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
.|+.-++.+.+..| ..|+++||+.||.+|++.|++||++..... ..+.+||+++.+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~-~lk~~Ad~v~~~ 257 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADD-AVKARADLVIGD 257 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchH-HHHHhCCEEEec
Confidence 69988887765444 569999999999999999999999943322 266789998854
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.8e-05 Score=84.02 Aligned_cols=93 Identities=25% Similarity=0.334 Sum_probs=69.3
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCccc
Q 001023 736 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSE 815 (1185)
Q Consensus 736 ~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1185)
+++++.|+.++++|+++|++||+....+..+++.+|+..... +.-.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v--~~~~-------------------------------- 137 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV--IGNE-------------------------------- 137 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE--EEEE--------------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE--EEEe--------------------------------
Confidence 677799999999999999999999999999999999864221 0000
Q ss_pred CCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcc-c--HHHHHHHH-----HhhCCCeEEEEcCC
Q 001023 816 RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL-Q--KAGIVALV-----KTRTSDMTLAIGDG 887 (1185)
Q Consensus 816 ~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~-q--Ka~iV~~l-----k~~~g~~vl~iGDG 887 (1185)
+ -+.. ......|.+|. + |+..++.+ +......++++|||
T Consensus 138 -----------~-~~~~---------------------~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs 184 (192)
T PF12710_consen 138 -----------L-FDNG---------------------GGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDS 184 (192)
T ss_dssp -----------E-ECTT---------------------CCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESS
T ss_pred -----------e-eecc---------------------cceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECC
Confidence 0 0000 12255666666 5 99999999 11267899999999
Q ss_pred cCChhhhh
Q 001023 888 ANDVSMIQ 895 (1185)
Q Consensus 888 ~NDv~mL~ 895 (1185)
.||.+|||
T Consensus 185 ~~D~~~lr 192 (192)
T PF12710_consen 185 INDLPMLR 192 (192)
T ss_dssp GGGHHHHH
T ss_pred HHHHHHhC
Confidence 99999997
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.6e-05 Score=83.47 Aligned_cols=143 Identities=13% Similarity=0.131 Sum_probs=88.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-+++||+++.++.|++.|+++.++||.....+..+....+... .++ -+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~---~i~-~n---------------------------- 116 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKD---RIY-CN---------------------------- 116 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcc---cEE-ec----------------------------
Confidence 5799999999999999999999999999888888887653321 110 00
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
-++++|..+...... .|. .-|.......|..+++.++. ....++|||||.||.
T Consensus 117 --------------~~~~~~~~~~~~~p~-----------~~~-~~~~~~cg~~K~~~l~~~~~-~~~~~i~iGDg~~D~ 169 (214)
T TIGR03333 117 --------------EADFSNEYIHIDWPH-----------PCD-GTCQNQCGCCKPSLIRKLSE-PNDYHIVIGDSVTDV 169 (214)
T ss_pred --------------eeEeeCCeeEEeCCC-----------CCc-cccccCCCCCHHHHHHHHhh-cCCcEEEEeCCHHHH
Confidence 011122211100000 000 00001114589999998887 667789999999999
Q ss_pred hhhhhcceeEEecC-cchhHHhhcCceeecchhhHHHHHHHHh
Q 001023 892 SMIQMADVGVGISG-QEGRQAVMSSDFAMGQFRFLVTLLLVHG 933 (1185)
Q Consensus 892 ~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~f~~l~~lll~~G 933 (1185)
.|.+.||++++-.. .+-.+-...+.+.+.+|..+...|-.||
T Consensus 170 ~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~~~ 212 (214)
T TIGR03333 170 EAAKQSDLCFARDYLLNECEELGLNHAPFQDFYDVRKELENVK 212 (214)
T ss_pred HHHHhCCeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHHHh
Confidence 99999999776431 1111122234555666776666644443
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=97.99 E-value=3e-05 Score=82.94 Aligned_cols=118 Identities=19% Similarity=0.275 Sum_probs=80.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+.++++.|++.|+++.++||-....+..++...|+..--...+..+..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~--------------------------- 132 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEK--------------------------- 132 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCC---------------------------
Confidence 68999999999999999999999999999999999988863200000000000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhC---CCeEEEEcCCcC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGAN 889 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~---g~~vl~iGDG~N 889 (1185)
|. ..+ . .+-...|..|..+++.+.+.. ...+++|||+.|
T Consensus 133 ------------------g~-----~~p-------------~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~ 174 (201)
T TIGR01491 133 ------------------GF-----IQP-------------D--GIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKN 174 (201)
T ss_pred ------------------Ce-----Eec-------------c--eeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHh
Confidence 00 000 0 122234667887777765432 346999999999
Q ss_pred ChhhhhhcceeEEecCcchhHHhhcCc
Q 001023 890 DVSMIQMADVGVGISGQEGRQAVMSSD 916 (1185)
Q Consensus 890 Dv~mL~~AdVGIgisg~e~~qA~~aSD 916 (1185)
|++|++.|++++++.+.... ...|+|
T Consensus 175 D~~~a~~ag~~~a~~~~~~~-~~~a~~ 200 (201)
T TIGR01491 175 DLPMFEVADISISLGDEGHA-DYLAKD 200 (201)
T ss_pred HHHHHHhcCCeEEECCCccc-hhhccc
Confidence 99999999999999543322 555555
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.4e-05 Score=80.93 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=72.1
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCC
Q 001023 740 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819 (1185)
Q Consensus 740 e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1185)
..|..|+++|+++.++|+.....+..+...+|+..
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~--------------------------------------------- 75 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR--------------------------------------------- 75 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------------------------
Confidence 58999999999999999999999999999999842
Q ss_pred cCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhh
Q 001023 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQM 896 (1185)
Q Consensus 820 ~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~ 896 (1185)
.|....| |...++.+.+. ....|++|||+.||..|++.
T Consensus 76 -------------------------------------~f~~~kp--kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ 116 (169)
T TIGR02726 76 -------------------------------------FHEGIKK--KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR 116 (169)
T ss_pred -------------------------------------EEecCCC--CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH
Confidence 1111112 22233333222 23579999999999999999
Q ss_pred cceeEEecCcchhHHhhcCceeec
Q 001023 897 ADVGVGISGQEGRQAVMSSDFAMG 920 (1185)
Q Consensus 897 AdVGIgisg~e~~qA~~aSD~~i~ 920 (1185)
|++++++..... +.+.+||++..
T Consensus 117 ag~~~am~nA~~-~lk~~A~~I~~ 139 (169)
T TIGR02726 117 VGLAVAVGDAVA-DVKEAAAYVTT 139 (169)
T ss_pred CCCeEECcCchH-HHHHhCCEEcC
Confidence 999999965543 27788999874
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=97.96 E-value=8.3e-05 Score=83.02 Aligned_cols=185 Identities=21% Similarity=0.196 Sum_probs=100.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC----CCceEEE--------EeCCCHHHHHHHHHHHHHh
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKMTQVI--------INSNSKESCRKSLEDAIAM 800 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~----~~~~~~~--------i~~~~~~~~~~~~~~~~~~ 800 (1185)
++.+++.++|++|++.|+++.+.||.....+..+..+.++.. .+...+. ...-+.+..+..++...+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 478899999999999999999999999999999998887632 1111111 1112333444444333222
Q ss_pred hcccccCCCCC-CcccC--C------C--Cc------------CcCcEEEEEcCchhhhhccHHHHHHHHH--HhccCCe
Q 001023 801 SKKLKTVPGVS-HNSER--S------S--GA------------GVAQLALIIDGTSLVYILDSELDEQLFQ--LAGTCSV 855 (1185)
Q Consensus 801 ~~~~~~~~~~~-~~~~~--~------~--~~------------~~~~~~lvi~G~~l~~~l~~~~~~~~~~--l~~~~~~ 855 (1185)
........... ..... . . .. ...-..+.+.+..-. .+++...+.. ....+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 172 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPED---LDLLIEALNKLELEENVSV 172 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHH---HHHHHHHhhhhhhcCCEEE
Confidence 11100000000 00000 0 0 00 000011111111000 0111222211 0011111
Q ss_pred e----EEEecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 856 V----LCCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 856 v----i~~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
+ -+-.+.|. .|+.-++.+.+..+ ..++++||+.||++|++.|+.|+++..... .++..||++...
T Consensus 173 ~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~-~~k~~a~~~~~~ 246 (256)
T TIGR00099 173 VSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADE-ELKALADYVTDS 246 (256)
T ss_pred EEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchH-HHHHhCCEEecC
Confidence 1 13355655 59999999987533 579999999999999999999999944332 267789998764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.5e-05 Score=81.30 Aligned_cols=113 Identities=19% Similarity=0.219 Sum_probs=80.8
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCC
Q 001023 740 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819 (1185)
Q Consensus 740 e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1185)
..|+.|++.|+++.++||.....+..++++.|+..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~--------------------------------------------- 89 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH--------------------------------------------- 89 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------------------------
Confidence 68999999999999999999999999999988732
Q ss_pred cCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhh
Q 001023 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQM 896 (1185)
Q Consensus 820 ~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~ 896 (1185)
++. ..+.|...++.+.+.. ...|+||||+.||+.|++.
T Consensus 90 -------------------------------------~f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 90 -------------------------------------LYQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred -------------------------------------eec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 110 1123444444443323 3579999999999999999
Q ss_pred cceeEEecCcchhHHhhcCceeec------chhhHHHHH-HHHhhHHH
Q 001023 897 ADVGVGISGQEGRQAVMSSDFAMG------QFRFLVTLL-LVHGHWNY 937 (1185)
Q Consensus 897 AdVGIgisg~e~~qA~~aSD~~i~------~f~~l~~ll-l~~Gr~~~ 937 (1185)
|.+++++...+. .+...+|+++. ..+-+..++ ..-|+|-+
T Consensus 131 aG~~~~v~~~~~-~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~ 177 (183)
T PRK09484 131 VGLSVAVADAHP-LLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDE 177 (183)
T ss_pred CCCeEecCChhH-HHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhh
Confidence 999998854333 25677899985 345555443 45666643
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.93 E-value=7e-05 Score=81.76 Aligned_cols=133 Identities=23% Similarity=0.393 Sum_probs=84.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCc--eEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM--TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
++.||++++++.|++.|+++.++||.....+..+...+|+...+. ..+.++...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 478999999999999999999999999999999999998842110 000000000
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC-CeEEEEcCCcC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS-DMTLAIGDGAN 889 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g-~~vl~iGDG~N 889 (1185)
.+.|.... + ..|+ +..|...++.+++..+ ..+++|||+.|
T Consensus 140 -----------------~~~g~~~~---~-----------------~~~~--~~~K~~~i~~~~~~~~~~~~i~iGDs~~ 180 (224)
T PLN02954 140 -----------------EYAGFDEN---E-----------------PTSR--SGGKAEAVQHIKKKHGYKTMVMIGDGAT 180 (224)
T ss_pred -----------------cEECccCC---C-----------------cccC--CccHHHHHHHHHHHcCCCceEEEeCCHH
Confidence 00110000 0 0111 2347777777765333 57999999999
Q ss_pred Chhhhhh--cceeEEecCcc-hhHHhhcCceeecchhhHHHH
Q 001023 890 DVSMIQM--ADVGVGISGQE-GRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 890 Dv~mL~~--AdVGIgisg~e-~~qA~~aSD~~i~~f~~l~~l 928 (1185)
|+.|.++ ++++++..+.. .......+|+++.++.-+..+
T Consensus 181 Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 181 DLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred HHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 9999888 56655544321 111334589999887766543
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.77 E-value=9.3e-05 Score=78.22 Aligned_cols=113 Identities=17% Similarity=0.225 Sum_probs=74.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.+.++.|++.|+++.++|+.....+..+....|+..--.. + +....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~-i-~~~~~------------------------- 123 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE-I-YSNPA------------------------- 123 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE-E-eccCc-------------------------
Confidence 48999999999999999999999999999999998888887431111 1 11000
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhhC-CCeEEEEcCCcC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTRT-SDMTLAIGDGAN 889 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r-~sP~qKa~iV~~lk~~~-g~~vl~iGDG~N 889 (1185)
..++.-. +.. .-..|. .|.. .....|..+++.+++ . ...+++||||.|
T Consensus 124 ----------------~~~~~g~---~~~--------~~~~~~--~~~~~~~g~~K~~~~~~~~~-~~~~~~i~iGD~~~ 173 (188)
T TIGR01489 124 ----------------SFDNDGR---HIV--------WPHHCH--GCCSCPCGCCKGKVIHKLSE-PKYQHIIYIGDGVT 173 (188)
T ss_pred ----------------eECCCCc---EEE--------ecCCCC--ccCcCCCCCCHHHHHHHHHh-hcCceEEEECCCcc
Confidence 0000000 000 000011 2221 122369999999887 5 788999999999
Q ss_pred ChhhhhhcceeE
Q 001023 890 DVSMIQMADVGV 901 (1185)
Q Consensus 890 Dv~mL~~AdVGI 901 (1185)
|+.|.++||+-.
T Consensus 174 D~~aa~~~d~~~ 185 (188)
T TIGR01489 174 DVCPAKLSDVVF 185 (188)
T ss_pred hhchHhcCCccc
Confidence 999999998754
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0074 Score=72.91 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=72.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++++|+.+.+++++++|++++++|+=....+..++...|+.+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~------------------------------------- 114 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG------------------------------------- 114 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-------------------------------------
Confidence 4789999999999999999999999999999999999987321
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
++.++. .-++.|+.|...++..- ..+-+.++||..+|.+
T Consensus 115 ---------------Vigsd~------------------------~~~~kg~~K~~~l~~~l--~~~~~~yvGDS~~Dlp 153 (479)
T PRK08238 115 ---------------VFASDG------------------------TTNLKGAAKAAALVEAF--GERGFDYAGNSAADLP 153 (479)
T ss_pred ---------------EEeCCC------------------------ccccCCchHHHHHHHHh--CccCeeEecCCHHHHH
Confidence 111100 00244666766544221 1122578999999999
Q ss_pred hhhhcceeEEecCcch
Q 001023 893 MIQMADVGVGISGQEG 908 (1185)
Q Consensus 893 mL~~AdVGIgisg~e~ 908 (1185)
|.+.|+-.+.++...+
T Consensus 154 ~~~~A~~av~Vn~~~~ 169 (479)
T PRK08238 154 VWAAARRAIVVGASPG 169 (479)
T ss_pred HHHhCCCeEEECCCHH
Confidence 9999999999966543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00037 Score=76.98 Aligned_cols=43 Identities=12% Similarity=0.050 Sum_probs=38.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++..-+.+.++|++|+++||.|++.||-.......+..++++-
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 3446677999999999999999999999999999999999973
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00052 Score=76.66 Aligned_cols=40 Identities=20% Similarity=0.080 Sum_probs=36.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.-+.+.++|++|+++|+++.++||.....+..+.+++|+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4456899999999999999999999999999999999873
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00014 Score=78.08 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=78.1
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCC
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 809 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1185)
+..++.+++.+.|+.+++.|++++++||-....+..+++.+|+..--...+....+
T Consensus 84 ~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~------------------------ 139 (202)
T TIGR01490 84 IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED------------------------ 139 (202)
T ss_pred HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC------------------------
Confidence 35679999999999999999999999999999999999999884200000000000
Q ss_pred CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC---CeEEEEcC
Q 001023 810 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGD 886 (1185)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g---~~vl~iGD 886 (1185)
. ..+|+... -.+.++.|...++.+.+..+ ..++++||
T Consensus 140 -------------g----~~~g~~~~-----------------------~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gD 179 (202)
T TIGR01490 140 -------------G----IYTGNIDG-----------------------NNCKGEGKVHALAELLAEEQIDLKDSYAYGD 179 (202)
T ss_pred -------------C----EEeCCccC-----------------------CCCCChHHHHHHHHHHHHcCCCHHHcEeeeC
Confidence 0 11221100 01235678887776654233 36899999
Q ss_pred CcCChhhhhhcceeEEecCc
Q 001023 887 GANDVSMIQMADVGVGISGQ 906 (1185)
Q Consensus 887 G~NDv~mL~~AdVGIgisg~ 906 (1185)
+.+|.+|++.|+.++.+...
T Consensus 180 s~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 180 SISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred CcccHHHHHhCCCcEEeCCC
Confidence 99999999999999988654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00032 Score=77.98 Aligned_cols=175 Identities=13% Similarity=0.181 Sum_probs=95.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCC------ceEEEEeCCC-HHHH-HHHHHHHHHhhc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK------MTQVIINSNS-KESC-RKSLEDAIAMSK 802 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~------~~~~~i~~~~-~~~~-~~~~~~~~~~~~ 802 (1185)
..+..+.+.++|+++++.|+++.+.||-....+..+..+.++..++ ...+...+.. .+.. ...+........
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567789999999999999999999999999999999888876543 1222222110 1111 111100000000
Q ss_pred ccccCCCCCCcccCC-CCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE----ecCc--ccHHHHHHHHHh
Q 001023 803 KLKTVPGVSHNSERS-SGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC----RVAP--LQKAGIVALVKT 875 (1185)
Q Consensus 803 ~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~----r~sP--~qKa~iV~~lk~ 875 (1185)
..........+.... ......+..+..+.......+ .++.+.+......+..++.+ .+.| ..|..-++.+.+
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVI-KQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHH-HHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 000000000010000 001123333333322211111 22333333322233333333 4555 479999999877
Q ss_pred hC---CCeEEEEcCCcCChhhhhh-cceeEEecCc
Q 001023 876 RT---SDMTLAIGDGANDVSMIQM-ADVGVGISGQ 906 (1185)
Q Consensus 876 ~~---g~~vl~iGDG~NDv~mL~~-AdVGIgisg~ 906 (1185)
.. ...|+++||+.||++|++. +..||+|...
T Consensus 178 ~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 178 KLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred HcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence 53 4679999999999999998 6799999544
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00024 Score=77.28 Aligned_cols=135 Identities=13% Similarity=0.133 Sum_probs=82.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
+++||+.++++.|++.|+++.++||-....+..+.... +.. ...+..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~----------------------------- 121 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNG----------------------------- 121 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeE-----------------------------
Confidence 78999999999999999999999999988888888876 532 1111000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE--ecCcccHHHHHHHHHhhCCCeEEEEcCCcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC--RVAPLQKAGIVALVKTRTSDMTLAIGDGAND 890 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~--r~sP~qKa~iV~~lk~~~g~~vl~iGDG~ND 890 (1185)
...+|..+...... .....| ++ ...|..+++.++. ....+++||||.||
T Consensus 122 --------------~~~~~~~~~~~kp~-------------p~~~~~~~~~-~~~K~~~l~~~~~-~~~~~i~iGDs~~D 172 (219)
T PRK09552 122 --------------SDFSGEYITITWPH-------------PCDEHCQNHC-GCCKPSLIRKLSD-TNDFHIVIGDSITD 172 (219)
T ss_pred --------------EEecCCeeEEeccC-------------CccccccccC-CCchHHHHHHhcc-CCCCEEEEeCCHHH
Confidence 01122111100000 000000 01 2348888888776 56689999999999
Q ss_pred hhhhhhcceeEEecCc-chhHHhhcCceeecchhhHHHH
Q 001023 891 VSMIQMADVGVGISGQ-EGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdVGIgisg~-e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
..|.++||+.++...- +.......+.+.+.+|..+...
T Consensus 173 i~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 173 LEAAKQADKVFARDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred HHHHHHCCcceeHHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 9999999997763210 1100112355555666665444
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0004 Score=78.21 Aligned_cols=166 Identities=18% Similarity=0.186 Sum_probs=89.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC-----CCceEEEEe--------------CCCHHHHHHHH
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT-----SKMTQVIIN--------------SNSKESCRKSL 794 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~-----~~~~~~~i~--------------~~~~~~~~~~~ 794 (1185)
+-+.+.++|++|+++|+++++.||.....+..++.++|+-. .+...+... .-+.+.....+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 44678899999999999999999999999999999998731 222222211 11233333333
Q ss_pred HHHHHh-hcccccCCCCCC--------cc--c-CCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCee---EEE
Q 001023 795 EDAIAM-SKKLKTVPGVSH--------NS--E-RSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCC 859 (1185)
Q Consensus 795 ~~~~~~-~~~~~~~~~~~~--------~~--~-~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v---i~~ 859 (1185)
+...+. ........+... .. . ...........+.+.+.. ..+ .++.+.+... .+..+ -+-
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~l~~~--~~~~~~~~~~i 179 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSD--ERM-AQFTARLAEL--GLQFVQGARFW 179 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCH--HHH-HHHHHHHHHC--CCEEEecCeeE
Confidence 322211 000000000000 00 0 000000001112222211 000 1222222221 22211 244
Q ss_pred ecCc--ccHHHHHHHHHhhCC------CeEEEEcCCcCChhhhhhcceeEEec
Q 001023 860 RVAP--LQKAGIVALVKTRTS------DMTLAIGDGANDVSMIQMADVGVGIS 904 (1185)
Q Consensus 860 r~sP--~qKa~iV~~lk~~~g------~~vl~iGDG~NDv~mL~~AdVGIgis 904 (1185)
.++| -.|+.-++.+.++.| ..|+++|||.||++||+.|++||+|.
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~ 232 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK 232 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec
Confidence 6666 479999998876533 46999999999999999999999995
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00018 Score=75.25 Aligned_cols=40 Identities=20% Similarity=0.235 Sum_probs=37.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
+++|+++.++.|++.|++++++||.....+..++...|+.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 5799999999999999999999999999999999998874
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00098 Score=72.78 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=38.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+..-+++.++|++|+++|+++.++||-....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4556678999999999999999999999999999999999973
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0013 Score=80.66 Aligned_cols=47 Identities=6% Similarity=-0.073 Sum_probs=38.2
Q ss_pred Eeeecccc-cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 726 GASGIEDK-LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 726 G~~~ieD~-lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
|.+.=.|. .-+.+.++|+.|+++||++.+.||.....+..+++++++
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 44433333 335679999999999999999999999999999999886
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00038 Score=76.71 Aligned_cols=56 Identities=23% Similarity=0.293 Sum_probs=44.9
Q ss_pred ecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCc
Q 001023 860 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD 916 (1185)
Q Consensus 860 r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD 916 (1185)
.+.|. .|...++.+.++.| ..++++||+.||.+|++.|+.||++...... .+..||
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~-~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPE-LEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHH-HHHhhc
Confidence 45564 89999999977543 3689999999999999999999999655433 667788
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00026 Score=69.86 Aligned_cols=44 Identities=27% Similarity=0.303 Sum_probs=40.3
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
-..++.+++++++++|++.|++++++||.....+......+|+.
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 34588999999999999999999999999999999999998874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0065 Score=71.71 Aligned_cols=268 Identities=13% Similarity=0.212 Sum_probs=165.6
Q ss_pred HhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHH-------
Q 001023 716 SSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKE------- 788 (1185)
Q Consensus 716 ~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~------- 788 (1185)
+..-.+-+|.|++...-+.+.+....|+.|-+|-|+.+..+-.+.....-.|.+.||-....-.+.+..+...
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~p 888 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGP 888 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCC
Confidence 3334567899999999999999999999999999999999999999999999999997655544444433110
Q ss_pred ----------HHHHHHHHHHHh-hcc--cccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccH----------HHHHH
Q 001023 789 ----------SCRKSLEDAIAM-SKK--LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS----------ELDEQ 845 (1185)
Q Consensus 789 ----------~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~----------~~~~~ 845 (1185)
...+.++....+ ... ..-.++....-+- . -+|...-..+-++ ..+.|
T Consensus 889 a~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSf------q----~~dsdi~kf~ed~N~AkLPrGihnVRPH 958 (1354)
T KOG4383|consen 889 AHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISF------Q----KMDSDIAKFAEDPNIAKLPRGIHNVRPH 958 (1354)
T ss_pred CChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccc------c----ccccchhhhcCCCchhhcCcchhhcCcc
Confidence 111111111000 000 0000111000000 0 0000000000000 01111
Q ss_pred HHHHh---ccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCC--hhhhhhcceeEEecCcchhH----------
Q 001023 846 LFQLA---GTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND--VSMIQMADVGVGISGQEGRQ---------- 910 (1185)
Q Consensus 846 ~~~l~---~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~ND--v~mL~~AdVGIgisg~e~~q---------- 910 (1185)
+.++- .. +-.|-.++|+---+.++..|+ .|.+|+.+|..+|- ....-+|||+|++...+.-.
T Consensus 959 L~~iDNVPLL--V~LFTDcnpeamcEMIeIMQE-~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~as 1035 (1354)
T KOG4383|consen 959 LDEIDNVPLL--VGLFTDCNPEAMCEMIEIMQE-NGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVAS 1035 (1354)
T ss_pred cccccCccee--eeeccCCCHHHHHHHHHHHHH-cCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccch
Confidence 11110 01 126889999999999999999 89999999999994 44557899999885432210
Q ss_pred ---HhhcCc----eee--------cchhh-------HHHHHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhcc
Q 001023 911 ---AVMSSD----FAM--------GQFRF-------LVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFT 968 (1185)
Q Consensus 911 ---A~~aSD----~~i--------~~f~~-------l~~lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs 968 (1185)
...|+| ..| .+|+| +.+| ++..|....-+++.++|.++..+.+..++|+..++.
T Consensus 1036 sismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirL-Ie~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~--- 1111 (1354)
T KOG4383|consen 1036 SISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRL-IECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFF--- 1111 (1354)
T ss_pred hhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 112233 111 12333 2333 778888888899999999999999999999887765
Q ss_pred chhhhhHHHHHHHHHHhhhHHHHHhh-hccccCCh
Q 001023 969 LTTAINEWSSVLYSVIYTSLPTIVVA-ILDKDLSR 1002 (1185)
Q Consensus 969 ~~~~~~~~~l~~~n~i~t~lp~i~l~-~~d~d~~~ 1002 (1185)
.+++++.-.++|.+.+- +|.+++| +|.+..+.
T Consensus 1112 LP~i~s~sdii~lScfc--~PlL~i~tL~gk~~hk 1144 (1354)
T KOG4383|consen 1112 LPIIFSHSDIILLSCFC--IPLLFIGTLFGKFEHK 1144 (1354)
T ss_pred ccchhccchHHHHHHHH--HHHHHHHHHhcCCCcc
Confidence 56677777788877665 6888888 55544443
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0012 Score=74.41 Aligned_cols=50 Identities=16% Similarity=0.113 Sum_probs=41.6
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
|.+|+.- ...+-+++.++|++|++.|+++.+.||.....+..+..++|+.
T Consensus 12 DGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 12 DGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLE 61 (273)
T ss_pred cccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455531 3456678999999999999999999999999999999999974
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00072 Score=73.76 Aligned_cols=123 Identities=23% Similarity=0.317 Sum_probs=81.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
.++.+|+.+.++.|++.|+++.++||.....+..+....|+...-
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f----------------------------------- 136 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF----------------------------------- 136 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc-----------------------------------
Confidence 568899999999999999999999999999998998888874211
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh--CCCeEEEEcCCcC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAN 889 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~--~g~~vl~iGDG~N 889 (1185)
..++.+.. +.+..|... .+-+.+++. ....+++|||+.|
T Consensus 137 --------------~~~~~~~~------------------------~~~~kp~~~-~~~~~~~~~~~~~~~~i~igD~~~ 177 (226)
T PRK13222 137 --------------SVVIGGDS------------------------LPNKKPDPA-PLLLACEKLGLDPEEMLFVGDSRN 177 (226)
T ss_pred --------------cEEEcCCC------------------------CCCCCcChH-HHHHHHHHcCCChhheEEECCCHH
Confidence 01111110 011222211 111222221 4467999999999
Q ss_pred Chhhhhhcce-eEEec-Ccch--hHHhhcCceeecchhhHHHH
Q 001023 890 DVSMIQMADV-GVGIS-GQEG--RQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 890 Dv~mL~~AdV-GIgis-g~e~--~qA~~aSD~~i~~f~~l~~l 928 (1185)
|+.|.+.|++ +|++. |... ......+|+++.++.-+...
T Consensus 178 Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 178 DIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred HHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 9999999999 66763 3211 11334688999888877655
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0025 Score=68.40 Aligned_cols=169 Identities=21% Similarity=0.239 Sum_probs=86.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcC--ccCCCceEEEEeCC-----CHHHHHHHHHHHHHhhcccc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSK--LLTSKMTQVIINSN-----SKESCRKSLEDAIAMSKKLK 805 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~g--ll~~~~~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~ 805 (1185)
++-+.+.++|++|++.|+++.++||-....+..+....+ ++..+...+..... ..+..+..+... .. ....
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~ 94 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIK-EE-IGAE 94 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhh-hh-cCce
Confidence 477889999999999999999999999999998887633 33333333322111 011111111111 10 0000
Q ss_pred cCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhc---cCCee----EEEecCc--ccHHHHHHHHHhh
Q 001023 806 TVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAG---TCSVV----LCCRVAP--LQKAGIVALVKTR 876 (1185)
Q Consensus 806 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~---~~~~v----i~~r~sP--~qKa~iV~~lk~~ 876 (1185)
+............+.......+...+..........+...+..... .++.+ -+..+.| ..|...++.+.+.
T Consensus 95 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~ 174 (204)
T TIGR01484 95 LKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE 174 (204)
T ss_pred eeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH
Confidence 0000000000000001122222222210111111122222222211 01111 1234555 5899999988765
Q ss_pred CC---CeEEEEcCCcCChhhhhhcceeEEe
Q 001023 877 TS---DMTLAIGDGANDVSMIQMADVGVGI 903 (1185)
Q Consensus 877 ~g---~~vl~iGDG~NDv~mL~~AdVGIgi 903 (1185)
.+ ..++++||+.||.+|++.|++||+|
T Consensus 175 ~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 175 LNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred hCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 33 5699999999999999999999986
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0016 Score=70.88 Aligned_cols=121 Identities=24% Similarity=0.312 Sum_probs=84.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
+..+-+|++++++.|+++|++.-++|++....+..+....|+..-=
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---------------------------------- 132 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---------------------------------- 132 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc----------------------------------
Confidence 5678999999999999999999999999999999999998885311
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccH---HHHHHHHHhh--CCCeEEEEc
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK---AGIVALVKTR--TSDMTLAIG 885 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qK---a~iV~~lk~~--~g~~vl~iG 885 (1185)
..+ ++++..+..| ..+...+.+. ....++|||
T Consensus 133 ---------------~~i----------------------------~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VG 169 (220)
T COG0546 133 ---------------DVI----------------------------VGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVG 169 (220)
T ss_pred ---------------ceE----------------------------EcCCCCCCCCcCHHHHHHHHHHhCCChhheEEEC
Confidence 111 1212222222 3333333332 223799999
Q ss_pred CCcCChhhhhhccee-EEe-cCc--chhHHhhcCceeecchhhHHHH
Q 001023 886 DGANDVSMIQMADVG-VGI-SGQ--EGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 886 DG~NDv~mL~~AdVG-Igi-sg~--e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
|..+|..|=++|++. ||+ .|. ...-....+|+++.+..-|...
T Consensus 170 Ds~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 170 DSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHH
Confidence 999999999999844 344 222 1111556699999987776655
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0033 Score=68.46 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=34.5
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 737 GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 737 ~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+.++|+.|+++||++.+.||-....+..+...+++.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3889999999999999999999999999999999874
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.011 Score=66.18 Aligned_cols=173 Identities=7% Similarity=0.085 Sum_probs=93.5
Q ss_pred ccCCChHHHHHHHHH-cCCeEEEEcCCchhhHHHHHHHcCc--cCCCceEEE-------EeCCCHHHHHHHHHHHHHhhc
Q 001023 733 KLQQGVPEAIESLRA-AGIKVWVLTGDKQETAISIGYSSKL--LTSKMTQVI-------INSNSKESCRKSLEDAIAMSK 802 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~-aGIkv~mLTGD~~eTAi~Ia~~~gl--l~~~~~~~~-------i~~~~~~~~~~~~~~~~~~~~ 802 (1185)
.+-+++.++|++|++ .|++++++||...+.+..+....++ +..+...+. ...-+. +....+.+.+++..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~-~~~~~i~~~l~~~~ 114 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPD-AIARDISVQLHTAL 114 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCCh-hHHHHHHHHHHHHh
Confidence 455789999999998 7999999999999998887765552 222211111 111111 11122222222211
Q ss_pred ccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCC-ee-----EEEecCc--ccHHHHHHHHH
Q 001023 803 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCS-VV-----LCCRVAP--LQKAGIVALVK 874 (1185)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~-~v-----i~~r~sP--~qKa~iV~~lk 874 (1185)
.. . ....++ ....+++........ -++.+......+...+. .. -+-.+.| ..|+.-++.+.
T Consensus 115 ~~-~--pg~~ve-------~k~~~~~~h~r~~~~-~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll 183 (266)
T PRK10187 115 AQ-L--PGAELE-------AKGMAFALHYRQAPQ-HEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFM 183 (266)
T ss_pred cc-C--CCcEEE-------eCCcEEEEECCCCCc-cHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHH
Confidence 00 0 000111 122333333322211 01112222223222222 11 2234445 48999999876
Q ss_pred hhC---CCeEEEEcCCcCChhhhhhc----ceeEEecCcchhHHhhcCceeecch
Q 001023 875 TRT---SDMTLAIGDGANDVSMIQMA----DVGVGISGQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 875 ~~~---g~~vl~iGDG~NDv~mL~~A----dVGIgisg~e~~qA~~aSD~~i~~f 922 (1185)
+.. ...++++||+.||.+|++.+ +.||+|... ...|++.+.+-
T Consensus 184 ~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-----~~~A~~~l~~~ 233 (266)
T PRK10187 184 QEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-----ATQASWRLAGV 233 (266)
T ss_pred HhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-----CCcCeEeCCCH
Confidence 643 36799999999999999999 888888432 34578888763
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.017 Score=74.30 Aligned_cols=176 Identities=15% Similarity=0.124 Sum_probs=95.9
Q ss_pred cCCChHHHHHHHHH-cCCeEEEEcCCchhhHHHHHHHcC--ccCCCceEEEEeCCC-------HHHHHHHHHHHHHhhcc
Q 001023 734 LQQGVPEAIESLRA-AGIKVWVLTGDKQETAISIGYSSK--LLTSKMTQVIINSNS-------KESCRKSLEDAIAMSKK 803 (1185)
Q Consensus 734 lr~~v~e~I~~L~~-aGIkv~mLTGD~~eTAi~Ia~~~g--ll~~~~~~~~i~~~~-------~~~~~~~~~~~~~~~~~ 803 (1185)
+-+++.++|++|.+ .|+.|+++||.............+ ++..+...+...+.. ....++.+...++....
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVD 594 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHh
Confidence 56788899999999 699999999999988877654333 333332222211110 11123333333322221
Q ss_pred cccCCCCCCcccCCCCcCcCcEEEEEcCc----hhhhhccHHHHHHHHHHhccCCeeEE-----EecCc--ccHHHHHHH
Q 001023 804 LKTVPGVSHNSERSSGAGVAQLALIIDGT----SLVYILDSELDEQLFQLAGTCSVVLC-----CRVAP--LQKAGIVAL 872 (1185)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~----~l~~~l~~~~~~~~~~l~~~~~~vi~-----~r~sP--~qKa~iV~~ 872 (1185)
..- ...++ ....++...-. .+.....+++..++..+.......+. ..+.| -.|+..++.
T Consensus 595 ~~~---gs~ie-------~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ 664 (726)
T PRK14501 595 RTP---GSFIE-------EKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRR 664 (726)
T ss_pred cCC---CcEEE-------EcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHH
Confidence 110 00111 11223333211 11111112344444443322222221 24445 489999999
Q ss_pred HHhh-CCCeEEEEcCCcCChhhhhhc---ceeEEecCcchhHHhhcCceeecchhh
Q 001023 873 VKTR-TSDMTLAIGDGANDVSMIQMA---DVGVGISGQEGRQAVMSSDFAMGQFRF 924 (1185)
Q Consensus 873 lk~~-~g~~vl~iGDG~NDv~mL~~A---dVGIgisg~e~~qA~~aSD~~i~~f~~ 924 (1185)
+.+. ....++++||+.||..|++.+ ..||++.. +..+|++.+.+-.-
T Consensus 665 ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~-----~~s~A~~~l~~~~e 715 (726)
T PRK14501 665 LLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP-----GESRARYRLPSQRE 715 (726)
T ss_pred HHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECC-----CCCcceEeCCCHHH
Confidence 8874 335899999999999999997 46666633 33578898876443
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0047 Score=73.50 Aligned_cols=168 Identities=17% Similarity=0.145 Sum_probs=89.5
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceE------EEEeCC-CHH-HHHHHHHHHHHhh-cccccC
Q 001023 738 VPEAI-ESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ------VIINSN-SKE-SCRKSLEDAIAMS-KKLKTV 807 (1185)
Q Consensus 738 v~e~I-~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~------~~i~~~-~~~-~~~~~~~~~~~~~-~~~~~~ 807 (1185)
..+++ +++++.|+...+.||.....+..+.+..++..++.-+ +..... ..+ .....++...... ......
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 33444 8889999999999999999999999999988775211 111111 111 1111111000000 000000
Q ss_pred CC-CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCee----EEEecCcc--cHHHHHHHHHhhC---
Q 001023 808 PG-VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV----LCCRVAPL--QKAGIVALVKTRT--- 877 (1185)
Q Consensus 808 ~~-~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v----i~~r~sP~--qKa~iV~~lk~~~--- 877 (1185)
.- ....+... .....+..+..+.+.+... ..++.+.+......++.+ -+..+.|. .|+.-++.+.++.
T Consensus 113 ~~~~l~~q~~~-~~~~~Ki~~~~~~~~~~~~-~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~ 190 (413)
T PLN02382 113 KFPELKLQPET-EQRPHKVSFYVDKKKAQEV-IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAE 190 (413)
T ss_pred cCCCcccCCcc-cCCCeEEEEEechHHhHHH-HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhc
Confidence 00 00011110 0112333444443332221 223333333211122211 23466776 4999999997753
Q ss_pred C---CeEEEEcCCcCChhhhhhcc-eeEEecCcc
Q 001023 878 S---DMTLAIGDGANDVSMIQMAD-VGVGISGQE 907 (1185)
Q Consensus 878 g---~~vl~iGDG~NDv~mL~~Ad-VGIgisg~e 907 (1185)
| ..|+++||+.||..||+.|+ .||+|+...
T Consensus 191 gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~ 224 (413)
T PLN02382 191 GKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQ 224 (413)
T ss_pred CCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCc
Confidence 3 47999999999999999999 699995443
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0026 Score=71.69 Aligned_cols=42 Identities=14% Similarity=0.247 Sum_probs=36.5
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
+.++.+|+.++++.|++.|+++.++||-..+.+..+....|+
T Consensus 99 ~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 99 LTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred CCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 347889999999999999999999999888887777776666
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0025 Score=68.81 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++.|+++.++|+-....+..+....|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999888888888888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0056 Score=68.85 Aligned_cols=119 Identities=17% Similarity=0.255 Sum_probs=80.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.++++.|++.|+++.++|+...+.+..+-...||...
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~------------------------------------- 184 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL------------------------------------- 184 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh-------------------------------------
Confidence 6789999999999999999999999999999999888887421
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh--CCCeEEEEcCCcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAND 890 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~--~g~~vl~iGDG~ND 890 (1185)
+..+++++ ..+..+.-+.+.+++. ....+++|||+.+|
T Consensus 185 ------------F~~vi~~~----------------------------~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~D 224 (273)
T PRK13225 185 ------------FSVVQAGT----------------------------PILSKRRALSQLVAREGWQPAAVMYVGDETRD 224 (273)
T ss_pred ------------eEEEEecC----------------------------CCCCCHHHHHHHHHHhCcChhHEEEECCCHHH
Confidence 11122221 1111122223333331 34569999999999
Q ss_pred hhhhhhcceeE-Ee-cCcchhH--HhhcCceeecchhhHHHH
Q 001023 891 VSMIQMADVGV-GI-SGQEGRQ--AVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdVGI-gi-sg~e~~q--A~~aSD~~i~~f~~l~~l 928 (1185)
+.+-++|++-. ++ .|....+ ....+|+++.++.-+..+
T Consensus 225 i~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 225 VEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred HHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHH
Confidence 99999998874 44 3433221 223589999887776554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0031 Score=67.85 Aligned_cols=41 Identities=34% Similarity=0.430 Sum_probs=37.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++.|+++.++||.....+..+....|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 78899999999999999999999999888888887777774
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0057 Score=67.06 Aligned_cols=41 Identities=22% Similarity=0.115 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++.|+++.++|+.....+..+-...|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 67899999999999999999999999888777777777763
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.026 Score=60.88 Aligned_cols=111 Identities=14% Similarity=0.171 Sum_probs=75.4
Q ss_pred ccCCChHHHHH-HHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 733 KLQQGVPEAIE-SLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 733 ~lr~~v~e~I~-~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
.+.|++.++|+ .+++.|++++++|+=....+..+|+..+++... .++.....
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le-------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIE-------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeE--------------------------
Confidence 57999999995 889999999999999999999999886665421 22211100
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
+.+|..+ .--.|..++|..-++..-.......-+=||..||.
T Consensus 147 ----------------~~~gg~~----------------------~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~ 188 (210)
T TIGR01545 147 ----------------RGNGGWV----------------------LPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDN 188 (210)
T ss_pred ----------------EeCCceE----------------------cCccCCChHHHHHHHHHhCCChhheEEecCCcccH
Confidence 0121000 11123456787766543211234567899999999
Q ss_pred hhhhhcceeEEecCcch
Q 001023 892 SMIQMADVGVGISGQEG 908 (1185)
Q Consensus 892 ~mL~~AdVGIgisg~e~ 908 (1185)
|||+.||-.+.+++.+.
T Consensus 189 pmL~~a~~~~~Vnp~~~ 205 (210)
T TIGR01545 189 PLLAFCEHRWRVSKRGE 205 (210)
T ss_pred HHHHhCCCcEEECcchH
Confidence 99999999999976553
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.036 Score=61.46 Aligned_cols=49 Identities=20% Similarity=0.287 Sum_probs=40.3
Q ss_pred EecCc--ccHHHHHHHHHhhCCCeEEEEcC----CcCChhhhhhc-ceeEEecCcch
Q 001023 859 CRVAP--LQKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMA-DVGVGISGQEG 908 (1185)
Q Consensus 859 ~r~sP--~qKa~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~A-dVGIgisg~e~ 908 (1185)
..+.| -.|+.-++.+.+. ...|+++|| |-||.+||+.| -.|+++.+++.
T Consensus 180 leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~ 235 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPED 235 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHH
Confidence 34555 4899999999884 678999999 99999999987 68888877665
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.014 Score=63.20 Aligned_cols=41 Identities=20% Similarity=0.121 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|+++|+++.++||.....+..+-...|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47899999999999999999999999998888888888874
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.013 Score=65.56 Aligned_cols=122 Identities=11% Similarity=0.141 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+.++++.|++.|+++.++|+-....+..+-..+|+..--
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F------------------------------------ 152 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF------------------------------------ 152 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC------------------------------------
Confidence 57899999999999999999999999999998888888874311
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh--CCCeEEEEcCCcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAND 890 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~--~g~~vl~iGDG~ND 890 (1185)
..++.+.... +-.|. -..+...+++. ....+++|||..+|
T Consensus 153 -------------d~ii~~~d~~------------------------~~KP~-Pe~~~~a~~~l~~~p~~~l~IgDs~~D 194 (260)
T PLN03243 153 -------------SVVLAAEDVY------------------------RGKPD-PEMFMYAAERLGFIPERCIVFGNSNSS 194 (260)
T ss_pred -------------cEEEecccCC------------------------CCCCC-HHHHHHHHHHhCCChHHeEEEcCCHHH
Confidence 1122221110 01121 11111222221 34569999999999
Q ss_pred hhhhhhcceeE-EecCcchhHHhhcCceeecchhhHHHH
Q 001023 891 VSMIQMADVGV-GISGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdVGI-gisg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
+.+=++|++-+ ++.|.........+|+++.+++-+...
T Consensus 195 i~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 195 VEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred HHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHHH
Confidence 99999999854 665543333344689999888776544
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.011 Score=64.48 Aligned_cols=42 Identities=21% Similarity=0.200 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
-++-||+.++|+.|++.|+++.++||.....+..+....||.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 132 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLR 132 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcch
Confidence 478899999999999999999999999888888888888874
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.016 Score=64.48 Aligned_cols=46 Identities=11% Similarity=0.201 Sum_probs=41.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 777 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~ 777 (1185)
-+++||+++.++.|++.|+++.++||=-...+..+..+.|+...+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~ 165 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNV 165 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCc
Confidence 3679999999999999999999999999999999999999865543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0063 Score=60.18 Aligned_cols=96 Identities=16% Similarity=0.233 Sum_probs=71.2
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCC
Q 001023 740 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819 (1185)
Q Consensus 740 e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1185)
-.|+.|.++||+|-++||.+...+..=|+++|+-.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------------------------------------------- 76 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------------------------------------------- 76 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------------------------
Confidence 47999999999999999999999999999999831
Q ss_pred cCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhh
Q 001023 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQM 896 (1185)
Q Consensus 820 ~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~ 896 (1185)
+.-| -++|....+.+.+. .-.-|+.+||-.||.|+|..
T Consensus 77 --------~~qG-------------------------------~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 77 --------LYQG-------------------------------ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred --------eeec-------------------------------hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 1111 13455555444433 33579999999999999999
Q ss_pred cceeEEecCcchhHHhhcCceeec
Q 001023 897 ADVGVGISGQEGRQAVMSSDFAMG 920 (1185)
Q Consensus 897 AdVGIgisg~e~~qA~~aSD~~i~ 920 (1185)
...+++..+.... ..+.||++..
T Consensus 118 vGls~a~~dAh~~-v~~~a~~Vt~ 140 (170)
T COG1778 118 VGLSVAVADAHPL-LKQRADYVTS 140 (170)
T ss_pred cCCcccccccCHH-HHHhhHhhhh
Confidence 8888888554432 4566777763
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.06 Score=58.17 Aligned_cols=112 Identities=13% Similarity=0.145 Sum_probs=76.8
Q ss_pred ccCCChHHHH-HHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 733 KLQQGVPEAI-ESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 733 ~lr~~v~e~I-~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
.+.||+.++| +.|++.|++++++|+-....+..++...|+.. ...++....
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 5589999999 67899999999999999999999999988632 112221110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
....+|+- .--.|..+.|..-++..=.......-+=||..||.
T Consensus 147 --------------~~~~tg~~-----------------------~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~ 189 (211)
T PRK11590 147 --------------QRRYGGWV-----------------------LTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDN 189 (211)
T ss_pred --------------EEEEccEE-----------------------CCccCCChHHHHHHHHHhCCCcceEEEecCCcccH
Confidence 00112211 11224467888766543111334567899999999
Q ss_pred hhhhhcceeEEecCcchh
Q 001023 892 SMIQMADVGVGISGQEGR 909 (1185)
Q Consensus 892 ~mL~~AdVGIgisg~e~~ 909 (1185)
|||+.|+-.+.++.....
T Consensus 190 pmL~~a~~~~~vnp~~~l 207 (211)
T PRK11590 190 PLLYFCQHRWRVTPRGEL 207 (211)
T ss_pred HHHHhCCCCEEECccHHh
Confidence 999999999999776643
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.023 Score=59.19 Aligned_cols=156 Identities=20% Similarity=0.212 Sum_probs=93.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCC---HHHHHHHHHHHHHhhcccccCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNS---KESCRKSLEDAIAMSKKLKTVPG 809 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 809 (1185)
+|-||+.+++..|.+. ....+++---..-+..+|.-+|+...+..-..++.++ +++.+..+-...
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~----------- 150 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSII----------- 150 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhc-----------
Confidence 6779999999998875 4455555556667888998888866554333332221 222221211110
Q ss_pred CCCcccCCCCcCcCcEEEEEcCchhhhhccHHH----HHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC--CeEEE
Q 001023 810 VSHNSERSSGAGVAQLALIIDGTSLVYILDSEL----DEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS--DMTLA 883 (1185)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~----~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g--~~vl~ 883 (1185)
..--.++|..|-.-+++-+ ..+.-+++...++|-. ..|+.+++.+-+..+ .-.+.
T Consensus 151 --------------~~~~~~~geelfe~lDe~F~rLip~E~gki~~~vk~VGg-----g~ka~i~e~~~ele~~d~sa~~ 211 (315)
T COG4030 151 --------------DVIASLSGEELFEKLDELFSRLIPSEVGKIVESVKAVGG-----GEKAKIMEGYCELEGIDFSAVV 211 (315)
T ss_pred --------------CccccccHHHHHHHHHHHHhhcCHHHHHHHHHhhhhccC-----cchhHHHHHHHhhcCCCcceeE
Confidence 0011467776665555411 0122223322332211 457777776655322 34688
Q ss_pred EcCCcCChhhhhhcc----eeEEecCcchhHHhhcCceeecc
Q 001023 884 IGDGANDVSMIQMAD----VGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 884 iGDG~NDv~mL~~Ad----VGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
+||.+.|+.||+++. +.|+..|+|- |..-||+++..
T Consensus 212 VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvis 251 (315)
T COG4030 212 VGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVIS 251 (315)
T ss_pred ecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEec
Confidence 999999999999884 6677799998 99999999865
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.0033 Score=53.88 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=38.8
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhc
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQL 134 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~ 134 (1185)
.+.++++||+|.+...+.+.++ +.+++||.++..++++++++++++
T Consensus 16 v~~r~~~~G~N~l~~~~~~s~~---~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 16 AARRLERYGPNELPPPKKRSPL---LRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HHHHHHHhCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 3457899999999998754443 889999999999999999999876
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0017 Score=56.64 Aligned_cols=45 Identities=22% Similarity=0.314 Sum_probs=37.4
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHh
Q 001023 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLN 132 (1185)
Q Consensus 85 ~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~ 132 (1185)
+...|+++||+|.++..+...++ +.+++||.++++++++++++++
T Consensus 25 ev~~r~~~~G~N~l~~~~~~s~~---~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 25 EVEERRKKYGPNELPEPKKKSLW---RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHHHHSSSSTTTTTSSSHH---HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccccccccccCcHH---HHHHHHHHhHHHHHHHHHHHHC
Confidence 34457889999999777665554 8999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.049 Score=60.61 Aligned_cols=42 Identities=33% Similarity=0.304 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
++-||+.++++.|++.|+++.++||...+.+..+-...|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 567999999999999999999999999998888877777743
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.054 Score=58.83 Aligned_cols=40 Identities=18% Similarity=0.143 Sum_probs=33.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++.||+.++++.|+++|+++.++|+.....+..+-...|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999877666555455555
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.12 Score=60.18 Aligned_cols=67 Identities=16% Similarity=0.260 Sum_probs=45.8
Q ss_pred EecCc---ccHHHHHHHHHhhCC-----C-eEEEEcCCcCChhhhhh-----cceeEEecCcchhHHhhcCceeecchhh
Q 001023 859 CRVAP---LQKAGIVALVKTRTS-----D-MTLAIGDGANDVSMIQM-----ADVGVGISGQEGRQAVMSSDFAMGQFRF 924 (1185)
Q Consensus 859 ~r~sP---~qKa~iV~~lk~~~g-----~-~vl~iGDG~NDv~mL~~-----AdVGIgisg~e~~qA~~aSD~~i~~f~~ 924 (1185)
-.+.| -.|...|+.+.+..+ . .++++||+.||..|++. +++||.++.... .-.|++.+.+-.-
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~---~t~A~y~L~dp~e 368 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPK---ESNAFYSLRDPSE 368 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCC---CccceEEcCCHHH
Confidence 34556 399999998876533 1 35899999999999996 577887743221 1257888877444
Q ss_pred HHHH
Q 001023 925 LVTL 928 (1185)
Q Consensus 925 l~~l 928 (1185)
+..+
T Consensus 369 V~~~ 372 (384)
T PLN02580 369 VMEF 372 (384)
T ss_pred HHHH
Confidence 4444
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.044 Score=63.88 Aligned_cols=122 Identities=12% Similarity=0.148 Sum_probs=80.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
.+.+|+.++++.|+++|+++.++|+-..+.+..+-...||..-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y------------------------------------- 258 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF------------------------------------- 258 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH-------------------------------------
Confidence 4779999999999999999999999999999998888887421
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh--CCCeEEEEcCCcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDGAND 890 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~--~g~~vl~iGDG~ND 890 (1185)
+..++.+.... +-.|+.. .+...+++. ....++||||..+|
T Consensus 259 ------------Fd~Iv~sddv~------------------------~~KP~Pe-ifl~A~~~lgl~Peecl~IGDS~~D 301 (381)
T PLN02575 259 ------------FSVIVAAEDVY------------------------RGKPDPE-MFIYAAQLLNFIPERCIVFGNSNQT 301 (381)
T ss_pred ------------ceEEEecCcCC------------------------CCCCCHH-HHHHHHHHcCCCcccEEEEcCCHHH
Confidence 11122221110 1122211 111222221 45679999999999
Q ss_pred hhhhhhcceeE-EecCcchhHHhhcCceeecchhhHHHH
Q 001023 891 VSMIQMADVGV-GISGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdVGI-gisg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
+.|-+.|++-. ++.+.........+|+++.++.-+...
T Consensus 302 IeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~ 340 (381)
T PLN02575 302 VEAAHDARMKCVAVASKHPIYELGAADLVVRRLDELSIV 340 (381)
T ss_pred HHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHHHHHH
Confidence 99999999875 654322211234589999888876433
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.18 Score=55.77 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=48.4
Q ss_pred EEecCcccHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhc--------ceeEEecCcchhHHhhcCceeecchhhHH
Q 001023 858 CCRVAPLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMA--------DVGVGISGQEGRQAVMSSDFAMGQFRFLV 926 (1185)
Q Consensus 858 ~~r~sP~qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~A--------dVGIgisg~e~~qA~~aSD~~i~~f~~l~ 926 (1185)
-.+-.+..|...++.+.+.. ...++++||+.||..|++.+ ..||.+. ++. ....|++.+.+..-+.
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~--~g~-~~~~A~~~~~~~~~v~ 236 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG--SGS-KKTVAKFHLTGPQQVL 236 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe--cCC-cCCCceEeCCCHHHHH
Confidence 33445568999998887643 35799999999999999999 3666663 121 3456899998766554
Q ss_pred HH
Q 001023 927 TL 928 (1185)
Q Consensus 927 ~l 928 (1185)
.+
T Consensus 237 ~~ 238 (244)
T TIGR00685 237 EF 238 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.057 Score=65.72 Aligned_cols=121 Identities=10% Similarity=0.073 Sum_probs=79.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.++++.|++.|+++.++|+-..+.+..+-..+|+..--
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f------------------------------------ 373 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV------------------------------------ 373 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc------------------------------------
Confidence 78899999999999999999999999999999998888874310
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
..++.+.... ..-.|+ .+...+++.....+++|||..+|+.
T Consensus 374 -------------~~i~~~d~v~-----------------------~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~ 414 (459)
T PRK06698 374 -------------TETFSIEQIN-----------------------SLNKSD---LVKSILNKYDIKEAAVVGDRLSDIN 414 (459)
T ss_pred -------------ceeEecCCCC-----------------------CCCCcH---HHHHHHHhcCcceEEEEeCCHHHHH
Confidence 0111111100 000121 1222222223356999999999999
Q ss_pred hhhhccee-EEe-cCcchhHHhhcCceeecchhhHHHH
Q 001023 893 MIQMADVG-VGI-SGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 893 mL~~AdVG-Igi-sg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
+-+.|.+- |++ .|....+....+|+++.+++-+..+
T Consensus 415 aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 415 AAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred HHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHH
Confidence 99999984 455 2221111234589999888877665
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.07 Score=59.14 Aligned_cols=155 Identities=19% Similarity=0.224 Sum_probs=84.6
Q ss_pred HHHcCCeEEEEcCCchhhHHHHHHHcCccCCC-------ceEEEEeCCCHH-HHH---------HHHHHHHHhhcccccC
Q 001023 745 LRAAGIKVWVLTGDKQETAISIGYSSKLLTSK-------MTQVIINSNSKE-SCR---------KSLEDAIAMSKKLKTV 807 (1185)
Q Consensus 745 L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~-------~~~~~i~~~~~~-~~~---------~~~~~~~~~~~~~~~~ 807 (1185)
..+.++...++||-+.+.+..+..+.++..++ ..+..-..-..+ +-. ..+.+.+........+
T Consensus 31 ~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q 110 (247)
T PF05116_consen 31 QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGLRPQ 110 (247)
T ss_dssp HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEG
T ss_pred hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCcccC
Confidence 44778999999999999999999999986543 122220000111 111 1122222211111110
Q ss_pred CCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeE----EEecCc--ccHHHHHHHHHhhC---C
Q 001023 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL----CCRVAP--LQKAGIVALVKTRT---S 878 (1185)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi----~~r~sP--~qKa~iV~~lk~~~---g 878 (1185)
. .......+.+..++.......+ +++...+......|+.+. ...+.| ..|...|+.+++.. .
T Consensus 111 ~--------~~~q~~~k~sy~~~~~~~~~~~-~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~ 181 (247)
T PF05116_consen 111 P--------ESEQRPFKISYYVDPDDSADIL-EEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPP 181 (247)
T ss_dssp G--------CCCGCCTCECEEEETTSHCHHH-HHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--G
T ss_pred C--------ccccCCeeEEEEEecccchhHH-HHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCH
Confidence 0 0111233555666665544323 244444444444444321 234445 38999999999863 3
Q ss_pred CeEEEEcCCcCChhhhhhcceeEEecCcch
Q 001023 879 DMTLAIGDGANDVSMIQMADVGVGISGQEG 908 (1185)
Q Consensus 879 ~~vl~iGDG~NDv~mL~~AdVGIgisg~e~ 908 (1185)
..|+++||+.||.+||..++-||.+.+.+.
T Consensus 182 ~~vl~aGDSgND~~mL~~~~~~vvV~Na~~ 211 (247)
T PF05116_consen 182 EQVLVAGDSGNDLEMLEGGDHGVVVGNAQP 211 (247)
T ss_dssp GGEEEEESSGGGHHHHCCSSEEEE-TTS-H
T ss_pred HHEEEEeCCCCcHHHHcCcCCEEEEcCCCH
Confidence 578899999999999999999998866544
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.048 Score=59.25 Aligned_cols=42 Identities=33% Similarity=0.298 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.++.+|+++.++.|++.|+++.++||-..+.+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 489999999999999999999999999999998888888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.025 Score=60.42 Aligned_cols=44 Identities=23% Similarity=0.157 Sum_probs=39.4
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.++++.++++++++.|++.|+++.++||-....+..+-...|+.
T Consensus 103 ~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 103 IEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred hccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 35667888899999999999999999999999999999988874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.12 Score=58.01 Aligned_cols=41 Identities=32% Similarity=0.255 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++-||+.++++.|++.|+++.++||.....+..+-...|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56799999999999999999999999888777666665553
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.087 Score=55.00 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=32.0
Q ss_pred cCcEEEEeeeccc----ccCCChHHHHHHHHHcCCeEEEEcCCch
Q 001023 720 NNLCILGASGIED----KLQQGVPEAIESLRAAGIKVWVLTGDKQ 760 (1185)
Q Consensus 720 ~dl~llG~~~ieD----~lr~~v~e~I~~L~~aGIkv~mLTGD~~ 760 (1185)
+|.++.|-..+.+ ++.||++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 3666666544443 3689999999999999999999998653
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.052 Score=57.91 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++.+|+.++++.|++.|+++.++|+-..+.+..+....||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999888888788778886
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.079 Score=57.49 Aligned_cols=40 Identities=15% Similarity=0.203 Sum_probs=35.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++.||+.++++.|++.|++++++|+=....+.......|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999887777777777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.081 Score=52.39 Aligned_cols=41 Identities=24% Similarity=0.273 Sum_probs=34.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCc--------hhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDK--------QETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~--------~eTAi~Ia~~~gl 772 (1185)
-++.+++.++++.|+++|+++.++|+.. .+.+..+....|+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 4678999999999999999999999987 5666666666665
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.13 Score=57.23 Aligned_cols=41 Identities=20% Similarity=0.085 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.||+.++++.|++.|+++.++|+-....+..+-...||.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~ 148 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLS 148 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57899999999999999999999999999988888888874
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.082 Score=62.53 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=33.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHH-HcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY-SSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~-~~gl 772 (1185)
++.+|+.++++.|++.|+++.|+|+-....+...-. ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 567999999999999999999999988777665443 4555
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=94.95 E-value=0.05 Score=59.56 Aligned_cols=41 Identities=10% Similarity=0.169 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC----chhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGD----KQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD----~~eTAi~Ia~~~gll 773 (1185)
.+.+++.+.++.|++.|+++.++|+- ...++.++.+..|+.
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 44555999999999999999999997 667899998888884
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.13 Score=55.91 Aligned_cols=39 Identities=21% Similarity=0.170 Sum_probs=32.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++.+|+.++++.|+ +|+++.++|+...+.+...-.+.|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 47899999999999 6899999999887777766666666
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.11 Score=56.69 Aligned_cols=42 Identities=19% Similarity=0.157 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
-++.+|+.++++.|++.|+++.++|+-..+.+...-...|+.
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 367899999999999999999999998888877766666663
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.097 Score=59.41 Aligned_cols=37 Identities=30% Similarity=0.346 Sum_probs=31.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 769 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~ 769 (1185)
++.||+.++++.|++.|+++.++|+-..+.+..+-..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~ 180 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNT 180 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHH
Confidence 5789999999999999999999999877766655443
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.081 Score=57.88 Aligned_cols=42 Identities=10% Similarity=0.156 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCC----chhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGD----KQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD----~~eTAi~Ia~~~gll 773 (1185)
-.+.+|+.+.++.|++.|+++.++||- ...|+.++.+..|+-
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 457788999999999999999999995 356888888878883
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=94.66 E-value=1.2 Score=58.05 Aligned_cols=168 Identities=14% Similarity=0.160 Sum_probs=85.3
Q ss_pred CcEEEEeeecccccCCChHHHHHHH-HHcCCeEEEEcCCchhhHHHHHHHc---CccCCCceEEEEeCC-------C-HH
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESL-RAAGIKVWVLTGDKQETAISIGYSS---KLLTSKMTQVIINSN-------S-KE 788 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L-~~aGIkv~mLTGD~~eTAi~Ia~~~---gll~~~~~~~~i~~~-------~-~~ 788 (1185)
|.+|+-.....-.+-+++.+++++| ++.|+.|.++||...++....-..+ +++-++...+...+. . .+
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4455533222224556888899987 6679999999999999988776443 344444332221111 0 01
Q ss_pred H-HHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhh-h---ccHHHHHHHHHHhccCCeeE-----E
Q 001023 789 S-CRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVY-I---LDSELDEQLFQLAGTCSVVL-----C 858 (1185)
Q Consensus 789 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~-~---l~~~~~~~~~~l~~~~~~vi-----~ 858 (1185)
. .++.+....+.... ......++ ....+++.+-...+. . ...++..++..........+ +
T Consensus 684 ~~w~~~v~~i~~~y~e---rtpGs~IE-------~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~v 753 (854)
T PLN02205 684 CSWKQIAEPVMQLYTE---TTDGSTIE-------DKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNI 753 (854)
T ss_pred HHHHHHHHHHHHHHhc---CCCchhhe-------ecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcE
Confidence 1 11111111111110 00111111 234555554332211 0 01234444443332211111 1
Q ss_pred EecCc--ccHHHHHHHHHhh---CC---CeEEEEcCCcCChhhhhhcc
Q 001023 859 CRVAP--LQKAGIVALVKTR---TS---DMTLAIGDGANDVSMIQMAD 898 (1185)
Q Consensus 859 ~r~sP--~qKa~iV~~lk~~---~g---~~vl~iGDG~NDv~mL~~Ad 898 (1185)
-.+.| -.|+..++.+.+. .| ..|+++||+.||..|++.++
T Consensus 754 vEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~ 801 (854)
T PLN02205 754 VEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVIT 801 (854)
T ss_pred EEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhh
Confidence 22334 3799999988531 23 47999999999999999886
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.06 Score=56.58 Aligned_cols=39 Identities=18% Similarity=0.285 Sum_probs=30.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
.++.||+.++|+.|+++|+++.++|+.. .+..+....|+
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l 124 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGL 124 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCc
Confidence 3688999999999999999999999743 23445555555
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.096 Score=56.96 Aligned_cols=32 Identities=25% Similarity=0.418 Sum_probs=27.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETA 763 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTA 763 (1185)
-++.+|+.++|+.|++.|+++.++||-.....
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 35789999999999999999999998765543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.3 Score=51.33 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=35.4
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeE-Ee-cCcchh-HHhhcC--ceeecchhhHHHH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVGV-GI-SGQEGR-QAVMSS--DFAMGQFRFLVTL 928 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVGI-gi-sg~e~~-qA~~aS--D~~i~~f~~l~~l 928 (1185)
....++||||..+|+.+-+.|++.+ ++ .|.... .....+ |+++.++.-+..+
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 3467999999999999999999764 44 332111 112235 8888887776655
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.092 Score=54.07 Aligned_cols=44 Identities=23% Similarity=0.222 Sum_probs=40.4
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
-..++.+|+.+.++.|++.|++++++|+-..+.........|+.
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 46688999999999999999999999999999998999988885
|
... |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.14 E-value=0.21 Score=52.07 Aligned_cols=53 Identities=25% Similarity=0.233 Sum_probs=43.8
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCC-chhhHHHHHHHcCcc
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGD-KQETAISIGYSSKLL 773 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD-~~eTAi~Ia~~~gll 773 (1185)
+.......+-+-++.+|+.++++.|+++|+++.++|+- ..+.+..+-...|+-
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 44456666667788999999999999999999999964 888888887777763
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.19 Score=52.47 Aligned_cols=40 Identities=30% Similarity=0.319 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|+++|++++++|+-.... ..+...+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 688999999999999999999999977766 4444446663
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=93.83 E-value=0.11 Score=54.48 Aligned_cols=40 Identities=20% Similarity=0.209 Sum_probs=33.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
-++.||+.++++.|++.|+++.++|+- ..+..+-...|+.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 478999999999999999999999986 5566666666663
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.41 E-value=6.9 Score=45.56 Aligned_cols=189 Identities=11% Similarity=0.063 Sum_probs=97.9
Q ss_pred CcEEEEeeeccc--ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcC--ccCCCceEEEEeCCC----------
Q 001023 721 NLCILGASGIED--KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSK--LLTSKMTQVIINSNS---------- 786 (1185)
Q Consensus 721 dl~llG~~~ieD--~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~g--ll~~~~~~~~i~~~~---------- 786 (1185)
|.+|+-++.-.| .+-++..++|++|+ .|+++.++||...........-.+ ++..+...+.-....
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~~ 197 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQS 197 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceeccccccc
Confidence 666765554334 37789999999999 789999999999999887732111 111111111000000
Q ss_pred ----H-HHHHHHHHHH---HHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccC-----
Q 001023 787 ----K-ESCRKSLEDA---IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTC----- 853 (1185)
Q Consensus 787 ----~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~----- 853 (1185)
. .+-...++.. +.+... ......++ .+.+++.+.=.......-.++..++..++...
T Consensus 198 ~~~~~~~~~~~~i~~v~~~L~~~~~---~~pGa~VE-------~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v 267 (366)
T PLN03017 198 LLYQPANDYLPMIDEVYRQLLEKTK---STPGAKVE-------NHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKL 267 (366)
T ss_pred cccccchhhHHHHHHHHHHHHHHHh---cCCCCEEE-------ecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEE
Confidence 0 0000111111 111110 00011111 34556665544433221123333443333222
Q ss_pred ---CeeEEEecCc---ccHHHHHHHHHhhC------CCeEEEEcCCcCChhhhhhcc-----eeEEecCcchhHHhhcCc
Q 001023 854 ---SVVLCCRVAP---LQKAGIVALVKTRT------SDMTLAIGDGANDVSMIQMAD-----VGVGISGQEGRQAVMSSD 916 (1185)
Q Consensus 854 ---~~vi~~r~sP---~qKa~iV~~lk~~~------g~~vl~iGDG~NDv~mL~~Ad-----VGIgisg~e~~qA~~aSD 916 (1185)
+.| -.+.| -+|...++.+.+.. +..++++||...|-.|++..+ +||-++...+ .-+|+
T Consensus 268 ~~GkkV--lEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k---~T~A~ 342 (366)
T PLN03017 268 TQGRKV--FEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK---DTDAS 342 (366)
T ss_pred eCCCeE--EEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC---CCcce
Confidence 222 33444 49999999887642 236899999999999998763 4444432121 23688
Q ss_pred eeecchhhH
Q 001023 917 FAMGQFRFL 925 (1185)
Q Consensus 917 ~~i~~f~~l 925 (1185)
+.+.+-.-.
T Consensus 343 y~L~dp~eV 351 (366)
T PLN03017 343 YSLQDPSEV 351 (366)
T ss_pred EeCCCHHHH
Confidence 888764433
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.33 Score=52.67 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++. +++.++|+-..+.+..+..+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 6789999999999999 999999998888888888887774
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.18 E-value=0.41 Score=50.10 Aligned_cols=48 Identities=21% Similarity=0.224 Sum_probs=33.3
Q ss_pred CCeEEEEcCCcCChhhhhhccee--EEe-cCcchhH-HhhcCceeecchhhH
Q 001023 878 SDMTLAIGDGANDVSMIQMADVG--VGI-SGQEGRQ-AVMSSDFAMGQFRFL 925 (1185)
Q Consensus 878 g~~vl~iGDG~NDv~mL~~AdVG--Igi-sg~e~~q-A~~aSD~~i~~f~~l 925 (1185)
...++||||...|+.+=++|++. |++ .|..... ....+|+++.++.-|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 46789999999999999999985 355 3432111 123489988776544
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.52 Score=48.34 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=31.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHH
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAI 764 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi 764 (1185)
+|.+.+++.++++++++.|+++.++||-....+.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~ 58 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQAD 58 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHH
Confidence 5788999999999999999999999999887764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=92.62 E-value=2.3 Score=47.12 Aligned_cols=50 Identities=20% Similarity=0.339 Sum_probs=41.1
Q ss_pred EEecCcc--cHHHHHHHHHhhCCCeEEEEcC----CcCChhhhhh-cceeEEecCcchh
Q 001023 858 CCRVAPL--QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQM-ADVGVGISGQEGR 909 (1185)
Q Consensus 858 ~~r~sP~--qKa~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~-AdVGIgisg~e~~ 909 (1185)
+..+.|. .|+.-++.|+ ...-|+++|| |.||.+||+. -=+|+.++|-+..
T Consensus 180 ~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~~ 236 (245)
T PLN02423 180 SFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDDT 236 (245)
T ss_pred EEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHHH
Confidence 4455554 7999999998 5678999999 9999999996 7788999887653
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.2 Score=57.27 Aligned_cols=44 Identities=23% Similarity=0.173 Sum_probs=40.6
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
..+++.+++.++|+.|++.|+++.++||-...++..+...+++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 57899999999999999999999999999999999888888774
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=92.36 E-value=0.46 Score=49.42 Aligned_cols=41 Identities=20% Similarity=0.349 Sum_probs=33.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCc-hhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDK-QETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~-~eTAi~Ia~~~gl 772 (1185)
.++-++++++++.|++.|+++.++|+-. ...+..+...+|+
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 3678999999999999999999999977 4556666666554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=91.79 E-value=0.45 Score=50.87 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=30.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++-+|+.++++.|+++|+++.++|+-.. .+..+....|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCc
Confidence 6789999999999999999999997544 33455555555
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.4 Score=48.54 Aligned_cols=27 Identities=41% Similarity=0.550 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDK 759 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~ 759 (1185)
++.||+.++++.|++.|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999865
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=90.99 E-value=0.61 Score=46.03 Aligned_cols=39 Identities=8% Similarity=0.103 Sum_probs=32.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC-chhhHHHHHHHcC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGD-KQETAISIGYSSK 771 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD-~~eTAi~Ia~~~g 771 (1185)
++.+|+.++++.|+++|+++.++|+- ..+.+..+-+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999998 6666666555444
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=90.61 E-value=1.1 Score=49.84 Aligned_cols=43 Identities=9% Similarity=0.169 Sum_probs=32.5
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhh---HHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQET---AISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eT---Ai~Ia~~~gll 773 (1185)
+.++-+|+.+.++.|++.|+++.++|+-.... +...-...|+.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 55678999999999999999999999976433 33344445653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=90.53 E-value=10 Score=42.01 Aligned_cols=49 Identities=12% Similarity=0.060 Sum_probs=38.8
Q ss_pred EeeecccccCCChHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccC
Q 001023 726 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLT 774 (1185)
Q Consensus 726 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTG---D~~eTAi~Ia~~~gll~ 774 (1185)
|.+.-.+++=+++.++|+.|++.|++++++|| ...+.......+.|+-.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44445567778999999999999999999997 55777777777788743
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.79 Score=46.85 Aligned_cols=35 Identities=17% Similarity=0.385 Sum_probs=29.3
Q ss_pred ccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcce
Q 001023 864 LQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADV 899 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdV 899 (1185)
.+|..+|+.+++ +...+.+||||+-|+.|-+.+|+
T Consensus 146 ~dK~~vI~~l~e-~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 146 HDKSSVIHELSE-PNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred CCcchhHHHhhc-CCceEEEecCCcccccHhhhhhh
Confidence 489999999999 78889999999999876555444
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=90.46 E-value=8 Score=43.14 Aligned_cols=48 Identities=27% Similarity=0.288 Sum_probs=36.7
Q ss_pred Eeeecccc----cCCChHHHHHHHHHcCCeEEEEcCCchhh---HHHHHHHcCcc
Q 001023 726 GASGIEDK----LQQGVPEAIESLRAAGIKVWVLTGDKQET---AISIGYSSKLL 773 (1185)
Q Consensus 726 G~~~ieD~----lr~~v~e~I~~L~~aGIkv~mLTGD~~eT---Ai~Ia~~~gll 773 (1185)
|.+.-.+. +=+++.++|+.|+++|++++++||....+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999987776 44445556763
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=90.21 E-value=0.66 Score=47.06 Aligned_cols=40 Identities=18% Similarity=0.318 Sum_probs=33.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 770 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~ 770 (1185)
+.+..+|+.++++.|++.|+++.++|+-..+.+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 4455689999999999999999999998888877665543
|
HAD subfamilies caused by an overly broad single model. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=90.18 E-value=0.41 Score=48.57 Aligned_cols=42 Identities=17% Similarity=0.025 Sum_probs=36.7
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
..-+++||+.|.++.|+ .++++.+.|.=..+.|..+-..+++
T Consensus 42 ~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 42 VYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 34478999999999999 5799999999999999998877776
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=89.62 E-value=0.98 Score=52.51 Aligned_cols=26 Identities=31% Similarity=0.394 Sum_probs=24.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTG 757 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTG 757 (1185)
-++.||+.++++.|+++|+++.++|+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTN 54 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTN 54 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEEC
Confidence 46789999999999999999999998
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=89.46 E-value=6 Score=45.87 Aligned_cols=223 Identities=10% Similarity=0.077 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh---------ccCcEEEEeeecccc--cCCChHHHHHHHHHcCCeEEEEc
Q 001023 688 SEFEQWQSSFEAASNALFGRAALLRKVASSV---------ENNLCILGASGIEDK--LQQGVPEAIESLRAAGIKVWVLT 756 (1185)
Q Consensus 688 ~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~i---------E~dl~llG~~~ieD~--lr~~v~e~I~~L~~aGIkv~mLT 756 (1185)
++|..|..++-.|...+. ++.... .-|.+|+-+.---|. +-++..++|+.|. .+..|.++|
T Consensus 71 ~~~~~w~~~~p~a~~~~~-------~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvS 142 (354)
T PLN02151 71 NKQSCWIKEHPSALNMFE-------EILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVS 142 (354)
T ss_pred hhHHHHHHhCChHHHHHH-------HHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEE
Confidence 578899988877765432 222222 223333332223333 5678888999999 567999999
Q ss_pred CCchhhHHHHHHHcCc--cC-CCceEEEEeCC-------------CHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCc
Q 001023 757 GDKQETAISIGYSSKL--LT-SKMTQVIINSN-------------SKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 820 (1185)
Q Consensus 757 GD~~eTAi~Ia~~~gl--l~-~~~~~~~i~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1185)
|...........-.++ .. .++........ ...+....++.................++
T Consensus 143 GR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE------ 216 (354)
T PLN02151 143 GRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVE------ 216 (354)
T ss_pred CCCHHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEE------
Confidence 9999888776532222 11 11111100000 00000111111111110000000011111
Q ss_pred CcCcEEEEEcCchhhhhccHHHHHHHHHHhcc--------CCeeEEEecC-cccHHHHHHHHHhhCC------CeEEEEc
Q 001023 821 GVAQLALIIDGTSLVYILDSELDEQLFQLAGT--------CSVVLCCRVA-PLQKAGIVALVKTRTS------DMTLAIG 885 (1185)
Q Consensus 821 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~--------~~~vi~~r~s-P~qKa~iV~~lk~~~g------~~vl~iG 885 (1185)
.+.+++.+.=.....-...++..++..++.. .+.|+=-|-. .-+|...|+.+.+..+ ..++++|
T Consensus 217 -~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiG 295 (354)
T PLN02151 217 -NNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIG 295 (354)
T ss_pred -ecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEc
Confidence 3445555544333211111233333333322 2333333332 3499999998876422 2589999
Q ss_pred CCcCChhhhhhc-----ceeEEecCcchhHHhhcCceeecchhhHHHH
Q 001023 886 DGANDVSMIQMA-----DVGVGISGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 886 DG~NDv~mL~~A-----dVGIgisg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
|-..|-.|++.. ++||-++...+ .-.|++.+.+-.-+..+
T Consensus 296 DD~TDEDaF~~L~~~~~G~gI~Vg~~~k---~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 296 DDRTDEDAFKILRDKKQGLGILVSKYAK---ETNASYSLQEPDEVMEF 340 (354)
T ss_pred CCCcHHHHHHHHhhcCCCccEEeccCCC---CCcceEeCCCHHHHHHH
Confidence 999999999864 44444431111 12688888774444333
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=88.85 E-value=0.65 Score=50.00 Aligned_cols=30 Identities=33% Similarity=0.439 Sum_probs=26.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchh
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQE 761 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~e 761 (1185)
-++.+|+.++++.|++.|+++.++|+....
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 367899999999999999999999986543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.82 E-value=3.1 Score=42.25 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=39.2
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
|-+|+..- ..+.-|++.+=++.++.+||++.+++.-+...+...+..+|+
T Consensus 36 DNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 36 DNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred cCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 33444432 344567788888999999999999999888888888888887
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=87.63 E-value=2.2 Score=46.41 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=32.4
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHH
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY 768 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~ 768 (1185)
++-++.+|+.++++.|+++|+++.++|.........+-.
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~ 130 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFG 130 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh
Confidence 345799999999999999999999999987766555543
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=87.62 E-value=1.1 Score=46.09 Aligned_cols=26 Identities=31% Similarity=0.511 Sum_probs=23.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGD 758 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD 758 (1185)
++-+|+.++++.|++.|+++.++|.-
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999999999999999999974
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.89 E-value=1 Score=48.92 Aligned_cols=39 Identities=13% Similarity=0.092 Sum_probs=30.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
-++.+|++++++.| ++++.++|+...+.+...-...|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 45678999999998 4999999998877776665556663
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=86.61 E-value=2.5 Score=46.66 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=36.4
Q ss_pred EeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHH--HHHHHcCc
Q 001023 726 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAI--SIGYSSKL 772 (1185)
Q Consensus 726 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi--~Ia~~~gl 772 (1185)
|.+.-.+++-||++++++.|+++|+++.++|.-....+. ....+.|+
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl 65 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGI 65 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCC
Confidence 566667888999999999999999999999995443333 34456666
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=86.34 E-value=2.8 Score=56.26 Aligned_cols=41 Identities=20% Similarity=0.071 Sum_probs=36.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+.+|+.+.++.|+++|+++.++|+-..+.+..+-.+.|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 46799999999999999999999998888888777777774
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=86.16 E-value=2 Score=44.53 Aligned_cols=26 Identities=23% Similarity=0.492 Sum_probs=23.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDK 759 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~ 759 (1185)
+-+|+.++++.|+++|+++.++|.-.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~ 68 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQS 68 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 34999999999999999999999744
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.97 E-value=9.4 Score=40.51 Aligned_cols=37 Identities=14% Similarity=0.195 Sum_probs=30.0
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 737 GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 737 ~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+.+.+..|+++|..|+.+|.-....-...-.++|+-
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999987766666666777764
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=83.25 E-value=3 Score=45.52 Aligned_cols=41 Identities=15% Similarity=0.182 Sum_probs=33.8
Q ss_pred ccCCChHHHHHHH--HHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESL--RAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L--~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
|+.+|.+++++.+ ++.|+.+.++|-=+.---..|-+.-||-
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~ 113 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLR 113 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCc
Confidence 6789999999999 4589999999988877666676777764
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=83.20 E-value=2.4 Score=49.00 Aligned_cols=37 Identities=16% Similarity=0.270 Sum_probs=32.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 769 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~ 769 (1185)
++-+|+.++|+.|++.|+++.++|.-..+.|..+-..
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 4568999999999999999999999998888887665
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.56 E-value=5.6 Score=42.33 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=26.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhh
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQET 762 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eT 762 (1185)
++.+|+.++++.|+++|+++.++|.-....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 478999999999999999999999965543
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=81.13 E-value=1.7 Score=41.02 Aligned_cols=48 Identities=21% Similarity=0.208 Sum_probs=36.3
Q ss_pred EeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHH---HHcCcc
Q 001023 726 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG---YSSKLL 773 (1185)
Q Consensus 726 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia---~~~gll 773 (1185)
|++...+++=||++|+|+.|+++|++++++|.....+...++ ...|+-
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 566668889999999999999999999999998866654444 455653
|
... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=80.02 E-value=5.2 Score=42.43 Aligned_cols=38 Identities=16% Similarity=0.189 Sum_probs=26.3
Q ss_pred HHHHHHHHHhhCC-CeEEEEcCCcCChhhhhhc--ceeE-Ee
Q 001023 866 KAGIVALVKTRTS-DMTLAIGDGANDVSMIQMA--DVGV-GI 903 (1185)
Q Consensus 866 Ka~iV~~lk~~~g-~~vl~iGDG~NDv~mL~~A--dVGI-gi 903 (1185)
|..++..+.+..| ..+++|||..+|+.+-++| +|-. ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 4444443333233 4588999999999999999 8865 44
|
2 hypothetical protein; Provisional |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1185 | ||||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 7e-09 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-08 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-08 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 3e-07 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-05 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-05 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-04 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 4e-04 |
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1185 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 7e-30 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 6e-29 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 6e-27 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 2e-21 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-18 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 9e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-05 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-05 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-05 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 4e-05 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 4e-05 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 5e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 9e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 1e-04 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 2e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 2e-04 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 2e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 4e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 7e-30
Identities = 95/465 (20%), Positives = 147/465 (31%), Gaps = 125/465 (26%)
Query: 465 SDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLL 524
SDKTGTLT+N+M + +W +H + G+
Sbjct: 385 SDKTGTLTQNRM--TVSHLW--------FDNHIHSADTTEDQSGQTFDQS-----SETWR 429
Query: 525 QLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAA 584
L R CN V G+ E AL+ +
Sbjct: 430 ALCRVL----------------TLCNRAA-FKSGQDAVPVPKRIVIGD-ASETALLKFSE 471
Query: 585 AYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKT---VTLFVK 641
+ G R+ RF + F+S K I L D L +K
Sbjct: 472 LTL------------GNAMGYRE-RFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMK 518
Query: 642 GA--------DTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQW 693
GA + + L+ ++ + LG R L LS ++
Sbjct: 519 GAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPG 578
Query: 694 QSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVW 753
+ A N + L G + D + VP+A+ R AGI+V
Sbjct: 579 YAFDVEAMNF--------------PTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVI 624
Query: 754 VLTGDKQETAISIGYSSKLLTSKMTQV-IINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812
++TGD TA +I V II+ S+ + + + + +
Sbjct: 625 MVTGDHPITAKAIA----------ASVGIISEGSETVEDIAARLRVPVDQVNRKDAR--- 671
Query: 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--------- 863
A +I+G L + SEL E L ++ R +P
Sbjct: 672 -------------ACVINGMQLKDMDPSELVEALRTH----PEMVFARTSPQQKLVIVES 714
Query: 864 LQKAG-IVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GISG 905
Q+ G IVA +T GDG ND ++ AD+GV GI+G
Sbjct: 715 CQRLGAIVA--------VT---GDGVNDSPALKKADIGVAMGIAG 748
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 6e-29
Identities = 94/470 (20%), Positives = 151/470 (32%), Gaps = 135/470 (28%)
Query: 465 SDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNV-DPHL 523
SDKTGTLT+N+M A +W + + D + +
Sbjct: 380 SDKTGTLTQNRM--TVAHMW---FDNQ-----------IHEADTTENQSGAAFDKTSATW 423
Query: 524 LQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAA 583
LSR A CN V + + G+ E AL+
Sbjct: 424 SALSRIA----------------ALCNRAV-FQAGQDNVPILKRSVAGD-ASESALLKCI 465
Query: 584 AAYGFMLIERTSGHIVIDIQGQRQS--RFNVLGLHE--FDSDRKRMSVI---LGLPDKTV 636
+QG R + + E F+S K I +
Sbjct: 466 ELCC------------GSVQGMRDRNPK-----IVEIPFNSTNKYQLSIHENEKSSESRY 508
Query: 637 TLFVKGA--------DTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS 688
L +KGA T + + + L ++ ++ LG R L L
Sbjct: 509 LLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPED 568
Query: 689 EFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAA 748
++ + N +LC +G + D + VP+A+ R+A
Sbjct: 569 KYNEGYPFDADEPNF--------------PTTDLCFVGLMAMIDPPRAAVPDAVGKCRSA 614
Query: 749 GIKVWVLTGDKQETAISIGYSSKLLTSKMTQV-IINSNSKESCRKSLEDAIAMSKKLKTV 807
GIKV ++TGD TA +I V II+ ++ + I + +
Sbjct: 615 GIKVIMVTGDHPITAKAIA----------KGVGIISEGNETIEDIAARLNIPIGQVNPRD 664
Query: 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP---- 863
A ++ G+ L + LD+ L + ++ R +P
Sbjct: 665 AK----------------ACVVHGSDLKDLSTEVLDDILHYH----TEIVFARTSPQQKL 704
Query: 864 -----LQKAG-IVALVKTRTSDMTLAIGDGANDVSMIQMADVGV--GISG 905
Q+ G IVA +T GDG ND ++ AD+GV GISG
Sbjct: 705 IIVEGCQRQGAIVA--------VT---GDGVNDSPALKKADIGVAMGISG 743
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 6e-27
Identities = 89/465 (19%), Positives = 142/465 (30%), Gaps = 124/465 (26%)
Query: 465 SDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLL 524
SDKTGTLT N+M ++ ID G+ S +E + G P+ V + +
Sbjct: 351 SDKTGTLTTNQM--SVCKMFIIDKVDGDFCSLNE-----FSITGSTYAPEGEVLKNDKPI 403
Query: 525 QLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAA 584
+ + + + A CN L + + + V GE E AL
Sbjct: 404 -------RSGQFDGLVELATICALCNDSS-LDFNETKGVYEKV---GE-ATETALTTLVE 451
Query: 585 AYGFMLIERTSGHIVIDIQGQR---QSRFNVLGLHEFDSDRKRMSVILGLPDKTV----- 636
E + V + EF DRK MSV +
Sbjct: 452 KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGN 511
Query: 637 TLFVKGA--------DTSMFSVIAKALNMNVIRGTESHLHAYSSL--GLRTLVVGMRELS 686
+FVKGA + + V S + + + LR L + R+
Sbjct: 512 KMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTP 571
Query: 687 ASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLR 746
E E +L +G G+ D ++ V +I+ R
Sbjct: 572 PKREEMVLDDSSRFME---------------YETDLTFVGVVGMLDPPRKEVMGSIQLCR 616
Query: 747 AAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKT 806
AGI+V ++TGD + TAI+I ++ I ++E ++
Sbjct: 617 DAGIRVIMITGDNKGTAIAIC----------RRIGIFGENEEVADRAY------------ 654
Query: 807 VPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--- 863
+G L + + RV P
Sbjct: 655 -----------TGREFDDLP----------------LAEQREACRRACCF--ARVEPSHK 685
Query: 864 ------LQKAG-IVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 901
LQ I A MT GDG ND ++ A++G+
Sbjct: 686 SKIVEYLQSYDEITA--------MT---GDGVNDAPALKKAEIGI 719
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 2e-21
Identities = 108/731 (14%), Positives = 205/731 (28%), Gaps = 242/731 (33%)
Query: 455 EDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPK 514
E++ + + SDKTGTLT N K
Sbjct: 318 EEMAGMDVLCSDKTGTLTLN---------------------------------------K 338
Query: 515 LTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESP 574
L+V D +L+++ G ++ L AA + + +
Sbjct: 339 LSV--DKNLVEVFCKGVEKDQ-------VLLFAAMAS----------------RVENQDA 373
Query: 575 DEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDK 634
+ A+V A + + F+ KR ++
Sbjct: 374 IDAAMVGMLADPKEAR-----------------AGIREVHFLPFNPVDKRTALTYIDGSG 416
Query: 635 TVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQ 694
KGA + + + ++ + S + Y+ GLR+L V + + E
Sbjct: 417 NWHRVSKGAPEQILELAK--ASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKE--- 471
Query: 695 SSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWV 754
S +G + D + E I G+ V +
Sbjct: 472 ----------------------SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKM 509
Query: 755 LTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRK-SLEDAIAMSKKLKTVPGVSHN 813
+TGD+ R+ + + S L
Sbjct: 510 ITGDQLAIGKET-----------------------GRRLGMGTNMYPSSALLG------- 539
Query: 814 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV 873
A LA + +L V P K IV +
Sbjct: 540 -----THKDANLA----------------SIPVEELIEKADGF--AGVFPEHKYEIVKKL 576
Query: 874 KTR--TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG---------QF 922
+ R MT GDG ND ++ AD+G+ ++ ++D A G
Sbjct: 577 QERKHIVGMT---GDGVNDAPALKKADIGIAVAD--------ATDAARGASDIVLTEPGL 625
Query: 923 RFLVTLLLVHGHWNYQRMGYMILY----NFYRNAVLVFV--LFWYVLFTAFTLTTAINEW 976
+++ +L +QRM +Y R + L W F+AF + I
Sbjct: 626 SVIISAVL-TSRAIFQRMKNYTIYAVSITI-RIVFGFMLIALIWEFDFSAFMVLI-IA-- 680
Query: 977 SSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQ 1036
I + ++ S P + + K + T +
Sbjct: 681 -------ILNDGTIMTISKDRVKPSPT-----P---------DSWKLKEIFATG---VVL 716
Query: 1037 SVVIFFIPFGAYW--DSTIDVSSIGDLWTLA-----------VVILVNIHLAMDVIR--- 1080
+ +W T S + ++ + + + + V R
Sbjct: 717 GGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTRSRS 776
Query: 1081 WTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRF 1140
W+++ +IA LI +I + ++ W F ++ + W +I + +++ F
Sbjct: 777 WSFVERPGAL-LMIAFLI-AQLIATLIAVYANWEFAKI--RGIGWGWAGVIWLYSIVTYF 832
Query: 1141 LV---KFLYQY 1148
+ KF +Y
Sbjct: 833 PLDVFKFAIRY 843
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 90.5 bits (225), Expect = 2e-18
Identities = 88/622 (14%), Positives = 186/622 (29%), Gaps = 170/622 (27%)
Query: 570 QGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVIL 629
+G ++A + + Y S++ VL H FD K++ ++
Sbjct: 417 KGIDAIDKAFLKSLKYYP--------------RAKSVLSKYKVLQFHPFDPVSKKVVAVV 462
Query: 630 GLPDKTVTLFVKGADTSMFSVI--AKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSA 687
P VKGA + + + V + ++ + +++ G R+L V +
Sbjct: 463 ESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR--- 519
Query: 688 SEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRA 747
E + ILG D + + + +
Sbjct: 520 ------------------------------GEGSWEILGIMPCMDPPRHDTYKTVCEAKT 549
Query: 748 AGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTV 807
G+ + +LTGD A Q+ + +N + R L M
Sbjct: 550 LGLSIKMLTGDAVGIARETS----------RQLGLGTNIYNAERLGLGGGGDMP------ 593
Query: 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKA 867
+++ V P K
Sbjct: 594 -----------------------------------GSEVYDFVEAADGF--AEVFPQHKY 616
Query: 868 GIVALVKTR--TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG----- 920
+V +++ R MT GDG ND ++ AD G+ + G SSD A
Sbjct: 617 NVVEILQQRGYLVAMT---GDGVNDAPSLKKADTGIAVEG--------SSDAARSAADIV 665
Query: 921 ----QFRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEW 976
++ L + RM ++Y + L L ++ +L +
Sbjct: 666 FLAPGLGAIIDALKT-SRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRSLNIEL--- 721
Query: 977 SSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTLWQ 1036
V++ I+ + T+ +A + S+ +N W +
Sbjct: 722 --VVFIAIFADVATLAIAYDNAPYSQ--------------TPVKWNLPKLWGMS---VLL 762
Query: 1037 SVVIFFIPFGAYW------DSTIDVSSIGDLWTLAVVILVNI-HLAMDVIRWTWITHAVI 1089
VV+ + ++ V + G++ + + + + + + R +
Sbjct: 763 GVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITR----ANGPF 818
Query: 1090 WGSI--IATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQ 1147
W SI + ++D + + W +FE + T + ++ I + + ++ +Y
Sbjct: 819 WSSIPSWQLSGAIFLVDILATCFTIWGWFEHSDTSIVA--VVRIWIFSFGIFCIMGGVY- 875
Query: 1148 YYYPCDVQIAREAEKVGNLRER 1169
I +++ NL
Sbjct: 876 -------YILQDSVGFDNLMHG 890
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 59.5 bits (145), Expect = 2e-10
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 30/123 (24%)
Query: 618 FDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRG-TESHL-------HA 669
FD +R+RMSV++ + L KGA + +V ++ + I + L
Sbjct: 64 FDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDT 123
Query: 670 YSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 729
+ GLR + V + L A E + E++L + G
Sbjct: 124 LNRQGLRVVAVATKYLPARE----------------------GDYQRADESDLILEGYIA 161
Query: 730 IED 732
D
Sbjct: 162 FLD 164
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 8e-06
Identities = 73/443 (16%), Positives = 137/443 (30%), Gaps = 147/443 (33%)
Query: 377 KDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIP---ISLYISMELVRLGQAYFMIQ 433
+ F EE NYK FLMS I + P +YI Q +
Sbjct: 80 QKFVEEVLRINYK-----------FLMSPIKTEQRQPSMMTRMYIE-------QRDRLYN 121
Query: 434 DSHMYDEASSSRFQCRALNINEDLGQIK---YVF------SDKTGTLT---------ENK 475
D+ ++ + + SR Q L + + L +++ V S KT + + K
Sbjct: 122 DNQVFAKYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKT-WVALDVCLSYKVQCK 179
Query: 476 MEFRCASI-WGIDYSGGNARSHSEEVGYSVQVDGKVLRP--KLTVNVDPHLLQLSRSGKN 532
M+F+ I W ++ N S VL KL +DP+ S N
Sbjct: 180 MDFK---IFW-LNL--KNCNSPET-----------VLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 533 ----TEEGKHVYDFFLALAA-CNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYG 587
+ L N + LV+ NV+ + +A A+
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCL--LVLL----NVQ---------NAKAW----NAFN 263
Query: 588 F---MLIERTSGHI-VID-IQGQRQSRFNVLGLHEFDSDRKRMSVILGL-PDKTVTLFVK 641
+L+ T+ V D + + ++ + L PD+ +L +K
Sbjct: 264 LSCKILL--TTRFKQVTDFLSAATTTHISL------------DHHSMTLTPDEVKSLLLK 309
Query: 642 GADTSMF--------------SVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSA 687
D S+IA+++ + L + + L
Sbjct: 310 YLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT-TIIESSLNVLEP 368
Query: 688 SEFEQWQSSFEAASNALFGRAALLR---KVASSVENNLCILGASGIEDKLQQGVPEAI-E 743
+E+ + +F R ++ + + + L ++ I+ +
Sbjct: 369 AEYRK-----------MFDRLSVFPPSAHIPTIL---LSLIWFDVIKS-----DVMVVVN 409
Query: 744 SLRAAGIKVWVLTGDKQETAISI 766
L ++ +E+ ISI
Sbjct: 410 KLHKYS----LVEKQPKESTISI 428
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.3 bits (114), Expect = 2e-05
Identities = 55/402 (13%), Positives = 119/402 (29%), Gaps = 124/402 (30%)
Query: 77 RFVYINDPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ 136
RF + D + + + + P + + +L LP+
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMT------LTPDEVKSLLLK-----YLDCRP-QDLPR 320
Query: 137 LAVFGRGVSILPLAFVLSVTAIKDA---YEDYRRHRSDRIEN------------------ 175
+ + P + +I+D +++++ D++
Sbjct: 321 EVL-----TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF 375
Query: 176 NRLA----NVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTIN 231
+RL+ + + W D+ +++ + N+ L+ + +I
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVV-VNKL--HKYSLVEKQPKESTISIPSIY 432
Query: 232 LDGESNLKTRYAKQETLL---KVPEKETISGLIKCEKPNRN-IY---GFH-ANMEVDGKR 283
L+ + L+ YA +++ +P+ LI Y G H N+E +
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP--PYLDQYFYSHIGHHLKNIEHPERM 490
Query: 284 LSLGPSNILLRGCELKNTSWALGVAVYAGQETKVMLNSSGAPSKRSWLEMHMNSEIIKLS 343
L R V L+ +LE K+
Sbjct: 491 T-------LFR---------------------MVFLDFR-------FLEQ-------KIR 508
Query: 344 FFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILFTFLM 403
A SI + L + +Y K + + +P + + + FL
Sbjct: 509 HDSTAWNASGSI---------LNTLQQLKFY--KPYICDNDPKYERL----VNAILDFLP 553
Query: 404 SVIVFQVMIPISLYIS--MELVRLGQAYFMIQDSHMYDEASS 443
I +L S +L+R+ M +D +++EA
Sbjct: 554 K-------IEENLICSKYTDLLRIA---LMAEDEAIFEEAHK 585
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 3e-05
Identities = 59/406 (14%), Positives = 110/406 (27%), Gaps = 104/406 (25%)
Query: 62 EGLSMSQKEISEEDARFVYINDPV-KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRV 120
+ Q++ S ++ D + N+ F N R Y L R +
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA-KYNVSRLQPYLKL----RQALLELRPA 150
Query: 121 AYIYF----------LVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYEDYRRH-- 168
+ + + V + L L S + + +
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID 210
Query: 169 -----RSDRIENNRL----ANVLVNNQFQEKKWK-------DIRVGEIIK---IKTNETI 209
RSD N +L + + K ++ +++ + +
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS----- 265
Query: 210 PCDMVLLSTSDPT-----GVAYLQTINLDGESNLKTRYAKQETLLKV---------PEKE 255
C +LL+T A I+LD S T + LLK E
Sbjct: 266 -CK-ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323
Query: 256 TIS----GLI---KCEKPNRNIYGFHANME-----VDGKRLSLGPSNILLRGCELKNTSW 303
T + +I + H N + ++ L P+ E +
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA-------EYRKMFD 376
Query: 304 ALGV---------AVYA-------GQETKVMLNSSGAPSKRSWLEMHMNSEIIKL-SFFL 346
L V + + + V++N K S +E I + S +L
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL---HKYSLVEKQPKESTISIPSIYL 433
Query: 347 VALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEP--DNYKY 390
+ + A H +D+ + D + P D Y Y
Sbjct: 434 ELKVKLENEYAL-----HRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 5e-04
Identities = 33/203 (16%), Positives = 63/203 (31%), Gaps = 41/203 (20%)
Query: 890 DVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWNYQR-MGYMILYNF 948
D +Q + +S +E +MS D A+ L LL Q+ + ++ N
Sbjct: 34 DCKDVQDMPKSI-LSKEEIDHIIMSKD-AVSGTLRLFWTLLSKQEEMVQKFVEEVLRIN- 90
Query: 949 YRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLY----SVIYTSLPTIV---VAILDKDLS 1001
Y+ + L + + +Y +Y V+ L L
Sbjct: 91 YK---------F--LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139
Query: 1002 RRTLLQNPQ------LYG-AGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGAYWDSTID 1054
R L + + G G T W+ D V + F +W + +
Sbjct: 140 LRQALLELRPAKNVLIDGVLG----SGKT---WVA-LDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 1055 VSSIGDLWTLAVVILVNIHLAMD 1077
+S + + +L + +D
Sbjct: 192 CNSPETV----LEMLQKLLYQID 210
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 8e-04
Identities = 110/764 (14%), Positives = 215/764 (28%), Gaps = 246/764 (32%)
Query: 452 NINEDLGQIKYVFSDKTGTLTEN-KMEFRCASIWGIDYSGGNARS--HSEEVGYSVQVDG 508
+++ + G+ +Y + D + F C + D +S EE+ + +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDV--QDMP----KSILSKEEIDHIIMSKD 59
Query: 509 KVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVK-LV 567
V L + V F V + N K L+
Sbjct: 60 AVSGTLRLFWT------LLSKQEEM-----VQKF-------------VEEVLRINYKFLM 95
Query: 568 D---YQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKR 624
+ P +Y +R Q +++NV L + R+
Sbjct: 96 SPIKTEQRQPSMMTRMYIEQ------RDRLYN------DNQVFAKYNVSRLQPYLKLRQ- 142
Query: 625 MSVILGL-PDKTVTLF-VKGADTSMFSVIAKAL-NMNVIRGTESHLHAYSSLGL----RT 677
+L L P K V + V G+ + V + V + + + +L T
Sbjct: 143 --ALLELRPAKNVLIDGVLGSGKT--WVALDVCLSYKVQCKMDFKIF-WLNLKNCNSPET 197
Query: 678 LVVGMRELSASEFEQWQSSFEAASNALF----GRAALLRKVASSV-ENNLCILGASGIED 732
++ +++L W S + +SN +A L R + S EN L +L
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL------L 251
Query: 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRK 792
+Q +A + K+ + T KQ T L + T + ++ +S
Sbjct: 252 NVQN--AKAWNAF-NLSCKILLTTRFKQVTDF-------LSAATTTHISLDHHSM----- 296
Query: 793 SLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGT 852
+L K L L +D +L ++
Sbjct: 297 TLTPD--EVKSL--------------------LLKYLD------CRPQDLPREV------ 322
Query: 853 CSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAV 912
P + + I ++ DG
Sbjct: 323 ------LTTNPRRLSIIAESIR-----------DGLA----------------------- 342
Query: 913 MSSDFAMGQFRFLVTLLLVHGHW-NYQRMGYMILYNFYRNAV--LVFVLF--WYVLFTAF 967
W N++ + L +++ L + + + F
Sbjct: 343 ---------------------TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 968 TLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQN---------PQLY------ 1012
+ I ++L S+I+ + V ++ L + +L++ P +Y
Sbjct: 382 PPSAHI---PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 1013 ----GAGHRQ--ECYNT--KLFWLTMADTLWQSVVIFFIPFGAYWDSTIDVSSIGDLWTL 1064
A HR + YN + I + I+ + TL
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI---GHHLKNIE---HPERMTL 492
Query: 1065 AVVILVNIHLAMDVIRWTWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFF---EVAKT 1121
++ ++ ++ + S A I++ + L Y + +
Sbjct: 493 FRMVFLDFR---------FLEQKIRHDS-TAWNASGSILNTLQQLKFYKPYICDNDPKYE 542
Query: 1122 RLFWFCLMIILVAALIPRFLVKF---LYQYYYPCDVQIAREAEK 1162
R LV A++ FL K L Y ++IA AE
Sbjct: 543 R---------LVNAIL-DFLPKIEENLICSKYTDLLRIALMAED 576
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 9e-06
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 881 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMS-SDFAMGQFRFLVTLL 929
+ IGDGA D+ AD +G G RQ V + + + F L+ L
Sbjct: 174 IIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGEL 223
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 1e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 676 RTLVVG----MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 731
++VG M + + + + + E + A++ VA + G +
Sbjct: 482 DGILVGNKRLMEDFGVAVSNEVELALEKLERE--AKTAVI--VA--RNGRV--EGIIAVS 533
Query: 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
D L++ A++ L+ GIKV ++TGD +A +I
Sbjct: 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 2e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 676 RTLVVG----MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 731
++VG M + + + + + E + A++ VA + G +
Sbjct: 110 DGILVGNKRLMEDFGVAVSNEVELALEKLERE--AKTAVI--VA--RNGRV--EGIIAVS 161
Query: 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
D L++ A++ L+ GIKV ++TGD +A +I
Sbjct: 162 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 197
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 47.1 bits (113), Expect = 3e-05
Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 12/96 (12%)
Query: 676 RTLVVG----MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIE 731
++VG M + + + + + E + A++ VA + G +
Sbjct: 404 DGILVGNKRLMEDFGVAVSNEVELALEKLERE--AKTAVI--VA--RNGRV--EGIIAVS 455
Query: 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
D L++ A++ L+ GIKV ++TGD +A +I
Sbjct: 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 491
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 4e-05
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
+ G + D+++ EAI L+A GIK +LTGD + A +
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 46.8 bits (112), Expect = 4e-05
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
+ +ED ++ PE I L+ +GI++ +LTGD + TA ++
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 45.5 bits (109), Expect = 5e-05
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767
+ + I D + + + +E L+ G+K+ +L+GDK++ +
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 9e-05
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 881 TLAIGDGANDVSMIQMADVGV 901
+A GD ND +M+ A G+
Sbjct: 148 VIAAGDSYNDTTMLSEAHAGI 168
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 1e-04
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 881 TLAIGDGANDVSMIQMADVGVG 902
T+A+GDGAND+SM + A + +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIA 183
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 1e-04
Identities = 11/22 (50%), Positives = 16/22 (72%)
Query: 881 TLAIGDGANDVSMIQMADVGVG 902
TL +GDGAND+SM + A + +
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIA 182
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 7/43 (16%), Positives = 20/43 (46%)
Query: 874 KTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD 916
+ + +GD ND+ + + D+ V + + + V+++
Sbjct: 190 DPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLATP 232
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 881 TLAIGDGANDVSMIQMADVGVG 902
T+A+GDGAND+ M+ A +GV
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVA 285
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 881 TLAIGDGANDVSMIQMADVGVG 902
+A GDGAND+ M++ A G+
Sbjct: 265 IIACGDGANDLPMLEHAGTGIA 286
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 4e-04
Identities = 11/22 (50%), Positives = 17/22 (77%)
Query: 881 TLAIGDGANDVSMIQMADVGVG 902
T+A+GDGAND+ M+ A +G+
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIA 363
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1185 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.84 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.87 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.82 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.8 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.72 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.68 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.49 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.74 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.68 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.68 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.66 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.65 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.64 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.54 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.54 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.53 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.51 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.5 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.46 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.42 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.32 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.31 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.27 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.2 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.19 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.19 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.18 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.18 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.15 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.13 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.07 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.06 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.04 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.03 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.02 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.0 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 97.97 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 97.95 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.94 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 97.93 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 97.92 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 97.91 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.89 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.81 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.8 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.79 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.77 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.74 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.73 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 97.73 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 97.7 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 97.7 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.67 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.67 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 97.64 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 97.64 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 97.63 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.62 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 97.61 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 97.6 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.6 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.59 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.56 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.55 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.54 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.52 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.49 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.49 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.49 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 97.46 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.46 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.45 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.45 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.44 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 97.41 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.41 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.39 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.37 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.37 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.32 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.27 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.26 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.23 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.22 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.2 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.18 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.18 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 97.09 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.05 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.04 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.0 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 96.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 96.92 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 96.9 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 96.9 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 96.89 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 96.88 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 96.85 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 96.84 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 96.76 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.69 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 96.69 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.5 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.36 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.31 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 96.29 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 96.18 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.18 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.1 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 95.98 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 95.93 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 95.9 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 95.89 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 95.76 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 95.74 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 95.71 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 95.61 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 95.34 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 95.31 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 95.31 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.1 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 94.7 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 94.66 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 94.24 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 94.18 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.86 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 93.84 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 93.64 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 93.56 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 93.36 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 93.04 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 92.96 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 92.55 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 92.35 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 92.29 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 89.82 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 89.56 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 88.74 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 88.58 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 85.9 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 85.86 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 81.86 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 80.19 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-107 Score=1058.32 Aligned_cols=890 Identities=19% Similarity=0.199 Sum_probs=660.9
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccccc-----CccchhhhHHHHHHHHHHH
Q 001023 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-----GRGVSILPLAFVLSVTAIK 159 (1185)
Q Consensus 85 ~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~-----~~~~~~~~l~~vi~~s~i~ 159 (1185)
+..+|+++||+|.++..|+..++ +.|++||++++++++++++++++++.+.+. ..|...+.++++++++++.
T Consensus 29 e~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i 105 (995)
T 3ar4_A 29 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 105 (995)
T ss_dssp HHHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHH
Confidence 33457889999999998765443 899999999999999999999988654332 2344455666677778888
Q ss_pred HHHHHHHHhhhhH---HhhcceEEEEeCCe--EEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCC
Q 001023 160 DAYEDYRRHRSDR---IENNRLANVLVNNQ--FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDG 234 (1185)
Q Consensus 160 ~~~ed~~r~k~d~---~~n~~~~~V~r~g~--~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtG 234 (1185)
..++++|..++.+ ++.+.+++|+|||+ .++|+|++|+|||||+|++||.||||++|++.+. +.|+||||+|||
T Consensus 106 ~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTG 183 (995)
T 3ar4_A 106 GVWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTG 183 (995)
T ss_dssp HHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHC
T ss_pred HHHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccC
Confidence 8888888766643 45678999999887 6999999999999999999999999999987543 559999999999
Q ss_pred CCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEeccc
Q 001023 235 ESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQE 314 (1185)
Q Consensus 235 Es~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~ 314 (1185)
||+|+.|.+++.. +| ...+.+.+|++++||.+.+ |+++|+|++||++
T Consensus 184 ES~pv~K~~~~~~-----------------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~ 230 (995)
T 3ar4_A 184 ESVSVIKHTEPVP-----------------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVS 230 (995)
T ss_dssp CCSCEEECCSCCC-----------------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGG
T ss_pred CCcceeccccccC-----------------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEcCcc
Confidence 9999999886432 01 1124567899999999998 8999999999999
Q ss_pred chh---hhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccc
Q 001023 315 TKV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYY 391 (1185)
Q Consensus 315 Tki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~ 391 (1185)
|++ ++....++.+++++++.+|++..+++.+++++|++.++++..+...... ...|
T Consensus 231 T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------ 289 (995)
T 3ar4_A 231 TEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH---GGSW------------------ 289 (995)
T ss_dssp SHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSS---SSCH------------------
T ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cchH------------------
Confidence 965 4555677888999999999999999998888887776554321110000 0011
Q ss_pred cchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCcc
Q 001023 392 GWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTL 471 (1185)
Q Consensus 392 ~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTL 471 (1185)
.......|..++.+++.+|||+||++++++..+++..| +++++++|+++.+|+||++|+|||||||||
T Consensus 290 --~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTL 357 (995)
T 3ar4_A 290 --IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTL 357 (995)
T ss_dssp --HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTT
T ss_pred --HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCc
Confidence 22233456788999999999999999999998888766 788999999999999999999999999999
Q ss_pred ccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcc
Q 001023 472 TENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNT 551 (1185)
Q Consensus 472 T~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht 551 (1185)
|+|+|+|.++++.+..++... .... . ..++....+..... . + +..........+.+++.++++||+
T Consensus 358 T~n~m~v~~~~~~~~~~~~~~-~~~~-~-----~~~~~~~~p~~~~~-~----~--~~~~~~~~~~~~~~l~~~~alc~~ 423 (995)
T 3ar4_A 358 TTNQMSVCKMFIIDKVDGDFC-SLNE-F-----SITGSTYAPEGEVL-K----N--DKPIRSGQFDGLVELATICALCND 423 (995)
T ss_dssp BCCCCEEEEEEEEEEEETTEE-EEEE-E-----EECCSSSSSCCCEE-E----T--TEECCGGGCHHHHHHHHHHHHSCC
T ss_pred ccCceEEEEEEecCcccCccc-ccce-e-----eccCCCcCCccccc-c----c--cccccccccHHHHHHHHHHHHcCC
Confidence 999999999998765443100 0000 0 00000000000000 0 0 000112234557789999999999
Q ss_pred cccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEe------cCceeeeEEEEEeecCCCCCceE
Q 001023 552 IVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDI------QGQRQSRFNVLGLHEFDSDRKRM 625 (1185)
Q Consensus 552 ~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~------~g~~~~~~~il~~~~F~s~rkrm 625 (1185)
+.. +.++..+.. ...++|+|.||+.+|++.|+ +...... +.... .+... .|++++.+||+|+||||
T Consensus 424 ~~~----~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~~~~-~~~~~~~~pF~s~rk~m 495 (995)
T 3ar4_A 424 SSL----DFNETKGVY-EKVGEATETALTTLVEKMNV-FNTEVRN-LSKVERANACNSVIRQ-LMKKEFTLEFSRDRKSM 495 (995)
T ss_dssp CEE----EEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCCCCTT-SCTTTSTTHHHHHHHH-HEEEEEEEEEETTTTEE
T ss_pred Ccc----cccCCCCce-eecCCccHHHHHHHHHHcCC-ccccccc-cccccccccchhhhhh-hCceEEEeecCCCCCee
Confidence 876 222222222 23479999999999999887 2111000 00000 01234 79999999999999999
Q ss_pred EEEEecCCC-----cEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHH--hhcCCeEEEEEEEecCHHHH
Q 001023 626 SVILGLPDK-----TVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAY--SSLGLRTLVVGMRELSASEF 690 (1185)
Q Consensus 626 sviv~~~~~-----~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~--a~~GlRtl~~A~r~l~~~e~ 690 (1185)
||+++.++| +..+|+||||+.|+++|.... +++.++.+.+++++| +++|+|||++|||+++..+.
T Consensus 496 svi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~ 575 (995)
T 3ar4_A 496 SVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE 575 (995)
T ss_dssp EEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG
T ss_pred EEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc
Confidence 999998776 689999999999999996431 234567888999999 99999999999999864210
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001023 691 EQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 770 (1185)
Q Consensus 691 ~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~ 770 (1185)
...+.+ ....+.+|+|++|+|+++++|++|+|++++|+.|+++||++||+|||+.+||.+||++|
T Consensus 576 ----------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~l 640 (995)
T 3ar4_A 576 ----------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRI 640 (995)
T ss_dssp ----------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred ----------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHc
Confidence 001111 11346789999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHh
Q 001023 771 KLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLA 850 (1185)
Q Consensus 771 gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 850 (1185)
||...+... ...+++|+.+..+.++++.+.+
T Consensus 641 gi~~~~~~i---------------------------------------------~~~~~~g~~~~~l~~~~~~~~~---- 671 (995)
T 3ar4_A 641 GIFGENEEV---------------------------------------------ADRAYTGREFDDLPLAEQREAC---- 671 (995)
T ss_dssp TSSCTTCCC---------------------------------------------TTTEEEHHHHHTSCHHHHHHHH----
T ss_pred CcCCCCCcc---------------------------------------------cceEEEchhhhhCCHHHHHHHH----
Confidence 997643210 0026778887766554444333
Q ss_pred ccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecc--hhhHHH
Q 001023 851 GTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVT 927 (1185)
Q Consensus 851 ~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~--f~~l~~ 927 (1185)
.. ..+|||++|+||+.+|+.+|+ .|+.|+|+|||+||++||++|||||+| +|.+. |+++||+++.+ |..+..
T Consensus 672 ~~--~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~i~~ 746 (995)
T 3ar4_A 672 RR--ACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVA 746 (995)
T ss_dssp HH--CCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHHHHH
T ss_pred hh--CcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHHHHH
Confidence 22 449999999999999999999 699999999999999999999999999 45555 88999999987 555777
Q ss_pred HHHHHhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhc
Q 001023 928 LLLVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQ 1007 (1185)
Q Consensus 928 lll~~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~ 1007 (1185)
+ +.|||++|+|+++++.|.+++|+..+++.+++.++. ...++.+++++|+|++++.+|++++|+++.| ++.+.+
T Consensus 747 ~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g---~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~--~~~m~~ 820 (995)
T 3ar4_A 747 A-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFNPPD--LDIMDR 820 (995)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSSCHHHHHHHHHTTTHHHHHHHTTCCCC--TTGGGS
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---CcchHHHHHHHHHHHHHHHHHHHhhccCCCC--hhHHhC
Confidence 7 899999999999999999999999988888887764 3357899999999999999999999986544 345555
Q ss_pred CCcccccccCCcccchhHHHHHHHhHHHHHhhheee--c-cccccCC-------------------cc-----c---chh
Q 001023 1008 NPQLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFI--P-FGAYWDS-------------------TI-----D---VSS 1057 (1185)
Q Consensus 1008 ~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~vif~~--~-~~~~~g~-------------------~~-----~---~~~ 1057 (1185)
.|+ .+++.+++++.++.|++.|+++++++++. + +....|. .+ + ...
T Consensus 821 ~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (995)
T 3ar4_A 821 PPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPE 896 (995)
T ss_dssp CCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHH
T ss_pred CCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchh
Confidence 565 45678999999999999999998776432 1 1111110 00 0 112
Q ss_pred hhHHHHHHHHHHHHHHHHHhhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHH
Q 001023 1058 IGDLWTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMI 1130 (1185)
Q Consensus 1058 ~~~~~~~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~ll 1130 (1185)
..++.|+++++...+.. +.+++ | ..+.+..+++++++.+++.++..++|.++. .|...+.++.+|+.+++
T Consensus 897 ~~t~~f~~lv~~~~~~~-~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~ 973 (995)
T 3ar4_A 897 PMTMALSVLVTIEMCNA-LNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPM--IFKLKALDLTQWLMVLK 973 (995)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHH--HTTCCCCCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHH-HHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCCCHHHHHHHHH
Confidence 35666666666655444 33322 1 123455566666665555555566664433 34455668899999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 001023 1131 ILVAALIPRFLVKFLYQYY 1149 (1185)
Q Consensus 1131 v~~~~~l~~~~~k~~~r~f 1149 (1185)
+.++.+++.++.|+++|.|
T Consensus 974 ~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 974 ISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 9999999999999998876
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-105 Score=1043.66 Aligned_cols=883 Identities=18% Similarity=0.170 Sum_probs=677.3
Q ss_pred CCcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCc--------ccccCccchhhhHHHHHH
Q 001023 83 DPVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ--------LAVFGRGVSILPLAFVLS 154 (1185)
Q Consensus 83 ~~~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~--------~~~~~~~~~~~~l~~vi~ 154 (1185)
..+..+|+++||+|.++..|.+.++ +.+++||.++++++++++++++++.. +...+.+...++++++++
T Consensus 75 ~~ea~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~ 151 (1034)
T 3ixz_A 75 ASLAAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVV 151 (1034)
T ss_pred HHHHHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeee
Confidence 3344458899999999988876554 88999999999999999888886531 111234667888899999
Q ss_pred HHHHHHHHHHHHHhhhhHHhh---cceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEecc
Q 001023 155 VTAIKDAYEDYRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTIN 231 (1185)
Q Consensus 155 ~s~i~~~~ed~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~ 231 (1185)
++++..+++++|+.++.+.++ +.+++|+|||++++|+|++|+|||||.|++||.||||++||++++ +.||||+
T Consensus 152 i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~ 227 (1034)
T 3ixz_A 152 VTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSS 227 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecc
Confidence 999999999999999866554 578999999999999999999999999999999999999999775 8899999
Q ss_pred CCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEe
Q 001023 232 LDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYA 311 (1185)
Q Consensus 232 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~t 311 (1185)
|||||+|+.|.+.+.. ..|++..|++++||.+.+ |.++|+|++|
T Consensus 228 LTGES~pv~K~~~~~~-----------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~t 271 (1034)
T 3ixz_A 228 LTGESEPQTRSPECTH-----------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNT 271 (1034)
T ss_pred cCCCCCCeeccCCCcc-----------------------------------ccccccccceecceeEEe-ecceEEEEee
Confidence 9999999999876432 123345566666666665 5599999999
Q ss_pred cccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCc
Q 001023 312 GQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNY 388 (1185)
Q Consensus 312 G~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~ 388 (1185)
|.+| |+.......+.+++++++.++++..++..+.++++++.++++.+..
T Consensus 272 G~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------------------------- 324 (1034)
T 3ixz_A 272 GDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG--------------------------- 324 (1034)
T ss_pred hhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 9999 5666667778889999999999999998888888887776654321
Q ss_pred ccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCC
Q 001023 389 KYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKT 468 (1185)
Q Consensus 389 ~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKT 468 (1185)
..+...+..++.+++.+||++||++++++..+++.+| ++++++||+++++|+||++++||||||
T Consensus 325 ------~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKT 388 (1034)
T 3ixz_A 325 ------YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKT 388 (1034)
T ss_pred ------chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCC
Confidence 1124467888999999999999999999999998877 789999999999999999999999999
Q ss_pred CccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHh
Q 001023 469 GTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAA 548 (1185)
Q Consensus 469 GTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~ 548 (1185)
||||+|+|+|.++++++..|.....+.+ . .............+++++++
T Consensus 389 GTLT~n~m~v~~~~~~~~~~~~~~~~~~-----------------------~--------~~~~~~~~~~~~~l~~~~~l 437 (1034)
T 3ixz_A 389 GTLTQNRMTVSHLWFDNHIHSADTTEDQ-----------------------S--------GQTFDQSSETWRALCRVLTL 437 (1034)
T ss_pred CCcccCeEEEEEEEECCccccccCcccc-----------------------c--------ccccCcCCHHHHHHHHHHHH
Confidence 9999999999999998876653211100 0 00001223456678999999
Q ss_pred hcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEE
Q 001023 549 CNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVI 628 (1185)
Q Consensus 549 Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsvi 628 (1185)
||++.....+. .....-....++|.|.|+++++...+.... +.+. .|+.+..+||+|+||||+++
T Consensus 438 c~~a~~~~~~~--~~~~~~~~~~gdp~e~All~~~~~~~~~~~------------~~~~-~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 438 CNRAAFKSGQD--AVPVPKRIVIGDASETALLKFSELTLGNAM------------GYRE-RFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred hccceeccCcC--CCcccCceeccCchHHHHHHHHHHhCCChH------------HHHH-hCcceEEeeecCCCceEEEE
Confidence 99987621111 000111234579999999999988764321 2234 78899999999999999988
Q ss_pred EecC---CCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001023 629 LGLP---DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 697 (1185)
Q Consensus 629 v~~~---~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~ 697 (1185)
++.+ ++++.+|+||||+.|+++|+... +++.++.+.+.+++|+.+|+|||++|+|.++++++.++....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc
Confidence 8754 37899999999999999997531 345677889999999999999999999999987765442211
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCc
Q 001023 698 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 777 (1185)
Q Consensus 698 ~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~ 777 (1185)
+ +..+.+|+||+|+|+++++||+|++++++|++|+++||+|||+|||+.+||.+||++|||..++.
T Consensus 583 ---------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~ 648 (1034)
T 3ixz_A 583 ---------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGS 648 (1034)
T ss_pred ---------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCc
Confidence 1 11245689999999999999999999999999999999999999999999999999999986542
Q ss_pred eEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeE
Q 001023 778 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 857 (1185)
Q Consensus 778 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi 857 (1185)
.. +.+..+..... .... ........+++|..+....++++ .++...++.++
T Consensus 649 ~~--------------i~~~~~~~~~~-----~~~~------~~~~~~~~~~~g~~l~~~~~~~l----~~~~~~~~~~v 699 (1034)
T 3ixz_A 649 ET--------------VEDIAARLRVP-----VDQV------NRKDARACVINGMQLKDMDPSEL----VEALRTHPEMV 699 (1034)
T ss_pred hH--------------HHHHHHhhCcc-----chhc------cccccceeEEecHhhhhCCHHHH----HHHHHhCCceE
Confidence 11 00000000000 0000 01334567899999887665443 44455677789
Q ss_pred EEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhhHHHHH-HHHhhHH
Q 001023 858 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTLL-LVHGHWN 936 (1185)
Q Consensus 858 ~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~ll-l~~Gr~~ 936 (1185)
|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||.++...+|+++||+++.++++..... +.|||++
T Consensus 700 ~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i 778 (1034)
T 3ixz_A 700 FARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLI 778 (1034)
T ss_pred EEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHH
Confidence 999999999999999999 89999999999999999999999999953333349999999999988844332 7799999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCccccccc
Q 001023 937 YQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGH 1016 (1185)
Q Consensus 937 ~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~ 1016 (1185)
|+|+++++.|.+++|+..+++.+++.++. .+.++.+++++|+|++++.+|++++++. +++..+|+.|+ ..+
T Consensus 779 ~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e---~~~~~~m~~~P---r~~ 849 (1034)
T 3ixz_A 779 FDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYE---KAESDIMHLRP---RNP 849 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCChhhhhCCC---CCC
Confidence 99999999999999999999999888775 4578999999999999999999999973 34555665544 134
Q ss_pred -CCcccchhHHHHH-HHhHHHHHhhheeecccc--ccCCc----------------cc-----------------chhhh
Q 001023 1017 -RQECYNTKLFWLT-MADTLWQSVVIFFIPFGA--YWDST----------------ID-----------------VSSIG 1059 (1185)
Q Consensus 1017 -~~~~~~~~~~~~~-~~~~~~~~~vif~~~~~~--~~g~~----------------~~-----------------~~~~~ 1059 (1185)
++.+++++.++.. +..|++++++.|+.+++. ..|.. .+ .....
T Consensus 850 ~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 929 (1034)
T 3ixz_A 850 KRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCY 929 (1034)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhHH
Confidence 4678888877654 345777766555442210 01100 00 01134
Q ss_pred HHHHHHHHHHHHHHHHHhhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHH
Q 001023 1060 DLWTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIIL 1132 (1185)
Q Consensus 1060 ~~~~~~~v~~~~~~~~l~~~~-----~--~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~ 1132 (1185)
++.|+++++...+. ++.+++ | ..+.+.++|+++++.+++++++.++|.++. .|.....++..|+.++++.
T Consensus 930 t~~f~~lv~~q~~~-~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~ 1006 (1034)
T 3ixz_A 930 TVFFISIEMCQIAD-VLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPN--IFNFMPIRFQWWLVPMPFG 1006 (1034)
T ss_pred HHHHHHHHHHHHHH-HHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHH--HhcCCCCCHHHHHHHHHHH
Confidence 55666655554444 333333 2 235677888899888888888888887665 4556667899999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCH
Q 001023 1133 VAALIPRFLVKFLYQYYYPCD 1153 (1185)
Q Consensus 1133 ~~~~l~~~~~k~~~r~f~p~~ 1153 (1185)
++.++.+++.|++.|++-+..
T Consensus 1007 ~~~~~~~e~~K~~~r~~~~~~ 1027 (1034)
T 3ixz_A 1007 LLIFVYDEIRKLGVRCCPGSW 1027 (1034)
T ss_pred HHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999875544
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-106 Score=1046.43 Aligned_cols=874 Identities=18% Similarity=0.190 Sum_probs=668.7
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcc-c-------ccCccchhhhHHHHHHHHH
Q 001023 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL-A-------VFGRGVSILPLAFVLSVTA 157 (1185)
Q Consensus 86 ~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~-~-------~~~~~~~~~~l~~vi~~s~ 157 (1185)
...|+++||+|.++..|...++ +.+++||+++++++++++++++++... . ..+.+...+++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~ 149 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHH
Confidence 3447889999999998654433 889999999999999999999876411 1 0124556778889999999
Q ss_pred HHHHHHHHHHhhhhHHh---hcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCC
Q 001023 158 IKDAYEDYRRHRSDRIE---NNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDG 234 (1185)
Q Consensus 158 i~~~~ed~~r~k~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtG 234 (1185)
+.+++|++|..++.+.+ .+.+++|+|||++++|+|++|+|||||.|++||.||||++|+++++ |+||||+|||
T Consensus 150 ~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTG 225 (1028)
T 2zxe_A 150 CFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTG 225 (1028)
T ss_dssp HHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCC
Confidence 99999999888876544 4689999999999999999999999999999999999999999654 9999999999
Q ss_pred CCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEeccc
Q 001023 235 ESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQE 314 (1185)
Q Consensus 235 Es~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~ 314 (1185)
||+|+.|.+++.. ..|++.+|++++||.+.+ |+++|+|++||.+
T Consensus 226 ES~pv~K~~~~~~-----------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~ 269 (1028)
T 2zxe_A 226 ESEPQTRSPEFSS-----------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGDR 269 (1028)
T ss_dssp CCSCEECCSSCCC-----------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGGG
T ss_pred CCcceecccCCCC-----------------------------------CCcccccceEEeCceEEc-ceEEEEEEEeccc
Confidence 9999999886532 115677899999999997 8899999999999
Q ss_pred ch---hhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccc
Q 001023 315 TK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYY 391 (1185)
Q Consensus 315 Tk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~ 391 (1185)
|+ ++++...++.+++++++.+++++.+++.+.++++++.+++..+.. ..|
T Consensus 270 T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~---------~~~------------------ 322 (1028)
T 2zxe_A 270 TVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG---------YSW------------------ 322 (1028)
T ss_dssp SHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CCH------------------
T ss_pred cHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------CcH------------------
Confidence 95 456667778899999999999999999999888888877643211 012
Q ss_pred cchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCcc
Q 001023 392 GWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTL 471 (1185)
Q Consensus 392 ~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTL 471 (1185)
...+..++.+++.+|||+||++++++..+++.+| ++++++||+++.+|+||++|+|||||||||
T Consensus 323 ------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTL 386 (1028)
T 2zxe_A 323 ------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTL 386 (1028)
T ss_dssp ------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCC
T ss_pred ------HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCCC
Confidence 2256667788889999999999999999988776 789999999999999999999999999999
Q ss_pred ccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhcc
Q 001023 472 TENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNT 551 (1185)
Q Consensus 472 T~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht 551 (1185)
|+|+|+|.++++++..|.....+.+ . + ..........++++.++++||+
T Consensus 387 T~n~m~v~~~~~~~~~~~~~~~~~~----------------~--------------~-~~~~~~~~~~~~l~~~~alc~~ 435 (1028)
T 2zxe_A 387 TQNRMTVAHMWFDNQIHEADTTENQ----------------S--------------G-AAFDKTSATWSALSRIAALCNR 435 (1028)
T ss_dssp BCSSCEEEEEEETTEEEECCCCTTC----------------C--------------S-CCCCSSCHHHHHHHHHHHHSCC
T ss_pred CCCeEEEEEEEECCeeeeccCCCCc----------------c--------------c-cccccCCHHHHHHHHHHHhcCC
Confidence 9999999999998876642111000 0 0 0001123345678899999999
Q ss_pred cccccccCCCCCCcc--eeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEE
Q 001023 552 IVPLVVDTSDPNVKL--VDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVIL 629 (1185)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv 629 (1185)
+.. +.+.+... -.+..++|+|.||+++|++.|... .+.+. .|++++.+||+|+||||++++
T Consensus 436 ~~~----~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~------------~~~~~-~~~~~~~~pF~s~rk~msvi~ 498 (1028)
T 2zxe_A 436 AVF----QAGQDNVPILKRSVAGDASESALLKCIELCCGSV------------QGMRD-RNPKIVEIPFNSTNKYQLSIH 498 (1028)
T ss_dssp CEE----CTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH------------HHHHH-HSCEEEEECCCTTTCEEEEEE
T ss_pred Cee----ecCCCCCccccceeCCCchHHHHHHHHHHhCCCH------------HHHHH-hCceEEEeccCcccceEEEEE
Confidence 876 32211110 112357999999999998764310 11223 688999999999999999999
Q ss_pred ecC---CCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001023 630 GLP---DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 698 (1185)
Q Consensus 630 ~~~---~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~ 698 (1185)
+.+ ++++++|+||||+.|+++|.... +++.++.+.+++++|+++|+|||++|+|++++++|.++..
T Consensus 499 ~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~--- 575 (1028)
T 2zxe_A 499 ENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP--- 575 (1028)
T ss_dssp ECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC---
T ss_pred eccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc---
Confidence 974 57899999999999999997421 3445678899999999999999999999997654332100
Q ss_pred HHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCce
Q 001023 699 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 778 (1185)
Q Consensus 699 ~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~ 778 (1185)
. +++ ..+.+|+|++|+|+++++|++|++++++|++|+++||+|||+|||+.+||.+||++|||...+..
T Consensus 576 -----~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~ 644 (1028)
T 2zxe_A 576 -----F-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 644 (1028)
T ss_dssp -----C-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC
T ss_pred -----c-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch
Confidence 0 110 11345899999999999999999999999999999999999999999999999999999865432
Q ss_pred EEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEE
Q 001023 779 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 858 (1185)
Q Consensus 779 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~ 858 (1185)
.+ .+ .. ..... .. .... .......+++|..+..+.++++ .++...++.++|
T Consensus 645 ~i-------~~----~~---~~~~~-~~----~~~~------~~~~~~~vi~G~~l~~~~~~~l----~~~~~~~~~~v~ 695 (1028)
T 2zxe_A 645 TI-------ED----IA---ARLNI-PI----GQVN------PRDAKACVVHGSDLKDLSTEVL----DDILHYHTEIVF 695 (1028)
T ss_dssp CH-------HH----HH---HHTTC-CG----GGSC------GGGCCEEEEEHHHHTTCCHHHH----HHHHHHCSEEEE
T ss_pred hH-------HH----HH---hhcCc-ch----hhcc------ccccceEEEEcHHhhhCCHHHH----HHHHhhCCcEEE
Confidence 21 11 10 00000 00 0000 1233467999999987665443 445556777899
Q ss_pred EecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec--CcchhHHhhcCceeecc--hhhHHHHHHHHhh
Q 001023 859 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 934 (1185)
Q Consensus 859 ~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis--g~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr 934 (1185)
||++|+||..+|+.+|+ .|++|+|+|||+||++||++|||||+|. |++. |+++||+++.+ |..+.++ +.|||
T Consensus 696 ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I~~~-i~~gR 771 (1028)
T 2zxe_A 696 ARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASIVTG-VEEGR 771 (1028)
T ss_dssp ESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHHHHH-HHHHH
T ss_pred EEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHHHHH-HHHHH
Confidence 99999999999999999 7999999999999999999999999994 6666 88999999987 5557777 89999
Q ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCccccc
Q 001023 935 WNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGA 1014 (1185)
Q Consensus 935 ~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~ 1014 (1185)
++|+|+++++.|.+++|+..+++.+++.++. ...++++++++|+|++++.+|+++++. |+ +.++.+.+.|+ .
T Consensus 772 ~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al~~-e~-~~~~~m~~~Pr---~ 843 (1028)
T 2zxe_A 772 LIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISLAY-EQ-AESDIMKRQPR---N 843 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHGGG-CC-CSSCGGGSCCC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHhcc-Cc-cchhhhccCCC---C
Confidence 9999999999999999999988888887764 356789999999999999999999986 33 23344444454 2
Q ss_pred ccCCcccchhHHHH-HHHhHHHHHhhheeecccc--ccCC------------------cc----c-----------chhh
Q 001023 1015 GHRQECYNTKLFWL-TMADTLWQSVVIFFIPFGA--YWDS------------------TI----D-----------VSSI 1058 (1185)
Q Consensus 1015 ~~~~~~~~~~~~~~-~~~~~~~~~~vif~~~~~~--~~g~------------------~~----~-----------~~~~ 1058 (1185)
...+.+++++.++. |+..|++++++.|+.+++. ..|. .. + ....
T Consensus 844 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1028)
T 2zxe_A 844 PKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTC 923 (1028)
T ss_dssp TTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHH
Confidence 23348999988776 5677999998776553221 1111 00 0 0134
Q ss_pred hHHHHHHHHHHHHHHHHHh-hccchh----HhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHH
Q 001023 1059 GDLWTLAVVILVNIHLAMD-VIRWTW----ITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILV 1133 (1185)
Q Consensus 1059 ~~~~~~~~v~~~~~~~~l~-~~~~~~----~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~ 1133 (1185)
.+++|+++++...+..+.. +...++ +.+..+|+++++.+++.++..++|.++. .|.....++..|+.++.+.+
T Consensus 924 ~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 924 HTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDV--ALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHH--HTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHh--hhcCCCCCHHHHHHHHHHHH
Confidence 5777888777766655432 222222 2356677777777777777777775544 34455567899998888888
Q ss_pred HHHHHHHHHHHHHHhhC
Q 001023 1134 AALIPRFLVKFLYQYYY 1150 (1185)
Q Consensus 1134 ~~~l~~~~~k~~~r~f~ 1150 (1185)
..++..++.|++.|++.
T Consensus 1002 ~~~~~~e~~k~~~r~~~ 1018 (1028)
T 2zxe_A 1002 IIFLYDEMRRFIIRRSP 1018 (1028)
T ss_dssp HHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHccC
Confidence 88889999998887763
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-97 Score=943.55 Aligned_cols=771 Identities=17% Similarity=0.194 Sum_probs=578.3
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHH
Q 001023 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1185)
Q Consensus 85 ~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~~s~i~~~~ed 164 (1185)
+...|+++||+|.++..|+++| +.+++||..+.+++++++++++++ .+.|...+.++++++++++.+++++
T Consensus 92 ea~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~-----~g~~~~~~~i~~vv~i~~~i~~~qe 162 (920)
T 1mhs_A 92 EVVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG-----LEDWVDFGVICGLLLLNAVVGFVQE 162 (920)
T ss_dssp HHHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT-----CSCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444788999999999998877 778899999999999999999887 4667777778888899999999999
Q ss_pred HHHhhhhHHhh---cceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceee
Q 001023 165 YRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1185)
Q Consensus 165 ~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K 241 (1185)
++..++.+.++ +.+++|+|||++++|++++|+|||||.|++||.||||++|++++ +.+.||||+|||||.|+.|
T Consensus 163 ~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K 239 (920)
T 1mhs_A 163 FQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDK 239 (920)
T ss_dssp HHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEEC
T ss_pred HHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEe
Confidence 99998876655 57899999999999999999999999999999999999999965 2279999999999999999
Q ss_pred cccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhhh--
Q 001023 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML-- 319 (1185)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~~-- 319 (1185)
.+++.. |+||++.+|. +.++|++||.+|.+.+
T Consensus 240 ~~gd~v-------------------------~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~ 273 (920)
T 1mhs_A 240 HKGDQV-------------------------FASSAVKRGE---------------------AFVVITATGDNTFVGRAA 273 (920)
T ss_dssp CSSCEE-------------------------CSCBCCSCCC---------------------EEEEEEECSTTCSTTTTT
T ss_pred cCCCee-------------------------ecCceEecce---------------------EEEEEEEeCCcCHHHHHH
Confidence 887655 7777666665 9999999999997654
Q ss_pred -ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHH
Q 001023 320 -NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEIL 398 (1185)
Q Consensus 320 -n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~ 398 (1185)
....++.+++++++.++++..++++++++++++.++.+.+ .. ..+.
T Consensus 274 ~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~---~~------------------------------~~~~ 320 (920)
T 1mhs_A 274 ALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY---RS------------------------------NPIV 320 (920)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT---TT------------------------------CCHH
T ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC------------------------------CcHH
Confidence 3455677889999999999998887777666655432211 00 0123
Q ss_pred HHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCccccceeEE
Q 001023 399 FTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 478 (1185)
Q Consensus 399 ~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~ 478 (1185)
..+..++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++|+||||||||||+|+|+|
T Consensus 321 ~~l~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v 390 (920)
T 1mhs_A 321 QILEFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSL 390 (920)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCC
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeE
Confidence 367778999999999999999999998888777 7889999999999999999999999999999999999
Q ss_pred EEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhccccccccc
Q 001023 479 RCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558 (1185)
Q Consensus 479 ~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~ 558 (1185)
.+++..+. | ++ .+++.+.++|+....
T Consensus 391 ~~~~~~~g-~-------------------------------~~------------------~~ll~~a~l~~~~~~---- 416 (920)
T 1mhs_A 391 HDPYTVAG-V-------------------------------DP------------------EDLMLTACLAASRKK---- 416 (920)
T ss_dssp CCCBCCSC-C-------------------------------CC------------------THHHHHHHHSCCCSS----
T ss_pred EEEeecCC-C-------------------------------CH------------------HHHHHHHHHhcCCcc----
Confidence 87643210 0 00 124455667764321
Q ss_pred CCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEE
Q 001023 559 TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTL 638 (1185)
Q Consensus 559 ~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l 638 (1185)
.+.||.|.|+++++++.+.. .+... .|++++.+||+|.||||+++++.++|+.++
T Consensus 417 -----------~~~~P~e~Al~~~~~~~~~~-------------~~~~~-~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~ 471 (920)
T 1mhs_A 417 -----------KGIDAIDKAFLKSLKYYPRA-------------KSVLS-KYKVLQFHPFDPVSKKVVAVVESPQGERIT 471 (920)
T ss_dssp -----------CSCCSHHHHHHHHHHHSSSC-------------CGGGS-CCCEEEEEEEETTTTEEEEEECCSSSSCEE
T ss_pred -----------cCCChHHHHHHHHHHhcccc-------------hhhcc-ccceeEEeeccCCCCeEEEEEEeCCCcEEE
Confidence 12499999999999887641 11223 788999999999999999999988888899
Q ss_pred EEcCchhHHHHHHHhhc--chhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 001023 639 FVKGADTSMFSVIAKAL--NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 716 (1185)
Q Consensus 639 ~~KGa~~~i~~~~~~~~--~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~ 716 (1185)
++||||+.|+++|.... +++.++.+.+++++|+.+|+|||++|+|..
T Consensus 472 ~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~------------------------------- 520 (920)
T 1mhs_A 472 CVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG------------------------------- 520 (920)
T ss_dssp EEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS-------------------------------
T ss_pred EEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc-------------------------------
Confidence 99999999999996421 334567788899999999999999998631
Q ss_pred hhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHH
Q 001023 717 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLED 796 (1185)
Q Consensus 717 ~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~ 796 (1185)
|++++|+|+++++|++|++++++|+.|+++||+|||+|||+..||.+||++|||..... +...
T Consensus 521 --e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~---------- 583 (920)
T 1mhs_A 521 --EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER---------- 583 (920)
T ss_dssp --SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS----------
T ss_pred --ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcccc-----Cccc----------
Confidence 56899999999999999999999999999999999999999999999999999964210 0000
Q ss_pred HHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh
Q 001023 797 AIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR 876 (1185)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~ 876 (1185)
++++|. ..+.+++ +.++...++ +|||++|+||+.+|+.+|+
T Consensus 584 ------------------------------~~~~g~--~~~~~~e----l~~~~~~~~--V~arv~P~~K~~iV~~Lq~- 624 (920)
T 1mhs_A 584 ------------------------------LGLGGG--GDMPGSE----VYDFVEAAD--GFAEVFPQHKYNVVEILQQ- 624 (920)
T ss_dssp ------------------------------SSSCBC--CCGGGGG----GGTTTTTTS--CEESCCSTHHHHHHHHHHT-
T ss_pred ------------------------------eeecCc--ccCCHHH----HHHHHhhCe--EEEEeCHHHHHHHHHHHHh-
Confidence 011121 0011111 122233334 9999999999999999999
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhhHH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNAV 953 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~ni~ 953 (1185)
.|++|+|+|||+||+|||++|||||+|+ |++. |+++||+++.+.++ +..+ +.|||++|+|+++++.|.++.|+.
T Consensus 625 ~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~ 701 (920)
T 1mhs_A 625 RGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIH 701 (920)
T ss_dssp TTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999994 4454 88999999987444 7776 899999999999999999999998
Q ss_pred HHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHhH
Q 001023 954 LVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADT 1033 (1185)
Q Consensus 954 ~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~~ 1033 (1185)
+....+++..+.+++ +++.+++|.|++.+. |++++++.+.+.+ +.|+-... ..++ +..++.|
T Consensus 702 ~~~~~~~~~~~~~~~----l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~~~~---~~~~-----~~~~~~g 763 (920)
T 1mhs_A 702 LEIFLGLWIAILNRS----LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVKWNL---PKLW-----GMSVLLG 763 (920)
T ss_dssp HHHHHHHHHHSCSCC----CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCCCCS---SSCS-----SCHHHHH
T ss_pred HHHHHHHHHHHHhcc----CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCCchH---HHHH-----HHHHHHH
Confidence 754444433333433 667788888888775 9999988654321 34542211 1122 2223445
Q ss_pred HHHHhhheeec---cc--cccCCcccchhhhHHHHHHHHHHHHHHHHHhhcc----chhHhHHHHHHHHHHHHHHHHHHh
Q 001023 1034 LWQSVVIFFIP---FG--AYWDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR----WTWITHAVIWGSIIATLICVMIID 1104 (1185)
Q Consensus 1034 ~~~~~vif~~~---~~--~~~g~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~----~~~~~~~~i~~si~~~~i~~~i~~ 1104 (1185)
++.++..++.+ +. ...|...+.....+++|+++++...+.++. +++ |....+..+++++++..++...+.
T Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (920)
T 1mhs_A 764 VVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFI-TRANGPFWSSIPSWQLSGAIFLVDILATCFT 842 (920)
T ss_dssp HHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTS-SSCSSSCSCCSCTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHH-hccchhhhcCchHHHHHHHHHHHHHHHHHHH
Confidence 55544333221 11 111111122346788899888887766542 222 221234455555555555555454
Q ss_pred ccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001023 1105 AVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYY 1150 (1185)
Q Consensus 1105 ~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f~ 1150 (1185)
+.+.+. ....++..|+.++++.++.++...+.|++.++..
T Consensus 843 ~~~~f~------~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 882 (920)
T 1mhs_A 843 IWGWFE------HSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSV 882 (920)
T ss_dssp SSSSTT------SCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCC
T ss_pred Hhhhhc------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 444222 2334677888888777777888888886655543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-96 Score=929.23 Aligned_cols=781 Identities=16% Similarity=0.154 Sum_probs=559.4
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc--ccCccchhhhHHHHHHHHHHHHHH
Q 001023 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA--VFGRGVSILPLAFVLSVTAIKDAY 162 (1185)
Q Consensus 85 ~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~--~~~~~~~~~~l~~vi~~s~i~~~~ 162 (1185)
+..+|+++||+|.++..+++.| +.+++||.++++++++++++++++.+.. ....|...+.++++++++.+.+++
T Consensus 37 e~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 37 EGEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFI 112 (885)
T ss_dssp HHHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTT
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3445889999999999998777 6677899999999999999998874210 112556666777778888888999
Q ss_pred HHHHHhhhhHHh---hcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCce
Q 001023 163 EDYRRHRSDRIE---NNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239 (1185)
Q Consensus 163 ed~~r~k~d~~~---n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~ 239 (1185)
+++|..++.+.+ .+.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ ++||||+|||||.|+
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 999887775544 4678999999999999999999999999999999999999999654 689999999999999
Q ss_pred eecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhhh
Q 001023 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML 319 (1185)
Q Consensus 240 ~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~~ 319 (1185)
.|.+++.. |+||.+.+|. ++++|++||.+|.+.+
T Consensus 189 ~K~~g~~v-------------------------~~GT~v~~G~---------------------~~~~V~~tG~~T~~g~ 222 (885)
T 3b8c_A 189 TKHPGQEV-------------------------FSGSTCKQGE---------------------IEAVVIATGVHTFFGK 222 (885)
T ss_dssp CBSSCCCC-------------------------CSCCCCCSCC---------------------CCCBCCSCTTTTTSTT
T ss_pred EecCCCcc-------------------------ccCeEEeeeE---------------------EEEEEEEcCcccHHHH
Confidence 99887655 6777666665 8999999999997654
Q ss_pred ccC--CCCCCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhh
Q 001023 320 NSS--GAPSKRSWLEMHMNSEIIKLSF-FLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLE 396 (1185)
Q Consensus 320 n~~--~~~~k~s~le~~~~~~~~~l~~-~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~ 396 (1185)
... +...+++++++.++++..+++. +++.++++.++.+.+ .. ..|
T Consensus 223 i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~------~~~----------------------- 270 (885)
T 3b8c_A 223 AAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI---QR------RKY----------------------- 270 (885)
T ss_dssp CCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT---TC------SCS-----------------------
T ss_pred HHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cc------CcH-----------------------
Confidence 322 1246789999999999876433 222232222211111 00 011
Q ss_pred HHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCCCcccccee
Q 001023 397 ILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKM 476 (1185)
Q Consensus 397 ~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m 476 (1185)
...+..++.+++.+|||+||++++++..+++..+ +++++++|+++.+|+||++|+||||||||||+|+|
T Consensus 271 -~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m 339 (885)
T 3b8c_A 271 -RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKL 339 (885)
T ss_dssp -TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCC
T ss_pred -HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCce
Confidence 1157788999999999999999999888877666 88999999999999999999999999999999999
Q ss_pred EEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhHHHHHHHHHhhccccccc
Q 001023 477 EFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLV 556 (1185)
Q Consensus 477 ~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~ 556 (1185)
+|.++.+. .++. ....++++...++|+...
T Consensus 340 ~v~~~~~~--~~~~---------------------------------------------~~~~~~ll~~aa~~~~~~--- 369 (885)
T 3b8c_A 340 SVDKNLVE--VFCK---------------------------------------------GVEKDQVLLFAAMASRVE--- 369 (885)
T ss_dssp CCCSCCCC--SSCS---------------------------------------------STTHHHHHHHHHHHCCSS---
T ss_pred EEEEEEEe--ccCC---------------------------------------------CCCHHHHHHHHHHHhCCC---
Confidence 99632210 0100 001134566778887542
Q ss_pred ccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcE
Q 001023 557 VDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTV 636 (1185)
Q Consensus 557 ~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~ 636 (1185)
++||.|.|+++++.+.. .... .|++++.+||+|.||||+++++..+|+.
T Consensus 370 --------------~~~p~~~Al~~~~~~~~----------------~~~~-~~~~~~~~pF~s~~k~~sv~~~~~~g~~ 418 (885)
T 3b8c_A 370 --------------NQDAIDAAMVGMLADPK----------------EARA-GIREVHFLPFNPVDKRTALTYIDGSGNW 418 (885)
T ss_dssp --------------SCCSHHHHHHHTTCCTT----------------CCCC-SSCCBCCCCCCTTTCCCCCBBCSSSSCB
T ss_pred --------------CCCchHHHHHHHhhchh----------------hHhh-cCceeecccCCcccceEEEEEEecCCcE
Confidence 26999999999874310 0123 6788889999999999999999878888
Q ss_pred EEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 001023 637 TLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 716 (1185)
Q Consensus 637 ~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~ 716 (1185)
++++||||+.|+++|... ++.++.+.+++++|+++|+||+++|+|++++++. +
T Consensus 419 ~~~~KGa~e~il~~c~~~--~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~-------------------------~ 471 (885)
T 3b8c_A 419 HRVSKGAPEQILELAKAS--NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK-------------------------E 471 (885)
T ss_dssp CBCCCCSGGGTSSSSCCC--STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS-------------------------S
T ss_pred EEEEeCCHHHHHHhccCc--hhhHHHHHHHHHHHHhCCCeEEEEEEeccccccc-------------------------c
Confidence 899999999999998642 3445678888999999999999999998865321 3
Q ss_pred hhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHH
Q 001023 717 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLED 796 (1185)
Q Consensus 717 ~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~ 796 (1185)
..|+|++|+|+++++|++|++++++|+.|+++||+|||+|||+..||.+||+++||..+... ..
T Consensus 472 ~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~-----~~----------- 535 (885)
T 3b8c_A 472 SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----SS----------- 535 (885)
T ss_dssp CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCST-----TS-----------
T ss_pred ccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCC-----cc-----------
Confidence 56889999999999999999999999999999999999999999999999999999642100 00
Q ss_pred HHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccH-HHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHh
Q 001023 797 AIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS-ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKT 875 (1185)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~-~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~ 875 (1185)
++.|..++..+.+ ++ .++...++ +|||++|+||+.+|+.+|+
T Consensus 536 -------------------------------~l~g~~~~~~~~~~~l----~~~~~~~~--v~arv~P~~K~~iV~~lq~ 578 (885)
T 3b8c_A 536 -------------------------------ALLGTHKDANLASIPV----EELIEKAD--GFAGVFPEHKYEIVKKLQE 578 (885)
T ss_dssp -------------------------------SCCBGGGGTTSCCSCH----HHHHHTSC--CEECCCHHHHHHHHHHHHH
T ss_pred -------------------------------eeeccccccccchhHH----HHHHhhCc--EEEEECHHHHHHHHHHHHH
Confidence 1223333221111 11 22333444 9999999999999999999
Q ss_pred hCCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhhH
Q 001023 876 RTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNA 952 (1185)
Q Consensus 876 ~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~ni 952 (1185)
.|+.|+|+|||+||+|||++|||||+|+ |++. |+++||+++.++++ +..+ +.+||++|+|+++++.|.+..|+
T Consensus 579 -~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~ 654 (885)
T 3b8c_A 579 -RKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITI 654 (885)
T ss_dssp -TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999995 4444 88999999988665 5555 89999999999999999999998
Q ss_pred HHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcccccccCCcccchhHHHHHHHh
Q 001023 953 VLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMAD 1032 (1185)
Q Consensus 953 ~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~~~~~~ 1032 (1185)
...+..++..+ ++ ..++++++++|.|++.+..| ++++....++ |+ .++...+ ...++.+++.
T Consensus 655 ~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~--------~~----~p~~~~~-~~~~~~~~~~ 716 (885)
T 3b8c_A 655 RIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDRVKP--------SP----TPDSWKL-KEIFATGVVL 716 (885)
T ss_dssp TTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCCCCC--------SS----CCCSTTT-TTTTTTHHHH
T ss_pred HHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-HhhcccccCc--------cc----CCcchhH-HHHHHHHHHH
Confidence 75554444433 22 24688999999999998776 6666422111 11 1222222 3345556677
Q ss_pred HHHHHhhheeecccccc-CC---ccc-------chhhhHHHHHHHHHHHHHHHHHhhccch--hHhHH---HHHHHHHHH
Q 001023 1033 TLWQSVVIFFIPFGAYW-DS---TID-------VSSIGDLWTLAVVILVNIHLAMDVIRWT--WITHA---VIWGSIIAT 1096 (1185)
Q Consensus 1033 ~~~~~~vif~~~~~~~~-g~---~~~-------~~~~~~~~~~~~v~~~~~~~~l~~~~~~--~~~~~---~i~~si~~~ 1096 (1185)
|++.+++.++++++... |. .++ .....+++|+..+++..+ .++.+++.. |..+. +++..++..
T Consensus 717 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~~~~~~~~~~~~~~~~~~~~ 795 (885)
T 3b8c_A 717 GGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRSWSFVERPGALLMIAFLIAQ 795 (885)
T ss_dssp HSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCTTTSTTSTTTTTSGGGSSTT
T ss_pred HHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCCCCcccCccHHHHHHHHHHH
Confidence 88888877665433221 10 011 112334444433333334 345444432 22221 122211111
Q ss_pred HHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001023 1097 LICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYY 1150 (1185)
Q Consensus 1097 ~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~~~l~~~~~k~~~r~f~ 1150 (1185)
++.+++..+.+ .. .+.....++..|+.+++..++.+++..+.|++.|+..
T Consensus 796 ~~~~~~~~~~~---~~-~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 845 (885)
T 3b8c_A 796 LIATLIAVYAN---WE-FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYIL 845 (885)
T ss_dssp TTTTSSSSSCC---CC-SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC-
T ss_pred HHHHHHHHhcc---cc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11111111110 00 0112334566788777777778888899998876643
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-71 Score=691.91 Aligned_cols=497 Identities=18% Similarity=0.215 Sum_probs=414.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhhhHHhh------cceEEEEe-CCeEEEEeeeccccccEEEEcCCCccCCceeEee
Q 001023 145 SILPLAFVLSVTAIKDAYEDYRRHRSDRIEN------NRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLS 217 (1185)
Q Consensus 145 ~~~~l~~vi~~s~i~~~~ed~~r~k~d~~~n------~~~~~V~r-~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ 217 (1185)
++-..++++++..+.+++|++.|+|+.+.++ +.+++|+| ||++++|++++|+|||+|+|++||.||||++|++
T Consensus 187 yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 266 (736)
T 3rfu_A 187 YFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE 266 (736)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE
Confidence 3344456777888899999999988765443 67888887 9999999999999999999999999999999998
Q ss_pred ccCCCCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecce
Q 001023 218 TSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCE 297 (1185)
Q Consensus 218 ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~ 297 (1185)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 -----G~~~VDES~LTGES~Pv~K~~gd~v-------------------------~~Gt~~~~G~--------------- 301 (736)
T 3rfu_A 267 -----GRSFVDESMVTGEPIPVAKEASAKV-------------------------IGATINQTGS--------------- 301 (736)
T ss_dssp -----SCEEEECSSSTTCSSCEEECTTCEE-------------------------CTTCEEESCC---------------
T ss_pred -----CceEeeecccCCccccEEeccCCcC-------------------------CCceEeccce---------------
Confidence 7799999999999999999999877 8888888877
Q ss_pred eecCCeEEEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccc
Q 001023 298 LKNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYY 374 (1185)
Q Consensus 298 l~nt~~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wy 374 (1185)
+++.|++||.+| ++++...+++.+++++++.+|++..++++++++++++++++|.++.... .|
T Consensus 302 ------~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~~- 367 (736)
T 3rfu_A 302 ------FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------AL- 367 (736)
T ss_dssp ------CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------ST-
T ss_pred ------EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------hH-
Confidence 899999999999 5666667777889999999999999999999999999988876643210 01
Q ss_pred cccCCCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccc
Q 001023 375 RRKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNIN 454 (1185)
Q Consensus 375 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~ 454 (1185)
...+..++.+++.+|||+|+++++++...+...+ +++++++|+++.+
T Consensus 368 -----------------------~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~al 414 (736)
T 3rfu_A 368 -----------------------SYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEAL 414 (736)
T ss_dssp -----------------------THHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHH
T ss_pred -----------------------HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHH
Confidence 2268889999999999999999999999888776 7899999999999
Q ss_pred ccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCc
Q 001023 455 EDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTE 534 (1185)
Q Consensus 455 E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 534 (1185)
|+||++|+||||||||||+|+|++.++..+|.. +++
T Consensus 415 E~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------------------------~~~------------ 450 (736)
T 3rfu_A 415 ERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV--------------------------------EDN------------ 450 (736)
T ss_dssp HHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC--------------------------------HHH------------
T ss_pred HHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC--------------------------------HHH------------
Confidence 999999999999999999999999998733210 111
Q ss_pred cchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEE
Q 001023 535 EGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLG 614 (1185)
Q Consensus 535 ~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~ 614 (1185)
++...+ ++. +.++||++.|++++|++.|+.+. .
T Consensus 451 -------~l~~aa---~le---------------~~s~hPla~Aiv~~a~~~~~~~~----------------------~ 483 (736)
T 3rfu_A 451 -------ALALAA---ALE---------------HQSEHPLANAIVHAAKEKGLSLG----------------------S 483 (736)
T ss_dssp -------HHHHHH---HHH---------------HSSCCHHHHHHHHHHHTTCCCCC----------------------C
T ss_pred -------HHHHHH---HHh---------------hcCCChHHHHHHHHHHhcCCCcc----------------------C
Confidence 111111 111 23579999999999998765321 2
Q ss_pred eecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHH
Q 001023 615 LHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQ 694 (1185)
Q Consensus 615 ~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~ 694 (1185)
..+|++.+++. +.....+.. +.+|+++.+.+... ......+.+++++.+|+|++++|+
T Consensus 484 ~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~G~~vl~va~------------ 541 (736)
T 3rfu_A 484 VEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGG------DNAPLFEKADELRGKGASVMFMAV------------ 541 (736)
T ss_dssp CSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCC------CCHHHHHHHHHHHHTTCEEEEEEE------------
T ss_pred cccccccCCce-EEEEECCEE---EEEcCHHHHHHcCC------ChhHHHHHHHHHHhcCCeEEEEEE------------
Confidence 34677776653 222222333 34599988765321 123456778899999999999997
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 695 SSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 695 ~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 542 --------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~ 595 (736)
T 3rfu_A 542 --------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK 595 (736)
T ss_dssp --------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC
T ss_pred --------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE
Confidence 778999999999999999999999999999999999999999999999999842
Q ss_pred CCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCC
Q 001023 775 SKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCS 854 (1185)
Q Consensus 775 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~ 854 (1185)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecchhh--HHHHHHH
Q 001023 855 VVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFRF--LVTLLLV 931 (1185)
Q Consensus 855 ~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~~--l~~lll~ 931 (1185)
++++++|+||..+|+.+|+ .|+.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+.++ +..+ +.
T Consensus 596 --v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i~~a-i~ 669 (736)
T 3rfu_A 596 --VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGIAKA-RR 669 (736)
T ss_dssp --EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTHHHH-HH
T ss_pred --EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHHHHHHH-HH
Confidence 9999999999999999999 799999999999999999999999999 56665 99999999976444 6666 89
Q ss_pred HhhHHHHHhhhhhhhhhhhhHHHHHHH
Q 001023 932 HGHWNYQRMGYMILYNFYRNAVLVFVL 958 (1185)
Q Consensus 932 ~Gr~~~~ri~~~i~~~~~~ni~~~~~~ 958 (1185)
+||..++++++++.|.|.+|++.+.+.
T Consensus 670 ~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 670 LSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999876554
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-69 Score=681.79 Aligned_cols=489 Identities=21% Similarity=0.247 Sum_probs=403.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhhHH------hhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCC
Q 001023 148 PLAFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDP 221 (1185)
Q Consensus 148 ~l~~vi~~s~i~~~~ed~~r~k~d~~------~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~ 221 (1185)
..++++++..+.+++|++.++|+++. +.+.+++|+|||++++++|++|+|||+|.|++||.||||++|++
T Consensus 176 ~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 251 (723)
T 3j09_A 176 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 251 (723)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE----
Confidence 34466667788999999999887443 34678999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecC
Q 001023 222 TGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNT 301 (1185)
Q Consensus 222 ~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt 301 (1185)
|.|+||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 252 -G~~~VdeS~LTGES~pv~K~~g~~v-------------------------~~Gt~~~~g~------------------- 286 (723)
T 3j09_A 252 -GESYVDESMISGEPVPVLKSKGDEV-------------------------FGATINNTGV------------------- 286 (723)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE-------------------------CTTCEECSSC-------------------
T ss_pred -CCeEEecccccCCCcceeecCCCee-------------------------ccceEEecCc-------------------
Confidence 7799999999999999999988766 7777766655
Q ss_pred CeEEEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccC
Q 001023 302 SWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKD 378 (1185)
Q Consensus 302 ~~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~ 378 (1185)
+.+.|++||.+| ++++....++.+++++++.+|++..++++++++++++++++|.++... +|
T Consensus 287 --~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~----- 351 (723)
T 3j09_A 287 --LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PL----- 351 (723)
T ss_dssp --EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TT-----
T ss_pred --EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cH-----
Confidence 999999999999 667778888999999999999999999999998888887665432110 11
Q ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCccccccc
Q 001023 379 FSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLG 458 (1185)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG 458 (1185)
...+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+||
T Consensus 352 -------------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg 402 (723)
T 3j09_A 352 -------------------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAE 402 (723)
T ss_dssp -------------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHGG
T ss_pred -------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHhh
Confidence 1157788999999999999999999998888766 78999999999999999
Q ss_pred ceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchh
Q 001023 459 QIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKH 538 (1185)
Q Consensus 459 ~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 538 (1185)
++|+||||||||||+|+|+|.++...+.. +
T Consensus 403 ~v~~i~fDKTGTLT~g~~~v~~~~~~~~~--------------------------------~------------------ 432 (723)
T 3j09_A 403 KVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------E------------------ 432 (723)
T ss_dssp GCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------------------H------------------
T ss_pred cCCEEEEcCCCccccCceEEEEEEeCCCC--------------------------------H------------------
Confidence 99999999999999999999998764310 1
Q ss_pred HHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecC
Q 001023 539 VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEF 618 (1185)
Q Consensus 539 ~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F 618 (1185)
.+++...+.|+. .++||++.|+++++++.|+.+.... .++. .+
T Consensus 433 -~~~l~~aa~~e~------------------~s~hP~~~Ai~~~a~~~~~~~~~~~--------------~~~~---~~- 475 (723)
T 3j09_A 433 -RELLRLAAIAER------------------RSEHPIAEAIVKKALEHGIELGEPE--------------KVEV---IA- 475 (723)
T ss_dssp -HHHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCSCC--------------CCEE---ET-
T ss_pred -HHHHHHHHHHhc------------------cCCCchhHHHHHHHHhcCCCcCCcc--------------ceEE---ec-
Confidence 123334444422 3469999999999999887532211 1110 00
Q ss_pred CCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001023 619 DSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 698 (1185)
Q Consensus 619 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~ 698 (1185)
.+.... . .+.+|+++.+.+. +....+.+.+++++++.+|+|++++|+
T Consensus 476 ---g~g~~~------~---~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~va~---------------- 522 (723)
T 3j09_A 476 ---GEGVVA------D---GILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR---------------- 522 (723)
T ss_dssp ---TTEEEE------T---TEEEECHHHHHHT-----TCCCCHHHHHHHHHHHTTTCEEEEEEE----------------
T ss_pred ---CCceEE------E---EEEECCHHHHHhc-----CCCccHHHHHHHHHHHhcCCeEEEEEE----------------
Confidence 111111 1 2345888766442 223345678888999999999999997
Q ss_pred HHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCce
Q 001023 699 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 778 (1185)
Q Consensus 699 ~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~ 778 (1185)
|++++|+++++|++|++++++|+.|+++||++||+|||+.++|..+|+++|+..
T Consensus 523 ----------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~---- 576 (723)
T 3j09_A 523 ----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---- 576 (723)
T ss_dssp ----------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----
T ss_pred ----------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE----
Confidence 789999999999999999999999999999999999999999999999999831
Q ss_pred EEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEE
Q 001023 779 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 858 (1185)
Q Consensus 779 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~ 858 (1185)
++
T Consensus 577 ------------------------------------------------------------------------------~~ 578 (723)
T 3j09_A 577 ------------------------------------------------------------------------------VI 578 (723)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------EE
Confidence 99
Q ss_pred EecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecc--hhhHHHHHHHHhhH
Q 001023 859 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHW 935 (1185)
Q Consensus 859 ~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr~ 935 (1185)
+|++|+||+.+|+.+|+ . +.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+..+ +.+||+
T Consensus 579 ~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i~~~r~ 653 (723)
T 3j09_A 579 AEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSRK 653 (723)
T ss_dssp CSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH-HHHHHH
T ss_pred ccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH-HHHHHH
Confidence 99999999999999998 4 8999999999999999999999999 55555 89999999965 4447776 789999
Q ss_pred HHHHhhhhhhhhhhhhHHHHHHH
Q 001023 936 NYQRMGYMILYNFYRNAVLVFVL 958 (1185)
Q Consensus 936 ~~~ri~~~i~~~~~~ni~~~~~~ 958 (1185)
.++++++++.|.|++|++.+.+.
T Consensus 654 ~~~~i~~nl~~a~~~n~~~i~~a 676 (723)
T 3j09_A 654 TMSKIKQNIFWALIYNVILIPAA 676 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-69 Score=673.36 Aligned_cols=488 Identities=21% Similarity=0.244 Sum_probs=402.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhH------HhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCC
Q 001023 149 LAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPT 222 (1185)
Q Consensus 149 l~~vi~~s~i~~~~ed~~r~k~d~------~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~ 222 (1185)
.++++++..+.+++|++.++|+.+ ++.+.+++|+|||+++++++++|+|||+|+|++||.||||++|++
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~----- 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE----- 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE-----
Confidence 346666678889999999988643 345688999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCCCCCceeecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCC
Q 001023 223 GVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTS 302 (1185)
Q Consensus 223 G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~ 302 (1185)
|.|+||||+|||||.|+.|++++.. |+||++.+|.
T Consensus 174 G~~~VdeS~LTGES~Pv~K~~g~~v-------------------------~~Gt~~~~g~-------------------- 208 (645)
T 3j08_A 174 GESYVDESMISGEPVPVLKSKGDEV-------------------------FGATINNTGV-------------------- 208 (645)
T ss_dssp CCEEEECHHHHCCSSCEEECTTCEE-------------------------CTTCEECSSC--------------------
T ss_pred CcEEEEcccccCCCCceecCCCCEe-------------------------eccEEEecCc--------------------
Confidence 7799999999999999999988766 7777776665
Q ss_pred eEEEEEEEecccc---hhhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCC
Q 001023 303 WALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDF 379 (1185)
Q Consensus 303 ~i~gvVv~tG~~T---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~ 379 (1185)
+++.|++||.+| ++++...+++.+++++++.+|++..++++++++++++++++|.++... +|.
T Consensus 209 -~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~----- 274 (645)
T 3j08_A 209 -LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL----- 274 (645)
T ss_dssp -EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCC-----
T ss_pred -EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH-----
Confidence 999999999999 667778888899999999999999999999999888887765432110 111
Q ss_pred CCCCCCCCcccccchhhHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccc
Q 001023 380 SEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQ 459 (1185)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~ 459 (1185)
..+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+||+
T Consensus 275 -------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg~ 325 (645)
T 3j08_A 275 -------------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAEK 325 (645)
T ss_dssp -------------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGGG
T ss_pred -------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhhC
Confidence 145667889999999999999999998888776 789999999999999999
Q ss_pred eeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchhH
Q 001023 460 IKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHV 539 (1185)
Q Consensus 460 Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 539 (1185)
+|+||||||||||+|+|+|.++...+.. +
T Consensus 326 v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------------~------------------- 354 (645)
T 3j08_A 326 VTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------E------------------- 354 (645)
T ss_dssp CCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------------------H-------------------
T ss_pred CCEEEEcCcccccCCCeEEEEEEeCCCC--------------------------------H-------------------
Confidence 9999999999999999999999765310 1
Q ss_pred HHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCC
Q 001023 540 YDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFD 619 (1185)
Q Consensus 540 ~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~ 619 (1185)
.+++...+.|+. .++||++.|+++++++.|+...... .++. .+
T Consensus 355 ~~~l~~aa~~e~------------------~s~hPla~Aiv~~a~~~g~~~~~~~--------------~~~~---~~-- 397 (645)
T 3j08_A 355 RELLRLAAIAER------------------RSEHPIAEAIVKKALEHGIELGEPE--------------KVEV---IA-- 397 (645)
T ss_dssp HHHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCSCC--------------CCEE---ET--
T ss_pred HHHHHHHHHHhh------------------cCCChhHHHHHHHHHhcCCCcCCcc--------------ceEE---ec--
Confidence 133444444432 2469999999999999887532211 1110 00
Q ss_pred CCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001023 620 SDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 699 (1185)
Q Consensus 620 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~ 699 (1185)
.+.... .. +++|+++.+.+. +....+.+.+++++++.+|+|++++|+
T Consensus 398 --g~g~~~------~~---v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~l~va~----------------- 444 (645)
T 3j08_A 398 --GEGVVA------DG---ILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR----------------- 444 (645)
T ss_dssp --TTEEEE------TT---EEEECHHHHHHT-----TCCCCHHHHHHHHHHHTTTCCCEEEEE-----------------
T ss_pred --CCceEE------EE---EEECCHHHHHhc-----CCCccHHHHHHHHHHHhcCCeEEEEEE-----------------
Confidence 111111 12 345888766442 223345677888999999999999997
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceE
Q 001023 700 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 779 (1185)
Q Consensus 700 a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~ 779 (1185)
|++++|+++++|++|++++++|+.|+++||++||+|||+.++|..+|+++|+..
T Consensus 445 ---------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~----- 498 (645)
T 3j08_A 445 ---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----- 498 (645)
T ss_dssp ---------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----
T ss_pred ---------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-----
Confidence 789999999999999999999999999999999999999999999999999831
Q ss_pred EEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE
Q 001023 780 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 859 (1185)
Q Consensus 780 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~ 859 (1185)
+++
T Consensus 499 -----------------------------------------------------------------------------~~~ 501 (645)
T 3j08_A 499 -----------------------------------------------------------------------------VIA 501 (645)
T ss_dssp -----------------------------------------------------------------------------EEC
T ss_pred -----------------------------------------------------------------------------EEE
Confidence 999
Q ss_pred ecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEe-cCcchhHHhhcCceeecc--hhhHHHHHHHHhhHH
Q 001023 860 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWN 936 (1185)
Q Consensus 860 r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~--f~~l~~lll~~Gr~~ 936 (1185)
|++|+||+.+++.+++ . +.|+|+|||.||++||++|||||++ +|.+. |+++||+++.+ ++-+..+ +.+||+.
T Consensus 502 ~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i~~~r~~ 576 (645)
T 3j08_A 502 EVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSRKT 576 (645)
T ss_dssp SCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSCCTTHHHHH-HHHHHHH
T ss_pred eCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHHHH
Confidence 9999999999999998 4 8999999999999999999999999 55555 89999999965 5557776 7899999
Q ss_pred HHHhhhhhhhhhhhhHHHHHHH
Q 001023 937 YQRMGYMILYNFYRNAVLVFVL 958 (1185)
Q Consensus 937 ~~ri~~~i~~~~~~ni~~~~~~ 958 (1185)
++++++++.|.|++|++.+.+.
T Consensus 577 ~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 577 MSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-25 Score=250.40 Aligned_cols=137 Identities=22% Similarity=0.357 Sum_probs=118.1
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHh
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 800 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~ 800 (1185)
+-.+.|.+.++|+++||++++|+.|++.|++++|+|||+..++..++..+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 456889999999999999999999999999999999999999999999988732
Q ss_pred hcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCe
Q 001023 801 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 880 (1185)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~ 880 (1185)
+|+.+.|++|..+++.++. .+..
T Consensus 178 --------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~ 200 (263)
T 2yj3_A 178 --------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNK 200 (263)
Confidence 5566669999999999987 6788
Q ss_pred EEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceee--cchhhHHHHHHHHhhHHHHHhhhh
Q 001023 881 TLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAM--GQFRFLVTLLLVHGHWNYQRMGYM 943 (1185)
Q Consensus 881 vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i--~~f~~l~~lll~~Gr~~~~ri~~~ 943 (1185)
|+|||||.||++|+++|++||++. +.+. +...+|+++ .++.-+..+ +..+|..+++++++
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPSN 263 (263)
Confidence 999999999999999999999883 3333 677899999 666667666 78899999888753
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-21 Score=218.73 Aligned_cols=272 Identities=23% Similarity=0.281 Sum_probs=195.6
Q ss_pred cCCceeeccCcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccCh
Q 001023 442 SSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDP 521 (1185)
Q Consensus 442 ~~~~~~~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (1185)
+++++++|+++.+|.|+++++|+||||||||.+.+.+..+...+. . ++
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~------------------------------~~ 61 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D------------------------------ER 61 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C------------------------------HH
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C------------------------------HH
Confidence 889999999999999999999999999999999999988765321 0 11
Q ss_pred hHHHhhhcCCCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEE
Q 001023 522 HLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVID 601 (1185)
Q Consensus 522 ~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~ 601 (1185)
++ +.+|+++.. .+.||.+.|+.+++++.|+..... .
T Consensus 62 -------------------~~---l~~~~~~e~---------------~s~hp~~~a~~~~~~~~g~~~~~~--~----- 97 (287)
T 3a1c_A 62 -------------------EL---LRLAAIAER---------------RSEHPIAEAIVKKALEHGIELGEP--E----- 97 (287)
T ss_dssp -------------------HH---HHHHHHHTT---------------TCCSHHHHHHHHHHHHTTCCCCCC--S-----
T ss_pred -------------------HH---HHHHHHHhh---------------cCCCHHHHHHHHHHHhcCCCcccc--c-----
Confidence 12 223333322 357999999999999988752210 0
Q ss_pred ecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEE
Q 001023 602 IQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVG 681 (1185)
Q Consensus 602 ~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A 681 (1185)
.+.-+ ..+.+.. .. +.+|.++.+.+. +...++.+....+.|...|.++++++
T Consensus 98 -------~~~~~-------~G~~~~~------~~---~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~i~~~ 149 (287)
T 3a1c_A 98 -------KVEVI-------AGEGVVA------DG---ILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVA 149 (287)
T ss_dssp -------CEEEE-------TTTEEEE------TT---EEEECHHHHHHT-----TCCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred -------cceee-------cCCCeEE------EE---EEECCHHHHHhc-----CCCccHHHHHHHHHHHhCCCeEEEEE
Confidence 11100 0011110 11 234655443221 11111234556777888999999998
Q ss_pred EEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchh
Q 001023 682 MRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQE 761 (1185)
Q Consensus 682 ~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~e 761 (1185)
+ |..++|.+..++++.||+.++|+.|+++|+++.++||+...
T Consensus 150 ~--------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~ 191 (287)
T 3a1c_A 150 R--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR 191 (287)
T ss_dssp E--------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred E--------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHH
Confidence 7 56789999999999999999999999999999999999999
Q ss_pred hHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHH
Q 001023 762 TAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSE 841 (1185)
Q Consensus 762 TAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~ 841 (1185)
.+..+...+|+..
T Consensus 192 ~~~~~l~~~gl~~------------------------------------------------------------------- 204 (287)
T 3a1c_A 192 SAEAISRELNLDL------------------------------------------------------------------- 204 (287)
T ss_dssp HHHHHHHHHTCSE-------------------------------------------------------------------
T ss_pred HHHHHHHHhCCce-------------------------------------------------------------------
Confidence 9999999888731
Q ss_pred HHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceee--
Q 001023 842 LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAM-- 919 (1185)
Q Consensus 842 ~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i-- 919 (1185)
+|+.+.|..|...++.+.. . ..++||||+.||+.|.+.|++||++..... .+...+|+++
T Consensus 205 ---------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~-~~~~~ad~v~~~ 266 (287)
T 3a1c_A 205 ---------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSD-VAVESGDIVLIR 266 (287)
T ss_dssp ---------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCSC-CSSCCSSEEESS
T ss_pred ---------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCCH-HHHhhCCEEEeC
Confidence 5666679999999999887 5 889999999999999999999998843221 1456799999
Q ss_pred cchhhHHHHHHHHhhHHHHHhh
Q 001023 920 GQFRFLVTLLLVHGHWNYQRMG 941 (1185)
Q Consensus 920 ~~f~~l~~lll~~Gr~~~~ri~ 941 (1185)
.++.-+..+ +..+|.++++++
T Consensus 267 ~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 267 DDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp SCTHHHHHH-HHTTC-------
T ss_pred CCHHHHHHH-HHHHHHHHHhhC
Confidence 777777766 788998888764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-19 Score=198.49 Aligned_cols=273 Identities=24% Similarity=0.283 Sum_probs=186.5
Q ss_pred eccCcccccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhh
Q 001023 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLS 527 (1185)
Q Consensus 448 ~r~~~~~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 527 (1185)
+|+++.+|.|++++.|+||+|||||.|+|++..+...+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------------------------------------- 39 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------------------------------------- 39 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------------------------------------
Confidence 478899999999999999999999999999998764321
Q ss_pred hcCCCCccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCcee
Q 001023 528 RSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQ 607 (1185)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~ 607 (1185)
...+++..++.+.. .+.+|...++.++++..|+..... .
T Consensus 40 ----------~~~~~~~~~~~~~~------------------~s~~~~~~a~~~~~~~~g~~~~~~---~---------- 78 (280)
T 3skx_A 40 ----------SEDELLQIAASLEA------------------RSEHPIAAAIVEEAEKRGFGLTEV---E---------- 78 (280)
T ss_dssp ----------CHHHHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCCC---E----------
T ss_pred ----------CHHHHHHHHHHhhc------------------cCCCHHHHHHHHHHHhcCCCCCCc---c----------
Confidence 01123333333321 235889999999999988743210 0
Q ss_pred eeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCH
Q 001023 608 SRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSA 687 (1185)
Q Consensus 608 ~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~ 687 (1185)
.+. .++ .+.+...+ ++.. +..|.++.+.+..... ...+.++...|.+.+.+++
T Consensus 79 -~~~---~~~----g~~~~~~~---~~~~--~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~----- 131 (280)
T 3skx_A 79 -EFR---AIP----GKGVEGIV---NGRR--YMVVSPGYIRELGIKT---------DESVEKLKQQGKTVVFILK----- 131 (280)
T ss_dssp -EEE---EET----TTEEEEEE---TTEE--EEEECHHHHHHTTCCC---------CTTHHHHHTTTCEEEEEEE-----
T ss_pred -cee---ecC----CCEEEEEE---CCEE--EEEecHHHHHHcCCCc---------hHHHHHHHhCCCeEEEEEE-----
Confidence 111 010 11222222 1211 1226655544322111 1234566778888888775
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHH
Q 001023 688 SEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767 (1185)
Q Consensus 688 ~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia 767 (1185)
+..++|.+.++|++++|+.++++.|++.|+++.++||+..+.+..+.
T Consensus 132 ---------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~ 178 (280)
T 3skx_A 132 ---------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178 (280)
T ss_dssp ---------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999
Q ss_pred HHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHH
Q 001023 768 YSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLF 847 (1185)
Q Consensus 768 ~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~ 847 (1185)
..+|+..
T Consensus 179 ~~~gl~~------------------------------------------------------------------------- 185 (280)
T 3skx_A 179 EELGLDD------------------------------------------------------------------------- 185 (280)
T ss_dssp HHHTCSE-------------------------------------------------------------------------
T ss_pred HHcCChh-------------------------------------------------------------------------
Confidence 9988732
Q ss_pred HHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceee--cchhh
Q 001023 848 QLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAM--GQFRF 924 (1185)
Q Consensus 848 ~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i--~~f~~ 924 (1185)
.|..+.|.+|...++-+.+ .. .++|||||.||+.|++.|++||++.. .+. +..+||+++ .+..-
T Consensus 186 ---------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~--~~~~a~~~~~~~~~~~ 252 (280)
T 3skx_A 186 ---------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGAGTDV--AVETADIVLVRNDPRD 252 (280)
T ss_dssp ---------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSCCSSS--CCCSSSEECSSCCTHH
T ss_pred ---------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecCCcHH--HHhhCCEEEeCCCHHH
Confidence 6677789999999998887 33 67999999999999999999999943 333 677899998 55666
Q ss_pred HHHHHHHHhhHHHHHhhhhhhhhhh
Q 001023 925 LVTLLLVHGHWNYQRMGYMILYNFY 949 (1185)
Q Consensus 925 l~~lll~~Gr~~~~ri~~~i~~~~~ 949 (1185)
+..+ +..+|..++++++++.|++.
T Consensus 253 l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 253 VAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHHH-HHHHHTCCC-----------
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 7776 67888888888887777653
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.80 E-value=5.5e-20 Score=174.80 Aligned_cols=98 Identities=22% Similarity=0.271 Sum_probs=90.2
Q ss_pred hhHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeecccccccc
Q 001023 170 SDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLL 249 (1185)
Q Consensus 170 ~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~ 249 (1185)
+...+.+.+++|+|+|+++++++++|+|||+|.|++||.||||++|++ |.++||||+|||||.|+.|.+++..
T Consensus 5 ~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~v-- 77 (113)
T 2hc8_A 5 KLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDEV-- 77 (113)
T ss_dssp HHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCEE--
T ss_pred HHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCEE--
Confidence 345677889999999999999999999999999999999999999999 6699999999999999999998777
Q ss_pred cCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhh
Q 001023 250 KVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM 318 (1185)
Q Consensus 250 ~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~ 318 (1185)
|+||++.+|. +.++|++||.+|.+.
T Consensus 78 -----------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~~ 102 (113)
T 2hc8_A 78 -----------------------FGATINNTGV---------------------LKIRATRVGGETLLA 102 (113)
T ss_dssp -----------------------CTTCEECSSC---------------------EEEEEEECGGGSHHH
T ss_pred -----------------------EeCCEEeece---------------------EEEEEEEecCcCHHH
Confidence 8999988887 999999999999653
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.4e-18 Score=165.47 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=86.6
Q ss_pred hHHhhcceEEEEeCCe------EEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeeccc
Q 001023 171 DRIENNRLANVLVNNQ------FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAK 244 (1185)
Q Consensus 171 d~~~n~~~~~V~r~g~------~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~ 244 (1185)
...+.+..++|+|+|. ++.++.++|+|||+|.|++||.||||++|++ |.+.||||+|||||.|+.|.++
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCCC
Confidence 3456688999999663 7889999999999999999999999999999 5579999999999999999998
Q ss_pred ccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchh
Q 001023 245 QETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1185)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki 317 (1185)
+.. |+||++.+|. +.+.|+.||.+|.+
T Consensus 87 ~~v-------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~ 113 (124)
T 2kij_A 87 STV-------------------------IAGSINQNGS---------------------LLICATHVGADTTL 113 (124)
T ss_dssp EEE-------------------------CTTCEEESSC---------------------CEEEECSCTTTCHH
T ss_pred CEE-------------------------EcCCEEeeeE---------------------EEEEEEEecccCHH
Confidence 877 8999998887 99999999999965
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.68 E-value=4.1e-17 Score=167.49 Aligned_cols=125 Identities=22% Similarity=0.277 Sum_probs=100.6
Q ss_pred CChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHH
Q 001023 572 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVI 651 (1185)
Q Consensus 572 ~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~ 651 (1185)
.+|.|.|+++++...+.. .... .|+++..+||+|+||||||+++.++|+.++++|||||.|+++|
T Consensus 33 ~n~~d~Ail~~~~~~~~~--------------~~~~-~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C 97 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESAR--------------SLAS-RWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVC 97 (170)
T ss_dssp CCHHHHHHHHTSCHHHHH--------------HHHH-HSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTE
T ss_pred CChHHHHHHHHHHhcChh--------------hhhh-cCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHh
Confidence 599999999987543210 0123 7999999999999999999999888899999999999999999
Q ss_pred Hhh--------cchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcE
Q 001023 652 AKA--------LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLC 723 (1185)
Q Consensus 652 ~~~--------~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~ 723 (1185)
+.. .+++.++.+.+.+++|+++|+|||++|||.++..+-. .....|+||+
T Consensus 98 ~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----------------------~~~~~E~~L~ 155 (170)
T 3gwi_A 98 SQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----------------------YQRADESDLI 155 (170)
T ss_dssp EEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----------------------CCGGGSCSEE
T ss_pred HHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----------------------cCccccCCcE
Confidence 742 1345678899999999999999999999998654200 0134589999
Q ss_pred EEEeeecccc
Q 001023 724 ILGASGIEDK 733 (1185)
Q Consensus 724 llG~~~ieD~ 733 (1185)
|+|++|+-|.
T Consensus 156 f~G~~g~~~~ 165 (170)
T 3gwi_A 156 LEGYIAFLDH 165 (170)
T ss_dssp EEEEEEEEC-
T ss_pred EEehhccccc
Confidence 9999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-14 Score=164.60 Aligned_cols=139 Identities=12% Similarity=0.081 Sum_probs=103.1
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCC
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 809 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1185)
..++++||++++++.|+++|+++.|+|||...++..+|+++|+...+..+..-... .
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~--------------------~--- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMD--------------------F--- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEE--------------------E---
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEE--------------------E---
Confidence 46899999999999999999999999999999999999999997655433211100 0
Q ss_pred CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcC
Q 001023 810 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAN 889 (1185)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~N 889 (1185)
. .......+.++... .+++..|.+|...+..+++ .++.|+|+|||+|
T Consensus 195 ----~-------~~~~~~~~~~~~i~---------------------~~~k~~~~~k~~~~~~~~~-~~~~v~~vGDGiN 241 (297)
T 4fe3_A 195 ----D-------ENGVLKGFKGELIH---------------------VFNKHDGALKNTDYFSQLK-DNSNIILLGDSQG 241 (297)
T ss_dssp ----C-------TTSBEEEECSSCCC---------------------TTCHHHHHHTCHHHHHHTT-TCCEEEEEESSGG
T ss_pred ----c-------ccceeEeccccccc---------------------hhhcccHHHHHHHHHHhhc-cCCEEEEEeCcHH
Confidence 0 00111122222111 5677789999998888887 7899999999999
Q ss_pred Chhhhh---hcceeEEec--Ccch----hHHhhcCceeecchhh
Q 001023 890 DVSMIQ---MADVGVGIS--GQEG----RQAVMSSDFAMGQFRF 924 (1185)
Q Consensus 890 Dv~mL~---~AdVGIgis--g~e~----~qA~~aSD~~i~~f~~ 924 (1185)
|+||++ .|||||+|. +.+. ..|.+++|+++.++++
T Consensus 242 Da~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 242 DLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp GGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred HHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCC
Confidence 999955 999999874 2111 1268999999998777
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.05 E-value=5.6e-10 Score=117.06 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=104.7
Q ss_pred EEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhc
Q 001023 723 CILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSK 802 (1185)
Q Consensus 723 ~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 802 (1185)
..++...++|.+ +|+.|+++|+++.++||+..+.+..++..+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred ccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCC
Q 001023 803 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSD 879 (1185)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~ 879 (1185)
++... ..|...++.+.+. ...
T Consensus 88 ------------------------------------------------------~f~~~--~~K~~~~~~~~~~~g~~~~ 111 (189)
T 3mn1_A 88 ------------------------------------------------------LFQGR--EDKLVVLDKLLAELQLGYE 111 (189)
T ss_dssp ------------------------------------------------------EECSC--SCHHHHHHHHHHHHTCCGG
T ss_pred ------------------------------------------------------HhcCc--CChHHHHHHHHHHcCCChh
Confidence 22221 6677777776654 346
Q ss_pred eEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc------hhhHHHHHHHHhhHHHHHhhhhhhhhhhhh
Q 001023 880 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWNYQRMGYMILYNFYRN 951 (1185)
Q Consensus 880 ~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~------f~~l~~lll~~Gr~~~~ri~~~i~~~~~~n 951 (1185)
.++||||+.||++|++.|++|+++..... .+...||+++.+ .+.+..+ +...|..++++.+.++|.+.+|
T Consensus 112 ~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 112 QVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC---
T ss_pred HEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccccc
Confidence 79999999999999999999999943322 267889999987 4556666 5567889999999999988766
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.74 E-value=2e-08 Score=115.13 Aligned_cols=150 Identities=21% Similarity=0.226 Sum_probs=96.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+.++++.|+++|+++.|+||+....+..++..+|+..--...+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~------------------------------- 226 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLE------------------------------- 226 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEE-------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeE-------------------------------
Confidence 6899999999999999999999999999999999999998421100000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEE-EecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC-CRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~-~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
+.+|..-.. +. --..++.|...++.+.+. ....|+|+|||.
T Consensus 227 ---------------~~d~~~tg~--------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~ 271 (335)
T 3n28_A 227 ---------------IVSGKLTGQ--------------------VLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGA 271 (335)
T ss_dssp ---------------EETTEEEEE--------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred ---------------eeCCeeeee--------------------ecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCH
Confidence 111100000 00 001234566666655443 446899999999
Q ss_pred CChhhhhhcceeEEecCcchhHHhhcCceeecchhh--HHHHHHHHhhHHHHHhhhhhhhhhhhh
Q 001023 889 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRN 951 (1185)
Q Consensus 889 NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~--l~~lll~~Gr~~~~ri~~~i~~~~~~n 951 (1185)
||++|++.|++||++.+.+. ....||+++...++ +..+ +......-+|++.++++.+.+|
T Consensus 272 nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 272 NDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp GGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred HHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 99999999999999966665 67789998854222 3333 3333344568888888887665
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.68 E-value=4.5e-08 Score=104.23 Aligned_cols=107 Identities=15% Similarity=0.141 Sum_probs=84.1
Q ss_pred EEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcc
Q 001023 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKK 803 (1185)
Q Consensus 724 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 803 (1185)
.+....+.|.+ +|+.|+++|+++.|+||+..+.+..++..+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34445555544 9999999999999999999999999999999832
Q ss_pred cccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCe
Q 001023 804 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDM 880 (1185)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~ 880 (1185)
++..+ +.|...++.+.+. ....
T Consensus 118 -----------------------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~ 142 (211)
T 3ij5_A 118 -----------------------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQ 142 (211)
T ss_dssp -----------------------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGG
T ss_pred -----------------------------------------------------hhccc--CChHHHHHHHHHHcCcCcce
Confidence 22222 5677887777654 3568
Q ss_pred EEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 881 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 881 vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
|+||||+.||++|++.|++++++.+.... +..+||+++..
T Consensus 143 ~~~vGDs~nDi~~~~~ag~~~a~~~~~~~-~~~~Ad~v~~~ 182 (211)
T 3ij5_A 143 VAYIGDDLIDWPVMAQVGLSVAVADAHPL-LLPKAHYVTRI 182 (211)
T ss_dssp EEEEECSGGGHHHHTTSSEEEECTTSCTT-TGGGSSEECSS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEeCCccHH-HHhhCCEEEeC
Confidence 99999999999999999999999543322 67789999866
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=4.5e-08 Score=101.53 Aligned_cols=128 Identities=13% Similarity=0.067 Sum_probs=91.1
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 813 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1185)
+.++..++|+.|+++|++++++||+....+..++..+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999988732
Q ss_pred ccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC---CeEEEEcCCcCC
Q 001023 814 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGDGAND 890 (1185)
Q Consensus 814 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g---~~vl~iGDG~ND 890 (1185)
++.. ...|...++.+.+..| ..|++|||+.||
T Consensus 77 -------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~D 111 (180)
T 1k1e_A 77 -------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVD 111 (180)
T ss_dssp -------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 2456777665544323 679999999999
Q ss_pred hhhhhhcceeEEec-CcchhHHhhcCceeecchh------hHHHHHHHHhhHHHHHhhhhhhhhh
Q 001023 891 VSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFR------FLVTLLLVHGHWNYQRMGYMILYNF 948 (1185)
Q Consensus 891 v~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f~------~l~~lll~~Gr~~~~ri~~~i~~~~ 948 (1185)
++|++.|++++++. +.+. +...||+++.+.. .+.+. +...|..++++...+.|.+
T Consensus 112 i~~~~~ag~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 112 LPAFAACGTSFAVADAPIY--VKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp HHHHHHSSEEEECTTSCHH--HHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred HHHHHHcCCeEEeCCccHH--HHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 99999999999984 3333 6678999987642 22233 2233444666665555443
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.7e-08 Score=104.56 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=76.5
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCc
Q 001023 741 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 820 (1185)
Q Consensus 741 ~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1185)
.|+.|+++|+++.|+||+....+..++..+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999842
Q ss_pred CcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhc
Q 001023 821 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 897 (1185)
Q Consensus 821 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 897 (1185)
++... +.|...++.+.+. ....|++|||+.||++|++.|
T Consensus 94 ------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~a 135 (195)
T 3n07_A 94 ------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKV 135 (195)
T ss_dssp ------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTS
T ss_pred ------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHC
Confidence 22222 4566766666543 346799999999999999999
Q ss_pred ceeEEecCcchhHHhhcCceeecc
Q 001023 898 DVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 898 dVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
++|+++..... .+...||+++..
T Consensus 136 g~~va~~na~~-~~~~~ad~v~~~ 158 (195)
T 3n07_A 136 ALRVCVADGHP-LLAQRANYVTHI 158 (195)
T ss_dssp SEEEECTTSCH-HHHHHCSEECSS
T ss_pred CCEEEECChHH-HHHHhCCEEEcC
Confidence 99999954332 277889999865
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.65 E-value=9.1e-08 Score=98.87 Aligned_cols=115 Identities=14% Similarity=0.161 Sum_probs=87.5
Q ss_pred EEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcc
Q 001023 724 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKK 803 (1185)
Q Consensus 724 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 803 (1185)
.+....+.|.+ +|+.|+++|+++.++||+....+..++..+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34444555444 899999999999999999999999999998872
Q ss_pred cccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCe
Q 001023 804 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDM 880 (1185)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~ 880 (1185)
+++. .+.|...++.+.+. ....
T Consensus 80 -----------------------------------------------------~~~~--~~~k~~~l~~~~~~~~~~~~~ 104 (176)
T 3mmz_A 80 -----------------------------------------------------VLHG--IDRKDLALKQWCEEQGIAPER 104 (176)
T ss_dssp -----------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGG
T ss_pred -----------------------------------------------------eEeC--CCChHHHHHHHHHHcCCCHHH
Confidence 1111 15677777766554 2467
Q ss_pred EEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc------hhhHHHHHHH
Q 001023 881 TLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ------FRFLVTLLLV 931 (1185)
Q Consensus 881 vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~------f~~l~~lll~ 931 (1185)
++++||+.||++|++.|++|+++. +.+. +...||+++.+ .+.+..+|+.
T Consensus 105 ~~~vGD~~nD~~~~~~ag~~v~~~~~~~~--~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 105 VLYVGNDVNDLPCFALVGWPVAVASAHDV--VRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp EEEEECSGGGHHHHHHSSEEEECTTCCHH--HHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred EEEEcCCHHHHHHHHHCCCeEECCChhHH--HHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 999999999999999999999994 4343 67789999987 5566666443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.64 E-value=7.9e-08 Score=98.35 Aligned_cols=106 Identities=12% Similarity=0.094 Sum_probs=81.2
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHH--HcCccCCCceEEEEeCCCHHHHHHHHHHHH
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY--SSKLLTSKMTQVIINSNSKESCRKSLEDAI 798 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~--~~gll~~~~~~~~i~~~~~~~~~~~~~~~~ 798 (1185)
+...++.+.++|.. +|+.|++.|+++.|+||+ +.+..++. .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 44567777777773 899999999999999999 77778887 34431
Q ss_pred HhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhC-
Q 001023 799 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT- 877 (1185)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~- 877 (1185)
++ ..+++|...++.+.+..
T Consensus 77 ----------------------------------------------------------~~--~g~~~K~~~l~~~~~~~g 96 (168)
T 3ewi_A 77 ----------------------------------------------------------TE--VSVSDKLATVDEWRKEMG 96 (168)
T ss_dssp ----------------------------------------------------------EE--CSCSCHHHHHHHHHHHTT
T ss_pred ----------------------------------------------------------EE--ECCCChHHHHHHHHHHcC
Confidence 11 11356888887776543
Q ss_pred --CCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc
Q 001023 878 --SDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 878 --g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~ 921 (1185)
...|+|+||+.||++|++.|++++++. +.+. +...||+++..
T Consensus 97 i~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~~--~k~~Ad~v~~~ 141 (168)
T 3ewi_A 97 LCWKEVAYLGNEVSDEECLKRVGLSAVPADACSG--AQKAVGYICKC 141 (168)
T ss_dssp CCGGGEEEECCSGGGHHHHHHSSEEEECTTCCHH--HHTTCSEECSS
T ss_pred cChHHEEEEeCCHhHHHHHHHCCCEEEeCChhHH--HHHhCCEEeCC
Confidence 357999999999999999999999994 4443 78899999865
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=1.5e-07 Score=95.66 Aligned_cols=109 Identities=22% Similarity=0.153 Sum_probs=83.6
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCc
Q 001023 741 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 820 (1185)
Q Consensus 741 ~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1185)
+++.|+++|+++.++||+....+..++..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998842
Q ss_pred CcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhc
Q 001023 821 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 897 (1185)
Q Consensus 821 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 897 (1185)
++... +.|...++.+.+. ....++||||+.||+.|.+.|
T Consensus 73 ------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 73 ------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp ------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred ------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 11111 4566666555443 346799999999999999999
Q ss_pred ceeEEe-cCcchhHHhhcCceeecc------hhhHHHHHHHHhhHH
Q 001023 898 DVGVGI-SGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWN 936 (1185)
Q Consensus 898 dVGIgi-sg~e~~qA~~aSD~~i~~------f~~l~~lll~~Gr~~ 936 (1185)
++++++ .+.+. +...||+++.+ ++.+...++ +|+|.
T Consensus 115 g~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 115 GIAGVPASAPFY--IRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp SEEECCTTSCHH--HHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred CCeEEcCChHHH--HHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 999988 44443 77889999987 555555545 66654
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2.8e-07 Score=102.36 Aligned_cols=198 Identities=20% Similarity=0.248 Sum_probs=107.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCc----------------eEEEEeCCCHHHHHHHHH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM----------------TQVIINSNSKESCRKSLE 795 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~----------------~~~~i~~~~~~~~~~~~~ 795 (1185)
..+-+.+.++|++|++.|+++.+.||.....+..+....|+..... +.+.-..-+.+...+.++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 3567889999999999999999999999999999999988731111 112222223344444444
Q ss_pred HHHHhhcccccCCCCCCccc-CC------------------------CCcCcCcEEEEEcCchhhhhccHHHHHHHHHHh
Q 001023 796 DAIAMSKKLKTVPGVSHNSE-RS------------------------SGAGVAQLALIIDGTSLVYILDSELDEQLFQLA 850 (1185)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~-~~------------------------~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 850 (1185)
.................... .. ......+ .++.+..... +.+.+.+....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k-i~~~~~~~~~----~~~~~~l~~~~ 175 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAK-CLIVGDAGKL----IPVESELCIRL 175 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSC-EEEESCHHHH----HHHHHHHHHHT
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceE-EEEeCCHHHH----HHHHHHHHHHh
Confidence 33222111000000000000 00 0000111 1222211110 11222222111
Q ss_pred -ccCCeeE----EEecCcc--cHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceee
Q 001023 851 -GTCSVVL----CCRVAPL--QKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAM 919 (1185)
Q Consensus 851 -~~~~~vi----~~r~sP~--qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i 919 (1185)
.....+. +....|. .|+..++.+.+.. ...|+++||+.||.+|++.|++||++.. .+. ++.+||++.
T Consensus 176 ~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~ 253 (279)
T 4dw8_A 176 QGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQEP--VKKAADYIT 253 (279)
T ss_dssp TTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCSEEC
T ss_pred cCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcHH--HHHhCCEEc
Confidence 1122211 2355565 8999998887653 3569999999999999999999999943 343 778899998
Q ss_pred cch------hhHHHHHHHHhhHH
Q 001023 920 GQF------RFLVTLLLVHGHWN 936 (1185)
Q Consensus 920 ~~f------~~l~~lll~~Gr~~ 936 (1185)
.+. +.+.+++..+||..
T Consensus 254 ~~~~e~Gv~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 254 LTNDEDGVAEAIERIFNVEGHHH 276 (279)
T ss_dssp CCGGGTHHHHHHHHHC-------
T ss_pred CCCCCcHHHHHHHHHHhcccccc
Confidence 652 33677777788754
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.53 E-value=4.9e-07 Score=101.07 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=55.8
Q ss_pred ccHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc------hhhHHHHHHHHhh
Q 001023 864 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGH 934 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~------f~~l~~lll~~Gr 934 (1185)
..|+..++.+.+..| ..|+++||+.||++|++.|++||+|...... .+.+||++..+ -+.+.+++...++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 579999988876533 5799999999999999999999999443322 77889999865 2347777777777
Q ss_pred HHHHHhhhh
Q 001023 935 WNYQRMGYM 943 (1185)
Q Consensus 935 ~~~~ri~~~ 943 (1185)
+-|.+-..+
T Consensus 280 ~~~~~~~~~ 288 (290)
T 3dnp_A 280 KGFLDKFHM 288 (290)
T ss_dssp C--------
T ss_pred ccHHhHhcc
Confidence 766554443
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.1e-07 Score=99.74 Aligned_cols=114 Identities=21% Similarity=0.213 Sum_probs=81.3
Q ss_pred HHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcC
Q 001023 742 IESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAG 821 (1185)
Q Consensus 742 I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1185)
|+.|+++|+++.++||+....+..++..+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999998842
Q ss_pred cCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcc
Q 001023 822 VAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMAD 898 (1185)
Q Consensus 822 ~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~Ad 898 (1185)
++... +.|...++.+.+. ....++||||+.||++|++.|+
T Consensus 88 -----------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag 130 (191)
T 3n1u_A 88 -----------------------------------YYKGQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVG 130 (191)
T ss_dssp -----------------------------------EECSC--SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred -----------------------------------ceeCC--CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence 11111 2233333333221 4567999999999999999999
Q ss_pred eeEEecCcchhHHhhcCceeecc------hhhHHHHHHHHhhHHHHHhh
Q 001023 899 VGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWNYQRMG 941 (1185)
Q Consensus 899 VGIgisg~e~~qA~~aSD~~i~~------f~~l~~lll~~Gr~~~~ri~ 941 (1185)
+++++.+... .+...||+++.+ .+.+..+ +...+..+..+.
T Consensus 131 ~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~ 177 (191)
T 3n1u_A 131 LGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAI 177 (191)
T ss_dssp EEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHH
T ss_pred CEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHH
Confidence 9999844332 267789999977 4445555 334444554433
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.50 E-value=6.2e-07 Score=99.60 Aligned_cols=203 Identities=15% Similarity=0.136 Sum_probs=99.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCC---------------ceEEEEeCCCHHHHHHHHHH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK---------------MTQVIINSNSKESCRKSLED 796 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~---------------~~~~~i~~~~~~~~~~~~~~ 796 (1185)
..+-+.+.++|++|++.|+++.+.||.....+..+...+|+..+. .+.+.-..-+.+..++.++.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 356788999999999999999999999999999999999875321 12222233344444444443
Q ss_pred HHHhhcccccCCCCCCcccC----------------------C-CCc-CcCcEEEEEcCch-hhhhccHHHHHHHHH-Hh
Q 001023 797 AIAMSKKLKTVPGVSHNSER----------------------S-SGA-GVAQLALIIDGTS-LVYILDSELDEQLFQ-LA 850 (1185)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~----------------------~-~~~-~~~~~~lvi~G~~-l~~~l~~~~~~~~~~-l~ 850 (1185)
..+......+.......... . ... ......+++.+.. ....+.+.+...+.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 33221111100000000000 0 000 0111112222211 000011111111111 11
Q ss_pred ccCCeeEEEecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc---
Q 001023 851 GTCSVVLCCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--- 921 (1185)
Q Consensus 851 ~~~~~vi~~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~--- 921 (1185)
.....--+....|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||+|. +.+. .+.+||++..+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE--VKEAAQAVTLTNAE 258 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH--HHHHCSCBC-----
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH--HHHhcceeccCCCc
Confidence 11111123344553 59999998877543 57999999999999999999999994 4444 77889999865
Q ss_pred ---hhhHHHHHHHHhhHH
Q 001023 922 ---FRFLVTLLLVHGHWN 936 (1185)
Q Consensus 922 ---f~~l~~lll~~Gr~~ 936 (1185)
-+.+.++++-+||..
T Consensus 259 ~Gv~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 259 NGVAAAIRKYALNEGHHH 276 (279)
T ss_dssp -CHHHHHC----------
T ss_pred cHHHHHHHHHhcccCccc
Confidence 233666667777653
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-07 Score=99.78 Aligned_cols=174 Identities=18% Similarity=0.113 Sum_probs=97.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCC----CceEE------EE-eCCCHHHHHHHHHHHHH
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQV------II-NSNSKESCRKSLEDAIA 799 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~----~~~~~------~i-~~~~~~~~~~~~~~~~~ 799 (1185)
..++.+.+.++|++|+++|++++++||+....+..++..+|+... +...+ .+ ..... +....+ +...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-~~~~~i-~~~~ 97 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-GTNKFL-EEMS 97 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-HHHHHH-HHHT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-HHHHHH-HHHH
Confidence 456788999999999999999999999999999999999887421 10111 11 11122 222222 2222
Q ss_pred hhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHHH
Q 001023 800 MSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALVK 874 (1185)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v---i~~r~sP--~qKa~iV~~lk 874 (1185)
.. ...... ..... ....+.. + +. ..+++....+.+.. ....+ -+..+.| ..|+..++.+.
T Consensus 98 ~~----~~~~~~-~~~~~---~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 98 KR----TSMRSI-LTNRW---REASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp TT----SSCBCC-GGGGG---CSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred HH----hcCCcc-ccccc---eecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 10 000000 00000 0001110 0 00 11111112222111 11111 1223446 68999999887
Q ss_pred hhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecch
Q 001023 875 TRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 875 ~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f 922 (1185)
+..| ..|+++|||.||.+|++.|++||++..... ..+.+||+++.+.
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 6533 579999999999999999999999943322 2667899998653
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.42 E-value=3.5e-07 Score=95.46 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=88.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+++.++++.|++.|++++++||+....+..+ ..+|+-.- ...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~--------------------------------- 123 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANR--------------------------------- 123 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEE---------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eee---------------------------------
Confidence 7899999999999999999999999998888777 77776321 000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
+...... .-.....|..|+..++.+ ....+++|||+.||+.
T Consensus 124 --------------~~~~~~~----------------------~~~~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~ 164 (201)
T 4ap9_A 124 --------------AIFEDGK----------------------FQGIRLRFRDKGEFLKRF---RDGFILAMGDGYADAK 164 (201)
T ss_dssp --------------EEEETTE----------------------EEEEECCSSCHHHHHGGG---TTSCEEEEECTTCCHH
T ss_pred --------------EEeeCCc----------------------eECCcCCccCHHHHHHhc---CcCcEEEEeCCHHHHH
Confidence 1111100 011455678899988887 3567899999999999
Q ss_pred hhhhcceeEEecCcchhHHhhcCceeecchhhHHHH
Q 001023 893 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 893 mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
|++.|++||++..... .||+++.++.-+..+
T Consensus 165 ~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 165 MFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp HHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 9999999999954442 799999987776655
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=9.1e-07 Score=92.32 Aligned_cols=109 Identities=16% Similarity=0.160 Sum_probs=80.6
Q ss_pred HHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCc
Q 001023 741 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 820 (1185)
Q Consensus 741 ~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1185)
+|+.|+++|+++.++||+....+..++...|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999888732
Q ss_pred CcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhc
Q 001023 821 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMA 897 (1185)
Q Consensus 821 ~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~A 897 (1185)
++.. .+.|...++.+.+.. ...+++|||+.||+.|.+.|
T Consensus 95 ------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~a 136 (188)
T 2r8e_A 95 ------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKV 136 (188)
T ss_dssp ------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTS
T ss_pred ------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 1111 234555555554322 36799999999999999999
Q ss_pred ceeEEec-CcchhHHhhcCceeecch-------hhHHHHHHHHhhH
Q 001023 898 DVGVGIS-GQEGRQAVMSSDFAMGQF-------RFLVTLLLVHGHW 935 (1185)
Q Consensus 898 dVGIgis-g~e~~qA~~aSD~~i~~f-------~~l~~lll~~Gr~ 935 (1185)
++++.+. +.+. +...||+++.+. ..+..+|-.+|+|
T Consensus 137 g~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 137 GLSVAVADAHPL--LIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp SEEEECTTSCTT--TGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred CCEEEecCcCHH--HHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 9999884 3333 556799999875 3355554556654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.31 E-value=9.2e-07 Score=93.71 Aligned_cols=129 Identities=19% Similarity=0.253 Sum_probs=89.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+..--...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~------------------------------- 122 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL------------------------------- 122 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE-------------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcccee-------------------------------
Confidence 4689999999999999999999999999999988888888742100000
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEec-CcccHHHHHHHHHhh---CCCeEEEEcCC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV-APLQKAGIVALVKTR---TSDMTLAIGDG 887 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~-sP~qKa~iV~~lk~~---~g~~vl~iGDG 887 (1185)
..+...+. ..+.+.+ .++.|...++.+.+. ....+++|||+
T Consensus 123 ----------------~~~~~~~~-------------------~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs 167 (217)
T 3m1y_A 123 ----------------IVENDALN-------------------GLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDG 167 (217)
T ss_dssp ----------------EEETTEEE-------------------EEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECS
T ss_pred ----------------EEeCCEEE-------------------eeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCC
Confidence 00000000 0011111 245677777666554 34679999999
Q ss_pred cCChhhhhhcceeEEecCcchhHHhhcCceeecchhh--HHHH
Q 001023 888 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTL 928 (1185)
Q Consensus 888 ~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~--l~~l 928 (1185)
.||+.|++.|++++++.+.+. ....||+++.+.++ +..+
T Consensus 168 ~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~ 208 (217)
T 3m1y_A 168 ANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPL 208 (217)
T ss_dssp GGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC
T ss_pred HHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHH
Confidence 999999999999999966555 56789999976444 4444
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=1.8e-06 Score=90.77 Aligned_cols=126 Identities=22% Similarity=0.257 Sum_probs=83.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+++.++++.|++.|+++.++||+....+..+...+|+.. .+ .
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~----~~--~---------------------------- 120 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY----AF--A---------------------------- 120 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE----EE--E----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe----EE--E----------------------------
Confidence 3577899999999999999999999998888777777766521 00 0
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhh---CCCeEEEEcCC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTR---TSDMTLAIGDG 887 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r-~sP~qKa~iV~~lk~~---~g~~vl~iGDG 887 (1185)
..+.+....+. .. +.+. +.+..|...+..+.+. ....++++||+
T Consensus 121 -------------~~~~~~~~~~~------------------~~-~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~ 168 (211)
T 1l7m_A 121 -------------NRLIVKDGKLT------------------GD-VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDG 168 (211)
T ss_dssp -------------EEEEEETTEEE------------------EE-EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred -------------eeeEEECCEEc------------------CC-cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecC
Confidence 00000000000 00 1111 1245777666655443 33569999999
Q ss_pred cCChhhhhhcceeEEecCcchhHHhhcCceeecc--hhhH
Q 001023 888 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFL 925 (1185)
Q Consensus 888 ~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~--f~~l 925 (1185)
.||+.|++.|++++++.+.+. ....||+++.+ +.-+
T Consensus 169 ~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 169 ANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREI 206 (211)
T ss_dssp GGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGG
T ss_pred hhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHH
Confidence 999999999999999975443 45679999876 4443
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.20 E-value=2.8e-06 Score=100.28 Aligned_cols=117 Identities=26% Similarity=0.363 Sum_probs=88.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.++++.|++.|+++.++||.....+..++..+|+..--...+
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l-------------------------------- 303 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANEL-------------------------------- 303 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECE--------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeE--------------------------------
Confidence 799999999999999999999999999999999999999832100000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEec-----CcccHHHHHHHHHhh---CCCeEEEE
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRV-----APLQKAGIVALVKTR---TSDMTLAI 884 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~-----sP~qKa~iV~~lk~~---~g~~vl~i 884 (1185)
-+.+|. +.++. .++.|..+++.+.+. ....++||
T Consensus 304 --------------~~~dg~------------------------~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 304 --------------EIVDGT------------------------LTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp --------------EEETTE------------------------EEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred --------------EEeCCE------------------------EEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 011110 22221 256778777776554 33579999
Q ss_pred cCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 885 GDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 885 GDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
|||.||+.|++.|++|+++.+.+. ....||+++..
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~ 380 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSH 380 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECS
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEcc
Confidence 999999999999999999966554 66789999865
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=3.3e-06 Score=95.63 Aligned_cols=120 Identities=18% Similarity=0.234 Sum_probs=83.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.++++.|+++|+++.++||.....+..+...+|+..--...
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~--------------------------------- 225 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNT--------------------------------- 225 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEC---------------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEE---------------------------------
Confidence 48999999999999999999999999999999999999984210000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE-ecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC-RVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~-r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
+.+++..+.. .+.+ -..++.|..+++.+.+. ....++||||+.
T Consensus 226 --------------l~~~dg~~tg-------------------~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~ 272 (317)
T 4eze_A 226 --------------VEIRDNVLTD-------------------NITLPIMNAANKKQTLVDLAARLNIATENIIACGDGA 272 (317)
T ss_dssp --------------EEEETTEEEE-------------------EECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred --------------EEeeCCeeee-------------------eEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCH
Confidence 0011100000 0000 01235666666655443 346799999999
Q ss_pred CChhhhhhcceeEEecCcchhHHhhcCceeec
Q 001023 889 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 920 (1185)
Q Consensus 889 NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~ 920 (1185)
||+.|.+.|++|+++.+.+. ....+|.++.
T Consensus 273 ~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 273 NDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp GGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred HHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 99999999999999965554 5567887764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.1e-06 Score=88.30 Aligned_cols=134 Identities=17% Similarity=0.229 Sum_probs=87.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
.+.+|+.++++.|++.|+++.++||.....+..+....|+.... .+.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~------------------------------- 128 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFA------------------------------- 128 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEE-------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEE-------------------------------
Confidence 38899999999999999999999999999999999888884211 000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
..++.++.... ..+.....+|..|...+..........++|+||+.||+.
T Consensus 129 ------------~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~ 178 (219)
T 3kd3_A 129 ------------VETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQ 178 (219)
T ss_dssp ------------EEEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHH
T ss_pred ------------eeeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHH
Confidence 00111110000 001222334566666665542225678999999999999
Q ss_pred hhhh--cceeEEec-CcchhHHhhcCceeecchhhHHHHH
Q 001023 893 MIQM--ADVGVGIS-GQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 893 mL~~--AdVGIgis-g~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
|+++ +.+||+.. +.........||+++.++.-+..+|
T Consensus 179 ~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 179 LYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 9965 33555552 2222225567999999988877664
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.18 E-value=5.6e-06 Score=92.21 Aligned_cols=182 Identities=10% Similarity=0.073 Sum_probs=102.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC----CC-------ceEEEEeCCCHHHHHHHHHHHHHh-
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SK-------MTQVIINSNSKESCRKSLEDAIAM- 800 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~----~~-------~~~~~i~~~~~~~~~~~~~~~~~~- 800 (1185)
.+-+.+.++|++|++.|+++++.||.....+..+...+++.. .+ .+.+.-..-+.+..++.++...+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 577899999999999999999999999999998887776421 11 122222222444444444433322
Q ss_pred -hcccccCCCC--------------------------CCcccCCCCcCcCcEEEEE-cCchhhhhccHHHHHHHHHHhcc
Q 001023 801 -SKKLKTVPGV--------------------------SHNSERSSGAGVAQLALII-DGTSLVYILDSELDEQLFQLAGT 852 (1185)
Q Consensus 801 -~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~lvi-~G~~l~~~l~~~~~~~~~~l~~~ 852 (1185)
.....+.... ..+..- ......+. .+. +........ +.+.+.+.. .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~~~~ki-~i~~~~~~~~~~~-~~l~~~~~~---~ 192 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRL-DRNDIIKF-TVFHPDKCEELCT-PVFIPAWNK---K 192 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGC-CCSCCCEE-EEECSSCHHHHHT-TTHHHHHTT---T
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHc-CccCceEE-EEEcChHHHHHHH-HHHHHHhcC---C
Confidence 0000000000 000000 00011122 222 233222211 122233321 1
Q ss_pred CCee----EEEecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceeecch
Q 001023 853 CSVV----LCCRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 853 ~~~v----i~~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~f 922 (1185)
...+ .+....|. .|+..++.+.+..| .-|+++||+.||.+|++.|++||+|.. .+. .+.+||++..+.
T Consensus 193 ~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~--~k~~A~~v~~s~ 270 (283)
T 3dao_A 193 AHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE--VIAAAKHTCAPY 270 (283)
T ss_dssp EEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH--HHHHSSEEECCG
T ss_pred EEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH--HHHhcCeECCCC
Confidence 1111 12344453 69999998877644 569999999999999999999999944 443 778999998653
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.18 E-value=8.4e-06 Score=90.86 Aligned_cols=184 Identities=16% Similarity=0.125 Sum_probs=96.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC------------CCceEEEEeCCCHHHHHHHHHHHHH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT------------SKMTQVIINSNSKESCRKSLEDAIA 799 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~------------~~~~~~~i~~~~~~~~~~~~~~~~~ 799 (1185)
..+-+.+.++|++|++.|+++.+.||.....+..+...+|+-. .+.+.+.-..-+.+...+.++....
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 4577789999999999999999999999999999999888732 1112222222233333333221111
Q ss_pred hhcc-c-ccCCC-------CCCc---ccC---------CCC-cCcC-cEEEEEcCch-hhhhccHHHHHHHHH-HhccCC
Q 001023 800 MSKK-L-KTVPG-------VSHN---SER---------SSG-AGVA-QLALIIDGTS-LVYILDSELDEQLFQ-LAGTCS 854 (1185)
Q Consensus 800 ~~~~-~-~~~~~-------~~~~---~~~---------~~~-~~~~-~~~lvi~G~~-l~~~l~~~~~~~~~~-l~~~~~ 854 (1185)
.... . ..... .... ... ... .... ...++.+++. -...+.+.+.+.+.. +.....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 0000 0 00000 0000 000 000 0011 1122222221 000111122222211 000000
Q ss_pred eeEEEecCc--ccHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCce
Q 001023 855 VVLCCRVAP--LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDF 917 (1185)
Q Consensus 855 ~vi~~r~sP--~qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~ 917 (1185)
...+..+.| ..|+.-++.+.+..| ..|+++||+.||.+|++.|++||+|.. .+. .+.+||+
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~--vk~~A~~ 263 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR--LKDLHPE 263 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCTT
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH--HHHhCCC
Confidence 011234444 469999998877544 579999999999999999999999944 443 7788885
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.15 E-value=5.3e-06 Score=94.81 Aligned_cols=76 Identities=18% Similarity=0.248 Sum_probs=56.6
Q ss_pred cccHHHHHHHHHhh-CCCeEEEEcCCcCChhhhhhc----ceeEEecCcchhHHhhcCceeecc--h----hhHHHHHHH
Q 001023 863 PLQKAGIVALVKTR-TSDMTLAIGDGANDVSMIQMA----DVGVGISGQEGRQAVMSSDFAMGQ--F----RFLVTLLLV 931 (1185)
Q Consensus 863 P~qKa~iV~~lk~~-~g~~vl~iGDG~NDv~mL~~A----dVGIgisg~e~~qA~~aSD~~i~~--f----~~l~~lll~ 931 (1185)
+.+|+..++.++.. ..++|+++|||.||++|++.| ++||++.+.+. ++.+||+++.+ . ..+.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vamna~~~--lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEecCCHH--HHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799998877541 125599999999999999999 99999933333 77889999865 2 335555 67
Q ss_pred HhhHHHHHhhh
Q 001023 932 HGHWNYQRMGY 942 (1185)
Q Consensus 932 ~Gr~~~~ri~~ 942 (1185)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888777 5444
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-05 Score=80.71 Aligned_cols=106 Identities=14% Similarity=0.224 Sum_probs=77.1
Q ss_pred ecCChhHHHHHHHHHHc-CCEEEEecCCeEEEEecCceeeeEE--EEEeecCCCCCceEEEEEecCCCcEEEEEcCchhH
Q 001023 570 QGESPDEQALVYAAAAY-GFMLIERTSGHIVIDIQGQRQSRFN--VLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTS 646 (1185)
Q Consensus 570 ~~~sp~e~alv~~a~~~-g~~~~~r~~~~~~i~~~g~~~~~~~--il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~ 646 (1185)
.++||...|++++|++. |..... .+ .....+|++.-++..|.+ +| .-+.+|++..
T Consensus 48 ~SeHPla~AIv~~A~~~~~l~~~~-----------------~~~~~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~ 105 (156)
T 1svj_A 48 ADETPEGRSIVILAKQRFNLRERD-----------------VQSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDA 105 (156)
T ss_dssp SCCSHHHHHHHHHHHHHTTCCCCC-----------------HHHHTCEEEEEETTTTEEEEEE---TT--EEEEEEEHHH
T ss_pred cCCCHHHHHHHHHHHHhcCCCccc-----------------ccccccceeeccccCCCCeEEE---CC--EEEEEeCcHH
Confidence 35799999999999986 653211 00 011357887777677754 45 3466899988
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEE
Q 001023 647 MFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILG 726 (1185)
Q Consensus 647 i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG 726 (1185)
|...+... +-.....+.+.+++++.+|.+++++|. |..++|
T Consensus 106 i~~l~~~~-gi~~~~~~~~~~~~la~~G~T~v~VA~--------------------------------------d~~l~G 146 (156)
T 1svj_A 106 IRRHVEAN-GGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVLG 146 (156)
T ss_dssp HHHHHHHH-TCCCCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEEEE
T ss_pred HHHHHHHc-CCCCcHHHHHHHHHHHhCCCCEEEEEE--------------------------------------CCEEEE
Confidence 87777654 323444577888999999999999996 678999
Q ss_pred eeecccccCC
Q 001023 727 ASGIEDKLQQ 736 (1185)
Q Consensus 727 ~~~ieD~lr~ 736 (1185)
++++.|++|+
T Consensus 147 vIalaD~iK~ 156 (156)
T 1svj_A 147 VIALKDIVKG 156 (156)
T ss_dssp EEEEEECCCC
T ss_pred EEEEecCCCC
Confidence 9999999996
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.07 E-value=3.7e-05 Score=80.71 Aligned_cols=124 Identities=21% Similarity=0.139 Sum_probs=89.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+.++++.|++. +++.++|+...+.+..+...+|+..--...
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~--------------------------------- 114 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHK--------------------------------- 114 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecce---------------------------------
Confidence 5789999999999999 999999999999999999998874200000
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE--ecCcccHHHHHHHHHhhCCCeEEEEcCCcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC--RVAPLQKAGIVALVKTRTSDMTLAIGDGAND 890 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~--r~sP~qKa~iV~~lk~~~g~~vl~iGDG~ND 890 (1185)
++. +.... ... .-.|..|...++.+.. .+..++||||+.||
T Consensus 115 --------------~~~-~~~~~---------------------~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~~~D 157 (206)
T 1rku_A 115 --------------LEI-DDSDR---------------------VVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYND 157 (206)
T ss_dssp --------------EEE-CTTSC---------------------EEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTT
T ss_pred --------------eEE-cCCce---------------------EEeeecCCCchHHHHHHHHHh-cCCEEEEEeCChhh
Confidence 111 10000 111 2467889999998877 67889999999999
Q ss_pred hhhhhhcceeEEecCcchhHHhhcCcee-ecchhhHHHH
Q 001023 891 VSMIQMADVGVGISGQEGRQAVMSSDFA-MGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdVGIgisg~e~~qA~~aSD~~-i~~f~~l~~l 928 (1185)
+.|.+.|++++.+.+.+.. ...+.+++ +.++.-+..+
T Consensus 158 i~~a~~aG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 158 TTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp HHHHHHSSEEEEESCCHHH-HHHCTTSCEECSHHHHHHH
T ss_pred HHHHHhcCccEEECCcHHH-HHHHhhhccccchHHHHHH
Confidence 9999999999988544432 22345665 6666666554
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.06 E-value=6.4e-05 Score=82.21 Aligned_cols=179 Identities=17% Similarity=0.163 Sum_probs=98.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC---CCc-------eEEEEeCCCHHHHHHHHHHHHHhh
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT---SKM-------TQVIINSNSKESCRKSLEDAIAMS 801 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~---~~~-------~~~~i~~~~~~~~~~~~~~~~~~~ 801 (1185)
..+.+.+.++|++|++.|+++.+.||.....+..+..++++.. .+. +.+.-..-+.+...+.++...+..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 3567788899999999999999999999999988888876521 111 111222234444444444333221
Q ss_pred cccccCCCCC-Cccc-------------C--CC-C-----cCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEE
Q 001023 802 KKLKTVPGVS-HNSE-------------R--SS-G-----AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 859 (1185)
Q Consensus 802 ~~~~~~~~~~-~~~~-------------~--~~-~-----~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~ 859 (1185)
.......... .... . .. . .....+.+++.+.. +....+.... ..+-+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~~---~~~~~~ 168 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRA-------EEEEPYVRNY---PEFRFV 168 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH-------HHHHHHHHHC---TTEEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCH-------HHHHHHHHhC---CCeEEE
Confidence 1100000000 0000 0 00 0 00112223333321 1111111111 111122
Q ss_pred ecCc---------ccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecch
Q 001023 860 RVAP---------LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 860 r~sP---------~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f 922 (1185)
+..| ..|+.-++.+.+. ....|+++|||.||.+|++.|++||+|. +.+. .+..||++..+.
T Consensus 169 ~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~~~--~k~~A~~v~~~~ 242 (258)
T 2pq0_A 169 RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAHEE--VKRVADFVTKPV 242 (258)
T ss_dssp EEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCCHH--HHHTCSEEECCG
T ss_pred EeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCcHH--HHHhCCEEeCCC
Confidence 2222 2689888888765 3357999999999999999999999994 3333 678899998653
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.2e-05 Score=90.45 Aligned_cols=56 Identities=21% Similarity=0.408 Sum_probs=46.6
Q ss_pred ccHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceeecc
Q 001023 864 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~ 921 (1185)
..|+.-++.+.+..| ..|+++||+.||+.|++.|++||+|.. .+. .+.+||++..+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~--~k~~Ad~v~~~ 286 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN--VKAAANYQAKS 286 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH--HHHHCSEECCC
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH--HHHhccEEcCC
Confidence 579999988876544 569999999999999999999999944 443 77889999876
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.04 E-value=6.6e-06 Score=87.86 Aligned_cols=130 Identities=18% Similarity=0.236 Sum_probs=87.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.||+.++++.|+++|++++++||.....+..+...+|+...+ .+..
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~----------------------------- 133 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFAN----------------------------- 133 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEE-----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEee-----------------------------
Confidence 368999999999999999999999999999999999999984210 0000
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEe-c-----CcccHHHHHHHHHhhCC-CeEEEE
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-V-----APLQKAGIVALVKTRTS-DMTLAI 884 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r-~-----sP~qKa~iV~~lk~~~g-~~vl~i 884 (1185)
.+..+. ..++.+. . .+..|..+++.+.+..| ..+++|
T Consensus 134 --------------~~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~v 177 (225)
T 1nnl_A 134 --------------RLKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMI 177 (225)
T ss_dssp --------------CEEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred --------------eEEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEE
Confidence 000000 0001121 1 12467777766554333 679999
Q ss_pred cCCcCChhhhhhcceeEEecCcc-hhHHhhcCceeecchhhHHHH
Q 001023 885 GDGANDVSMIQMADVGVGISGQE-GRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 885 GDG~NDv~mL~~AdVGIgisg~e-~~qA~~aSD~~i~~f~~l~~l 928 (1185)
||+.||+.|.++|+++|++.... .......+|+++.++.-+..+
T Consensus 178 GDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 178 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred eCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 99999999999999988884321 112334689999887765433
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=7.9e-06 Score=85.86 Aligned_cols=129 Identities=18% Similarity=0.170 Sum_probs=86.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.++++.|++.|+++.++|+...+.+..+....|+..--..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 115 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--------------------------------- 115 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG---------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc---------------------------------
Confidence 36779999999999999999999999999888888888887421000
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
..++.+.. . ..+-|...++.+.+. ....+++|||+.
T Consensus 116 --------------~~i~~~~~-------------------------~--~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 116 --------------ADVLGRDE-------------------------A--PPKPHPGGLLKLAEAWDVSPSRMVMVGDYR 154 (205)
T ss_dssp --------------GGEECTTT-------------------------S--CCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred --------------ceEEeCCC-------------------------C--CCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 00011000 0 011122233333222 346799999999
Q ss_pred CChhhhhhcce-eEEec-CcchhHHhhcCceeecchhhHHHHHHHHhhHH
Q 001023 889 NDVSMIQMADV-GVGIS-GQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWN 936 (1185)
Q Consensus 889 NDv~mL~~AdV-GIgis-g~e~~qA~~aSD~~i~~f~~l~~lll~~Gr~~ 936 (1185)
||+.|.+.|++ +|++. +.+. ....||+++.++.-|..++=.+++..
T Consensus 155 ~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~~~~~~~~~~ 202 (205)
T 3m9l_A 155 FDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRDLLSAEGHHH 202 (205)
T ss_dssp HHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHHHHHhccccc
Confidence 99999999999 99994 4333 45579999999888877754454443
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.02 E-value=3.3e-05 Score=85.06 Aligned_cols=59 Identities=24% Similarity=0.345 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchh
Q 001023 864 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 923 (1185)
Q Consensus 864 ~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~ 923 (1185)
..|+..++.+.+. ....|+++||+.||.+|++.|++||++..... +.+.+||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQ-QLKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCH-HHHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccH-HHHHhhhheeCCCc
Confidence 4699888887665 34679999999999999999999999943332 27788999987643
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.00 E-value=1e-05 Score=86.90 Aligned_cols=122 Identities=25% Similarity=0.284 Sum_probs=82.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
.++.+|+.+.++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 148 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT---------------------------------- 148 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS----------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee----------------------------------
Confidence 4678999999999999999999999999988888888888742110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
.++.+.... . .+-|...++.+.+. ....|++|||+.
T Consensus 149 ---------------~~~~~~~~~------------------------~--~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 149 ---------------VIAGDDSVE------------------------R--GKPHPDMALHVARGLGIPPERCVVIGDGV 187 (237)
T ss_dssp ---------------EEECTTTSS------------------------S--CTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred ---------------eEEeCCCCC------------------------C--CCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 111111100 0 11222333322222 446799999999
Q ss_pred CChhhhhhcce---eEEecCcchhHHh-hcCceeecchhhHHHH
Q 001023 889 NDVSMIQMADV---GVGISGQEGRQAV-MSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 889 NDv~mL~~AdV---GIgisg~e~~qA~-~aSD~~i~~f~~l~~l 928 (1185)
||+.|.++|++ ||+.......... ..+|+++.++.-|..+
T Consensus 188 ~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 188 PDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp HHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 99999999999 5554322211122 3699999998888776
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.97 E-value=4e-05 Score=85.27 Aligned_cols=61 Identities=25% Similarity=0.342 Sum_probs=48.0
Q ss_pred EecCcc--cHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceeecc
Q 001023 859 CRVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~ 921 (1185)
..+.|. .|+..++.+.+. ....|+++||+.||.+|++.|++||++.. .+. .+..||+++.+
T Consensus 190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~--~~~~a~~v~~~ 256 (282)
T 1rkq_A 190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPS--VKEVANFVTKS 256 (282)
T ss_dssp EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHCSEECCC
T ss_pred EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcHH--HHhhCCEEecC
Confidence 345555 899999988764 23579999999999999999999999943 333 55679998865
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.3e-05 Score=79.21 Aligned_cols=104 Identities=14% Similarity=0.136 Sum_probs=76.3
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 813 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1185)
+.+++.++|+.|+++|+++.++||.....+..+....|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 45667899999999999999999999999999998888731
Q ss_pred ccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhh--CCCeEEEEcCCcCC
Q 001023 814 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDGAND 890 (1185)
Q Consensus 814 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~l-k~~--~g~~vl~iGDG~ND 890 (1185)
.+.. ++.|...++.+ ++. ....+++|||+.||
T Consensus 78 -------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~D 112 (162)
T 2p9j_A 78 -------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVD 112 (162)
T ss_dssp -------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred -------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 12334443333 221 34579999999999
Q ss_pred hhhhhhcceeEEe-cCcchhHHhhcCceeecchh
Q 001023 891 VSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQFR 923 (1185)
Q Consensus 891 v~mL~~AdVGIgi-sg~e~~qA~~aSD~~i~~f~ 923 (1185)
+.|.+.|++++.+ .+.+. ....||+++.+..
T Consensus 113 i~~a~~ag~~~~~~~~~~~--~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 113 IEVMKKVGFPVAVRNAVEE--VRKVAVYITQRNG 144 (162)
T ss_dssp HHHHHHSSEEEECTTSCHH--HHHHCSEECSSCS
T ss_pred HHHHHHCCCeEEecCccHH--HHhhCCEEecCCC
Confidence 9999999999888 34443 5567999987743
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.94 E-value=2.2e-05 Score=84.03 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=76.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
.+.+|+.++++.|++.|+++.++||.....+..++..+|+.. .+. ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~----~~~--~~--------------------------- 138 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH----LIA--TD--------------------------- 138 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE----EEE--CE---------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----EEE--cc---------------------------
Confidence 589999999999999999999999999999999999999841 100 00
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEE-EecCcccHHHHHHHHHhhCC------CeEEEEc
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC-CRVAPLQKAGIVALVKTRTS------DMTLAIG 885 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~-~r~sP~qKa~iV~~lk~~~g------~~vl~iG 885 (1185)
....+|. +. .-+. -...+..|...++.+.+..| ..++++|
T Consensus 139 -------------~~~~~~~-~~-------------------g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vG 185 (232)
T 3fvv_A 139 -------------PEYRDGR-YT-------------------GRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYS 185 (232)
T ss_dssp -------------EEEETTE-EE-------------------EEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEE
T ss_pred -------------eEEECCE-Ee-------------------eeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEe
Confidence 0001110 00 0000 01124567777765544344 5799999
Q ss_pred CCcCChhhhhhcceeEEecCcch
Q 001023 886 DGANDVSMIQMADVGVGISGQEG 908 (1185)
Q Consensus 886 DG~NDv~mL~~AdVGIgisg~e~ 908 (1185)
|+.||++|++.|++++++...+.
T Consensus 186 Ds~~D~~~~~~ag~~~~~~~~~~ 208 (232)
T 3fvv_A 186 DSVNDVPLLEAVTRPIAANPSPG 208 (232)
T ss_dssp CCGGGHHHHHHSSEEEEESCCHH
T ss_pred CCHhhHHHHHhCCCeEEECcCHH
Confidence 99999999999999999965443
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.93 E-value=8.1e-05 Score=81.77 Aligned_cols=58 Identities=26% Similarity=0.408 Sum_probs=47.0
Q ss_pred ccHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecch
Q 001023 864 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f 922 (1185)
..|+.-++.+.+..| ..|+++||+.||.+|++.|++||+|..... .++.+||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASE-KVQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcH-HHHHhcCEeeCCC
Confidence 479999988877543 569999999999999999999999944332 2778899998763
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.92 E-value=2.9e-05 Score=82.50 Aligned_cols=121 Identities=17% Similarity=0.153 Sum_probs=85.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.+.++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 4678999999999999999999999998888888888887742110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecC--cccHHHHHHHHHhh---CCCeEEEEcC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA--PLQKAGIVALVKTR---TSDMTLAIGD 886 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~s--P~qKa~iV~~lk~~---~g~~vl~iGD 886 (1185)
.++++... ++-|...++.+.+. ....|++|||
T Consensus 131 -------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD 167 (226)
T 3mc1_A 131 -------------------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGD 167 (226)
T ss_dssp -------------------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEES
T ss_pred -------------------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECC
Confidence 11222221 23455555544433 3357999999
Q ss_pred CcCChhhhhhcce---eEEecC-cchhHHhhcCceeecchhhHHHHH
Q 001023 887 GANDVSMIQMADV---GVGISG-QEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 887 G~NDv~mL~~AdV---GIgisg-~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
+.||+.|.+.|++ +|.... .........+|+++.++.-|..++
T Consensus 168 ~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 168 REYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp SHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 9999999999999 444321 222112468999999988888774
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=2.6e-05 Score=82.45 Aligned_cols=119 Identities=13% Similarity=0.096 Sum_probs=78.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
.+.+++.+.++.|++.|++++++|+...+.+..+....|+...-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 139 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA---------------------------------- 139 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcE----------------------------------
Confidence 4579999999999999999999999988877777776666321100
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhh---CCCeEEEEcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTR---TSDMTLAIGDG 887 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qK--a~iV~~lk~~---~g~~vl~iGDG 887 (1185)
+ +++...+..| ...++.+.+. ....+++|||+
T Consensus 140 ---------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~ 176 (226)
T 1te2_A 140 ---------------L----------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDS 176 (226)
T ss_dssp ---------------E----------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESS
T ss_pred ---------------E----------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCC
Confidence 1 1111111111 2333322221 44679999999
Q ss_pred cCChhhhhhcceeEEecCcch---hHHhhcCceeecchhhHHHH
Q 001023 888 ANDVSMIQMADVGVGISGQEG---RQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 888 ~NDv~mL~~AdVGIgisg~e~---~qA~~aSD~~i~~f~~l~~l 928 (1185)
.||+.|++.|++++.+-...+ ......||+++.++.-+..-
T Consensus 177 ~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 177 VNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 999999999999987721111 11356799999887665433
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.89 E-value=1e-05 Score=93.84 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=38.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
.++.|++.+.|+.|+++|++|||+||...+.+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999987
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=2.4e-05 Score=84.79 Aligned_cols=42 Identities=24% Similarity=0.258 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.++.+|+.++++.|++.|++++++|+...+.+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999888898888874
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.79 E-value=3.8e-05 Score=81.93 Aligned_cols=125 Identities=20% Similarity=0.224 Sum_probs=81.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~---------------------------------- 127 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFD---------------------------------- 127 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHhe----------------------------------
Confidence 4678999999999999999999999998888888888888742100
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
.++.+.... ...-.|.--..+.+.+.- ....+++|||+.||+
T Consensus 128 ---------------~i~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di 169 (222)
T 2nyv_A 128 ---------------LIVGGDTFG----------------------EKKPSPTPVLKTLEILGE-EPEKALIVGDTDADI 169 (222)
T ss_dssp ---------------EEECTTSSC----------------------TTCCTTHHHHHHHHHHTC-CGGGEEEEESSHHHH
T ss_pred ---------------EEEecCcCC----------------------CCCCChHHHHHHHHHhCC-CchhEEEECCCHHHH
Confidence 111111000 000011111222232222 446799999999999
Q ss_pred hhhhhccee-EEec-CcchhHHhhcCceeecchhhHHHHH
Q 001023 892 SMIQMADVG-VGIS-GQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 892 ~mL~~AdVG-Igis-g~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
.|.+.|+++ |++. |....+. ..+|+++.++.-+..++
T Consensus 170 ~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 170 EAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 999999998 6773 3221112 56899998887776653
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.77 E-value=3.1e-05 Score=82.46 Aligned_cols=123 Identities=20% Similarity=0.146 Sum_probs=81.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.+.++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 135 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI---------------------------------- 135 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh----------------------------------
Confidence 4578999999999999999999999999988888888877743110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
.++.+.... .++-|...++.+.+. ....+++|||+.
T Consensus 136 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 136 ---------------NIVTRDDVS--------------------------YGKPDPDLFLAAAKKIGAPIDECLVIGDAI 174 (233)
T ss_dssp ---------------CEECGGGSS--------------------------CCTTSTHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ---------------eeeccccCC--------------------------CCCCChHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 011111000 012223333333322 335799999999
Q ss_pred CChhhhhhcce-eEEe-cC-cchhHHhh-cCceeecchhhHHHHH
Q 001023 889 NDVSMIQMADV-GVGI-SG-QEGRQAVM-SSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 889 NDv~mL~~AdV-GIgi-sg-~e~~qA~~-aSD~~i~~f~~l~~ll 929 (1185)
||+.|.++|++ +|++ .| ........ .+|+++.++.-+..+|
T Consensus 175 ~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 175 WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 99999999999 4455 23 22211233 3999999988887763
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.74 E-value=4.9e-05 Score=82.35 Aligned_cols=56 Identities=13% Similarity=0.238 Sum_probs=47.0
Q ss_pred EecCcc--cHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhc--ceeEEecCcchhHHhhcCceeecc
Q 001023 859 CRVAPL--QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMA--DVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~A--dVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
..+.|. .|+.-++.+.+..| |+++|||.||.+||+.| ++||+|... ...||+++.+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 345565 89999999988666 99999999999999999 999999553 4578998866
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.73 E-value=6.1e-05 Score=80.96 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=84.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.++++.|++.|++++++|+.....+..+....|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 4678999999999999999999999998888888888888743110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecC--cccHHHHHHHHHhh---C-CCeEEEEc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA--PLQKAGIVALVKTR---T-SDMTLAIG 885 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~s--P~qKa~iV~~lk~~---~-g~~vl~iG 885 (1185)
.++++... ++-|...++.+.+. . ...+++||
T Consensus 155 -------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vG 191 (240)
T 3sd7_A 155 -------------------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVG 191 (240)
T ss_dssp -------------------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred -------------------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEC
Confidence 11222211 23355555544433 4 56799999
Q ss_pred CCcCChhhhhhccee-EEec-CcchhH--HhhcCceeecchhhHHHHH
Q 001023 886 DGANDVSMIQMADVG-VGIS-GQEGRQ--AVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 886 DG~NDv~mL~~AdVG-Igis-g~e~~q--A~~aSD~~i~~f~~l~~ll 929 (1185)
|+.||+.|.+.|++. |++. |..... ....+|+++.++.-+..+|
T Consensus 192 D~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 192 DRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999999999983 3442 322211 2367999999988877664
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00043 Score=77.06 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=45.5
Q ss_pred cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchh
Q 001023 865 QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 923 (1185)
Q Consensus 865 qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~ 923 (1185)
.|+..++.+.+..| ..++++||+.||.+|++.|++||++..... ..+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 79998888876533 479999999999999999999999943322 25667999886543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.70 E-value=5.8e-05 Score=78.35 Aligned_cols=117 Identities=16% Similarity=0.160 Sum_probs=75.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-.+.+++.++++.|++.|++++++|++...... .....|+...
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~------------------------------------ 126 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY------------------------------------ 126 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG------------------------------------
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh------------------------------------
Confidence 356899999999999999999999999887766 6665555210
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhhCCCeEEEEcCCcC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGAN 889 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~--qKa~iV~~lk~~~g~~vl~iGDG~N 889 (1185)
+..++.+.... ...|. --..+.+.+.- ....+++|||+.|
T Consensus 127 -------------f~~~~~~~~~~------------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~~n 168 (207)
T 2go7_A 127 -------------FTEILTSQSGF------------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDRTL 168 (207)
T ss_dssp -------------EEEEECGGGCC------------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESSHH
T ss_pred -------------eeeEEecCcCC------------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCCHH
Confidence 11111111000 00111 11122233322 4467999999999
Q ss_pred Chhhhhhccee-EEecCcchhHHhhcCceeecchhhHHHH
Q 001023 890 DVSMIQMADVG-VGISGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 890 Dv~mL~~AdVG-Igisg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
|+.|++.|+++ |++.... . .+|+++.++.-+..+
T Consensus 169 Di~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 169 DVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred HHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 99999999998 6774322 1 689999887766554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00031 Score=75.43 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=95.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCC----CceEEEE-----eCCCHHHHHHHHHHHHHhhc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQVII-----NSNSKESCRKSLEDAIAMSK 802 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~----~~~~~~i-----~~~~~~~~~~~~~~~~~~~~ 802 (1185)
..+.+.+.++|++|+++|+++.++||.....+..+...+|+... +...+.- .....+..++.++.......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 45678889999999999999999999999999999888886321 1101110 01111233333322220110
Q ss_pred ccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHHHhh-
Q 001023 803 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALVKTR- 876 (1185)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~v---i~~r~sP--~qKa~iV~~lk~~- 876 (1185)
..... ...... .... .+-+.+. ..+.....+..+....+.+ .+....| ..|...++.+.+.
T Consensus 99 ~~~~~-~~~~~~-------~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~ 165 (231)
T 1wr8_A 99 NARTS-YTMPDR-------RAGL--VIMRETI---NVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFL 165 (231)
T ss_dssp TCCBC-TTGGGC-------SSCE--EECTTTS---CHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHH
T ss_pred CceEE-ecCCCc-------eeeE--EEECCCC---CHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHc
Confidence 00000 000000 0111 2211000 0112222222221223322 1123333 4799888887654
Q ss_pred --CCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecch
Q 001023 877 --TSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 877 --~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f 922 (1185)
....|+++||+.||.+|++.|++||++. +.+. .+..||+++.+.
T Consensus 166 ~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~~--~~~~a~~v~~~~ 212 (231)
T 1wr8_A 166 GIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKI--LKENADYVTKKE 212 (231)
T ss_dssp TSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHTTCSEECSSC
T ss_pred CCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCHH--HHhhCCEEecCC
Confidence 3357999999999999999999999994 3333 456899998763
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00012 Score=77.96 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=78.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-.+.+|+.++++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~---------------------------------- 147 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD---------------------------------- 147 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----------------------------------
Confidence 4578999999999999999999999999888888888888743110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccH------HHHHHHHHhhCCC-eEEEE
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK------AGIVALVKTRTSD-MTLAI 884 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qK------a~iV~~lk~~~g~-~vl~i 884 (1185)
.++++...+..| ..+.+.+.- ... .+++|
T Consensus 148 -------------------------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~~~v~v 183 (231)
T 3kzx_A 148 -------------------------------------------SIIGSGDTGTIKPSPEPVLAALTNINI-EPSKEVFFI 183 (231)
T ss_dssp -------------------------------------------EEEEETSSSCCTTSSHHHHHHHHHHTC-CCSTTEEEE
T ss_pred -------------------------------------------eEEcccccCCCCCChHHHHHHHHHcCC-CcccCEEEE
Confidence 112221112122 122222222 344 79999
Q ss_pred cCCcCChhhhhhcce-eEEecCcchhHHhhcCceeecchhhHHHHH
Q 001023 885 GDGANDVSMIQMADV-GVGISGQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 885 GDG~NDv~mL~~AdV-GIgisg~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
||+.||+.|.++|++ +|.+...+. ..+|+++.++.-|..+|
T Consensus 184 GD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 184 GDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp ESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 999999999999997 556633322 36889999988877664
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.67 E-value=7.6e-05 Score=78.75 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 44699999999999999999999999888877777777663
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00011 Score=82.58 Aligned_cols=60 Identities=18% Similarity=0.283 Sum_probs=47.2
Q ss_pred ecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeec
Q 001023 860 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 920 (1185)
Q Consensus 860 r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~ 920 (1185)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++..... ..+..||+++.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~ 281 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLP 281 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECS
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEc
Confidence 44454 79999998876543 479999999999999999999999954322 25668999887
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.64 E-value=7.5e-05 Score=79.70 Aligned_cols=117 Identities=21% Similarity=0.195 Sum_probs=71.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+.++++.|++.|+++.++|+... +..+....|+...-.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~----------------------------------- 134 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH----------------------------------- 134 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC-----------------------------------
Confidence 4789999999999999999999999744 666666777632110
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
.++.+... -...-.|.-=..+.+.+.- ....++||||+.||+.
T Consensus 135 --------------~i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs~~Di~ 177 (233)
T 3nas_A 135 --------------AIVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDAEAGIS 177 (233)
T ss_dssp --------------EECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECSHHHHH
T ss_pred --------------EEeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCCHHHHH
Confidence 11111100 0000011111222233322 4567999999999999
Q ss_pred hhhhcceeEEecCcchhHHhhcCceeecchhhH
Q 001023 893 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 925 (1185)
Q Consensus 893 mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l 925 (1185)
|.+.|++++.+.+... ....||+++.++.-+
T Consensus 178 ~a~~aG~~~~~~~~~~--~~~~ad~v~~s~~el 208 (233)
T 3nas_A 178 AIKSAGMFAVGVGQGQ--PMLGADLVVRQTSDL 208 (233)
T ss_dssp HHHHTTCEEEECC---------CSEECSSGGGC
T ss_pred HHHHcCCEEEEECCcc--ccccCCEEeCChHhC
Confidence 9999999997744332 233899999886664
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00018 Score=78.38 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=44.0
Q ss_pred ccHHHHHHHHHhh----CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 864 LQKAGIVALVKTR----TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 864 ~qKa~iV~~lk~~----~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
-.|+.-++.+.+. ....|+++|||.||.+|++.|++||++........+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 4699999888765 335799999999999999999999999443311144568877654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00015 Score=78.09 Aligned_cols=137 Identities=12% Similarity=0.141 Sum_probs=86.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.||+.++++.|+++|+++.++|+.....+..+.. ||... ..++.-+..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~-------------------------- 126 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHAS-------------------------- 126 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeE--------------------------
Confidence 4689999999999999999999999999888887776 66432 222111100
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
..++.+..... +-..-.+.+....+|..+++.+.- ....+++|||+.||+
T Consensus 127 -----------------~~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGDs~~Di 176 (236)
T 2fea_A 127 -----------------FDNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDV 176 (236)
T ss_dssp -----------------CSSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGH
T ss_pred -----------------EcCCceEEecC------------CCCccccccccCCcHHHHHHHHhc-cCCeEEEEeCChHHH
Confidence 00000000000 000000111125678888888865 667899999999999
Q ss_pred hhhhhcceeEEecCcchhHHhh--cCceeecchhhHHHH
Q 001023 892 SMIQMADVGVGISGQEGRQAVM--SSDFAMGQFRFLVTL 928 (1185)
Q Consensus 892 ~mL~~AdVGIgisg~e~~qA~~--aSD~~i~~f~~l~~l 928 (1185)
.|.+.|++.+...+.. ..... .+|+++.++.-+..+
T Consensus 177 ~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 177 EAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp HHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred HHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 9999999988643221 11222 278999888877665
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.0002 Score=78.88 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=47.1
Q ss_pred ecCcc--cHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 860 RVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 860 r~sP~--qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
.+.|. .|+..++.+.+. ....|+++||+.||.+|++.|++||++..... ..+..||+++.+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~ 248 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLT 248 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEcc
Confidence 45555 899999888764 33579999999999999999999999943322 255679998865
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00031 Score=77.48 Aligned_cols=58 Identities=24% Similarity=0.325 Sum_probs=46.2
Q ss_pred ccHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecch
Q 001023 864 LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f 922 (1185)
..|...++.+.+.. ...|+++||+.||.+|++.|++||++..... ..+..||+++.+.
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDN 250 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCG
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCC
Confidence 48999998887653 3579999999999999999999999944322 2567899998653
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.60 E-value=7.2e-05 Score=78.15 Aligned_cols=120 Identities=11% Similarity=0.123 Sum_probs=79.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+++.+.++.|++.|++++++|+...+.+..+....|+...-.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 133 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD----------------------------------- 133 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee-----------------------------------
Confidence 578999999999999999999999999988888888888743111
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhhCCCeEEEEcCCcCC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGAND 890 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~--qKa~iV~~lk~~~g~~vl~iGDG~ND 890 (1185)
.++.+.... ...|+ --..+.+.+.- ....+++|||+.||
T Consensus 134 --------------~~~~~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~D 174 (214)
T 3e58_A 134 --------------IVLSGEEFK------------------------ESKPNPEIYLTALKQLNV-QASRALIIEDSEKG 174 (214)
T ss_dssp --------------EEEEGGGCS------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECSHHH
T ss_pred --------------eEeeccccc------------------------CCCCChHHHHHHHHHcCC-ChHHeEEEeccHhh
Confidence 111111100 00111 11122222222 44679999999999
Q ss_pred hhhhhhcceeEEe-c-CcchhHHhhcCceeecchhhHHH
Q 001023 891 VSMIQMADVGVGI-S-GQEGRQAVMSSDFAMGQFRFLVT 927 (1185)
Q Consensus 891 v~mL~~AdVGIgi-s-g~e~~qA~~aSD~~i~~f~~l~~ 927 (1185)
+.|.+.|++++.+ . +.... ....+|+++.++.-+..
T Consensus 175 i~~a~~aG~~~~~~~~~~~~~-~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 175 IAAGVAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHTTCEEEEECCSSSCC-CCTTSSEEESSGGGGGG
T ss_pred HHHHHHCCCEEEEECCCCccc-hhccHHHHHHHHHHHHh
Confidence 9999999998755 3 22221 23678999988766543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.59 E-value=9.9e-05 Score=78.42 Aligned_cols=120 Identities=17% Similarity=0.125 Sum_probs=81.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+++.+.++.|++.|+++.++|+...+.+..+...+|+...-.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 4678999999999999999999999999888888887777742110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCc--ccHHHHHHHHHhh---CCCeEEEEcC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--LQKAGIVALVKTR---TSDMTLAIGD 886 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP--~qKa~iV~~lk~~---~g~~vl~iGD 886 (1185)
.+ +++...+ +-|...++.+.+. ....+++|||
T Consensus 141 ---------------~~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD 177 (230)
T 3um9_A 141 ---------------HL----------------------------ISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSC 177 (230)
T ss_dssp ---------------EE----------------------------EEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred ---------------ee----------------------------EehhhcccCCCChHHHHHHHHHhCCCcccEEEEeC
Confidence 01 1111111 1223333333222 3467999999
Q ss_pred CcCChhhhhhcceeEEe--cCcch-hHHhhcCceeecchhhHHHH
Q 001023 887 GANDVSMIQMADVGVGI--SGQEG-RQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 887 G~NDv~mL~~AdVGIgi--sg~e~-~qA~~aSD~~i~~f~~l~~l 928 (1185)
+.||+.|.++|++++.+ .|... ......+|+++.++.-+..+
T Consensus 178 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 178 NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 99999999999999866 22111 11235789999988777655
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00021 Score=75.78 Aligned_cols=117 Identities=15% Similarity=0.032 Sum_probs=80.1
Q ss_pred cccCCChHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 732 DKLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aG-Ikv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
-++.+|+.+.++.|++.| +++.++|+.....+..+...+|+...-
T Consensus 104 ~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f---------------------------------- 149 (234)
T 3ddh_A 104 IELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF---------------------------------- 149 (234)
T ss_dssp CCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC----------------------------------
T ss_pred CCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh----------------------------------
Confidence 367899999999999999 999999988887777777777763210
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDG 887 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG 887 (1185)
.. +++...| |...++.+.+. ....+++|||+
T Consensus 150 -------------------------------------------~~-~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~ 183 (234)
T 3ddh_A 150 -------------------------------------------DH-IEVMSDK--TEKEYLRLLSILQIAPSELLMVGNS 183 (234)
T ss_dssp -------------------------------------------SE-EEEESCC--SHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred -------------------------------------------he-eeecCCC--CHHHHHHHHHHhCCCcceEEEECCC
Confidence 01 2333333 55555544433 34679999999
Q ss_pred c-CChhhhhhcceeEEec--C----cchhHHhh-cCceeecchhhHHHH
Q 001023 888 A-NDVSMIQMADVGVGIS--G----QEGRQAVM-SSDFAMGQFRFLVTL 928 (1185)
Q Consensus 888 ~-NDv~mL~~AdVGIgis--g----~e~~qA~~-aSD~~i~~f~~l~~l 928 (1185)
. ||+.|.+.|++++.+- | ........ .+|+++.++.-|..+
T Consensus 184 ~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 184 FKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp CCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred cHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 6 9999999999987652 2 11111122 349999888776654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00017 Score=76.60 Aligned_cols=121 Identities=12% Similarity=0.118 Sum_probs=78.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCc---hhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDK---QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 809 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~---~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1185)
.+.+++.++++.|++.|+++.++|+.. ...+..+....|+...-.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~-------------------------------- 146 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFID-------------------------------- 146 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCS--------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhh--------------------------------
Confidence 458999999999999999999999998 777777777777632110
Q ss_pred CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhh--CCCeEEEEcC
Q 001023 810 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTR--TSDMTLAIGD 886 (1185)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~-~lk~~--~g~~vl~iGD 886 (1185)
.++.+.... ...| |..+.+ .+++. ....+++|||
T Consensus 147 -----------------~~~~~~~~~------------------------~~kp--~~~~~~~~~~~lgi~~~~~~~iGD 183 (235)
T 2om6_A 147 -----------------KTFFADEVL------------------------SYKP--RKEMFEKVLNSFEVKPEESLHIGD 183 (235)
T ss_dssp -----------------EEEEHHHHT------------------------CCTT--CHHHHHHHHHHTTCCGGGEEEEES
T ss_pred -----------------hheeccccC------------------------CCCC--CHHHHHHHHHHcCCCccceEEECC
Confidence 011110000 0112 222222 23331 3467999999
Q ss_pred Cc-CChhhhhhcceeEEe--cCcchhHHhhcCceeecchhhHHHH
Q 001023 887 GA-NDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 887 G~-NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
+. ||+.|.+.|++++.+ .|.........+|+++.++.-+..+
T Consensus 184 ~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 184 TYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp CTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred ChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 99 999999999999876 2321111234588998887776655
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00017 Score=76.87 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~a-GIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.+.++.|++. |+++.++|+...+.+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5679999999999999 9999999999988888887777764
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=7.9e-05 Score=82.49 Aligned_cols=126 Identities=11% Similarity=0.018 Sum_probs=82.7
Q ss_pred cccCCChHHHHHHHHHcCC--eEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCC
Q 001023 732 DKLQQGVPEAIESLRAAGI--KVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 809 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGI--kv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1185)
-++.+|+.++++.|++.|+ +++++|+.....+..+....|+...-..
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~------------------------------- 189 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG------------------------------- 189 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE-------------------------------
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce-------------------------------
Confidence 3567899999999999999 9999999998888888888887431110
Q ss_pred CCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CC-CeEEEEc
Q 001023 810 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TS-DMTLAIG 885 (1185)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g-~~vl~iG 885 (1185)
++.+..... .. ..++-|...++.+.+. .. ..|++||
T Consensus 190 ------------------v~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~i~vG 229 (282)
T 3nuq_A 190 ------------------LTYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYENAYFID 229 (282)
T ss_dssp ------------------EECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred ------------------EEEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcccEEEEc
Confidence 111100000 00 1123445555444332 44 6799999
Q ss_pred CCcCChhhhhhcceeEEe--cCcchh---HHhhcCceeecchhhHHHH
Q 001023 886 DGANDVSMIQMADVGVGI--SGQEGR---QAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 886 DG~NDv~mL~~AdVGIgi--sg~e~~---qA~~aSD~~i~~f~~l~~l 928 (1185)
|+.||+.|.++|++|+++ .+.+.. .....+|+++.++.-|..+
T Consensus 230 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 230 DSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999999997655 332211 0134789999887766544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00011 Score=77.50 Aligned_cols=47 Identities=6% Similarity=0.009 Sum_probs=36.8
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhhH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 925 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~l 925 (1185)
....|+++||+.||+.|++.|++++.+.+... ....||+++.++.-+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~--~~~~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH--HhccccchhcCHHhC
Confidence 34679999999999999999999998754332 233899999876653
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00024 Score=72.86 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=39.3
Q ss_pred CCCeEEEEcCCcCChhhhhhccee-EEe-cCcchhHHh----hcCceeecchhhHHHHHH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVG-VGI-SGQEGRQAV----MSSDFAMGQFRFLVTLLL 930 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVG-Igi-sg~e~~qA~----~aSD~~i~~f~~l~~lll 930 (1185)
....+++|||+.||+.|.++|++. |++ .|....... ..+|+++.++.-+..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 456799999999999999999974 355 333222122 457999999888877754
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00046 Score=74.17 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++.|+++.++|+.....+..+....|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 57899999999999999999999998888888888777763
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00036 Score=76.31 Aligned_cols=54 Identities=19% Similarity=0.291 Sum_probs=44.2
Q ss_pred ccHHHHHHHHHhhCC-----CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 864 LQKAGIVALVKTRTS-----DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~g-----~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
..|+..++.+.+..| ..|+++||+.||.+|++.|++||+|..... . +++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 689999998877544 679999999999999999999999955544 2 67777654
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00018 Score=78.91 Aligned_cols=41 Identities=29% Similarity=0.186 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++.|+++.++|+...+.+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 67899999999999999999999999988888887777764
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00012 Score=79.92 Aligned_cols=41 Identities=34% Similarity=0.370 Sum_probs=34.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
..+.+++.+.++.|++.|+++.++|++..+.+..+....|+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 35679999999999999999999999988877777666655
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=79.03 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=82.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
.-++.+|+.++++.|++.|+++.++|+.....+..+....|+..--..
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-------------------------------- 155 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE-------------------------------- 155 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS--------------------------------
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc--------------------------------
Confidence 446789999999999999999999999998888888887776310000
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhh--CCCeEEEEcCC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDG 887 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~l-k~~--~g~~vl~iGDG 887 (1185)
.++.+.... .. ++-|....+.+ +.. ....+++|||+
T Consensus 156 ----------------~i~~~~~~~-----------------------~~--~Kp~~~~~~~~~~~lgi~~~~~i~iGD~ 194 (259)
T 4eek_A 156 ----------------HIYDPSWVG-----------------------GR--GKPHPDLYTFAAQQLGILPERCVVIEDS 194 (259)
T ss_dssp ----------------CEECGGGGT-----------------------TC--CTTSSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred ----------------eEEeHhhcC-----------------------cC--CCCChHHHHHHHHHcCCCHHHEEEEcCC
Confidence 011110000 00 11112222222 221 34679999999
Q ss_pred cCChhhhhhccee-EEec-Ccch----h-H-HhhcCceeecchhhHHHHHH
Q 001023 888 ANDVSMIQMADVG-VGIS-GQEG----R-Q-AVMSSDFAMGQFRFLVTLLL 930 (1185)
Q Consensus 888 ~NDv~mL~~AdVG-Igis-g~e~----~-q-A~~aSD~~i~~f~~l~~lll 930 (1185)
.||+.|.+.|+++ |++. |... . . ....+|+++.++.-|..+|-
T Consensus 195 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 195 VTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALA 245 (259)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHH
Confidence 9999999999998 5663 4211 1 1 22458999999988887753
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00016 Score=77.05 Aligned_cols=123 Identities=10% Similarity=-0.027 Sum_probs=82.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+++.++++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 143 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD---------------------------------- 143 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC----------------------------------
Confidence 4678999999999999999999999999888888888887743111
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHH-HHhh--CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVAL-VKTR--TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~-lk~~--~g~~vl~iGDG~ 888 (1185)
.++.+.... .++-|..+.+. ++.. ....+++|||+.
T Consensus 144 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (233)
T 3umb_A 144 ---------------HVLSVDAVR--------------------------LYKTAPAAYALAPRAFGVPAAQILFVSSNG 182 (233)
T ss_dssp ---------------EEEEGGGTT--------------------------CCTTSHHHHTHHHHHHTSCGGGEEEEESCH
T ss_pred ---------------EEEEecccC--------------------------CCCcCHHHHHHHHHHhCCCcccEEEEeCCH
Confidence 011111000 01112222222 2221 446799999999
Q ss_pred CChhhhhhcceeEEe--cCcch-hHHhhcCceeecchhhHHHHH
Q 001023 889 NDVSMIQMADVGVGI--SGQEG-RQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 889 NDv~mL~~AdVGIgi--sg~e~-~qA~~aSD~~i~~f~~l~~ll 929 (1185)
||+.|.+.|++++.+ .|... ......+|+++.++.-+..+|
T Consensus 183 ~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 183 WDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 999999999999876 21111 112346999999988887764
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00061 Score=74.53 Aligned_cols=64 Identities=20% Similarity=0.346 Sum_probs=48.7
Q ss_pred ccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchhh--HHHH
Q 001023 864 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTL 928 (1185)
Q Consensus 864 ~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~~--l~~l 928 (1185)
..|...++.+.+. ....|+++||+.||..|++.|++||++..... ..+..||+++.+..- +...
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCchhhHHHH
Confidence 4788888877664 33579999999999999999999999943322 256789999877555 5444
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00066 Score=72.25 Aligned_cols=122 Identities=17% Similarity=0.167 Sum_probs=81.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.++++.|++. +++.++|+...+.+..+....|+..--.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 146 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK---------------------------------- 146 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----------------------------------
Confidence 36789999999999999 9999999998888888877777742110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCC----CeEEEEcCC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS----DMTLAIGDG 887 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g----~~vl~iGDG 887 (1185)
.++.+.... ..+-|....+.+.+..| ..+++|||+
T Consensus 147 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~ 185 (238)
T 3ed5_A 147 ---------------DIFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTLIIGDS 185 (238)
T ss_dssp ---------------EEEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEEEEESC
T ss_pred ---------------eEEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeEEECCC
Confidence 011111000 01122333333332234 579999999
Q ss_pred c-CChhhhhhccee-EEe-cCcchhHHhhcCceeecchhhHHHHH
Q 001023 888 A-NDVSMIQMADVG-VGI-SGQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 888 ~-NDv~mL~~AdVG-Igi-sg~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
. ||+.|.+.|+++ |++ .|.........+|+++.++.-+..+|
T Consensus 186 ~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 186 LTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 8 999999999995 455 33211114457899999988887764
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00045 Score=74.39 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++.+|+.++++.|++.|+++.++|+...+.+..+-..+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999888877777777776
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00019 Score=77.36 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=76.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
.++.+|+.+.++.|++.|+++.++|+...+.+...... |+..--..
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 153 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--------------------------------- 153 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc---------------------------------
Confidence 46789999999999999999999999887766655555 55321000
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhh--CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTR--TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~-~lk~~--~g~~vl~iGDG~ 888 (1185)
..++.+... .+ ++-|....+ .++.. ....|++|||+.
T Consensus 154 --------------d~i~~~~~~------------------------~~--~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 154 --------------ELMVTAFDV------------------------KY--GKPNPEPYLMALKKGGLKADEAVVIENAP 193 (243)
T ss_dssp --------------GGEECTTTC------------------------SS--CTTSSHHHHHHHHHTTCCGGGEEEEECSH
T ss_pred --------------ceEEeHHhC------------------------CC--CCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 001111110 00 111222222 22221 346799999999
Q ss_pred CChhhhhhccee-EEe-cCcchhHH--hhcCceeecchhhHHHH
Q 001023 889 NDVSMIQMADVG-VGI-SGQEGRQA--VMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 889 NDv~mL~~AdVG-Igi-sg~e~~qA--~~aSD~~i~~f~~l~~l 928 (1185)
||+.|.+.|+++ |++ .|...... ...+|+++.++.-|..+
T Consensus 194 ~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 999999999995 465 33332111 23599999998887665
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.37 E-value=7e-05 Score=78.64 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=35.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
-++.+|+.+.++.|++. +++.++|+.....+..+...+|+
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l 121 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPF 121 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcCh
Confidence 35789999999999999 99999999988888888777776
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00026 Score=76.09 Aligned_cols=125 Identities=10% Similarity=0.102 Sum_probs=75.7
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
..++.+|+.++++.|++.|+++.++|+.....+...... |+..--..
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~-------------------------------- 152 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA-------------------------------- 152 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG--------------------------------
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC--------------------------------
Confidence 347789999999999999999999999887766666555 65321000
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDG 887 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG 887 (1185)
..++.+... .. ++-|..+.+.+.+. ....+++|||+
T Consensus 153 ---------------~~~~~~~~~------------------------~~--~kp~~~~~~~~~~~lg~~~~~~i~vGD~ 191 (247)
T 3dv9_A 153 ---------------NLMVTAFDV------------------------KY--GKPNPEPYLMALKKGGFKPNEALVIENA 191 (247)
T ss_dssp ---------------GGEECGGGC------------------------SS--CTTSSHHHHHHHHHHTCCGGGEEEEECS
T ss_pred ---------------CeEEecccC------------------------CC--CCCCCHHHHHHHHHcCCChhheEEEeCC
Confidence 001111100 00 11122222222221 44679999999
Q ss_pred cCChhhhhhccee-EEec-CcchhHH--hhcCceeecchhhHHHHH
Q 001023 888 ANDVSMIQMADVG-VGIS-GQEGRQA--VMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 888 ~NDv~mL~~AdVG-Igis-g~e~~qA--~~aSD~~i~~f~~l~~ll 929 (1185)
.||+.|.++|+++ |++. |...... ...+|+++.++.-+..+|
T Consensus 192 ~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 192 PLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999999986 4553 3322111 137999999988776653
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00047 Score=74.00 Aligned_cols=41 Identities=27% Similarity=0.270 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999888888888888874
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00064 Score=71.53 Aligned_cols=118 Identities=13% Similarity=0.161 Sum_probs=80.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.++++.|++ |+++.++|+...+.+..+-..+|+..--
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f------------------------------------ 126 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF------------------------------------ 126 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC------------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe------------------------------------
Confidence 577999999999999 9999999998888887777777874311
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhC---CCeEEEEcCCcC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGAN 889 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~---g~~vl~iGDG~N 889 (1185)
..++++.-.++-|..+.+.+-+.. ...+++|||+.|
T Consensus 127 -----------------------------------------~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~ 165 (210)
T 2ah5_A 127 -----------------------------------------DGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKF 165 (210)
T ss_dssp -----------------------------------------SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred -----------------------------------------eeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHH
Confidence 112333222345666665554433 357999999999
Q ss_pred ChhhhhhcceeE-Eec-CcchhHH-h-hcCceeecchhhHHHH
Q 001023 890 DVSMIQMADVGV-GIS-GQEGRQA-V-MSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 890 Dv~mL~~AdVGI-gis-g~e~~qA-~-~aSD~~i~~f~~l~~l 928 (1185)
|+.|-++|++.. ++. |...... . ..+|+++.++.-+..+
T Consensus 166 Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 166 DMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred HHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999842 442 2211112 2 3589999887665543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00072 Score=71.85 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=78.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+++.+.++.|++. +++.++|+.....+..+....|+...-.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~----------------------------------- 143 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD----------------------------------- 143 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc-----------------------------------
Confidence 5679999999999999 9999999999888888887777742110
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhh--CCCeEEEEcCCc-
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDGA- 888 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~l-k~~--~g~~vl~iGDG~- 888 (1185)
.++.+.... . ++-|..+.+.+ +.. ....+++|||+.
T Consensus 144 --------------~~~~~~~~~------------------------~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 183 (234)
T 3u26_A 144 --------------SITTSEEAG------------------------F--FKPHPRIFELALKKAGVKGEEAVYVGDNPV 183 (234)
T ss_dssp --------------EEEEHHHHT------------------------B--CTTSHHHHHHHHHHHTCCGGGEEEEESCTT
T ss_pred --------------eeEeccccC------------------------C--CCcCHHHHHHHHHHcCCCchhEEEEcCCcH
Confidence 011110000 0 11122222222 221 446799999997
Q ss_pred CChhhhhhccee---EEecCcchhHHhhcCceeecchhhHHHHH
Q 001023 889 NDVSMIQMADVG---VGISGQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 889 NDv~mL~~AdVG---Igisg~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
||+.|.+.|++. |...+. .......+|+++.++.-+..+|
T Consensus 184 ~Di~~a~~aG~~~~~v~~~~~-~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 184 KDCGGSKNLGMTSILLDRKGE-KREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTHHHHHTTTCEEEEECSSST-TGGGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCC-ccccccCCCEeeCCHHHHHHHH
Confidence 999999999954 433222 1223458999999988877664
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00076 Score=71.81 Aligned_cols=121 Identities=15% Similarity=0.112 Sum_probs=80.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+++.++++.|+ .|+++.++|+...+.+..+...+|+...-.
T Consensus 106 ~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~---------------------------------- 150 (240)
T 3qnm_A 106 SGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK---------------------------------- 150 (240)
T ss_dssp CCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce----------------------------------
Confidence 357899999999999 999999999988888877777777642110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
.++.+.... ..+-|....+.+.+. ....+++|||+.
T Consensus 151 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~ 189 (240)
T 3qnm_A 151 ---------------KIILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESLMIGDSW 189 (240)
T ss_dssp ---------------EEEEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEEEEESCT
T ss_pred ---------------eEEEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEEEECCCc
Confidence 011111000 012233333333222 346799999995
Q ss_pred -CChhhhhhcceeEEecCcch-hHHhhcCceeecchhhHHHH
Q 001023 889 -NDVSMIQMADVGVGISGQEG-RQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 889 -NDv~mL~~AdVGIgisg~e~-~qA~~aSD~~i~~f~~l~~l 928 (1185)
||+.|.+.|++++.+-.... ......+|+++.++.-+..+
T Consensus 190 ~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 190 EADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp TTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred hHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 99999999999986622221 11445799999998887765
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00035 Score=74.46 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999888888888887774
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0024 Score=70.47 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+-+.+.++|++|+++|+++.+.||.....+..+...+++-
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 45577899999999999999999999999999999988763
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00062 Score=70.42 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=37.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCc-hhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDK-QETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~-~eTAi~Ia~~~gll 773 (1185)
-++.+|+.++|+.|++.|+++.++||.. ...+..+....|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 68888888888874
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00034 Score=75.89 Aligned_cols=61 Identities=18% Similarity=0.293 Sum_probs=46.2
Q ss_pred ecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhc-------Cceeecch
Q 001023 860 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMS-------SDFAMGQF 922 (1185)
Q Consensus 860 r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~a-------SD~~i~~f 922 (1185)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++.. .+. .+.. ||++..+.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~~--~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE--LLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH--HHHHHHHHCCTTEEECSSC
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcHH--HHHHHhcccccceeecCCc
Confidence 44554 79999998877533 579999999999999999999999943 333 3342 78887653
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=69.92 Aligned_cols=52 Identities=21% Similarity=0.292 Sum_probs=37.4
Q ss_pred CCCeEEEEcCCcCChhhhhhccee--EEe-cCcchhH-HhhcCceeecchhhHHHH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVG--VGI-SGQEGRQ-AVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVG--Igi-sg~e~~q-A~~aSD~~i~~f~~l~~l 928 (1185)
....++||||+.||+.|-++|++. |++ .|....+ ....+|+++.++.-+..+
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 445789999999999999999975 555 3321111 224589999988777665
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00031 Score=75.93 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=36.5
Q ss_pred CeEEEEcCCcCChhhhhhcceeE-Ee-cCcchhHHhhcCceeecchhhHHHH
Q 001023 879 DMTLAIGDGANDVSMIQMADVGV-GI-SGQEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 879 ~~vl~iGDG~NDv~mL~~AdVGI-gi-sg~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
..+++|||+.||+.|.++|++.+ ++ .|.........+|+++.++.-+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHH
Confidence 67999999999999999999654 33 2222222567899999887765444
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0015 Score=66.94 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=31.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
.+.+++.+.++.|++.|++++++|+... .+..+....|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 3679999999999999999999998764 45556666665
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00092 Score=70.73 Aligned_cols=52 Identities=12% Similarity=0.277 Sum_probs=38.5
Q ss_pred CCCeEEEEcCCcCChhhhhhccee-EEecCcch------hHHhhc-CceeecchhhHHHH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVG-VGISGQEG------RQAVMS-SDFAMGQFRFLVTL 928 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVG-Igisg~e~------~qA~~a-SD~~i~~f~~l~~l 928 (1185)
....+++|||+.||+.|.+.|+++ |++..... ...+.+ +|+++.+..-+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 446799999999999999999998 67743322 113344 99999887776655
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0041 Score=67.09 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=33.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
++.+|+.++++.|+ .|+++.++|+.....+.......|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999888777777666666
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0014 Score=68.15 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=77.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+|+.+ ++.|++. +++.++|+...+.+..+...+|+...-.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 116 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK---------------------------------- 116 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc----------------------------------
Confidence 367899999 9999999 9999999999888888888888742110
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhhCCCeEEEEcCCcCC
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTRTSDMTLAIGDGAND 890 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~-~lk~~~g~~vl~iGDG~ND 890 (1185)
.++.+.... +..| |..+.+ .+++.....+++|||+.||
T Consensus 117 ---------------~~~~~~~~~------------------------~~Kp--~~~~~~~~~~~~~~~~~~~vGD~~~D 155 (201)
T 2w43_A 117 ---------------GIFSAESVK------------------------EYKP--SPKVYKYFLDSIGAKEAFLVSSNAFD 155 (201)
T ss_dssp ---------------EEEEGGGGT------------------------CCTT--CHHHHHHHHHHHTCSCCEEEESCHHH
T ss_pred ---------------EEEehhhcC------------------------CCCC--CHHHHHHHHHhcCCCcEEEEeCCHHH
Confidence 111111100 0112 123322 2333124568999999999
Q ss_pred hhhhhhcceeEEe-c-Ccchh-HHhhcCceeecchhhHHHH
Q 001023 891 VSMIQMADVGVGI-S-GQEGR-QAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdVGIgi-s-g~e~~-qA~~aSD~~i~~f~~l~~l 928 (1185)
+.|.+.|++++.+ . |.... .....+|+++.++.-+..+
T Consensus 156 i~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 156 VIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred hHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999999998644 2 22111 1123589999887776655
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.00085 Score=72.36 Aligned_cols=119 Identities=8% Similarity=0.004 Sum_probs=79.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+++.+.++.|++. +++.++|+...+.+..+...+|+. -+ .
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f~--~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-WD--M--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-CS--E---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-cc--e---------------------------------
Confidence 5679999999999985 999999999888888887777763 10 0
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 889 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~N 889 (1185)
++.+... -..+-|..+.+.+.+. ....|++|||+.|
T Consensus 163 ---------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~ 201 (254)
T 3umc_A 163 ---------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNY 201 (254)
T ss_dssp ---------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHH
T ss_pred ---------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCchH
Confidence 0000000 0112233333333322 3467999999999
Q ss_pred ChhhhhhcceeEEecC------cchhH---HhhcCceeecchhhHHHHH
Q 001023 890 DVSMIQMADVGVGISG------QEGRQ---AVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 890 Dv~mL~~AdVGIgisg------~e~~q---A~~aSD~~i~~f~~l~~ll 929 (1185)
|+.|.+.|++++.+-. ..... ....+|+++.++.-|..+|
T Consensus 202 Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 202 DLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred hHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 9999999999987632 11100 1457899999988887763
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0016 Score=70.59 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|+ |+++.++|+.....+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999988888888888864
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0016 Score=69.95 Aligned_cols=122 Identities=9% Similarity=0.065 Sum_probs=81.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+++.++++.|++. +++.++|+...+.+..+...+|+. -+ .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-f~-------~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-WD-------V---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-CS-------C----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-ee-------E----------------------------
Confidence 5689999999999997 999999999888888888777763 00 0
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 889 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~N 889 (1185)
++.+. .+....| |...++.+.+. ....+++|||+.|
T Consensus 159 ---------------~~~~~------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~iGD~~~ 197 (254)
T 3umg_A 159 ---------------IIGSD------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLAAAHNG 197 (254)
T ss_dssp ---------------CCCHH------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred ---------------EEEcC------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEEeCChH
Confidence 00000 0001112 23333333332 3367999999999
Q ss_pred ChhhhhhcceeEEecCcc---hh------HHhhcCceeecchhhHHHHHHHH
Q 001023 890 DVSMIQMADVGVGISGQE---GR------QAVMSSDFAMGQFRFLVTLLLVH 932 (1185)
Q Consensus 890 Dv~mL~~AdVGIgisg~e---~~------qA~~aSD~~i~~f~~l~~lll~~ 932 (1185)
|+.|.+.|++++.+-... |. .....+|+++.++.-|..+|..+
T Consensus 198 Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 198 DLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred hHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 999999999998763211 10 02457899999999888875433
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0011 Score=73.63 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=44.9
Q ss_pred ccHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecchh
Q 001023 864 LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 923 (1185)
Q Consensus 864 ~qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f~ 923 (1185)
..|...++.+.+.. ...++++||+.||.+|++.|++||++..... .....||+++....
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~-~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQ-EAKNLHNLITDSEY 271 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCH-HHHHHCCCBCSSCH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccH-HHHHhCCEEcCCCC
Confidence 46888887776542 3569999999999999999999999944322 25667999887643
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0062 Score=62.91 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=36.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCch---hhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQ---ETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~---eTAi~Ia~~~gll 773 (1185)
-++.+|+.++++.|+++|+++.++|+-.. +.+..+....|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 36889999999999999999999998765 7788888888874
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0016 Score=71.04 Aligned_cols=124 Identities=11% Similarity=0.105 Sum_probs=77.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.+|+.++++.|++.|+++.++|+... .+..+...+|+...-.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~----------------------------------- 149 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFD----------------------------------- 149 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCS-----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhh-----------------------------------
Confidence 5789999999999999999999998655 3566777777642110
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCc-CCh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGA-NDV 891 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~-NDv 891 (1185)
.++.+.... +..-.|.--..+.+.+.- ....+++|||+. ||+
T Consensus 150 --------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~~~~Di 192 (263)
T 3k1z_A 150 --------------FVLTSEAAG----------------------WPKPDPRIFQEALRLAHM-EPVVAAHVGDNYLCDY 192 (263)
T ss_dssp --------------CEEEHHHHS----------------------SCTTSHHHHHHHHHHHTC-CGGGEEEEESCHHHHT
T ss_pred --------------EEEeecccC----------------------CCCCCHHHHHHHHHHcCC-CHHHEEEECCCcHHHH
Confidence 011110000 000011111122222221 446799999997 999
Q ss_pred hhhhhcceeEEe--cCcchhH---HhhcCceeecchhhHHHHH
Q 001023 892 SMIQMADVGVGI--SGQEGRQ---AVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 892 ~mL~~AdVGIgi--sg~e~~q---A~~aSD~~i~~f~~l~~ll 929 (1185)
.|.++|++++.+ .+..... ....+|+++.++.-+..+|
T Consensus 193 ~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 193 QGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 999999999866 2322111 2236899999988877765
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0029 Score=67.06 Aligned_cols=53 Identities=9% Similarity=-0.013 Sum_probs=39.5
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeEEecCcc----------hhHHhhcCceeecchhhHHHHH
Q 001023 877 TSDMTLAIGDGA-NDVSMIQMADVGVGISGQE----------GRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 877 ~g~~vl~iGDG~-NDv~mL~~AdVGIgisg~e----------~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
....+++|||+. ||+.|.++|++++.+-... .......+|+++.++.-+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 446799999996 9999999999998762211 0113367999999988776664
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0029 Score=69.61 Aligned_cols=40 Identities=20% Similarity=-0.002 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCchhhHHHHHHHcCc
Q 001023 733 KLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~a-GIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
.+.+|+.+.++.|++. |+++.++|+...+.+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4579999999999999 999999999988887777777666
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0014 Score=69.51 Aligned_cols=29 Identities=31% Similarity=0.292 Sum_probs=27.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCch
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQ 760 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~ 760 (1185)
.++.+|+.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 57889999999999999999999999876
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.094 Score=56.53 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLT---GD~~eTAi~Ia~~~gll 773 (1185)
.+-++..++++.|++.|+++.++| |.............|+-
T Consensus 32 ~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 32 TAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp EECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 366889999999999999999999 88888887777777764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0059 Score=64.52 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=39.4
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeEEe--cCcchhHHhhcCceeecchhhHHHHH
Q 001023 877 TSDMTLAIGDGA-NDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 877 ~g~~vl~iGDG~-NDv~mL~~AdVGIgi--sg~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
....+++|||+. ||+.|.+.|++++.. .|.........+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 446799999998 999999999998755 22222112457899999988877663
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=96.29 E-value=0.013 Score=63.54 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=37.4
Q ss_pred cHHHHHHHHHhhCCCeEEEEcC----CcCChhhhhhcc-eeEEecCcch
Q 001023 865 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEG 908 (1185)
Q Consensus 865 qKa~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~e~ 908 (1185)
.|+.-++.|.+ ...-|+++|| |.||.+||+.|. +|+++.+.+.
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 89999999887 7788999999 799999999995 8999965443
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0095 Score=64.97 Aligned_cols=43 Identities=12% Similarity=0.105 Sum_probs=34.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLT 774 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTG---D~~eTAi~Ia~~~gll~ 774 (1185)
+++-+++.++|++|+++|+++.++|| ............+|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 44556899999999999999999999 55566666677778753
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0094 Score=64.97 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|++ ++++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577999999999998 6999999999988888888888874
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.052 Score=59.06 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=36.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLT---GD~~eTAi~Ia~~~gll 773 (1185)
.++-+++.++|+.|++.|+++.++| |............+|+-
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 6677999999999999999999999 87777777777888874
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=95.98 E-value=0.027 Score=61.25 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=37.7
Q ss_pred EeeecccccCCChHHHHHHHHHcCCeEEEEcC---CchhhHHHHHHHcCccCC
Q 001023 726 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLTS 775 (1185)
Q Consensus 726 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTG---D~~eTAi~Ia~~~gll~~ 775 (1185)
|.+.=.+++-+++.++|++|+++|+++.++|| ............+|+...
T Consensus 17 GTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 17 GVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 33333556667899999999999999999999 556666666677787543
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=95.93 E-value=0.065 Score=55.05 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=36.0
Q ss_pred EEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 001023 639 FVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 718 (1185)
Q Consensus 639 ~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~i 718 (1185)
+.-|..+.|.+. +-...+.....+.++..+|..++.+|.
T Consensus 134 v~iGn~~~m~~~-----gi~i~~~~~~~~~~~~~~G~T~V~vai------------------------------------ 172 (185)
T 2kmv_A 134 VLIGNREWMIRN-----GLVINNDVNDFMTEHERKGRTAVLVAV------------------------------------ 172 (185)
T ss_dssp EEEECHHHHHHH-----TCCCCHHHHHHHHHHHHTTCEEEEEEE------------------------------------
T ss_pred EEECCHHHHHHc-----CCCCCHHHHHHHHHHHhCCCeEEEEEE------------------------------------
Confidence 344988877542 111223345566777888998888886
Q ss_pred ccCcEEEEeeecccc
Q 001023 719 ENNLCILGASGIEDK 733 (1185)
Q Consensus 719 E~dl~llG~~~ieD~ 733 (1185)
|-.++|++++.|+
T Consensus 173 --dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 --DDELCGLIAIADT 185 (185)
T ss_dssp --TTEEEEEEEEECC
T ss_pred --CCEEEEEEEEEcC
Confidence 6789999999985
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.0035 Score=64.87 Aligned_cols=40 Identities=10% Similarity=-0.012 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+++.++++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999888888887777764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.028 Score=58.45 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=29.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHH
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISI 766 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~I 766 (1185)
++.+|+.++++.|+++|+++.++||-....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 6789999999999999999999999877766443
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.023 Score=59.35 Aligned_cols=42 Identities=29% Similarity=0.251 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
++.||+.++++.|++.|+++.++|+-..+.+..+-...|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999988888853
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.034 Score=60.53 Aligned_cols=42 Identities=19% Similarity=0.202 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCchhhHHHHHHHcCccCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLLTS 775 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLT---GD~~eTAi~Ia~~~gll~~ 775 (1185)
.+ +++.++|++|+++|++++++| |............+|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 44 899999999999999999999 7777777778888888543
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.0035 Score=65.42 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=29.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 769 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~ 769 (1185)
++.+++.++++.|++ |+++.++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999877666555544
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.0024 Score=61.60 Aligned_cols=42 Identities=12% Similarity=0.073 Sum_probs=35.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.++.||+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 456789999999999999999999999888877777776663
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=95.34 E-value=0.0022 Score=66.64 Aligned_cols=31 Identities=26% Similarity=0.352 Sum_probs=26.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhH
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETA 763 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTA 763 (1185)
++.+|+.++++.|++.|+++.++|+.....+
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~ 121 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 121 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHH
Confidence 5789999999999999999999999665543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=95.31 E-value=0.025 Score=65.15 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
++.||+.++++.|+++|+++.++|+-....+..+-...|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999988888888888753
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.10 E-value=0.026 Score=60.96 Aligned_cols=46 Identities=17% Similarity=0.349 Sum_probs=36.0
Q ss_pred CCCeEEEEcCCcCChhhhhhcce-eEEecCcchhHHhhcCceeecchhhH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADV-GVGISGQEGRQAVMSSDFAMGQFRFL 925 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdV-GIgisg~e~~qA~~aSD~~i~~f~~l 925 (1185)
....+++|||..+|+.+=++|++ .|++...+. ...||+++.++.-|
T Consensus 186 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 186 NPQNCIGIEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred ChHHeEEECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 45679999999999999999998 567755443 34689999887664
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.15 Score=53.94 Aligned_cols=60 Identities=15% Similarity=0.173 Sum_probs=40.3
Q ss_pred cHHHHHHHHHhh---CCCeEEEEcCC-cCChhhhhhcceeEEe--cCcchhHHh----hcCceeecchhh
Q 001023 865 QKAGIVALVKTR---TSDMTLAIGDG-ANDVSMIQMADVGVGI--SGQEGRQAV----MSSDFAMGQFRF 924 (1185)
Q Consensus 865 qKa~iV~~lk~~---~g~~vl~iGDG-~NDv~mL~~AdVGIgi--sg~e~~qA~----~aSD~~i~~f~~ 924 (1185)
.|...++.+.+. ....|+||||+ .||+.|++.|++++.. .|....+.. ..+|+++.++.-
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 455666655443 34679999999 7999999999999643 343221122 368998877543
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=94.66 E-value=0.07 Score=56.03 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=33.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.+|+.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 57899999999999999999999997664 66677777763
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=94.24 E-value=0.081 Score=57.18 Aligned_cols=43 Identities=9% Similarity=0.113 Sum_probs=35.5
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchh----hHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQE----TAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~e----TAi~Ia~~~gll 773 (1185)
+.++-||+.+.++.|+++|+++.++||-... .+..-..+.||.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 5788999999999999999999999998653 555556667774
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=94.18 E-value=0.023 Score=62.00 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=41.7
Q ss_pred cHHHHHHHHHhh-CCCeEEEEcC----CcCChhhhhhcc-eeEEecCcchhHHhhcCceeec
Q 001023 865 QKAGIVALVKTR-TSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMSSDFAMG 920 (1185)
Q Consensus 865 qKa~iV~~lk~~-~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~e~~qA~~aSD~~i~ 920 (1185)
.|+.-++.+ .. ....|+++|| |.||.+||+.|+ +|++|..... ..+..||++..
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~~-~~k~~a~~v~~ 256 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQD-TVQRCREIFFP 256 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHH-HHHHHHHHHCT
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCCH-HHHHhhheeCC
Confidence 698888888 32 4568999999 999999999999 6999943322 26667777664
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.86 E-value=0.34 Score=53.78 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhC---CCeEEEEcCCc-CChhhhhhcceeEEe--cCcchhHH----------hhcCceeecchhhHHHHH
Q 001023 866 KAGIVALVKTRT---SDMTLAIGDGA-NDVSMIQMADVGVGI--SGQEGRQA----------VMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 866 Ka~iV~~lk~~~---g~~vl~iGDG~-NDv~mL~~AdVGIgi--sg~e~~qA----------~~aSD~~i~~f~~l~~ll 929 (1185)
|....+.+.+.. ...|+||||+. ||+.|.+.|++...+ .|...... ...+|+++.++.-+..++
T Consensus 217 ~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l 296 (306)
T 2oyc_A 217 SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGL 296 (306)
T ss_dssp STHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHH
Confidence 344555544433 35799999996 999999999998644 34321111 135899999888877665
Q ss_pred HHHhhH
Q 001023 930 LVHGHW 935 (1185)
Q Consensus 930 l~~Gr~ 935 (1185)
-..||.
T Consensus 297 ~~~~~~ 302 (306)
T 2oyc_A 297 EDEGHH 302 (306)
T ss_dssp ------
T ss_pred Hhhccc
Confidence 555554
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=93.84 E-value=0.74 Score=49.11 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=42.7
Q ss_pred cHHHHHHHHHhh---CCCeEEEEcCCc-CChhhhhhcceeE-Ee-cCcc-hhHH---hhcCceeecchhhHHHHH
Q 001023 865 QKAGIVALVKTR---TSDMTLAIGDGA-NDVSMIQMADVGV-GI-SGQE-GRQA---VMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 865 qKa~iV~~lk~~---~g~~vl~iGDG~-NDv~mL~~AdVGI-gi-sg~e-~~qA---~~aSD~~i~~f~~l~~ll 929 (1185)
-|....+.+.+. ....++||||+. ||+.|.+.|++-. ++ .|.. ..+. ...+|+++.++.-+..+|
T Consensus 180 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 180 PEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp TSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 345555555443 335799999998 9999999999764 55 3421 1111 245899998887776653
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=93.64 E-value=0.029 Score=59.39 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=29.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHH
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 767 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia 767 (1185)
++.+|+.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 3668999999999998 999999998888776555
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=93.56 E-value=0.14 Score=54.20 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=35.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 772 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gl 772 (1185)
-++.||+.++++.|++.| ++.++|+-....+..+....|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 478999999999999999 9999999888888888777776
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=93.36 E-value=0.016 Score=62.51 Aligned_cols=52 Identities=17% Similarity=0.208 Sum_probs=38.4
Q ss_pred cHHHHHHHHHhh-CCCeEEEEcC----CcCChhhhhhcce-eEEecCcchhHHhhcCcee
Q 001023 865 QKAGIVALVKTR-TSDMTLAIGD----GANDVSMIQMADV-GVGISGQEGRQAVMSSDFA 918 (1185)
Q Consensus 865 qKa~iV~~lk~~-~g~~vl~iGD----G~NDv~mL~~AdV-GIgisg~e~~qA~~aSD~~ 918 (1185)
.|+.-++.+ .. ....|+++|| |.||.+||+.|+. |+++...... .+..||++
T Consensus 188 ~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp SGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred chHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 688887777 32 4568999999 9999999999977 9999554332 66777765
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=93.04 E-value=0.12 Score=56.04 Aligned_cols=43 Identities=16% Similarity=0.085 Sum_probs=35.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchh----hHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQE----TAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~e----TAi~Ia~~~gll 773 (1185)
++++-||+.+.++.|+++|+++.++||-... .+..-....||.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 6789999999999999999999999997653 445555566774
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=92.96 E-value=0.12 Score=56.09 Aligned_cols=43 Identities=12% Similarity=0.162 Sum_probs=33.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhh---HHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQET---AISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eT---Ai~Ia~~~gll 773 (1185)
+.++-||+.++|+.|++.|+++.++||-.... +...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 45788999999999999999999999977433 33333555663
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=92.55 E-value=0.037 Score=56.39 Aligned_cols=42 Identities=21% Similarity=0.244 Sum_probs=34.6
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCC---------------chhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGD---------------KQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD---------------~~eTAi~Ia~~~gll 773 (1185)
-++.||+.++|+.|++.|+++.++|+- ..+.+..+....|+.
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 357899999999999999999999997 455666677777763
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=92.35 E-value=0.12 Score=57.20 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=28.9
Q ss_pred cccccCCChHHHHHHHHHcCCeEEEEcCCchhh
Q 001023 730 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQET 762 (1185)
Q Consensus 730 ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eT 762 (1185)
.++++.+|+.++++.|+++|+++.++||-....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 356789999999999999999999999987554
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=92.29 E-value=0.15 Score=57.26 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=38.3
Q ss_pred eecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001023 728 SGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 770 (1185)
Q Consensus 728 ~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~ 770 (1185)
..+...+.++..+.++.|+++|++|||+||=..+.+..+|...
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 138 DVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 3444578899999999999999999999999999999999875
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=89.82 E-value=1.4 Score=44.03 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=22.2
Q ss_pred CchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEE
Q 001023 642 GADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGM 682 (1185)
Q Consensus 642 Ga~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~ 682 (1185)
|....|.+.- -.........+.++..+|..++.+|.
T Consensus 118 Gn~~~m~~~g-----i~~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 118 GNREWLRRNG-----LTISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp ECHHHHHHHH-----CSSCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred cCHHHHHhcC-----CCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 8887764421 11122344556677788988888886
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=89.56 E-value=0.67 Score=49.38 Aligned_cols=41 Identities=22% Similarity=0.189 Sum_probs=32.1
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
..++.||+.++++.|++.|+++.++|+... +..+-...|+.
T Consensus 93 ~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 93 VNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred cccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 346789999999999999999999997543 44455666764
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=88.74 E-value=0.51 Score=51.10 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=32.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY 768 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~ 768 (1185)
-++.+|+.++++.|+++|+++.++|+-....+..+-.
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~ 165 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFG 165 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHH
Confidence 4788999999999999999999999988877666544
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=88.58 E-value=1.4 Score=47.36 Aligned_cols=43 Identities=7% Similarity=0.108 Sum_probs=34.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH----cCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS----SKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~----~gll 773 (1185)
.++.-+++.++++.|++.|+++.++||....+...++.. .|+.
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 344447888999999999999999999988777776664 7764
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=85.90 E-value=6.3 Score=42.17 Aligned_cols=42 Identities=26% Similarity=0.279 Sum_probs=34.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH---cCc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS---SKL 772 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~---~gl 772 (1185)
.+.+-+++.++|+.|+++|+++.++||....+...++.. +|+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 344458999999999999999999999988777776665 455
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=85.86 E-value=0.15 Score=53.55 Aligned_cols=30 Identities=13% Similarity=0.200 Sum_probs=25.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhH
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETA 763 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTA 763 (1185)
+.+++.++++.|+++|+++.++||-..+.+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~ 118 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKT 118 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHH
Confidence 467999999999999999999999875543
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=81.86 E-value=0.45 Score=52.56 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=27.1
Q ss_pred cccCCceeeccCcccccc---------cceeEEEEcCCCccccce
Q 001023 440 EASSSRFQCRALNINEDL---------GQIKYVFSDKTGTLTENK 475 (1185)
Q Consensus 440 ~~~~~~~~~r~~~~~E~L---------G~Vd~I~sDKTGTLT~n~ 475 (1185)
+-.+.++++|++..+|++ .+.. |+||||||||+..
T Consensus 15 ~l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~ 58 (297)
T 4fe3_A 15 EFQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFS 58 (297)
T ss_dssp GGTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSE
T ss_pred HHhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeec
Confidence 337788999999998873 2333 6789999999864
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=80.19 E-value=2.2 Score=49.59 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=24.4
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCc
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDK 759 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~ 759 (1185)
+-+|+.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999955
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1185 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 3e-16 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-14 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-11 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 3e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 3e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-04 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 8e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 77.2 bits (189), Expect = 3e-16
Identities = 36/226 (15%), Positives = 55/226 (24%), Gaps = 40/226 (17%)
Query: 525 QLSRSGKNTEEGKH--VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYA 582
++ ++ K G+ + + A CN +T K V + E AL
Sbjct: 34 EVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNET-----KGVYEKVGEATETALTTL 88
Query: 583 AAAYGFMLIERTSGHIVIDIQGQRQ---SRFNVLGLHEFDSDRKRMSVILGLPDKTVT-- 637
E + V EF DRK MSV +
Sbjct: 89 VEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAV 148
Query: 638 ---LFVKGADTSMFSVIAKAL-NMNVIRGTESHLH---------AYSSLGLRTLVVGMRE 684
+FVKGA + + T LR L + R+
Sbjct: 149 GNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD 208
Query: 685 LSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGI 730
E E +L +G G+
Sbjct: 209 TPPKREEMVLDDSSRFME---------------YETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 70.3 bits (171), Expect = 4e-14
Identities = 30/214 (14%), Positives = 56/214 (26%), Gaps = 38/214 (17%)
Query: 529 SGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGF 588
SG ++ + +A + +V D G E AL+
Sbjct: 23 SGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAG-DASESALLKCIELSC- 80
Query: 589 MLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLP--DKTVTLFVKGADTS 646
++ R R + F+S K I ++ L +KGA
Sbjct: 81 -----------GSVRKMRD-RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPER 128
Query: 647 MFSVIA--------KALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 698
+ + L+ + ++ LG R L L + +F +
Sbjct: 129 ILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK--- 185
Query: 699 AASNALFGRAALLRKVASSVENNLCILGASGIED 732
+ LC +G + D
Sbjct: 186 -----------FDTDELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 64.8 bits (157), Expect = 2e-11
Identities = 44/485 (9%), Positives = 107/485 (22%), Gaps = 153/485 (31%)
Query: 455 EDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPK 514
LG ++ + + R +
Sbjct: 34 CYLGLHSHIDWETLTDNDIQDI---------------RNRIFQK---------------- 62
Query: 515 LTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESP 574
D L +L G N+ +D + + + I ++
Sbjct: 63 -----DKILNKLKSLGLNSN-----WDMLFIVFSIHLI------------DILKKLSHDE 100
Query: 575 DEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDK 634
E + + T+ ++ + + + +
Sbjct: 101 IEAFMYQDEPVELKLQNISTNLADCFNL--------------NEQLPLQFLDNVKVGKNN 146
Query: 635 TVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQ 694
+ A T + ++ + + L + + +G + E + +
Sbjct: 147 IYAALEEFATTEL------HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIAR 200
Query: 695 SSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQ--GVPEAIESLRAAGIKV 752
++F+ G E L+ V + L+ AG ++
Sbjct: 201 TTFK--------------------------TGYIYQEIILRPVDEVKVLLNDLKGAGFEL 234
Query: 753 WVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812
+ TG + + LL I ++ A + K
Sbjct: 235 GIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP--------- 285
Query: 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVAL 872
+ + A + +
Sbjct: 286 ------------------------------NPFSYIAA-----LYGNNRDKYESYINKQD 310
Query: 873 VKTRTSDMTLAIGDGANDVSMIQMAD---VGV--GISGQEGRQAVMSS--DFAMGQFRFL 925
D +GD D+ Q +G G+ G++ + + D+ + L
Sbjct: 311 NIVNKDD-VFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGEL 369
Query: 926 VTLLL 930
+L
Sbjct: 370 RGVLD 374
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 49.4 bits (117), Expect = 3e-07
Identities = 33/200 (16%), Positives = 65/200 (32%), Gaps = 53/200 (26%)
Query: 725 LGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINS 784
+ D ++ V +I+ R AGI+V ++TGD + TAI+I ++ I
Sbjct: 12 TLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICR----------RIGIFG 61
Query: 785 NSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDE 844
++E + G + +E E
Sbjct: 62 ENEEVADR-----------------------------------AYTGREFDDLPLAEQRE 86
Query: 845 QLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS 904
+ V + ++ ++T GDG ND ++ A++G+ +
Sbjct: 87 ACRRACCFARVEPSHKSKIVEY-------LQSYDEITAMTGDGVNDAPALKKAEIGIAM- 138
Query: 905 GQEGRQAVMSSDFAMGQFRF 924
G A +S+ + F
Sbjct: 139 GSGTAVAKTASEMVLADDNF 158
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.4 bits (106), Expect = 1e-05
Identities = 25/175 (14%), Positives = 58/175 (33%), Gaps = 4/175 (2%)
Query: 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL---LTSKMTQVIINSNSK 787
+ + EAI + GI + ++TG+ + A + + ++ I +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 788 ESCRKSLEDAIAMSKKLKTVPGVSHN-SERSSGAGVAQLALIIDGTSLVYILDSELDEQL 846
E+ I ++ K P + + AG+ + I+ ++ I++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 847 FQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGV 901
+G V + + +GDG ND+ ++ V
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV 191
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 42.8 bits (100), Expect = 3e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 725 LGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQE 761
G D L++ A++ L+ GIKV ++TGD
Sbjct: 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 18/97 (18%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Query: 831 GTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND 890
+ + L + + I L + + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 891 VSMIQMADVGVGISGQEGRQAVM-SSDFAMGQFRFLV 926
+ AD +G G RQ V ++ + + F L+
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 216
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.3 bits (98), Expect = 1e-04
Identities = 31/178 (17%), Positives = 51/178 (28%), Gaps = 12/178 (6%)
Query: 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQET----AISIGYSSKLLTSKMTQVIINSN- 785
+ + E+I S G+ V +L+G+ I +G + + + N
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 786 -SKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDE 844
K + + K ++ + N R A ID + Y+
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWR-----EASTGFDIDPEDVDYVRKEAESR 132
Query: 845 QLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIGDGANDVSMIQMADVGV 901
S L R A D L IGD ND+ M Q+
Sbjct: 133 GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKA 190
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 40.1 bits (92), Expect = 8e-04
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 877 TSDMTLAIGDGANDVSMIQMADVGVGISG 905
TL +GDG ND ++++ D V + G
Sbjct: 202 KRPTTLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 38.5 bits (88), Expect = 0.003
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 879 DMTLAIGDGANDVSMIQMADVGV 901
+ A+GD ND M ++ D
Sbjct: 197 IESYAVGDSYNDFPMFEVVDKVF 219
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1185 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.95 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.91 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.82 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.78 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.26 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.23 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.87 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 98.68 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.64 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.59 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.59 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 98.44 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.41 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.37 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.35 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.25 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.19 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.18 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.12 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.04 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 97.9 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 97.66 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.32 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.16 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.16 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.0 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.88 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 96.85 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.75 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.68 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.53 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.38 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.13 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.01 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 95.98 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.62 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.52 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.42 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 94.9 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 93.42 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 93.23 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 93.08 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 92.97 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 92.85 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 92.74 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 91.19 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 91.05 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 87.87 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 86.33 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 84.99 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 84.87 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 84.82 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 81.44 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=8.2e-29 Score=251.26 Aligned_cols=147 Identities=26% Similarity=0.379 Sum_probs=122.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
||+|++++++|+.|+++||+|||+|||+.+||++||++|||+.++.++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v-------------------------------- 66 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV-------------------------------- 66 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCC--------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccc--------------------------------
Confidence 999999999999999999999999999999999999999998765421
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCCh
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 891 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv 891 (1185)
....++|..+......+..+.+.+. + ++||++|+||..+|+.+|+ .|++|+|+|||+||+
T Consensus 67 -------------~~~~~~~~~~~~~~~~~~~~~~~~~----~--v~ar~~p~~K~~lv~~l~~-~g~~Va~vGDG~nD~ 126 (168)
T d1wpga2 67 -------------ADRAYTGREFDDLPLAEQREACRRA----C--CFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDA 126 (168)
T ss_dssp -------------TTTEEEHHHHHHSCHHHHHHHHHHC----C--EEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGH
T ss_pred -------------ccccccccccchhhHHHHhhhhhhh----h--hhhccchhHHHHHHHHHHh-cccceeEEecCCCCH
Confidence 0115667777766665555554443 3 9999999999999999999 899999999999999
Q ss_pred hhhhhcceeEEec-CcchhHHhhcCceeecchhh--HHHHHHHHh
Q 001023 892 SMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHG 933 (1185)
Q Consensus 892 ~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f~~--l~~lll~~G 933 (1185)
+||++|||||++. |.+. |+++|||++.+.++ +..+ +.+|
T Consensus 127 ~AL~~AdvGIa~~~gt~~--a~~aAdivl~~~~l~~v~~~-I~~G 168 (168)
T d1wpga2 127 PALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAA-VEEG 168 (168)
T ss_dssp HHHHHSSEEEEETTSCHH--HHHTCSEEETTCCTHHHHHH-HHHH
T ss_pred HHHHhCCEEEEeccccHH--HHHhCCEEEccCCHHHHHHH-HHcC
Confidence 9999999999994 4444 88999999988444 5555 6665
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=8.5e-25 Score=212.55 Aligned_cols=118 Identities=27% Similarity=0.372 Sum_probs=100.2
Q ss_pred CcEEEEeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHh
Q 001023 721 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 800 (1185)
Q Consensus 721 dl~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~ 800 (1185)
|.+..+.++++|++|++++++|+.|+++||++||+|||+.+||.++|++|||-.
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~-------------------------- 62 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL-------------------------- 62 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE--------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh--------------------------
Confidence 445566899999999999999999999999999999999999999999999821
Q ss_pred hcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCe
Q 001023 801 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 880 (1185)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~ 880 (1185)
++++++|++|..+|+.+|. +++
T Consensus 63 --------------------------------------------------------v~~~~~p~~k~~~v~~~q~--~~~ 84 (135)
T d2b8ea1 63 --------------------------------------------------------VIAEVLPHQKSEEVKKLQA--KEV 84 (135)
T ss_dssp --------------------------------------------------------EECSCCHHHHHHHHHHHTT--TSC
T ss_pred --------------------------------------------------------hccccchhHHHHHHHHHHc--CCE
Confidence 9999999999999999986 579
Q ss_pred EEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceeecchhh
Q 001023 881 TLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQFRF 924 (1185)
Q Consensus 881 vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~f~~ 924 (1185)
|+|+|||.||++||++|||||++.+ .+. +..+||+++.+.++
T Consensus 85 v~~vGDg~nD~~aL~~Advgia~~~~~~~--~~~aADivl~~~~l 127 (135)
T d2b8ea1 85 VAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDL 127 (135)
T ss_dssp EEEEECSSSSHHHHHHSSEEEEECCC----------SEEESSCCT
T ss_pred EEEEeCCCCcHHHHHhCCeeeecCccCHH--HHHhCCEEEECCCH
Confidence 9999999999999999999999944 443 88999999987544
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.88 E-value=4.5e-24 Score=226.62 Aligned_cols=172 Identities=16% Similarity=0.122 Sum_probs=125.0
Q ss_pred cchhHHHHHHHHHhhcccccccccCCCCCCc--ceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEE
Q 001023 535 EGKHVYDFFLALAACNTIVPLVVDTSDPNVK--LVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNV 612 (1185)
Q Consensus 535 ~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~--~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~i 612 (1185)
.+.....+++++++||++.. +.+.+.. .-....++|.|.||+.+|...|..... .+. .|++
T Consensus 30 ~~~~~~~l~~~~~lcn~a~~----~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~~~~~~------------~r~-~~~~ 92 (214)
T d1q3ia_ 30 RSPTWTALSRIAGLCNRAVF----KAGQENISVSKRDTAGDASESALLKCIELSCGSVRK------------MRD-RNPK 92 (214)
T ss_dssp CSHHHHHHHHHHHHSCCCCC----C----------CCCCSCHHHHHHHHHHHHHHSCHHH------------HHH-TSCE
T ss_pred CCHHHHHHHHHHHHhCCCcc----ccCCCCCcccccccccChHHHHHHHHHHHhCCCHHH------------HHh-hCcE
Confidence 44566778999999999876 2221110 001135799999999999987764321 224 7889
Q ss_pred EEeecCCCCCceEEEEEecC--CCcEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHHhhcCCeEEEEEE
Q 001023 613 LGLHEFDSDRKRMSVILGLP--DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGM 682 (1185)
Q Consensus 613 l~~~~F~s~rkrmsviv~~~--~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtl~~A~ 682 (1185)
+..+||+|+||||+++++.+ ++.+++|+|||||.|+++|+... +++.++.+.+.+++|+.+|+|||++||
T Consensus 93 v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~ 172 (214)
T d1q3ia_ 93 VAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQ 172 (214)
T ss_dssp EEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred eeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEEEEEE
Confidence 99999999999999999976 46789999999999999997532 456788999999999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCCC
Q 001023 683 RELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQG 737 (1185)
Q Consensus 683 r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~~ 737 (1185)
|+++.+++..|... +.+ ..+.+|+||+|+|++||+||+|+.
T Consensus 173 k~l~~~~~~~~~~~---------~~~-----~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 173 LNLPSGKFPRGFKF---------DTD-----ELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEECTTTSCTTCCC---------CTT-----TTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EecCcccccccccc---------Chh-----hhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99998776544210 000 124668999999999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=3.1e-28 Score=282.08 Aligned_cols=331 Identities=12% Similarity=0.054 Sum_probs=217.3
Q ss_pred cccccceeEEEEcCCCccccceeEEEEEEEeceecCCCCCCCcccccccccccCCcccCCCcccccChhHHHhhh-cCCC
Q 001023 454 NEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSR-SGKN 532 (1185)
Q Consensus 454 ~E~LG~Vd~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~-~~~~ 532 (1185)
.|.||...++|+|||||+|.|.|....+. +..++..+. .+.+
T Consensus 33 ~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-------------------------------------~~~il~~~k~~g~n 75 (380)
T d1qyia_ 33 KCYLGLHSHIDWETLTDNDIQDIRNRIFQ-------------------------------------KDKILNKLKSLGLN 75 (380)
T ss_dssp TTTTCCSCCCCGGGCCHHHHHHHHHHHHT-------------------------------------TTHHHHHHHHTTCC
T ss_pred hhhcccceeeecCcccchhhhhheeeeec-------------------------------------chhhhHhhhhcCCC
Confidence 47899999999999999999999663211 222232211 1111
Q ss_pred CccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEE
Q 001023 533 TEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNV 612 (1185)
Q Consensus 533 ~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~i 612 (1185)
. -.++....++||.+.... ..+.|++.+++..++..+..+.. ..+ .|..
T Consensus 76 ~-----~~dl~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~------------~~~-~~~~ 124 (380)
T d1qyia_ 76 S-----NWDMLFIVFSIHLIDILK-------------KLSHDEIEAFMYQDEPVELKLQN------------IST-NLAD 124 (380)
T ss_dssp C-----HHHHHHHHHHHHHHHHHT-------------TSCHHHHHHHHHCSSCHHHHHTT------------SGG-GCSS
T ss_pred h-----hHHHHHHHHHHHHHHHHh-------------hcCCCcHHHHHHHHhhccchHHH------------HHH-hccc
Confidence 1 124556677788664310 13467788877654432211110 112 4555
Q ss_pred EEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHHHHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHH
Q 001023 613 LGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQ 692 (1185)
Q Consensus 613 l~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~ 692 (1185)
...+||++.+|+|++.....++.+.++.||+++.+.. .+.....+...+.+++.+|+|+|++|++..+..+
T Consensus 125 ~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~------~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~--- 195 (380)
T d1qyia_ 125 CFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV------SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE--- 195 (380)
T ss_dssp CCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC------SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred cccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC------cHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc---
Confidence 6678999999999988776556566666777765421 2233455677888999999999998875432221
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeecccccCC--ChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001023 693 WQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQ--GVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 770 (1185)
Q Consensus 693 ~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ieD~lr~--~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~ 770 (1185)
.....+....|.++.+|+++| |++++|+.|+++||+++|+|||+..+|..+++++
T Consensus 196 -----------------------~~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~l 252 (380)
T d1qyia_ 196 -----------------------KKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENL 252 (380)
T ss_dssp -----------------------CSCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH
T ss_pred -----------------------cccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHc
Confidence 233445667899999999776 9999999999999999999999999999999999
Q ss_pred CccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHh
Q 001023 771 KLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLA 850 (1185)
Q Consensus 771 gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 850 (1185)
||...-....+++..+. . ........ .....+ .....+...+
T Consensus 253 gl~~~F~~~~i~~~~d~---~----~~~~~~~~------~~~~~K-------------------------P~p~~~~~~~ 294 (380)
T d1qyia_ 253 GLLPYFEADFIATASDV---L----EAENMYPQ------ARPLGK-------------------------PNPFSYIAAL 294 (380)
T ss_dssp TCGGGSCGGGEECHHHH---H----HHHHHSTT------SCCCCT-------------------------TSTHHHHHHH
T ss_pred CCcccCCcceEEecchh---h----hhhhhccc------cccccC-------------------------CChHHHHHHH
Confidence 99752211111111100 0 00000000 000000 0012222222
Q ss_pred ccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcc---eeEEe--cCcchhH--HhhcCceeecchh
Q 001023 851 GTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMAD---VGVGI--SGQEGRQ--AVMSSDFAMGQFR 923 (1185)
Q Consensus 851 ~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~Ad---VGIgi--sg~e~~q--A~~aSD~~i~~f~ 923 (1185)
.++|++|.||..+++.++. .++.|+|||||.||++|+++|| |||++ +|.++.+ +...||+++.++.
T Consensus 295 ------~~~~~~~~~k~~iv~~~~~-~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~ 367 (380)
T d1qyia_ 295 ------YGNNRDKYESYINKQDNIV-NKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLG 367 (380)
T ss_dssp ------HCCCGGGHHHHHHCCTTCS-CTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGG
T ss_pred ------HHcCCCHHHHHHHHHHhCC-CCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHH
Confidence 6889999999999999998 8999999999999999999999 89854 5555422 2347999999998
Q ss_pred hHHHHH
Q 001023 924 FLVTLL 929 (1185)
Q Consensus 924 ~l~~ll 929 (1185)
.+.++|
T Consensus 368 el~~il 373 (380)
T d1qyia_ 368 ELRGVL 373 (380)
T ss_dssp GHHHHH
T ss_pred HHHHHH
Confidence 887774
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.82 E-value=2.5e-21 Score=208.89 Aligned_cols=176 Identities=19% Similarity=0.123 Sum_probs=126.8
Q ss_pred ccchhHHHHHHHHHhhcccccccccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEEecCCeEE----EEecCceeee
Q 001023 534 EEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIV----IDIQGQRQSR 609 (1185)
Q Consensus 534 ~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sp~e~alv~~a~~~g~~~~~r~~~~~~----i~~~g~~~~~ 609 (1185)
.....+++++.++++||++.. ..++..+. ....++|+|.||+.+|.+.|+........... ......+. .
T Consensus 45 ~~~~~l~~ll~~~~LCn~a~l----~~~~~~~~-~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~-~ 118 (239)
T d1wpga3 45 GQFDGLVELATICALCNDSSL----DFNETKGV-YEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQ-L 118 (239)
T ss_dssp GGCHHHHHHHHHHHHSCSCEE----EEETTTTE-EEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHH-H
T ss_pred cccHHHHHHHHHHHhcCCCEe----eecCCCCe-EEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhh-h
Confidence 345567889999999999876 33333333 34557999999999999999865432110000 00001124 7
Q ss_pred EEEEEeecCCCCCceEEEEEecCCC-----cEEEEEcCchhHHHHHHHhhc--------chhhHHHHHHHHHHH--hhcC
Q 001023 610 FNVLGLHEFDSDRKRMSVILGLPDK-----TVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAY--SSLG 674 (1185)
Q Consensus 610 ~~il~~~~F~s~rkrmsviv~~~~~-----~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~--a~~G 674 (1185)
|+++..+||+|+||||||+++.+++ .+++|+|||||.|+++|+... +++.++.+.+.+++| +++|
T Consensus 119 ~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~g 198 (239)
T d1wpga3 119 MKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDT 198 (239)
T ss_dssp EEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCC
T ss_pred CeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCC
Confidence 9999999999999999999998765 378999999999999997532 456677788888876 6799
Q ss_pred CeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeeec
Q 001023 675 LRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGI 730 (1185)
Q Consensus 675 lRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~i 730 (1185)
+|||++|||.++.++...+.+ +. ...+.+|+||+|+|++||
T Consensus 199 lRvLa~A~k~~~~~~~~~~~~----------~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 199 LRCLALATRDTPPKREEMVLD----------DS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp CEEEEEEEESSCCCGGGCCTT----------CG-----GGHHHHTCSEEEEEEEEE
T ss_pred CEEEEEEEEECCccccccccc----------ch-----hhHHHhcCCCEEEEEECC
Confidence 999999999998654322111 10 012568999999999986
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.78 E-value=1e-19 Score=170.40 Aligned_cols=106 Identities=22% Similarity=0.334 Sum_probs=87.9
Q ss_pred eEEEEeCCeE--EEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCceeecccccccccCcccc
Q 001023 178 LANVLVNNQF--QEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKE 255 (1185)
Q Consensus 178 ~~~V~r~g~~--~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~~K~~~~~~~~~~~~~~ 255 (1185)
+++|+|+|++ ++|++++|+|||||.|++|+.+|||++||.... +.++||||+|||||.|+.|.+.+...
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~--~~l~vdes~lTGEs~pv~K~~~~~~~------- 72 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGESVSVIKHTEPVPD------- 72 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCCEEECHHHHSCCSCEECCCSCCCC-------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeec--cceEEEEeecccceEEEEeecccccc-------
Confidence 6899999874 789999999999999999999999999997543 44899999999999999998754431
Q ss_pred cceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhh
Q 001023 256 TISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVM 318 (1185)
Q Consensus 256 ~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~ 318 (1185)
+.....+..|++|+||.+.+ |.++++|++||.+|.+.
T Consensus 73 -------------------------~~~~~~~~~n~lf~GT~V~~-G~~~~~V~~tG~~T~~G 109 (115)
T d1wpga1 73 -------------------------PRAVNQDKKNMLFSGTNIAA-GKALGIVATTGVSTEIG 109 (115)
T ss_dssp -------------------------TTCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGSHHH
T ss_pred -------------------------cccccccccceEEeccEEEe-eeEEEEEEEEccccHHH
Confidence 12223446788888888876 78999999999999654
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.26 E-value=1.8e-11 Score=144.17 Aligned_cols=207 Identities=16% Similarity=0.139 Sum_probs=153.2
Q ss_pred HhhHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhHHHHHHHHHHhhhHHHHHhhhccccCChHHHhcCCcc
Q 001023 932 HGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQL 1011 (1185)
Q Consensus 932 ~Gr~~~~ri~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~l~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~l 1011 (1185)
.||..|.++.+.+.|.+..|+..++..+++.++. .++++++.|++|.|++++.+|+++++.. ++++.+|+.|+
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l~---~p~pl~~~qILwinli~d~lpaiaL~~e---p~d~~iM~~~P- 299 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG---LPEALIPVQLLWVNLVTDGLPATALGFN---PPDLDIMDRPP- 299 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCSCCHHHHHHHHHTTTHHHHHHHTTC---CCCSGGGGSCC-
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHcC---CCccccHHHHHHHHHHhHHHHHHHHhcC---CCchhhhcCCC-
Confidence 4999999999999999999999999888887765 5679999999999999999999999974 34445555544
Q ss_pred cccccCCcccchhHHHHHHHhHHHHHhhheeecccc----ccC--------------------------CcccchhhhHH
Q 001023 1012 YGAGHRQECYNTKLFWLTMADTLWQSVVIFFIPFGA----YWD--------------------------STIDVSSIGDL 1061 (1185)
Q Consensus 1012 y~~~~~~~~~~~~~~~~~~~~~~~~~~vif~~~~~~----~~g--------------------------~~~~~~~~~~~ 1061 (1185)
+.+++.+++.+.+..++..|++.+++.+.++++. ..+ .........++
T Consensus 300 --r~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~ 377 (472)
T d1wpga4 300 --RSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTM 377 (472)
T ss_dssp --CCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHH
T ss_pred --CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHH
Confidence 2678889999999988888888877664441110 000 00111223566
Q ss_pred HHHHHHHHHHHHHHHhhcc--c-----hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhhCHHHHHHHHHHHHH
Q 001023 1062 WTLAVVILVNIHLAMDVIR--W-----TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVA 1134 (1185)
Q Consensus 1062 ~~~~~v~~~~~~~~l~~~~--~-----~~~~~~~i~~si~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~wl~~llv~~~ 1134 (1185)
.|+++++..-+. ++..++ . .++.+.++++++++.+++++++.++|.++. +|.....++..|+.++...++
T Consensus 378 ~F~~lv~~q~~~-~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~~--vf~~~pL~~~~w~i~l~~~~~ 454 (472)
T d1wpga4 378 ALSVLVTIEMCN-ALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPM--IFKLKALDLTQWLMVLKISLP 454 (472)
T ss_dssp HHHHHHHHHHHH-HHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTHH--HHTCCCCCHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHH-HHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHHH--HHcccCCCHHHHHHHHHHHHH
Confidence 677776665444 443333 1 234567788888877777777788887766 355566789999999999999
Q ss_pred HHHHHHHHHHHHHhhC
Q 001023 1135 ALIPRFLVKFLYQYYY 1150 (1185)
Q Consensus 1135 ~~l~~~~~k~~~r~f~ 1150 (1185)
.++..++.|++.|+|.
T Consensus 455 ~~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 455 VIGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHhhcCC
Confidence 9999999999988764
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.23 E-value=1.5e-12 Score=153.62 Aligned_cols=218 Identities=14% Similarity=0.107 Sum_probs=150.7
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc-----ccCccchhhhHHHHHHHHHHH
Q 001023 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA-----VFGRGVSILPLAFVLSVTAIK 159 (1185)
Q Consensus 85 ~~~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~-----~~~~~~~~~~l~~vi~~s~i~ 159 (1185)
+.++|+++||+|+++..+...++ +.+++||+++.++.++++++++++.+.. ....+...+.+++++++++..
T Consensus 28 ea~~r~~~~G~N~l~~~~~~s~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i 104 (472)
T d1wpga4 28 QVKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIV 104 (472)
T ss_dssp HHHHHHHHSCCSSCCCCCCCCHH---HHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCCCCCCCCHH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcccccchhHhHhhhhhheeeeeeeE
Confidence 34458899999999998876654 8899999999999999999999864221 112456677788888899999
Q ss_pred HHHHHHHHhhhhHHhhcceEEEEeCCeEEEEeeeccccccEEEEcCCCccCCceeEeeccCCCCcEEEEeccCCCCCCce
Q 001023 160 DAYEDYRRHRSDRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239 (1185)
Q Consensus 160 ~~~ed~~r~k~d~~~n~~~~~V~r~g~~~~i~~~~l~vGDIV~l~~ge~iPaD~ilL~ss~~~G~~~Vdts~LtGEs~~~ 239 (1185)
..++|+|..++....++.... ...||.
T Consensus 105 ~~~qe~~a~~~~~~l~~~~~~----------------------~~~~~~------------------------------- 131 (472)
T d1wpga4 105 GVWQERNAENAIEALKEYEPA----------------------ATEQDK------------------------------- 131 (472)
T ss_dssp HHHHHHSCCCHHHHHGGGSCC----------------------CCCCCC-------------------------------
T ss_pred EeEEechHHHHHHHHhhhccc----------------------cccccC-------------------------------
Confidence 999998887776555432000 012333
Q ss_pred eecccccccccCcccccceeEEEecCCCCCceeeEEEEEEcCeeeecCCCceEeecceeecCCeEEEEEEEecccchhhh
Q 001023 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML 319 (1185)
Q Consensus 240 ~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~~~~f~Gt~~~~g~~~~l~~~nil~rgs~l~nt~~i~gvVv~tG~~Tki~~ 319 (1185)
T Consensus 132 -------------------------------------------------------------------------------- 131 (472)
T d1wpga4 132 -------------------------------------------------------------------------------- 131 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcccccchhhHHH
Q 001023 320 NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEILF 399 (1185)
Q Consensus 320 n~~~~~~k~s~le~~~~~~~~~l~~~~l~~~~i~~i~~~~~~~~~~~~~~~~~wyl~~~~~~~~~~~~~~~~~~~~~~~~ 399 (1185)
+|.++++++....+.....+++..+............. ...| ......
T Consensus 132 ---------~P~d~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------~~~~~~ 179 (472)
T d1wpga4 132 ---------TPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH---GGSW--------------------IRGAIY 179 (472)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCS---SSCS--------------------SSCGGG
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhh--------------------HHHHHH
Confidence 34444444444443333333333332222111100000 0111 222344
Q ss_pred HHHHHHHHhhccccchhHHHHHHHHHHHHHHhhccccccccccCCceeeccCcccccccceeEEEEcCC--CccccceeE
Q 001023 400 TFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKT--GTLTENKME 477 (1185)
Q Consensus 400 ~~~~~i~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~Vd~I~sDKT--GTLT~n~m~ 477 (1185)
.+..++.+.+.++|++||+++.++..+++.+| ++++++||+...+|+||+..++|+||| +|||.|.++
T Consensus 180 ~~~~ai~l~V~~iPEgLp~~vti~La~~~~rm----------ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~ 249 (472)
T d1wpga4 180 YFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGE 249 (472)
T ss_dssp HHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhhHHHHHHHHHHHHHHHH----------HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHH
Confidence 67788999999999999999999999988776 899999999999999999999999998 999999887
Q ss_pred EEE
Q 001023 478 FRC 480 (1185)
Q Consensus 478 ~~~ 480 (1185)
+..
T Consensus 250 v~~ 252 (472)
T d1wpga4 250 VVC 252 (472)
T ss_dssp HHH
T ss_pred HHH
Confidence 743
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=2.2e-09 Score=112.63 Aligned_cols=132 Identities=18% Similarity=0.280 Sum_probs=94.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
+++||+.++|+.|++.|++++++||.....+..++..+|+-..+ ++.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~a------------------------------- 128 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFA------------------------------- 128 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEE-------------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eee-------------------------------
Confidence 57899999999999999999999999999999999999984321 100
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh-CCCeEEEEcCCcCCh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIGDGANDV 891 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~-~g~~vl~iGDG~NDv 891 (1185)
..+....+|.-..... .-.-..+..|+.+++.+++. .-..++|+|||.||+
T Consensus 129 ----------n~~~~~~~G~~~g~~~------------------~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di 180 (217)
T d1nnla_ 129 ----------NRLKFYFNGEYAGFDE------------------TQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180 (217)
T ss_dssp ----------ECEEECTTSCEEEECT------------------TSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHH
T ss_pred ----------eeeeeeehhcccccee------------------eeeeeccchHHHHHHHHHhccCccccEEEEeCHhhH
Confidence 0000011111100000 00113467899999999864 335799999999999
Q ss_pred hhhhhcceeEEecCcch-hHHhhcCceeecchhhH
Q 001023 892 SMIQMADVGVGISGQEG-RQAVMSSDFAMGQFRFL 925 (1185)
Q Consensus 892 ~mL~~AdVGIgisg~e~-~qA~~aSD~~i~~f~~l 925 (1185)
+|+++|++||++.+... .+....+|.++.+|..|
T Consensus 181 ~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp TTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred HHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 99999999999965433 33567799999988754
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=98.68 E-value=1.7e-08 Score=105.82 Aligned_cols=175 Identities=13% Similarity=0.115 Sum_probs=96.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCC----CceEEEEeC-----CCHHHHHHHHHHHHHhhcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQVIINS-----NSKESCRKSLEDAIAMSKK 803 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~----~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~ 803 (1185)
.+.+.+.++|++|+++|++++++||.....+...+...++-.. +...+.... ............ .....
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 96 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNE-IRKRF- 96 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHH-HHHHC-
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHH-HHHhc-
Confidence 5778899999999999999999999999999999988877421 111111110 011111111111 11110
Q ss_pred cccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCC-----eeEEEecCcccHHHHHHHHHhh--
Q 001023 804 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCS-----VVLCCRVAPLQKAGIVALVKTR-- 876 (1185)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~-----~vi~~r~sP~qKa~iV~~lk~~-- 876 (1185)
......... ......+.+....... +..++...++-.... -.+-.......|...++.+.+.
T Consensus 97 ---~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~ 165 (230)
T d1wr8a_ 97 ---PNARTSYTM-----PDRRAGLVIMRETINV---ETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLG 165 (230)
T ss_dssp ---TTCCBCTTG-----GGCSSCEEECTTTSCH---HHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHT
T ss_pred ---ccccceeec-----ccceeeEEEecccccH---HHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccc
Confidence 000000000 0111122222221111 111222222211111 0111223345899999887664
Q ss_pred -CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 877 -TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 877 -~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
....|+++|||.||.+|++.|++||+|...... ++.+||+++..
T Consensus 166 i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~-~k~~A~~v~~~ 210 (230)
T d1wr8a_ 166 IKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKI-LKENADYVTKK 210 (230)
T ss_dssp SCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHTTCSEECSS
T ss_pred cchhheeeeecCccHHHHHHHCCeEEEECCCCHH-HHHhCCEEECC
Confidence 346799999999999999999999999544332 78899999865
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=1.2e-07 Score=102.12 Aligned_cols=189 Identities=17% Similarity=0.165 Sum_probs=105.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCC----------------CHHHHHHHHH
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN----------------SKESCRKSLE 795 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~----------------~~~~~~~~~~ 795 (1185)
-++.+.+.++|++|+++||+++++||.+...+..+..++++..+....+..++. +.+..+...+
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~ 99 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEK 99 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHH
Confidence 347788999999999999999999999999999999999987654433222211 2222222222
Q ss_pred HHHHhhcccccCCCCC------Ccc-------------------cCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHh
Q 001023 796 DAIAMSKKLKTVPGVS------HNS-------------------ERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLA 850 (1185)
Q Consensus 796 ~~~~~~~~~~~~~~~~------~~~-------------------~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~ 850 (1185)
................ ... ............+.++......-....+.+.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 179 (271)
T d1rkqa_ 100 LSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKY 179 (271)
T ss_dssp HHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHE
T ss_pred HHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcce
Confidence 2222111100000000 000 000000112233444433332211122222222211
Q ss_pred ccC-CeeEEEecCcc--cHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 851 GTC-SVVLCCRVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 851 ~~~-~~vi~~r~sP~--qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
... ..--+...+|. .|+..++.+.+. ....|+++|||.||.+|++.|+.||+|..... ..+..||++...
T Consensus 180 ~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~-~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 180 TVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 255 (271)
T ss_dssp EEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCCCH-HHHHhCCEEcCC
Confidence 100 00012334555 699999988775 33569999999999999999999999954332 277889998764
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.59 E-value=7.8e-08 Score=96.54 Aligned_cols=113 Identities=19% Similarity=0.172 Sum_probs=85.1
Q ss_pred HHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCCcccCCCC
Q 001023 740 EAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSG 819 (1185)
Q Consensus 740 e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1185)
..|+.|+..|+.+.++||+....+...+.+.++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 47999999999999999999999999999888732
Q ss_pred cCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhh
Q 001023 820 AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQM 896 (1185)
Q Consensus 820 ~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~ 896 (1185)
+......|...++.+.+. ....|+++|||.||.+||+.
T Consensus 74 ---------------------------------------~~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~ 114 (177)
T d1k1ea_ 74 ---------------------------------------FFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAA 114 (177)
T ss_dssp ---------------------------------------EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH
T ss_pred ---------------------------------------cccccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhh
Confidence 111234555555544432 44789999999999999999
Q ss_pred cceeEEecCcchhHHhhcCceeecc------hhhHH-HHHHHHhhHHH
Q 001023 897 ADVGVGISGQEGRQAVMSSDFAMGQ------FRFLV-TLLLVHGHWNY 937 (1185)
Q Consensus 897 AdVGIgisg~e~~qA~~aSD~~i~~------f~~l~-~lll~~Gr~~~ 937 (1185)
|++|+++..+... ++.+||++... .+-+. .+|-.+|+|.+
T Consensus 115 ~g~siap~nA~~~-vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 115 CGTSFAVADAPIY-VKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp SSEEEECTTSCHH-HHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred CCeEEEcCCccHH-HHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 9999999655433 88999999965 44444 44445788755
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.59 E-value=1.1e-07 Score=99.72 Aligned_cols=168 Identities=20% Similarity=0.176 Sum_probs=98.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEE------EeCC-------CHHHHHHHHHHH
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVI------INSN-------SKESCRKSLEDA 797 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~------i~~~-------~~~~~~~~~~~~ 797 (1185)
+.++.+++.+++++|++.|+++++.||.....+..++...|+-. ..+. .+.. ..+.....++..
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEM 94 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCEEESSCSHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccEEEecChHHHHHHHHHH
Confidence 45678899999999999999999999999998888888887633 1211 1111 112222222211
Q ss_pred HHhhcccccCCCCCCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeE-----EEecCcc--cHHHHH
Q 001023 798 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL-----CCRVAPL--QKAGIV 870 (1185)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi-----~~r~sP~--qKa~iV 870 (1185)
......... .... ......+..++...+. ............+ ++...|. .|+..+
T Consensus 95 ~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai 156 (225)
T d1l6ra_ 95 SKRTSMRSI------LTNR---WREASTGFDIDPEDVD---------YVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAV 156 (225)
T ss_dssp TTTSSCBCC------GGGG---GCSSSEEEBCCGGGHH---------HHHHHHHTTTEEEEEETTEEEEEETTCSHHHHH
T ss_pred HHhcCccee------eccc---ceeeeeccccCHHHHH---------HHHHHHhhcCcEEEECCcEEEecCCccchHHHH
Confidence 111100000 0000 0011222222222222 1112222222222 3344453 899999
Q ss_pred HHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceeecc
Q 001023 871 ALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 871 ~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~ 921 (1185)
+.+.+. ....|+++|||.||.+|++.|++||++++ .+. ++.+||++...
T Consensus 157 ~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~--~k~~ad~v~~~ 209 (225)
T d1l6ra_ 157 NKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDN--IKAVSDFVSDY 209 (225)
T ss_dssp HHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHH--HHHHCSEECSC
T ss_pred HHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCCcHH--HHHhCCEEECC
Confidence 877654 33569999999999999999999999954 444 78899998755
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=98.44 E-value=4e-07 Score=98.59 Aligned_cols=61 Identities=23% Similarity=0.289 Sum_probs=50.0
Q ss_pred EecCcc--cHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc
Q 001023 859 CRVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~ 921 (1185)
..++|. .|+.-++.+.+..| ..|+++|||.||.+||+.|+.||+|. +.+. ++..||++...
T Consensus 205 ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~--~k~~A~~v~~~ 271 (285)
T d1nrwa_ 205 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARED--IKSIADAVTLT 271 (285)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHH--HHHHCSEECCC
T ss_pred EEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCCCHH--HHHhCCEEcCC
Confidence 345665 89999999987643 57999999999999999999999994 4443 78899998864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.41 E-value=3.4e-07 Score=95.65 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=92.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.+.++.|++.|+++.++||-..+.+..+....|+... .+.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~a------------------------------- 120 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYC------------------------------- 120 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEE-------------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eee-------------------------------
Confidence 4789999999999999999999999999999999988877431 100
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
..+.+++........ ......+++.+|..|..+++.++. .+..|++|||+.||.+
T Consensus 121 ------------n~~~~~~~~~~~~~~------------~~~~~~~~~~k~~~~~~~~~~~~~-~~~~~i~iGDs~~Dl~ 175 (226)
T d2feaa1 121 ------------NHASFDNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTDVE 175 (226)
T ss_dssp ------------EEEECSSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGGHH
T ss_pred ------------eeEEEeCCcceeccc------------cccccccccCCHHHHHHHHHHhcC-CCceEEEEeCchhhHH
Confidence 001111111100000 000114556789999999999887 7889999999999999
Q ss_pred hhhhcceeEEecC-cchhHHhhcCceeecchhhHHHH
Q 001023 893 MIQMADVGVGISG-QEGRQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 893 mL~~AdVGIgisg-~e~~qA~~aSD~~i~~f~~l~~l 928 (1185)
|+++||+++++.+ .+-.+....+...+.+|+-+...
T Consensus 176 ~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 176 AAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp HHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHH
T ss_pred HHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHH
Confidence 9999999998843 22211112223445667766554
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.37 E-value=6.4e-07 Score=96.17 Aligned_cols=182 Identities=18% Similarity=0.158 Sum_probs=101.5
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC----CCc-------eEEEEeCCCHHHHHHHHHHHHHhhcc
Q 001023 735 QQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SKM-------TQVIINSNSKESCRKSLEDAIAMSKK 803 (1185)
Q Consensus 735 r~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~----~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~ 803 (1185)
.+.+.++|++|+++|++++++||.....+..+..++++.. .+. +.+.......++....+.........
T Consensus 22 ~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 101 (269)
T d1rlma_ 22 QPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL 101 (269)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTTC
T ss_pred hHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcCc
Confidence 3568899999999999999999999999988887777532 111 11222222344454444444332211
Q ss_pred cccCCCCC--CcccCC---------------------CCcCcCcEEEEEcCchhhhhccHHHHHHHHH-HhccCCee---
Q 001023 804 LKTVPGVS--HNSERS---------------------SGAGVAQLALIIDGTSLVYILDSELDEQLFQ-LAGTCSVV--- 856 (1185)
Q Consensus 804 ~~~~~~~~--~~~~~~---------------------~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~-l~~~~~~v--- 856 (1185)
.....+.. .+.... ......-+.+.+....- .+ ....+++.. ....+..+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~ 178 (269)
T d1rlma_ 102 NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDE--QI-PLVIDKLHVALDGIMKPVTSG 178 (269)
T ss_dssp EEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGG--GH-HHHHHHHHHHTTTSSEEEECS
T ss_pred eEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHH--HH-HHHHHHHHHHhhcceEEEEEc
Confidence 10000000 000000 00001112222222210 01 112222221 11112111
Q ss_pred -EEEecCcc--cHHHHHHHHHhhC---CCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc
Q 001023 857 -LCCRVAPL--QKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 857 -i~~r~sP~--qKa~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~ 921 (1185)
-+..++|. .|+.-++.+.+.. ...|+++|||.||.+||+.|+.||+|. +.+. .+..||++...
T Consensus 179 ~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~--lk~~A~~v~~~ 248 (269)
T d1rlma_ 179 FGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAEN--IKQIARYATDD 248 (269)
T ss_dssp TTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHH--HHHHCSEECCC
T ss_pred CceEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCCCHH--HHHhCCEEcCC
Confidence 13466675 5999999987653 356999999999999999999999995 4443 78899999875
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.35 E-value=2e-06 Score=87.61 Aligned_cols=129 Identities=22% Similarity=0.149 Sum_probs=88.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
+..++....++.++ .+.++..+||.-.......+...++..........
T Consensus 69 ~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~------------------------------ 117 (206)
T d1rkua_ 69 KPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEI------------------------------ 117 (206)
T ss_dssp CCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEE------------------------------
T ss_pred cccchHHHHHHHhh-cCceEEEeccCchHHHHHHHHHhCCchhhcceeee------------------------------
Confidence 55677777777764 68999999999998888888887775322111111
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCChh
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 892 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~NDv~ 892 (1185)
... +.....-...+.-+..+++.++. ....|+|||||.||++
T Consensus 118 -----------------~~~--------------------~~~~~~~~~~~~~~~~~~~~~~i-~~~eviaiGDg~NDi~ 159 (206)
T d1rkua_ 118 -----------------DDS--------------------DRVVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYNDTT 159 (206)
T ss_dssp -----------------CTT--------------------SCEEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTTHH
T ss_pred -----------------ecc--------------------cccccccccchhhHHHHHHHhcc-cccceEEecCCccCHH
Confidence 100 00113333444555566666666 7889999999999999
Q ss_pred hhhhcceeEEecCcchhHHhhcCceee-cchhhHHHHHHH
Q 001023 893 MIQMADVGVGISGQEGRQAVMSSDFAM-GQFRFLVTLLLV 931 (1185)
Q Consensus 893 mL~~AdVGIgisg~e~~qA~~aSD~~i-~~f~~l~~lll~ 931 (1185)
||+.|++||||...+.. ...++||+. .++.-+...++.
T Consensus 160 Ml~~Ag~gIAmna~~~v-~~~~~~~~~~~~~~d~~~~~~~ 198 (206)
T d1rkua_ 160 MLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKREFLK 198 (206)
T ss_dssp HHHHSSEEEEESCCHHH-HHHCTTSCEECSHHHHHHHHHH
T ss_pred HHHhCCccEEECCCHHH-HHhCCCceeecCHHHHHHHHHH
Confidence 99999999999544443 667889975 457777766543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.25 E-value=9.6e-07 Score=94.83 Aligned_cols=62 Identities=21% Similarity=0.315 Sum_probs=50.3
Q ss_pred EecCcc--cHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecC-cchhHHhhcCceeecch
Q 001023 859 CRVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg-~e~~qA~~aSD~~i~~f 922 (1185)
..++|. .|+..++.+.+. ....|+++|||.||.+||+.|++||+++. .+. ++..||+++...
T Consensus 182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~--~k~~A~~i~~~~ 249 (267)
T d1nf2a_ 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEK--VKEASDIVTLTN 249 (267)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHH--HHHHCSEECCCT
T ss_pred eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCCCHH--HHHhCCEEcCCC
Confidence 456775 799999988765 33569999999999999999999999954 443 888999998653
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.19 E-value=4.2e-06 Score=89.24 Aligned_cols=61 Identities=25% Similarity=0.442 Sum_probs=49.1
Q ss_pred EecCcc--cHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecc
Q 001023 859 CRVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 859 ~r~sP~--qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~ 921 (1185)
+.+.|. .|+.-++.+.+. ....|+++|||.||++||+.|+.||+|. +.+. ++..||++...
T Consensus 178 ~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~--lk~~A~~vt~~ 244 (260)
T d2rbka1 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKED--VKAAADYVTAP 244 (260)
T ss_dssp CEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH--HHHHSSEECCC
T ss_pred EEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCCCHH--HHHhCCEEeCC
Confidence 344554 799999988765 3467999999999999999999999995 4444 77899998765
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.18 E-value=1.5e-06 Score=88.89 Aligned_cols=125 Identities=21% Similarity=0.225 Sum_probs=82.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
..++.+++.+.++.++..|..+.++||.....+.......+....-........
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------- 126 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD-------------------------- 126 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET--------------------------
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc--------------------------
Confidence 347889999999999999999999999999988888887666431111100000
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDG 887 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG 887 (1185)
....... ...-..+..|...++.+.+. ....++|+|||
T Consensus 127 ------------~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs 167 (210)
T d1j97a_ 127 ------------GKLTGDV---------------------------EGEVLKENAKGEILEKIAKIEGINLEDTVAVGDG 167 (210)
T ss_dssp ------------TEEEEEE---------------------------ECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESS
T ss_pred ------------ccccccc---------------------------cccccccccccchhhhHHHHhcccccceEEecCC
Confidence 0000000 00001122333333333221 44579999999
Q ss_pred cCChhhhhhcceeEEecCcchhHHhhcCceeecch
Q 001023 888 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 922 (1185)
Q Consensus 888 ~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~f 922 (1185)
.||++|+++|++||++.+.+. .+..||+++...
T Consensus 168 ~nDi~m~~~ag~~va~na~~~--lk~~Ad~vi~~~ 200 (210)
T d1j97a_ 168 ANDISMFKKAGLKIAFCAKPI--LKEKADICIEKR 200 (210)
T ss_dssp GGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSS
T ss_pred cChHHHHHHCCCCEEECCCHH--HHHhCCEEEcCC
Confidence 999999999999999977676 567899999753
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.12 E-value=1.6e-06 Score=93.36 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=45.8
Q ss_pred cHHHHHHHHHhh---CCCeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCceeecc
Q 001023 865 QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 865 qKa~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
.|+.-++.+.+. ....|+++|||.||.+||+.|++||+|+.... .++..||++...
T Consensus 207 ~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~-~~k~~a~~v~~~ 265 (283)
T d2b30a1 207 DKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPV 265 (283)
T ss_dssp CHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSS
T ss_pred hhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCCCH-HHHHhCCEEECC
Confidence 788888888765 33579999999999999999999999954332 288899999853
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=3.2e-05 Score=79.91 Aligned_cols=42 Identities=14% Similarity=0.087 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
..+.+.+.++|++|+++|+++++.||.....+..+....++-
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 347789999999999999999999999999999999998873
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.90 E-value=1.2e-05 Score=83.98 Aligned_cols=43 Identities=9% Similarity=0.051 Sum_probs=38.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+...+.+.++|++|+++|+++++.||.....+..+....++-
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~ 57 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhccc
Confidence 5566678999999999999999999999999999999999874
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.66 E-value=1.2e-05 Score=84.45 Aligned_cols=53 Identities=19% Similarity=0.286 Sum_probs=41.2
Q ss_pred cccHHHHHHHHHhhCC---CeEEEEcCCcCChhhhhhcceeEEecCcchhHHhhcCc
Q 001023 863 PLQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSD 916 (1185)
Q Consensus 863 P~qKa~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGIgisg~e~~qA~~aSD 916 (1185)
...|+..++.+.+..| ..|+++|||.||.+||+.|+.||++...... .+..||
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~-lk~~a~ 215 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPE-LLHWYD 215 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHH-HHHHHH
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCCCHH-HHHHhh
Confidence 4479999999877543 5699999999999999999999999543322 455555
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.32 E-value=0.00026 Score=72.55 Aligned_cols=62 Identities=16% Similarity=0.264 Sum_probs=46.3
Q ss_pred EEecCcc--cHHHHHHHHHhhCCCeEEEEcCCcCChhhhhhcceeEEec-CcchhHHhhcCceeecchhhH
Q 001023 858 CCRVAPL--QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRFL 925 (1185)
Q Consensus 858 ~~r~sP~--qKa~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGIgis-g~e~~qA~~aSD~~i~~f~~l 925 (1185)
+..+.|. .|+.-++.+.+ ..-++++||+.||.+|++.|+-|++|. |. +..+|++.+.+-.-.
T Consensus 150 ~idi~p~g~~Kg~al~~l~~--~~~~i~~GDs~ND~~Mf~~~~~~~av~~g~----~~~~A~~~~~~~~ev 214 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRG--ERPAIIAGDDATDEAAFEANDDALTIKVGE----GETHAKFHVADYIEM 214 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHT--TSCEEEEESSHHHHHHHHTTTTSEEEEESS----SCCCCSEEESSHHHH
T ss_pred EEEEecCCCCHHHHHHHHhc--cccceeecCCCChHHHHhccCCeEEEEeCC----CCccCeEEcCCHHHH
Confidence 3455554 79999999986 356889999999999999998777773 32 234788998764443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.16 E-value=0.00024 Score=73.30 Aligned_cols=54 Identities=15% Similarity=0.223 Sum_probs=44.5
Q ss_pred cHHHHHHHHHhhCCCeEEEEcC----CcCChhhhhhcc-eeEEecCcchhHHhhcCceee
Q 001023 865 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMSSDFAM 919 (1185)
Q Consensus 865 qKa~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~e~~qA~~aSD~~i 919 (1185)
.|+.-++.|.+.....|+++|| |.||..|+++|. .|+++...+.. ++..+||++
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~-~k~~~~~~~ 243 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDT-VQRCREIFF 243 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHH-HHHHHHHHC
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCCHHHH-HHHHHHhcC
Confidence 7999999997756678999999 669999999996 79999666553 677777765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.16 E-value=0.00027 Score=72.28 Aligned_cols=126 Identities=21% Similarity=0.222 Sum_probs=82.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCC
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 810 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1185)
..++.+|++++++.|++.|++++++||.....+..+..++||..--..
T Consensus 93 ~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~-------------------------------- 140 (224)
T d2hsza1 93 ISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE-------------------------------- 140 (224)
T ss_dssp SCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--------------------------------
T ss_pred ccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc--------------------------------
Confidence 335689999999999999999999999999999999999998532111
Q ss_pred CCcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhhCCCeEEEEcCCcCC
Q 001023 811 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND 890 (1185)
Q Consensus 811 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~~g~~vl~iGDG~ND 890 (1185)
++.+.... .+.-.|+--..+.+.++- ....++||||..+|
T Consensus 141 -----------------~~~~~~~~----------------------~~kp~p~~~~~~~~~~~~-~~~~~~~igD~~~D 180 (224)
T d2hsza1 141 -----------------MLGGQSLP----------------------EIKPHPAPFYYLCGKFGL-YPKQILFVGDSQND 180 (224)
T ss_dssp -----------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSHHH
T ss_pred -----------------cccccccc----------------------cccccchhhHHHHHHhhh-hhhccchhcCcHHH
Confidence 11100000 000012212222233332 56789999999999
Q ss_pred hhhhhhcce-eEEec-Ccch--hHHhhcCceeecchhhHHHH
Q 001023 891 VSMIQMADV-GVGIS-GQEG--RQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 891 v~mL~~AdV-GIgis-g~e~--~qA~~aSD~~i~~f~~l~~l 928 (1185)
+.+-+.|++ .|++. |... ......+|+++.++.-|.++
T Consensus 181 i~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 181 IFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp HHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHh
Confidence 999999997 45663 2111 11334589999988776554
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.00 E-value=0.001 Score=67.17 Aligned_cols=118 Identities=13% Similarity=0.140 Sum_probs=85.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 811 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1185)
-++.+++.++++.|+..+ ++.++|+.....+..+....|+..--
T Consensus 83 ~~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (210)
T d2ah5a1 83 AQLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF----------------------------------- 126 (210)
T ss_dssp CEECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred ccchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhcccccc-----------------------------------
Confidence 467899999999999875 89999999999999999988874311
Q ss_pred CcccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh---CCCeEEEEcCCc
Q 001023 812 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 888 (1185)
Q Consensus 812 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~---~g~~vl~iGDG~ 888 (1185)
..++.+.-.+..|..+...+.+. ....++||||+.
T Consensus 127 ------------------------------------------d~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~ 164 (210)
T d2ah5a1 127 ------------------------------------------DGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTK 164 (210)
T ss_dssp ------------------------------------------SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ------------------------------------------cccccccccccccccccchhhhhhhcccccceeecCCH
Confidence 12244455555666666555543 346799999999
Q ss_pred CChhhhhhcce-eEEe-cCcchhHH--hhcCceeecchhhHHH
Q 001023 889 NDVSMIQMADV-GVGI-SGQEGRQA--VMSSDFAMGQFRFLVT 927 (1185)
Q Consensus 889 NDv~mL~~AdV-GIgi-sg~e~~qA--~~aSD~~i~~f~~l~~ 927 (1185)
+|+.|-++|++ .|++ .|....+. ...+|+++.++.-|..
T Consensus 165 ~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 165 FDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp HHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 99999999998 6677 34322222 2348999988766544
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.88 E-value=0.0017 Score=69.16 Aligned_cols=46 Identities=15% Similarity=0.273 Sum_probs=41.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCce
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 778 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~ 778 (1185)
+||+|+++.++.|++.|+++.++||-=......++++.|+..++.+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~ 180 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK 180 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEE
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCce
Confidence 5899999999999999999999999999999999999998765543
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=96.85 E-value=0.0012 Score=67.17 Aligned_cols=41 Identities=20% Similarity=0.142 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.||+.++++.|+++|+++.++||.....+..+....|+.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~ 128 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLR 128 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 35699999999999999999999999999999999999984
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.75 E-value=0.001 Score=68.22 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=37.6
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCchhhHHHHHHHcCccC
Q 001023 733 KLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aG-Ikv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
++-||+.++++.|++.| +++.++||...+.+..+....||..
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~ 133 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDH 133 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCST
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccc
Confidence 45689999999999987 8999999999999999999999853
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.68 E-value=0.00076 Score=63.68 Aligned_cols=108 Identities=14% Similarity=0.181 Sum_probs=74.7
Q ss_pred ecCChhHHHHHHHHHHcCCEEEEecCCeEEEEecCceeeeEEEEEeecCCCCCceEEEEEecCCCcEEEEEcCchhHHHH
Q 001023 570 QGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQSRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFS 649 (1185)
Q Consensus 570 ~~~sp~e~alv~~a~~~g~~~~~r~~~~~~i~~~g~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~ 649 (1185)
.++||...|++++|++.+....... .++-....+|....+...+.+ +| ..+..|++..|..
T Consensus 28 ~SeHPlakAIv~~Ak~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~g~~~---~g--~~v~~G~~~~~~~ 88 (136)
T d2a29a1 28 ADETPEGRSIVILAKQRFNLRERDV--------------QSLHATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRR 88 (136)
T ss_dssp TCCSHHHHHHHHHHHHHHCCCCCCT--------------TTTTCEEEEEETTTTEEEEEE---TT--EEEEEECHHHHHH
T ss_pred CCCchHHHHHHHHHHHhcCCCcccc--------------ccccccccccccccceEEEEE---CC--EEEEecHHHHHHH
Confidence 4579999999999987654321100 111112344555444444333 33 2445699988877
Q ss_pred HHHhhcchhhHHHHHHHHHHHhhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeee
Q 001023 650 VIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 729 (1185)
Q Consensus 650 ~~~~~~~~~~~~~~~~~l~~~a~~GlRtl~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~dl~llG~~~ 729 (1185)
.+... +..+.....+.+++++.+|..++.+|. |-.++|+++
T Consensus 89 ~~~~~-g~~~~~~~~~~~~~~~~~G~Tvv~Va~--------------------------------------d~~~~G~i~ 129 (136)
T d2a29a1 89 HVEAN-GGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVLGVIA 129 (136)
T ss_dssp HHHHH-TCCCCHHHHHHHHHHHHTTSEEEEEEE--------------------------------------TTEEEEEEE
T ss_pred HHHHc-CCCCcHHHHHHHHHHHHCCCeEEEEEE--------------------------------------CCEEEEEEE
Confidence 77655 455677888999999999999999996 778999999
Q ss_pred cccccC
Q 001023 730 IEDKLQ 735 (1185)
Q Consensus 730 ieD~lr 735 (1185)
+.|++|
T Consensus 130 l~D~iK 135 (136)
T d2a29a1 130 LKDIVK 135 (136)
T ss_dssp EEESSC
T ss_pred EEeecC
Confidence 999986
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.53 E-value=0.002 Score=64.66 Aligned_cols=40 Identities=20% Similarity=0.232 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.||+.++++.|++.|+++.++|+-. +.+..+-...|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~-~~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKG-NNAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSC-THHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccc-hhhhhhhhhcccc
Confidence 567999999999999999999999854 4566677777774
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.38 E-value=0.0029 Score=66.01 Aligned_cols=42 Identities=33% Similarity=0.348 Sum_probs=38.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.++.+|+.++++.|++.|+++.++||...+.+..+-...|+.
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred CccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 368899999999999999999999999999999888888874
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.13 E-value=0.0046 Score=61.13 Aligned_cols=60 Identities=18% Similarity=0.254 Sum_probs=41.6
Q ss_pred HHHHHHhh--CCCeEEEEcCCcCChhhhhhccee--EEe-cCcch-hHHhhcCceeecchhhHHHH
Q 001023 869 IVALVKTR--TSDMTLAIGDGANDVSMIQMADVG--VGI-SGQEG-RQAVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 869 iV~~lk~~--~g~~vl~iGDG~NDv~mL~~AdVG--Igi-sg~e~-~qA~~aSD~~i~~f~~l~~l 928 (1185)
+.+.+++. ....++||||..+|+.|=+.|+++ +.+ .|... ......||+++.++.-+..+
T Consensus 114 ~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 114 LLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp HHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 33444442 445789999999999999999995 444 34321 12445699999998877765
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.01 E-value=0.0024 Score=65.52 Aligned_cols=44 Identities=20% Similarity=0.299 Sum_probs=35.3
Q ss_pred cHHHHHHHHHhhCCCeEEEEcC----CcCChhhhhhcc-eeEEecCcch
Q 001023 865 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEG 908 (1185)
Q Consensus 865 qKa~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGIgisg~e~ 908 (1185)
.|+.-++.|.+.....|+++|| |.||.+||+.|. .|+++++.|.
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~ 233 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED 233 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCCHHH
Confidence 7988888886656678999999 889999999996 7888877665
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.98 E-value=0.009 Score=60.98 Aligned_cols=122 Identities=16% Similarity=0.128 Sum_probs=78.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 812 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1185)
++.||+.++++.|+ +|+++.++|+-..+....+...+|+..-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd----------------------------------- 143 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD----------------------------------- 143 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc-----------------------------------
Confidence 56799999999997 589999999988888888888888843100
Q ss_pred cccCCCCcCcCcEEEEEcCchhhhhccHHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh--CCCeEEEEcCC-cC
Q 001023 813 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR--TSDMTLAIGDG-AN 889 (1185)
Q Consensus 813 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~--~g~~vl~iGDG-~N 889 (1185)
.++.+.... ...|+ ...+-..+++. ....+++|||. .+
T Consensus 144 --------------~i~~s~~~~------------------------~~KP~-~~~~~~~~~~l~~~p~~~l~vgD~~~~ 184 (230)
T d1x42a1 144 --------------SITTSEEAG------------------------FFKPH-PRIFELALKKAGVKGEEAVYVGDNPVK 184 (230)
T ss_dssp --------------EEEEHHHHT------------------------BCTTS-HHHHHHHHHHHTCCGGGEEEEESCTTT
T ss_pred --------------ccccccccc------------------------ccchh-hHHHHHHHhhhcccccccceeecCcHh
Confidence 011110000 00111 12222223332 45679999997 68
Q ss_pred ChhhhhhcceeE-Eec-CcchhHHhhcCceeecchhhHHHHH
Q 001023 890 DVSMIQMADVGV-GIS-GQEGRQAVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 890 Dv~mL~~AdVGI-gis-g~e~~qA~~aSD~~i~~f~~l~~ll 929 (1185)
|+.+=+.|++-. ++. +.+..+....+|+++.+++-|..+|
T Consensus 185 Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 185 DCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp THHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 999988888754 442 2222234567899999988876663
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.62 E-value=0.0049 Score=61.90 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=35.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
++.||+.++++.|+ +++++.++|+-....+..+....|+.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~ 121 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFM 121 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGG
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccc
Confidence 46699999999997 58999999999999999998888874
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.52 E-value=0.012 Score=60.63 Aligned_cols=40 Identities=18% Similarity=0.224 Sum_probs=35.3
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
+-||+.++++.|++ |++++++|+.........-..+|+..
T Consensus 110 ~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 110 LADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred cCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccc
Confidence 56999999999985 89999999998888888888889853
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.42 E-value=0.011 Score=58.33 Aligned_cols=40 Identities=15% Similarity=0.307 Sum_probs=32.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.+.+|+++.++.|++.|+++.++|+-.. .+..+-...++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~-~~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCcc-chhhhhhhhccc
Confidence 5679999999999999999999998654 445666777764
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.90 E-value=0.028 Score=54.05 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=29.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCch-hhHHHHHHHcC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQ-ETAISIGYSSK 771 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~-eTAi~Ia~~~g 771 (1185)
++.||+.++++.|++.|+++.++|+-+. ..+...-...+
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~ 85 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFD 85 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccc
Confidence 6789999999999999999999996543 34444433333
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=93.42 E-value=0.023 Score=57.95 Aligned_cols=43 Identities=21% Similarity=0.209 Sum_probs=38.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCcc
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 773 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll 773 (1185)
.-.+.||+.++++.|++.|+++.++|+........+...+|+.
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 4466899999999999999999999999998888888888874
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=93.23 E-value=0.19 Score=51.66 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=36.9
Q ss_pred CCCeEEEEcCCc-CChhhhhhcce-eEEe-cCcchh---H-HhhcCceeecchhhHHHH
Q 001023 877 TSDMTLAIGDGA-NDVSMIQMADV-GVGI-SGQEGR---Q-AVMSSDFAMGQFRFLVTL 928 (1185)
Q Consensus 877 ~g~~vl~iGDG~-NDv~mL~~AdV-GIgi-sg~e~~---q-A~~aSD~~i~~f~~l~~l 928 (1185)
....++||||.. +|+.+-++|.+ +|.+ +|.... + +....|+++.+..-|.++
T Consensus 201 ~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 201 PKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp CGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred CchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 557899999996 59999999997 5666 443211 1 112359999988777766
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=93.08 E-value=0.017 Score=54.53 Aligned_cols=30 Identities=20% Similarity=0.274 Sum_probs=27.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCch
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQ 760 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~ 760 (1185)
+|++.+++.+.++.|+++|.+|.++||-..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 678999999999999999999999999754
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=92.97 E-value=0.36 Score=49.20 Aligned_cols=47 Identities=15% Similarity=0.193 Sum_probs=32.9
Q ss_pred EeeecccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHH---HHHcCc
Q 001023 726 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISI---GYSSKL 772 (1185)
Q Consensus 726 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~I---a~~~gl 772 (1185)
|.+.-.+++=+++.++|+.|+++|++++.+|+-...+...+ -.++|+
T Consensus 12 GTL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~ 61 (250)
T d2c4na1 12 GVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGV 61 (250)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTC
T ss_pred CeeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccc
Confidence 33334455558999999999999999999996554443333 334665
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=92.85 E-value=0.13 Score=52.94 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=30.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHH
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 769 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~ 769 (1185)
.+.+=+++.++|+.|+++|++++++|+-...+...+++.
T Consensus 16 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~ 54 (253)
T d1wvia_ 16 GKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM 54 (253)
T ss_dssp TTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred CCCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 344448899999999999999999998665555555544
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=92.74 E-value=0.16 Score=52.21 Aligned_cols=39 Identities=8% Similarity=0.120 Sum_probs=32.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHc
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 770 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~ 770 (1185)
++.=+++.++|+.|+++|++++++|+....+...++..+
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333478999999999999999999998877777776654
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=91.19 E-value=0.2 Score=49.92 Aligned_cols=25 Identities=36% Similarity=0.389 Sum_probs=23.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTG 757 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTG 757 (1185)
++-|||.++|+.|+++|+++.++|.
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTN 72 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTN 72 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEE
T ss_pred EecccHHHHHHHHHhhCCeEEEecc
Confidence 4679999999999999999999996
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=91.05 E-value=0.14 Score=51.12 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=34.5
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 731 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 731 eD~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
..++-+|+.+.++.|++.|+++.++|+... +..+-...|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 467889999999999999999999999654 566667777753
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.87 E-value=0.48 Score=46.82 Aligned_cols=53 Identities=11% Similarity=0.291 Sum_probs=38.4
Q ss_pred CCCeEEEEcCCcCChhhhhhccee-EEecCcch---hH----HhhcCceeecchhhHHHHH
Q 001023 877 TSDMTLAIGDGANDVSMIQMADVG-VGISGQEG---RQ----AVMSSDFAMGQFRFLVTLL 929 (1185)
Q Consensus 877 ~g~~vl~iGDG~NDv~mL~~AdVG-Igisg~e~---~q----A~~aSD~~i~~f~~l~~ll 929 (1185)
....+++|||..+|+.+=+.|++- |++.+... .+ ...-+|+++.+++-|..+|
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 456899999999999999999974 57743321 01 1123899999998876663
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=86.33 E-value=0.23 Score=49.11 Aligned_cols=43 Identities=9% Similarity=0.159 Sum_probs=34.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCch----hhHHHHHHHcCccCCC
Q 001023 734 LQQGVPEAIESLRAAGIKVWVLTGDKQ----ETAISIGYSSKLLTSK 776 (1185)
Q Consensus 734 lr~~v~e~I~~L~~aGIkv~mLTGD~~----eTAi~Ia~~~gll~~~ 776 (1185)
+.+|+.+.++.+++.|++|+.+||... .|+.++-+..|+...+
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~ 133 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATN 133 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccc
Confidence 457999999999999999999999653 4666766777875443
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=84.99 E-value=0.29 Score=48.43 Aligned_cols=25 Identities=16% Similarity=0.333 Sum_probs=23.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTG 757 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTG 757 (1185)
++.+++.++++.|+++|+++.++|+
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~ 121 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTN 121 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCccHHHHHHHHHhcCCceEEeec
Confidence 5679999999999999999999996
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=84.87 E-value=0.47 Score=46.73 Aligned_cols=43 Identities=16% Similarity=0.256 Sum_probs=36.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccC
Q 001023 732 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 774 (1185)
Q Consensus 732 D~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~ 774 (1185)
..+.+++.++++.|++.|+++.++|+-....+.......++..
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~ 134 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRD 134 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred ccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccc
Confidence 3567899999999999999999999998888888877777653
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=84.82 E-value=2.1 Score=42.27 Aligned_cols=153 Identities=18% Similarity=0.181 Sum_probs=88.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchhhHHHHHHHcCccCCCceEEEEeCC-----CHHHHHHHHHHHHHhhcccccC
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSN-----SKESCRKSLEDAIAMSKKLKTV 807 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~eTAi~Ia~~~gll~~~~~~~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~ 807 (1185)
++-||+.++++.|+++ ....++|---..-+.++|...|+- .+...-+.. -+.+.++.+-+.......
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp---~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d---- 152 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIAS---- 152 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHH----
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC---ceeecccccccccCCChHHHHHHHHHhhhccC----
Confidence 4569999999999886 566666655667788999999984 122222222 112222222221110000
Q ss_pred CCCCCcccCCCCcCcCcEEEEEcCchhhhhccHH-HHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhh-CCCeEEEEc
Q 001023 808 PGVSHNSERSSGAGVAQLALIIDGTSLVYILDSE-LDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-TSDMTLAIG 885 (1185)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~-~~~~~~~l~~~~~~vi~~r~sP~qKa~iV~~lk~~-~g~~vl~iG 885 (1185)
-|+..|..++++- -+-....++...+.| --..|+.+++..-.. .-...+.||
T Consensus 153 ---------------------~~~eel~e~~d~~f~~~e~~~i~e~Vk~V-----Ggg~k~~i~~~~~~~~~~~~~~~VG 206 (308)
T d1y8aa1 153 ---------------------LSGEELFRKLDELFSRSEVRKIVESVKAV-----GAGEKAKIMRGYCESKGIDFPVVVG 206 (308)
T ss_dssp ---------------------CCHHHHHHHHHHHHHSHHHHHHHHTCBCC-----CHHHHHHHHHHHHHHHTCSSCEEEE
T ss_pred ---------------------ccHHHHHHHHHHHhccchHhhHHhhhccc-----CCchhHHHHHhhcccccCCcceecc
Confidence 0112222222220 112334444455544 125677777765432 223458999
Q ss_pred CCcCChhhhhhcc----eeEEecCcchhHHhhcCceeecc
Q 001023 886 DGANDVSMIQMAD----VGVGISGQEGRQAVMSSDFAMGQ 921 (1185)
Q Consensus 886 DG~NDv~mL~~Ad----VGIgisg~e~~qA~~aSD~~i~~ 921 (1185)
|++.|+.||+.|. +.|+..|.+- |...||+++..
T Consensus 207 DSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS 244 (308)
T d1y8aa1 207 DSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIIS 244 (308)
T ss_dssp CSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEEC
T ss_pred CccccHHHHHHHhcCCCeeEEecCccc--cccccceEEec
Confidence 9999999999884 4455578887 99999999876
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.44 E-value=0.47 Score=46.52 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=25.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCchh
Q 001023 733 KLQQGVPEAIESLRAAGIKVWVLTGDKQE 761 (1185)
Q Consensus 733 ~lr~~v~e~I~~L~~aGIkv~mLTGD~~e 761 (1185)
++.+++.++++.|++.|++++++|+....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchh
Confidence 46789999999999999999999975443
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