Query 001024
Match_columns 1185
No_of_seqs 490 out of 4170
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 07:04:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyv_A AOH1; oxidoreductase, m 100.0 3E-225 9E-230 2195.2 91.1 1081 3-1170 24-1141(1335)
2 3unc_A Xanthine dehydrogenase/ 100.0 7E-223 2E-227 2157.4 102.9 1082 2-1170 19-1136(1332)
3 1vlb_A Aldehyde oxidoreductase 100.0 1E-141 5E-146 1354.0 67.0 551 585-1169 174-747 (907)
4 1dgj_A Aldehyde oxidoreductase 100.0 2E-140 8E-145 1342.6 68.3 552 585-1169 174-749 (907)
5 3nvz_C Xanthine dehydrogenase/ 100.0 7E-118 2E-122 1117.0 60.2 558 585-1170 1-566 (755)
6 2w3s_B Xanthine dehydrogenase; 100.0 8E-116 3E-120 1102.7 62.5 564 586-1170 2-605 (777)
7 1rm6_A 4-hydroxybenzoyl-COA re 100.0 1E-113 4E-118 1083.1 59.0 559 582-1169 6-600 (769)
8 1ffv_B CUTL, molybdoprotein of 100.0 2E-113 8E-118 1083.9 55.3 569 583-1169 14-646 (803)
9 1n62_B Carbon monoxide dehydro 100.0 2E-112 8E-117 1076.6 56.1 567 585-1169 19-652 (809)
10 1t3q_B Quinoline 2-oxidoreduct 100.0 4E-112 2E-116 1071.5 56.7 548 586-1157 13-612 (788)
11 3hrd_A Nicotinate dehydrogenas 100.0 1.9E-92 6.4E-97 835.5 43.9 405 582-1002 3-415 (425)
12 2w3s_A Xanthine dehydrogenase; 100.0 1.5E-93 5.1E-98 848.5 32.8 429 2-532 16-453 (462)
13 3nvz_B Xanthine dehydrogenase/ 100.0 5.3E-56 1.8E-60 503.6 29.5 293 217-533 3-304 (305)
14 3hrd_C Nicotinate dehydrogenas 100.0 1.2E-55 4.1E-60 498.3 25.9 278 223-533 3-290 (296)
15 1t3q_C Quinoline 2-oxidoreduct 100.0 1.3E-53 4.5E-58 479.8 27.7 273 223-533 5-283 (288)
16 1n62_C Carbon monoxide dehydro 100.0 2.5E-52 8.5E-57 470.1 27.7 276 223-533 5-286 (288)
17 1rm6_B 4-hydroxybenzoyl-COA re 100.0 2.4E-52 8.3E-57 473.9 27.5 270 223-531 6-322 (324)
18 1ffv_C CUTM, flavoprotein of c 100.0 1.1E-49 3.9E-54 448.2 27.4 275 223-532 5-285 (287)
19 3nvw_A Xanthine dehydrogenase/ 100.0 1.4E-50 4.8E-55 409.5 10.3 146 2-167 18-163 (164)
20 3hrd_D Nicotinate dehydrogenas 100.0 6.5E-46 2.2E-50 376.1 12.6 136 3-169 19-154 (160)
21 1ffv_A CUTS, iron-sulfur prote 100.0 2.3E-43 8E-48 359.8 12.5 136 3-169 19-154 (163)
22 1n62_A Carbon monoxide dehydro 100.0 3.8E-43 1.3E-47 359.3 12.7 137 3-169 19-155 (166)
23 1rm6_C 4-hydroxybenzoyl-COA re 100.0 1E-38 3.5E-43 326.7 12.5 136 3-169 18-153 (161)
24 1t3q_A Quinoline 2-oxidoreduct 100.0 1.2E-34 4E-39 299.7 11.5 135 4-169 26-160 (168)
25 3hrd_B Nicotinate dehydrogenas 99.9 1.2E-22 4.2E-27 231.9 18.3 142 1021-1170 2-165 (330)
26 3vr8_B Iron-sulfur subunit of 98.5 4.7E-08 1.6E-12 108.5 5.0 64 6-84 65-128 (282)
27 2wdq_B Succinate dehydrogenase 98.2 6.6E-07 2.3E-11 97.6 5.6 62 6-83 32-95 (238)
28 2bs2_B Quinol-fumarate reducta 98.2 1.1E-06 3.6E-11 96.2 5.8 68 2-84 29-96 (241)
29 2h88_B Succinate dehydrogenase 98.2 9.9E-07 3.4E-11 97.1 4.9 64 6-84 41-104 (252)
30 1kf6_B Fumarate reductase iron 97.7 2.2E-05 7.5E-10 85.8 5.2 66 3-84 30-95 (243)
31 3c8y_A Iron hydrogenase 1; dit 97.6 1.3E-05 4.5E-10 98.3 2.3 100 3-121 13-115 (574)
32 1uxy_A MURB, uridine diphospho 97.6 4.8E-05 1.6E-09 87.1 6.5 158 218-405 9-180 (340)
33 1hsk_A UDP-N-acetylenolpyruvoy 97.3 0.00042 1.4E-08 78.9 8.3 153 223-405 49-208 (326)
34 3hrd_B Nicotinate dehydrogenas 96.5 0.049 1.7E-06 61.9 16.8 59 769-827 21-90 (330)
35 3tx1_A UDP-N-acetylenolpyruvoy 95.9 0.012 4.3E-07 66.5 8.3 154 223-404 55-213 (322)
36 1ffv_B CUTL, molybdoprotein of 95.8 0.25 8.6E-06 62.7 20.0 57 771-827 500-567 (803)
37 2vfr_A Xylitol oxidase, aldito 95.4 0.0076 2.6E-07 71.0 3.9 102 224-348 22-123 (422)
38 4feh_A Oxidoreductase DPRE1; a 95.3 0.049 1.7E-06 65.2 10.4 156 223-405 43-213 (481)
39 4bby_A Alkyldihydroxyacetoneph 94.6 0.025 8.7E-07 70.4 5.6 110 223-350 206-319 (658)
40 3pm9_A Putative oxidoreductase 94.2 0.031 1E-06 66.9 5.0 109 223-350 52-161 (476)
41 2uuu_A Alkyldihydroxyacetoneph 93.6 0.039 1.3E-06 67.6 4.3 110 223-350 138-250 (584)
42 3i99_A UDP-N-acetylenolpyruvoy 93.0 0.2 6.9E-06 57.4 8.7 108 218-350 25-137 (357)
43 1f0x_A DLDH, D-lactate dehydro 92.9 0.094 3.2E-06 63.9 6.2 110 223-350 46-160 (571)
44 1rm6_A 4-hydroxybenzoyl-COA re 92.6 0.48 1.7E-05 59.8 12.2 188 769-959 457-746 (769)
45 1e8g_A Vanillyl-alcohol oxidas 92.1 0.15 5.1E-06 62.2 6.6 110 223-350 71-185 (560)
46 1t3q_B Quinoline 2-oxidoreduct 92.0 0.52 1.8E-05 59.7 11.4 184 771-957 484-761 (788)
47 1wvf_A 4-cresol dehydrogenase 91.9 0.11 3.7E-06 62.9 5.0 84 223-307 57-142 (520)
48 2exr_A Cytokinin dehydrogenase 91.8 0.17 5.9E-06 61.2 6.5 107 223-349 62-176 (524)
49 1n62_B Carbon monoxide dehydro 91.1 4.5 0.00015 51.4 18.7 186 771-959 506-786 (809)
50 1dgj_A Aldehyde oxidoreductase 90.8 2.1 7.3E-05 54.9 15.4 136 2-168 16-154 (907)
51 2i0k_A Oxidoreductase; MIX alp 90.7 0.16 5.3E-06 62.0 4.6 106 223-348 36-148 (561)
52 3zyv_A AOH1; oxidoreductase, m 90.1 1.8 6.1E-05 58.0 14.3 60 768-827 1018-1088(1335)
53 1vlb_A Aldehyde oxidoreductase 89.6 0.99 3.4E-05 58.0 10.8 136 2-168 16-154 (907)
54 3rja_A Carbohydrate oxidase; p 88.8 0.89 3E-05 54.2 9.1 84 223-307 37-121 (473)
55 2gqt_A UDP-N-acetylenolpyruvyl 88.7 0.37 1.3E-05 53.0 5.3 148 218-405 17-171 (268)
56 1l5p_A Ferredoxin; [2Fe-2S] cl 88.4 0.39 1.3E-05 43.8 4.4 49 29-77 33-92 (93)
57 3js8_A Cholesterol oxidase; ch 88.0 0.26 8.9E-06 59.4 3.7 157 223-405 30-216 (540)
58 1w1o_A Cytokinin dehydrogenase 87.8 0.26 8.8E-06 59.8 3.5 156 223-404 69-243 (534)
59 2bvf_A 6-hydroxy-D-nicotine ox 87.0 0.97 3.3E-05 53.6 7.8 82 223-307 39-120 (459)
60 2y3s_A TAML; oxidoreductase; H 86.9 1.2 4.2E-05 53.7 8.8 80 223-306 59-140 (530)
61 3fw9_A Reticuline oxidase; BI- 86.9 1.2 4.1E-05 53.3 8.6 156 223-404 46-214 (495)
62 2wdx_A Putative hexose oxidase 85.8 1.4 4.6E-05 53.3 8.3 82 223-306 58-139 (523)
63 2ipi_A Aclacinomycin oxidoredu 85.6 1.4 4.7E-05 53.2 8.3 80 223-306 56-137 (521)
64 1zr6_A Glucooligosaccharide ox 85.2 1.3 4.6E-05 53.0 7.9 80 223-306 43-124 (503)
65 3pop_A GILR oxidase; FAD bindi 84.8 1.5 5E-05 52.7 7.9 80 223-306 35-116 (501)
66 3vte_A Tetrahydrocannabinolic 84.7 1.3 4.5E-05 53.2 7.4 83 223-307 54-137 (518)
67 1a70_A Ferredoxin; iron-sulfur 81.4 0.8 2.7E-05 42.1 2.9 33 5-47 20-52 (97)
68 1frr_A Ferredoxin I; electron 81.3 0.75 2.6E-05 41.9 2.7 62 5-78 19-88 (95)
69 1awd_A Ferredoxin; electron tr 79.7 1.1 3.6E-05 40.9 3.2 33 5-47 18-50 (94)
70 1iue_A Ferredoxin; electron tr 78.6 1.1 3.8E-05 41.1 3.0 33 5-47 20-52 (98)
71 1jq4_A Methane monooxygenase c 77.8 0.81 2.8E-05 42.1 1.7 32 5-46 23-54 (98)
72 1czp_A Ferredoxin I; [2Fe-2S] 77.6 1.2 4.3E-05 40.8 3.0 33 5-47 22-54 (98)
73 3nvz_C Xanthine dehydrogenase/ 77.4 2.1 7.1E-05 54.0 5.8 73 769-843 444-527 (755)
74 1wri_A Ferredoxin II, ferredox 76.0 1.5 5E-05 39.9 2.9 32 5-47 19-50 (93)
75 2w3s_B Xanthine dehydrogenase; 72.5 3.9 0.00013 51.7 6.5 72 770-843 465-547 (777)
76 1i7h_A Ferredoxin; 2Fe-2S,elec 69.6 2.7 9.1E-05 39.5 3.1 33 6-48 24-57 (111)
77 2wlb_A ETP1-FD, electron trans 69.1 2.7 9.2E-05 38.9 3.0 34 5-48 22-56 (103)
78 3hrd_A Nicotinate dehydrogenas 64.8 12 0.00043 43.6 8.2 71 1038-1127 188-258 (425)
79 3tsh_A Pollen allergen PHL P 4 61.6 14 0.00048 44.1 8.0 83 223-307 53-138 (500)
80 1frd_A Heterocyst [2Fe-2S] fer 60.5 5.2 0.00018 36.4 3.2 32 6-47 23-54 (98)
81 1ep3_B Dihydroorotate dehydrog 57.5 5.5 0.00019 43.0 3.2 38 8-46 201-238 (262)
82 3unc_A Xanthine dehydrogenase/ 56.9 9.3 0.00032 51.0 5.8 73 769-843 1014-1097(1332)
83 3lxf_A Ferredoxin; iron, iron- 54.9 7.5 0.00026 36.0 3.2 49 30-78 35-100 (104)
84 3i9v_3 NADH-quinone oxidoreduc 44.0 8.1 0.00028 48.9 2.1 71 33-111 39-126 (783)
85 1doi_A 2Fe-2S ferredoxin; halo 40.2 17 0.00057 35.1 3.2 18 30-47 59-76 (128)
86 1b9r_A Protein (terpredoxin); 37.5 17 0.00057 33.5 2.6 20 29-48 34-54 (105)
87 2pia_A Phthalate dioxygenase r 33.9 21 0.00071 39.8 3.2 18 30-47 268-285 (321)
88 3hui_A Ferredoxin; cytochrome 33.0 23 0.00078 34.1 2.8 49 30-78 56-121 (126)
89 1uwm_A Ferredoxin VI, FDVI; el 32.7 19 0.00066 33.1 2.2 49 30-78 35-101 (106)
90 1xlq_A Putidaredoxin, PDX; [2F 30.7 22 0.00075 32.7 2.2 50 29-78 34-101 (106)
91 3ah7_A [2Fe-2S]ferredoxin; [2F 29.3 32 0.0011 32.0 3.1 18 30-47 38-56 (113)
92 3abf_A 4-oxalocrotonate tautom 27.2 35 0.0012 27.8 2.7 31 796-826 24-57 (64)
93 1erd_A Pheromone ER-2; NMR {Eu 26.9 28 0.00094 25.2 1.6 28 92-119 5-32 (40)
94 1krh_A Benzoate 1,2-dioxygenas 20.7 50 0.0017 36.8 3.2 18 30-47 37-54 (338)
No 1
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=100.00 E-value=2.5e-225 Score=2195.18 Aligned_cols=1081 Identities=29% Similarity=0.486 Sum_probs=944.4
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCC
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGL 82 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~ 82 (1185)
.++.-+||+.||.-++ ++|||+||+||+||||||+|+++|+.++++.+++|||||+|++++||++|+|||||
T Consensus 24 ~~p~~tLl~~LR~~~~--------ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~g~~v~TvEgl 95 (1335)
T 3zyv_A 24 ADPEVNLLFYLRKVIR--------LTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLHGAAVTTVEGI 95 (1335)
T ss_dssp CCTTCBHHHHHHHTTC--------CTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECHHHH
T ss_pred CCcCccHHHHHhccCC--------CcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHHhcCCEEEeeCCC
Confidence 3566677777777666 78899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHHH
Q 001024 83 GNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 162 (1185)
Q Consensus 83 ~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 162 (1185)
|+++++||||||+|+++|||||||||||||||||+||+| ++.| |++||+++|+||||||||||||+||
T Consensus 96 g~~~~~lHpvQ~~~a~~hgsQCGFCTPGfVMSmyall~~-----~~~p-------t~~~ie~al~GNLCRCTGYRPIldA 163 (1335)
T 3zyv_A 96 GSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRN-----HPEP-------STEQIMETLGGNLCRCTGYRPIVES 163 (1335)
T ss_dssp CCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHHTTCCCSSSCSHHHHHH
T ss_pred CCCCCCCCHHHHHHHhcCCCcCCCCCcHHHHHHHHHHHc-----CCCC-------CHHHHHHHhCCcccccCCCHHHHHH
Confidence 987789999999999999999999999999999999965 4556 4999999999999999999999999
Q ss_pred HHHhhhcccccccC-CcccccCCCCc-----------ccccCCCCCCCCCCCccCCCcchhccc----CccccccC-CcE
Q 001024 163 CKSFAADVDIEDLG-INSFWAKGESK-----------EVKISRLPPYKHNGELCRFPLFLKKEN----SSAMLLDV-KGS 225 (1185)
Q Consensus 163 ~~~~~~~~~~~~~~-~~~c~~~~~~~-----------~~~~~~~~~~~~~~~~~~~p~~l~~~~----~~~~~~~~-~~~ 225 (1185)
+|+|+.+.++++.. ...||.+.+.. ....+++++++|+++. +|||+|.... ...+.+.+ +.+
T Consensus 164 ~ksfa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~-ifppel~~~~~~~~~~~l~~~g~~~~ 242 (1335)
T 3zyv_A 164 AKSFCPSSTCCQMNGEGKCCLDEEKNEPERKNSVCTKLYEKKEFQPLDPTQEL-IFPPELMRMAEESQNTVLTFRGERTT 242 (1335)
T ss_dssp HHTTCC-----------------------------CCSSCGGGSCCCCGGGSC-CCCHHHHHHHC--CCCCEEEECSSCE
T ss_pred HHHhhccCccccccCCCcccccccccCcccccccccccccccccCCCCccccc-cCCHHHHhhhhccccceeeecCCCce
Confidence 99999887666542 23343221111 1345678899999876 8999986422 23466666 889
Q ss_pred EEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccc-cc-cCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHHH
Q 001024 226 WHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYY-KE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 303 (1185)
Q Consensus 226 ~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~-k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 303 (1185)
||+|.||+|+++++++ +|+++||+|||+++++ +. ...++++||+++|+||+.|+.++++|+|||+|||+++++
T Consensus 243 w~~P~tl~el~~l~~~-----~p~a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~~~ 317 (1335)
T 3zyv_A 243 WIAPGTLNDLLELKMK-----HPSAPLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQVKN 317 (1335)
T ss_dssp EEECSSHHHHHHHHHH-----CTTSCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHHHH
T ss_pred EecCCCHHHHHHHHHH-----CCCCeEEEecccceeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHHHH
Confidence 9999999999999994 6899999999999994 33 357899999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEechh
Q 001024 304 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE 383 (1185)
Q Consensus 304 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vpl~d 383 (1185)
.+...+++++++..+++|+|.+++++|||+||||+||||||||++||+ ||++|+|+|+||+|+|.+.+|.|++|++|
T Consensus 318 ~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asPi---sD~~p~L~A~~A~l~l~~~~g~r~i~l~d 394 (1335)
T 3zyv_A 318 VLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPT---SDLNPILGIGNCILNVASTEGIQQIPLND 394 (1335)
T ss_dssp HHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCTT---CSSHHHHGGGTCEEEEECSSCEEEEECCT
T ss_pred HHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCCc---chHHHHHHhhCCEEEEecCCceEEEechH
Confidence 998887888888888999999999999999999999999999999999 99999999999999999999999999988
Q ss_pred hc-cC---CCCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceeeee
Q 001024 384 FL-ER---PPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNC 459 (1185)
Q Consensus 384 F~-~~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~~~ 459 (1185)
|| .+ ++|+++|||++|+||.+.. ..+|.+||+++| +++|||+||+||++.+++ ++++|+++
T Consensus 395 ~F~~gyrk~~l~~~eil~si~iP~~~~----------~~~~~~yK~s~R-~d~dia~Vnaa~~v~l~~----~~~~v~~~ 459 (1335)
T 3zyv_A 395 HFLAGVPDAILKPEQVLISVFVPRSSK----------WEFVSAFRQAPR-QQNAFATVNAGMKVVFKE----DTNTITDL 459 (1335)
T ss_dssp TTSCC----CCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSSCCSEEEEEEEEC--------CBCSEE
T ss_pred hhhhcccccccCCCcEEEEeeccCCch----------hhhhhheeeccc-cccchhhheeeeeEEEec----CCCeEeEE
Confidence 44 43 4899999999999998765 577899999999 699999999999999964 35799999
Q ss_pred EEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCCcCCCC--CcHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 001024 460 RLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT--SIPAYRSSLAVGFLYEFFGSLTEMKNGIS 537 (1185)
Q Consensus 460 ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~--~sa~YR~~la~~l~~r~l~~~~~~~~~~~ 537 (1185)
||+||||+++ |+|+.++|++|+||+|+++++++|+++|.+++.|..+. ++++||+.|+.+||+||++++..+++...
T Consensus 460 ~iafGGma~~-~~rA~~te~~L~Gk~~~~~~l~~A~~~L~~e~~p~~~~~g~~~~YR~~la~~ll~kf~l~~~~~~~~~~ 538 (1335)
T 3zyv_A 460 GILYGGIGAT-VISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLKQLKTRD 538 (1335)
T ss_dssp EEEEESSSSS-CC---CTTGGGTTCBC---CHHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEecCcCc-cccHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 9999999999 99999999999999999999999999999999887663 68999999999999999999998764311
Q ss_pred ccccCCCCCCCccccccccccccccccccccccCCccccccccC----CCCCCCCCcccccchhhhccccccccccCCCC
Q 001024 538 RDWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQLS----REYYPVGEPITKSGAALQASGEAIYVDDIPSP 613 (1185)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~----~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~ 613 (1185)
+. ..++++... .+ ....+++++|.+.|.|++. +.+++||||++|+|++.||||+++|++|++.+
T Consensus 539 ~~---~~~~~~~~~-------~~--~~~~~~~~~~~~~q~~~~~~~~~~~~~~IGk~v~R~d~~~kvtG~a~Y~~Di~~~ 606 (1335)
T 3zyv_A 539 PH---KYPDISQKL-------LH--ILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVL 606 (1335)
T ss_dssp ---------CCHHH-------HG--GGCCCCCC---CCEECCCCCTTSCTTCCTTSCCCCTTHHHHHHTCCCCSTTSCCC
T ss_pred cc---cCCCcchhh-------cc--cccccCCCCCCcccccccccccCCCCCCCCCCCcCcChHHHCCCcccccccCCCC
Confidence 10 111111111 11 2456788899999998753 45678999999999999999999999999756
Q ss_pred CCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCCCCccccCCcccccCCceeecCCeEEEEEECCH
Q 001024 614 INCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKTIFGSEPLFADELTRCAGQPVAFVVADSQ 693 (1185)
Q Consensus 614 ~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~~~~~~~~~~~~~a~~~V~y~GqpVa~VVAes~ 693 (1185)
|||||++|||||++||+|++||+++|+++|||++|+|++|+| |.|. ..++|+|++++|+|+|||||+|||+|+
T Consensus 607 pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~aV~T~~DiP--~~~~-----~~~~~~la~d~Vr~~Gq~VA~VvAet~ 679 (1335)
T 3zyv_A 607 PGELFLAVVTSSKSHAKIISLDASEALASLGVVDVVTARDVP--GDNG-----REEESLYAQDEVICVGQIVCAVAADSY 679 (1335)
T ss_dssp TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECGGGCS--SCCC-------CCCSSCCSEECSTTCEEEEEEESSH
T ss_pred CCCEEEEEEeCCCCCeEEEEEEhHHHhcCCCeEEEEehhhcC--CcCC-----CCCcccCCCCeEEEcCCEEEEEEECCH
Confidence 899999999999999999999999999999999999999999 5442 368899999999999999999999999
Q ss_pred HHHHHhcccceEEEecCCCCCccCCHHHHhhcCCCcccCCccccCCCCChhcccccCCeeEEEEEEEeccccCCCcCCCc
Q 001024 694 KNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQT 773 (1185)
Q Consensus 694 ~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~ 773 (1185)
++|++|+++|+|+| |+++|.+.++++|++.+++...+ ...+.||++++|++||++ ||++|++++|+|+||||++
T Consensus 680 ~~A~~Aa~~V~VeY--e~l~P~v~~~~~a~~~~~~~~~~---~~~~~Gd~~~af~~a~~v-ve~~y~~~~~~h~~mEp~~ 753 (1335)
T 3zyv_A 680 AHAQQAAKKVKIVY--QDIEPMIVTVQDALQYESFIGPE---RKLEQGNVEEAFQCADQI-LEGEVHLGGQEHFYMETQS 753 (1335)
T ss_dssp HHHHHHHTTCEEEE--EECSCCCCSHHHHHHTTCCEEEE---EEEEESCHHHHTTSSSEE-EEEEEEECCBCCCCSSCCE
T ss_pred HHHHHHhcCCeEEE--EeCCCccCCHHHHhhcccccCcc---ccccCCCHHHHHhhCCeE-EEEEEEECceeccccCCcc
Confidence 99999999999999 78866789999999987653211 135789999999999995 9999999999999999999
Q ss_pred eEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeC
Q 001024 774 ALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVK 852 (1185)
Q Consensus 774 avA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~s 852 (1185)
|+|+|+ +||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.+....+++.||+||+++||||||+||
T Consensus 754 ~~a~~~~edg~l~v~~sTQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGGFG~K~~~~~~~~~~aAlaA~~~gRPVK~~~t 833 (1335)
T 3zyv_A 754 VRVVPKGEDKEMDIYVSSQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAAQKTGRPIRFILE 833 (1335)
T ss_dssp EEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEESCCSCCTTTTSSHHHHHHHHHHHHHHHHCSCEEEECC
T ss_pred eEEEEECCCCeEEEEECCcCHHHHHHHHHHHHCCCCceEEEEeCCccCCCCccccCchHHHHHHHHHHHHhCCCEEEEEC
Confidence 999998 5788999999999999999999999999999999999999999999876666778899999999999999999
Q ss_pred hhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhhccccCCCcccCcEEEEEEEeecCCCCC
Q 001024 853 RKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSR 931 (1185)
Q Consensus 853 Reed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ 931 (1185)
|+|+|.++++||++.++|++|+|+||+|+|++++++.|+|+|.+++. ++.....+..++|++||++++++.|+||++|+
T Consensus 834 R~E~~~~~~~R~~~~~~~~~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~ 913 (1335)
T 3zyv_A 834 RRDDMLITGGRHPLLGKYKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRVRGRVCKTNLPSN 913 (1335)
T ss_dssp HHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCC
T ss_pred HHHHHhhcCCCCchheEEEEEecCCCCeeeeeeeeeeccccccccccchhhhhhhhccCcceeeEEEEEEEEEeccCCCC
Confidence 99999999999999999999999999999999999999999999876 55556667789999999999999999999999
Q ss_pred CccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHH
Q 001024 932 SAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEM 1010 (1185)
Q Consensus 932 ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~ 1010 (1185)
+||||||.||++|++|++||++|++|||||+|||++|++++++.+ +.|.++++ .+.+||+++++.++|.+|+++
T Consensus 914 ~a~RG~G~pq~~fa~E~~mD~lA~~lg~DP~elR~~N~~~~~~~~-----~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~ 988 (1335)
T 3zyv_A 914 TAFRGFGFPQGAFVTETCMSAVAAKCRLPPEKVRELNMYRTIDRT-----IHNQEFDPTNLLQCWEACVENSSYYNRKKA 988 (1335)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHBCCSSCBC-----TTSCBC--CCHHHHHHHHHHHTTHHHHHHH
T ss_pred CcccCCCchhheeEecchhhHHHHHhCCCHHHHHHHhccCCCccc-----cCCcccccccHHHHHHHHHHhhhHHHHHHh
Confidence 999999999999999999999999999999999999999987543 34555544 899999999999999999999
Q ss_pred HHHHHhcCCcceeeeeeeceeeccccc-----ccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCC
Q 001024 1011 IKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTG 1085 (1185)
Q Consensus 1011 ~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~ 1085 (1185)
.++||+.++|+|||++++++.++.++. +..+.|+|++||+|+|.+|++|||||++|+++||||++|||
T Consensus 989 ~~~~~~~~~~~~rGi~~~~~~~~~g~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGi------- 1061 (1335)
T 3zyv_A 989 VDEFNQQRFWKKRGIAIIPMKFSVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKI------- 1061 (1335)
T ss_dssp HHHHHHHCSSSEEEEEEEEEEEECCCSSGGGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHHHHHTS-------
T ss_pred hhhhhccCcceeeeeEEEEEEeeccCCcccccceeEEEEEeCCCcEEEEECCcCCCCchhHHHHHHHHHHhCC-------
Confidence 999999999999999999988887654 46899999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccccCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCCCCeEEEE
Q 001024 1086 NLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQVHICSSEALSTE 1165 (1185)
Q Consensus 1086 ~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rL~~~aa~~~~~~~~~~~~~~v~~a~~~~v~l~a~~ 1165 (1185)
|+|+|+|..+||+.+|++++|+|||+++++|.||++||++|++||++++++.+ ..+|++++..++..+++|++++
T Consensus 1062 -p~e~I~v~~~DT~~~P~~~gt~gSr~t~~~G~Av~~Aa~~l~~rl~~~a~~~~----~~~~~~~~~~~~~~~v~l~a~~ 1136 (1335)
T 3zyv_A 1062 -PMSYIHLDEMSTVTVPNTVTTGASTGADVNGRAVQNACQILMKRLEPIIKQNP----SGTWEEWVKEAFVQSISLSATG 1136 (1335)
T ss_dssp -CGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHTTTHHHHST----TSCHHHHHHHHHHTTCCCEEEE
T ss_pred -CHHHEEEecCCcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----CCCHHHHHHHhhhcccceeEEE
Confidence 99999999999999999999999999999999999999999999999998754 5789999999999999999999
Q ss_pred EecCC
Q 001024 1166 FILFN 1170 (1185)
Q Consensus 1166 ~~~~~ 1170 (1185)
||..+
T Consensus 1137 ~~~~~ 1141 (1335)
T 3zyv_A 1137 YFRGY 1141 (1335)
T ss_dssp EECCC
T ss_pred EeccC
Confidence 99643
No 2
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=100.00 E-value=6.8e-223 Score=2157.42 Aligned_cols=1082 Identities=30% Similarity=0.508 Sum_probs=962.0
Q ss_pred CccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecC
Q 001024 2 EKSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEG 81 (1185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg 81 (1185)
+.+++-+||++||.-+. ++|||+||++|+||||||+|+++|+.++++++++|||||+|+++++|++|+||||
T Consensus 19 ~~~p~~~ll~~LR~~~~--------ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TiEg 90 (1332)
T 3unc_A 19 NADPETTLLAYLRRKLG--------LRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEG 90 (1332)
T ss_dssp TCCTTCBHHHHHHHTSC--------CTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGG
T ss_pred cCCCCCCHHHHHhhhcC--------CCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCCEEEEecc
Confidence 45688899999998888 8899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHH
Q 001024 82 LGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIAD 161 (1185)
Q Consensus 82 ~~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~ 161 (1185)
|++.++.|||||+||+++|++|||||||||||++|+||++ ++.| |++||+++|+|||||||||++|++
T Consensus 91 l~~~~~~~hpvq~a~~~~~~~QCG~CtpG~vms~~~ll~~-----~~~p-------~~~~i~~~l~gnlCRCtgy~~i~~ 158 (1332)
T 3unc_A 91 IGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN-----QPEP-------TVEEIEDAFQGNLCRCTGYRPILQ 158 (1332)
T ss_dssp TCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHTTTTCCCSSSCSHHHHH
T ss_pred ccCCCCCcCHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh-----cCCC-------CHHHHHHHHhCCcccCCCchhHHH
Confidence 9975568999999999999999999999999999999965 4666 499999999999999999999999
Q ss_pred HHHHhhhcccccc---cCCcccccCCC-Cc-------ccccCCCCCCCCCCCccCCCcchhc---ccCccccccC-CcEE
Q 001024 162 ACKSFAADVDIED---LGINSFWAKGE-SK-------EVKISRLPPYKHNGELCRFPLFLKK---ENSSAMLLDV-KGSW 226 (1185)
Q Consensus 162 a~~~~~~~~~~~~---~~~~~c~~~~~-~~-------~~~~~~~~~~~~~~~~~~~p~~l~~---~~~~~~~~~~-~~~~ 226 (1185)
|++.++.+.++|. .+.. ||+++. .+ .+..++|++|+++++. ||||+|+. ....++.+.+ +|+|
T Consensus 159 a~~~~~~~~~~c~~~~~g~~-cc~~~~~~~~~~~~~~~~~~~~~~~~d~~~e~-ifpp~L~~~~~~~~~~l~~~~~~~~~ 236 (1332)
T 3unc_A 159 GFRTFAKNGGCCGGNGNNPN-CCMNQKKDHTVTLSPSLFNPEEFMPLDPTQEP-IFPPELLRLKDVPPKQLRFEGERVTW 236 (1332)
T ss_dssp HHGGGC-----------------------------CCSCCGGGSCCCCGGGSC-CCCHHHHHHTTSCCCCEEEECSSCEE
T ss_pred HHHHHhhcCCcccccccCCc-cccccccccccccccccccccccCCCCccccc-cCCHHHhhhccccCCceEecCCceEE
Confidence 9999998765543 3333 444321 11 1345678899999865 99999982 2344577777 8999
Q ss_pred EecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-ccc-cCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHHHH
Q 001024 227 HSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEA 304 (1185)
Q Consensus 227 ~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~ 304 (1185)
++|+||+||+++|++ ++++++|||||+|++ +|. ...++++|||++|+||+.|+.++++|+|||+|||++|++.
T Consensus 237 ~~P~sl~ea~~ll~~-----~~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl~~l~~~ 311 (1332)
T 3unc_A 237 IQASTLKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACALSSVEKT 311 (1332)
T ss_dssp EECCSHHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBHHHHHHH
T ss_pred EccCCHHHHHHHHhh-----CCCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChHHHHHHH
Confidence 999999999999994 589999999999999 554 3578999999999999999999999999999999999998
Q ss_pred HHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEechh-
Q 001024 305 LKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEE- 383 (1185)
Q Consensus 305 ~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vpl~d- 383 (1185)
+.....+++++..+.+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+||++|
T Consensus 312 l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~---sD~~~~LlAl~A~v~l~~~~G~R~ipl~d~ 388 (1332)
T 3unc_A 312 LLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSRGTRRTVPMDHT 388 (1332)
T ss_dssp HHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTT---CSSHHHHHHTTCEEEEEETTEEEEEECCGG
T ss_pred HHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCc---hhHHHHHHHcCCEEEEEeCCCcEEEEhHHh
Confidence 77655555556678899999999999999999999999999999998 99999999999999999999999999999
Q ss_pred hccC---CCCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceeeeeE
Q 001024 384 FLER---PPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCR 460 (1185)
Q Consensus 384 F~~~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~~~r 460 (1185)
||.+ +.|+++|||++|+||.+.. +.++.+||+++| +++|||+||+|+++++++ ++++|+++|
T Consensus 389 Ff~g~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~A~V~~A~~v~~~~----~~~~i~~~r 453 (1332)
T 3unc_A 389 FFPSYRKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQP----GSMQVKELA 453 (1332)
T ss_dssp GCCSTTCCSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEEST----TSSBEEEEE
T ss_pred hhhccccccCCCCcEEEEEEecCCCC----------CcceEEEEEecC-CCCCcceEEEEEEEEEcC----CCCeEEEEE
Confidence 9984 5899999999999998765 456778999999 699999999999999963 237999999
Q ss_pred EEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCC-cCCC-CCcHHHHHHHHHHHHHHHHHHHHhhhcCCCc
Q 001024 461 LAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVV-PEDG-TSIPAYRSSLAVGFLYEFFGSLTEMKNGISR 538 (1185)
Q Consensus 461 ia~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~-p~~~-~~sa~YR~~la~~l~~r~l~~~~~~~~~~~~ 538 (1185)
|+||||+++ |+|++++|++|.||+|+++++++|++.+.+++. |.++ .+|++||++|+.+||+|||+++.++++.. +
T Consensus 454 Ia~Ggva~~-p~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~~~~~d~~gs~eYR~~La~~ll~r~l~~v~~~~~~~-~ 531 (1332)
T 3unc_A 454 LCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKLGKD-S 531 (1332)
T ss_dssp EEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred EEEECCCCc-cccHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcccccCCHHHHHHHHHHHHHHHHHHHHhhhccc-c
Confidence 999999999 999999999999999999999999999999995 5555 48999999999999999999999987431 0
Q ss_pred cccCCCCCCCccccccccccccccccccccccCCccccccc----cCCCCCCCCCcccccchhhhccccccccccCCCCC
Q 001024 539 DWLCGYSNNVSLKDSHVQQNHKQFDESKVPTLLSSAEQVVQ----LSREYYPVGEPITKSGAALQASGEAIYVDDIPSPI 614 (1185)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~----~~~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~ 614 (1185)
. .+.+.+++.. .+ ....+++|+|++.|.|+ +.+++++|||+++|+|+..||||+++|++|++.+|
T Consensus 532 ~--~~~~~~~~~~-------~s--~~~~~~~~~~~g~q~~~~~~~~~~~~~~iG~~v~R~d~~~kvtG~a~Y~~Di~~~p 600 (1332)
T 3unc_A 532 K--DKCGKLDPTY-------TS--ATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYE 600 (1332)
T ss_dssp --------CCTTT-------GG--GGCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHHTCSCCGGGSCCBT
T ss_pred c--cccCCCChhh-------cc--ccccccCCCCCceeeeecccccccccCcCCCCCcCcchHHhcccccccccccCCCC
Confidence 0 0111122211 11 24678999999999998 46788999999999999999999999999997458
Q ss_pred CcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCC-CCccccCCcccccCCceeecCCeEEEEEECCH
Q 001024 615 NCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI-GSKTIFGSEPLFADELTRCAGQPVAFVVADSQ 693 (1185)
Q Consensus 615 gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~-~~~~~~~~~~~~a~~~V~y~GqpVa~VVAes~ 693 (1185)
||||++|||||++||+|+|||+++|++||||++|+|++|+| +.|. + ...++|+|++++|||+|||||+|||+|+
T Consensus 601 gmL~a~~vrSp~aha~I~sID~s~A~~~pGV~~V~t~~Dip--~~~~~g---~~~d~~~la~~~Vry~GqpVa~VvA~t~ 675 (1332)
T 3unc_A 601 NELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNETG---LFNDETVFAKDTVTCVGHIIGAVVADTP 675 (1332)
T ss_dssp TCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEES---TTSCEESSCCSEECSTTCEEEEEEESSH
T ss_pred CcEEEEEEeCCCCCeeEeeechHHHhcCCCEEEEEeccccC--CcccCC---CCCCcccccCceEEEcCCeEEEEEECCH
Confidence 99999999999999999999999999999999999999999 5442 2 3468999999999999999999999999
Q ss_pred HHHHHhcccceEEEecCCCCCccCCHHHHhhcCCCcccCCccccCCCCChhcccccCCeeEEEEEEEeccccCCCcCCCc
Q 001024 694 KNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQT 773 (1185)
Q Consensus 694 ~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~ 773 (1185)
|+|++|+++|+|+| |++ |+++|+++|+++++++... .....||++++|++|+++ ||++|++++|+|+||||++
T Consensus 676 ~~A~~Aa~~v~Vey--e~l-p~v~~~~~A~~~~~~~~~~---~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~H~~mEp~~ 748 (1332)
T 3unc_A 676 EHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGSE---LKIEKGDLKKGFSEADNV-VSGELYIGGQDHFYLETHC 748 (1332)
T ss_dssp HHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEEE---EEEEESCHHHHHHHCSEE-EEEEEEECCBCCCCSSCCE
T ss_pred HHHHHHhhcCceEE--EcC-CCcCCHHHHhhccCccCCc---cccccCCHhHHhhcCCeE-eeeeEEeCCccccCCCCce
Confidence 99999999999999 888 8999999999987754211 135789999999999995 9999999999999999999
Q ss_pred eEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeC
Q 001024 774 ALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVK 852 (1185)
Q Consensus 774 avA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~s 852 (1185)
|+|+|+ +||+|+||+|||+|+.+|..||++||||++||||+++++|||||+|......+++.||++|+++||||||+||
T Consensus 749 ~~A~~~~~~g~l~v~~sTQ~p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVk~~~t 828 (1332)
T 3unc_A 749 TIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLD 828 (1332)
T ss_dssp EEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSCEEEECC
T ss_pred EEEEEeCCCCeEEEEECCCCHHHHHHHHHHHhCCCchhEEEEeCCCCCCCCCCCcccchHHHHHHHHHHHhCCCEEEEec
Confidence 999998 7788999999999999999999999999999999999999999999875556678899999999999999999
Q ss_pred hhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhhccccCCCcccCcEEEEEEEeecCCCCC
Q 001024 853 RKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSR 931 (1185)
Q Consensus 853 Reed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ 931 (1185)
|+|||.++++||++.++||+|+|+||+|+||+++++.|+|+|.+++. ++...+.++.++|+|||++++++.|+||+|++
T Consensus 829 R~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ 908 (1332)
T 3unc_A 829 RNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSN 908 (1332)
T ss_dssp HHHHHHHSCCBCCEEEEEEEEECTTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECSSCCC
T ss_pred HHHHHhhcCCCCceeEEEEEEECCCCcEEEEEEEEEEcCCcCccccHHHHHHHHHhcCCCccCCcEEEEEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999998764 45556667789999999999999999999999
Q ss_pred CccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHH
Q 001024 932 SAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEM 1010 (1185)
Q Consensus 932 ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~ 1010 (1185)
+||||||.+|++|++|++|||+|++|||||+|||++|++++++. ++.|+++++ .+++||++++++++|++|+++
T Consensus 909 ~a~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~g~~-----t~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~ 983 (1332)
T 3unc_A 909 TAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDL-----THFNQRLEGFSVPRCWDECLKSSQYYARKSE 983 (1332)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCB-----CTTCCBCCSCCHHHHHHHHHHHTTHHHHHHH
T ss_pred CcccCCCcHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCCCCc-----CCCCcccCCCCHHHHHHHHHHhcCHHHHHHH
Confidence 99999999999999999999999999999999999999987754 345666554 899999999999999999999
Q ss_pred HHHHHhcCCcceeeeeeeceeeccccc-----ccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCC
Q 001024 1011 IKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTG 1085 (1185)
Q Consensus 1011 ~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~ 1085 (1185)
++.||++++|++||+|++++.||+++. +..|.|+|++||+|+|.+|++|||||++|+++||||++|||
T Consensus 984 ~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGi------- 1056 (1332)
T 3unc_A 984 VDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKI------- 1056 (1332)
T ss_dssp HHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS-------
T ss_pred HHHhhhcCCcceeeEEEEEEEeeeeccCCCCCcceEEEEEcCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCC-------
Confidence 999999999999999999999988753 57899999999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCCCcccccCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCCCCeEEEE
Q 001024 1086 NLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQMGNVEWETLIQQVHICSSEALSTE 1165 (1185)
Q Consensus 1086 ~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rL~~~aa~~~~~~~~~~~~~~v~~a~~~~v~l~a~~ 1165 (1185)
|+|+|+|..+||+.+||+++|+|||+|+++|.||++||++|++||++++++. .+.+|++++..+|..+++|++++
T Consensus 1057 -p~e~V~v~~~DT~~~P~~~~t~aSr~t~~~G~Av~~A~~~l~~rl~~~aa~~----~~~~~~~~~~~a~~~~~~l~~~~ 1131 (1332)
T 3unc_A 1057 -PISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKN----PDGSWEDWVMAAYQDRVSLSTTG 1131 (1332)
T ss_dssp -CGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC----TTSCHHHHHHHHHHTTCCCEEEE
T ss_pred -CHHHEEEEcCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----CCCCHHHHHHHhhccCCceEEEE
Confidence 9999999999999999999999999999999999999999999999999864 35799999999999999999999
Q ss_pred EecCC
Q 001024 1166 FILFN 1170 (1185)
Q Consensus 1166 ~~~~~ 1170 (1185)
||+.+
T Consensus 1132 ~~~~~ 1136 (1332)
T 3unc_A 1132 FYRTP 1136 (1332)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99754
No 3
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=100.00 E-value=1.4e-141 Score=1353.98 Aligned_cols=551 Identities=21% Similarity=0.216 Sum_probs=492.0
Q ss_pred CCCCCcccccchhhhccccccccccC---CCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCC
Q 001024 585 YPVGEPITKSGAALQASGEAIYVDDI---PSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 661 (1185)
Q Consensus 585 ~~iG~~~~r~d~~~kvtG~a~Y~~Di---~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~ 661 (1185)
++|||+++|+|+..||||+++|++|+ . +|||||+++||||++||+|+|||+++|++||||++|+|++|+|......
T Consensus 174 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~-~~gmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p~~~~~~ 252 (907)
T 1vlb_A 174 RIWGSKYPRPTAVAKVTGTLDYGADLGLKM-PAGTLHLAMVQAKVSHANIKGIDTSEALTMPGVHSVITHKDVKGKNRIT 252 (907)
T ss_dssp CCTTSCCCCTTHHHHHTTCSCCHHHHHHTS-CTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCCSCSEEC
T ss_pred ccCCCcCccccchhhcCCceeeecccCcCC-CCCCeEEEEEecCCCCeEEEEechhHHhcCCCeEEEEEcccCccccccc
Confidence 57999999999999999999999999 6 7999999999999999999999999999999999999999998311111
Q ss_pred CCc------cccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCCC--cccCC
Q 001024 662 GSK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPS 733 (1185)
Q Consensus 662 ~~~------~~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~~~ 733 (1185)
+.. ....++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++ |+..+
T Consensus 253 g~~~~~~~~~~~~~~~~la~~~Vr~~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~ 329 (907)
T 1vlb_A 253 GLITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKVDL--EEL-PAYMSGPAAAAEDAIEIHPGTP 329 (907)
T ss_dssp CSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHSTTCCCSSTTSC
T ss_pred CccccccccccCCCchhccCCeEEEcCCeEEEEEECCHHHHHHHhcceEEEE--EcC-CCCCCHHHHHhhcCcccccccc
Confidence 110 0135789999999999999999999999999999999999999 888 899999999998874 33212
Q ss_pred cc---ccCCCCChhccc-ccCCeeEEEEEEEeccccCCCcCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCc
Q 001024 734 FL---YPKPVGDISKGM-NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEH 809 (1185)
Q Consensus 734 ~~---~~~~~Gdv~~af-~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~ 809 (1185)
|+ .....||++++| ++|+++ ||++|++++|+|+||||++|+|+|++||+|+||+|||+|+.+|..||++||||++
T Consensus 330 n~~~~~~~~~Gd~~~af~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~ 408 (907)
T 1vlb_A 330 NVYFEQPIVKGEDTGPIFASADVT-VEGDFYVGRQPHMPIEPDVAFAYMGDDGKCYIHSKSIGVHLHLYMIAPGVGLEPD 408 (907)
T ss_dssp SEEEEEEEEESSCHHHHHHHCSEE-EEEEEEECCCCCCCSSCCEEEEEECTTSCEEEEESCSCHHHHHHHHHHHHTCCGG
T ss_pred ccccccccccCChhhhhcccCCeE-EEEEEEECCccccCCCCCeEEEEEcCCCcEEEEECCcChHHHHHHHHHHhCCChh
Confidence 43 234689999999 999985 9999999999999999999999999767899999999999999999999999999
Q ss_pred cEEEEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEe
Q 001024 810 NVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILI 889 (1185)
Q Consensus 810 kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~ 889 (1185)
||||+++++|||||+|.... .++.||++|+++||||||+|||+|+|.++++||++.+++|+|+|+||+|+|++++++.
T Consensus 409 ~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~ 486 (907)
T 1vlb_A 409 QLVLVANPMGGTFGYKFSPT--SEALVAVAAMATGRPVHLRYNYQQQQQYTGKRSPWEMNVKFAAKKDGTLLAMESDWLV 486 (907)
T ss_dssp GEEEEECCCSCCTTGGGSCS--SHHHHHHHHHHHSSCEEEECCHHHHHHSSCBCCCEEEEEEEEECTTCCEEEEEEEEEE
T ss_pred hEEEEeCcCCCCCCCCcccc--HHHHHHHHHHHhCCCEEEEechHHHhhccCCCCceEEEEEEEECCCCCEEEEEEEEEE
Confidence 99999999999999998744 3678899999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCc-chhhhccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhh
Q 001024 890 DAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNIN 968 (1185)
Q Consensus 890 d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N 968 (1185)
|+|+|.+++. ++.....+..++|+|||++++++.|+||++|++||||||.+|++|++|++|||+|++|||||+|||++|
T Consensus 487 d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N 566 (907)
T 1vlb_A 487 DHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAPQSMFASECLMDMLAEKLGMDPLELRYKN 566 (907)
T ss_dssp ECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred cCCcccccchHHHHHHHhccCCCcCCCcEEEEEEEEcCCCCCCcccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHh
Confidence 9999998765 434445667799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHHhcCCcceeeeeeeceeeccccc---ccceEEE
Q 001024 969 LHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR---STPGKVS 1044 (1185)
Q Consensus 969 l~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~---~~~a~V~ 1044 (1185)
++++++. ++.|..+++ ++.+||++++++ |++|+++.+.| ..++| +||+|++++.++.++. ...|.|+
T Consensus 567 ~~~~~~~-----~~~g~~~~~~~~~~~l~~~~~~--w~~r~~~~~~~-~~g~~-~rGiGiA~~~~~~g~~~~~~~~a~v~ 637 (907)
T 1vlb_A 567 AYRPGDT-----NPTGQEPEVFSLPDMIDQLRPK--YQAALEKAQKE-STATH-KKGVGISIGVYGSGLDGPDASEAWAE 637 (907)
T ss_dssp BCCTTCC-----CTTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHHH-CCSSE-EEEEEEEEEEEESSSTTTCEEEEEEE
T ss_pred cCCCCCc-----CCCCccccCccHHHHHHHHHHH--HHHhhhhhhhc-cCCCc-eeEEEEEEEEeccccCCCCCccEEEE
Confidence 9987753 234544433 799999999999 99887776666 45667 6888888888887743 4789999
Q ss_pred EeeCCcEEEEECCcCCCCcchhHHHHHHHHHh---cccccCCCCCCCCcEEEEcCCCcccccCccCccchhhHHHHHHHH
Q 001024 1045 ILSDGSVVVEVGGIEMGQGLWTKVKQMAAFAL---SSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVR 1121 (1185)
Q Consensus 1045 v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~L---gi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~ 1121 (1185)
|++||+|+|.+|++|||||++|+++||+|++| || |+|+|+|..+||+.+|++++|+|||+|+++|+||+
T Consensus 638 l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gi--------p~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av~ 709 (907)
T 1vlb_A 638 LNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGV--------APEKIKFTWPNTATTPNSGPSGGSRQQVMTGNAIR 709 (907)
T ss_dssp ECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTC--------CGGGEEECCCBTTTSCCCCCSCTTCHHHHHHHHHH
T ss_pred EeCCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCC--------CHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHH
Confidence 99999999999999999999999999999999 99 99999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCCCCeEEEEEecC
Q 001024 1122 DCCNILVERLTLLRERLQGQMGNVEWETLIQQVHICSSEALSTEFILF 1169 (1185)
Q Consensus 1122 ~Ac~~L~~rL~~~aa~~~~~~~~~~~~~~v~~a~~~~v~l~a~~~~~~ 1169 (1185)
+||++|++||+++|+++ ++|+|++..++ .++++++|..
T Consensus 710 ~Aa~~l~~~l~~~aa~~------l~~~el~~~~~----~~~~~~~~~~ 747 (907)
T 1vlb_A 710 VACENLLKACEKPGGGY------YTYDELKAADK----PTKITGNWTA 747 (907)
T ss_dssp HHHHHHHHHHBCTTSSB------CCHHHHHHTTC----CCEEEEEEEC
T ss_pred HHHHHHHHHHHHHhhcc------CCHHHHHhhcc----cccccceecC
Confidence 99999999999988743 59999998654 5666676654
No 4
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=100.00 E-value=2.4e-140 Score=1342.61 Aligned_cols=552 Identities=21% Similarity=0.210 Sum_probs=488.0
Q ss_pred CCCCCcccccchhhhcccccccccc--CCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCCC
Q 001024 585 YPVGEPITKSGAALQASGEAIYVDD--IPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIG 662 (1185)
Q Consensus 585 ~~iG~~~~r~d~~~kvtG~a~Y~~D--i~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~~ 662 (1185)
++|||+++|+|+..||||+++|++| ++.+|||||+++||||++||+|+|||+++|++||||++|+|++|+|......+
T Consensus 174 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~~gmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p~~~~~~g 253 (907)
T 1dgj_A 174 RIWGSSIPRPSAVAKVTGLAEFGADAALRMPENTLHLALAQAKVSHALIKGIDTSEAEKMPGVYKVLTHKDVKGKNRITG 253 (907)
T ss_dssp CCTTSCCCCTTHHHHHHTCCCBHHHHGGGSCTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECGGGCCSCSEECC
T ss_pred cccCCCCCCcchhhhcCCceEeecCcCccCCCCCeEEEEEecCCCCEEEEeCChHHHhcCCCcEEEEEcccCCccccccC
Confidence 5699999999999999999999999 82279999999999999999999999999999999999999999983111111
Q ss_pred Cc------cccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCCC--cccCCc
Q 001024 663 SK------TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSF 734 (1185)
Q Consensus 663 ~~------~~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~~~~ 734 (1185)
.. ....++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++ |+..+|
T Consensus 254 ~~~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvAet~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~n 330 (907)
T 1dgj_A 254 LITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKFDL--ELL-PEYMSAPEAMAPDAIEIHPGTPN 330 (907)
T ss_dssp SSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHSTTCCCSBTTBCS
T ss_pred ccccccccccCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccEEEE--EcC-CCCCCHHHHHhhcCccccccccc
Confidence 10 0135789999999999999999999999999999999999999 888 899999999998874 331123
Q ss_pred c---ccCCCCChhccc--ccCCeeEEEEEEEeccccCCCcCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCC-C
Q 001024 735 L---YPKPVGDISKGM--NEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIP-E 808 (1185)
Q Consensus 735 ~---~~~~~Gdv~~af--~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp-~ 808 (1185)
+ .....||++++| ++|+++ ||++|++++|+|+||||++|+|+|++||+|+||+|||+|+.+|..||++|||| +
T Consensus 331 ~~~~~~~~~Gd~~~af~~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~ 409 (907)
T 1dgj_A 331 VYYDQLEEKGEDTVPFFNDPANVV-AEGSYYTQRQPHLPIEPDVGYGYINEQGQVVIHSKSVAIHLHALMIAPGLGLEFP 409 (907)
T ss_dssp EEEEEEEEESSCSHHHHSCTTSEE-EEEEEEECCCCCCCSSCCEEEEEECTTSCEEEEECCSCHHHHHHHHHHHHTCCTT
T ss_pred ccceeccccCChhhhhcccCCCEE-EEEEEEECCccccCCCCCeEEEEEcCCCcEEEEECCcCHHHHHHHHHHHhCCCCC
Confidence 3 224689999999 999985 99999999999999999999999997778999999999999999999999999 9
Q ss_pred ccEEEEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEE
Q 001024 809 HNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNIL 888 (1185)
Q Consensus 809 ~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~ 888 (1185)
+||||+++++|||||+|.... .++.||++|+++||||||+|||+|+|.++++||++.+++|+|+|+||+|+|++++++
T Consensus 410 ~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~ 487 (907)
T 1dgj_A 410 KDLVLVQNTTGGTFGYKFSPT--MEALVGVAVMATGRPCHLRYNYEQQQNYTGKRSPFWTTMRYAADRQGKILAMETDWS 487 (907)
T ss_dssp TTEEEEECBCSCCTTGGGSCS--SHHHHHHHHHHHCSCEEEECCHHHHHHSSCBCCCEEEEEEEEECTTSCEEEEEEEEE
T ss_pred ccEEEEeCCCCCCCCCCcccc--HHHHHHHHHHHhCCCEEEEeehHHHhhhcCCCCceEEEEEEEECCCCCEEEEEEEEE
Confidence 999999999999999998744 367889999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCCCCc-chhhhccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHh
Q 001024 889 IDAGLSPDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNI 967 (1185)
Q Consensus 889 ~d~Ga~~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~ 967 (1185)
.|+|+|.+++. ++.....++.++|+|||++++++.|+||++|++||||||.+|++|++|++|||+|++|||||+|||++
T Consensus 488 ~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~ 567 (907)
T 1dgj_A 488 VDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGAPESEFPSEVLMDELAEKLGMDPFELRAL 567 (907)
T ss_dssp EECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred EcCCcccccchHHHHHHHHhcCCCcCCCcEEEEEEEEcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 99999998765 43444566779999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHHhcCCcceeeeeeeceeeccccc---ccceEE
Q 001024 968 NLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR---STPGKV 1043 (1185)
Q Consensus 968 Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~---~~~a~V 1043 (1185)
|++++++. ++.|..+++ ++++||++++++ |++|+++.+.| ..++| +||+|++++.++.++. ...|.|
T Consensus 568 N~~~~~~~-----~~~g~~~~s~~~~~~l~~~~~~--w~~r~~~~~~~-~~g~~-~rG~Gia~~~~~~g~~~~~~~~a~v 638 (907)
T 1dgj_A 568 NCYREGDT-----TSSGQIPEVMSLPEMFDKMRPY--YEESKKRVKER-STAEI-KRGVGVALGVYGAGLDGPDTSEAWV 638 (907)
T ss_dssp HBCCTTCC-----CTTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHTT-CCSSE-EEEEEEEEEEEEESSSSSCEEEEEE
T ss_pred hcCCCCCc-----CCCCccccCccHHHHHHHHHHH--HHhhhhhhhcc-cCCCe-eEEEEEEEEEecccCCCCCCccEEE
Confidence 99987754 234544433 799999999999 98877666555 45667 6788888887777643 478999
Q ss_pred EEeeCCcEEEEECCcCCCCcchhHHHHHHHHHh---cccccCCCCCCCCcEEEEcCCCcccccCccCccchhhHHHHHHH
Q 001024 1044 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFAL---SSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVV 1120 (1185)
Q Consensus 1044 ~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~L---gi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av 1120 (1185)
+|++||+|+|.+|++|||||++|+++||+|++| || |+|+|+|..+||+.+|++++|+|||+|+++|+||
T Consensus 639 ~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gi--------p~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~Av 710 (907)
T 1dgj_A 639 ELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGI--------TPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNAI 710 (907)
T ss_dssp EECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTC--------CGGGEEEEESBTTTSCCCCCSCTTCTTTHHHHHH
T ss_pred EEeCCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCC--------CHHHEEEecCCCCCCCCCCCCccchHHHHHHHHH
Confidence 999999999999999999999999999999999 99 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHhCCCCeEEEEEecC
Q 001024 1121 RDCCNILVERLTLLRERLQGQMGNVEWETLIQQVHICSSEALSTEFILF 1169 (1185)
Q Consensus 1121 ~~Ac~~L~~rL~~~aa~~~~~~~~~~~~~~v~~a~~~~v~l~a~~~~~~ 1169 (1185)
++||++|++||+++++++ ++|+|+. . ++.-+.+.++|..
T Consensus 711 ~~Aa~~l~~~l~~~aa~~------l~~~~l~-~---~g~~~~~~~~~~~ 749 (907)
T 1dgj_A 711 RVACEMLIEGMRKPGGGF------FTPAEMK-A---EGRPMRYDGKWTA 749 (907)
T ss_dssp HHHHHHHHHHTBCSSSSB------CCHHHHH-H---TTCCCEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhhhc------CCHHHHh-h---CCeEEEecceeec
Confidence 999999999999988754 3899998 2 2322455666653
No 5
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=100.00 E-value=7e-118 Score=1116.97 Aligned_cols=558 Identities=34% Similarity=0.553 Sum_probs=514.5
Q ss_pred CCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCCCCc
Q 001024 585 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 664 (1185)
Q Consensus 585 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~~~~ 664 (1185)
++|||+++|+|++.||||+++|++|++.+|||||++++|||++||+|+|||+++|++||||++|+|++|+| +.|.. .
T Consensus 1 ~~iG~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~~-g 77 (755)
T 3nvz_C 1 DTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIP--GSNET-G 77 (755)
T ss_dssp CCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCS--SCSEE-S
T ss_pred CCCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEECCCCCeEEEEeehHHHhcCCCeEEEEEcCCCC--ccccC-C
Confidence 47999999999999999999999999745899999999999999999999999999999999999999999 44421 1
Q ss_pred cccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCCCcccCCccccCCCCChh
Q 001024 665 TIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDIS 744 (1185)
Q Consensus 665 ~~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~ 744 (1185)
...++|+|++++|||+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++... . .....||++
T Consensus 78 -~~~~~~~la~~~Vry~Gq~Va~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~a~~~~~~~~~-~--~~~~~Gd~~ 150 (755)
T 3nvz_C 78 -LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTY--EDL-PAIITIEDAIKNNSFYGS-E--LKIEKGDLK 150 (755)
T ss_dssp -TTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEE--EEC-CCCCSHHHHHHTTCEEEE-E--EEEEESCHH
T ss_pred -CCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccceEE--EcC-CCCCCHHHHhhccCccCC-C--cccccCCHh
Confidence 236899999999999999999999999999999999999999 888 899999999998764321 1 135789999
Q ss_pred cccccCCeeEEEEEEEeccccCCCcCCCceEEEEC-CCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCC
Q 001024 745 KGMNEADHRILAAEIKLGSQYYFYMETQTALAVPD-EDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFG 823 (1185)
Q Consensus 745 ~af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~-~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG 823 (1185)
++|++|+++ ||++|++++|+|+||||++|+|+|+ +||+|+||+|||+|+.+|..||++||||++||||+++++|||||
T Consensus 151 ~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG 229 (755)
T 3nvz_C 151 KGFSEADNV-VSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFG 229 (755)
T ss_dssp HHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTT
T ss_pred HHhhcCCeE-EEEEEEeCCccccCCCCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHHCCCCccEEEEECCCCCCCC
Confidence 999999985 9999999999999999999999998 67789999999999999999999999999999999999999999
Q ss_pred CCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chh
Q 001024 824 GKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMP 902 (1185)
Q Consensus 824 gK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~ 902 (1185)
+|......+++.||++|+++||||||+|||+|||+++++||++.+++|+|+|+||+|+||+++++.|+|+|.+++. ++.
T Consensus 230 ~K~~~~~~~~~~aa~aA~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~ 309 (755)
T 3nvz_C 230 GKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIME 309 (755)
T ss_dssp TTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCTTHHHHHH
T ss_pred CcccccchHHHHHHHHHHHhCCCEEEEecHHHHHhhcCCCCceEEEEEEEECCCCcEEEEEEEEEEccCcCcCccHHHHH
Confidence 9986544567889999999999999999999999999999999999999999999999999999999999998764 444
Q ss_pred hhccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCcccccccC
Q 001024 903 SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSLNLFYESS 982 (1185)
Q Consensus 903 ~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~Nl~~~~~~~~~~~~~ 982 (1185)
....++.++|+|||++++++.|+||+|+++||||||.+|++|++|++|||+|++|||||+|||++|++++++. ++
T Consensus 310 ~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~-----~~ 384 (755)
T 3nvz_C 310 RALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDL-----TH 384 (755)
T ss_dssp HHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCB-----CT
T ss_pred HHHHhcCCCccCCcEEEEEEEEeCCCCCCCcccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCc-----CC
Confidence 5566778999999999999999999999999999999999999999999999999999999999999987643 34
Q ss_pred CCccccC-CHHHHHHHHHHhCCchhHHHHHHHHHhcCCcceeeeeeeceeeccccc-----ccceEEEEeeCCcEEEEEC
Q 001024 983 AGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STPGKVSILSDGSVVVEVG 1056 (1185)
Q Consensus 983 ~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~a~V~v~~DGsV~V~~g 1056 (1185)
.|.++++ .+++||++++++++|++|+++.+.||++++|++||+|++++.+++++. +..|.|+|++||+|+|.+|
T Consensus 385 ~g~~~~s~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DG~v~v~~g 464 (755)
T 3nvz_C 385 FNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHG 464 (755)
T ss_dssp TCCBCTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEES
T ss_pred CCccccCCCHHHHHHHHHHhcCHHHHHHHHHhhhccCCccceeEEEEEEEecccccCCCCCcceEEEEEecCCeEEEEEC
Confidence 5666554 899999999999999999998889999999999999999988887753 4789999999999999999
Q ss_pred CcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcccccCccCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001024 1057 GIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRE 1136 (1185)
Q Consensus 1057 ~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rL~~~aa 1136 (1185)
++|||||++|+++||+|++||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++||++||+||+++++
T Consensus 465 ~~e~GQG~~T~~aQiaAe~Lgi--------~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa 536 (755)
T 3nvz_C 465 GTEMGQGLHTKMVQVASKALKI--------PISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKK 536 (755)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTS--------CGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCC--------CHHHEEEECCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999 99999999999999999999999999999999999999999999999998
Q ss_pred HHhCCCCCCCHHHHHHHHHhCCCCeEEEEEecCC
Q 001024 1137 RLQGQMGNVEWETLIQQVHICSSEALSTEFILFN 1170 (1185)
Q Consensus 1137 ~~~~~~~~~~~~~~v~~a~~~~v~l~a~~~~~~~ 1170 (1185)
+. .+.+|++++..+|..+++|++++||..+
T Consensus 537 ~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 566 (755)
T 3nvz_C 537 KN----PDGSWEDWVMAAYQDRVSLSTTGFYRTP 566 (755)
T ss_dssp HC----TTSCHHHHHHHHHHTTCCCEEEEEEECS
T ss_pred hC----CCCCHHHHHHHhhccccceEEEEEEecC
Confidence 64 3579999999999999999999999754
No 6
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=100.00 E-value=8.1e-116 Score=1102.73 Aligned_cols=564 Identities=31% Similarity=0.438 Sum_probs=515.2
Q ss_pred CCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCCCCcc
Q 001024 586 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSKT 665 (1185)
Q Consensus 586 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~~~~~ 665 (1185)
+|||+++|+|+..||||+++|++|++.+|||||++++|||++||+|+|||+++|++||||++|+|++|+| +.|. ...
T Consensus 2 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~-~g~ 78 (777)
T 2w3s_B 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLP--HDND-ASP 78 (777)
T ss_dssp CTTSCCCCTTHHHHHHTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEEEGGGCS--SCCC-CCS
T ss_pred CCCCCCCCcchHHhccccceeccccCCCCCCEEEEEEECCCCCeEEEEeEhHHHhcCCCcEEEEEcccCC--Cccc-CCC
Confidence 5899999999999999999999999437999999999999999999999999999999999999999999 4332 112
Q ss_pred ccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCCCcccCCccccCCCCChhc
Q 001024 666 IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSLFEVPSFLYPKPVGDISK 745 (1185)
Q Consensus 666 ~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~~~~~~~~~~~~~Gdv~~ 745 (1185)
...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++....... .....||+++
T Consensus 79 ~~~~~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~V~y--e~l-p~v~~~~~a~~~~~~~~~~~--~~~~~Gd~~~ 153 (777)
T 2w3s_B 79 APSPEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITY--APR-PAILTLDQALAADSRFEGGP--VIWARGDVET 153 (777)
T ss_dssp SSSCCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHHTCBSSSSC--EEEEESCHHH
T ss_pred CCCCcccccCceEEecCCeEEEEEECCHHHHHHHhcceEEEE--EcC-CCCCCHHHHhhccCccccCc--cccccCChhH
Confidence 246899999999999999999999999999999999999999 888 89999999998854221111 1346899999
Q ss_pred ccccCCeeEEEEEEEeccccCCCcCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEcccCCCCCCC
Q 001024 746 GMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITRRVGGAFGGK 825 (1185)
Q Consensus 746 af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFGgK 825 (1185)
+|++|+++ ||++|++++|+|+||||++|+|+|++|+ |+||+|||+|+.+|..||++||||++||||+++++|||||+|
T Consensus 154 a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~-l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K 231 (777)
T 2w3s_B 154 ALAGAAHL-AEGCFEIGGQEHFYLEGQAALALPAEGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGK 231 (777)
T ss_dssp HHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEEETTE-EEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTT
T ss_pred HhhcCCeE-EEEEEEECCccccCCcCCeEEEEEECCc-cEEEECCcCHHHHHHHHHHHHCCCHHHEEEEeCCCCCCCCcC
Confidence 99999986 9999999999999999999999999776 999999999999999999999999999999999999999999
Q ss_pred CccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCCCCc-chhhh
Q 001024 826 AIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPDVSP-IMPSN 904 (1185)
Q Consensus 826 ~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~~s~-~~~~~ 904 (1185)
.+...+.++.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|++|+++++.|+|+|.+++. ++...
T Consensus 232 ~~~~~~~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~ 311 (777)
T 2w3s_B 232 ESQGNHLAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRA 311 (777)
T ss_dssp TTTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCCCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchhHHHHH
Confidence 86556678899999999999999999999999999999999999999999999999999999999999988765 44555
Q ss_pred ccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCC------------
Q 001024 905 MIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTH------------ 972 (1185)
Q Consensus 905 ~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~Nl~~~------------ 972 (1185)
+.+..++|+|||++++++.|+||+++++||||||.+|++|++|++|||+|++|||||+|||++|++++
T Consensus 312 ~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~~~~~~~ 391 (777)
T 2w3s_B 312 MLHADGSYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSP 391 (777)
T ss_dssp HHTTTTTBCCSSEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTBCCCC-----------
T ss_pred HHhcCCccccCCEEEEEEEEeCCCCCCCccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhccCccccccccccccc
Confidence 56678999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ------CCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHHhcCCcceeeeeeeceeeccccc-----ccc
Q 001024 973 ------KSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR-----STP 1040 (1185)
Q Consensus 973 ------~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~-----~~~ 1040 (1185)
++ |+.++.|..+++ ++++||+++++.++|++|+++++.||+.++|++||+||++..|+.++. +..
T Consensus 392 ~~~~~~~~---p~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~ 468 (777)
T 2w3s_B 392 PEPIATKK---TQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAG 468 (777)
T ss_dssp ------CC---CCBCTTCCBCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHTCSSEEEEEEEEEEEEECSCSSGGGCEEE
T ss_pred ccccCCCC---CccCCCCccccCCCHHHHHHHHHHhcCHHHHHHHHHHhhcCCCCeeEEEEEEEeeEccccccccCCCCc
Confidence 52 244566766554 799999999999999999888889999888889999999999988752 478
Q ss_pred eEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcccccCccCccchhhHHHHHHH
Q 001024 1041 GKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVV 1120 (1185)
Q Consensus 1041 a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av 1120 (1185)
|.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.+|++++|+|||+|+++|+||
T Consensus 469 a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av 540 (777)
T 2w3s_B 469 ALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGI--------DPVQVRITATDTSKVPNTSATAASSGADMNGMAV 540 (777)
T ss_dssp EEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHH
T ss_pred eEEEEccCCeEEEEECCccCCCChhHHHHHHHHHHHCC--------CHHHEEEEcCCCCCCCCCCCCccchHHHHHHHHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCC---------------CCCCCHHHHHHHHHhCCCCeEEEEEecCC
Q 001024 1121 RDCCNILVERLTLLRERLQGQ---------------MGNVEWETLIQQVHICSSEALSTEFILFN 1170 (1185)
Q Consensus 1121 ~~Ac~~L~~rL~~~aa~~~~~---------------~~~~~~~~~v~~a~~~~v~l~a~~~~~~~ 1170 (1185)
++||++||+||+++++++++. +..++|.|++..+|..+++|++++||..+
T Consensus 541 ~~Aa~~l~~~l~~~aa~~~~~~~~~l~~~~g~v~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~ 605 (777)
T 2w3s_B 541 KDACETLRGRLAGFVAAREGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATGFYATP 605 (777)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCEEETTEEEETTEEEEHHHHHHHHHHTTCCCEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHEEEECCEEEECCCcccHHHHHHHhhhcCcceEEEEEEeCC
Confidence 999999999999999998742 12479999999999999999999999864
No 7
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=100.00 E-value=1.2e-113 Score=1083.14 Aligned_cols=559 Identities=22% Similarity=0.255 Sum_probs=500.1
Q ss_pred CCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCC
Q 001024 582 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 661 (1185)
Q Consensus 582 ~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~ 661 (1185)
.++++|||+++|+|+..||||+++|++|+. +|||||+++||||++||+|+|||+++|++||||++|+|++|+| + |.
T Consensus 6 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~~gmL~a~~vrSp~aharI~siD~s~A~~~pGV~~V~t~~Dip--~-~~ 81 (769)
T 1rm6_A 6 PQHGTVGVRTPLVDGVEKVTGKAKYTADIA-APDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETP--V-PF 81 (769)
T ss_dssp ---CCTTSCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCC--S-CB
T ss_pred cccCcCCCCCcCcchHHhccceeeehhccC-CCCCEEEEEEECCCCCeEEEeeehhHHhcCCCeEEEEehHHcC--C-cc
Confidence 457899999999999999999999999996 7999999999999999999999999999999999999999999 3 33
Q ss_pred CCccccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCCC--ccc-CCcc---
Q 001024 662 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEV-PSFL--- 735 (1185)
Q Consensus 662 ~~~~~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~-~~~~--- 735 (1185)
+......++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|++++++ |+. +.|+
T Consensus 82 g~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~A~~~v~Vey--e~l-p~v~~~~~al~~~a~~~~~~~~~n~~~~ 158 (769)
T 1rm6_A 82 GVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDY--EVL-PAYMTPKAAMKAGAIALHDDKPNNILRE 158 (769)
T ss_dssp CSSTTCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCSHHHHHSTTCCCSSTTCTTSEEEE
T ss_pred CCCCCCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhCCCeEEE--eeC-CCCCCHHHHhccCCceeccCCCCccccc
Confidence 2211146889999999999999999999999999999999999999 888 899999999998874 432 1343
Q ss_pred ccCCCCChhcccccCCeeEEEEEEEeccccCCCcCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEE
Q 001024 736 YPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVRVI 814 (1185)
Q Consensus 736 ~~~~~Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~ 814 (1185)
.....||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||++||||++||||+
T Consensus 159 ~~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~ 237 (769)
T 1rm6_A 159 VHAEFGDVAAAFAEADLI-REKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVI 237 (769)
T ss_dssp EEEEESCHHHHHHTCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEE
T ss_pred cccccCChhhhhccCCEE-EEEEEEECCccccCCCCceEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHEEEE
Confidence 234689999999999985 99999999999999999999999986 6799999999999999999999999999999999
Q ss_pred EcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCC
Q 001024 815 TRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLS 894 (1185)
Q Consensus 815 ~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~ 894 (1185)
++++|||||+|..... .++.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|++++++++.|+|+|
T Consensus 238 ~~~vGGgFG~K~~~~~-~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay 316 (769)
T 1rm6_A 238 KPFLGGGFGARTEALH-FEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAY 316 (769)
T ss_dssp CCBCCCCTTTTSSCCH-HHHHHHHHHHHHTSEEEEECCHHHHHHHCCCBCEEEEEEEEEECTTSCEEEEEEEEEEECCSS
T ss_pred eCCCCCCCCCcccccc-HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCCEEEEEEEEECCCCeEEEEEEEEEEeCCcC
Confidence 9999999999987432 478899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCc-chhhhccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCC
Q 001024 895 PDVSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHK 973 (1185)
Q Consensus 895 ~~~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~Nl~~~~ 973 (1185)
.+++. ++.....++.++|+|||++++++.|+||++|++||||||.+|++|++|++||++|++|||||+|||++|+++++
T Consensus 317 ~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~ 396 (769)
T 1rm6_A 317 AGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQI 396 (769)
T ss_dssp CTTHHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHTBCSSS
T ss_pred cccchHHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCccccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCC
Confidence 88765 43444566779999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHHhcCCcceeeeeeeceeeccccc---------ccceEE
Q 001024 974 SLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR---------STPGKV 1043 (1185)
Q Consensus 974 ~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~---------~~~a~V 1043 (1185)
+. | ++.|..+++ ++++||++++++++|++|+++. .+| ||+|++++.++.++. ...|.|
T Consensus 397 ~~--~--~~~g~~~~s~~~~~~l~~~~~~~~w~~r~~~~------~~g--rG~Gia~~~~~~g~~~~~~~~~~~~~~a~v 464 (769)
T 1rm6_A 397 PY--V--TMYAQRVMSYGVPECLEKVKAASGWEERKGKL------PKG--RGLGIALSHFVSGTSTPKHWTGEPHATVNL 464 (769)
T ss_dssp SE--E--CTTCCEECCCCHHHHHHHHHHHHTHHHHTTCS------CTT--EEEEEEEEEEESSCSSCSSCCCCCSEEEEE
T ss_pred CC--c--CCCCccccCCCHHHHHHHHHHhCCchhhhhhh------ccC--ceEEEEEEEEecccCccccccCCCCccEEE
Confidence 53 1 345655444 7999999999999998764322 123 777777777776532 378999
Q ss_pred EEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcccccCccCccchhhHHHHHHHHHH
Q 001024 1044 SILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASCQVVRDC 1123 (1185)
Q Consensus 1044 ~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g~Av~~A 1123 (1185)
+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.+|++++|+|||+|+++|+||++|
T Consensus 465 ~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgi--------p~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~A 536 (769)
T 1rm6_A 465 KLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGV--------RLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISA 536 (769)
T ss_dssp EECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHH
T ss_pred EEeCCCeEEEEECCccCCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCC------------------CCCCCHHHHHHHHHhCCCCeEEEEEecC
Q 001024 1124 CNILVERLTLLRERLQGQ------------------MGNVEWETLIQQVHICSSEALSTEFILF 1169 (1185)
Q Consensus 1124 c~~L~~rL~~~aa~~~~~------------------~~~~~~~~~v~~a~~~~v~l~a~~~~~~ 1169 (1185)
|++||+||+++|+++++. +..++|.|++..+|..+++|.+.++|..
T Consensus 537 a~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~ 600 (769)
T 1rm6_A 537 AEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTC 600 (769)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCHHHeEEeCCEEEEccCCCCccCHHHHHHhhhhcccccccccceec
Confidence 999999999999998751 1348999999999988899999888864
No 8
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=100.00 E-value=2.2e-113 Score=1083.92 Aligned_cols=569 Identities=19% Similarity=0.197 Sum_probs=506.5
Q ss_pred CCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCCC
Q 001024 583 EYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIG 662 (1185)
Q Consensus 583 ~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~~ 662 (1185)
.++.|||+++|+|+..||||+++|++|++ +|||||++++|||++||+|+|||+++|++||||++|+|++|+| +.+.+
T Consensus 14 ~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p--~~~~~ 90 (803)
T 1ffv_B 14 ALAGMGASRLRKEDARFIQGKGNYVDDIK-MPGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLK--PLKLH 90 (803)
T ss_dssp HHTCTTCCCCCSSHHHHTTTCCCCGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHG--GGTCS
T ss_pred hhccCCCCCcCcChHhhcccceecccccC-CCCCEEEEEEeCCCCCeEEEEeehHHHhcCCCeEEEEehhhcc--Ccccc
Confidence 34579999999999999999999999997 7999999999999999999999999999999999999999998 32221
Q ss_pred Ccc--ccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCC--Cccc-CC----
Q 001024 663 SKT--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEV-PS---- 733 (1185)
Q Consensus 663 ~~~--~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~--~~~~-~~---- 733 (1185)
... ...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.
T Consensus 91 ~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~ 167 (803)
T 1ffv_B 91 WMPTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEY--DEL-PVVIDPIDALKPDAPVLREDLAGKTSG 167 (803)
T ss_dssp EEECTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHTSTTCCCSCGGGTTCCEE
T ss_pred cccccCCCccccccCceEEEcCCcEEEEEECCHHHHHHHhcCCEEEE--eeC-CccCCHHHHhhcCCceecccccccccc
Confidence 110 113578999999999999999999999999999999999999 888 89999999999886 3432 11
Q ss_pred --------cc---ccCCC-CChhcccccCCeeEEEEEEEeccccCCCcCCCceEEEECC-CCcEEEEeCCCChHHHHHHH
Q 001024 734 --------FL---YPKPV-GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATI 800 (1185)
Q Consensus 734 --------~~---~~~~~-Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~v 800 (1185)
|+ ..... ||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..|
T Consensus 168 ~~~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~l 246 (803)
T 1ffv_B 168 AHGPREHHNHIFTWGAGDKAATDAVFANAPVT-VSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVV 246 (803)
T ss_dssp TTEECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHH
T ss_pred cccccccccccccccccccCChhhhhccCCEE-EEEEEEECCEeccCCCCceEEEEEeCCCceEEEEECCCCHHHHHHHH
Confidence 32 12357 9999999999985 99999999999999999999999985 67999999999999999999
Q ss_pred HHHhCCCCccEEEEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcE
Q 001024 801 ARCLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKI 880 (1185)
Q Consensus 801 A~~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i 880 (1185)
|++||||++||||+++++|||||+|... ....+.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|
T Consensus 247 A~~Lglp~~~VrV~~~~vGGgFG~K~~~-~~~~~~aa~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i 325 (803)
T 1ffv_B 247 SMLSGIPESKVRIVSPDIGGGFGNKVGI-YPGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKI 325 (803)
T ss_dssp HHHHCCCGGGEEEECCCCSCCTTTTSSC-CHHHHHHHHHHHHHTSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCE
T ss_pred HHHhCCCHHHEEEEeCCCCCCCCccccc-cHHHHHHHHHHHHhCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCCE
Confidence 9999999999999999999999999864 344578999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEeeCCCCCC-CCc-chhhhccc-cCCCcccCcEEEEEEEeecCCCCCC-ccCCCCh-hHHHHHHHHHHHHHHH
Q 001024 881 TALQLNILIDAGLSPD-VSP-IMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRS-AMRAPGE-VQGSFIAEAVIEHVAS 955 (1185)
Q Consensus 881 ~a~~~~~~~d~Ga~~~-~s~-~~~~~~~~-~~~~Y~ipn~~~~~~~v~TN~~~~g-a~Rg~G~-~q~~fa~E~~mDelA~ 955 (1185)
++++++++.|+|+|.. ++. +..+...+ ..++|+|||++++++.|+||++|++ ||||||. +|++|++|++|||+|+
T Consensus 326 ~a~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~g~a~Rg~G~~~q~~fa~E~~mDelA~ 405 (803)
T 1ffv_B 326 LGLRVNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYXXSFRVTEAVYLIERMVDVLAQ 405 (803)
T ss_dssp EEEEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEecCCcccccccchhHHHHHHhhcCCCccCCcEEEEEEEEEcCCCCCccceeccCCCchhHHHHHHHHHHHHH
Confidence 9999999999999965 665 33323333 4689999999999999999999999 9999999 9999999999999999
Q ss_pred HcCCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHHHHHHhcCC-cceeeeeeeceeec
Q 001024 956 TLSMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMIKEFNRSNL-WRKKGVCRLPIVHE 1033 (1185)
Q Consensus 956 ~lG~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~~~~n~~~~-~~~rGia~~~~~~~ 1033 (1185)
+|||||+|||++|++++++ +||.++.|..+++ ++++||++++++++|++++++..++|+.++ |++||+||+++.++
T Consensus 406 ~lG~DP~e~R~~N~~~~~~--~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~g~~~~~rGiG~a~~~~~ 483 (803)
T 1ffv_B 406 KLNMDKAEIRAKNFIRKEQ--FPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEV 483 (803)
T ss_dssp HHTCCTTHHHHHHBCCGGG--CSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCSEEEEEEEEEEECC
T ss_pred HHCcCHHHHHHHhCCCCCc--CccccCCCcccCCccHHHHHHHHHHHCCchhHHHHhHhhhccCCCcceEEEEEEEEEEe
Confidence 9999999999999998764 3566677776655 899999999999999987777788888888 57899999988887
Q ss_pred cccc------------ccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCccc
Q 001024 1034 VTLR------------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSV 1101 (1185)
Q Consensus 1034 ~~~~------------~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~~ 1101 (1185)
.++. ...|.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.+
T Consensus 484 ~g~~~~~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------~~e~V~v~~~DT~~~ 555 (803)
T 1ffv_B 484 VGAGPSKMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGI--------PSEVIQVEEGDTSTA 555 (803)
T ss_dssp BCCCCTTTCEETTEESCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEECCBTTTS
T ss_pred ccccccccccccccCCcccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCC--------CHHHEEEecCCCCCC
Confidence 7643 37899999999999999999999999999999999999999 999999999999999
Q ss_pred ccCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------CCCCCHHHHHHHHHhC---CC-
Q 001024 1102 IQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQ------------------MGNVEWETLIQQVHIC---SS- 1159 (1185)
Q Consensus 1102 p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rL~~~aa~~~~~------------------~~~~~~~~~v~~a~~~---~v- 1159 (1185)
|++++|+|||+|+++|+||++||++||+||+++++++++. +..++|.|++..+|.. ++
T Consensus 556 p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~a~~~~~~~~~ 635 (803)
T 1ffv_B 556 PYGLGTYGSRSTPVAGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLE 635 (803)
T ss_dssp CCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHHHHHHHHCCCTTCC
T ss_pred CCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEcCCCCCccCHHHHHHHHHhccCcccc
Confidence 9999999999999999999999999999999999998741 2347999999988632 23
Q ss_pred -CeEEEEEecC
Q 001024 1160 -EALSTEFILF 1169 (1185)
Q Consensus 1160 -~l~a~~~~~~ 1169 (1185)
.|+++++|..
T Consensus 636 ~gl~~~~~~~~ 646 (803)
T 1ffv_B 636 PGLEAVHYYDP 646 (803)
T ss_dssp SSEEEEEEECC
T ss_pred cceeeeeeecC
Confidence 6799888854
No 9
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=100.00 E-value=2.4e-112 Score=1076.59 Aligned_cols=567 Identities=21% Similarity=0.231 Sum_probs=500.6
Q ss_pred CCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCCCCc
Q 001024 585 YPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNIGSK 664 (1185)
Q Consensus 585 ~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~~~~ 664 (1185)
+.|||+++|+|+..||||+++|++|++ +|||||+++||||++||+|+|||+++|++||||++|+|++|+| +.|....
T Consensus 19 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aha~I~sID~s~A~~~PGV~~V~t~~D~p--~~~~~~~ 95 (809)
T 1n62_B 19 QGMGCKRKRVEDIRFTQGKGNYVDDVK-LPGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLK--PLNLHYM 95 (809)
T ss_dssp TCTTCCCCCTHHHHHTTTCCCBGGGCC-CTTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHG--GGTCSEE
T ss_pred ccCCCCCcCcchHHhccceeeehhhcC-CCCCEEEEEEeCCCCceEEEecchHHHhhCCCeEEEEEhHHcc--ccccccc
Confidence 359999999999999999999999997 7999999999999999999999999999999999999999998 4332111
Q ss_pred c--ccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCC--Cccc-CC------
Q 001024 665 T--IFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS--LFEV-PS------ 733 (1185)
Q Consensus 665 ~--~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~--~~~~-~~------ 733 (1185)
. ...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.
T Consensus 96 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~~i~~~~~~~~~~~~ 172 (809)
T 1n62_B 96 PTLAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDY--EPL-PVLVDPFKAMEPDAPLLREDIKDKMTGAH 172 (809)
T ss_dssp ECTTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCGGGTTSTTCCCCCGGGTTCCEETT
T ss_pred cccCCCCcccccCceEEEcCCcEEEEEECCHHHHHHHhCcceEEE--EeC-CCcCCHHHHhhcCCceecccccccccccc
Confidence 1 113678999999999999999999999999999999999999 888 89999999999876 3432 11
Q ss_pred ------cc---ccCCC-CChhcccccCCeeEEEEEEEeccccCCCcCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHH
Q 001024 734 ------FL---YPKPV-GDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIAR 802 (1185)
Q Consensus 734 ------~~---~~~~~-Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA~ 802 (1185)
|+ ..... ||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||+
T Consensus 173 ~~~~~~n~~~~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~ 251 (809)
T 1n62_B 173 GARKHHNHIFRWEIGDKEGTDATFAKAEVV-SKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSL 251 (809)
T ss_dssp EECSSTTEEEEEEEECHHHHHHHHHHCSEE-EEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHH
T ss_pred cccccccccccccccccCChhhhhccCCEE-EEEEEEECCEeccCCCCceEEEEEeCCCCeEEEEECCcChHHHHHHHHH
Confidence 32 12457 9999999999985 99999999999999999999999985 6799999999999999999999
Q ss_pred HhCCCCccEEEEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEE
Q 001024 803 CLGIPEHNVRVITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITA 882 (1185)
Q Consensus 803 ~Lglp~~kV~V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a 882 (1185)
+||||++||||+++++|||||+|... ....+.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|+|
T Consensus 252 ~Lglp~~~VrV~~~~vGGgFG~K~~~-~~~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a 330 (809)
T 1n62_B 252 ISGLPEHKIHVIAPDIGGGFGNKVGA-YSGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILA 330 (809)
T ss_dssp HHCCCGGGEEEECCBCSCCTTTTSSC-CHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEE
T ss_pred HhCCCHHHEEEEeCCCCCCCcccccc-chHHHHHHHHHHHhCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCcEEE
Confidence 99999999999999999999999864 34457899999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeeCCCCCC-CCc-chhhhccc-cCCCcccCcEEEEEEEeecCCCCCC-ccCCCCh-hHHHHHHHHHHHHHHHHc
Q 001024 883 LQLNILIDAGLSPD-VSP-IMPSNMIG-ALKKYDWGALHFDIKVCRTNLPSRS-AMRAPGE-VQGSFIAEAVIEHVASTL 957 (1185)
Q Consensus 883 ~~~~~~~d~Ga~~~-~s~-~~~~~~~~-~~~~Y~ipn~~~~~~~v~TN~~~~g-a~Rg~G~-~q~~fa~E~~mDelA~~l 957 (1185)
++++++.|+|+|.. ++. +....+.+ ..++|+|||++++++.|+||++|++ ||||||. +|++|++|++||++|++|
T Consensus 331 ~~~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~g~a~Rg~G~~~q~~fa~E~~mDelA~~l 410 (809)
T 1n62_B 331 MRCHVLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRL 410 (809)
T ss_dssp EEEEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCcCcccccchhhhhhhhhhcCCCcCCCcEEEEEEEEECCCCCCCCEecCCCccHHHHHHHHHHHHHHHHHH
Confidence 99999999999965 665 33323233 4689999999999999999999999 9999999 999999999999999999
Q ss_pred CCCHHHHHHhhcCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCchhHHHHH----HHHHhcCCcceeeeeeeceee
Q 001024 958 SMEVDFVRNINLHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFNQRTEMI----KEFNRSNLWRKKGVCRLPIVH 1032 (1185)
Q Consensus 958 G~DP~e~R~~Nl~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~~r~~~~----~~~n~~~~~~~rGia~~~~~~ 1032 (1185)
||||+|||++|++++++ +||.++.|..+++ ++++||++++++++|++++++. ..||...+|++||+|++++.+
T Consensus 411 G~DP~e~R~~N~~~~~~--~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~fn~g~~~~~rGiGia~~~~ 488 (809)
T 1n62_B 411 EMDSADLRIKNFIQPEQ--FPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTE 488 (809)
T ss_dssp TCCHHHHHHHHBCCGGG--CSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEEC
T ss_pred CcCHHHHHHHhccCCCC--CccccCCCcccCCCCHHHHHHHHHHHcCchhhHHhHHhhhhhhccCCCceeEEEEEEEEEE
Confidence 99999999999998764 3566777776655 8999999999999998643322 357754447789999988877
Q ss_pred ccccc------------ccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcc
Q 001024 1033 EVTLR------------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLS 1100 (1185)
Q Consensus 1033 ~~~~~------------~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~ 1100 (1185)
+.++. ...|.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+.
T Consensus 489 ~~g~~~~~~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~e~V~v~~~DT~~ 560 (809)
T 1n62_B 489 IVGAGPSKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGI--------PADDIMIEEGNTDT 560 (809)
T ss_dssp CBSCCCTTTCEETTEECCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEECCBTTT
T ss_pred eecccccccccccccCCcccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCC--------CHHHEEEecCCCCC
Confidence 66533 36799999999999999999999999999999999999999 99999999999999
Q ss_pred cccCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------------CCCCHHHHHHHHHhC---CC
Q 001024 1101 VIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQM------------------GNVEWETLIQQVHIC---SS 1159 (1185)
Q Consensus 1101 ~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rL~~~aa~~~~~~------------------~~~~~~~~v~~a~~~---~v 1159 (1185)
+|++++|+|||+|+++|+||++||++|++||+++++++++.. ..++|+|++..+|.. ++
T Consensus 561 ~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~~~~~~~~ 640 (809)
T 1n62_B 561 APYGLGTYGSRSTPTAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNL 640 (809)
T ss_dssp SCCCCCSCTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTS
T ss_pred CCCCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhccCccc
Confidence 999999999999999999999999999999999999987521 237899999988633 22
Q ss_pred --CeEEEEEecC
Q 001024 1160 --EALSTEFILF 1169 (1185)
Q Consensus 1160 --~l~a~~~~~~ 1169 (1185)
+|+++++|..
T Consensus 641 ~~~l~~~~~~~~ 652 (809)
T 1n62_B 641 EPGLEAVNYYDP 652 (809)
T ss_dssp CSSCEEEEEECC
T ss_pred cccceeeeeccC
Confidence 5799999864
No 10
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=100.00 E-value=4.5e-112 Score=1071.48 Aligned_cols=548 Identities=21% Similarity=0.227 Sum_probs=486.6
Q ss_pred CCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCC--CCC
Q 001024 586 PVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQN--IGS 663 (1185)
Q Consensus 586 ~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n--~~~ 663 (1185)
.|||+++|+|+..||||+++|++|+. +|||||++++|||++||+|+|||+++|++||||++|+|++|+| +.| .+.
T Consensus 13 ~iG~~~~R~d~~~kvtG~a~Y~~D~~-~pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p--~~~~~~~~ 89 (788)
T 1t3q_B 13 SIGTSVLRREDTRLLTGRGRYIADLV-LSGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVA--ELSQGIVA 89 (788)
T ss_dssp STTSCCCCTTHHHHHTTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHH--TTCCCEEE
T ss_pred cCCCCCcCcchHHhCccceecccccC-CCCCEEEEEEecCCCCEEEEEeEhHHHhhCCCeEEEEeHHHCc--ccccccCc
Confidence 69999999999999999999999996 7999999999999999999999999999999999999999998 332 111
Q ss_pred ccc-----cCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCC-Cccc-CCcc-
Q 001024 664 KTI-----FGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSS-LFEV-PSFL- 735 (1185)
Q Consensus 664 ~~~-----~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~-~~~~-~~~~- 735 (1185)
... ..+.|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++ +|+. +.|+
T Consensus 90 ~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Vey--e~l-p~v~~~~~Al~~~a~i~~~~~~n~~ 166 (788)
T 1t3q_B 90 TMQVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEY--EEL-PAVTGIEAALEGEARANDTLAGNVV 166 (788)
T ss_dssp CCSSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE--EEC-CCCCSHHHHHHCSCCSCTTSSSSEE
T ss_pred ccccccccCCccccccCCeEEEcCCeEEEEEECCHHHHHHHhCCCeEEE--eeC-CCcCCHHHHhhccCcccCCCCCccc
Confidence 000 12236799999999999999999999999999999999999 888 89999999999876 3432 2343
Q ss_pred --ccCCCCChhcccccCCeeEEEEEEEeccccCCCcCCCceEEEECC-CCcEEEEeCCCChHHHHHHHHHHhCCCCccEE
Q 001024 736 --YPKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDE-DNCLVVYSSIQCPESAHATIARCLGIPEHNVR 812 (1185)
Q Consensus 736 --~~~~~Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~-dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~ 812 (1185)
.....||++++|++|+++ ||++|++++|+|+||||++|+|+|++ ||+|+||+|||+|+.+|..||++||||++|||
T Consensus 167 ~~~~~~~Gd~~~afa~A~~v-ve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~Vr 245 (788)
T 1t3q_B 167 SRTSRARDELAPIFASSAGV-VRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIE 245 (788)
T ss_dssp EEEEEEECCCHHHHHHSSEE-EEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEE
T ss_pred cccccccCChhhhhccCCcE-EEEEEEECCEeccCCCCceEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCChHHEE
Confidence 234689999999999985 99999999999999999999999986 67999999999999999999999999999999
Q ss_pred EEEcccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCC
Q 001024 813 VITRRVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAG 892 (1185)
Q Consensus 813 V~~~~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~G 892 (1185)
|+++++|||||+|.... ..++.||++|+++||||||+|||+|+|+++++||++.+++|+|+|+||+|+|++++++.|+|
T Consensus 246 V~~~~vGGgFG~K~~~~-~~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~G 324 (788)
T 1t3q_B 246 VRVPDVGGGFGQKAHLH-PEELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGG 324 (788)
T ss_dssp EECCBCSCCTTTTSSCC-HHHHHHHHHHHHHTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCCEEEEEEEEEEECC
T ss_pred EEeCCCCCCCCCCCccc-hHHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCC
Confidence 99999999999998744 33788999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCc-chh-hhccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhh
Q 001024 893 LSPD--VSP-IMP-SNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNIN 968 (1185)
Q Consensus 893 a~~~--~s~-~~~-~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N 968 (1185)
+|.+ ++. ++. ....++.++|+|||++++++.|+||++|++||||||.+|++|++|++||++|++|||||+|||++|
T Consensus 325 ay~~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N 404 (788)
T 1t3q_B 325 AYNNLPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRN 404 (788)
T ss_dssp SSCCTTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTT
T ss_pred CCccccccchhHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCCcccCCcHHHHHHHHHHHHHHHHHHHCcCHHHHHHHh
Confidence 9987 665 333 455667799999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcccccccCCCccccC-CHHHHHHHHHHhCCch---hHHHHHHHHHhcCCcceeeeeeeceeeccccc-------
Q 001024 969 LHTHKSLNLFYESSAGEYAEY-TLPLIWDKLAVSSSFN---QRTEMIKEFNRSNLWRKKGVCRLPIVHEVTLR------- 1037 (1185)
Q Consensus 969 l~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~~~~~~~~---~r~~~~~~~n~~~~~~~rGia~~~~~~~~~~~------- 1037 (1185)
++++++ +||.++.|..+++ ++++||++++++++|+ +|+++.+ ..++|+ |+|++++.++.++.
T Consensus 405 ~~~~~~--~p~~~~~g~~~~s~~~~~~l~~~~~~~~w~~~~~r~~~~~---~~g~~~--G~GiA~~~~~~g~~~~~~~~~ 477 (788)
T 1t3q_B 405 VVMPED--FPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEAR---ARGKYL--GLGVSVFNEVTGTGTRTLSFL 477 (788)
T ss_dssp BCCGGG--CSEECTTSCEECSCCHHHHHHHHHHHHCHHHHHHHHHHHH---TTTEEE--EEEEEEEEEEESCCHHHHHHT
T ss_pred cCCCCC--ccccCCCCcccCCCCHHHHHHHHHHhcCCchhhhhhhhhh---ccCCeE--EEEEEEEEeccccCccccccc
Confidence 998764 3667777876654 8999999999999998 5544332 456564 55555555555422
Q ss_pred ------ccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcccccCccCccch
Q 001024 1038 ------STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGST 1111 (1185)
Q Consensus 1038 ------~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~ 1111 (1185)
...|.|+|++||+|+|.+|++|||||++|+++||+|++||| |+|+|+|..+||+ +|++++|+|||
T Consensus 478 ~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi--------p~~~V~v~~~DT~-~p~~~~t~aSr 548 (788)
T 1t3q_B 478 GTPTTTHDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGV--------PASDVVIQAGSTK-NTYGFGAYASR 548 (788)
T ss_dssp TCCCCCCBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTS--------CGGGEEEECSBTT-SCCBCCSCTTC
T ss_pred ccccCccccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCC--------CHHHEEEecCCCC-CCCCCCCccch
Confidence 47799999999999999999999999999999999999999 9999999999999 99999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCC------------------CCCCHHHHHHHHHhC
Q 001024 1112 TSEASCQVVRDCCNILVERLTLLRERLQGQM------------------GNVEWETLIQQVHIC 1157 (1185)
Q Consensus 1112 ~t~~~g~Av~~Ac~~L~~rL~~~aa~~~~~~------------------~~~~~~~~v~~a~~~ 1157 (1185)
+|+++|+||++||++||+||+++++++++.. ..++|.|++..+|..
T Consensus 549 ~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~ 612 (788)
T 1t3q_B 549 GAVIGAGSIGRAASIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFA 612 (788)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhc
Confidence 9999999999999999999999999887521 237899999988754
No 11
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1.9e-92 Score=835.52 Aligned_cols=405 Identities=25% Similarity=0.388 Sum_probs=368.3
Q ss_pred CCCCCCCCcccccchhhhccccccccccCCCCCCcEEEEEEecCCCCeEEeeccCccCCCCCCeEEEEEcCCCCCCCCCC
Q 001024 582 REYYPVGEPITKSGAALQASGEAIYVDDIPSPINCLYGAFIYSTKPLARIKGIEFKSESVPDVVTALLSYKDIPEGGQNI 661 (1185)
Q Consensus 582 ~~~~~iG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dip~~g~n~ 661 (1185)
++|++|||+++|+|++.||||+++|++|+. +|||||++++|||++||+|+|||+++|++||||++|+|++|+| +.|.
T Consensus 3 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~Di~-~pgmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p--~~~~ 79 (425)
T 3hrd_A 3 KDYQVLGKNKVKVDSLEKVMGTAKFAADYS-FPDMLYAGVFRSTVPHARIVSLDLSKARAIDGVEAVLDYHAIP--GKNR 79 (425)
T ss_dssp CCCSSTBCCCCCTTHHHHHHTCCCBGGGCC-CTTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCS--SCCC
T ss_pred CCCCccCCcCcCcchHHHCCCceecccccC-CCCCEEEEEEeCCCCCEEEEEeEhHHHhcCCCeEEEEEcccCC--CcCc
Confidence 578899999999999999999999999997 7899999999999999999999999999999999999999999 4442
Q ss_pred CCccccCCcccccCCceeecCCeEEEEEECCHHHHHHhcccceEEEecCCCCCccCCHHHHhhcCCC--cccCCcc---c
Q 001024 662 GSKTIFGSEPLFADELTRCAGQPVAFVVADSQKNADRAADVAVVDYEMGNLEPPILSVEEAVDRSSL--FEVPSFL---Y 736 (1185)
Q Consensus 662 ~~~~~~~~~~~~a~~~V~y~GqpVa~VVAes~~~A~~Aa~~V~Vey~~e~l~p~v~~~e~Al~~~~~--~~~~~~~---~ 736 (1185)
......++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+| |++ |+++|+++|+++++. ++ +.|+ .
T Consensus 80 -~~~~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~V~y--e~l-p~v~~~~~a~~~~a~~~~~-~~n~~~~~ 154 (425)
T 3hrd_A 80 -FGIIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEALDAITIEY--EEL-EGIFTMERALEEDSPAIHG-DTNIHQVK 154 (425)
T ss_dssp -BCSSSCCBCSSCSSCBCSTTCEEEEEEESSHHHHHHHHHHCEEEE--EEC-CCCCCHHHHHSTTSCCSST-TCSEEEEE
T ss_pred -CCCCCCccccccCceEEECCCeEEEEEECCHHHHHHHhcCCeEEE--EeC-CCCCCHHHHhhcCCccccC-CCcccccc
Confidence 112346899999999999999999999999999999999999999 788 899999999998874 33 2332 1
Q ss_pred cCCCCChhcccccCCeeEEEEEEEeccccCCCcCCCceEEEECCCCcEEEEeCCCChHHHHHHHHHHhCCCCccEEEEEc
Q 001024 737 PKPVGDISKGMNEADHRILAAEIKLGSQYYFYMETQTALAVPDEDNCLVVYSSIQCPESAHATIARCLGIPEHNVRVITR 816 (1185)
Q Consensus 737 ~~~~Gdv~~af~~a~~~vve~~~~~~~q~H~~mEp~~avA~~~~dg~l~V~~sTQ~p~~~r~~vA~~Lglp~~kV~V~~~ 816 (1185)
....||++++|++|+++ ||++|++|+|+|+||||++|+|+|++||+|+||+|||+|+.+|..||++||||++||+|+++
T Consensus 155 ~~~~Gd~~~a~a~A~~v-ve~~y~~~~~~H~~mEp~~~~A~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~ 233 (425)
T 3hrd_A 155 HLEYGDVDAAFKQCDIV-VEDTYSTHRLTHMFIEPDAGVSYYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQA 233 (425)
T ss_dssp EEEESCHHHHHHTCSEE-EEEEEEECCCCCCCSSCCEEEEEECTTCCEEEEECCSCHHHHHHHHHHHTTCCGGGEEEEEC
T ss_pred ccccCCHHHHhhcCceE-EEEEEEeCCccccCCCCceEEEEECCCCeEEEEECCCCHHHHHHHHHHHhCCChhhEEEEeC
Confidence 35689999999999985 99999999999999999999999997778999999999999999999999999999999999
Q ss_pred ccCCCCCCCCccccHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEEeCCCCcEEEEEEEEEeeCCCCCC
Q 001024 817 RVGGAFGGKAIKAMPVATACALAAYKLCRPVRIYVKRKTDMIMVGGRHPMKITYSVGFKSNGKITALQLNILIDAGLSPD 896 (1185)
Q Consensus 817 ~vGGgFGgK~~~~~~~~~~aAlaA~~~gRPVrl~~sReed~~~~~~R~~~~~~~k~g~~~dG~i~a~~~~~~~d~Ga~~~ 896 (1185)
++|||||+|.+.. ..+.||++|+++||||||+|||+|||+++++||++.+++|+|+|+||+|++|+++++.|+|+|.+
T Consensus 234 ~vGGgFG~K~~~~--~~~~aa~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~~~Ga~~~ 311 (425)
T 3hrd_A 234 TTGGGFGGKLDLS--VQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCKTGATKDGRLQAVQVEMFGDTGAYAS 311 (425)
T ss_dssp BCCCCTTTTSSCS--SHHHHHHHHHHHCSCEEEECCHHHHHHHSCBCCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCT
T ss_pred CCCCCCCCCcccC--HHHHHHHHHHHhCCCEEEEeehHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEccccccc
Confidence 9999999998744 34678999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCc-chhhhccccCCCcccCcEEEEEEEeecCCCCCCccCCCChhHHHHHHHHHHHHHHHHcCCCHHHHHHhhcCCCCCc
Q 001024 897 VSP-IMPSNMIGALKKYDWGALHFDIKVCRTNLPSRSAMRAPGEVQGSFIAEAVIEHVASTLSMEVDFVRNINLHTHKSL 975 (1185)
Q Consensus 897 ~s~-~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~Nl~~~~~~ 975 (1185)
++. ++.....+..++|+|||++++++.|+||+||++||||||.+|++|++|++|||+|++|||||+|||++|++++++.
T Consensus 312 ~~~~~~~~~~~~~~~~Y~ipn~~~~~~~v~tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~ 391 (425)
T 3hrd_A 312 YGPAVITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAK 391 (425)
T ss_dssp THHHHHHHHHHHTTCSBCCSCEEEEEEEEECSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHBCCTTCB
T ss_pred cchHHHHHHHhhcCCCccCCcEEEEEEEEECCCCCCCcccCCCchHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCc
Confidence 765 4444455677999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred ccccccCCCccc-cC-CHHHHHHHHHHhC
Q 001024 976 NLFYESSAGEYA-EY-TLPLIWDKLAVSS 1002 (1185)
Q Consensus 976 ~~~~~~~~g~~~-~~-~~~~~l~~~~~~~ 1002 (1185)
++.|.++ ++ ++.+||+++++++
T Consensus 392 -----~~~g~~~~~s~~~~~~l~~~~~~~ 415 (425)
T 3hrd_A 392 -----LATGQVLENSVGLIETLEKAREKA 415 (425)
T ss_dssp -----CTTSCBCCSCCCHHHHHHHHHHHH
T ss_pred -----CCCCCEECCCCCHHHHHHHHHHHH
Confidence 3456665 44 8999999998775
No 12
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=100.00 E-value=1.5e-93 Score=848.55 Aligned_cols=429 Identities=24% Similarity=0.388 Sum_probs=374.1
Q ss_pred CccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecC
Q 001024 2 EKSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEG 81 (1185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg 81 (1185)
+..++.++|++|| -++ ++|||.||++|.||||||+|+++| |+++||||++|+.+++|++|+||||
T Consensus 16 ~~~~~~~Ll~~Lr-~~~--------l~g~k~gC~~G~CGaCtV~v~~~~------~g~~v~sCl~~~~~~~g~~i~TiEg 80 (462)
T 2w3s_A 16 IEDPTQSLLEWLR-AEG--------LTGTKEGCNEGDCGACTVMIRDAA------GSRAVNACLMMLPQIAGKALRTIEG 80 (462)
T ss_dssp CSCTTCBHHHHHH-HTT--------CTTSCCSCSSSSSCTTEEEEEETT------EEEEEETTTCBGGGGTTCEEECGGG
T ss_pred cCCCCCcHHHHHH-HcC--------CCccCCCCCCCCcCCcEEEEEecC------CCeEEEchhhhHHHhCCCcEEEECC
Confidence 3457889999999 655 568999999999999999999987 6899999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHH
Q 001024 82 LGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIAD 161 (1185)
Q Consensus 82 ~~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~ 161 (1185)
|++.++.|||||++|+++|++|||||||||||++++|| + | |++||+++|+|||||||||++|++
T Consensus 81 l~~~~~~~~~~q~a~~~~~~~QCG~CtpG~im~~~~ll-~--------p-------~~~~i~~~l~gnlCRCtgy~~i~~ 144 (462)
T 2w3s_A 81 IAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAH-D--------R-------DRKDYDDLLAGNLCRCTGYAPILR 144 (462)
T ss_dssp TSCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHH-H--------T-------TCCCHHHHSTTCCCSSSCSHHHHH
T ss_pred CCCCCCCCCHHHHHHHHhCCCCCCCCcchHHHHHHHHH-C--------C-------CHHHHHHHHcCCcccCCCcHHHHH
Confidence 98645789999999999999999999999999999999 2 3 478999999999999999999999
Q ss_pred HHHHhhhcccccccCCcccccCCCCcccccCCCCCCCCCCCccCCCcchhcccCccccc--cC-CcEEEecCCHHHHHHH
Q 001024 162 ACKSFAADVDIEDLGINSFWAKGESKEVKISRLPPYKHNGELCRFPLFLKKENSSAMLL--DV-KGSWHSPISVQELRNV 238 (1185)
Q Consensus 162 a~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~--~~-~~~~~~P~sl~ea~~l 238 (1185)
|++.++.....+++ .. +.+.+ ...+.+ .+ ..+|++|+|++||+++
T Consensus 145 a~~~~~~~~~~~~~-------------~~------~~~~~-------------~~~~~~~~gG~a~~y~~P~sl~ea~~l 192 (462)
T 2w3s_A 145 AAEAAAGEPPADWL-------------QA------DAAFT-------------LAQLSSGVRGQTAPAFLPETSDALADW 192 (462)
T ss_dssp HHHHHHTSCCCHHH-------------HH------GGGCC--------------------------CCBCCSSHHHHHHH
T ss_pred HHHHHhhccccccc-------------cC------ccccc-------------ccceeEcCCCCccEEEecCCHHHHHHH
Confidence 99998731100000 00 00000 011122 22 3579999999999999
Q ss_pred HHhhcCCCCCCcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHHHHHHHhhhhhhhhh
Q 001024 239 LESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIEALKEETKEFHSEA 316 (1185)
Q Consensus 239 l~~~~~~~~~~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~~~~~~~~~~~~~~ 316 (1185)
+++ ++++++++|||+|++ +|.+ ..++++|||++|+||+.|+.++++|+|||++|+++|++++.
T Consensus 193 l~~-----~~~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vtl~~l~~~l~---------- 257 (462)
T 2w3s_A 193 YLA-----HPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGIGAGVTIAALRAFAE---------- 257 (462)
T ss_dssp HHH-----CTTCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEETTEEEEETTCBHHHHHHHHT----------
T ss_pred Hhh-----CCCCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEcCCEEEEccCCcHHHHHHHHH----------
Confidence 984 478999999999999 5653 47899999999999999999999999999999999998733
Q ss_pred HhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEechhhccCC---CCCCC
Q 001024 317 LMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLERP---PLDSR 393 (1185)
Q Consensus 317 ~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vpl~dF~~~~---~l~~~ 393 (1185)
+.+|.|+++++++||+||||+|||||||++++|. ||++++|+||||+|+|.+.+|.|++|++|||.++ .|+++
T Consensus 258 -~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~---sD~~~~L~ALdA~v~l~~~~G~R~vp~~dF~~g~~~t~L~~~ 333 (462)
T 2w3s_A 258 -GPHPALAGLLRRFASEQVRQVATIGGNIANGSPI---GDGPPALIAMGASLTLRRGQERRRMPLEDFFLEYRKQDRRPG 333 (462)
T ss_dssp -TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CSHHHHHHHTTCEEEEEBTTBCCCCBGGGGEEETTEESCCTT
T ss_pred -HHhHHHHHHHHHhCChhheeeEEcccccccCCCc---chHHHHHHHcCCEEEEEeCCceEEEEHHHhhcccccccCCCC
Confidence 3589999999999999999999999999999998 9999999999999999999999999999999854 79999
Q ss_pred ceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceeeeeEEEEcccCCCCccc
Q 001024 394 SILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIR 473 (1185)
Q Consensus 394 EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~r 473 (1185)
|||++|+||.+.. + +.+||+++| +++|||+||+|+.++++ +++|+++||+|||++++ |+|
T Consensus 334 Eii~~i~iP~~~~----------~--~~~~K~~~R-~~~d~a~v~~A~~~~~~------~~~i~~~ria~Ggva~~-p~r 393 (462)
T 2w3s_A 334 EFVESVTLPKSAP----------G--LRCYKLSKR-FDQDISAVCGCLNLTLK------GSKIETARIAFGGMAGV-PKR 393 (462)
T ss_dssp CEEEEEEEESCCS----------S--EEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEE
T ss_pred cEEEEEEEecCCC----------C--ceEEEEccc-cccchhheeEEEEEEEc------CCeEEEEEEEEEcCCCc-ceE
Confidence 9999999998764 2 567888888 68999999999999996 46999999999999999 999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHcccCCcCCCC-CcHHHHHHHHHHHHHHHHHHHHhh
Q 001024 474 ARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 532 (1185)
Q Consensus 474 a~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~sa~YR~~la~~l~~r~l~~~~~~ 532 (1185)
++++|++|.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++..+
T Consensus 394 a~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~rgs~~YR~~la~~l~~r~l~~~~~~ 453 (462)
T 2w3s_A 394 AAAFEAALIGQDFREDTIAAALPLLAQDFTPLSDMRASAAYRMNAAQAMALRYVRELSGE 453 (462)
T ss_dssp CHHHHHTTTTSBCSHHHHHHHGGGHHHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hHHHHHHhcCCCCCHHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999886 899999999999999999987543
No 13
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=100.00 E-value=5.3e-56 Score=503.56 Aligned_cols=293 Identities=22% Similarity=0.404 Sum_probs=264.3
Q ss_pred cccccC-CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-ccc-cCCCCeeEeCCCCCCCCceEEcCCeEEec
Q 001024 217 AMLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIG 293 (1185)
Q Consensus 217 ~~~~~~-~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IG 293 (1185)
++.+.+ .|+|++|+|++||+++|++ +++++++||||+|++ +|. ...++.+|||++|+||+.|+.++++|+||
T Consensus 3 ~l~~~g~~~~y~~P~sl~ea~~ll~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IG 77 (305)
T 3nvz_B 3 QLRFEGERVTWIQASTLKELLDLKAQ-----HPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFG 77 (305)
T ss_dssp CEEEECSSCEEEECCSHHHHHHHHHH-----CTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEE
T ss_pred ceEecCCCeEEEccCCHHHHHHHHHh-----CCCCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEc
Confidence 466667 8999999999999999984 578999999999998 554 36789999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeC
Q 001024 294 ATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTG 373 (1185)
Q Consensus 294 A~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~ 373 (1185)
|+||+++|++++...+..++....+++|.|++++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.
T Consensus 78 A~vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~---sD~~~~L~AldA~v~l~~~ 154 (305)
T 3nvz_B 78 AACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPI---SDLNPVFMASGTKLTIVSR 154 (305)
T ss_dssp TTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTT---CSSHHHHHHHTCEEEEEET
T ss_pred cCCcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCc---hHHHHHHHHcCCEEEEEcC
Confidence 9999999999876554444544567899999999999999999999999999999998 9999999999999999999
Q ss_pred CeeEEEech-hhccC---CCCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCc
Q 001024 374 QKCEKLMLE-EFLER---PPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCK 449 (1185)
Q Consensus 374 ~g~R~vpl~-dF~~~---~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~ 449 (1185)
+|+|+||++ |||.+ +.|.++|||++|+||.+.. +..+.+||+++| +++|||+||+|+.+++++
T Consensus 155 ~G~R~vp~~~df~~g~~~t~l~~~Eil~~I~iP~~~~----------~~~~~~~k~~~R-~~~d~a~v~~A~~~~~~~-- 221 (305)
T 3nvz_B 155 GTRRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE----------DEFFSAFKQASR-REDDIAKVTCGMRVLFQP-- 221 (305)
T ss_dssp TEEEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCCT----------TEEEEEEECSCC-CSSSSCCCEEEEEEEEST--
T ss_pred CCcEEEEeehHhhcCcccccCCCCcEEEEEEecCCCC----------CCceEEEEEEec-CCCChhheEEEEEEEEeC--
Confidence 999999998 89985 5899999999999998765 345678999998 699999999999999963
Q ss_pred CCCCceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCC-cCCC-CCcHHHHHHHHHHHHHHHHH
Q 001024 450 TGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVV-PEDG-TSIPAYRSSLAVGFLYEFFG 527 (1185)
Q Consensus 450 ~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~-p~~~-~~sa~YR~~la~~l~~r~l~ 527 (1185)
++++|+++||+|||++++ |+|++++|++|.|++|+++++++|++.+.+++. |.+| .+|++||++|+.+|++|||.
T Consensus 222 --~~~~i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~~~~~d~~~s~~YR~~la~~l~~r~l~ 298 (305)
T 3nvz_B 222 --GSMQVKELALCYGGMADR-TISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYL 298 (305)
T ss_dssp --TSSBEEEEEEEEESSSSS-CEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --CCCeEEEEEEEEEcccCc-EeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 237999999999999999 999999999999999999999999999999996 5665 48999999999999999999
Q ss_pred HHHhhh
Q 001024 528 SLTEMK 533 (1185)
Q Consensus 528 ~~~~~~ 533 (1185)
++.+++
T Consensus 299 ~~~~~l 304 (305)
T 3nvz_B 299 TVLKKL 304 (305)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998765
No 14
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1.2e-55 Score=498.31 Aligned_cols=278 Identities=21% Similarity=0.290 Sum_probs=254.2
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCC-CcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQI-SSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 299 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~-~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~ 299 (1185)
.|+|++|+||+||+++|+++ .+ +++++||||+|++ +|.+ ..|+++|||++|+||+.|+.++++|+|||+||++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~----~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY----KDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT----TTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred ceeEeCCCCHHHHHHHHHhC----CCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 58999999999999999964 22 5999999999998 6663 5799999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEE
Q 001024 300 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKL 379 (1185)
Q Consensus 300 ~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~v 379 (1185)
+|+++... .+++|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+|
T Consensus 79 ~l~~~~~~---------~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~---sD~~~~LlAldA~v~l~~~~g~R~v 146 (296)
T 3hrd_C 79 QIENHPFI---------RSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSVA---GDGVSAMTTLDATVVLESVRGTRQM 146 (296)
T ss_dssp HHHHCHHH---------HHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEEEEE
T ss_pred HHHhChhh---------hhHhHHHHHHHHHhCCHHHhcceehhhhhccCCCc---hHHHHHHHHhCcEEEEEcCCceEEE
Confidence 99987543 35799999999999999999999999999999998 9999999999999999999999999
Q ss_pred echhhcc------CCCCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCC
Q 001024 380 MLEEFLE------RPPLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDG 453 (1185)
Q Consensus 380 pl~dF~~------~~~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~ 453 (1185)
|++|||. .+.|+++|||++|+||.+.. +..+.+||+.+| +++|||+||+|+.++++ ++
T Consensus 147 p~~dF~~g~~~~~~t~L~~~Eil~~I~iP~~~~----------~~~~~~~K~~~R-~~~d~a~v~~A~~~~~~-----~~ 210 (296)
T 3hrd_C 147 KLTDFFDGEGFKRRNALEADEIMTEVIIDRPDA----------HSASAFYKLAKR-KSLAISVIGGGMAVKVD-----DA 210 (296)
T ss_dssp EHHHHHHCCSSSSSSSCCTTCEEEEEEEECCCT----------TEEEEEEEECSS-SSSCCCSEEEEEEEEEE-----TT
T ss_pred EHHHHhcccccccccCCCCCcEEEEEEecCCCC----------CCceEEEEeccc-cccchhhheEEEEEEEc-----CC
Confidence 9999997 45799999999999998764 344556677777 78999999999999996 34
Q ss_pred ceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCCcCCCC-CcHHHHHHHHHHHHHHHHHHHHhh
Q 001024 454 IRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 532 (1185)
Q Consensus 454 ~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~sa~YR~~la~~l~~r~l~~~~~~ 532 (1185)
++|+++||+|||++++ |+|++++|++|.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|+|.++.++
T Consensus 211 g~i~~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~la~~l~~r~l~~~~~~ 289 (296)
T 3hrd_C 211 GVCTWASMRGGCIGRY-PLHFKQAEEMLVGAPLTMETMEATLPILHDTVYDMARARPSVLYKKESVQGVFKKLFVDILDQ 289 (296)
T ss_dssp TEEEEEEEEEETSSSS-CEECHHHHHHHTTSBCCHHHHHTTHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEEECCCcc-ccchHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999 99999999999999999999999999999999998885 899999999999999999999987
Q ss_pred h
Q 001024 533 K 533 (1185)
Q Consensus 533 ~ 533 (1185)
.
T Consensus 290 ~ 290 (296)
T 3hrd_C 290 L 290 (296)
T ss_dssp H
T ss_pred h
Confidence 6
No 15
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=100.00 E-value=1.3e-53 Score=479.81 Aligned_cols=273 Identities=23% Similarity=0.274 Sum_probs=247.8
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 300 (1185)
.|+|++|+|++||+++|++ +++++++||||+|++ +|.+ ..|+.+|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~f~y~~P~sl~ea~~ll~~-----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~ 79 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD-----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFR 79 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH-----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHH
T ss_pred CceEECCCCHHHHHHHHhh-----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHH
Confidence 5899999999999999984 578999999999998 5553 67899999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEe
Q 001024 301 AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLM 380 (1185)
Q Consensus 301 l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vp 380 (1185)
|+++... .+.+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+||
T Consensus 80 l~~~~~~---------~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p~---sD~~~~L~Al~A~v~l~~~~g~R~vp 147 (288)
T 1t3q_C 80 NKTDPTV---------AKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADAG---AEMPFLMATLGATMYIASSAGVRSVS 147 (288)
T ss_dssp HHHCHHH---------HHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT---CHHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred HhcCHHH---------HHHHHHHHHHHHHhCCHHHHcceechhhcccCCCc---HHHHHHHHHcCcEEEEEcCCceEEEE
Confidence 9986432 24689999999999999999999999999999998 99999999999999999999999999
Q ss_pred chhhccCC---CCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceee
Q 001024 381 LEEFLERP---PLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVN 457 (1185)
Q Consensus 381 l~dF~~~~---~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~ 457 (1185)
++|||.++ .|+++|||++|+||.+.. .. . ++|..+| .+ |||+||+|+.++++ +++|+
T Consensus 148 ~~dF~~g~~~t~L~~~Eil~~I~iP~~~~----------~~-~-y~K~~~R-~~-d~a~v~~a~~~~~~------~~~i~ 207 (288)
T 1t3q_C 148 ATDFMKGHYFTDLEAGEVLVRVEIPIPAL----------HW-E-FDEYARR-KG-DYALVMAAAGLSMQ------GGRCV 207 (288)
T ss_dssp HHHHEEETTEESCCTTCEEEEEEEECCSS----------EE-E-EEEECSS-TT-SCCSEEEEEEEEEE------TTEEE
T ss_pred HHHHhcCcccccCCCCCEEEEEEecCCCC----------CC-c-EEEeCCC-cc-chhheEEEEEEEEc------CCeEE
Confidence 99999854 899999999999998764 22 2 3455444 54 99999999999996 46899
Q ss_pred eeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCCcCCCC-CcHHHHHHHHHHHHHHHHHHHHhhh
Q 001024 458 NCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 533 (1185)
Q Consensus 458 ~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~sa~YR~~la~~l~~r~l~~~~~~~ 533 (1185)
++||+|||++++ |+|++++|++|.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 208 ~~ria~Ggv~~~-p~r~~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~~ 283 (288)
T 1t3q_C 208 AARIALGAVEER-AHQAIRANDFLVGKVIDESTAATAAELATEGLEPRSDIHGSRDLRLSLAKAITQRVILKAAQGA 283 (288)
T ss_dssp EEEEEEESSSSS-CEECHHHHHHHTTCCCCHHHHHHHHHHHHTTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCe-eEEcHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 99999999999999999999999999999999999886 8999999999999999999998764
No 16
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=100.00 E-value=2.5e-52 Score=470.11 Aligned_cols=276 Identities=18% Similarity=0.230 Sum_probs=249.1
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 300 (1185)
.|+|++|+|++||+++|+++ ++++++++|||+|++ +|.+ ..|+++|||++|+||+.|+.++++|+|||+||+++
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL----GEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred ceEEECcCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 58999999999999999854 378999999999999 5764 67899999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEe
Q 001024 301 AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLM 380 (1185)
Q Consensus 301 l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vp 380 (1185)
|+++... .+.+|.|.+++++|||+||||+||||||||+++|. ||++|+|+||||+|+|.+.+|+|+||
T Consensus 81 l~~~~~~---------~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p~---sD~~~~L~Al~A~v~l~~~~G~r~v~ 148 (288)
T 1n62_C 81 LIGSDFL---------AAKLPIIRETSLLIADPQIRYMGTIGGNAANGDPG---NDMPALMQCLGAAYELTGPEGARIVA 148 (288)
T ss_dssp HHHCHHH---------HHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTT---CSHHHHHHHHTCEEEEEETTEEEEEE
T ss_pred HhcChHH---------HHHHHHHHHHHHHhCCHHHHccccccchhccCCCc---hHHHHHHHHhCcEEEEEeCCccEEEE
Confidence 9975332 24589999999999999999999999999999998 99999999999999999999999999
Q ss_pred chhhccCC---CCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceee
Q 001024 381 LEEFLERP---PLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVN 457 (1185)
Q Consensus 381 l~dF~~~~---~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~ 457 (1185)
++|||.++ .|+++|||++|+||.+.. +..+ .|++.+|| ..|||+||+|+.++++ +++|+
T Consensus 149 ~~df~~g~~~t~l~~~eil~~i~ip~~~~----------~~~~-~y~k~~rr-~~d~a~v~~a~~~~~~------~~~i~ 210 (288)
T 1n62_C 149 ARDYYQGAYFTAIEPGELLTAIRIPVPPT----------GHGY-AYEKLKRK-IGDYATAAAAVVLTMS------GGKCV 210 (288)
T ss_dssp HHHHEEETTEESCCTTCEEEEEEEECCCT----------TCEE-EEEEECSS-TTCCCSEEEEEEEEEE------TTEEE
T ss_pred HHHHhcCcccccCCCCCEEEEEEeCCCCC----------CCce-EEEEeCCC-ccCHhheeEEEEEEEc------CCeEE
Confidence 99999854 799999999999998764 2233 45555563 5699999999999996 46899
Q ss_pred eeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCCcCCCC-CcHHHHHHHHHHHHHHHHHHHHhhh
Q 001024 458 NCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEMK 533 (1185)
Q Consensus 458 ~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~sa~YR~~la~~l~~r~l~~~~~~~ 533 (1185)
++||+|||++++ |+|+.++|++|.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++.
T Consensus 211 ~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~~ 286 (288)
T 1n62_C 211 TASIGLTNVANT-PLWAEEAGKVLVGTALDKPALDKAVALAEAITAPASDGRGPAEYRTKMAGVMLRRAVERAKARA 286 (288)
T ss_dssp EEEEEEESSSSS-CEECHHHHHHHTTSCCCHHHHHHHHHHHHHHCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECCcCc-eEECHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999999886 8999999999999999999988754
No 17
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=100.00 E-value=2.4e-52 Score=473.88 Aligned_cols=270 Identities=19% Similarity=0.198 Sum_probs=244.5
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCC-eEEecccccHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQT-GIEIGATVTIS 299 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~-~l~IGA~vTl~ 299 (1185)
.|+|++|+||+||+++|+ + +++++|||||+|++ +|.+ ..|+.+|||++|+||+.|+.+++ +|+|||+||++
T Consensus 6 ~f~y~~P~sl~ea~~ll~-----~-~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~ 79 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA-----A-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLE 79 (324)
T ss_dssp CCEEECCSSHHHHHHHTT-----S-TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHH
T ss_pred ceEEEccCCHHHHHHHHh-----C-CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHH
Confidence 589999999999999998 3 78999999999998 6764 68999999999999999999765 99999999999
Q ss_pred HHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcc----------------------------------
Q 001024 300 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNL---------------------------------- 345 (1185)
Q Consensus 300 ~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI---------------------------------- 345 (1185)
+|++++.. .+.+|.|++++++|||+||||+|||||||
T Consensus 80 ~l~~~~~~---------~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~~~rC~y~~~~~~~k~~g~~c~a~~g~~~~~a~ 150 (324)
T 1rm6_B 80 AIAEHDAI---------RTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIV 150 (324)
T ss_dssp HHHHCHHH---------HHHSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSST
T ss_pred HHHhChHH---------HHHHHHHHHHHHHhCCHHHcceeEeeeecccccccccccccccccccCccccccccccceeec
Confidence 99987543 35699999999999999999999999999
Q ss_pred ----cccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEechhhccC-----CCCCCCceEEEEEecCCCccCCccccCCc
Q 001024 346 ----VMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLMLEEFLER-----PPLDSRSILLSVEIPCWDLTRNVTSETNS 416 (1185)
Q Consensus 346 ----~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vpl~dF~~~-----~~l~~~EiI~~I~iP~~~~~~~~~~~~~~ 416 (1185)
|+++|. ||++|+|+||||+|+|.+.+|+|+||++|||.+ +.|+++|||++|+||.+ .
T Consensus 151 ~g~~c~a~p~---sD~~~~L~AldA~v~l~~~~g~R~vp~~dF~~~~~~~~t~L~~~Eil~~I~iP~~-~---------- 216 (324)
T 1rm6_B 151 KSDRCYATYH---GDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT-G---------- 216 (324)
T ss_dssp TCSSCCCBCC---CSHHHHHHHTTCEEEEEETTEEEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC-T----------
T ss_pred ccccccCCCc---chhHHHHHHcCCEEEEEeCCCcEEEEHHHHhcCCccccccCCCCCEEEEEEecCC-C----------
Confidence 588887 999999999999999999999999999999964 37999999999999963 2
Q ss_pred ceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceeeeeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHH
Q 001024 417 VLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVNNCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIK 496 (1185)
Q Consensus 417 ~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~ 496 (1185)
...+.++|+.+| +++|||+||+|+.++++ +++|+++||+|||++++ |+|+ ++|++| |++|+++++++|++
T Consensus 217 ~~~~~y~K~~~R-~~~d~a~v~~A~~~~~~------~~~i~~~ria~Ggva~~-p~ra-~~E~~L-G~~~~~~~~~~a~~ 286 (324)
T 1rm6_B 217 AWSAAYSKVRIR-DAVDFPLAGVAAALQRD------GDRIAGLRVAITGSNSA-PLMV-PVDALL-GGNWDDAAAETLAQ 286 (324)
T ss_dssp TCEEEEEEECSS-SSSCCCSEEEEEEEEEE------TTEEEEEEEEEESSSSS-CEEC-CCGGGT-TSCCSHHHHHHHHH
T ss_pred CCceEEEEECcC-CccchhhEEEEEEEEEc------CCcEEEEEEEEEcCCCe-EEeh-HHHHHc-CCCCCHHHHHHHHH
Confidence 233445566667 78999999999999986 46899999999999999 9999 999999 99999999999999
Q ss_pred HHcccCCcCCCC-CcHHHHHHHHHHHHHHHHHHHHh
Q 001024 497 LLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTE 531 (1185)
Q Consensus 497 ~l~~e~~p~~~~-~sa~YR~~la~~l~~r~l~~~~~ 531 (1185)
.+.+++.|.+|. +|++||++|+.+|++|++.++..
T Consensus 287 ~~~~~~~p~~d~r~s~~YR~~la~~l~~r~l~~~~~ 322 (324)
T 1rm6_B 287 LVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWE 322 (324)
T ss_dssp HHHHHCCCCTTSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999886 89999999999999999998864
No 18
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=100.00 E-value=1.1e-49 Score=448.25 Aligned_cols=275 Identities=20% Similarity=0.266 Sum_probs=247.6
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 300 (1185)
.|+|++|+|++|++++++++ ++++++++|||+|++ ++.+ ..+.++|||++|+||+.|+.++++|+|||++|+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~----~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~ 80 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL----GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVEND 80 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH----GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHH
T ss_pred cceEECCCCHHHHHHHHHhc----CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 58999999999999999854 368999999999999 5764 56899999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCeeEEEe
Q 001024 301 AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQKCEKLM 380 (1185)
Q Consensus 301 l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g~R~vp 380 (1185)
|+++... .+.+|.|.++++++||+||||+|||||||++++|. +|++++|+||||+|++.+.+|.|++|
T Consensus 81 l~~~~~~---------~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~---~D~~~~l~Al~A~v~~~~~~G~r~i~ 148 (287)
T 1ffv_C 81 LISSPIV---------QARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG---NDHPALSIAVEAHFVLEGPNGRRTVP 148 (287)
T ss_dssp HHHCHHH---------HHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT---CSHHHHHHHTTCEEEEEETTEEEEEE
T ss_pred HhhChHH---------HHHhHHHHHHHHHhCCHHHhcceechhhhccCCCc---HHHHHHHHHcCcEEEEEcCCceEEEE
Confidence 9975221 24589999999999999999999999999999998 99999999999999999999999999
Q ss_pred chhhccCC---CCCCCceEEEEEecCCCccCCccccCCcceeeeeEeccCCCCCCcccceeeeEEEEEcCCcCCCCceee
Q 001024 381 LEEFLERP---PLDSRSILLSVEIPCWDLTRNVTSETNSVLLFETYRAAPRPLGNALPHLNAAFLAEVSPCKTGDGIRVN 457 (1185)
Q Consensus 381 l~dF~~~~---~l~~~EiI~~I~iP~~~~~~~~~~~~~~~~~~~~~k~~~Rr~~~d~a~v~~A~~~~~~~~~~~~~~~i~ 457 (1185)
++|||.++ .|+++|||++|.||.+.. +..+ .|++.+|| ..|||+||+|+.++++ +++|+
T Consensus 149 ~~df~~g~~~t~l~~~eii~~i~ip~~~~----------~~~~-~~~k~~rr-~~d~a~v~~a~~~~~~------~~~i~ 210 (287)
T 1ffv_C 149 ADGFFLGTYMTLLEENEVMVEIRVPAFAQ----------GTGW-AYEKLKRK-TGDWATAGCAVVMRKS------GNTVS 210 (287)
T ss_dssp STTTEEETTEESCCTTCEEEEEEEECCCT----------TCEE-EEEEECSS-TTSCCSEEEEEEEEEE------TTEEE
T ss_pred HHHHhcCcccccCCCCCEEEEEEecCCCC----------CCce-EEEEECCc-ccchhheEEEEEEEEc------CCeEE
Confidence 99999754 799999999999998764 2233 44445563 5699999999999996 46999
Q ss_pred eeEEEEcccCCCCcccHHHHHHHHcCCCCCHHHHHHHHHHHcccCCcCCCC-CcHHHHHHHHHHHHHHHHHHHHhh
Q 001024 458 NCRLAFGAFGTKHAIRARRVEEFLTGKVLNFGVLYEAIKLLRDSVVPEDGT-SIPAYRSSLAVGFLYEFFGSLTEM 532 (1185)
Q Consensus 458 ~~ria~Ggv~~~~p~ra~~~E~~L~Gk~~~~~~l~~a~~~l~~e~~p~~~~-~sa~YR~~la~~l~~r~l~~~~~~ 532 (1185)
++||+|||++++ |+|++++|++|.|++|+++++++|++.+.+++.|.+|. +|++||++|+.+|++|++.++.++
T Consensus 211 ~~ria~Ggv~~~-p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~r~s~~YR~~l~~~l~~r~l~~~~~~ 285 (287)
T 1ffv_C 211 HIRIALTNVAPT-ALRAEAAEAALLGKAFTKEAVQAAADAAIAICEPAEDLRGDADYKTAMAGQMVKRALNAAWAR 285 (287)
T ss_dssp EEEEEEESSSSS-CEECHHHHHTTBTSBCCHHHHHHHHHHHHHTCCCCCBTTBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcccCC-cccCHHHHHHhcCCCCCHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999 99999999999999999999999999999999999886 899999999999999999998765
No 19
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=100.00 E-value=1.4e-50 Score=409.49 Aligned_cols=146 Identities=43% Similarity=0.869 Sum_probs=135.4
Q ss_pred CccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecC
Q 001024 2 EKSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEG 81 (1185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg 81 (1185)
+.+++.+|||+||..+. ++|||.||++|.||||||+|+++|+.++++.+++||||++|+.+++|++|+||||
T Consensus 18 ~~~p~~~Ll~~LR~~lg--------ltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G~~I~TiEG 89 (164)
T 3nvw_A 18 NADPETTLLAYLRRKLG--------LRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEG 89 (164)
T ss_dssp TCCTTCBHHHHHHHTSC--------CTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTCEEECGGG
T ss_pred cCCCCCCHHHHHHHHcC--------CCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCCcceEEecc
Confidence 45678899999998777 7889999999999999999999988888888999999999999999999999999
Q ss_pred CCCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHH
Q 001024 82 LGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIAD 161 (1185)
Q Consensus 82 ~~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~ 161 (1185)
|++..+.|||||+||+++|++|||||||||||++++||++ +|.|+ ++||+++|+|||||||||++|++
T Consensus 90 L~~~~~~lhpvQ~af~~~~~~QCGfCtPG~imsa~aLl~~-----~p~pt-------~~eI~~al~GNlCRCTgY~~I~~ 157 (164)
T 3nvw_A 90 IGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRN-----QPEPT-------VEEIEDAFQGNLCRCTGYRPILQ 157 (164)
T ss_dssp TCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHH-----CSSCC-------HHHHHTSCTTCCCSSSCSHHHHH
T ss_pred cCCCCCccCHHHHHHHHcCCCcCccchhhHHHHHHHHHHh-----CCCCC-------HHHHHHHHcCCCCCCCCCHHHHH
Confidence 9864567999999999999999999999999999999965 56664 99999999999999999999999
Q ss_pred HHHHhh
Q 001024 162 ACKSFA 167 (1185)
Q Consensus 162 a~~~~~ 167 (1185)
|+++|+
T Consensus 158 Av~~~~ 163 (164)
T 3nvw_A 158 GFRTFA 163 (164)
T ss_dssp HHHTTC
T ss_pred HHHHHh
Confidence 999886
No 20
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=6.5e-46 Score=376.11 Aligned_cols=136 Identities=32% Similarity=0.529 Sum_probs=124.5
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCC
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGL 82 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~ 82 (1185)
..++.++|++||..+. ++|+|.||++|.||||||+| |+++|+||++|+.+++|++|+|||||
T Consensus 19 v~p~~tLLd~LR~~lg--------ltgtk~gC~~G~CGACtV~v----------dG~~v~sC~~~~~~~~G~~I~TiEgl 80 (160)
T 3hrd_D 19 TEPNKRLLDLLREDFG--------LTSVKEGCSEGECGACTVIF----------NGDPVTTCCMLAGQADESTIITLEGV 80 (160)
T ss_dssp ECSSSBHHHHHHTTSC--------CTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTTEEEECGGGT
T ss_pred cCCCCCHHHHHHHhcC--------CCccccccCCCCCCCCEEEE----------CCEEEEchhhhhhhhCCCceEEeCCC
Confidence 4567889999986544 56799999999999999999 89999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHHH
Q 001024 83 GNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 162 (1185)
Q Consensus 83 ~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 162 (1185)
++ .+.|||||+||+++|++|||||||||||++++||+ ++|.|+ ++||+++|+|||||||||++|++|
T Consensus 81 ~~-~~~l~pvq~af~~~~~~QCGfCtpG~ims~~all~-----~~~~pt-------~~eI~~al~GNlCRCtgY~~I~~A 147 (160)
T 3hrd_D 81 AE-DGKPSLLQQCFLEAGAVQCGYCTPGMILTAKALLD-----KNPDPT-------DEEITVAMSGNLCRCTGYIKIHAA 147 (160)
T ss_dssp SB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHT-----TCSSCC-------HHHHHHHHTTCCCSSSCSHHHHHH
T ss_pred CC-CCccCHHHHHHHHcCCCcCCcchhhHHHHHHHHHH-----hCCCCC-------HHHHHHHHcCCCCCCCCcHHHHHH
Confidence 86 56799999999999999999999999999999994 467774 999999999999999999999999
Q ss_pred HHHhhhc
Q 001024 163 CKSFAAD 169 (1185)
Q Consensus 163 ~~~~~~~ 169 (1185)
++.+++.
T Consensus 148 v~~aa~~ 154 (160)
T 3hrd_D 148 VRYAVER 154 (160)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998854
No 21
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=100.00 E-value=2.3e-43 Score=359.82 Aligned_cols=136 Identities=37% Similarity=0.661 Sum_probs=124.9
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCC
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGL 82 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~ 82 (1185)
..++.++|++||..+. ++|+|.||++|.||||||+| ||++|+||++|+.+++|++|+|||||
T Consensus 19 v~~~~tLLd~LR~~lg--------ltg~k~gC~~G~CGaCtV~v----------dG~~v~sC~~~~~~~~G~~I~TiEgL 80 (163)
T 1ffv_A 19 VEPRTLLIHFLREELN--------LTGAHIGCETSHCGACTVDI----------DGRSVKSCTHLAVQCDGSEVLTVEGL 80 (163)
T ss_dssp ECTTCBHHHHHHHTSC--------CTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTTCEEECGGGT
T ss_pred cCCCCcHHHHHHhcCC--------CcccccCCCCCCCCCCEEEE----------CCcEecchHhhHHHhCCceEEEECCC
Confidence 3567899999998654 67799999999999999999 89999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHHH
Q 001024 83 GNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 162 (1185)
Q Consensus 83 ~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 162 (1185)
++ .+.+||||++|+++|++|||||||||||++++||++ +|.| |++||+++|+|||||||||++|++|
T Consensus 81 ~~-~~~l~pvq~a~~~~~~~QCG~CtpG~imsa~all~~-----~~~p-------t~~ei~~~l~gnlCRCtgY~~I~~A 147 (163)
T 1ffv_A 81 AN-KGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQE-----NPNP-------TEAEIRMGMTGNLCRCTGYQNIVKA 147 (163)
T ss_dssp SB-TTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSSSCSHHHHHH
T ss_pred CC-CCCcCHHHHHHHHhCCccCccccHhHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCCCCCHHHHHH
Confidence 86 678999999999999999999999999999999965 4666 4999999999999999999999999
Q ss_pred HHHhhhc
Q 001024 163 CKSFAAD 169 (1185)
Q Consensus 163 ~~~~~~~ 169 (1185)
++.+++.
T Consensus 148 v~~~a~~ 154 (163)
T 1ffv_A 148 VQYAARK 154 (163)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 22
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=100.00 E-value=3.8e-43 Score=359.30 Aligned_cols=137 Identities=35% Similarity=0.633 Sum_probs=124.9
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCC
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGL 82 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~ 82 (1185)
..+..++|++||..+. ++|+|.||++|.||||||+| ||++|+||++|+.+++|++|+|||||
T Consensus 19 v~~~~tLLd~LR~~lg--------l~g~k~gC~~G~CGaCtV~v----------dG~~v~SC~~~~~~~~G~~V~TiEgL 80 (166)
T 1n62_A 19 VEPRTLLIHFIREQQN--------LTGAHIGCDTSHCGACTVDL----------DGMSVKSCTMFAVQANGASITTIEGM 80 (166)
T ss_dssp ECTTCBHHHHHHHTSC--------CTTSCCCCSSSCSCTTEEEE----------TTEEEEGGGSBGGGGTTCEEECGGGS
T ss_pred cCCCCcHHHHHHHcCC--------CCccccCCCCCCCCCCEEEE----------CCcEEechhhhHHHhCCceEEEeCCC
Confidence 3567899999998654 67799999999999999999 89999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHHH
Q 001024 83 GNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 162 (1185)
Q Consensus 83 ~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 162 (1185)
++.++.+||||++|+++|++|||||||||||++++||++ +|.| |++||+++|+|||||||||++|++|
T Consensus 81 ~~~~~~~~pvq~a~~~~~~~QCG~CtpG~imsa~all~~-----~~~p-------t~~eI~~~l~gNlCRCtgY~~I~~A 148 (166)
T 1n62_A 81 AAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQE-----NPSP-------TEAEIRFGIGGNLCRCTGYQNIVKA 148 (166)
T ss_dssp SCTTSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSSSTTHHHHHH
T ss_pred CCcCCccCHHHHHHHHcCCccCCccchhHHHHHHHHHHc-----CCCC-------CHHHHHHHHcCCccCCCCCHHHHHH
Confidence 853468999999999999999999999999999999965 4666 4999999999999999999999999
Q ss_pred HHHhhhc
Q 001024 163 CKSFAAD 169 (1185)
Q Consensus 163 ~~~~~~~ 169 (1185)
++.+++.
T Consensus 149 v~~~a~~ 155 (166)
T 1n62_A 149 IQYAAAK 155 (166)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 23
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=100.00 E-value=1e-38 Score=326.71 Aligned_cols=136 Identities=35% Similarity=0.568 Sum_probs=124.5
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCC
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGL 82 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~ 82 (1185)
..+..++|++||..+. ++|+|.||++|.||||||+| |+++|+||++|+.+++|++|+|||||
T Consensus 18 ~~~~~tLL~~Lr~~~g--------l~g~k~gC~~G~CGaCtV~v----------dG~~v~sC~~~~~~~~G~~v~TiEgL 79 (161)
T 1rm6_C 18 VPDNMLLLDYLRETVG--------LTGTKQGCDGGECGACTVLV----------DDRPRLACSTLAHQVAGKKVETVESL 79 (161)
T ss_dssp EETTCBHHHHHHHTTC--------CTTSCCCSSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTTSEEECGGGS
T ss_pred cCCcCcHHHHHHHcCC--------CcccccCCCCCCCCCCEEEE----------CCcEEechHHHHHHhCCceEEEECCC
Confidence 3567899999998764 56799999999999999999 89999999999999999999999999
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHHH
Q 001024 83 GNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADA 162 (1185)
Q Consensus 83 ~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a 162 (1185)
++ .+.+||+|++|+++|+.|||||||||||++|+||.+ +|+| |+++|+++|+|||||||||++|++|
T Consensus 80 ~~-~~~~~p~q~a~~~~~~~qCG~Ctpg~im~a~~ll~~-----~~~p-------t~~~i~~~l~gnlcRCtgy~~i~~A 146 (161)
T 1rm6_C 80 AT-QGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRK-----NPSP-------SRDEIKAALAGNLCRCTGYVKIIKS 146 (161)
T ss_dssp SB-TTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHTTTCCCSSSCSHHHHHH
T ss_pred CC-CCccCHHHHHHHHhCCCcCCCCchHHHHHHHHHHhc-----CCCC-------CHHHHHHHHcCCeECCCCCHHHHHH
Confidence 86 578999999999999999999999999999999965 3556 4999999999999999999999999
Q ss_pred HHHhhhc
Q 001024 163 CKSFAAD 169 (1185)
Q Consensus 163 ~~~~~~~ 169 (1185)
++.+++.
T Consensus 147 ~~~~~~~ 153 (161)
T 1rm6_C 147 VETAAAA 153 (161)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 24
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=100.00 E-value=1.2e-34 Score=299.69 Aligned_cols=135 Identities=36% Similarity=0.678 Sum_probs=121.7
Q ss_pred cccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCCC
Q 001024 4 SLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLG 83 (1185)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~~ 83 (1185)
.+..++|++||..+. ++|+|.||++|.||+|+|+| +|++|+||++|+..++|++|+|+|||+
T Consensus 26 ~~~~tlL~~Lr~~~g--------l~g~~~~C~~G~CGaC~V~v----------dG~~v~sC~~~~~~~~G~~v~Tiegl~ 87 (168)
T 1t3q_A 26 EPRMHLADALREVVG--------LTGTKIGCEQGVCGSCTILI----------DGAPMRSCLTLAVQAEGCSIETVEGLS 87 (168)
T ss_dssp CTTSBHHHHHHHTTC--------CTTSCCSCSSSSSCTTEEEE----------TTEEEEGGGSBGGGGTTCEEECGGGTC
T ss_pred CCCCcHHHHHHhcCC--------CCccccCCCCCCCCCcEEEE----------CCCEeechhhHHHHhCCCeEEEEcCCC
Confidence 467789999987543 45799999999999999999 889999999999999999999999998
Q ss_pred CCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhcCccccCCCChhHHHHH
Q 001024 84 NSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIAGNLCRCTGYRPIADAC 163 (1185)
Q Consensus 84 ~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~ 163 (1185)
+ ...+||+|++|+++|+.|||||+|||+|++|+||.+ ++.| ++++|+++|+||+||||||++|++|+
T Consensus 88 ~-~~~~~~~q~a~~~~~~~qCG~C~pg~i~~a~~ll~~-----~~~p-------~~~~i~~~l~gnlcRCt~y~~~v~A~ 154 (168)
T 1t3q_A 88 Q-GEKLNALQDSFRRHHALQCGFCTAGMLATARSILAE-----NPAP-------SRDEVREVMSGNLCRCTGYETIIDAI 154 (168)
T ss_dssp C-SSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHGGGSCCSSSCSHHHHHHH
T ss_pred C-ccccCHHHHHHHHhCCCcCCCchHHHHHHHHHHHhc-----CCCC-------CHHHHHHHHcCCcccCCCchHHHHHH
Confidence 6 567999999999999999999999999999999954 3445 48999999999999999999999999
Q ss_pred HHhhhc
Q 001024 164 KSFAAD 169 (1185)
Q Consensus 164 ~~~~~~ 169 (1185)
+.+++.
T Consensus 155 ~~~~~~ 160 (168)
T 1t3q_A 155 TDPAVA 160 (168)
T ss_dssp TCHHHH
T ss_pred HHHHHH
Confidence 887653
No 25
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.89 E-value=1.2e-22 Score=231.86 Aligned_cols=142 Identities=23% Similarity=0.218 Sum_probs=130.6
Q ss_pred ceeeeeeeceeecccc----cccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcC
Q 001024 1021 RKKGVCRLPIVHEVTL----RSTPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQA 1096 (1185)
Q Consensus 1021 ~~rGia~~~~~~~~~~----~~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~ 1096 (1185)
++||+|++++.++.++ .+..+.|+|++||+|+|.+|..|||||++|+++||+||+||+ |+|+|+|..+
T Consensus 2 k~rGiGia~~~~~~g~~~~~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi--------~~e~V~v~~~ 73 (330)
T 3hrd_B 2 KKRGKGVGSMWYGIGNTGLPNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGL--------DYEKIHVTWG 73 (330)
T ss_dssp EEEEEEEEEEEEECSSTTSCCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTC--------CGGGEEEEES
T ss_pred cEEEEEEEEEEEecCCCCCCCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCC--------CHHHEEEEec
Confidence 4688888888888773 247899999999999999999999999999999999999999 9999999999
Q ss_pred CCcccccCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------------CCCCCHHHHHHHHHhCC
Q 001024 1097 DTLSVIQGGFTAGSTTSEASCQVVRDCCNILVERLTLLRERLQGQ------------------MGNVEWETLIQQVHICS 1158 (1185)
Q Consensus 1097 dT~~~p~~~~t~gS~~t~~~g~Av~~Ac~~L~~rL~~~aa~~~~~------------------~~~~~~~~~v~~a~~~~ 1158 (1185)
||+.+|++++|+|||++.+.|.|+++||++||+||+++|+++|+. ...++|.|++..+|..+
T Consensus 74 DT~~~p~~~~T~gSrst~~~g~Av~~Aa~~lr~~L~~~AA~~~~~~~~~l~~~~G~v~~~~~~~~~~s~~ela~~a~~~~ 153 (330)
T 3hrd_B 74 DTMVTPDGGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERSMTYGELMAAMKAAG 153 (330)
T ss_dssp BTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSSCCCSSSBCCCCSSCSCSCCBHHHHHHHHHHTT
T ss_pred CCCCCCCCCCCcchHhHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEECCCCCCcccHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999988752 23589999999999999
Q ss_pred CCeEEEEEecCC
Q 001024 1159 SEALSTEFILFN 1170 (1185)
Q Consensus 1159 v~l~a~~~~~~~ 1170 (1185)
+.|+++++|..+
T Consensus 154 ~~l~~~g~~~~~ 165 (330)
T 3hrd_B 154 RMAVGAGSYNPN 165 (330)
T ss_dssp CCEEEEEEECCC
T ss_pred CceeEEEEecCC
Confidence 999999999765
No 26
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.52 E-value=4.7e-08 Score=108.52 Aligned_cols=64 Identities=16% Similarity=0.148 Sum_probs=57.0
Q ss_pred cccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCCCC
Q 001024 6 RSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGN 84 (1185)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~~~ 84 (1185)
..++|++|+.+....+.|++ +|.||++|.||+|+|.| ||+++.||++++....| .++|||+|.+
T Consensus 65 ~~tlLdaL~~i~~~~~ptl~----~~~~C~~G~CGsC~V~I----------nG~~~laC~t~v~~~~~-~~~tIepL~~ 128 (282)
T 3vr8_B 65 GTMVLDALIKIKNEVDPTLT----FRRSCREGICGSCAMNI----------AGENTLACICNIDQNTS-KTTKIYPLPH 128 (282)
T ss_pred CCcHHHHHHhcCcccCCcee----ecCCCCCCCCCCCEEEE----------CCEEecchhhhHhHhcC-CcEEeccCCC
Confidence 57899999998877777776 89999999999999999 89999999999988666 7899999975
No 27
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.24 E-value=6.6e-07 Score=97.63 Aligned_cols=62 Identities=15% Similarity=0.078 Sum_probs=54.9
Q ss_pred cccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHh--cCCCEEEEecCCC
Q 001024 6 RSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCS--VNGCLITTSEGLG 83 (1185)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~--~~g~~i~TvEg~~ 83 (1185)
..++|++|+..... +.+++ ++.||++|.||+|+|.| +|+++.||.+++.. +.|.+ +|||+|.
T Consensus 32 ~~tll~~l~~~~~~-~~~l~----~~~~C~~g~Cg~C~v~v----------~G~~~laC~~~~~~~g~~~~~-~~ie~l~ 95 (238)
T 2wdq_B 32 DMMLLDALIQLKEK-DPSLS----FRRSCREGVCGSDGLNM----------NGKNGLACITPISALNQPGKK-IVIRPLP 95 (238)
T ss_dssp CCBHHHHHHHHHHH-CTTCC----CCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGTCCTTSC-EEEECCT
T ss_pred CChHHHHHHHhccc-CCCcc----ccccCCCCCCCCCEEEE----------CCEEEcccccchhhhccCCCC-EEEeeCC
Confidence 78899999998855 55565 89999999999999999 89999999999999 77777 8899996
No 28
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.19 E-value=1.1e-06 Score=96.20 Aligned_cols=68 Identities=19% Similarity=0.242 Sum_probs=59.6
Q ss_pred CccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecC
Q 001024 2 EKSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEG 81 (1185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg 81 (1185)
+..+..++|++|+.+-...+.|++ .+.+|++|.||+|+|.| +|+++.||.+++..++| .++|||+
T Consensus 29 ~~~~~~tlL~~l~~~~~~~~~~l~----~~~~c~~g~Cg~C~v~i----------~G~~~~aC~~~~~~~~g-~~~~ie~ 93 (241)
T 2bs2_B 29 EEAPSMTIFIVLNMIRETYDPDLN----FDFVCRAGICGSCGMMI----------NGRPSLACRTLTKDFED-GVITLLP 93 (241)
T ss_dssp ECCTTCBHHHHHHHHHHHTCTTCC----CCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGCTT-SEEEEEC
T ss_pred eCCCCChHHHHHHHhchhcCCCCc----cCCCCCCCCCCCCEeEE----------CCCeecchhCcHhHcCC-CeEEEec
Confidence 345567899999998877777776 89999999999999999 89999999999999988 7899999
Q ss_pred CCC
Q 001024 82 LGN 84 (1185)
Q Consensus 82 ~~~ 84 (1185)
|.+
T Consensus 94 l~~ 96 (241)
T 2bs2_B 94 LPA 96 (241)
T ss_dssp CTT
T ss_pred CCC
Confidence 964
No 29
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.16 E-value=9.9e-07 Score=97.11 Aligned_cols=64 Identities=16% Similarity=0.094 Sum_probs=56.1
Q ss_pred cccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCCCC
Q 001024 6 RSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGLGN 84 (1185)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~~~ 84 (1185)
..++|++|+.+....+-|++ .+.+|++|.||+|+|.| +|+++.||.+++..++|. ++|||+|.+
T Consensus 41 ~~tlLd~l~~~~~~~~p~l~----~~~~c~~g~Cg~C~v~i----------~G~~~~aC~~~~~~~~g~-~~~iepl~~ 104 (252)
T 2h88_B 41 GPMVLDALIKIKNELDSTLT----FRRSCREGICGSCAMNI----------AGGNTLACTKKIDPDLSK-TTKIYPLPH 104 (252)
T ss_dssp CSBHHHHHHHHHHHTCTTCC----CCCSCSSSSSCTTEEEE----------TTEEEEGGGSBCCCCTTS-CEEEECSTT
T ss_pred CChHHHHHHHhCcccCCCcc----ccCCCCCCCCCCCEEEE----------CCcEEccccCCHhHcCCC-ceEEecccC
Confidence 67899999998765555676 78899999999999999 899999999999999887 889999964
No 30
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=97.71 E-value=2.2e-05 Score=85.80 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=54.2
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhcCCCEEEEecCC
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSVNGCLITTSEGL 82 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~TvEg~ 82 (1185)
..+..++|++|+..-..-+.|+. .+.+|++|.||+|+|.| +|+++.||.+++....| ++|||++
T Consensus 30 ~~~~~tll~al~~~~~~~~p~l~----~~~~c~~G~Cg~C~v~v----------~G~~~~aC~~~~~~~~~--~~~i~~l 93 (243)
T 1kf6_B 30 YDATTSLLDALGYIKDNLAPDLS----YRWSCRMAICGSCGMMV----------NNVPKLACKTFLRDYTD--GMKVEAL 93 (243)
T ss_dssp ECTTCBHHHHHHHHHHHTCTTCC----CCCCCSSSSSCCCEEEE----------TTEEEEGGGCBGGGCTT--CEEEECC
T ss_pred cCCCChHHHHHHHcCcccCCCcc----cccCCCCCcCCCCEeEE----------CCEEEeeeeeEHhhCCC--cEEEEec
Confidence 34567899999987544345565 89999999999999999 88999999999988765 5889998
Q ss_pred CC
Q 001024 83 GN 84 (1185)
Q Consensus 83 ~~ 84 (1185)
..
T Consensus 94 ~~ 95 (243)
T 1kf6_B 94 AN 95 (243)
T ss_dssp TT
T ss_pred CC
Confidence 63
No 31
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.64 E-value=1.3e-05 Score=98.26 Aligned_cols=100 Identities=18% Similarity=0.299 Sum_probs=75.4
Q ss_pred ccccccHHHHHHHHhhcccccccccccccccc-c-CCCCCccEEEEcccCCCcCCCCCe-eccchHhhhHhcCCCEEEEe
Q 001024 3 KSLRSQALTLLRLCLSSCVITLALRVSSSVVV-K-ASGCGACVVLLSKYNPELDQLEDF-TISSCLTLLCSVNGCLITTS 79 (1185)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC-~-~G~CGaCtV~~~~~~~~~~~~~~~-~v~sCl~~~~~~~g~~i~Tv 79 (1185)
.....++|+.|+.. ++..--+-. ..+| + .|.||+|+|.+ ++. .+.||.+++. +|+.|.|.
T Consensus 13 v~~g~tiL~a~~~~----gi~ip~lC~-~~~~~~~~G~Cg~C~V~v----------~g~~~~~aC~t~v~--~gm~V~T~ 75 (574)
T 3c8y_A 13 TDEDTTILKFARDN----NIDISALCF-LNNCNNDINKCEICTVEV----------EGTGLVTACDTLIE--DGMIINTN 75 (574)
T ss_dssp ECCCCBHHHHHHHT----TCCCCCSSC-BTTBCCSSSCCCTTEEEE----------TTTEEEEGGGCBCC--TTCEEESS
T ss_pred eCCCCHHHHHHHHc----CCCCCcccC-CCCCCCCcccCCCCEEEe----------CCCcccccCCCCcc--cceeEEec
Confidence 34567788888764 443211112 2355 5 89999999999 555 8999999986 89999999
Q ss_pred cCCCCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHh
Q 001024 80 EGLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVD 121 (1185)
Q Consensus 80 Eg~~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~ 121 (1185)
++... ..-+.+++.|...|..+|++|.++..+.+..+...
T Consensus 76 ~~~~~--~~r~~~lelll~~h~~~C~~C~~~~~C~Lq~~a~~ 115 (574)
T 3c8y_A 76 SDAVN--EKIKSRISQLLDIHEFKCGPCNRRENCEFLKLVIK 115 (574)
T ss_dssp CHHHH--HHHHHHHHHHHTTSCCCCTTCTTTTSCHHHHHHHH
T ss_pred chhhh--hhHHHHHHHHHhccCCCCCcCCCCcchHHHHHHHH
Confidence 98753 22367999999999999999999988887776543
No 32
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=97.62 E-value=4.8e-05 Score=87.06 Aligned_cols=158 Identities=13% Similarity=0.064 Sum_probs=103.6
Q ss_pred ccccC-CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcC-CeEEeccc
Q 001024 218 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQ-TGIEIGAT 295 (1185)
Q Consensus 218 ~~~~~-~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~-~~l~IGA~ 295 (1185)
+.+.+ ...+++|+|.+|+.++++.... .+-...+++|||.+.+-.. ....+|+++ +.++..|+.++ ..+++||+
T Consensus 9 ~~igg~a~~~v~p~s~eel~~~l~~a~~-~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~~~~v~vgAG 84 (340)
T 1uxy_A 9 FGIDHNAQHIVCAEDEQQLLNAWQYATA-EGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPDAWYLHVGAG 84 (340)
T ss_dssp TCCCCBEEEEEEESSHHHHHHHHHHHHH-TTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSSEEEEEEETT
T ss_pred CCCCccccEEEEeCCHHHHHHHHHHHHH-cCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCCCeEEEEecC
Confidence 33444 4568999999999998874311 2346789999999876332 356889985 66555554455 48999999
Q ss_pred ccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHH---HhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEe
Q 001024 296 VTISKAIEALKEETKEFHSEALMVFKKIAGHM---EKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMT 372 (1185)
Q Consensus 296 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~---~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s 372 (1185)
+++.+|.+..... .+..|.-+. ..+|+..++|.++-|++++..-. .|++..
T Consensus 85 ~~~~~l~~~~~~~----------Gl~Gle~~~gIPGtVGGa~~~NaGayG~ei~d~v~----------------~v~vv~ 138 (340)
T 1uxy_A 85 ENWHRLVKYTLQE----------GMPGLENLALIPGCVGSSPIQNIGAYGVELQRVCA----------------YVDSVE 138 (340)
T ss_dssp SBHHHHHHHHHHT----------TCCSCGGGTTCCSBGGGTTTTTCEETTEEGGGTEE----------------EEEEEE
T ss_pred CCHHHHHHHHHHC----------CCCccccccCCccchhHHHHhccccchhhHHhhee----------------EEEEEE
Confidence 9999999886543 111111111 36777777787777776654422 266777
Q ss_pred C-Ce-eEEEechhhccCC---CCC----CCceEEEEEecCCC
Q 001024 373 G-QK-CEKLMLEEFLERP---PLD----SRSILLSVEIPCWD 405 (1185)
Q Consensus 373 ~-~g-~R~vpl~dF~~~~---~l~----~~EiI~~I~iP~~~ 405 (1185)
. +| .++++-+|++-+. .+. ...||+++.+...+
T Consensus 139 ~~~G~v~~~~~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~ 180 (340)
T 1uxy_A 139 LATGKQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPK 180 (340)
T ss_dssp TTTTEEEEEETGGGTCBTTBCGGGTTTTTTEEEEEEEEEEES
T ss_pred CCCCcEEEEeHHHhccccCcCccCCcCCCCEEEEEEEEEEEc
Confidence 4 67 4888888865432 121 25789998886543
No 33
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=97.26 E-value=0.00042 Score=78.94 Aligned_cols=153 Identities=14% Similarity=0.143 Sum_probs=98.3
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 302 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 302 (1185)
...+++|+|.+|+.++++.... .+-...+++|||++..-.. .....+||+++ |+.|+.+++.+++||++++.+|.
T Consensus 49 p~~vv~P~s~eev~~~l~~a~~-~~~pv~~~GgGtnl~~~~~-~~~gvvI~l~~---m~~i~id~~~v~v~aGv~~~~l~ 123 (326)
T 1hsk_A 49 ADFYITPTKNEEVQAVVKYAYQ-NEIPVTYLGNGSNIIIREG-GIRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVS 123 (326)
T ss_dssp EEEEECCSSHHHHHHHHHHHHH-TTCCEEEESSCSSEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHH-cCCCEEEECCCCccccCCC-CCCeEEEEeCC---CCceEEcCCEEEEeCCCcHHHHH
Confidence 4568999999999998874211 2346888999999864221 12468899986 66776677899999999999999
Q ss_pred HHHHHhhhhhhhhhHhhHHHHHHHHHhh-hchhhhcccccCCccccc-ccCCCCCchHHHHHhcCcEEEEEeCCe-eEEE
Q 001024 303 EALKEETKEFHSEALMVFKKIAGHMEKI-ASRFIRNSASVGGNLVMA-QRKHFPSDVATVLLGAGAMVNIMTGQK-CEKL 379 (1185)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~L~~~~~~i-as~qIRN~aTiGGNI~~a-~p~~~~sD~~~~LlAldA~v~l~s~~g-~R~v 379 (1185)
+.+... .++.| ..+ +.| +||||++++. ...+ ..+.-.++ .+++...+| .+++
T Consensus 124 ~~l~~~----------Gl~gL----e~~~~~P-----gtvGG~i~~naggyG--~~~~d~v~----~v~vv~~~G~i~~~ 178 (326)
T 1hsk_A 124 RVARDY----------ALTGL----EFACGIP-----GSIGGAVYMNAGAYG--GEVKDCID----YALCVNEQGSLIKL 178 (326)
T ss_dssp HHHHHT----------TEESC----GGGTTCC-----SBHHHHHHHTCEETT--EEHHHHEE----EEEEECTTSCEEEE
T ss_pred HHHHHC----------CCccc----cccCCCc-----chhhHHHhcccccCc--hhhhhhEE----EEEEEeCCCCEEEE
Confidence 886543 11100 011 122 4888888653 3331 13332222 455666777 5777
Q ss_pred echhhccCCC---C-CCCceEEEEEecCCC
Q 001024 380 MLEEFLERPP---L-DSRSILLSVEIPCWD 405 (1185)
Q Consensus 380 pl~dF~~~~~---l-~~~EiI~~I~iP~~~ 405 (1185)
+-++++.+.. | ..+.||+++.+...+
T Consensus 179 ~~~~~~~gyr~~~l~s~ggIIt~~~l~l~p 208 (326)
T 1hsk_A 179 TTKELELDYRNSIIQKEHLVVLEAAFTLAP 208 (326)
T ss_dssp ETTTTTCBTTBCHHHHTTCEEEEEEEECEE
T ss_pred ChHHcCCCccccccCCCCEEEEEEEEEEEc
Confidence 8777654332 2 235899999997654
No 34
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=96.47 E-value=0.049 Score=61.89 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=46.1
Q ss_pred cCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------ccCCCCCCCCc
Q 001024 769 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAI 827 (1185)
Q Consensus 769 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~ 827 (1185)
..+.++.+..+.||.++|+++.+-. ..+.+.+|+.||+|.++|+|... ..+|.+|++..
T Consensus 21 ~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~~~~T~gSrst 90 (330)
T 3hrd_B 21 PNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPDGGATSASRQT 90 (330)
T ss_dssp CCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHH
T ss_pred CCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcchHhH
Confidence 4567788888889999999987654 35678889999999999999864 44666676653
No 35
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=95.94 E-value=0.012 Score=66.55 Aligned_cols=154 Identities=16% Similarity=0.230 Sum_probs=92.1
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 302 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 302 (1185)
...++.|+|.+|+.++++.... .+-...+++|||.+.+-.. .....+||+++ |+.|..+++.+++||++++.+|.
T Consensus 55 p~~vv~P~s~eev~~~v~~a~~-~~~pv~v~GgGsnl~~~~~-~~~gvvI~l~~---~~~I~~d~~~v~v~aG~~~~~l~ 129 (322)
T 3tx1_A 55 ADVFVMPKTIEEAQEVVAYCHQ-NKIPLTILGNGSNLIIKDG-GIRGVILHLDL---LQTIERNNTQIVAMSGAKLIDTA 129 (322)
T ss_dssp EEEEEECSSHHHHHHHHHHHHH-TTCCEEEESCCTTEEECTT-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHHH
T ss_pred eeEEEEeCCHHHHHHHHHHHHH-cCCcEEEECCccCCCcCCC-CCCeEEEECCC---CCcEEECCCEEEEecCcCHHHHH
Confidence 4578999999999887763211 2346788999999865221 23467899974 66777778899999999999999
Q ss_pred HHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCe-eEEEec
Q 001024 303 EALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK-CEKLML 381 (1185)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g-~R~vpl 381 (1185)
+.+...- +. -+...+.. -+||||++++.... |-..+.-.++ .+++...+| .++++-
T Consensus 130 ~~l~~~G----------l~----Gle~~~gi----PgTVGGav~~NaGg-yGg~~~d~v~----~vevV~~~G~i~~~~~ 186 (322)
T 3tx1_A 130 KFALNES----------LS----GLEFACGI----PGSIGGALHMNAGA-YGGEISDVLE----AATVLTQTGELKKLKR 186 (322)
T ss_dssp HHHHHTT----------EE----SCGGGTTC----CSBHHHHHHHTCEE-TTEEHHHHEE----EEEEECTTSCEEEEEG
T ss_pred HHHHHcC----------Cc----ccccCCCC----cchhHHHHHhCccC-cccchHhhEE----EEEEEcCCCCEEEech
Confidence 8866430 00 01111222 18999999754332 1122222222 234444556 455665
Q ss_pred hhh-cc--CCCCC-CCceEEEEEecCC
Q 001024 382 EEF-LE--RPPLD-SRSILLSVEIPCW 404 (1185)
Q Consensus 382 ~dF-~~--~~~l~-~~EiI~~I~iP~~ 404 (1185)
+|. |. .-.+. .+.||+++.+...
T Consensus 187 ~~~~~~yR~s~~g~~~~IIt~~tl~L~ 213 (322)
T 3tx1_A 187 SELKAAYRFSTIAEKNYIVLDATFSLA 213 (322)
T ss_dssp GGCC--CC-CTTTGGGCEEEEEEEECE
T ss_pred HHcCcchhhcccCCCCEEEEEEEEEEE
Confidence 653 32 11222 2458888777553
No 36
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=95.76 E-value=0.25 Score=62.69 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=46.5
Q ss_pred CCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCc
Q 001024 771 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAI 827 (1185)
Q Consensus 771 p~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~ 827 (1185)
..++.+..+.||.++|+++++.. +.+.+.+|+.||||.++|+|.. +.-+|.+|++.+
T Consensus 500 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t 567 (803)
T 1ffv_B 500 FDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRST 567 (803)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHH
Confidence 35678888889999999998766 5578899999999999999986 455677777754
No 37
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=95.37 E-value=0.0076 Score=71.04 Aligned_cols=102 Identities=11% Similarity=0.182 Sum_probs=71.5
Q ss_pred cEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHHH
Q 001024 224 GSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAIE 303 (1185)
Q Consensus 224 ~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~~ 303 (1185)
..+++|+|.+|+.++++. -...++++|||++...-.......+||++++.....|..+++.++++|++++.+|.+
T Consensus 22 ~~v~~P~s~~ev~~~v~~-----a~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~ 96 (422)
T 2vfr_A 22 KELLRPHSLDALRALVAD-----SARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELAR 96 (422)
T ss_dssp SSCBCCSSHHHHHHHHHH-----CSSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHHHHH
T ss_pred CEEEeCCCHHHHHHHHHh-----CCCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHHHHH
Confidence 357899999999999884 246888999998755221123578999987654434444567999999999999998
Q ss_pred HHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCccccc
Q 001024 304 ALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA 348 (1185)
Q Consensus 304 ~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a 348 (1185)
.+..+ . + .+..+.=-+.+||||+|++.
T Consensus 97 ~l~~~--------G--l--------~l~~~~~~~~~tvGG~i~~~ 123 (422)
T 2vfr_A 97 VVHAR--------G--L--------ALPNMASLPHISVAGSVATG 123 (422)
T ss_dssp HHHHT--------T--E--------ECSCCCSSSCSBHHHHHHHT
T ss_pred HHHHc--------C--C--------cccCCCCCCCeeHHHHHhcC
Confidence 87643 0 0 11122223568999999886
No 38
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=95.28 E-value=0.049 Score=65.20 Aligned_cols=156 Identities=12% Similarity=0.058 Sum_probs=95.3
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCC--CCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSN--QISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~--~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 300 (1185)
...+++|+|.+|+.++++.... . +-...+++||+++.-.. ......+||++++..+..+..+.+.+++||++++.+
T Consensus 43 p~~vv~P~s~eev~~~v~~a~~-~~~~~~v~~~G~G~s~~~~~-~~~~gvvIdl~~l~~i~~~d~~~~~v~v~aGv~l~~ 120 (481)
T 4feh_A 43 VANVLRTPDAEMIVKAVARVAE-SGGGRGAIARGLGRSYGDNA-QNGGGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQ 120 (481)
T ss_dssp EEEEEECSCHHHHHHHHHHHHT-TTCTTCEEEECSSCSSSSTT-CCTTSEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred CCEEEeCCCHHHHHHHHHHHHH-cCCCceEEEEeCCcCCCCCC-CCcCeEEEECccCCCceEEcCCCCEEEEcCCccHHH
Confidence 4568999999999988874321 1 24678899999873211 123568999988654433444556899999999999
Q ss_pred HHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccC------CCCCchHHHHHhcCcEEEEEeCC
Q 001024 301 AIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIMTGQ 374 (1185)
Q Consensus 301 l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~------~~~sD~~~~LlAldA~v~l~s~~ 374 (1185)
|.+.+... ...+|. . +.+ .-+||||+|++..-. +..+|.+ -.+++...+
T Consensus 121 L~~~l~~~--------Gl~l~~-------~--~g~-~~~tvGGaia~~a~G~~~~~~G~~~d~V-------~~~evV~~d 175 (481)
T 4feh_A 121 LMKAALPF--------GLWVPV-------L--PGT-RQVTVGGAIACDIHGKNHHSAGSFGNHV-------RSMDLLTAD 175 (481)
T ss_dssp HHHHHGGG--------TEECSC-------C--CSC-SCCBHHHHHHTTCCCTTHHHHCCGGGGE-------EEEEEECTT
T ss_pred HHHHHHHc--------CCEEEE-------e--CCc-CccccCCccccccCCCCcccCCCccceE-------eEEEEEeCC
Confidence 99887643 011111 1 222 246999999875321 1111211 245666667
Q ss_pred e-eEEEech----hhcc--CCCCCCCceEEEEEecCCC
Q 001024 375 K-CEKLMLE----EFLE--RPPLDSRSILLSVEIPCWD 405 (1185)
Q Consensus 375 g-~R~vpl~----dF~~--~~~l~~~EiI~~I~iP~~~ 405 (1185)
| .++++-+ |+|. ...+..--||+++.|...+
T Consensus 176 G~v~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p 213 (481)
T 4feh_A 176 GEIRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTP 213 (481)
T ss_dssp SCEEEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEE
T ss_pred CCEEEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEe
Confidence 7 4556554 5442 2233445599999886543
No 39
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=94.60 E-value=0.025 Score=70.37 Aligned_cols=110 Identities=12% Similarity=0.067 Sum_probs=75.0
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc--ccc--cCCCCeeEeCCCCCCCCceEEcCCeEEecccccH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKE--VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTI 298 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~--~k~--~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl 298 (1185)
+.-.++|+|.+|..++++-... .+-...+.+|||++.- ... .....++||++++.....|..++..++++|+|++
T Consensus 206 P~aVV~P~s~eeV~~iv~~A~~-~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~ 284 (658)
T 4bby_A 206 PDIVLWPTCHDDVVKIVNLACK-YNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITG 284 (658)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBH
T ss_pred cCEEEeeCCHHHHHHHHHHHHH-CCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchH
Confidence 4568999999999998863210 1234566799999743 111 1233478999986655555667789999999999
Q ss_pred HHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCccccccc
Q 001024 299 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 350 (1185)
Q Consensus 299 ~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p 350 (1185)
.+|.+.+..+ ...+| -.|+=.+.+||||||++...
T Consensus 285 ~~L~~~L~~~--------Gl~lp---------~dP~S~~~aTIGG~iAtna~ 319 (658)
T 4bby_A 285 QELERQLKES--------GYCTG---------HEPDSLEFSTVGGWISTRAS 319 (658)
T ss_dssp HHHHHHHHHH--------TEECC---------CCCTTTTTCBHHHHHHHTCC
T ss_pred HHHHHHHHHc--------CCccC---------CCCCCccccEEeehhhcCCC
Confidence 9999887653 11111 13455678999999997755
No 40
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=94.22 E-value=0.031 Score=66.86 Aligned_cols=109 Identities=17% Similarity=0.165 Sum_probs=73.2
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 302 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 302 (1185)
...+++|+|.+|+.++++-... .+-...+.+|||++.-.........+||++++.....|..++..++++|++++.+|.
T Consensus 52 p~~vv~P~s~eeV~~~v~~a~~-~~~pv~~~GgGt~~~g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~ 130 (476)
T 3pm9_A 52 SPLVLRPGSTEEVVAICKLANE-ARVALVPQGGNTGLVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQ 130 (476)
T ss_dssp CSCEECCCSHHHHHHHHHHHHH-HTCCEEEESSSCCSSSTTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHH
Confidence 3468899999999887763211 134678899999984211101237899999866544455567899999999999998
Q ss_pred HHHHHhhhhhhhhhHhhHHHHHHHHHhhh-chhhhcccccCCccccccc
Q 001024 303 EALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 350 (1185)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~p~L~~~~~~ia-s~qIRN~aTiGGNI~~a~p 350 (1185)
+.+..+ .. .++ .+.-...+||||+|++...
T Consensus 131 ~~l~~~--------Gl----------~~~~~~~s~~~~tvGG~ia~nag 161 (476)
T 3pm9_A 131 EKAAEV--------DR----------LFPLSLGAQGSCTIGGNLSTNAG 161 (476)
T ss_dssp HHHHHT--------TE----------ECCCCCTTTTTCBHHHHHHHTCC
T ss_pred HHHHHh--------CC----------ccCCCCCCCCcEEEccccCCCCC
Confidence 876643 00 111 2333557999999976544
No 41
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=93.60 E-value=0.039 Score=67.64 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=71.4
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc--cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 299 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~--~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~ 299 (1185)
....++|+|.+|+.++++-... .+-...+.+|||++.- .... ....++||++++.....|..++..++++|++++.
T Consensus 138 p~~vv~P~s~eeV~~iv~~a~~-~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~ 216 (584)
T 2uuu_A 138 PDLIVLPHSHEEVERLVQLAHK-YNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGP 216 (584)
T ss_dssp CSEEECCCSHHHHHHHHHHHHH-HTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHH
T ss_pred CCEEEeCCCHHHHHHHHHHHHH-cCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHH
Confidence 3468899999999988763210 1345778899999852 2211 1234679998765443344445789999999999
Q ss_pred HHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCccccccc
Q 001024 300 KAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 350 (1185)
Q Consensus 300 ~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p 350 (1185)
+|.+.+..+ ...+ -..|.--..+||||||++...
T Consensus 217 ~l~~~l~~~--------Gl~~---------~~~p~s~~~~tvGG~ia~na~ 250 (584)
T 2uuu_A 217 ELEKQLHKQ--------GVSL---------GHDPDSFEFSTLGGWLATCSS 250 (584)
T ss_dssp HHHHHHHHT--------TEEC---------CCCCTTGGGCBHHHHHHHTCC
T ss_pred HHHHHHHHc--------CCee---------CcCCCccCCeeEeeeccCCCC
Confidence 999887653 0111 012222355899999987654
No 42
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=92.98 E-value=0.2 Score=57.38 Aligned_cols=108 Identities=11% Similarity=0.089 Sum_probs=70.9
Q ss_pred ccccC-CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEc----CCeEEe
Q 001024 218 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD----QTGIEI 292 (1185)
Q Consensus 218 ~~~~~-~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~----~~~l~I 292 (1185)
+.+.+ .-.+++|.|.+|+.++++.... .+-...++.|||.+.+-.. ....+|+++ |+.|+.. +..+++
T Consensus 25 ~~igg~a~~vv~p~s~eel~~~v~~a~~-~~ipv~vlGgGSNll~~d~--~~GvVI~l~----~~~i~v~~~~~~~~v~v 97 (357)
T 3i99_A 25 FGIEQLAAQLVVAESIDDLKALYCSAEW-ASLPKLIIGKGSNMLFTCH--YTGMIVVNR----LNGIEHQQDDDYHRLHV 97 (357)
T ss_dssp TCCSCEEEEEEEECSHHHHHHHHSSSTT-TTSCEEEESSCTTEEECSC--EEEEEEEEC----CCCEEEEECSSEEEEEE
T ss_pred CCCCccceEEEEECCHHHHHHHHHHHHH-cCCCEEEECCCcCcccCCC--CCeEEEEcC----CCceEEeccCCceEEEE
Confidence 44445 5679999999999999874211 2346788999998855322 346788885 4555543 237999
Q ss_pred cccccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCccccccc
Q 001024 293 GATVTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 350 (1185)
Q Consensus 293 GA~vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p 350 (1185)
||++++.+|.+....+ .+. -+...++.+ +||||++++...
T Consensus 98 ~AG~~~~~l~~~a~~~----------Gl~----GlE~l~gIP----GtVGGav~~NaG 137 (357)
T 3i99_A 98 AGGEDWPSLVSWCVEQ----------GIG----GLENLALIP----GCAGSAPIQNIG 137 (357)
T ss_dssp ETTSBHHHHHHHHHHT----------TCT----TCGGGTTCC----SBGGGTTTTTCE
T ss_pred eCCCcHHHHHHHHHHc----------CCc----CccccCCCC----chhHHHHHhchh
Confidence 9999999999876643 010 122233333 799999977544
No 43
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=92.89 E-value=0.094 Score=63.91 Aligned_cols=110 Identities=21% Similarity=0.061 Sum_probs=69.5
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc--cccc---CCCCeeEeCCCCCCCCceEEcCCeEEeccccc
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV---EHYDKYIDIRYIPELSVIRRDQTGIEIGATVT 297 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~--~k~~---~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vT 297 (1185)
....++|+|.+|+.++++-... .+-...+.+|||++.- .... .+..++||++++..+..|. ++..++++|+++
T Consensus 46 p~~Vv~P~s~~eV~~iv~~a~~-~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~ 123 (571)
T 1f0x_A 46 ALAVVFPGSLLELWRVLKACVT-ADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTT 123 (571)
T ss_dssp CSEEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCB
T ss_pred ccEEEeeCCHHHHHHHHHHHHH-cCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcC
Confidence 3468899999999988763211 1335677899999842 1111 1136899998754332232 246899999999
Q ss_pred HHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCccccccc
Q 001024 298 ISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQR 350 (1185)
Q Consensus 298 l~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p 350 (1185)
+.+|.+.+..+ ...+|. .+++.. ..+||||+|++...
T Consensus 124 l~~L~~~l~~~--------Gl~~p~------~~g~s~--~~~tvGG~ia~nag 160 (571)
T 1f0x_A 124 LYSLEKALKPL--------GREPHS------VIGSSC--IGASVIGGICNNSG 160 (571)
T ss_dssp HHHHHHHHGGG--------TEECSC------CCGGGG--GTCBHHHHHHTTCC
T ss_pred HHHHHHHHHhc--------CccCCc------CCCccC--CCceecccccCCCC
Confidence 99999887653 111110 112211 36799999988654
No 44
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=92.58 E-value=0.48 Score=59.84 Aligned_cols=188 Identities=17% Similarity=0.158 Sum_probs=115.3
Q ss_pred cCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCccccHHHHHHH
Q 001024 769 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACA 837 (1185)
Q Consensus 769 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aA 837 (1185)
++..++.+..+.||.++|+++++.. ..+.+.+|+.||||.++|+|.. +.-+|.+|++.+.. ...++-
T Consensus 457 ~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~--~G~Av~ 534 (769)
T 1rm6_A 457 EPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFM--VGNASI 534 (769)
T ss_dssp CCSEEEEEEECTTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHH--HHHHHH
T ss_pred CCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHHH--HHHHHH
Confidence 3567788888889999999998766 5578899999999999999986 45678888876422 111222
Q ss_pred HH------------HHhCCCC---EE-----------------------------------EEeChhhhhhhcCC-----
Q 001024 838 LA------------AYKLCRP---VR-----------------------------------IYVKRKTDMIMVGG----- 862 (1185)
Q Consensus 838 la------------A~~~gRP---Vr-----------------------------------l~~sReed~~~~~~----- 862 (1185)
.| |..++.+ +. -.+.-+..+...+.
T Consensus 535 ~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 614 (769)
T 1rm6_A 535 SAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSA 614 (769)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECCCGGGSCCTTCGGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHeEEeCCEEEEccCCCCccCHHHHHHhhhhcccccccccceeccccccccccccccc
Confidence 22 2222211 00 00110001100010
Q ss_pred ---CC--ce-EEEEEEEeCCC-CcEEEEEEEEEeeCCCCCCCC----cc-------hhhhc------------cccCCCc
Q 001024 863 ---RH--PM-KITYSVGFKSN-GKITALQLNILIDAGLSPDVS----PI-------MPSNM------------IGALKKY 912 (1185)
Q Consensus 863 ---R~--~~-~~~~k~g~~~d-G~i~a~~~~~~~d~Ga~~~~s----~~-------~~~~~------------~~~~~~Y 912 (1185)
.. ++ -.-.++-+|.+ |++.=.++....|+|-..+-. .+ +..++ .....-|
T Consensus 615 ~~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~G~~~~~~~~dY 694 (769)
T 1rm6_A 615 IGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDY 694 (769)
T ss_dssp TTCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEETTEESCCSTTTS
T ss_pred cCCCCCcceEEEEEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHhHHHHHHHHHhcceeEecCCEeCCCChhhc
Confidence 11 22 23477888875 999999999999999765421 00 00000 1122446
Q ss_pred ccCcE----EEEEEEeecCCCCCCcc--CCCChhHHHHHHHHHHHHHHHHcCC
Q 001024 913 DWGAL----HFDIKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTLSM 959 (1185)
Q Consensus 913 ~ipn~----~~~~~~v~TN~~~~ga~--Rg~G~~q~~fa~E~~mDelA~~lG~ 959 (1185)
.+|.. .++...+.+..+ .++| +|.|.+...-+.=.+.+-+.+.+|.
T Consensus 695 ~ip~~~D~P~i~v~~ve~~~~-~~p~GaKGvGE~~~~~~~~AIaNAv~~A~G~ 746 (769)
T 1rm6_A 695 RVPTIVESPDIEVIIVESMDP-NGPFGAKEASEGMLAGFLPAIHEAVYEAVGV 746 (769)
T ss_dssp CCCCTTTCCEEEEEEECCCCT-TSGGGCCCCSSTTTTTHHHHHHHHHHHHHSC
T ss_pred cCCCcccCCCEEEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 55533 467777888655 4676 8999887766666788888888875
No 45
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=92.12 E-value=0.15 Score=62.22 Aligned_cols=110 Identities=13% Similarity=0.079 Sum_probs=69.9
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccc-c--CCCCeeEeC-CCCCCCCceEEcCCeEEecccccH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE-V--EHYDKYIDI-RYIPELSVIRRDQTGIEIGATVTI 298 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~-~--~~~~~lIdl-~~I~EL~~I~~~~~~l~IGA~vTl 298 (1185)
..-.++|+|.+|+.++++-... .+-...+.+|||.+.+ .. . ....++||+ +++.....|..++..++++++|++
T Consensus 71 p~~Vv~P~s~~eV~~iv~~a~~-~~~pv~~~g~Gt~~~~-gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~ 148 (560)
T 1e8g_A 71 ASAIVAPRNVADVQSIVGLANK-FSFPLWPISIGRNSGY-GGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTY 148 (560)
T ss_dssp CSEEECCSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTT-TTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBH
T ss_pred CcEEEeCCCHHHHHHHHHHHHH-cCCcEEEecCCCcCCc-CCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCH
Confidence 4568999999999988763210 1234556689999854 11 1 134689999 765433333344678999999999
Q ss_pred HHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhh-chhhhcccccCCccccccc
Q 001024 299 SKAIEALKEETKEFHSEALMVFKKIAGHMEKIA-SRFIRNSASVGGNLVMAQR 350 (1185)
Q Consensus 299 ~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ia-s~qIRN~aTiGGNI~~a~p 350 (1185)
.+|.+.+..+ ... + .++ .+.-.+.+|+|||+++...
T Consensus 149 ~~l~~~l~~~--------Gl~-~-------~~~~~p~~~~~~tigG~~~~~g~ 185 (560)
T 1e8g_A 149 HDLHNYLEAN--------NLR-D-------KLWLDVPDLGGGSVLGNAVERGV 185 (560)
T ss_dssp HHHHHHHHHT--------TCT-T-------TEECCCCSSTTSBHHHHHHTTCB
T ss_pred HHHHHHHHHc--------CCc-c-------ccCCCCCCCCccchhhhccCCCC
Confidence 9998876643 000 0 011 2333448999999875543
No 46
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=91.97 E-value=0.52 Score=59.74 Aligned_cols=184 Identities=16% Similarity=0.099 Sum_probs=112.4
Q ss_pred CCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE-----cccCCCCCCCCccccHHHHHHHHHH
Q 001024 771 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT-----RRVGGAFGGKAIKAMPVATACALAA 840 (1185)
Q Consensus 771 p~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~-----~~vGGgFGgK~~~~~~~~~~aAlaA 840 (1185)
..++.+..+.||.++|+++++.. +.+.+.+|+.||||.++|+|.. +.-+|.+|++.+.. ...++-.||
T Consensus 484 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~~p~~~~t~aSr~t~~--~G~Av~~Aa 561 (788)
T 1t3q_B 484 HDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAVI--GAGSIGRAA 561 (788)
T ss_dssp CBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTSCCBCCSCTTCHHHH--HHHHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCccchHHHH--HHHHHHHHH
Confidence 35678888889999999998765 5578899999999999999986 56678888886422 222222333
Q ss_pred HhCCC------------C---EEEE-------------eChhh----------hhhh------------cCCCC--ce-E
Q 001024 841 YKLCR------------P---VRIY-------------VKRKT----------DMIM------------VGGRH--PM-K 867 (1185)
Q Consensus 841 ~~~gR------------P---Vrl~-------------~sRee----------d~~~------------~~~R~--~~-~ 867 (1185)
.++++ + +.+. ++-.| ++.. .+... ++ -
T Consensus 562 ~~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ga 641 (788)
T 1t3q_B 562 SIVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGG 641 (788)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTCCCCCEEEEECCCSSCEEEEEE
T ss_pred HHHHHHHHHHhHhhhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhcCcccccCccCCcccccccCCCCCCcceEE
Confidence 33211 0 0000 00000 1110 00000 22 2
Q ss_pred EEEEEEeCCC-CcEEEEEEEEEeeCCCCCCCC----cc-------hhhhc-------------cccCCCcccCcE----E
Q 001024 868 ITYSVGFKSN-GKITALQLNILIDAGLSPDVS----PI-------MPSNM-------------IGALKKYDWGAL----H 918 (1185)
Q Consensus 868 ~~~k~g~~~d-G~i~a~~~~~~~d~Ga~~~~s----~~-------~~~~~-------------~~~~~~Y~ipn~----~ 918 (1185)
.-.++-+|.+ |++.=.++....|+|-..+-. .+ +..++ .....-|.+|.. .
T Consensus 642 ~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~ 721 (788)
T 1t3q_B 642 HAAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVPD 721 (788)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCTTSCBCCCSTTTSCCCCTTTCCC
T ss_pred EEEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHHhHHHHHHHHhcceeEECCCCCCCCCChhhccCCCcccCCC
Confidence 2367778875 999999999999999765421 00 00000 111234654432 4
Q ss_pred EEEEEeecCCCCCCcc--CCCChhHHHHHHHHHHHHHHHHc
Q 001024 919 FDIKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTL 957 (1185)
Q Consensus 919 ~~~~~v~TN~~~~ga~--Rg~G~~q~~fa~E~~mDelA~~l 957 (1185)
++...+.+..+ .++| +|.|.+...-+.=.+.+-|.+.+
T Consensus 722 i~v~~ve~~~~-~~p~GaKGvGE~~~~~~a~AiaNAI~~A~ 761 (788)
T 1t3q_B 722 IRIRHLETPSP-LVPGGIKGMGESAMISAPAAVVAAVNDAL 761 (788)
T ss_dssp EEEEECCCCCT-TSGGGBCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHH
Confidence 56667777655 5676 79999998888878888888888
No 47
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=91.93 E-value=0.11 Score=62.91 Aligned_cols=84 Identities=12% Similarity=0.211 Sum_probs=56.9
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc-cccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY-YKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~-~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~ 300 (1185)
..-+++|+|.+|+.++++-... .+-...+++|||.+.+ -... .....+||++++.....|..++..++++|++++.+
T Consensus 57 p~~vv~P~s~~ev~~~v~~a~~-~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~ 135 (520)
T 1wvf_A 57 PSAAVTATTVEQVQGVVKICNE-HKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQ 135 (520)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-CCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHH
Confidence 4568999999999988763210 1234667779999854 1110 13468999987543323333467899999999999
Q ss_pred HHHHHHH
Q 001024 301 AIEALKE 307 (1185)
Q Consensus 301 l~~~~~~ 307 (1185)
|.+.+..
T Consensus 136 l~~~l~~ 142 (520)
T 1wvf_A 136 MYDYIQE 142 (520)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9888764
No 48
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=91.76 E-value=0.17 Score=61.17 Aligned_cols=107 Identities=10% Similarity=0.072 Sum_probs=70.2
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEE-----cC--CeEEeccc
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR-----DQ--TGIEIGAT 295 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~-----~~--~~l~IGA~ 295 (1185)
..-.++|+|.+|+.++++-.....+-...+.+|||++.-.. .....++||++++..+ .|.. ++ ..++++|+
T Consensus 62 P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~-~~~~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aG 139 (524)
T 2exr_A 62 PLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQA-MAEGGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGG 139 (524)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTT-CCTTSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETT
T ss_pred CCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcc-cCCCEEEEECcCCCCc-EEeecccCCCCCceEEEEeCC
Confidence 34688999999999988632100134577889999984211 1124689999876655 5665 34 58999999
Q ss_pred ccHHHHHHHHH-HhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccc
Q 001024 296 VTISKAIEALK-EETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ 349 (1185)
Q Consensus 296 vTl~~l~~~~~-~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~ 349 (1185)
+++.++.+... .+ . | ...++.--+.+||||+|++..
T Consensus 140 v~~~~l~~~~l~~~---------G----l-----~~~~~~s~~~~tiGG~va~ng 176 (524)
T 2exr_A 140 ALWEDVLKRCVSEY---------G----L-----APRSWTDYLGLTVGGTLSNAG 176 (524)
T ss_dssp CBHHHHHHHHHHHH---------S----E-----ECSCCCSCCSSBHHHHHTTCC
T ss_pred cCHHHHHHHHHHHc---------C----C-----CCCCCCcCCceeecccCCCCC
Confidence 99999865433 21 0 1 023333346799999999864
No 49
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=91.13 E-value=4.5 Score=51.38 Aligned_cols=186 Identities=14% Similarity=0.131 Sum_probs=113.5
Q ss_pred CCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCccccHHHHHHHHH
Q 001024 771 TQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACALA 839 (1185)
Q Consensus 771 p~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aAla 839 (1185)
..++.+..+.||.++|+++++.. +.+.+.+|+.||||.++|+|.. +.-+|.+|++.+... ..++-.|
T Consensus 506 ~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~--G~Av~~A 583 (809)
T 1n62_B 506 FDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTA--GAATAVA 583 (809)
T ss_dssp CEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTH--HHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHHH--HHHHHHH
Confidence 35678888889999999998766 4577899999999999999985 456888999876432 2222333
Q ss_pred HHhCCC------------C----------EEE------EeChhhhhhh-------------------cC--CCCce-EEE
Q 001024 840 AYKLCR------------P----------VRI------YVKRKTDMIM-------------------VG--GRHPM-KIT 869 (1185)
Q Consensus 840 A~~~gR------------P----------Vrl------~~sReed~~~-------------------~~--~R~~~-~~~ 869 (1185)
|.++++ + |+. .++-+|-... .+ ...++ -.-
T Consensus 584 a~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ga~~ 663 (809)
T 1n62_B 584 ARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYF 663 (809)
T ss_dssp HHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEECCSSCBCCEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhccCccccccceeeeeccCCCCccceeEEE
Confidence 333220 0 000 0111110000 00 01122 223
Q ss_pred EEEEeCC-CCcEEEEEEEEEeeCCCCCCCC----cc-------hhhhc-------------cccCCCcccCcE----EEE
Q 001024 870 YSVGFKS-NGKITALQLNILIDAGLSPDVS----PI-------MPSNM-------------IGALKKYDWGAL----HFD 920 (1185)
Q Consensus 870 ~k~g~~~-dG~i~a~~~~~~~d~Ga~~~~s----~~-------~~~~~-------------~~~~~~Y~ipn~----~~~ 920 (1185)
.++-+|. .|++.=.++....|+|-..+-. .+ +..++ .....-|.+|.. .++
T Consensus 664 aeVeVD~~TG~v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i~ 743 (809)
T 1n62_B 664 CIMDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPKWE 743 (809)
T ss_dssp EEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEESCSTTTSCCCCTTTSCCCE
T ss_pred EEEEEECCcCeEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCceEECCCCCCCCCChhhccCCChhhCCCeE
Confidence 6777876 7999999999999999765421 00 00000 111234654432 455
Q ss_pred EEEeecCCCCCCcc--CCCChhHHHHHHHHHHHHHHHHc---CC
Q 001024 921 IKVCRTNLPSRSAM--RAPGEVQGSFIAEAVIEHVASTL---SM 959 (1185)
Q Consensus 921 ~~~v~TN~~~~ga~--Rg~G~~q~~fa~E~~mDelA~~l---G~ 959 (1185)
...+.+.. +.++| +|.|.+...-+.=.+.+-|.+.+ |.
T Consensus 744 v~~ve~~~-~~~p~GaKGvGE~~~~~~apAiaNAI~~A~~~~G~ 786 (809)
T 1n62_B 744 TDYTVTPS-PHHPIGAKGVGESPHVGGVPCFSNAVNDAYAFLNA 786 (809)
T ss_dssp EEECCCCC-TTSTTSBCCCTTHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCC-CCCCCCCcccCCcccchHHHHHHHHHHHHHHhcCC
Confidence 56666643 35777 89999988777777888888888 65
No 50
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=90.77 E-value=2.1 Score=54.95 Aligned_cols=136 Identities=33% Similarity=0.613 Sum_probs=124.9
Q ss_pred CccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhc-CCCEEEEec
Q 001024 2 EKSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NGCLITTSE 80 (1185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g~~i~TvE 80 (1185)
+..++.+||++||..+. ++|||.||++|.||||||+| |+++|+||++|+.++ +|++|+|||
T Consensus 16 ~~~~~~~ll~~Lr~~~~--------l~g~k~gC~~G~CGaCtv~v----------dg~~v~sC~~~~~~~~~g~~i~TiE 77 (907)
T 1dgj_A 16 LVSPNDLLVDVLRSQLQ--------LTSVKVGCGKGQCGACTVIL----------DGKVVRACIIKMSRVAENASVTTLE 77 (907)
T ss_dssp EECTTCBHHHHHHHTTC--------CTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTTCEEECGG
T ss_pred ecCCCCcHHHHHHHhcC--------CCccCCCCCCCCcCceEEEE----------CCeEeehhHhHHHHHcCCCcEEEEC
Confidence 34577899999998765 77899999999999999999 899999999999999 999999999
Q ss_pred CCCCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhc--CccccCCCChh
Q 001024 81 GLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA--GNLCRCTGYRP 158 (1185)
Q Consensus 81 g~~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~--gnlCRCtgy~~ 158 (1185)
||++ .+.|||||++|+++|++|||||||||||++++||++ |+.| |++||+++|+ |||||||||.+
T Consensus 78 gl~~-~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~-----~~~p-------~~~~i~~~~~~~gnlcRctgY~~ 144 (907)
T 1dgj_A 78 GIGA-PDCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDE-----NVAP-------SREDVRDWFQKHHNICRCTGYKP 144 (907)
T ss_dssp GTCB-TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHHH-----CSSC-------CHHHHHHHHHHTTCCCSSSCSHH
T ss_pred CCCC-CcccCHHHHHHHHcCCCCCCcChhHHHHHHHHHHhc-----CCCC-------CHHHHHHHHHhcCCCcccccHHH
Confidence 9986 578999999999999999999999999999999954 4666 4999999999 99999999999
Q ss_pred HHHHHHHhhh
Q 001024 159 IADACKSFAA 168 (1185)
Q Consensus 159 i~~a~~~~~~ 168 (1185)
|++|++.++.
T Consensus 145 i~~a~~~aa~ 154 (907)
T 1dgj_A 145 LVDAVMDAAA 154 (907)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999987754
No 51
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=90.66 E-value=0.16 Score=62.04 Aligned_cols=106 Identities=12% Similarity=0.128 Sum_probs=70.0
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc--cccc--CCCCeeEeC-CCCCCCCceEE--cCCeEEeccc
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEV--EHYDKYIDI-RYIPELSVIRR--DQTGIEIGAT 295 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~--~k~~--~~~~~lIdl-~~I~EL~~I~~--~~~~l~IGA~ 295 (1185)
...+++|+|.+|+.++++.... .+-..++++||+++.- +... .....+||+ +++..+ .|.. +...++++|+
T Consensus 36 p~~vv~P~s~~ev~~~v~~a~~-~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~v~aG 113 (561)
T 2i0k_A 36 ATWVCSPKTPQDVVRLANWAHE-HDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVTAGAG 113 (561)
T ss_dssp EEEEECCSSHHHHHHHHHHHHH-HTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEEEETT
T ss_pred CCEEEecCCHHHHHHHHHHHHH-CCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEEEcCC
Confidence 4568999999999998763211 1346788999999743 2111 123578999 776554 4444 4578999999
Q ss_pred ccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCccccc
Q 001024 296 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMA 348 (1185)
Q Consensus 296 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a 348 (1185)
+++.+|.+.+..+ ...+| ... .+ ..+||||.|++.
T Consensus 114 v~l~~L~~~l~~~--------Gl~l~-------~~~--~~-~~~TvGG~i~~~ 148 (561)
T 2i0k_A 114 ASIEAIVTELQKH--------DLGWA-------NLP--AP-GVLSIGGALAVN 148 (561)
T ss_dssp SBHHHHHHHHHHT--------TEECS-------SCC--SC-TTCBHHHHHHTT
T ss_pred CCHHHHHHHHHHc--------CCccc-------ccC--CC-CCcccCCCcccC
Confidence 9999999887643 00111 112 22 568999999764
No 52
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=90.11 E-value=1.8 Score=57.98 Aligned_cols=60 Identities=13% Similarity=0.023 Sum_probs=47.9
Q ss_pred CcCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEE------EcccCCCCCCCCc
Q 001024 768 YMETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVI------TRRVGGAFGGKAI 827 (1185)
Q Consensus 768 ~mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~------~~~vGGgFGgK~~ 827 (1185)
.....++.+....||.++|+++++.. ..+.+.+|+.||+|.++|+|. ++.-+|.+|++.+
T Consensus 1018 ~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t 1088 (1335)
T 3zyv_A 1018 FYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGA 1088 (1335)
T ss_dssp GGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHH
T ss_pred cccceeEEEEEeCCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHH
Confidence 34556778888889999999998765 456788899999999999996 3566788888754
No 53
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=89.56 E-value=0.99 Score=58.04 Aligned_cols=136 Identities=32% Similarity=0.607 Sum_probs=125.1
Q ss_pred CccccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEcccCCCcCCCCCeeccchHhhhHhc-CCCEEEEec
Q 001024 2 EKSLRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKYNPELDQLEDFTISSCLTLLCSV-NGCLITTSE 80 (1185)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g~~i~TvE 80 (1185)
+..++.+||++||..+. ++|||.||++|.||||||+| |+++|+||++|+.++ +|++|+|||
T Consensus 16 ~~~~~~~ll~~Lr~~~~--------l~g~k~gC~~g~CGaCtv~v----------dg~~~~sC~~~~~~~~~g~~i~Tie 77 (907)
T 1vlb_A 16 FVDAEALLSDVLRQQLG--------LTGVKVGCEQGQCGACSVIL----------DGKVVRACVTKMKRVADGAQITTIE 77 (907)
T ss_dssp EECTTSBHHHHHHHTTC--------CTTSCCSSSSSSSCTTEEEE----------TTEEEEGGGCBGGGSCTTCEEECHH
T ss_pred ecCCCChHHHHHHHhcC--------CCeecCCCCCCCcCccEEEE----------CCeEeechHhHHHHHcCCCcEEEEC
Confidence 34567899999998776 77899999999999999999 899999999999999 999999999
Q ss_pred CCCCCCCCCcHHHHHHHhccCCCCCCCCchHHHHHHHHHHhccccCCCCCCCCCCCCCHHHHHHHhc--CccccCCCChh
Q 001024 81 GLGNSKTGFHPIHQRFAGFHASQCGFCTPGMCMSLFSALVDAEKTHRPEPPPGLSKLTISEAEKAIA--GNLCRCTGYRP 158 (1185)
Q Consensus 81 g~~~~~~~~h~iq~a~~~~~~~qCG~CtPG~vm~~~~ll~~~~~~~~~~~~~~~~~~~~~~i~~~l~--gnlCRCtgy~~ 158 (1185)
||++ .+.|||||++|+++|++|||||||||||++++||+ +|+.|+ ++||+++|+ |||||||||.+
T Consensus 78 gl~~-~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~-----~~~~p~-------~~~i~~~~~~~gn~cRctgY~~ 144 (907)
T 1vlb_A 78 GVGQ-PENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLD-----TNADPS-------REDVRDWFQKHRNACRCTGYKP 144 (907)
T ss_dssp HHCB-TTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHT-----TCSSCC-------HHHHHHHHHHTTCCCSSSCSHH
T ss_pred CCCC-CcCcCHHHHHHHHcCCCCCCcChHHHHHHHHHHHH-----cCCCCC-------HHHHHHHHHhcCCCccccchHH
Confidence 9986 57899999999999999999999999999999994 456664 999999999 99999999999
Q ss_pred HHHHHHHhhh
Q 001024 159 IADACKSFAA 168 (1185)
Q Consensus 159 i~~a~~~~~~ 168 (1185)
|++|++.++.
T Consensus 145 i~~a~~~aa~ 154 (907)
T 1vlb_A 145 LVDAVMDAAA 154 (907)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999997764
No 54
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=88.83 E-value=0.89 Score=54.16 Aligned_cols=84 Identities=4% Similarity=0.065 Sum_probs=59.6
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccc-cCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 301 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 301 (1185)
....++|+|.+|+.++++-... .+-...+.+||+++.-+.. ......+||++++.....|..++..+++||++++.+|
T Consensus 37 p~~vv~P~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~l 115 (473)
T 3rja_A 37 PTAIAQTQTTAHIQSAVQCAKK-LNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGHL 115 (473)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHHH
Confidence 5578999999999887763211 2456888999999852111 1234589999885544334445678999999999999
Q ss_pred HHHHHH
Q 001024 302 IEALKE 307 (1185)
Q Consensus 302 ~~~~~~ 307 (1185)
.+.+..
T Consensus 116 ~~~l~~ 121 (473)
T 3rja_A 116 ATVLND 121 (473)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887664
No 55
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=88.72 E-value=0.37 Score=52.96 Aligned_cols=148 Identities=14% Similarity=0.087 Sum_probs=89.2
Q ss_pred ccccC-CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCC-CeeEeCCCCCCCCceEEcCCeEEeccc
Q 001024 218 MLLDV-KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHY-DKYIDIRYIPELSVIRRDQTGIEIGAT 295 (1185)
Q Consensus 218 ~~~~~-~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~-~~lIdl~~I~EL~~I~~~~~~l~IGA~ 295 (1185)
+.+.+ .. +++|+|.+|+.+++. -...++.|||.+.+-.. ... ..+|++++ |+.|+.+ + ++||+
T Consensus 17 ~~igg~a~-vv~p~s~edv~~~v~-------ipv~v~GgGsnll~~d~-~~~~GvVI~l~~---~~~I~vd-~--~v~aG 81 (268)
T 2gqt_A 17 LGVGGPAE-LWTVETREELKRATE-------APYRVLGNGSNLLVLDE-GVPERVIRLAGE---FQTYDLK-G--WVGAG 81 (268)
T ss_dssp SCCCCEEE-EEEECSHHHHHHHTT-------SCEEECSSSSSEEECTT-CCSSEEEEECGG---GGCBCTT-S--EEETT
T ss_pred cccCcceE-EEEeCCHHHHHHHhC-------CCeEEcCCCcCceecCC-CcCCeEEEEcCC---CCCcEEc-C--EEECC
Confidence 34445 34 999999999999882 35788999999865222 223 58899865 5566544 3 99999
Q ss_pred ccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccCCCCCchHHHHHhcCcEEEEEeCCe
Q 001024 296 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRKHFPSDVATVLLGAGAMVNIMTGQK 375 (1185)
Q Consensus 296 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~~~~sD~~~~LlAldA~v~l~s~~g 375 (1185)
+++.+|.+....+ .+. -+...+..+ +||||++++.... |-..+.-.+ + .|++. .+|
T Consensus 82 ~~~~~l~~~~~~~----------Gl~----Gle~~~giP----GtvGGav~~NaGa-yG~e~~d~v--~--~v~vv-~~G 137 (268)
T 2gqt_A 82 TLLPLLVQEAARA----------GLS----GLEGLLGIP----AQVGGAVKMNAGT-RFGEMADAL--E--AVEVF-HDG 137 (268)
T ss_dssp SBHHHHHHHHHHT----------TEE----SCGGGTTCC----CBHHHHHHTTCEE-TTEEGGGGE--E--EEEEE-ETT
T ss_pred CCHHHHHHHHHHc----------CCc----CCccccCcc----chhHHHHHhcccc-CchhHHhhe--e--EEEEE-CCC
Confidence 9999999876643 010 011222222 6888888764432 001121122 2 23344 555
Q ss_pred -eEEEechhhccC---CCCC-CCceEEEEEecCCC
Q 001024 376 -CEKLMLEEFLER---PPLD-SRSILLSVEIPCWD 405 (1185)
Q Consensus 376 -~R~vpl~dF~~~---~~l~-~~EiI~~I~iP~~~ 405 (1185)
.++++-+|.+-+ ..+. .+ ||+++.+...+
T Consensus 138 ~v~~~~~~~l~~~YR~s~~~~~g-IVt~~~~~L~~ 171 (268)
T 2gqt_A 138 AFHVYCPEELGFGYRKSHLPPGG-IVTRVRLKLKE 171 (268)
T ss_dssp EEEEECGGGSCCBTTBCCCSTTC-EEEEEEECCEE
T ss_pred cEEEEchHHcccccCCCCcCCCc-eEEEEEEEEEe
Confidence 566776664322 2222 24 99999997654
No 56
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=88.35 E-value=0.39 Score=43.83 Aligned_cols=49 Identities=16% Similarity=0.295 Sum_probs=30.6
Q ss_pred ccccccc-CCCCCccEEEEcc--cCCCcC-------CCCCeeccchHh-hhHhcCCCEEE
Q 001024 29 SSSVVVK-ASGCGACVVLLSK--YNPELD-------QLEDFTISSCLT-LLCSVNGCLIT 77 (1185)
Q Consensus 29 ~~k~gC~-~G~CGaCtV~~~~--~~~~~~-------~~~~~~v~sCl~-~~~~~~g~~i~ 77 (1185)
|.+.+|+ .|.||.|.|.|.. ..+.+. ....-.+.+|.. |...++|..|.
T Consensus 33 gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq~~~~~d~~g~~v~ 92 (93)
T 1l5p_A 33 SADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACAITLSGENDGAVFE 92 (93)
T ss_dssp CCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGGCEECGGGTTCEEE
T ss_pred cCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeECEECCCCCceEEE
Confidence 5789999 9999999999854 111110 112224677774 45666776553
No 57
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=87.99 E-value=0.26 Score=59.37 Aligned_cols=157 Identities=11% Similarity=0.079 Sum_probs=92.2
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccc--ccccC--CCCeeEeCC-CCCCCCceEEc--CCeEEeccc
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGY--YKEVE--HYDKYIDIR-YIPELSVIRRD--QTGIEIGAT 295 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~--~k~~~--~~~~lIdl~-~I~EL~~I~~~--~~~l~IGA~ 295 (1185)
...+++|+|.+|+.++++.... .+-..++++||+++.- ..... ...++||++ ++..+ .|..+ ...+++||+
T Consensus 30 P~~vv~P~s~eEV~~~Vk~A~~-~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I-~vD~~~~~~tVtV~AG 107 (540)
T 3js8_A 30 DVWTCAPRSADEVVKVANWAKD-NGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM-SIDASGPVAKVTAQAG 107 (540)
T ss_dssp EEEEECCSSHHHHHHHHHHHHH-HTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-EEECSSSSEEEEEETT
T ss_pred ccEEEEcCCHHHHHHHHHHHHH-cCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCE-EECCCCCccEEEEccC
Confidence 4568999999999988763211 1346778899999842 21211 234689995 55544 33332 258999999
Q ss_pred ccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccc-cC---------------CCCCchHH
Q 001024 296 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQ-RK---------------HFPSDVAT 359 (1185)
Q Consensus 296 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~-p~---------------~~~sD~~~ 359 (1185)
+++.+|.+.+..+ . | ++...+ .+ ..+||||.|++.. .. +..+|
T Consensus 108 v~l~~L~~~L~~~--------G-----L--~l~~~~--gi-~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D--- 166 (540)
T 3js8_A 108 ITMEALLTGLEKA--------G-----L--GVTAAP--AP-GDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISN--- 166 (540)
T ss_dssp SBHHHHHHHHHHT--------T-----E--ECSCCC--SC-SCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGG---
T ss_pred CCHHHHHHHHHHc--------C-----C--EEEecC--CC-CCeEEcccccCCCCcccccccccccccccccccHHH---
Confidence 9999998887643 0 0 011112 23 4589999997542 21 11223
Q ss_pred HHHhcCcEEEEEeCC----eeEEEech--hhcc-CCCCCCCceEEEEEecCCC
Q 001024 360 VLLGAGAMVNIMTGQ----KCEKLMLE--EFLE-RPPLDSRSILLSVEIPCWD 405 (1185)
Q Consensus 360 ~LlAldA~v~l~s~~----g~R~vpl~--dF~~-~~~l~~~EiI~~I~iP~~~ 405 (1185)
..++.+|.+.+++ ..++++-+ ||+. ...+..+ ||+++.+...+
T Consensus 167 --~V~~levV~adG~~~~~~i~~~s~~~~DL~a~r~G~G~g-IVTevtlrl~P 216 (540)
T 3js8_A 167 --LVLSLTAVVYDKASGAYALRKFARNDPQIAPLLAHVGRS-LIVEATLQAAP 216 (540)
T ss_dssp --GEEEEEEEEEETTTTEEEEEEEETTSGGGHHHHTCTTSS-CEEEEEEEEEE
T ss_pred --hEEEEEEEcCCCCCceeeEEEeCCCChhHHHHHhcCCCe-EEEEEEEEEEE
Confidence 3355556555544 24555532 4432 1123445 99999886543
No 58
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=87.76 E-value=0.26 Score=59.80 Aligned_cols=156 Identities=11% Similarity=0.033 Sum_probs=90.2
Q ss_pred CcEEEecCCHHHHHHHHHhhcC-CC-CCCcEEEeCCcccccccccCCCCeeEeCCCCCCCC---ceEEc--CCeEEeccc
Q 001024 223 KGSWHSPISVQELRNVLESVEG-SN-QISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELS---VIRRD--QTGIEIGAT 295 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~-~~-~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~---~I~~~--~~~l~IGA~ 295 (1185)
..-.++|+|.+|+.++++-... .. +-...+.+|||++.-... .....+||++++.... .++.+ +..+++||+
T Consensus 69 p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~-~~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aG 147 (534)
T 1w1o_A 69 PAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAF-APGGVVVNMASLGDAAAPPRINVSADGRYVDAGGE 147 (534)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTC-CTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEETT
T ss_pred CCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcC-CCCeEEEECccccccccCccEEEcCCCCEEEECCC
Confidence 3467899999999988763210 01 225677899999743211 2246899998755431 13443 468999999
Q ss_pred ccHHHHHHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccC------CCCCchHHHHHhcCcEEE
Q 001024 296 VTISKAIEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVN 369 (1185)
Q Consensus 296 vTl~~l~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~------~~~sD~~~~LlAldA~v~ 369 (1185)
+++.++.+.+..+ . | ...++.-...+||||++++.... +..+|. .+ .++
T Consensus 148 v~~~~l~~~~~~~---------G----l-----~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~-----v~--~~e 202 (534)
T 1w1o_A 148 QVWIDVLRASLAR---------G----V-----APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISN-----VL--EMD 202 (534)
T ss_dssp CBHHHHHHHHHTT---------T----E-----EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGS-----EE--EEE
T ss_pred cCHHHHHHHHHHC---------C----C-----cccCCCCCCCEEeceeccCCCccccccccccHhhh-----EE--EEE
Confidence 9999998776532 0 0 02222333578999999875432 112221 12 244
Q ss_pred EEeCCee-EEEec---hhhcc--CCCCCCCceEEEEEecCC
Q 001024 370 IMTGQKC-EKLML---EEFLE--RPPLDSRSILLSVEIPCW 404 (1185)
Q Consensus 370 l~s~~g~-R~vpl---~dF~~--~~~l~~~EiI~~I~iP~~ 404 (1185)
+...+|+ .+..- .|+|. ......--|||++.+...
T Consensus 203 vV~~dG~v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~ 243 (534)
T 1w1o_A 203 VITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVE 243 (534)
T ss_dssp EEETTSCEEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEE
T ss_pred EEeCCccEEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEE
Confidence 4456663 34443 24332 111223458898887543
No 59
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=86.96 E-value=0.97 Score=53.60 Aligned_cols=82 Identities=12% Similarity=0.161 Sum_probs=58.3
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 302 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 302 (1185)
...+++|+|.+|+.++++.... .+-...+.+||+++..... .....+||++++..+ .|..++..+++||++++.+|.
T Consensus 39 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~~~l~ 115 (459)
T 2bvf_A 39 PSLIARCLSAGDVAKSVRYACD-NGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNSI-HIDTAGSRARIGGGVISGDLV 115 (459)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCCE-EEETTTTEEEEETTCBHHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCCE-EECCCCCEEEECCCCCHHHHH
Confidence 4568999999999887753211 1356788999999753221 335689999875543 233335689999999999999
Q ss_pred HHHHH
Q 001024 303 EALKE 307 (1185)
Q Consensus 303 ~~~~~ 307 (1185)
+.+..
T Consensus 116 ~~l~~ 120 (459)
T 2bvf_A 116 KEAAK 120 (459)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87654
No 60
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=86.92 E-value=1.2 Score=53.74 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=57.3
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEE--cCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR--DQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~--~~~~l~IGA~vTl~~ 300 (1185)
....++|+|.+|+.++++-... .+-...+.+||+++...........+||++++ +.|+. ++..+++||++++.+
T Consensus 59 p~~vv~p~s~~dv~~~v~~a~~-~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~~ 134 (530)
T 2y3s_A 59 PEEIHLVGSAAEIEQVLSRAVR-SGKRVAVRSGGHCYEDFVANSDVRVVMDMSRL---SAVGFDEERGAFAVEAGATLGA 134 (530)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-TTCCEEEESSCCCSSSTTTCTTCCEEEECTTC---CCEEEETTTTEEEEETTCBHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCcEEEECCCCCCCCCcccCCCeEEEEcccC---CCEEEcCCCCEEEEeCCCCHHH
Confidence 4568999999998887753211 24567889999987542221234689999875 55554 346899999999999
Q ss_pred HHHHHH
Q 001024 301 AIEALK 306 (1185)
Q Consensus 301 l~~~~~ 306 (1185)
|.+.+.
T Consensus 135 l~~~l~ 140 (530)
T 2y3s_A 135 VYKTLF 140 (530)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 61
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=86.91 E-value=1.2 Score=53.33 Aligned_cols=156 Identities=13% Similarity=0.074 Sum_probs=89.6
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccccccc-CCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV-EHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 301 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~-~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 301 (1185)
..-.++|+|.+|+.++++-... .+-...+.+||+++.-.... .....+||++++..+ .|..++..+++||++++.+|
T Consensus 46 P~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~~l 123 (495)
T 3fw9_A 46 PSAIILPGSKEELSNTIRCIRK-GSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLGEL 123 (495)
T ss_dssp CSEEECCCSHHHHHHHHHHHHT-SSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHHHH
Confidence 5678999999999988764321 23457788999997322110 123589999885544 34445678999999999999
Q ss_pred HHHHHHhhhhhhhhhHhhHHHHHHHHHhhhchhhhcccccCCcccccccC------CCCCchHHHHHhcCcEEEEEeCCe
Q 001024 302 IEALKEETKEFHSEALMVFKKIAGHMEKIASRFIRNSASVGGNLVMAQRK------HFPSDVATVLLGAGAMVNIMTGQK 375 (1185)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~p~L~~~~~~ias~qIRN~aTiGGNI~~a~p~------~~~sD~~~~LlAldA~v~l~s~~g 375 (1185)
.+.+..... .-.+| ..+-...+|||++..+.-. +...|.+ + .+++...+|
T Consensus 124 ~~~l~~~g~------gl~~~-----------~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v-----~--~~~vV~adG 179 (495)
T 3fw9_A 124 YYAITESSS------KLGFT-----------AGWCPTVGTGGHISGGGFGMMSRKYGLAADNV-----V--DAILIDANG 179 (495)
T ss_dssp HHHHHHHCS------SEECC-----------CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGE-----E--EEEEECTTC
T ss_pred HHHHHHhcC------Cceec-----------cCCCCCCeEeeeccCCCCcccccCCCchhheE-----E--EEEEEcCCC
Confidence 877553200 00011 1233456788887655432 1112322 2 345555666
Q ss_pred eEEE---echhhcc---CCCCCCCceEEEEEecCC
Q 001024 376 CEKL---MLEEFLE---RPPLDSRSILLSVEIPCW 404 (1185)
Q Consensus 376 ~R~v---pl~dF~~---~~~l~~~EiI~~I~iP~~ 404 (1185)
+..- .=.|+|- +.....--||+++.+...
T Consensus 180 ~i~~~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~ 214 (495)
T 3fw9_A 180 AILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLL 214 (495)
T ss_dssp CEECHHHHCHHHHHHHTTSCTTSSCEEEEEEEECE
T ss_pred CEEEcCCCChhhhhhhhcccCCCcEEEEEEEEEEE
Confidence 4322 1124442 212233459999888553
No 62
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=85.78 E-value=1.4 Score=53.27 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=57.3
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKAI 302 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l~ 302 (1185)
..-.++|+|.+|+.++++-... .+-...+.+||+++...........+||++++... .|..++..+++||++++.+|.
T Consensus 58 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~~~l~ 135 (523)
T 2wdx_A 58 PDYIHLVGSTQQVADAVEETVR-TGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AYDPSMNAFLIEPGNTLSEVY 135 (523)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH-HTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EEETTTTEEEECTTCBHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EEcCCCCEEEEcCCCCHHHHH
Confidence 5568999999998887753211 13467889999987542221234689999875433 233345689999999999998
Q ss_pred HHHH
Q 001024 303 EALK 306 (1185)
Q Consensus 303 ~~~~ 306 (1185)
+.+.
T Consensus 136 ~~l~ 139 (523)
T 2wdx_A 136 EKLY 139 (523)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 63
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=85.63 E-value=1.4 Score=53.21 Aligned_cols=80 Identities=9% Similarity=0.090 Sum_probs=57.1
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEEc--CCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRRD--QTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~~--~~~l~IGA~vTl~~ 300 (1185)
..-.++|+|.+|+.++++-... .+-...+.+||+++...........+||++++ +.|+.+ +..+++||++++.+
T Consensus 56 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~~ 131 (521)
T 2ipi_A 56 PDVVYVVHTADQVVDAVNQAMA-AGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQM---RQVFYDSGKRAFAVEPGATLGE 131 (521)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCGGGCTTCCEEEECTTC---CCEEEETTTTEEEECTTSBHHH
T ss_pred CCEEEEcCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCCcccCCCeEEEecccC---CCeEEeCCCCEEEEeCCcCHHH
Confidence 4568999999998887653211 13467889999987543221234689999875 555544 56899999999999
Q ss_pred HHHHHH
Q 001024 301 AIEALK 306 (1185)
Q Consensus 301 l~~~~~ 306 (1185)
|.+.+.
T Consensus 132 l~~~l~ 137 (521)
T 2ipi_A 132 TYRALY 137 (521)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 64
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=85.19 E-value=1.3 Score=53.03 Aligned_cols=80 Identities=11% Similarity=0.101 Sum_probs=57.2
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCccccccccc-CCCCeeEeCCCCCCCCceEE-cCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEV-EHYDKYIDIRYIPELSVIRR-DQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~-~~~~~lIdl~~I~EL~~I~~-~~~~l~IGA~vTl~~ 300 (1185)
..-+++|+|.+|+.++++-... .+-...+.+||+++...... .....+||++++. .|+. +++.+++||++++.+
T Consensus 43 p~~vv~p~s~~dv~~~v~~a~~-~~~~~~v~ggGh~~~~~~~~~~~~gvvIdl~~l~---~i~~d~~~~v~v~aG~~~~~ 118 (503)
T 1zr6_A 43 PAAIAIPRSTEDIAAAVQCGLD-AGVQISAKGGGHSYGSYGFGGEDGHLMLELDRMY---RVSVDDNNVATIQGGARLGY 118 (503)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH-HTCCEEEESSCCCTTCTTTTSSSSCEEEECTTCC---CEEECTTSCEEEETTCBHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCeEEEECCCcCCCCCcccCCCCcEEEECccCC---CEEECCCCeEEEecCCCHHH
Confidence 4568999999999887753211 13467889999998542221 2346899998755 4544 466899999999999
Q ss_pred HHHHHH
Q 001024 301 AIEALK 306 (1185)
Q Consensus 301 l~~~~~ 306 (1185)
|.+.+.
T Consensus 119 l~~~l~ 124 (503)
T 1zr6_A 119 TALELL 124 (503)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 65
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=84.84 E-value=1.5 Score=52.67 Aligned_cols=80 Identities=15% Similarity=0.224 Sum_probs=57.4
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccccCCCCeeEeCCCCCCCCceEE--cCCeEEecccccHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKEVEHYDKYIDIRYIPELSVIRR--DQTGIEIGATVTISK 300 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~~~~~~~lIdl~~I~EL~~I~~--~~~~l~IGA~vTl~~ 300 (1185)
..-.++|+|.+|+.++++-... .+-...+.+||+++...........+||++++. .|+. ++..+++||++++.+
T Consensus 35 P~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrggGh~~~g~~~~~~~gvvIdl~~l~---~i~vd~~~~~v~v~aG~~~~~ 110 (501)
T 3pop_A 35 PEEFFLPATPDDVVASLQKAVT-EGRGVACRSGGHCGQDFVGTPRRDLVLDLHNLH---AIGPAADGAGVRVGSGATVDQ 110 (501)
T ss_dssp CSEEEECSSHHHHHHHHHHHHH-TTCCEEEESSCCCSSSTTTSSCCSEEEECTTCC---CEEECTTSSSEEEETTCBHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCeEEEEeCCccCCCccccCCCEEEEEecccC---CeEEcCCCCEEEEECCcCHHH
Confidence 4568999999999887763211 244678889999985422212346899998855 4554 456899999999999
Q ss_pred HHHHHH
Q 001024 301 AIEALK 306 (1185)
Q Consensus 301 l~~~~~ 306 (1185)
|.+.+.
T Consensus 111 l~~~l~ 116 (501)
T 3pop_A 111 VQKALF 116 (501)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 66
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=84.70 E-value=1.3 Score=53.23 Aligned_cols=83 Identities=10% Similarity=0.038 Sum_probs=57.8
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccccccc-cCCCCeeEeCCCCCCCCceEEcCCeEEecccccHHHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMGYYKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTISKA 301 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~~~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~~l 301 (1185)
..-.++|+|.+|+.++++-... .+-...+.+||+++..... ......+||++++... .|..+++.+++||++++.+|
T Consensus 54 P~~vv~P~s~~dV~~~v~~a~~-~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~~l 131 (518)
T 3vte_A 54 PLVIVTPSNNSHIQATILCSKK-VGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLGEV 131 (518)
T ss_dssp CSEEECCCSHHHHHHHHHHHHH-HTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHH-cCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHHHH
Confidence 5678999999999887763211 1345778899999744221 1234689999875543 23445678999999999999
Q ss_pred HHHHHH
Q 001024 302 IEALKE 307 (1185)
Q Consensus 302 ~~~~~~ 307 (1185)
.+.+..
T Consensus 132 ~~~l~~ 137 (518)
T 3vte_A 132 YYWINE 137 (518)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877553
No 67
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=81.40 E-value=0.8 Score=42.07 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=24.2
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEc
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~ 47 (1185)
...++|+.|+.. |+. .+.+|+.|.||.|.|.|.
T Consensus 20 ~g~tlL~a~~~~----gi~------i~~~C~~G~Cg~C~v~v~ 52 (97)
T 1a70_A 20 DDVYILDAAEEE----GID------LPYSCRAGSCSSCAGKLK 52 (97)
T ss_dssp TTSCHHHHHHHT----TCC------CCCSSSSSCSSTTEEEEE
T ss_pred CCCcHHHHHHHc----CCC------cccCCCCcCCCCCeEEEc
Confidence 345667666552 443 489999999999999983
No 68
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=81.29 E-value=0.75 Score=41.92 Aligned_cols=62 Identities=13% Similarity=0.188 Sum_probs=36.2
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEccc--CCCcC-C-----CCCeeccchHhhhHhcCCCEE
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLSKY--NPELD-Q-----LEDFTISSCLTLLCSVNGCLI 76 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~~~--~~~~~-~-----~~~~~v~sCl~~~~~~~g~~i 76 (1185)
...++|+.|+. -|+. ...+|+.|.||.|.|.|..- +.... . .....+.+|...+. .+..|
T Consensus 19 ~g~tlL~a~~~----~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~~~~--~~~~v 86 (95)
T 1frr_A 19 EGTTILDAAEE----AGYD------LPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPE--SDLVI 86 (95)
T ss_dssp TTCCHHHHHHH----TTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEES--SCEEE
T ss_pred CCCcHHHHHHH----cCCC------CCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeECEEC--CCEEE
Confidence 34456666644 2443 47899999999999998521 11100 0 01125788987754 35555
Q ss_pred EE
Q 001024 77 TT 78 (1185)
Q Consensus 77 ~T 78 (1185)
.+
T Consensus 87 ~~ 88 (95)
T 1frr_A 87 ET 88 (95)
T ss_dssp EC
T ss_pred EE
Confidence 53
No 69
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=79.67 E-value=1.1 Score=40.92 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=24.3
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEc
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~ 47 (1185)
...++|+.|+.. |+. .+.+|+.|.||.|.|.|.
T Consensus 18 ~g~tlL~a~~~~----gi~------i~~~C~~G~Cg~C~v~v~ 50 (94)
T 1awd_A 18 EDTYILDAAEEA----GLD------LPYSCRAGACSSCAGKVE 50 (94)
T ss_dssp TTSCHHHHHHHT----TCC------CCCSSSSSSSSTTEEEEE
T ss_pred CCCcHHHHHHHc----CCC------CCcCCCCCcCCCCEEEEE
Confidence 445677766552 432 589999999999999983
No 70
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=78.59 E-value=1.1 Score=41.14 Aligned_cols=33 Identities=12% Similarity=0.176 Sum_probs=23.8
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEc
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~ 47 (1185)
...++|+.|+.. |+. .+.+|+.|.||.|.|.|.
T Consensus 20 ~g~tlL~a~~~~----gi~------i~~~C~~G~Cg~C~v~v~ 52 (98)
T 1iue_A 20 EDEYILDASERQ----NVE------LPYSCRGGSCSTCAAKLV 52 (98)
T ss_dssp TTSCHHHHHHHT----TCC------CCCSSCSSSSSTTEEEEE
T ss_pred CCCcHHHHHHHc----CCC------CCCCCCCCcCCCCEEEEe
Confidence 344566666542 442 589999999999999973
No 71
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=77.79 E-value=0.81 Score=42.05 Aligned_cols=32 Identities=19% Similarity=0.249 Sum_probs=23.9
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEE
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLL 46 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~ 46 (1185)
...++|+.|+.. |+. .+.+|+.|.||.|.|.|
T Consensus 23 ~g~tlL~a~~~~----gi~------i~~~C~~G~Cg~C~v~v 54 (98)
T 1jq4_A 23 SDEDVITAALRQ----NIF------LMSSCREGGCATCKALC 54 (98)
T ss_dssp SCCTHHHHHHHH----TCC------CCCSCCSSCCCCCCBCE
T ss_pred CCChHHHHHHHc----CCC------CcCCCCCCCCCCCEEEE
Confidence 345677776552 443 48999999999999988
No 72
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=77.63 E-value=1.2 Score=40.80 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=24.1
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEc
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~ 47 (1185)
...++|+.|+.- |+. .+.+|+.|.||.|.|.|.
T Consensus 22 ~g~tlL~a~~~~----gi~------i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1czp_A 22 DDEYILDAAEEQ----GYD------LPFSCRAGACSTCAGKLV 54 (98)
T ss_dssp TTSCHHHHHHHT----TCC------CCCSSSSSSSSTTEEEEE
T ss_pred CCCCHHHHHHHc----CCC------ccCCCCCCCCCCCeEEEc
Confidence 345667766542 443 478999999999999983
No 73
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=77.39 E-value=2.1 Score=53.95 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=53.6
Q ss_pred cCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEEc------ccCCCCCCCCccccHHHHHHH
Q 001024 769 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVITR------RVGGAFGGKAIKAMPVATACA 837 (1185)
Q Consensus 769 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFGgK~~~~~~~~~~aA 837 (1185)
+.+.++.+....||.++|+++++.. ..+.+.+|+.||||.++|+|... .-+|.+|++.+ .....++.
T Consensus 444 ~~~~~a~v~l~~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t--~~~G~Av~ 521 (755)
T 3nvz_C 444 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVST--DIYGQAVY 521 (755)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHH--HHHHHHHH
T ss_pred CCcceEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHH--HHHHHHHH
Confidence 4567788888889999999998644 35567889999999999999754 45888999864 22333444
Q ss_pred HHHHhC
Q 001024 838 LAAYKL 843 (1185)
Q Consensus 838 laA~~~ 843 (1185)
.||.++
T Consensus 522 ~Aa~~l 527 (755)
T 3nvz_C 522 EACQTI 527 (755)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 455554
No 74
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=75.99 E-value=1.5 Score=39.91 Aligned_cols=32 Identities=9% Similarity=0.203 Sum_probs=23.1
Q ss_pred ccccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEc
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~ 47 (1185)
...++|+.|+.- + ..+.+|+.|.||.|.|.|.
T Consensus 19 ~g~tlL~a~~~~----g-------~i~~~C~~G~Cg~C~v~v~ 50 (93)
T 1wri_A 19 PGERLIDIGSEK----A-------DLPLSCQAGACSTCLGKIV 50 (93)
T ss_dssp TTSCHHHHHHHH----S-------CCCCSSSSSSSSTTEEEEE
T ss_pred CCCcHHHHHHHC----c-------CCCCCCCCCCCCCCEEEEe
Confidence 344566666543 2 1588999999999999983
No 75
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=72.51 E-value=3.9 Score=51.66 Aligned_cols=72 Identities=17% Similarity=0.075 Sum_probs=54.0
Q ss_pred CCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCccccHHHHHHHH
Q 001024 770 ETQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACAL 838 (1185)
Q Consensus 770 Ep~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aAl 838 (1185)
...++.+....||.++|+++++.. ..+.+.+|+.||||.++|+|.. +.-+|.+|++.+. ....++-.
T Consensus 465 ~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~--~~G~Av~~ 542 (777)
T 2w3s_B 465 NQAGALVQIYTDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGAD--MNGMAVKD 542 (777)
T ss_dssp CEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHH--HHHHHHHH
T ss_pred CCCceEEEEccCCeEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHH--HHHHHHHH
Confidence 346678888889999999998655 4567899999999999999974 5668889988652 23334445
Q ss_pred HHHhC
Q 001024 839 AAYKL 843 (1185)
Q Consensus 839 aA~~~ 843 (1185)
||.++
T Consensus 543 Aa~~l 547 (777)
T 2w3s_B 543 ACETL 547 (777)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55554
No 76
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=69.64 E-value=2.7 Score=39.52 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=23.1
Q ss_pred cccHHHHHHHHhhcccccccccccccccc-cCCCCCccEEEEcc
Q 001024 6 RSQALTLLRLCLSSCVITLALRVSSSVVV-KASGCGACVVLLSK 48 (1185)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~gC-~~G~CGaCtV~~~~ 48 (1185)
..++|+.|+. -|+. .+.+| +.|.||.|.|.|..
T Consensus 24 g~tlL~a~~~----~gi~------i~~~C~~~G~Cg~C~v~v~~ 57 (111)
T 1i7h_A 24 GETILDAALR----NGIE------IEHACEKSCACTTCHCIVRE 57 (111)
T ss_dssp TCBHHHHHHH----TTCC------CCCTTSSSSCCSTTEEEEEE
T ss_pred CCcHHHHHHH----cCCC------CcccCCCCCcCCCCEEEEcc
Confidence 3456666543 2443 47899 58999999999853
No 77
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=69.06 E-value=2.7 Score=38.87 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=24.2
Q ss_pred ccccHHHHHHHHhhccccccccccccccccc-CCCCCccEEEEcc
Q 001024 5 LRSQALTLLRLCLSSCVITLALRVSSSVVVK-ASGCGACVVLLSK 48 (1185)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~-~G~CGaCtV~~~~ 48 (1185)
...++|+.|+. -++. ++.+|+ .|.||.|.|.|..
T Consensus 22 ~g~tlL~a~~~----~gi~------i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 22 EGDSILDLAHA----NNID------LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp TTCBHHHHHHH----TTCC------CCCTTTTSSCCSTTEEEECH
T ss_pred CCCHHHHHHHH----cCCC------cCcCCCCCCCcCCCEEEECC
Confidence 34466666654 2443 478999 7999999999853
No 78
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=64.78 E-value=12 Score=43.57 Aligned_cols=71 Identities=17% Similarity=-0.002 Sum_probs=47.6
Q ss_pred ccceEEEEeeCCcEEEEECCcCCCCcchhHHHHHHHHHhcccccCCCCCCCCcEEEEcCCCcccccCccCccchhhHHHH
Q 001024 1038 STPGKVSILSDGSVVVEVGGIEMGQGLWTKVKQMAAFALSSIKCGGTGNLLEKVRVVQADTLSVIQGGFTAGSTTSEASC 1117 (1185)
Q Consensus 1038 ~~~a~V~v~~DGsV~V~~g~~e~GqG~~T~~aQIaA~~Lgi~~~~~~~~p~e~V~v~~~dT~~~p~~~~t~gS~~t~~~g 1117 (1185)
+..+.+..+.||.++|.++.. +.+ .+.+.+|+.||+ |.++|+|.. |.-+|.+|++.....-
T Consensus 188 p~~~~A~~~~~g~l~v~~stQ----~p~-~~r~~vA~~Lgl--------p~~~VrV~~------~~vGGgFG~K~~~~~~ 248 (425)
T 3hrd_A 188 PDAGVSYYDNEGMLTVVVSTQ----NPH-YDRGEVAGMLAL--------PNSKVRIIQ------ATTGGGFGGKLDLSVQ 248 (425)
T ss_dssp CCEEEEEECTTCCEEEEECCS----CHH-HHHHHHHHHTTC--------CGGGEEEEE------CBCCCCTTTTSSCSSH
T ss_pred CceEEEEECCCCeEEEEECCC----CHH-HHHHHHHHHhCC--------ChhhEEEEe------CCCCCCCCCCcccCHH
Confidence 466777776789999998663 333 345568899999 999999974 4557788887654332
Q ss_pred HHHHHHHHHH
Q 001024 1118 QVVRDCCNIL 1127 (1185)
Q Consensus 1118 ~Av~~Ac~~L 1127 (1185)
-.+..+++++
T Consensus 249 ~~aa~~A~~~ 258 (425)
T 3hrd_A 249 CHCALLTYHT 258 (425)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 2333344444
No 79
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=61.56 E-value=14 Score=44.07 Aligned_cols=83 Identities=7% Similarity=0.119 Sum_probs=54.3
Q ss_pred CcEEEecCCHHHHHHHHHhhcCCCCCCcEEEeCCcccc-c-ccc-cCCCCeeEeCCCCCCCCceEEcCCeEEecccccHH
Q 001024 223 KGSWHSPISVQELRNVLESVEGSNQISSKLVAGNTGMG-Y-YKE-VEHYDKYIDIRYIPELSVIRRDQTGIEIGATVTIS 299 (1185)
Q Consensus 223 ~~~~~~P~sl~ea~~ll~~~~~~~~~~a~lvaGgT~l~-~-~k~-~~~~~~lIdl~~I~EL~~I~~~~~~l~IGA~vTl~ 299 (1185)
..-.++|+|.+|..++++-... .+-...+-+||++.. . ... ......+||++++... .|..+...++||+++++.
T Consensus 53 P~~vv~p~~~~~v~~~v~~a~~-~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~ 130 (500)
T 3tsh_A 53 PLYIITPTQVSHIQSAVVCGRR-HSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLG 130 (500)
T ss_dssp CSEEECCSSHHHHHHHHHHHHH-TTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHH-CCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHH
Confidence 3467899999998877652210 123455668888752 2 221 1234578999886543 344456789999999999
Q ss_pred HHHHHHHH
Q 001024 300 KAIEALKE 307 (1185)
Q Consensus 300 ~l~~~~~~ 307 (1185)
++.+.+..
T Consensus 131 ~~~~~l~~ 138 (500)
T 3tsh_A 131 ELYYAIYK 138 (500)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99876553
No 80
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=60.54 E-value=5.2 Score=36.45 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=23.2
Q ss_pred cccHHHHHHHHhhcccccccccccccccccCCCCCccEEEEc
Q 001024 6 RSQALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~~ 47 (1185)
..++|+.|+. -|+. ...+|+.|.||.|.|.|.
T Consensus 23 g~tlL~a~~~----~gi~------i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1frd_A 23 ETTILDGAEE----NGIE------LPFSCHSGSCSSCVGKVV 54 (98)
T ss_dssp TSCHHHHHHH----TTCC------CCCSSSSSSSSTTEEEEE
T ss_pred CCcHHHHHHH----cCCC------cccCCCCCCCCCCEEEEE
Confidence 4456666654 3443 478999999999999983
No 81
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=57.52 E-value=5.5 Score=43.04 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=30.1
Q ss_pred cHHHHHHHHhhcccccccccccccccccCCCCCccEEEE
Q 001024 8 QALTLLRLCLSSCVITLALRVSSSVVVKASGCGACVVLL 46 (1185)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~k~gC~~G~CGaCtV~~ 46 (1185)
++++-++. +...++...+-...+..||.|.||+|+|-.
T Consensus 201 ~m~~~v~~-l~~~gv~~~vs~e~~m~CG~G~C~~C~~~~ 238 (262)
T 1ep3_B 201 AMLKAVAK-KYDQLERLYISMESRMACGIGACYACVEHD 238 (262)
T ss_dssp HHHHHHHH-HTTTCSSEEEECCCCCSSSSSSSCTTEEEE
T ss_pred HHHHHHHH-HHhCCCCEEEEecccccCcccccccCCccc
Confidence 45666666 667777766667788999999999999976
No 82
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=56.91 E-value=9.3 Score=51.01 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=52.8
Q ss_pred cCCCceEEEECCCCcEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEE------cccCCCCCCCCccccHHHHHHH
Q 001024 769 METQTALAVPDEDNCLVVYSSIQCP-----ESAHATIARCLGIPEHNVRVIT------RRVGGAFGGKAIKAMPVATACA 837 (1185)
Q Consensus 769 mEp~~avA~~~~dg~l~V~~sTQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFGgK~~~~~~~~~~aA 837 (1185)
+.+.++.+....||.++|+++++.. ..+.+.+|+.||+|.++|+|.. +..+|.+|++.+. ....++-
T Consensus 1014 ~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~P~~~~t~aSr~t~--~~G~Av~ 1091 (1332)
T 3unc_A 1014 LNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTD--IYGQAVY 1091 (1332)
T ss_dssp GCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHH--HHHHHHH
T ss_pred CCcceEEEEEcCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCccHHHHHH--HHHHHHH
Confidence 4667788888889999999998644 3456778999999999999975 3457888888642 2233344
Q ss_pred HHHHhC
Q 001024 838 LAAYKL 843 (1185)
Q Consensus 838 laA~~~ 843 (1185)
.||.++
T Consensus 1092 ~A~~~l 1097 (1332)
T 3unc_A 1092 EACQTI 1097 (1332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 445444
No 83
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=54.87 E-value=7.5 Score=36.03 Aligned_cols=49 Identities=16% Similarity=0.238 Sum_probs=32.1
Q ss_pred cccccc-CCCCCccEEEEcccC-----CC--------c--CCCCCeeccchHhhh-HhcCCCEEEE
Q 001024 30 SSVVVK-ASGCGACVVLLSKYN-----PE--------L--DQLEDFTISSCLTLL-CSVNGCLITT 78 (1185)
Q Consensus 30 ~k~gC~-~G~CGaCtV~~~~~~-----~~--------~--~~~~~~~v~sCl~~~-~~~~g~~i~T 78 (1185)
....|+ .|.||.|.|.|..-. +. + ..+..-.+.+|.+.+ ..++|..|..
T Consensus 35 i~~~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~g~rLaCq~~~~~dl~gl~v~i 100 (104)
T 3lxf_A 35 LLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTPHSRLSCQITINDKLEGLEVEI 100 (104)
T ss_dssp CCCTTCSSSSCSTTEEEECGGGGGGSCCCCHHHHHHHHTSTTCCTTEEEGGGCBCCGGGTTCEEEE
T ss_pred CCcCCCCCCCCCCCEEEECCcccccCCCCCHHHHHHhccccccCCCcEEEeeCEEccCCCCEEEEe
Confidence 578998 899999999985421 10 0 122333578888755 4567887764
No 84
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=43.97 E-value=8.1 Score=48.85 Aligned_cols=71 Identities=18% Similarity=0.333 Sum_probs=46.9
Q ss_pred cccCCCCCccEEEEccc--CCC-------cCC----CCCeeccchHhhhHhcCCCEEEEecCCCCCCCCC----cHHHHH
Q 001024 33 VVKASGCGACVVLLSKY--NPE-------LDQ----LEDFTISSCLTLLCSVNGCLITTSEGLGNSKTGF----HPIHQR 95 (1185)
Q Consensus 33 gC~~G~CGaCtV~~~~~--~~~-------~~~----~~~~~v~sCl~~~~~~~g~~i~TvEg~~~~~~~~----h~iq~a 95 (1185)
-|..|.|+.|.|.|... +.. .|+ ...+.+.||.+++. +|+.|.|- +... .-+-+-
T Consensus 39 ~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~~~~~~~aC~t~v~--~gm~v~t~------~~~~~~~r~~~le~ 110 (783)
T 3i9v_3 39 LSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVTAVA--DGMVVDTL------SDVVREAQAGMVEF 110 (783)
T ss_dssp SCCCCCSCCSEEEEECC-----------------CCBCSSCEETTTCBCC--SSEEEESS------SHHHHHHHHHHHHH
T ss_pred CCCCcccCCcEEEecccccccccccccccccccccccCCCcccccCCCCC--CCCEEEEC------CHHHHHHHHHHHHH
Confidence 34889999999999421 110 110 02367899999975 79999983 1222 234555
Q ss_pred HHhccCCCCCCCCchH
Q 001024 96 FAGFHASQCGFCTPGM 111 (1185)
Q Consensus 96 ~~~~~~~qCG~CtPG~ 111 (1185)
|..+|-.-|..|..|=
T Consensus 111 ll~nhp~dC~~C~~~g 126 (783)
T 3i9v_3 111 TLLNHPLDCPTCDKGG 126 (783)
T ss_dssp HHTSCCCCTTTCTTGG
T ss_pred HHhcCCCCCccCCCCC
Confidence 6778888999998864
No 85
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=40.17 E-value=17 Score=35.11 Aligned_cols=18 Identities=17% Similarity=0.521 Sum_probs=15.8
Q ss_pred ccccccCCCCCccEEEEc
Q 001024 30 SSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 30 ~k~gC~~G~CGaCtV~~~ 47 (1185)
...+|+.|.||.|.|-|.
T Consensus 59 i~~~C~~G~CgtC~v~v~ 76 (128)
T 1doi_A 59 WPFSCRAGACANCAAIVL 76 (128)
T ss_dssp CCCSSSSSSSSTTEEEEE
T ss_pred CccCCCccCCCCCEeEEe
Confidence 478999999999999884
No 86
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=37.51 E-value=17 Score=33.52 Aligned_cols=20 Identities=10% Similarity=0.310 Sum_probs=16.6
Q ss_pred ccccccc-CCCCCccEEEEcc
Q 001024 29 SSSVVVK-ASGCGACVVLLSK 48 (1185)
Q Consensus 29 ~~k~gC~-~G~CGaCtV~~~~ 48 (1185)
|....|+ .|.||.|.|-|..
T Consensus 34 ~i~~~C~g~G~CgtC~v~v~~ 54 (105)
T 1b9r_A 34 GIVAECGGSCVCATCRIEIED 54 (105)
T ss_dssp CCCCSSTTSSCCCCCCCEECT
T ss_pred CcCcCCCCCCCcCcCEEEECC
Confidence 3578898 6999999999854
No 87
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=33.88 E-value=21 Score=39.76 Aligned_cols=18 Identities=22% Similarity=0.573 Sum_probs=15.7
Q ss_pred ccccccCCCCCccEEEEc
Q 001024 30 SSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 30 ~k~gC~~G~CGaCtV~~~ 47 (1185)
...+|+.|.||.|.|-+.
T Consensus 268 ~~~~C~~G~Cg~C~~~v~ 285 (321)
T 2pia_A 268 VPSSCESGTCGSCKTALC 285 (321)
T ss_dssp CCCSCSSSSSCTTEEEEE
T ss_pred CCCCCCCCCCCCCEEEEe
Confidence 378999999999999874
No 88
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=32.99 E-value=23 Score=34.06 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=31.2
Q ss_pred cccccc-CCCCCccEEEEcccC-----CC----------cCCCCCeeccchHhhhH-hcCCCEEEE
Q 001024 30 SSVVVK-ASGCGACVVLLSKYN-----PE----------LDQLEDFTISSCLTLLC-SVNGCLITT 78 (1185)
Q Consensus 30 ~k~gC~-~G~CGaCtV~~~~~~-----~~----------~~~~~~~~v~sCl~~~~-~~~g~~i~T 78 (1185)
....|+ .|.||.|.|.|..-. +. ...+..-.+.+|.+.+. .++|..|..
T Consensus 56 i~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e~~~g~RLaCQ~~~~~dldgl~V~l 121 (126)
T 3hui_A 56 VEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRPNSRLSCQIKVSNELDGLIVTT 121 (126)
T ss_dssp CCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSSCCTTEEEGGGCBCCGGGTTEEEEC
T ss_pred CccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhhccCCeEEeeeCEECcCCCcEEEEe
Confidence 568998 899999999985421 10 01223345788887554 467777653
No 89
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=32.74 E-value=19 Score=33.11 Aligned_cols=49 Identities=14% Similarity=0.273 Sum_probs=29.6
Q ss_pred cccccc-CCCCCccEEEEccc--C---CCc--------C--CCC-CeeccchHhhhHh-cCCCEEEE
Q 001024 30 SSVVVK-ASGCGACVVLLSKY--N---PEL--------D--QLE-DFTISSCLTLLCS-VNGCLITT 78 (1185)
Q Consensus 30 ~k~gC~-~G~CGaCtV~~~~~--~---~~~--------~--~~~-~~~v~sCl~~~~~-~~g~~i~T 78 (1185)
....|+ .|.||.|.|.|..- + +.+ . ... ...+.+|...+.. ++|..|..
T Consensus 35 i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~d~~~l~v~~ 101 (106)
T 1uwm_A 35 IDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLTCQIKVTSLLDGLVVHL 101 (106)
T ss_dssp CCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEGGGCBCCGGGTTEEEEC
T ss_pred cccCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhcCccccCCCCcEecccCEEccCCCCEEEEe
Confidence 578895 89999999998542 1 110 0 122 3346788875543 55666653
No 90
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=30.70 E-value=22 Score=32.73 Aligned_cols=50 Identities=10% Similarity=0.265 Sum_probs=29.9
Q ss_pred ccccccc-CCCCCccEEEEccc------CCC-------cC--CC-CCeeccchHhhhHh-cCCCEEEE
Q 001024 29 SSSVVVK-ASGCGACVVLLSKY------NPE-------LD--QL-EDFTISSCLTLLCS-VNGCLITT 78 (1185)
Q Consensus 29 ~~k~gC~-~G~CGaCtV~~~~~------~~~-------~~--~~-~~~~v~sCl~~~~~-~~g~~i~T 78 (1185)
|....|+ .|.||.|.|.|..- .+. +. .. ....+.+|...+.. ++|..|..
T Consensus 34 ~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~d~~~l~v~~ 101 (106)
T 1xlq_A 34 DIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLCCQIIMTPELDGIVVDV 101 (106)
T ss_dssp TSCCTTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEGGGCBCCGGGTTEEEEC
T ss_pred CCCcCCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEeeeeeEeecCCCCEEEEe
Confidence 3578895 89999999998543 111 00 02 23346788876543 45666653
No 91
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=29.26 E-value=32 Score=32.03 Aligned_cols=18 Identities=11% Similarity=0.416 Sum_probs=15.2
Q ss_pred cccccc-CCCCCccEEEEc
Q 001024 30 SSVVVK-ASGCGACVVLLS 47 (1185)
Q Consensus 30 ~k~gC~-~G~CGaCtV~~~ 47 (1185)
....|+ .|.||.|.|.|.
T Consensus 38 i~~~C~g~G~CgtC~v~v~ 56 (113)
T 3ah7_A 38 MESACGGVKACTTCHCIVR 56 (113)
T ss_dssp CCCTTCSSSSCSTTEEEEE
T ss_pred CCcCCCCCCCcCCCEEEEc
Confidence 367898 699999999885
No 92
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=27.21 E-value=35 Score=27.83 Aligned_cols=31 Identities=39% Similarity=0.432 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCCCccEEEEEcccCC---CCCCCC
Q 001024 796 AHATIARCLGIPEHNVRVITRRVGG---AFGGKA 826 (1185)
Q Consensus 796 ~r~~vA~~Lglp~~kV~V~~~~vGG---gFGgK~ 826 (1185)
+-+.+++.||+|++.|.|....+-. +|||+.
T Consensus 24 lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (64)
T 3abf_A 24 LTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVL 57 (64)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred HHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 3467888999999999999887775 788874
No 93
>1erd_A Pheromone ER-2; NMR {Euplotes raikovi} SCOP: a.10.1.1
Probab=26.86 E-value=28 Score=25.19 Aligned_cols=28 Identities=21% Similarity=0.507 Sum_probs=24.7
Q ss_pred HHHHHHhccCCCCCCCCchHHHHHHHHH
Q 001024 92 IHQRFAGFHASQCGFCTPGMCMSLFSAL 119 (1185)
Q Consensus 92 iq~a~~~~~~~qCG~CtPG~vm~~~~ll 119 (1185)
-.|+|+.+.-+-||||.--.-|....+-
T Consensus 5 ceqamascehtmcgycqgplymtcigit 32 (40)
T 1erd_A 5 CEQAMASCEHTMCGYCQGPLYMTCIGIT 32 (40)
T ss_dssp HHHHHHHTCGGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHhccccccccccCCeeEEEEeec
Confidence 5789999999999999988888887765
No 94
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=20.68 E-value=50 Score=36.76 Aligned_cols=18 Identities=17% Similarity=0.530 Sum_probs=15.7
Q ss_pred ccccccCCCCCccEEEEc
Q 001024 30 SSVVVKASGCGACVVLLS 47 (1185)
Q Consensus 30 ~k~gC~~G~CGaCtV~~~ 47 (1185)
....|+.|.||.|.|.|.
T Consensus 37 i~~~C~~g~Cg~C~v~v~ 54 (338)
T 1krh_A 37 IPMDCREGECGTCRAFCE 54 (338)
T ss_dssp CSCSCSSSSSCTTEEEEE
T ss_pred cccCCCCcCCCCCEEEEe
Confidence 367899999999999883
Done!