Query 001026
Match_columns 1184
No_of_seqs 539 out of 2050
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 07:10:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n0a_A Tyrosine-protein phosph 100.0 5.8E-65 2E-69 583.8 24.8 309 8-340 16-356 (361)
2 3v0d_A Voltage-sensor containi 100.0 2.4E-64 8.3E-69 575.9 25.0 288 2-310 5-337 (339)
3 1d5r_A Phosphoinositide phosph 100.0 2.2E-53 7.5E-58 486.2 26.4 279 5-311 8-323 (324)
4 1v9d_A Diaphanous protein homo 100.0 3.3E-43 1.1E-47 404.4 20.5 240 925-1164 6-333 (340)
5 3obv_E Protein diaphanous homo 100.0 2.6E-42 8.9E-47 409.3 24.4 232 925-1156 77-396 (457)
6 2j1d_G DAAM1, disheveled-assoc 100.0 5.4E-40 1.9E-44 393.5 23.6 233 924-1157 86-412 (483)
7 4eah_A Formin-like protein 3, 100.0 7.1E-39 2.4E-43 374.9 18.3 223 926-1158 82-395 (402)
8 1ux5_A BNI1 protein; structura 100.0 7E-37 2.4E-41 360.5 19.2 198 955-1154 164-409 (411)
9 2c46_A MRNA capping enzyme; ph 99.7 2.9E-16 9.8E-21 172.1 12.3 135 17-159 40-179 (241)
10 1yn9_A BVP, polynucleotide 5'- 99.6 1.2E-14 4E-19 150.4 12.3 130 19-159 17-151 (169)
11 3rz2_A Protein tyrosine phosph 99.5 7.4E-14 2.5E-18 147.2 13.8 140 10-170 26-172 (189)
12 2img_A Dual specificity protei 99.2 7.7E-11 2.6E-15 118.5 15.5 135 10-170 3-146 (151)
13 4erc_A Dual specificity protei 99.2 1.7E-10 5.8E-15 116.0 16.6 134 11-170 3-145 (150)
14 1ohe_A CDC14B, CDC14B2 phospha 99.2 5.7E-11 2E-15 136.7 13.8 132 11-159 173-307 (348)
15 1rxd_A Protein tyrosine phosph 99.2 1.6E-10 5.4E-15 117.2 12.8 141 11-172 6-153 (159)
16 3s4o_A Protein tyrosine phosph 99.1 3.7E-10 1.3E-14 115.4 12.7 136 15-170 17-165 (167)
17 1fpz_A Cyclin-dependent kinase 99.1 4.6E-10 1.6E-14 120.3 13.6 135 12-158 25-171 (212)
18 1xri_A AT1G05000; structural g 98.9 1E-09 3.5E-14 110.9 7.2 124 12-159 4-129 (151)
19 3rgo_A Protein-tyrosine phosph 98.9 9.2E-09 3.1E-13 104.1 13.4 122 17-159 3-127 (157)
20 2i6j_A Ssoptp, sulfolobus solf 98.8 5.9E-09 2E-13 106.0 8.3 119 16-159 1-127 (161)
21 3ezz_A Dual specificity protei 98.8 1.2E-08 4.1E-13 102.3 9.8 108 37-159 9-119 (144)
22 3f81_A Dual specificity protei 98.8 3.2E-08 1.1E-12 103.2 12.6 128 10-159 22-153 (183)
23 2y96_A Dual specificity phosph 98.8 9.2E-09 3.1E-13 111.0 7.8 142 6-159 22-177 (219)
24 2hcm_A Dual specificity protei 98.6 2.3E-07 7.9E-12 95.0 13.2 117 14-159 10-127 (164)
25 1zzw_A Dual specificity protei 98.6 4.2E-07 1.4E-11 91.5 14.2 118 15-159 3-121 (149)
26 2wgp_A Dual specificity protei 98.6 1.9E-07 6.6E-12 98.3 11.4 122 9-159 19-141 (190)
27 3nme_A Ptpkis1 protein, SEX4 g 98.6 8.4E-08 2.9E-12 108.0 8.7 127 12-159 9-144 (294)
28 2e0t_A Dual specificity phosph 98.5 2.5E-07 8.7E-12 93.2 10.8 122 15-159 1-123 (151)
29 2oud_A Dual specificity protei 98.5 8.1E-07 2.8E-11 92.4 14.8 119 14-159 6-125 (177)
30 3s4e_A Dual specificity protei 98.5 3.2E-07 1.1E-11 91.9 11.3 117 15-159 3-119 (144)
31 1yz4_A DUSP15, dual specificit 98.5 7.7E-07 2.6E-11 90.7 13.9 118 12-159 4-122 (160)
32 2esb_A Dual specificity protei 98.5 8.7E-07 3E-11 93.1 13.4 119 13-159 17-135 (188)
33 3emu_A Leucine rich repeat and 98.4 9.7E-07 3.3E-11 90.5 12.3 121 10-159 4-125 (161)
34 1wrm_A Dual specificity phosph 98.4 1.3E-06 4.5E-11 89.6 13.0 117 13-159 4-121 (165)
35 2g6z_A Dual specificity protei 98.4 5.6E-07 1.9E-11 96.5 10.4 116 15-159 5-121 (211)
36 2hxp_A Dual specificity protei 98.4 1.8E-06 6.2E-11 87.7 13.5 116 16-159 6-123 (155)
37 2nt2_A Protein phosphatase sli 98.4 9.1E-07 3.1E-11 88.6 10.9 116 15-159 3-119 (145)
38 3cm3_A Late protein H1, dual s 98.4 6.4E-07 2.2E-11 92.9 9.7 120 11-159 27-151 (176)
39 2q05_A Late protein H1, dual s 98.3 1.3E-06 4.5E-11 92.3 10.3 119 12-159 45-168 (195)
40 2pq5_A Dual specificity protei 98.3 1.6E-06 5.4E-11 92.4 10.6 124 14-159 44-169 (205)
41 2r0b_A Serine/threonine/tyrosi 98.2 6.7E-06 2.3E-10 83.0 12.3 124 14-159 4-128 (154)
42 2j16_A SDP-1, tyrosine-protein 98.2 2.9E-06 9.9E-11 88.9 9.0 87 61-159 68-155 (182)
43 2hc1_A Receptor-type tyrosine- 97.7 3.4E-05 1.1E-09 86.7 6.2 56 91-147 188-245 (291)
44 2f46_A Hypothetical protein; s 97.6 0.00021 7.2E-09 72.5 11.1 119 12-159 13-138 (156)
45 1p15_A Protein-tyrosine phosph 97.6 2E-05 6.7E-10 86.7 3.6 55 92-147 148-203 (253)
46 1g4w_R Protein tyrosine phosph 97.6 5.1E-05 1.7E-09 88.4 7.2 72 85-158 273-352 (383)
47 1fpr_A Protein-tyrosine phosph 97.6 0.00011 3.6E-09 82.3 8.2 61 85-146 167-230 (284)
48 3mmj_A MYO-inositol hexaphosph 97.6 6.8E-05 2.3E-09 84.3 6.3 70 83-158 182-251 (314)
49 4az1_A Tyrosine specific prote 97.4 0.00014 4.6E-09 82.1 6.7 52 92-147 194-246 (302)
50 2i75_A Tyrosine-protein phosph 97.4 0.00026 8.9E-09 80.5 9.0 65 92-158 210-279 (320)
51 4grz_A Tyrosine-protein phosph 97.4 0.00017 5.7E-09 80.8 6.4 55 92-147 177-233 (288)
52 1jln_A STEP-like ptpase, prote 97.4 0.00012 4.2E-09 82.3 5.2 55 92-147 193-249 (297)
53 3f41_A Phytase; tandem repeat, 97.3 0.00026 9E-09 85.9 8.0 69 84-158 500-568 (629)
54 2oc3_A Tyrosine-protein phosph 97.3 0.00015 5.1E-09 81.8 5.6 53 92-146 199-256 (303)
55 1wch_A Protein tyrosine phosph 97.3 0.00014 4.7E-09 82.6 5.0 51 92-146 214-265 (315)
56 3b7o_A Tyrosine-protein phosph 97.3 0.00017 6E-09 81.8 5.5 55 91-146 209-265 (316)
57 3f41_A Phytase; tandem repeat, 97.3 0.00025 8.6E-09 86.0 6.9 72 80-157 198-270 (629)
58 1yfo_A D1, receptor protein ty 97.2 0.00018 6E-09 81.2 4.9 54 92-147 198-252 (302)
59 2b49_A Protein tyrosine phosph 97.2 0.00016 5.4E-09 81.0 4.3 64 92-158 183-251 (287)
60 3m4u_A Tyrosine specific prote 97.2 0.00017 5.7E-09 81.6 4.4 59 85-147 189-249 (306)
61 1zc0_A Tyrosine-protein phosph 97.2 0.00014 4.7E-09 82.3 3.8 55 92-147 204-260 (309)
62 2bzl_A Tyrosine-protein phosph 97.2 0.00028 9.7E-09 80.4 6.0 55 92-147 215-279 (325)
63 2i1y_A Receptor-type tyrosine- 97.2 0.00015 5.2E-09 81.7 3.5 53 92-146 197-250 (301)
64 2gjt_A Receptor-type tyrosine- 97.2 0.0002 6.8E-09 80.5 4.5 54 91-146 186-242 (295)
65 2cm2_A Tyrosine-protein phosph 97.1 0.0005 1.7E-08 77.6 7.2 50 92-142 185-236 (304)
66 2ooq_A Receptor-type tyrosine- 97.1 0.00032 1.1E-08 78.5 5.3 53 92-146 185-238 (286)
67 1l8k_A T-cell protein-tyrosine 97.1 0.00036 1.2E-08 79.1 5.8 66 92-158 180-251 (314)
68 2p6x_A Tyrosine-protein phosph 97.1 0.00028 9.6E-09 79.8 4.8 52 92-145 193-245 (309)
69 2b3o_A Tyrosine-protein phosph 97.1 0.00044 1.5E-08 84.0 6.5 55 92-147 417-473 (532)
70 2cjz_A Human protein tyrosine 97.1 0.00038 1.3E-08 78.6 5.3 54 92-146 201-257 (305)
71 3i36_A Vascular protein tyrosi 97.0 0.0004 1.4E-08 79.7 5.1 54 92-146 208-263 (342)
72 3s3e_A Tyrosine-protein phosph 97.0 0.00063 2.2E-08 76.9 6.2 55 92-148 208-263 (307)
73 2jjd_A Receptor-type tyrosine- 96.9 0.00057 2E-08 84.1 5.5 55 92-147 490-545 (599)
74 2shp_A SHP-2, SYP, SHPTP-2; ty 96.9 0.00079 2.7E-08 81.6 6.1 55 92-147 423-479 (525)
75 2h4v_A Receptor-type tyrosine- 96.9 0.00053 1.8E-08 77.9 4.3 54 92-147 219-273 (320)
76 4i8n_A Tyrosine-protein phosph 96.7 0.001 3.5E-08 76.7 5.3 53 91-144 212-266 (354)
77 1lar_A Protein (LAR); tyrosine 96.7 0.0011 3.8E-08 81.2 5.5 55 92-147 471-527 (575)
78 4ge6_A Tyrosine-protein phosph 96.6 0.0015 5E-08 74.1 5.7 54 92-146 193-259 (314)
79 1ygr_A CD45 protein tyrosine p 96.6 0.0013 4.6E-08 81.0 5.5 55 92-147 502-566 (610)
80 1lyv_A Protein-tyrosine phosph 96.6 0.0022 7.7E-08 72.3 6.7 59 86-146 187-260 (306)
81 3ps5_A Tyrosine-protein phosph 96.3 0.0037 1.3E-07 76.9 6.6 54 92-146 417-472 (595)
82 1lar_A Protein (LAR); tyrosine 96.3 0.0027 9.1E-08 77.8 5.3 53 92-146 182-235 (575)
83 1ygr_A CD45 protein tyrosine p 96.1 0.0026 8.8E-08 78.5 3.8 53 92-146 196-249 (610)
84 1ywf_A Phosphotyrosine protein 96.0 0.0047 1.6E-07 69.4 5.2 37 119-158 173-209 (296)
85 2jjd_A Receptor-type tyrosine- 95.9 0.0054 1.8E-07 75.5 5.4 52 92-145 196-248 (599)
86 1v9d_A Diaphanous protein homo 95.8 0.013 4.6E-07 66.9 7.7 89 1083-1177 245-339 (340)
87 3gxh_A Putative phosphatase (D 95.7 0.036 1.2E-06 56.1 9.7 115 15-158 14-131 (157)
88 2nlk_A Protein tyrosine phosph 95.5 0.012 4.1E-07 72.8 6.3 61 84-147 485-546 (627)
89 2nlk_A Protein tyrosine phosph 95.3 0.0089 3.1E-07 73.9 4.3 45 100-146 210-254 (627)
90 3obv_E Protein diaphanous homo 95.1 0.019 6.4E-07 68.3 5.9 85 1084-1174 317-407 (457)
91 1ohe_A CDC14B, CDC14B2 phospha 93.8 0.074 2.5E-06 61.0 6.8 65 94-159 50-118 (348)
92 2j1d_G DAAM1, disheveled-assoc 84.6 3.2 0.00011 49.5 10.7 24 1129-1152 374-397 (483)
93 4hpq_C ATG17, KLTH0D15642P; au 83.5 7.2 0.00025 45.4 12.6 38 1075-1112 262-299 (413)
94 3na7_A HP0958; flagellar bioge 83.3 11 0.00037 41.0 13.4 18 1086-1103 56-73 (256)
95 1ux5_A BNI1 protein; structura 80.9 4 0.00014 47.6 9.4 29 926-954 67-96 (411)
96 1ez3_A Syntaxin-1A; three heli 75.8 24 0.00081 33.7 11.7 34 1075-1108 46-79 (127)
97 2p22_C Protein SRN2; endosome, 73.6 46 0.0016 34.7 13.8 50 1092-1148 130-179 (192)
98 3oja_B Anopheles plasmodium-re 72.4 35 0.0012 41.2 14.8 20 1046-1065 468-487 (597)
99 3uul_A Utrophin; spectrin repe 71.5 62 0.0021 29.7 16.5 103 1041-1150 2-104 (118)
100 2v71_A Nuclear distribution pr 70.0 13 0.00046 38.5 8.7 72 1075-1146 73-149 (189)
101 2d1l_A Metastasis suppressor p 69.2 40 0.0014 36.7 12.6 25 1016-1040 58-84 (253)
102 3h0g_A DNA-directed RNA polyme 69.0 0.99 3.4E-05 61.3 0.0 10 105-114 988-997 (1752)
103 3uun_A Dystrophin; triple heli 68.5 72 0.0025 29.2 17.1 103 1041-1150 2-104 (119)
104 2q12_A DIP13 alpha, DCC-intera 68.4 80 0.0027 34.0 15.2 14 988-1001 58-71 (265)
105 1dn1_B Syntaxin 1A, syntaxin b 68.3 1.1E+02 0.0036 33.4 16.1 62 1045-1106 39-100 (267)
106 3uv5_A Transcription initiatio 67.6 85 0.0029 34.1 15.2 23 1094-1116 194-216 (265)
107 4eah_A Formin-like protein 3, 66.9 23 0.00079 41.1 11.0 29 1130-1158 360-388 (402)
108 2ykt_A Brain-specific angiogen 63.7 87 0.003 33.9 14.1 12 1016-1027 56-67 (253)
109 2dfs_A Myosin-5A; myosin-V, in 63.6 67 0.0023 42.0 15.4 94 44-146 82-184 (1080)
110 1deq_A Fibrinogen (alpha chain 63.0 50 0.0017 37.6 12.1 65 1051-1115 63-127 (390)
111 3ghg_A Fibrinogen alpha chain; 63.0 31 0.0011 40.8 10.7 28 1076-1103 85-112 (562)
112 2fic_A Bridging integrator 1; 62.4 68 0.0023 34.2 13.0 22 1124-1145 131-152 (251)
113 2v66_B Nuclear distribution pr 61.3 66 0.0022 30.6 10.8 70 1077-1146 22-96 (111)
114 1s94_A S-syntaxin; three helix 60.9 24 0.00081 36.1 8.6 64 1044-1107 46-109 (180)
115 3t98_B Nucleoporin NUP58/NUP45 59.9 74 0.0025 29.3 10.6 84 1032-1117 4-92 (93)
116 1fio_A SSO1 protein; four heli 59.2 56 0.0019 33.5 11.2 22 1125-1146 89-110 (196)
117 2b5u_A Colicin E3; high resolu 59.1 1.4E+02 0.0047 35.2 14.9 63 1050-1112 316-378 (551)
118 3dwc_A TCMCP-1, metallocarboxy 57.3 18 0.00061 43.2 7.7 39 1104-1142 153-191 (505)
119 3hnw_A Uncharacterized protein 56.0 60 0.002 32.0 10.0 11 994-1004 29-39 (138)
120 3f4a_A Uncharacterized protein 54.1 20 0.00069 36.2 6.6 28 41-68 32-62 (169)
121 3f1i_H Hepatocyte growth facto 54.0 55 0.0019 30.1 8.5 21 1126-1146 64-84 (98)
122 1gs9_A Apolipoprotein E, APOE4 53.7 1.9E+02 0.0065 29.2 15.3 92 1045-1141 55-149 (165)
123 1tt9_A Formimidoyltransferase- 53.5 1.3E+02 0.0046 36.0 14.3 39 1077-1115 387-425 (541)
124 4akv_A Sorting nexin-33; trans 53.4 49 0.0017 38.1 10.5 45 1092-1137 248-292 (386)
125 2q12_A DIP13 alpha, DCC-intera 53.1 1.5E+02 0.0053 31.7 14.0 17 1046-1062 26-42 (265)
126 4a3a_A Amphiphysin; structural 52.5 68 0.0023 34.5 10.8 25 1124-1148 117-141 (243)
127 3qwe_A GMIP, GEM-interacting p 52.3 46 0.0016 36.7 9.4 10 1031-1040 16-25 (279)
128 3fx7_A Putative uncharacterize 52.3 51 0.0017 30.4 8.1 28 1075-1102 12-39 (94)
129 3hoa_A Thermostable carboxypep 51.9 19 0.00063 43.1 6.7 38 1104-1141 163-200 (509)
130 3sjb_C Golgi to ER traffic pro 51.8 60 0.002 29.8 8.4 62 1046-1111 21-84 (93)
131 1cii_A Colicin IA; bacteriocin 50.9 2.4E+02 0.0084 32.8 15.0 12 1173-1184 455-466 (602)
132 3oja_A Leucine-rich immune mol 50.9 60 0.002 38.2 11.0 10 1045-1054 325-334 (487)
133 4h8s_A DCC-interacting protein 50.6 1.2E+02 0.0039 34.9 13.2 8 999-1006 10-17 (407)
134 1m1j_B Fibrinogen beta chain; 47.4 1.8E+02 0.006 34.3 13.8 36 1078-1113 123-158 (464)
135 1m1j_A Fibrinogen alpha subuni 47.3 1.8E+02 0.0062 33.9 13.4 66 1050-1115 60-125 (491)
136 4gkw_A Spindle assembly abnorm 47.0 1.4E+02 0.0048 28.8 10.5 20 1046-1065 16-35 (167)
137 3ghg_B Fibrinogen beta chain; 45.8 89 0.003 36.7 10.8 61 1052-1112 92-152 (461)
138 3caz_A BAR protein; thermo-aci 45.7 1.5E+02 0.0052 30.3 11.1 21 985-1005 45-65 (294)
139 3fx7_A Putative uncharacterize 45.4 97 0.0033 28.6 8.8 32 1076-1107 56-87 (94)
140 2j6p_A SB(V)-AS(V) reductase; 45.0 27 0.00093 34.4 5.8 73 43-132 8-81 (152)
141 3gwk_C SAG1039, putative uncha 44.4 1.7E+02 0.0057 26.1 10.6 52 1046-1098 23-74 (98)
142 3oja_A Leucine-rich immune mol 43.9 3E+02 0.01 32.1 15.6 24 1081-1104 412-435 (487)
143 3na7_A HP0958; flagellar bioge 43.5 3.3E+02 0.011 29.1 17.0 32 1078-1109 92-123 (256)
144 3rf3_A Vinculin, metavinculin; 43.5 3.2E+02 0.011 29.6 14.3 45 1101-1145 133-177 (258)
145 3uv4_A Second bromodomain of h 43.1 67 0.0023 32.2 8.3 24 1094-1117 87-110 (158)
146 2z0v_A SH3-containing GRB2-lik 42.9 97 0.0033 33.0 10.2 50 1088-1142 163-212 (240)
147 1f5n_A Interferon-induced guan 42.9 3.8E+02 0.013 32.5 16.4 12 1075-1086 378-389 (592)
148 2dfs_A Myosin-5A; myosin-V, in 42.7 77 0.0026 41.5 10.9 23 331-353 302-324 (1080)
149 3ok8_A Brain-specific angiogen 41.1 3.5E+02 0.012 28.7 15.5 66 1080-1154 120-185 (222)
150 2d1l_A Metastasis suppressor p 41.0 1.5E+02 0.0051 32.2 11.1 26 1129-1154 118-143 (253)
151 2ykt_A Brain-specific angiogen 40.1 2.1E+02 0.0072 30.9 12.2 18 1096-1113 83-100 (253)
152 3us6_A Histidine-containing ph 39.9 1.9E+02 0.0066 28.6 11.1 26 1075-1100 40-65 (153)
153 4avm_A Bridging integrator 2; 39.9 1E+02 0.0036 32.8 9.8 15 1129-1143 117-131 (237)
154 1uru_A Amphiphysin; endocytosi 39.8 1.4E+02 0.0049 31.2 10.9 23 1125-1147 117-139 (244)
155 2dnx_A Syntaxin-12; snare, HAB 39.3 2.7E+02 0.0092 26.8 13.7 91 1046-1145 19-109 (130)
156 3flh_A Uncharacterized protein 39.2 1.1E+02 0.0039 28.6 9.0 82 41-147 16-98 (124)
157 4fla_A Regulation of nuclear P 37.2 3.3E+02 0.011 27.2 16.3 36 1123-1158 99-134 (152)
158 1i84_S Smooth muscle myosin he 37.0 58 0.002 43.0 8.6 94 45-147 97-198 (1184)
159 3zbh_A ESXA; unknown function, 37.0 1.8E+02 0.0062 25.6 9.6 49 1047-1096 25-73 (99)
160 3hd7_B Syntaxin-1A; membrane p 36.9 1E+02 0.0034 29.0 7.9 30 1085-1114 16-45 (109)
161 1zww_A SH3-containing GRB2-lik 36.8 1.6E+02 0.0056 31.5 10.8 53 1088-1145 179-231 (256)
162 2xhe_B Syntaxin1; exocytosis, 36.6 4.4E+02 0.015 28.5 15.0 62 1045-1106 52-115 (279)
163 3dyt_A Sorting nexin-9; 3-heli 35.9 1.1E+02 0.0036 34.9 9.6 44 1093-1137 229-272 (366)
164 3hq2_A Bacillus subtilis M32 c 35.8 37 0.0013 40.4 5.8 37 1104-1140 152-188 (501)
165 1m1j_C Fibrinogen gamma chain; 35.8 4.1E+02 0.014 30.7 14.4 28 1042-1069 42-69 (409)
166 1oxz_A ADP-ribosylation factor 35.7 1.9E+02 0.0064 29.9 10.4 48 1093-1143 107-154 (186)
167 2vs0_A Virulence factor ESXA; 35.4 2.3E+02 0.0078 24.9 10.3 58 1046-1104 21-78 (97)
168 4hpq_C ATG17, KLTH0D15642P; au 35.3 5.8E+02 0.02 29.5 15.8 21 1128-1148 330-350 (413)
169 2xs1_A Programmed cell death 6 35.2 1.7E+02 0.0057 36.4 11.9 101 1042-1142 557-675 (704)
170 1ykh_A RNA polymerase II media 35.2 1.3E+02 0.0045 28.4 8.2 29 1091-1119 18-46 (108)
171 1ik9_A DNA repair protein XRCC 35.1 1.3E+02 0.0044 31.8 9.2 75 1033-1107 125-207 (213)
172 3okq_A BUD site selection prot 34.4 3.5E+02 0.012 26.7 14.7 89 1046-1142 26-118 (141)
173 4igg_A Catenin alpha-1; asymme 34.3 1.8E+02 0.0062 36.9 11.9 191 963-1166 222-453 (832)
174 2p61_A Hypothetical protein TM 34.1 2.3E+02 0.008 28.5 10.6 84 1029-1113 32-128 (162)
175 3r84_A Mediator of RNA polymer 34.1 2.5E+02 0.0087 25.4 9.6 34 1072-1105 40-73 (86)
176 4aj5_1 SKA3, spindle and kinet 34.0 1.7E+02 0.0058 27.2 8.5 55 1041-1105 42-96 (101)
177 4etr_A Putative uncharacterize 33.9 2.2E+02 0.0075 28.0 10.4 25 1076-1100 41-65 (153)
178 2efk_A CDC42-interacting prote 33.6 4.7E+02 0.016 28.0 16.2 6 1101-1106 134-139 (301)
179 3haj_A Human pacsin2 F-BAR; pa 33.6 4.4E+02 0.015 30.9 14.8 29 1080-1108 133-161 (486)
180 3dby_A Uncharacterized protein 33.3 2.7E+02 0.0093 30.4 11.6 69 963-1040 36-107 (269)
181 4h8s_A DCC-interacting protein 33.3 5.8E+02 0.02 28.9 18.0 29 1080-1108 137-165 (407)
182 1naf_A ADP-ribosylation factor 32.5 1.8E+02 0.0063 29.2 9.4 48 1093-1143 91-138 (158)
183 3vkg_A Dynein heavy chain, cyt 32.3 1.8E+02 0.0062 42.4 12.6 26 46-72 619-644 (3245)
184 1i84_S Smooth muscle myosin he 32.1 53 0.0018 43.4 7.0 27 331-357 328-354 (1184)
185 2efl_A Formin-binding protein 32.1 4.6E+02 0.016 28.1 13.7 31 1085-1115 181-212 (305)
186 4ioe_A Secreted protein ESXB; 31.9 1.6E+02 0.0056 25.8 8.3 25 1072-1096 49-73 (93)
187 1yvi_A Histidine-containing ph 31.1 3.8E+02 0.013 26.1 11.9 26 1075-1100 41-66 (149)
188 3qfl_A MLA10; coiled-coil, (CC 31.0 3.3E+02 0.011 25.4 12.7 28 1042-1069 20-47 (115)
189 1gmx_A GLPE protein; transfera 30.6 48 0.0016 30.3 4.6 75 43-147 8-83 (108)
190 4fla_A Regulation of nuclear P 30.5 1.3E+02 0.0044 30.1 7.9 8 1021-1028 60-67 (152)
191 3vkg_A Dynein heavy chain, cyt 30.5 3.7E+02 0.013 39.4 15.2 13 337-349 856-868 (3245)
192 2ets_A Hypothetical protein; s 30.2 1.7E+02 0.0057 28.5 8.3 23 1075-1097 41-63 (128)
193 3haj_A Human pacsin2 F-BAR; pa 29.8 7.3E+02 0.025 29.0 16.3 10 1031-1040 24-33 (486)
194 1m1j_C Fibrinogen gamma chain; 29.4 5.9E+02 0.02 29.4 14.3 31 1086-1116 41-71 (409)
195 1dow_A Alpha-catenin; four-hel 29.1 3.8E+02 0.013 28.0 11.6 41 1102-1142 94-134 (205)
196 2qup_A BH1478 protein; structu 28.8 4.3E+02 0.015 26.0 11.6 66 1029-1095 22-87 (145)
197 3ajw_A Flagellar FLIJ protein; 28.7 4E+02 0.014 25.5 12.8 14 1127-1140 70-83 (150)
198 3cve_A Homer protein homolog 1 28.5 2.1E+02 0.0071 25.1 7.7 59 1043-1104 9-67 (72)
199 3okq_A BUD site selection prot 28.2 2.9E+02 0.01 27.2 9.6 16 1046-1061 59-74 (141)
200 3ghg_A Fibrinogen alpha chain; 28.0 1.2E+02 0.0041 35.9 8.1 11 1054-1064 63-73 (562)
201 1x79_B RAB GTPase binding effe 27.8 3.7E+02 0.013 25.5 10.0 58 1042-1109 7-64 (112)
202 4ani_A Protein GRPE; chaperone 27.7 4.6E+02 0.016 27.6 11.9 15 1125-1139 111-125 (213)
203 2jtq_A Phage shock protein E; 27.3 61 0.0021 28.2 4.5 30 114-146 36-65 (85)
204 3mq9_A Bone marrow stromal ant 27.1 4.7E+02 0.016 30.1 13.5 7 984-990 327-333 (471)
205 2a9u_A Ubiquitin carboxyl-term 27.0 4.5E+02 0.015 25.9 11.0 24 1015-1040 18-41 (144)
206 1ik9_A DNA repair protein XRCC 27.0 5.1E+02 0.017 27.2 12.2 13 987-999 65-77 (213)
207 1yfs_A Alanyl-tRNA synthetase; 26.7 1E+02 0.0034 36.3 7.1 18 987-1004 295-312 (465)
208 3nr7_A DNA-binding protein H-N 26.7 1.4E+02 0.0047 27.1 6.6 46 1126-1171 26-72 (86)
209 3lnr_A Aerotaxis transducer AE 26.5 2.2E+02 0.0076 28.7 9.1 76 1032-1107 45-126 (175)
210 3d2f_A Heat shock protein homo 26.5 2.7E+02 0.0094 34.2 11.7 13 1102-1114 583-595 (675)
211 3iox_A AGI/II, PA; alpha helix 26.1 5.6E+02 0.019 30.3 13.2 21 1088-1108 46-66 (497)
212 3cvf_A Homer-3, homer protein 26.0 2.6E+02 0.0089 24.9 8.1 59 1043-1104 15-73 (79)
213 1a25_A CALB, protein kinase C 25.9 2.1E+02 0.0071 27.4 8.5 85 181-275 41-127 (149)
214 3gp4_A Transcriptional regulat 25.9 1.6E+02 0.0056 28.7 7.7 9 1057-1065 62-70 (142)
215 2x3v_A Syndapin I, protein kin 25.8 6E+02 0.02 27.9 13.5 38 1078-1115 185-222 (337)
216 4b4t_U RPN8, 26S proteasome re 25.8 62 0.0021 36.6 5.2 26 1043-1068 190-215 (338)
217 3d19_A Conserved metalloprotei 25.8 3.2E+02 0.011 30.0 10.7 30 1011-1040 89-120 (283)
218 2q13_A DCC-interacting protein 25.7 7.4E+02 0.025 27.7 15.8 29 1080-1108 114-142 (385)
219 2k48_A Nucleoprotein; viral pr 25.7 2.2E+02 0.0076 26.6 7.8 62 1041-1108 35-100 (107)
220 2efk_A CDC42-interacting prote 25.5 6.4E+02 0.022 26.9 14.3 37 1080-1116 169-206 (301)
221 1i4d_A Arfaptin 2, partner of 25.5 2.5E+02 0.0084 29.9 9.4 39 1076-1114 88-126 (224)
222 3a7p_A Autophagy protein 16; c 25.5 2.1E+02 0.0071 28.6 8.1 7 1138-1144 121-127 (152)
223 1us7_B HSP90 CO-chaperone CDC3 25.5 6.4E+02 0.022 27.4 12.8 44 1104-1148 104-155 (265)
224 1lw3_A Myotubularin-related pr 25.3 90 0.0031 38.4 6.8 46 120-169 414-459 (657)
225 2zqm_A Prefoldin beta subunit 25.3 4E+02 0.014 24.5 10.7 34 1075-1108 69-102 (117)
226 3gwk_C SAG1039, putative uncha 25.0 3.6E+02 0.012 23.8 13.6 58 1081-1143 13-71 (98)
227 3g5j_A Putative ATP/GTP bindin 24.7 54 0.0018 30.7 3.9 26 120-147 90-115 (134)
228 1o5h_A Formiminotetrahydrofola 24.6 1.2E+02 0.004 32.2 6.7 20 1046-1065 67-86 (214)
229 2c5k_T Syntaxin TLG1, T-snare 24.5 1.6E+02 0.0053 27.1 6.7 22 1079-1100 71-92 (95)
230 3hd7_B Syntaxin-1A; membrane p 24.5 4.2E+02 0.014 24.7 9.9 10 1092-1101 13-22 (109)
231 2q13_A DCC-interacting protein 24.4 4.8E+02 0.017 29.3 12.6 24 1043-1066 23-46 (385)
232 2avr_X Adhesion A; antiparalle 24.1 4.8E+02 0.016 25.0 14.5 58 1044-1111 5-62 (119)
233 3fav_A ESAT-6-like protein ESX 23.8 2E+02 0.007 25.8 7.5 33 1071-1103 46-78 (101)
234 4fi5_A Nucleoprotein; structur 23.7 2E+02 0.0067 27.2 7.1 62 1041-1108 22-87 (113)
235 2dq0_A Seryl-tRNA synthetase; 23.7 3.5E+02 0.012 31.7 11.3 76 1034-1113 29-106 (455)
236 1fio_A SSO1 protein; four heli 23.7 5.7E+02 0.019 25.7 14.7 22 1128-1149 85-106 (196)
237 2nrj_A HBL B protein; enteroto 23.5 1.8E+02 0.0063 32.8 8.6 65 1078-1143 259-323 (346)
238 3hnw_A Uncharacterized protein 23.3 4.2E+02 0.014 25.9 10.0 23 1085-1107 105-127 (138)
239 3qne_A Seryl-tRNA synthetase, 23.3 3E+02 0.01 32.6 10.5 75 1034-1112 31-107 (485)
240 3aco_A Pacsin2, protein kinase 23.2 7.8E+02 0.027 27.1 14.5 15 1076-1090 85-99 (350)
241 1t3j_A Mitofusin 1; coiled coi 23.2 2.5E+02 0.0085 26.0 7.6 21 1080-1100 51-71 (96)
242 1vee_A Proline-rich protein fa 23.2 49 0.0017 31.7 3.3 27 117-146 72-98 (134)
243 1zsq_A Myotubularin-related pr 23.0 1.1E+02 0.0037 36.8 6.8 46 120-169 342-387 (528)
244 4aj5_A SKA1, spindle and kinet 22.8 39 0.0013 30.7 2.2 15 1102-1116 66-80 (91)
245 1eq1_A Apolp-III, apolipophori 22.6 3.6E+02 0.012 26.2 8.8 47 1098-1156 115-161 (166)
246 3hy0_A Alanyl-tRNA synthetase; 22.2 1.1E+02 0.0037 35.7 6.3 19 987-1005 308-326 (441)
247 2jo7_A Glycosylphosphatidylino 22.2 1.5E+02 0.005 30.5 6.4 55 1072-1126 101-162 (224)
248 1t5b_A Acyl carrier protein ph 22.0 2.3E+02 0.0078 28.3 8.3 82 22-110 3-112 (201)
249 3d5a_X RF1, peptide chain rele 22.0 8.9E+02 0.031 27.4 13.6 35 1083-1117 69-103 (354)
250 3caz_A BAR protein; thermo-aci 21.9 6.5E+02 0.022 25.7 19.8 15 994-1008 58-72 (294)
251 3hh0_A Transcriptional regulat 21.8 2.7E+02 0.0091 27.3 8.4 52 1078-1134 82-133 (146)
252 1q06_A Transcriptional regulat 21.8 1.7E+02 0.0057 28.3 6.8 49 1056-1104 59-107 (135)
253 3sja_C Golgi to ER traffic pro 21.7 3.6E+02 0.012 23.1 7.8 51 1046-1105 4-54 (65)
254 4dnd_A Syntaxin-10, SYN10; str 21.6 2.1E+02 0.0071 27.8 7.3 56 1044-1099 70-128 (130)
255 2vs0_A Virulence factor ESXA; 21.6 4E+02 0.014 23.2 11.8 57 1080-1141 10-67 (97)
256 3hzu_A Thiosulfate sulfurtrans 21.5 1E+02 0.0035 34.2 5.9 29 116-146 108-136 (318)
257 3k29_A Putative uncharacterize 21.3 3.4E+02 0.012 27.5 8.8 96 1075-1170 22-124 (169)
258 3f1i_H Hepatocyte growth facto 21.1 4.9E+02 0.017 24.0 9.5 8 1159-1166 88-95 (98)
259 3qh9_A Liprin-beta-2; coiled-c 21.0 2E+02 0.0068 25.7 6.2 27 1042-1068 20-46 (81)
260 3etw_A Adhesin A; antiparallel 21.0 5.6E+02 0.019 24.5 14.7 92 1045-1153 6-97 (119)
261 2r2v_A GCN4 leucine zipper; co 20.9 1.5E+02 0.0051 22.1 4.5 30 1086-1115 4-33 (34)
262 3lay_A Zinc resistance-associa 20.6 3.2E+02 0.011 27.8 8.8 30 1079-1108 74-103 (175)
263 1jth_B Syntaxin 1A; coiled-coi 20.4 1.6E+02 0.0056 25.6 5.8 29 1085-1113 5-33 (77)
264 3gk5_A Uncharacterized rhodane 20.2 63 0.0022 29.7 3.3 28 117-147 53-80 (108)
265 2cc0_A Acetyl-xylan esterase; 20.2 1.1E+02 0.0038 31.1 5.5 85 36-127 73-157 (195)
266 1e0c_A Rhodanese, sulfurtransf 20.2 78 0.0027 33.9 4.5 33 113-147 75-107 (271)
267 1o3x_A ADP-ribosylation factor 20.2 6.2E+02 0.021 24.8 12.4 48 1093-1143 82-129 (140)
268 1fxk_A Prefoldin; archaeal pro 20.2 4.8E+02 0.017 23.5 10.3 36 1075-1110 64-99 (107)
269 4ioe_A Secreted protein ESXB; 20.1 4.3E+02 0.015 22.9 9.4 56 1080-1140 13-69 (93)
No 1
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus}
Probab=100.00 E-value=5.8e-65 Score=583.80 Aligned_cols=309 Identities=19% Similarity=0.323 Sum_probs=253.4
Q ss_pred hccCCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEe
Q 001026 8 FYRKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMD 87 (1184)
Q Consensus 8 ~~~~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~ 87 (1184)
.|.+.+|||+|||+|||||+ ||++++ |+.|||+|++|++||+++|+|| |+|||||++.|+ .++|+++|.+
T Consensus 16 ~~~~~~LDltyIT~riIam~--~P~~~~-e~~yrn~i~~v~~~L~~~H~~~-y~V~NLse~~Yd------~~~f~~~V~~ 85 (361)
T 3n0a_A 16 SYTKGDLDFTYVTSRIIVMS--FPLDSV-DIGFRNQVDDIRSFLDSRHLDH-YTVYNLSPKSYR------TAKFHSRVSE 85 (361)
T ss_dssp EEESSSCEEEESSSSEEEEE--C-------------CHHHHHHHHHHHTTC-EEEEECSSSCCG------GGSCGGGEEE
T ss_pred HhcCCCccEEEEcCCEEEEE--CCCCCc-hhhhcCCHHHHHHHHHHhCCCe-EEEEECCCCCCC------hhhcCCcEEE
Confidence 37788999999999999995 999987 9999999999999999999995 999999987655 3689999999
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh--------
Q 001026 88 YPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY-------- 159 (1184)
Q Consensus 88 ~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~-------- 159 (1184)
|+ |.|+.+|+++.|++||+.|++||+++++|+|+|||++|+|| ||+||||||+|++.+.++++||++|.
T Consensus 86 ~~--~pD~~~P~l~~l~~~~~~i~~~l~~~~~~~v~VHC~aG~GR-tg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~~~~ 162 (361)
T 3n0a_A 86 CS--WPIRQAPSLHNLFAVCRNMYNWLLQNPKNVCVVHCLDGRAA-SSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGL 162 (361)
T ss_dssp CC--CCSSSCCCHHHHHHHHHHHHHHHHHCTTCEEEEEECSCTHH-HHHHHHHHHHHTTSCSSHHHHHHHHHHHSTTCCC
T ss_pred ee--cCCCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-HHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCC
Confidence 96 55677889999999999999999999999999999999999 99999999999999999999999996
Q ss_pred hhchhhhhcccCCCC----CCC----CC-----ccccCCcCC-CCCceeEEEEEecCCCcccCCCCcEEEeCccCcccee
Q 001026 160 KQAPRELLQLMSPLN----PLP----SQ-----LRVIPNFDG-EGGCCPIFRIYGQDPLMVADRTPKVLFSTPKRSKLVR 225 (1184)
Q Consensus 160 ~pSq~ryl~yfs~Ln----~~P----sq-----lr~VP~f~~-~~gcrP~l~Iy~~~~~~~~~~~~~~lfss~~~~~~~~ 225 (1184)
.+||+|||+||..+. ..| .. |++||.|++ .+||||||+||++ .+.||++.+.++.++
T Consensus 163 ~psQ~ryv~yf~~ll~~~~~~P~~~~L~L~~i~l~~iP~f~~~~~GCrP~~~Iy~~---------~~~v~ss~~~~~~~r 233 (361)
T 3n0a_A 163 SPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSPVPFFNKQRNGCRPYCDVLIG---------ETKIYTTCADFERMK 233 (361)
T ss_dssp CHHHHHHHHHHHHHHSSSCCCCCCCCEEEEEEEEESCCCCSTTSSEECEEEEEEET---------TEEEEECCCCGGGSC
T ss_pred CHHHHHHHHHHHHHHhcCCcCCCCceeEEEEEEEecCCcccCCCCCcceEEEEEeC---------CeEEEecCchhhccc
Confidence 389999999998761 122 22 389999997 5899999999987 478999876777788
Q ss_pred eecccCccEEEEeccccccCCeEEEEEecCCc-------CccceeEEEEEeecccccCC--EEEeccccccccccCCCcC
Q 001026 226 HYKQADCELVKIDIHCHIQGDVVLECISLDSD-------QEREEMMFRVMFNTAFIRSN--ILMLNRDEIDILWNSKDLF 296 (1184)
Q Consensus 226 ~~~~~d~~~i~i~~~~~v~GDV~i~~~h~~~~-------~~~~~~~Fr~~FnT~FI~~~--~L~l~k~eLD~~~~~~~~f 296 (1184)
.|.++++ .|+|++++.|+|||+|+|||++.. ...+++||||||||+||++| +|+|+|+|||.++ .+++|
T Consensus 234 ~~~~~~~-~i~i~~~~~l~GDV~v~~~h~~~~~g~~l~~k~~~~~mFr~~FhT~FI~~~~~~l~~~k~eLD~~~-~~~rf 311 (361)
T 3n0a_A 234 EYRVQDG-KIFIPLSITVQGDVVVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELDACD-VPEKY 311 (361)
T ss_dssp CEEGGGC-CEEEEEEEEECSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEGGGSCTTCCEEEEEGGGCBSCC-CGGGS
T ss_pred cccccCc-eEEeCCCCeEECCEEEEEEeCCCccccccccccccceEEEEEeeeeEeeCCceEEEeEhhhccccc-ccccC
Confidence 8988775 578999999999999999998642 23468999999999999987 8999999999854 57999
Q ss_pred CcccceEEEEeccccCCcCCcC-CCCCCccCCCCcHHHHHHHHHh
Q 001026 297 SKEFRAEVLFSEMDAATSLVSV-DLPGIEEKDGLPIEAFAKVQEI 340 (1184)
Q Consensus 297 p~dF~vel~F~~~~~~~~~~~~-~~~~~~~~~~~~~e~f~~~~~~ 340 (1184)
|+||+|||.|+........... --.+.+.|+..+...|+..+|.
T Consensus 312 p~~f~v~l~f~~~~~~r~~~~~~~w~~~~~~~~~~~~~fs~~~e~ 356 (361)
T 3n0a_A 312 PQLFQVTLDVELQPHDKVMELTPPWEHYCTKDVNPSILFSSHQEH 356 (361)
T ss_dssp CTTCEEEEEEEECSSCCCCSSCCGGGGCCCTTCCGGGGCSSHHHH
T ss_pred CCCeEEEEEEEecCCCCCCCCCCCcccCCccCCCchhhcCCHHHh
Confidence 9999999999886655433222 2345667777788888877774
No 2
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=100.00 E-value=2.4e-64 Score=575.93 Aligned_cols=288 Identities=14% Similarity=0.265 Sum_probs=242.5
Q ss_pred cchhhhhccC--------CCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcc
Q 001026 2 ALFRKFFYRK--------PPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQ 73 (1184)
Q Consensus 2 ~~~rr~~~~~--------~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~ 73 (1184)
+++|++|+++ .+|||+|||+||||| +||+++. |+.|||+|+||++||+++|++| |+|||||+|+.|+
T Consensus 5 ~~~r~~vs~~k~r~~~~~~~LDltyIT~riIam--~~P~~~~-e~~yRn~i~dv~~~L~~~h~~~-y~V~NL~sE~~Yd- 79 (339)
T 3v0d_A 5 ASSRRTISQNKRRYRKDGFDLDLTYVTDHVIAM--SFPSSGR-QSLFRNPIGEVSRFFKTKHPDK-FRIYNLCSERGYD- 79 (339)
T ss_dssp ---------CTTEEEETTEEEEEEEEETTEEEE--CCEESSS-CCTTSEEHHHHHHHHHHHSTTC-EEEEEEETTCCCC-
T ss_pred HHHHHHhcccceeeccCCCceeEEEEecCEEEE--ECCCCCc-hhhccCCHHHHHHHHHHhCCCc-eEEEECCCCCCCC-
Confidence 4688888844 459999999999999 5999986 9999999999999999999995 9999998777665
Q ss_pred cccccccCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHH
Q 001026 74 IGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQK 153 (1184)
Q Consensus 74 ~~~~~~~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~ 153 (1184)
.++|+++|.+||+ .|+.+|+++.|++||+.|++||+++++|+|+|||++|+|| ||+|+||||+|++.+.++++
T Consensus 80 ----~~~f~~~v~~~p~--pD~~~P~~~~l~~~~~~v~~~l~~~~~~~v~vHC~~G~gR-tg~~ia~~Li~~~~~~~~~~ 152 (339)
T 3v0d_A 80 ----ETKFDNHVYRVMI--DDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGR-TGTLVSSWLLEDGKFDTAKE 152 (339)
T ss_dssp ----GGGGTTCEEEEEE--CTTSCCCHHHHHHHHHHHHHHHHTCTTCEEEEECSSSSHH-HHHHHHHHHHHTTSCSSHHH
T ss_pred ----hHHcCCeEEEecc--CCCCCCCHHHHHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hHHHHHHHHHHhcCCCCHHH
Confidence 4789999999965 4666789999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHHHh----------------hhchhhhhcccCCCC-----C----CCCC-----ccccCCcCCCCCceeEEEEEecCC
Q 001026 154 TLDMIY----------------KQAPRELLQLMSPLN-----P----LPSQ-----LRVIPNFDGEGGCCPIFRIYGQDP 203 (1184)
Q Consensus 154 aL~~~~----------------~pSq~ryl~yfs~Ln-----~----~Psq-----lr~VP~f~~~~gcrP~l~Iy~~~~ 203 (1184)
||++|. .|||+|||+||..+. . .+.. |+.||.|++.+||||+++||++
T Consensus 153 Al~~~~~~R~~~~~~~~~~~v~~psQ~Ryv~yf~~~l~~~~~~~p~~~~l~L~~i~l~~iP~f~~~~Gcrp~~~Iy~~-- 230 (339)
T 3v0d_A 153 ALEYFGSRRTDFEVGDVFQGVETASQIRYVGYFEKIKKNYGGQLPPMKKLKVTGVTITAIQGVGRGNGSDLSMQIVSE-- 230 (339)
T ss_dssp HHHHHHHHHSSCCTTSCCCCC-CHHHHHHHHHHHHHHHHSTTSCCCCCCEEEEEEEEECCTTSTTSSSTTEEEEEEET--
T ss_pred HHHHHHHhcCCccccccccccCCHHHHHHHHHHHHHHhhcCccCCCCceEEEEEEEEeCCCccCCCCCcceeEEEEeC--
Confidence 999983 389999999998751 1 1222 3899999999999999999997
Q ss_pred CcccCCCCcEEEeCc-cCccceeeecccCccEEEEecc--ccccCCeEEEEEecCCcC--ccceeEEEEEeecccccCCE
Q 001026 204 LMVADRTPKVLFSTP-KRSKLVRHYKQADCELVKIDIH--CHIQGDVVLECISLDSDQ--EREEMMFRVMFNTAFIRSNI 278 (1184)
Q Consensus 204 ~~~~~~~~~~lfss~-~~~~~~~~~~~~d~~~i~i~~~--~~v~GDV~i~~~h~~~~~--~~~~~~Fr~~FnT~FI~~~~ 278 (1184)
.++||++. ...+.++.+.+.+++.|.|+++ +.|+|||+|+|||++.+. ..+++||||||||+||++|+
T Consensus 231 -------~~~v~~s~~~~~~~~~~~~~~~~~~i~i~l~~~~~l~GDV~v~~~h~~~~l~~~~~~~~F~~~FhT~fI~~~~ 303 (339)
T 3v0d_A 231 -------RQEVLLCKFAEGYNCALQYDATDDCVTCEVKNCPVLAGDIKVRFMSTSKSLPRGYDNCPFYFWFNTSLVEGDH 303 (339)
T ss_dssp -------TEEEEEEETTTTBTEEEEEETTTTEEEEEECSCCCBCSEEEEEEEECCTTSCCCGGGSSEEEEEEGGGCCTTE
T ss_pred -------CeEEEEecCCCccceeEEeecCCCeEEEEeCCCCeEeCCEEEEEEEccccccccccceEEEEEEEceEeECCE
Confidence 47899884 2344566665555567888874 889999999999997544 34689999999999999999
Q ss_pred EEeccccccccccCC--CcCCcccceEEEEeccc
Q 001026 279 LMLNRDEIDILWNSK--DLFSKEFRAEVLFSEMD 310 (1184)
Q Consensus 279 L~l~k~eLD~~~~~~--~~fp~dF~vel~F~~~~ 310 (1184)
|+|+|+|||.+|+++ ++|++||+|||+|++.+
T Consensus 304 l~l~k~eLD~~~k~k~~~~f~~dF~Vel~F~~~~ 337 (339)
T 3v0d_A 304 VTLKREEIDNPHKKKTWKIYRDNFTVKLTFSDAE 337 (339)
T ss_dssp EEEEGGGSBTTTSGGGTTTSCTTCEEEEEEEECC
T ss_pred EEEEhhHccccccccccccCCCCeEEEEEEeccc
Confidence 999999999999865 79999999999999954
No 3
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1
Probab=100.00 E-value=2.2e-53 Score=486.25 Aligned_cols=279 Identities=22% Similarity=0.406 Sum_probs=237.6
Q ss_pred hhhhccCCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCce
Q 001026 5 RKFFYRKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMT 84 (1184)
Q Consensus 5 rr~~~~~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~ 84 (1184)
|||...+.+|||+|||+|||||+ ||++++ |..|||+|++|+.||+++|+++ |+|||||+++.|+ ...|+++
T Consensus 8 ~r~~~~~~~ldl~~It~~li~~~--~P~~~~-e~l~r~~i~~Vv~~l~~~~~~~-~~v~nl~~e~~y~-----~~~~~~~ 78 (324)
T 1d5r_A 8 RRYQEDGFDLDLTYIYPNIIAMG--FPAERL-EGVYRNNIDDVVRFLDSKHKNH-YKIYNLCAERHYD-----TAKFNCR 78 (324)
T ss_dssp CCCCBTTTTBSEEEEETTEEEEC--CCBSSC-CTTCCCBHHHHHHHHHHHSSSC-EEEEEEESSCCCC-----TTSCSSC
T ss_pred chhhcCCcccceEEEcCcEEEEe--CCCCcc-hhhhccCHHHHHHHHHhcCCCc-EEEEEcCCCCCCC-----hHHhCCe
Confidence 67777889999999999999995 999877 8999999999999999999995 9999998776554 3678899
Q ss_pred EEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh-----
Q 001026 85 VMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY----- 159 (1184)
Q Consensus 85 V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~----- 159 (1184)
+.+|+ |.|+.+|+++.|.+||+.+++||.++++|+|+|||++|+|| ||||+||||++.+.+.+.++|+++|.
T Consensus 79 ~~~~~--~~D~~~P~~~~l~~~~~~i~~~l~~~~~~~VlVHC~aG~gR-TGt~ia~yL~~~~~~~~~~eal~~~~~~R~~ 155 (324)
T 1d5r_A 79 VAQYP--FEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGR-TGVMICAYLLHRGKFLKAQEALDFYGEVRTR 155 (324)
T ss_dssp EEEEE--ECTTSCCCHHHHHHHHHHHHHHHTTTSCSEEEEECSSSSHH-HHHHHHHHHHHHTSCSSHHHHHHHHHHHHCS
T ss_pred EEEEe--ecCCCCCcHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCh-hHHHHHHHHHHhcCCCCHHHHHHHHHHhhcc
Confidence 99996 45666789999999999999999998899999999999999 99999999999999878899999873
Q ss_pred ------hhchhhhhcccCCC-------CCCCCC-----ccccCCcCCCCCceeEEEEEecCCCcccCCCCcEEEeCccCc
Q 001026 160 ------KQAPRELLQLMSPL-------NPLPSQ-----LRVIPNFDGEGGCCPIFRIYGQDPLMVADRTPKVLFSTPKRS 221 (1184)
Q Consensus 160 ------~pSq~ryl~yfs~L-------n~~Psq-----lr~VP~f~~~~gcrP~l~Iy~~~~~~~~~~~~~~lfss~~~~ 221 (1184)
.++|.|||+||..+ ++.+.. |+.||.|+ .+||+|+++||++ ..+||++....
T Consensus 156 r~~~v~~~~Q~~yl~~~~~~l~~~~~~~~~~l~l~~i~l~~ip~~~-~~~~~p~~~i~~~---------~~~~~~s~~~~ 225 (324)
T 1d5r_A 156 DKKGVTIPSQRRYVYYYSYLLKNHLDYRPVALLFHKMMFETIPMFS-GGTCNPQFVVCQL---------KVKIYSSNSGP 225 (324)
T ss_dssp SSCSSCSHHHHHHHHHHHHHHHHTCCCCCCEEEEEEEEESSCCCSB-TTBCCEEEEEEET---------TEEEEECCSSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHhcCCCCCCcceEEEEEEEeCCCccc-CCCcceEEEEEeC---------CeeEEeCCccc
Confidence 35899999999764 222222 37899999 6899999999997 36799987543
Q ss_pred cceeeecccCccEEEEec--cccccCCeEEEEEecCCcCccceeEEEEEeecccccCC----------EEEecccccccc
Q 001026 222 KLVRHYKQADCELVKIDI--HCHIQGDVVLECISLDSDQEREEMMFRVMFNTAFIRSN----------ILMLNRDEIDIL 289 (1184)
Q Consensus 222 ~~~~~~~~~d~~~i~i~~--~~~v~GDV~i~~~h~~~~~~~~~~~Fr~~FnT~FI~~~----------~L~l~k~eLD~~ 289 (1184)
. ..+++.++|++ ++.|+|||+|+|||.+.....+++||||||||+||+++ +|+|+|+|||.+
T Consensus 226 ~------~~~~~~~~~~~~~~~~l~GDv~i~~~~~~~~~~~~~~~f~~~FnT~fi~~~~~~~~~~~~~~l~~~k~elD~~ 299 (324)
T 1d5r_A 226 T------RREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEEVDNDKEYLVLTLTKNDLDKA 299 (324)
T ss_dssp S------EEETTEEEEEEEEEEEEESEEEEEEEECCTTCSSCEEEEEEEEEGGGCC--------CCSEEEEEEGGGSTTG
T ss_pred c------cCCCceEEEEeCCCceeeCCEEEEEEeCCCCccCCcEEEEEEEEhhhccCcccccCCCccEEEEecHHHcCCC
Confidence 1 12335677777 45899999999999986666788999999999999753 799999999999
Q ss_pred ccCC--CcCCcccceEEEEecccc
Q 001026 290 WNSK--DLFSKEFRAEVLFSEMDA 311 (1184)
Q Consensus 290 ~~~~--~~fp~dF~vel~F~~~~~ 311 (1184)
|+++ ++|++||+|||+|+++++
T Consensus 300 ~~~k~~~~f~~~f~v~l~f~~~~~ 323 (324)
T 1d5r_A 300 NKDKANRYFSPNFKVKLYFTKTVE 323 (324)
T ss_dssp GGCTTCSSSCTTCEEEEEEEECC-
T ss_pred ccccccccCCCCeEEEEEEecCCC
Confidence 9865 799999999999999865
No 4
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=100.00 E-value=3.3e-43 Score=404.37 Aligned_cols=240 Identities=27% Similarity=0.462 Sum_probs=196.9
Q ss_pred cccccccccccccccceeeccccCCcchhH-----------------------------------------------HHH
Q 001026 925 MRGLAHIELRRANNCEIMLTKVKIPLPDLM-----------------------------------------------FFL 957 (1184)
Q Consensus 925 ~r~V~lLd~kRa~nl~I~L~klK~s~~ei~-----------------------------------------------Fll 957 (1184)
...+.|||.+|++|++|+|++++++.+||+ ||+
T Consensus 6 ~~~i~vLD~kraqNi~I~L~~~k~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~EqF~~ 85 (340)
T 1v9d_A 6 VKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGV 85 (340)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHHHHHHH
T ss_pred CCeeeecCHHHHhHHHHHHhhcCCCHHHHHHHHHhCCcccCCHHHHHHHHccCCCHHHHHHHHHhhCChhhcCHHHHHHH
Confidence 356899999999999999999999988886 999
Q ss_pred HhcCCCchhhhhhhhhhccchHHH-----------------HHcchhHHHHHHHHHHHhhhhcCCCCCcceeeeeccchh
Q 001026 958 ELMKVPRVESKLRVFSFKIQFQTQ-----------------VRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLL 1020 (1184)
Q Consensus 958 ~L~~IPrl~~RL~~l~fk~~F~~~-----------------L~~S~~L~~lL~~IL~iGN~LN~gt~rG~A~GFkL~SL~ 1020 (1184)
+|++||+++.||++|+|+.+|.+. |++|++|+.||++||++|||||+|+.+|+|+||+|++|.
T Consensus 86 ~l~~ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~ 165 (340)
T 1v9d_A 86 VMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLC 165 (340)
T ss_dssp HHHTSTTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------CCHH
T ss_pred HHHCCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHcCcCCCCCCCCceeeeehHHHH
Confidence 999999999999999999999986 999999999999999999999999999999999999999
Q ss_pred chhcccccCCcchHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchh
Q 001026 1021 KLTDTRARNNKMTLMHYLCK------------------------IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGN 1076 (1184)
Q Consensus 1021 KL~dtKs~d~k~TLLhflvk------------------------i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~ 1076 (1184)
||.|||++|+++|||||||+ +++..|..++..+.+++..++.++.......+..|.
T Consensus 166 KL~d~Ks~d~k~TLLh~lv~~~~~~~p~l~~f~~eL~~v~~Askvs~~~l~~~l~~l~~~~~~~~~~l~~~~~~~~~~d~ 245 (340)
T 1v9d_A 166 KLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDK 245 (340)
T ss_dssp HHHHSBCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSSSCC
T ss_pred hhhhhcCCCCCccHHHHHHHHHHHhCchhccchhHHHhHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcccccchhHH
Confidence 99999999999999999998 456788899999999999999999876554455689
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1077 FCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLEFERKKAEK 1156 (1184)
Q Consensus 1077 f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~e~ekkk~ek 1156 (1184)
|.++|..|+..|+.++..|+..++++++.|++++.|||||++++++++||++|.+|+..|++|+++|.+++++|+++++.
T Consensus 246 f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~fF~~~~~F~~~f~~a~~en~~r~e~eek~~~~ 325 (340)
T 1v9d_A 246 FVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRA 325 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888766555
Q ss_pred HHHHHHHH
Q 001026 1157 AVENEKLK 1164 (1184)
Q Consensus 1157 eaekek~k 1164 (1184)
++++++.+
T Consensus 326 ~~~~e~~~ 333 (340)
T 1v9d_A 326 KLAKEKAE 333 (340)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54444433
No 5
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=100.00 E-value=2.6e-42 Score=409.33 Aligned_cols=232 Identities=27% Similarity=0.465 Sum_probs=216.2
Q ss_pred cccccccccccccccceeeccccCCcchhH-----------------------------------------------HHH
Q 001026 925 MRGLAHIELRRANNCEIMLTKVKIPLPDLM-----------------------------------------------FFL 957 (1184)
Q Consensus 925 ~r~V~lLd~kRa~nl~I~L~klK~s~~ei~-----------------------------------------------Fll 957 (1184)
...|.|||.+|++||+|+|++++++++||+ ||+
T Consensus 77 ~~~v~lLD~kraqNi~I~L~~lk~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~d~~~L~~~EqF~~ 156 (457)
T 3obv_E 77 VKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGV 156 (457)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHCCCHHHHHHHHTTTTSGGGSCHHHHHHH
T ss_pred CceeEecCHHHHhHHHHHHhccCCCHHHHHHHHHhCCcccCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHHHH
Confidence 356899999999999999999999988886 999
Q ss_pred HhcCCCchhhhhhhhhhccchHHH-----------------HHcchhHHHHHHHHHHHhhhhcCCCCCcceeeeeccchh
Q 001026 958 ELMKVPRVESKLRVFSFKIQFQTQ-----------------VRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLL 1020 (1184)
Q Consensus 958 ~L~~IPrl~~RL~~l~fk~~F~~~-----------------L~~S~~L~~lL~~IL~iGN~LN~gt~rG~A~GFkL~SL~ 1020 (1184)
+|++||+++.||++|+|+.+|.+. |++|+.|+.||++||++|||||+|+.+|+|+||+|++|.
T Consensus 157 ~l~~Ip~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g~~~g~A~GFkL~sL~ 236 (457)
T 3obv_E 157 VMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLC 236 (457)
T ss_dssp HHTSSTTHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTTSTTCSCSCBCGGGHH
T ss_pred HHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhhccCCcCCCeeeEehHHHH
Confidence 999999999999999999999986 899999999999999999999999999999999999999
Q ss_pred chhcccccCCcchHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchh
Q 001026 1021 KLTDTRARNNKMTLMHYLCK------------------------IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGN 1076 (1184)
Q Consensus 1021 KL~dtKs~d~k~TLLhflvk------------------------i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~ 1076 (1184)
||.|||++|+++|||||||+ ++++.|..++.+|.++|..++++++......+..|.
T Consensus 237 KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakvs~~~l~~dl~~L~~~l~~v~~~l~~~~~~~~~~d~ 316 (457)
T 3obv_E 237 KLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDK 316 (457)
T ss_dssp HHTTCBCSSTTCBHHHHHHHHHHHHCGGGGGHHHHCTTHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHSCCCCSSTTCC
T ss_pred HHHhhhcCCCCccHHHHHHHHHHHcCccccCChhhhhhHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHH
Confidence 99999999999999999998 456788899999999999999999876544445689
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1077 FCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLEFERKKAEK 1156 (1184)
Q Consensus 1077 f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~e~ekkk~ek 1156 (1184)
|..+|..|+..|+.++..|+..+.++++.|.+++.|||||++++++++||++|.+|+..|++|++||.+++++|++.++.
T Consensus 317 f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~l~~yFgedp~~~~~~eFF~~~~~F~~~fkkA~~eN~~r~e~eek~~r~ 396 (457)
T 3obv_E 317 FVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRA 396 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998887765443
No 6
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=100.00 E-value=5.4e-40 Score=393.45 Aligned_cols=233 Identities=27% Similarity=0.492 Sum_probs=210.5
Q ss_pred ccccccccccccccccceeeccccCCcchhH------------------------------------------------H
Q 001026 924 KMRGLAHIELRRANNCEIMLTKVKIPLPDLM------------------------------------------------F 955 (1184)
Q Consensus 924 ~~r~V~lLd~kRa~nl~I~L~klK~s~~ei~------------------------------------------------F 955 (1184)
+...+.|||.+|++||+|+|++++++.+||+ |
T Consensus 86 k~~~v~lLD~kRaqNi~I~L~~lk~~~~ei~~aIl~~D~~~~L~~e~l~~Ll~~~Pt~eE~~~l~~~~~d~~~L~~aEqF 165 (483)
T 2j1d_G 86 KVKELSVIDGRRAQNCNILLSRLKLSNDEIKRAILTMDEQEDLPKDMLEQLLKFVPEKSDIDLLEEHKHELDRMAKADRF 165 (483)
T ss_dssp --CCBCCSCHHHHHHHHHHHHHHCCCHHHHHHHHHTTSTTCCCCHHHHHHHHHSCCCHHHHHHHHTTTTCGGGBCHHHHH
T ss_pred CCCcceeCCHHHHHHHHHHHhcCCCCHHHHHHHHHccCccccCCHHHHHHHHHhCCCHHHHHHHHHhccChhhcCHHHHH
Confidence 3456899999999999999999998877665 9
Q ss_pred HHHhcCCCchhhhhhhhhhccchHHH-----------------HHcchhHHHHHHHHHHHhhhhcCCCCCcceeeeeccc
Q 001026 956 FLELMKVPRVESKLRVFSFKIQFQTQ-----------------VRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDS 1018 (1184)
Q Consensus 956 ll~L~~IPrl~~RL~~l~fk~~F~~~-----------------L~~S~~L~~lL~~IL~iGN~LN~gt~rG~A~GFkL~S 1018 (1184)
|++|++||++..||++|+|+.+|.+. |++|+.|+.||++||++|||||+| .||+|+||+|++
T Consensus 166 l~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~IL~~GN~mN~g-~rg~A~GFkL~s 244 (483)
T 2j1d_G 166 LFEMSRINHYQQRLQSLYFKKKFAERVAEVKPKVEAIRSGSEEVFRSGALKQLLEVVLAFGNYMNKG-QRGNAYGFKISS 244 (483)
T ss_dssp HHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCS-SSCCCSCCCGGG
T ss_pred HHHHhCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhhhccC-CCCCceeeehHH
Confidence 99999999999999999999999976 999999999999999999999999 899999999999
Q ss_pred hhchhccccc-CCcchHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhccC-Cc
Q 001026 1019 LLKLTDTRAR-NNKMTLMHYLCK------------------------IQLKFLAEEMQAISKGLEKVVQELTASEND-GE 1072 (1184)
Q Consensus 1019 L~KL~dtKs~-d~k~TLLhflvk------------------------i~L~~L~~El~~l~k~L~kv~~el~~s~~d-~~ 1072 (1184)
|.||.|||++ |+++|||||||+ +++..|..+|.+|.++|..++++++....+ ..
T Consensus 245 L~KL~d~Ks~~d~k~TLLhylv~~v~~~~p~l~~f~~eL~~v~~Askv~~~~l~~~~~~L~~~l~~v~~~l~~~~~~~~~ 324 (483)
T 2j1d_G 245 LNKIADTKSSIDKNITLLHYLITIVENKYPSVLNLNEELRDIPQAAKVNMTELDKEISTLRSGLKAVETELEYQKSQPPQ 324 (483)
T ss_dssp GGGGGGSBCSSCTTCBHHHHHHHHHHHHCGGGGGHHHHTTTHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHhhhhcccCCCCCccHHHHHHHHHHHhCchhhchHHHHhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 9999999995 999999999999 356778899999999999999999887543 34
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Q 001026 1073 VSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCR---QLEF 1149 (1184)
Q Consensus 1073 ~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k---~~e~ 1149 (1184)
..|.|...|..|+..|+.++..|+..+.++.+.|.+++.|||||+++++.++||++|.+|+..|++|+++|.+ ++++
T Consensus 325 ~~d~f~~~m~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~~~fF~~~~~F~~~f~~A~~en~~~~~~~e~ 404 (483)
T 2j1d_G 325 PGDKFVSVVSQFITVASFSFSDVEDLLAEAKDLFTKAVKHFGEEAGKIQPDEFFGIFDQFLQAVSEAKQENENMRKKKEE 404 (483)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999999999999999999999999999999976 4444
Q ss_pred HHHHHHHH
Q 001026 1150 ERKKAEKA 1157 (1184)
Q Consensus 1150 ekkk~eke 1157 (1184)
|++|++++
T Consensus 405 eekr~~~e 412 (483)
T 2j1d_G 405 EERRARME 412 (483)
T ss_dssp THHHHHHH
T ss_pred HHHHHHHH
Confidence 55554433
No 7
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=100.00 E-value=7.1e-39 Score=374.90 Aligned_cols=223 Identities=30% Similarity=0.493 Sum_probs=201.2
Q ss_pred ccccccccccccccceeeccccCCcchhH--------------------------------------------------H
Q 001026 926 RGLAHIELRRANNCEIMLTKVKIPLPDLM--------------------------------------------------F 955 (1184)
Q Consensus 926 r~V~lLd~kRa~nl~I~L~klK~s~~ei~--------------------------------------------------F 955 (1184)
..|.|||.+|++|++|+|++++++.+||+ |
T Consensus 82 ~~v~lLd~kra~Ni~I~L~~l~~~~~ei~~aI~~~D~~~L~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~~~~L~~~EqF 161 (402)
T 4eah_A 82 SKVTLLEANRAKNLAITLRKAGRSAEEICRAIHTFDLQTLPVDFVECLMRFLPTEAEVKLLRQYERERQPLEELAAEDRF 161 (402)
T ss_dssp -CBCSSCHHHHHHHHHHHHHHCCCHHHHHHHHHTTSCSCCCHHHHHHHHHTCCCHHHHHHHHHHHHSSCCTTTBCHHHHH
T ss_pred CceeeCCHHHHHHHHHHHhcCCCCHHHHHHHHHcCCcccCCHHHHHHHHhcCCCHHHHHHHHHhhccCCchhhccHHHHH
Confidence 46899999999999999999999988886 9
Q ss_pred HHHhcCCCchhhhhhhhhhccchHHH-----------------HHcchhHHHHHHHHHHHhhhhcCCCCCcceeeeeccc
Q 001026 956 FLELMKVPRVESKLRVFSFKIQFQTQ-----------------VRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDS 1018 (1184)
Q Consensus 956 ll~L~~IPrl~~RL~~l~fk~~F~~~-----------------L~~S~~L~~lL~~IL~iGN~LN~gt~rG~A~GFkL~S 1018 (1184)
|++|++||+++.||++|+|+.+|.+. |++|++|+.||++||++|||||+| .||+|+||+|++
T Consensus 162 ~~~l~~ip~~~~Rl~~l~f~~~f~~~~~~l~~~l~~v~~A~~~l~~S~~l~~lL~~iL~~GN~mN~g-~rg~A~GFkL~s 240 (402)
T 4eah_A 162 MLLFSKVERLTQRMAGMAFLGNFQDNLQMLTPQLNAIIAASASVKSSQKLKQMLEIILALGNYMNSS-KRGAVYGFKLQS 240 (402)
T ss_dssp HHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCS-SSCCCSCBCGGG
T ss_pred HHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhhccCC-CCCccceeeHHH
Confidence 99999999999999999999999986 899999999999999999999998 799999999999
Q ss_pred hhchhcccccCCcchHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccc
Q 001026 1019 LLKLTDTRARNNKMTLMHYLCK------------------------IQLKFLAEEMQAISKGLEKVVQELTASENDGEVS 1074 (1184)
Q Consensus 1019 L~KL~dtKs~d~k~TLLhflvk------------------------i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~ 1074 (1184)
|.||.|||++|+++|||||||+ ++++.|..++++|.++++.+++++....
T Consensus 241 L~KL~d~Ks~d~k~TLLh~l~~~~~~~~p~l~~f~~eL~~v~~Aa~v~~~~l~~d~~~L~~~l~~~~~e~~~~d------ 314 (402)
T 4eah_A 241 LDLLLDTKSTDRKMTLLHFIALTVKEKYPELANFWQELHFVEKAAAVSLENVLLDVKELGRGMELIRRECSIHD------ 314 (402)
T ss_dssp GGSSSSSBCTTSSSBHHHHHHHHHHHHCGGGGTCSTTCCSHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTTC------
T ss_pred HHHHHhccCCCCCccHHHHHHHHHHhhhHHHHHHhhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhcccc------
Confidence 9999999999999999999999 4678899999999999999998886532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLEFERKKA 1154 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~e~ekkk~ 1154 (1184)
...|+.|++.|+.+++.|+..++++++.|.+++.|||||+++++.++||++|.+|+..|++|++||.+|+++|+..+
T Consensus 315 ---~~~l~~Fl~~a~~~~~~L~~~~~~~~~~~~~l~~yFgedpk~~~~~~fF~~~~~F~~~fk~A~~en~~r~~~e~~~~ 391 (402)
T 4eah_A 315 ---NSVLRNFLSTNEGKLDKLQRDAKTAEEAYNAVVRYFGESPKTTPPSVFFPVFVRFIRSYKEAEQENEARKKQEEVMR 391 (402)
T ss_dssp ---CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 13789999999999999999999999999999999999999999999999999999999999999998888777666
Q ss_pred HHHH
Q 001026 1155 EKAV 1158 (1184)
Q Consensus 1155 ekea 1158 (1184)
|+..
T Consensus 392 ~~~~ 395 (402)
T 4eah_A 392 EKQL 395 (402)
T ss_dssp ----
T ss_pred hhhc
Confidence 5543
No 8
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=100.00 E-value=7e-37 Score=360.54 Aligned_cols=198 Identities=20% Similarity=0.298 Sum_probs=178.0
Q ss_pred HHHHhc-CC-CchhhhhhhhhhccchHHH-----------------HHcchhHHHHHHHHHHHhhhhcCCCCCcceeeee
Q 001026 955 FFLELM-KV-PRVESKLRVFSFKIQFQTQ-----------------VRNSIKLKRIMQTILSLGNALNHGTARGSAVGFR 1015 (1184)
Q Consensus 955 Fll~L~-~I-Prl~~RL~~l~fk~~F~~~-----------------L~~S~~L~~lL~~IL~iGN~LN~gt~rG~A~GFk 1015 (1184)
||++|+ .| ++++.||++|+|+.+|.+. |++|++|++||++||++|||||+|+. +|+||+
T Consensus 164 f~~~l~~~i~~~~~~Rl~~~~f~~~f~~~~~~l~~~l~~l~~A~~el~~S~~l~~lL~~iL~~GN~mN~g~~--~A~GFk 241 (411)
T 1ux5_A 164 IYLQLMVNLESYWGSRMRALTVVTSYEREYNELLAKLRKVDKAVSALQESDNLRNVFNVILAVGNFMNDTSK--QAQGFK 241 (411)
T ss_dssp HHHHTTTTTTTTHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSCGGG--CCSCCC
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhCcccCCCC--CeeEee
Confidence 888876 68 5789999999999999986 99999999999999999999999975 799999
Q ss_pred ccchhchhcccccCCcchHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhhccC-
Q 001026 1016 LDSLLKLTDTRARNNKMTLMHYLCK------------------------IQLKFLAEEMQAISKGLEKVVQELTASEND- 1070 (1184)
Q Consensus 1016 L~SL~KL~dtKs~d~k~TLLhflvk------------------------i~L~~L~~El~~l~k~L~kv~~el~~s~~d- 1070 (1184)
|++|.||.|||++|+++|||||||+ ++++.|..+++++.++|.+++++++.....
T Consensus 242 L~sL~KL~d~Ks~d~k~TLLh~l~~~v~~~~p~l~~f~~eL~~v~~Aakv~~~~l~~d~~~L~~~l~~v~~~l~~~~~s~ 321 (411)
T 1ux5_A 242 LSTLQRLTFIKDTTNSMTFLNYVEKIVRLNYPSFNDFLSELEPVLDVVKVSIEQLVNDCKDFSQSIVNVERSVEIGNLSD 321 (411)
T ss_dssp GGGGGGSSSCBCTTSCSBHHHHHHHHHHHHCGGGGGHHHHTHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHSTTTC
T ss_pred hhHHHHHHHhhCCCCCccHHHHHHHHHHHhCcccccccchhhhHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 9999999999999999999999999 356778899999999999999999753211
Q ss_pred ---CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1071 ---GEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPA-RCPFEQVVSTLLNFVKMFVLAHEENCRQ 1146 (1184)
Q Consensus 1071 ---~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~-~~~~e~ff~~l~~F~~~fk~a~ee~~k~ 1146 (1184)
....+.|.+.|..|+..|+.++..|++.++++++.|++++.|||||++ +++.++||++|.+|+..|++|+++|.++
T Consensus 322 ~~~~~~~d~f~~~~~~fl~~a~~~~~~l~~~~~~~~~~~~~l~~yfged~~~~~~~~~fF~~~~~F~~~f~~a~~en~~~ 401 (411)
T 1ux5_A 322 SSKFHPLDKVLIKTLPVLPEARKKGDLLEDEVKLTIMEFESLMHTYGEDSGDKFAKISFFKKFADFINEYKKAQAQNLAA 401 (411)
T ss_dssp TTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123578999999999999999999999999999999999999999998 4678999999999999999999999987
Q ss_pred HHHHHHHH
Q 001026 1147 LEFERKKA 1154 (1184)
Q Consensus 1147 ~e~ekkk~ 1154 (1184)
+|++++++
T Consensus 402 ~e~~~~~e 409 (411)
T 1ux5_A 402 EEEERLYI 409 (411)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 77665544
No 9
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=99.65 E-value=2.9e-16 Score=172.10 Aligned_cols=135 Identities=12% Similarity=0.170 Sum_probs=105.3
Q ss_pred eeeeCcEEEecCCCCCCc-c---hhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCC-cCcccccccccCCceEEecCCC
Q 001026 17 LEISERVFVFDCCFTTDI-L---EEEEYKEYLGGIVGQLREYFPEASFMVFNFREGE-HQSQIGQVLSEYDMTVMDYPRH 91 (1184)
Q Consensus 17 tyIT~RIiams~gfPa~~-~---~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~-~~~~~~~~~~~f~~~V~~~P~~ 91 (1184)
.+|+.|||||. +|.+. + .+..||+.+++|++||+.+|.+. +.|+|||.+. +|+. +.+...+.++.++|+.
T Consensus 40 ~~I~~rfia~~--~P~~~~~~~~v~~~~r~~~~~v~~~l~~~~~~i-~~VInL~~e~~~y~~--~~~~~~gi~y~~~p~~ 114 (241)
T 2c46_A 40 QPVAGRFLPLK--TMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKM-GLLVDLTNTSRFYDR--NDIEKEGIKYIKLQCK 114 (241)
T ss_dssp CCBTTTEEEEC--CCCCGGGGGGSCGGGCCCHHHHHHHHHHHTCEE-EEEEECSSCSCSSCT--HHHHTTTCEEEECCCC
T ss_pred CEeCCcEEEec--CCcccchhhhccHhhcCCHHHHHHHHHHhCCCc-ceeeeccCCCCCCCH--HHHHHCCCEEEEEecC
Confidence 58999999995 88752 1 25678999999999999999985 9999999764 3321 1123356688899875
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 92 YEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 92 ~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
++| .+|..+.|..||+.|++|+.++.++.|+|||++|.|| ||+||||||++...+ +.++|+++|.
T Consensus 115 D~~-~~P~~~~l~~~~~~i~~~~~~~~~~~VlVHC~aG~gR-TGt~ia~yLm~~~~~-s~~eAi~~vr 179 (241)
T 2c46_A 115 GHG-ECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNR-TGFLICAFLVEKMDW-SIEAAVATFA 179 (241)
T ss_dssp CTT-CCCCHHHHHHHHHHHTTC-----CEEEEEECSSSSHH-HHHHHHHHHHHTTCC-CHHHHHHHHH
T ss_pred CCC-CCCChHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH-HHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 443 3589999999999999999988889999999999999 999999999996554 6788999884
No 10
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=99.56 E-value=1.2e-14 Score=150.39 Aligned_cols=130 Identities=12% Similarity=0.128 Sum_probs=97.7
Q ss_pred eeC-cEEEecCCCCCCcchhHHhh---ccHHHHHHHHhhhCCCCcEEEEEeccCC-cCcccccccccCCceEEecCCCCC
Q 001026 19 ISE-RVFVFDCCFTTDILEEEEYK---EYLGGIVGQLREYFPEASFMVFNFREGE-HQSQIGQVLSEYDMTVMDYPRHYE 93 (1184)
Q Consensus 19 IT~-RIiams~gfPa~~~~e~~YR---N~i~dV~~fL~~~H~~~~y~V~Nl~ee~-~~~~~~~~~~~f~~~V~~~P~~~~ 93 (1184)
|.+ |||||+ +|.+.. -..|. +...++..||+. |.+. +.|+||+++. +|+. +.+...+.++.++|+.
T Consensus 17 i~~~~~i~~~--~P~~~~-~~~~~~~~~~~~~~~~ll~~-~~gi-~~Vi~l~~~~~~~~~--~~~~~~gi~~~~~~~~-- 87 (169)
T 1yn9_A 17 IKDSNLICFK--TPLRPE-LFAYVTSEEDVWTAEQIVKQ-NPSI-GAIIDLTNTSKYYDG--VHFLRAGLLYKKIQVP-- 87 (169)
T ss_dssp CTTSSEEEEC--CCCCGG-GGTTBCCGGGCCCHHHHHHH-CTTE-EEEEECCSCSCSCCT--HHHHHTTCEEEECCCC--
T ss_pred cCCCeeEEec--CcchHh-HhhcCCCcccCCCHHHHHhh-CCCc-CEEEEcCCCCCCCCH--HHHHhcCCEEEEEeCC--
Confidence 555 899995 897633 12343 445668888887 6664 9999999754 3321 1112235667888654
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 94 GCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 94 ~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
|+..|..+.+..|++.+++|+.++.++.|+|||.+|+|| ||+++||||++...+ +.++|+++|.
T Consensus 88 d~~~p~~~~~~~~~~~~~~~~~~~~~~~vlVHC~aG~~R-Tg~~va~~L~~~~~~-~~~~a~~~~r 151 (169)
T 1yn9_A 88 GQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINR-TGYMVCRYLMHTLGI-APQEAIDRFE 151 (169)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHHHSTTSEEEEECSSSSHH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCCCCCh-HHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 445678899999999999999988889999999999999 999999999995444 7788999884
No 11
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=99.51 E-value=7.4e-14 Score=147.23 Aligned_cols=140 Identities=15% Similarity=0.183 Sum_probs=107.9
Q ss_pred cCCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecC
Q 001026 10 RKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYP 89 (1184)
Q Consensus 10 ~~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P 89 (1184)
.-.++||+|++.|+|++. +|.+ +.+.+-.++|.+. + --.|+|||++.|+.. .+...+.++.++|
T Consensus 26 ~p~~~~~~~~~~r~I~tq--~P~~--------~t~~~~~~~L~~~-g--i~~Iv~l~~~~~~~~---~~~~~~i~~~~~p 89 (189)
T 3rz2_A 26 RPAPVEVTYKNMRFLITH--NPTN--------ATLNKFIEELKKY-G--VTTIVRVCEATYDTT---LVEKEGIHVLDWP 89 (189)
T ss_dssp ---CCCEEETTEEEEEEC--CCCT--------TTHHHHHHHHHTT-T--EEEEEECSCCCSCCH---HHHHSSCEEEECC
T ss_pred CCCCeeeecCCCeEEEeC--CCCc--------ccHHHHHHHHHHc-C--CcEEEEeCCCcCCHH---HHHHcCcEEEEec
Confidence 345689999999999996 7874 5567777777654 2 268999998876432 1334567888998
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhh-------hc
Q 001026 90 RHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYK-------QA 162 (1184)
Q Consensus 90 ~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~-------pS 162 (1184)
+++ ..++..+.+..|++.|++|+..+.++.|+|||.+|+|| ||+++||||++.++ +.++|++++.. ..
T Consensus 90 i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~VlVHC~aG~gR-Sg~~va~~L~~~g~--~~~~a~~~vr~~R~~~v~~~ 164 (189)
T 3rz2_A 90 FDD--GAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGR-APVLVALALIEGGM--KYEDAVQFIRQKRRGAFNSK 164 (189)
T ss_dssp CCS--SSCCCSHHHHHHHHHHHHHHHHSTTCEEEEECSSSSTT-HHHHHHHHHHTTTC--CHHHHHHHHHTTSSSCCCHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHhCCCCcEEEECCCCCCH-HHHHHHHHHHHcCC--CHHHHHHHHHHHCcCCCCHH
Confidence 653 34578899999999999999888889999999999999 99999999997654 67789988742 35
Q ss_pred hhhhhccc
Q 001026 163 PRELLQLM 170 (1184)
Q Consensus 163 q~ryl~yf 170 (1184)
|.+||++|
T Consensus 165 Q~~~l~~~ 172 (189)
T 3rz2_A 165 QLLYLEKY 172 (189)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHH
Confidence 66666666
No 12
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=99.25 E-value=7.7e-11 Score=118.45 Aligned_cols=135 Identities=10% Similarity=0.079 Sum_probs=95.1
Q ss_pred cCCCCCceeeeCc-EEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEec
Q 001026 10 RKPPDGLLEISER-VFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDY 88 (1184)
Q Consensus 10 ~~~~lDLtyIT~R-Iiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~ 88 (1184)
.++++|++||+++ +|.+ ++|+ ..+-.++|.+. + --.|+||+++..+.. ..+. +..+.++
T Consensus 3 ~~~p~~~~~I~~~~l~~~--~~p~-----------~~~~~~~l~~~--g-i~~Vv~l~~~~e~~~--~~~~--~~~~~~~ 62 (151)
T 2img_A 3 GVQPPNFSWVLPGRLAGL--ALPR-----------LPAHYQFLLDL--G-VRHLVSLTERGPPHS--DSCP--GLTLHRL 62 (151)
T ss_dssp CCCCTTCEEEETTTEEEE--SCCC-----------SHHHHHHHHHT--T-EEEEEECSSSCCTTG--GGCT--TSEEEEC
T ss_pred CCCCCCcEEeecCceeee--CCCC-----------cHHHHHHHHHC--C-CCEEEECCCCCCCCH--HHHh--hCCeEEE
Confidence 5678999999998 7777 4772 12224566553 3 378999998732221 1111 2236666
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhh--------
Q 001026 89 PRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYK-------- 160 (1184)
Q Consensus 89 P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~-------- 160 (1184)
|+ .|+..|.++.+..+++.|++|+.. +..|+|||.+|+|| ||+++||||++...+ +.++|++++..
T Consensus 63 ~~--~d~~~p~~~~~~~~~~~i~~~~~~--~~~vlVHC~aG~~R-sg~~~~~~l~~~~~~-~~~~a~~~~r~~R~~~~~~ 136 (151)
T 2img_A 63 RI--PDFCPPAPDQIDRFVQIVDEANAR--GEAVGVHCALGFGR-TGTMLACYLVKERGL-AAGDAIAEIRRLRPGSIET 136 (151)
T ss_dssp CC--CTTCCCCHHHHHHHHHHHHHHHHT--TCEEEEECSSSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHHHHSTTCSCS
T ss_pred eC--CCCCCCCHHHHHHHHHHHHHHHhC--CCcEEEECCCCCCh-HHHHHHHHHHHHhCc-CHHHHHHHHHHHCCCCCCC
Confidence 54 455567889999999999999975 45899999999999 999999999998443 67789988742
Q ss_pred hchhhhhccc
Q 001026 161 QAPRELLQLM 170 (1184)
Q Consensus 161 pSq~ryl~yf 170 (1184)
+.|.+||+.|
T Consensus 137 ~~q~~~l~~~ 146 (151)
T 2img_A 137 YEQEKAVFQF 146 (151)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3566666655
No 13
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=99.22 E-value=1.7e-10 Score=116.02 Aligned_cols=134 Identities=11% Similarity=0.063 Sum_probs=96.6
Q ss_pred CCCCCceeeeCc-EEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecC
Q 001026 11 KPPDGLLEISER-VFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYP 89 (1184)
Q Consensus 11 ~~~lDLtyIT~R-Iiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P 89 (1184)
.+++|++||+++ |+.+ ++|.. .+-..+|++. + =..|+||+++..... ....+.++.++|
T Consensus 3 ~pp~~~~~i~~~~l~~~--~~p~~-----------~~~~~~L~~~--g-i~~Vi~l~~~~~~~~----~~~~~~~~~~~~ 62 (150)
T 4erc_A 3 VQPPNFSWVLPGRLAGL--ALPRL-----------PAHYQFLLDL--G-VRHLVSLTERGPPHS----DSCPGLTLHRLR 62 (150)
T ss_dssp CCCTTCEEEETTTEEEE--SCCCS-----------HHHHHHHHHT--T-EEEEEECSSSCCTTG----GGCTTSEEEECC
T ss_pred CCCCCCEEeccCceeee--cCCCC-----------HHHHHHHHHC--C-CCEEEEcCCCCCCcc----cccCCceEEEEe
Confidence 467999999998 8888 47742 1124566653 3 278999998754321 122345677776
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhh--------h
Q 001026 90 RHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYK--------Q 161 (1184)
Q Consensus 90 ~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~--------p 161 (1184)
+. |+..+.++.+..+++-|++|+..+ ..|+|||.+|++| ||+++||||++...+ +.++|++++.. .
T Consensus 63 ~~--d~~~~~~~~~~~~~~~i~~~~~~~--~~vlVHC~~G~~R-sg~~~a~~l~~~~~~-~~~~a~~~vr~~R~~~~~~~ 136 (150)
T 4erc_A 63 IP--DFCPPAPDQIDRFVQIVDEANARG--EAVGVHCALGFGR-TGTMLACYLVKERGL-AAGDAIAEIRRLRPGSIETY 136 (150)
T ss_dssp CC--TTSCCCHHHHHHHHHHHHHHHHTT--CEEEEECSSSSHH-HHHHHHHHHHHHHTC-CHHHHHHHHHHHSTTCCCSH
T ss_pred cC--CCCCCCHHHHHHHHHHHHHHHHCC--CCEEEECCCCCCH-HHHHHHHHHHHHcCC-CHHHHHHHHHHHCCCCCCCH
Confidence 54 445678999999999999998754 5899999999999 999999999986554 67779888732 3
Q ss_pred chhhhhccc
Q 001026 162 APRELLQLM 170 (1184)
Q Consensus 162 Sq~ryl~yf 170 (1184)
.|.+||+.|
T Consensus 137 ~q~~~l~~~ 145 (150)
T 4erc_A 137 EQEKAVFQF 145 (150)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556666544
No 14
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=99.21 E-value=5.7e-11 Score=136.69 Aligned_cols=132 Identities=12% Similarity=0.098 Sum_probs=97.2
Q ss_pred CCCCCceeeeC-cEEEecCCCCCCcc-hhHHhh-ccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEe
Q 001026 11 KPPDGLLEISE-RVFVFDCCFTTDIL-EEEEYK-EYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMD 87 (1184)
Q Consensus 11 ~~~lDLtyIT~-RIiams~gfPa~~~-~e~~YR-N~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~ 87 (1184)
-..+|++||++ ++|+|+ +|.+.. .|..|+ +..++..++|+++ + -..|+||+++.+... .+...+.++.+
T Consensus 173 v~~~~~~~I~p~~~i~~~--~P~~~~~~~~~~~~~~~~~~~~~L~~~-G--I~~VInL~~~~y~~~---~~~~~gi~~~~ 244 (348)
T 1ohe_A 173 AENGDLNWIIPDRFIAFC--GPHSRARLESGYHQHSPETYIQYFKNH-N--VTTIIRLNKRMYDAK---RFTDAGFDHHD 244 (348)
T ss_dssp GGGTCEEEEETTTEEEEC--CCCSSCBCSTTCCBCCTHHHHHHHHHT-T--EEEEEECSCCSSCTH---HHHTTTCEEEE
T ss_pred ccCCCCCEEeCCeEEEEC--CCccccccccccccCCHHHHHHHHHHc-C--CCEEEECCCCcCChh---hhhcCCcEEEE
Confidence 34578999998 699995 787531 144455 6788889999873 3 278999998754421 12234567888
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 88 YPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 88 ~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+|+. |+..|..+++..|++.++ +.++.|+|||++|+|| ||+|+||||++...+ +.++|++++.
T Consensus 245 ipi~--D~~~P~~~~~~~fi~~~~-----~~~~~VLVHC~aG~gR-TGtvvaayLm~~~g~-s~~eAl~~vr 307 (348)
T 1ohe_A 245 LFFA--DGSTPTDAIVKEFLDICE-----NAEGAIAVHSKAGLGR-TGTLIACYIMKHYRM-TAAETIAWVR 307 (348)
T ss_dssp CCCC--TTCCCCHHHHHHHHHHHH-----SCSSEEEEECSSSSHH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred ecCC--CCCCCCHHHHHHHHHHHH-----hCCCcEEEECCCCCCh-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 8665 445678888888877553 4578999999999999 999999999995443 7778999874
No 15
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=99.16 E-value=1.6e-10 Score=117.18 Aligned_cols=141 Identities=14% Similarity=0.179 Sum_probs=101.7
Q ss_pred CCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCC
Q 001026 11 KPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPR 90 (1184)
Q Consensus 11 ~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~ 90 (1184)
....+++|...++|++. .|. .+.++|-.++|.+ ++- -.|.||+++.+.... ....+..+.++|.
T Consensus 6 p~~~~~~~~~~~~i~s~--~p~--------~~t~~df~~~l~~-~gi--~~Iv~l~~~~~~~~~---~~~~~~~~~~~p~ 69 (159)
T 1rxd_A 6 PAPVEVTYKNMRFLITH--NPT--------NATLNKFIEELKK-YGV--TTIVRVCEATYDTTL---VEKEGIHVLDWPF 69 (159)
T ss_dssp --CEEEEETTEEEEECC--CCC--------GGGHHHHHHHHHH-TTE--EEEEECSCCCSCCHH---HHHTTCEEEECCC
T ss_pred CCcccccCCCceEEEeC--CCc--------cccHHHHHHHHHH-cCC--CEEEEcCCCccCHHH---HHHcCCEEEeCCC
Confidence 34467788888999985 564 2566676677765 332 567899998665321 2234567888885
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhh-------hch
Q 001026 91 HYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYK-------QAP 163 (1184)
Q Consensus 91 ~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~-------pSq 163 (1184)
++ ...+..+.+..+++.|++|+.++.+..|+|||.+|+|| ||+++|+||+..+ -+.++|++++.. ..|
T Consensus 70 ~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~vlVHC~aG~~R-tg~~~a~~l~~~~--~~~~~a~~~vr~~R~~~~~~~q 144 (159)
T 1rxd_A 70 DD--GAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGR-APVLVALALIEGG--MKYEDAVQFIRQKRRGAFNSKQ 144 (159)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHHSTTCEEEEECSSSSTT-HHHHHHHHHHHTT--CCHHHHHHHHHTTCTTCCCHHH
T ss_pred cC--CCCCCHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH-HHHHHHHHHHHhC--CCHHHHHHHHHHHCCCCCCHHH
Confidence 43 33567899999999999999888788999999999999 9999999999865 366789988742 356
Q ss_pred hhhhcccCC
Q 001026 164 RELLQLMSP 172 (1184)
Q Consensus 164 ~ryl~yfs~ 172 (1184)
.+||+.|..
T Consensus 145 ~~~l~~~~~ 153 (159)
T 1rxd_A 145 LLYLEKYRP 153 (159)
T ss_dssp HHHHHHCCC
T ss_pred HHHHHHHHH
Confidence 667766643
No 16
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=99.11 E-value=3.7e-10 Score=115.38 Aligned_cols=136 Identities=11% Similarity=0.107 Sum_probs=97.5
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEG 94 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~ 94 (1184)
+++|..-|.|++. -|.+ +.+++-.++|.++. --.|.|||++.+... .+...+.++.++|+. +
T Consensus 17 ~~~~~~~~~i~tq--~P~~--------~t~~~~~~~l~~~g---i~~Iv~l~~~~~~~~---~~~~~~i~~~~~p~~--d 78 (167)
T 3s4o_A 17 KPSRVLFHFLILD--APSP--------SNLPTYIKELQHRG---VRHLVRVCGPTYDAT---LVKSRGIDVHSWPFD--D 78 (167)
T ss_dssp CTTSEEEEEEEEC--CCCG--------GGHHHHHHHHHTTT---EEEEEECSCCCSCTH---HHHTTTCEEEECCCC--T
T ss_pred CcccccceEEEeC--CCch--------hhHHHHHHHHHHCC---CCEEEECCCCCCCHH---HHHHCCCeEEEeccC--C
Confidence 4677777999995 5653 33445556666532 257999999865432 133456778888765 4
Q ss_pred CCCCcHHHHHHHHHHHHHHHhc------CCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhh-------h
Q 001026 95 CPLLTMETVHHFLRSSESWLSL------GHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYK-------Q 161 (1184)
Q Consensus 95 ~p~p~L~~l~~~c~~i~~WL~~------d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~-------p 161 (1184)
+..|.++.+..|++.++.++.. +.+..|+|||.+|+|| ||+++|+||++.+. -+.++|++++-. .
T Consensus 79 ~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vlVHC~aG~~R-Tg~~~a~~L~~~~~-~~~~~a~~~vr~~R~~~v~~ 156 (167)
T 3s4o_A 79 GAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGR-APILVALALVEYGN-VSALDAIALIREKRKGAINQ 156 (167)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHCTTCCCCEEEEECSSSSSH-HHHHHHHHHHHTTC-CCHHHHHHHHHHHSTTCSCH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhccccCCCcEEEECCCCCCH-HHHHHHHHHHHhCC-CCHHHHHHHHHHHCCCCCCH
Confidence 4567888899999999999887 5677999999999999 99999999999633 356778887732 3
Q ss_pred chhhhhccc
Q 001026 162 APRELLQLM 170 (1184)
Q Consensus 162 Sq~ryl~yf 170 (1184)
.|.+||+.|
T Consensus 157 ~Q~~fl~~~ 165 (167)
T 3s4o_A 157 TQMHWITKY 165 (167)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhh
Confidence 566666655
No 17
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=99.10 E-value=4.6e-10 Score=120.27 Aligned_cols=135 Identities=11% Similarity=0.095 Sum_probs=93.0
Q ss_pred CCCCceeeeC-------cEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCC----cC-cccccccc
Q 001026 12 PPDGLLEISE-------RVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGE----HQ-SQIGQVLS 79 (1184)
Q Consensus 12 ~~lDLtyIT~-------RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~----~~-~~~~~~~~ 79 (1184)
.++++.+|.+ ||+.| ++|+... .+ ++..+.+-..+|.+..- -.|+||+++. +. ..+.+.+.
T Consensus 25 ~p~~~~~v~~~~~~~~g~l~~~--~~Pg~~~-~~-~~~~~~~d~~~L~~~gi---~~Vv~l~~~~E~~~~~~~~~~~~~~ 97 (212)
T 1fpz_A 25 TPIHISWLSLSRVNCSQFLGLC--ALPGCKF-KD-VRRNVQKDTEELKSCGI---QDIFVFCTRGELSKYRVPNLLDLYQ 97 (212)
T ss_dssp CCCCCEEEECGGGTCCCEEEEE--SCTTCEE-TT-EECCHHHHHHHHHHHTC---CEEEECCCHHHHHHTTCTTHHHHHH
T ss_pred CCcceEEeccCCcCCCCeEEEe--cCCCCCC-cc-chhhHHHHHHHHHHCCC---CEEEEcCCHHHHHhcCCccHHHHHH
Confidence 4588999976 35566 5787533 23 33445555677776433 4699998752 11 11111123
Q ss_pred cCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHH
Q 001026 80 EYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMI 158 (1184)
Q Consensus 80 ~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~ 158 (1184)
..+.++.++|+. |+..|.++.+..+++.|+.++.. +.-|+|||.+|+|| ||+++||||++.+.-.+.++|++++
T Consensus 98 ~~gi~~~~~pi~--d~~~p~~~~~~~~~~~i~~~~~~--~~~VlVHC~aG~gR-Tg~~~a~~L~~~~~g~~~~~a~~~v 171 (212)
T 1fpz_A 98 QCGIITHHHPIA--DGGTPDIASCCEIMEELTTCLKN--YRKTLIHSYGGLGR-SCLVAACLLLYLSDTISPEQAIDSL 171 (212)
T ss_dssp HTTCEEEECCCC--TTCCCCHHHHHHHHHHHHHHHHT--TCCEEEECSSSSSH-HHHHHHHHHHHHCSSCCHHHHHHHH
T ss_pred HcCCEEEEecCC--CCCCCCHHHHHHHHHHHHHHHhC--CCCEEEECCCCCCH-HHHHHHHHHHHhccCCCHHHHHHHH
Confidence 456778888754 44567889999999999999974 34699999999999 9999999999864345677788876
No 18
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=98.92 E-value=1e-09 Score=110.86 Aligned_cols=124 Identities=14% Similarity=0.154 Sum_probs=80.4
Q ss_pred CCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCC
Q 001026 12 PPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRH 91 (1184)
Q Consensus 12 ~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~ 91 (1184)
+++++.+|+++||..+ +++. + + ..+|++ ++- -.|+||+.+.......+.....+.++.++|+.
T Consensus 4 pp~n~~~v~~~l~~s~--~~~~---~--------d-~~~L~~-~gi--~~Vi~l~~~~e~~~~~~~~~~~gi~~~~ipi~ 66 (151)
T 1xri_A 4 PPLNFSMVDNGIFRSG--FPDS---A--------N-FSFLQT-LGL--RSIIYLCPEPYPESNLQFLKSNGIRLFQFGIE 66 (151)
T ss_dssp CCTTCEEEETTEEEES--CCCH---H--------H-HHHHHH-HTC--SEEEECCSSCCCHHHHHHHHHHTCEEEECCCC
T ss_pred CCcCcCeeCCCeEECC--CcCc---c--------C-HHHHHH-CCC--CEEEECCCCCcChhHHHHHHhcCCeEEecccc
Confidence 4678999999988884 6642 1 2 366665 333 57999998765432222122235677888875
Q ss_pred CCCCC--CCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 92 YEGCP--LLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 92 ~~~~p--~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+.+.+ ....+.+.++ -+|+....+..|+|||.+|++| ||+++|+||++.|+ +.++|++.|.
T Consensus 67 d~~~~~~~~~~~~~~~~----~~~i~~~~~~~vlvHC~aG~~R-Tg~~~a~~l~~~g~--~~~~a~~~~~ 129 (151)
T 1xri_A 67 GNKEPFVNIPDHKIRMA----LKVLLDEKNHPVLIHCKRGKHR-TGCLVGCLRKLQKW--CLTSIFDEYQ 129 (151)
T ss_dssp CCCGGGCCCCHHHHHHH----HHHHHCGGGCSEEEECSSSSSH-HHHHHHHHHHHTTB--CHHHHHHHHH
T ss_pred cccCccccCCHHHHHHH----HHHHHcCCCCCEEEECCCCCCH-HHHHHHHHHHHhCC--CHHHHHHHHH
Confidence 43211 2233434333 3455444456799999999999 99999999987654 6777888763
No 19
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=98.90 E-value=9.2e-09 Score=104.12 Aligned_cols=122 Identities=15% Similarity=0.164 Sum_probs=85.3
Q ss_pred eeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCccc---ccccccCCceEEecCCCCC
Q 001026 17 LEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQI---GQVLSEYDMTVMDYPRHYE 93 (1184)
Q Consensus 17 tyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~---~~~~~~f~~~V~~~P~~~~ 93 (1184)
+.|+++|++.+ ++.. .++..+|++ ++- -.|.||+++...... .......+.+..++|..+.
T Consensus 3 ~~I~~~l~~g~--~~~~-----------~~~~~ll~~-~gi--~~Vi~l~~~~e~~~~~~~~~~~~~~gi~~~~~p~~d~ 66 (157)
T 3rgo_A 3 HRIDHTVLLGA--LPLK-----------NMTRRLVLD-ENV--RGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDM 66 (157)
T ss_dssp EECSSSEEEES--CCCG-----------GGHHHHHHH-SCE--EEEEEESCCTTTTTSSCCHHHHHHTTCEEEEECCCTT
T ss_pred ccccCCeEEec--CcCc-----------cchHHHHHH-cCC--CEEEECccccccccccCCHHHHHHCCCeEEEecCCCC
Confidence 57999999994 7753 223444543 433 579999876433211 0111224567788877543
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 94 GCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 94 ~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
. ..+.++.+..+++-|+.++..+ ..|+|||.+|+|| ||++++|||++...+ +.++|++++.
T Consensus 67 ~-~~~~~~~~~~~~~~i~~~~~~~--~~vlVHC~~G~~R-sg~~~~a~l~~~~~~-~~~~a~~~v~ 127 (157)
T 3rgo_A 67 T-GVPTLANLHKGVQFALKYQALG--QCVYVHCKAGRSR-SATMVAAYLIQVHNW-SPEEAIEAIA 127 (157)
T ss_dssp T-SSCCHHHHHHHHHHHHHHHHTT--CEEEEESSSSSSH-HHHHHHHHHHHHHTC-CHHHHHHHHH
T ss_pred C-CCChHHHHHHHHHHHHHHHHCC--CEEEEECCCCCCh-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 2 2578899999999999998754 4799999999999 899999999987544 5667888874
No 20
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=98.81 E-value=5.9e-09 Score=106.00 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=79.5
Q ss_pred ceeeeCc-EEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCC-cCccc------ccccccCCceEEe
Q 001026 16 LLEISER-VFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGE-HQSQI------GQVLSEYDMTVMD 87 (1184)
Q Consensus 16 LtyIT~R-Iiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~-~~~~~------~~~~~~f~~~V~~ 87 (1184)
++||+++ |+.+ +++.. .+-..+|.+. +- -.|+||+++. ..... .+.....+.+..+
T Consensus 1 ~~~I~~~~l~~~--~~~~~-----------~~d~~~L~~~-gi--~~Vi~l~~~~e~~~~~~~~~~~~~~~~~~gi~~~~ 64 (161)
T 2i6j_A 1 MYWVRRKTIGGS--GLPYT-----------ENEILEWRKE-GV--KRVLVLPEDWEIEESWGDKDYYLSILKKNGLQPLH 64 (161)
T ss_dssp CEEEETTTEEEE--CCCSS-----------HHHHHHHHHH-TC--CEEEECSCHHHHHHHHSCHHHHHHHHHHTTCEEEE
T ss_pred CCcccccceeec--CCCCC-----------HHHHHHHHHC-CC--CEEEEcCchhhhhhhccchhhHHHHHHHcCceEEE
Confidence 4799998 7777 57751 1123556553 33 3599998762 21110 0002234567888
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 88 YPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 88 ~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+|+ .|+..|.++.+..|++.|++++..+ +|||.+|+|| ||+++|+||++... .+.++|++++.
T Consensus 65 ~p~--~d~~~p~~~~~~~~~~~i~~~~~~~-----lVHC~aG~~R-tg~~~~~~l~~~~~-~~~~~a~~~~r 127 (161)
T 2i6j_A 65 IPI--PDGGVPSDSQFLTIMKWLLSEKEGN-----LVHCVGGIGR-TGTILASYLILTEG-LEVESAIDEVR 127 (161)
T ss_dssp CCC--CTTCCCCHHHHHHHHHHHHHCCTTE-----EEECSSSSHH-HHHHHHHHHHHHHC-CCHHHHHHHHH
T ss_pred ecC--CCCCCCChHHHHHHHHHHHHhCCCC-----EEECCCCCCH-HHHHHHHHHHHHcC-CCHHHHHHHHH
Confidence 874 4555678888888888777765432 9999999999 99999999999843 45667888773
No 21
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=98.80 E-value=1.2e-08 Score=102.26 Aligned_cols=108 Identities=11% Similarity=0.007 Sum_probs=70.7
Q ss_pred hHHhhccHHHHH--HHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCCCCCCc-HHHHHHHHHHHHHH
Q 001026 37 EEEYKEYLGGIV--GQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLT-METVHHFLRSSESW 113 (1184)
Q Consensus 37 e~~YRN~i~dV~--~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~~p~p~-L~~l~~~c~~i~~W 113 (1184)
+..|+....... .+|++ ++- -.|+||+++.... ..-+.+..++|+.|. .... .+.+..+++-|+.+
T Consensus 9 ~~lylg~~~~a~~~~~L~~-~gI--~~Vi~l~~~~~~~------~~~~~~~~~ip~~D~--~~~~~~~~~~~~~~~i~~~ 77 (144)
T 3ezz_A 9 PFLYLGSAYHAARRDMLDA-LGI--TALLNVSSDCPNH------FEGHYQYKCIPVEDN--HKADISSWFMEAIEYIDAV 77 (144)
T ss_dssp TTEEEEEHHHHTCHHHHHH-TTC--CEEEECSSSCCCT------TTTTSEEEECCCCSS--SSCCTTTTHHHHHHHHHHH
T ss_pred CCEEECChhhcCCHHHHHH-CCC--eEEEEccCCCCcc------CCCCceEEEEEcccC--CCCChHHHHHHHHHHHHHH
Confidence 445554444332 56655 333 5799999864321 112346677766543 3333 24555666666676
Q ss_pred HhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 114 LSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 114 L~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+..+ ..|+|||.+|++| ||+|++|||++...+ +.++|++++.
T Consensus 78 ~~~~--~~VlVHC~~G~~R-S~~~~~aylm~~~~~-~~~~A~~~v~ 119 (144)
T 3ezz_A 78 KDCR--GRVLVHSQAGISR-SATICLAYLMMKKRV-RLEEAFEFVK 119 (144)
T ss_dssp HHTT--CCEEEEESSSSSH-HHHHHHHHHHHHHTC-CHHHHHHHHH
T ss_pred HhcC--CeEEEECCCCCCh-hHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 6643 4689999999999 899999999997665 6778999884
No 22
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=98.78 E-value=3.2e-08 Score=103.18 Aligned_cols=128 Identities=15% Similarity=0.237 Sum_probs=85.8
Q ss_pred cCCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCccc---ccccccCCceEE
Q 001026 10 RKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQI---GQVLSEYDMTVM 86 (1184)
Q Consensus 10 ~~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~---~~~~~~f~~~V~ 86 (1184)
+.+..++..|+++||.-+ +++. .+ ..+|++ ++- =.|.||+++...... ...+...+..+.
T Consensus 22 ~~p~~~~~~I~p~Lylg~--~~~a--------~d----~~~L~~-~gI--~~Vi~l~~~~~~~~~~~~~~~~~~~gi~~~ 84 (183)
T 3f81_A 22 SLPSQPCNEVTPRIYVGN--ASVA--------QD----IPKLQK-LGI--THVLNAAEGRSFMHVNTNANFYKDSGITYL 84 (183)
T ss_dssp CCCSSSEEEEETTEEEEC--HHHH--------TC----HHHHHH-HTC--CEEEETTBSSSTTSBCCCTGGGTTTTCEEE
T ss_pred cCCCcCcceEeCCEEECC--chhh--------hC----HHHHHH-CCC--cEEEECCCCccccccccchhhcccCCCEEE
Confidence 566789999999998874 3321 11 345554 333 469999987542111 111223455777
Q ss_pred ecCCCCCCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 87 DYPRHYEGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 87 ~~P~~~~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
++|+.+. ..+.+ +.+..+++-|+.++... +.-|+|||.+|++| ||+|++|||++...+ +.++|++++.
T Consensus 85 ~ip~~D~--~~~~~~~~~~~~~~~i~~~~~~~-~~~VlVHC~~G~~R-Sg~~v~ayLm~~~~~-~~~~A~~~v~ 153 (183)
T 3f81_A 85 GIKANDT--QEFNLSAYFERAADFIDQALAQK-NGRVLVHCREGYSR-SPTLVIAYLMMRQKM-DVKSALSIVR 153 (183)
T ss_dssp ECCCCCS--TTSCGGGGHHHHHHHHHHHHHST-TCCEEEECSSSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred EEEcCCC--CcccHHHHHHHHHHHHHHHHHcC-CCeEEEECCCCcch-HHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 8876543 33444 45667777778887762 34579999999999 899999999987665 6777999884
No 23
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=98.75 E-value=9.2e-09 Score=110.99 Aligned_cols=142 Identities=13% Similarity=0.068 Sum_probs=82.1
Q ss_pred hhhccCCCCCceeeeCc------EEEecCCCCC----CcchhHHhhccHHHH--HHHHhhhCCCCcEEEEEeccCCcCcc
Q 001026 6 KFFYRKPPDGLLEISER------VFVFDCCFTT----DILEEEEYKEYLGGI--VGQLREYFPEASFMVFNFREGEHQSQ 73 (1184)
Q Consensus 6 r~~~~~~~lDLtyIT~R------Iiams~gfPa----~~~~e~~YRN~i~dV--~~fL~~~H~~~~y~V~Nl~ee~~~~~ 73 (1184)
||...+.++| |+|.+ ++.+. .+. ..+.+..|.-..... ..+|++ ++- =.|+||+++.+...
T Consensus 22 ~~~~~~~~~~--y~~p~~~~l~~~~~~~--~~~~~~~~~I~p~LylG~~~~a~d~~~L~~-~gI--t~VInl~~~~~~~~ 94 (219)
T 2y96_A 22 KMEEEGEEED--YCTPGAFELERLFWKG--SPQYTHVNEVWPKLYIGDEATALDRYRLQK-AGF--THVLNAAHGRWNVD 94 (219)
T ss_dssp ---------C--CCCCCHHHHHHHHHHC--SSCCCSEEEEETTEEEECHHHHHCHHHHHH-TTC--CEEEETTBSTTSBC
T ss_pred cccccCCCCC--CCCCCHHHHHHHHhcC--CccCCCceEEECCEEECChhHhCCHHHHHH-CCC--eEEEECCCCccccc
Confidence 3444444445 77776 55552 221 112355676555444 346654 443 36999997653210
Q ss_pred -cccccccCCceEEecCCCCCCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcH
Q 001026 74 -IGQVLSEYDMTVMDYPRHYEGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGE 151 (1184)
Q Consensus 74 -~~~~~~~f~~~V~~~P~~~~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~ 151 (1184)
..+.+...+.+..++|+.+ .+...+ +.+..+++-|++++. ..++.|+|||.+|++| +|+|++||||+...+ +.
T Consensus 95 ~~~~~~~~~~i~y~~ipi~D--~~~~~l~~~~~~~~~fI~~~l~-~~~~~VLVHC~aG~sR-S~tvv~aYLm~~~~~-s~ 169 (219)
T 2y96_A 95 TGPDYYRDMDIQYHGVEADD--LPTFDLSVFFYPAAAFIDRALS-DDHSKILVHCVMGRSR-SATLVLAYLMIHKDM-TL 169 (219)
T ss_dssp CHHHHTTTSCCEEEECCCCS--STTSCGGGGHHHHHHHHHHHHT-STTCCEEEECSSSSSH-HHHHHHHHHHHHSCC-CH
T ss_pred cchhhhcccCcEEEEEECCC--CCchhHHHHHHHHHHHHHHHHH-ccCCeEEEECCCCCCH-HHHHHHHHHHHHcCC-CH
Confidence 0111112345667777654 333343 455666777777773 2346899999999999 899999999987665 77
Q ss_pred HHHHHHHh
Q 001026 152 QKTLDMIY 159 (1184)
Q Consensus 152 ~~aL~~~~ 159 (1184)
++|++++.
T Consensus 170 ~eAl~~vr 177 (219)
T 2y96_A 170 VDAIQQVA 177 (219)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88999884
No 24
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=98.62 E-value=2.3e-07 Score=95.05 Aligned_cols=117 Identities=11% Similarity=0.118 Sum_probs=79.2
Q ss_pred CCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCC
Q 001026 14 DGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYE 93 (1184)
Q Consensus 14 lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~ 93 (1184)
.+++.|+++|++-+ ++.. .+ ..+|++ ++- -.|+||+++.... ...+.+..++|..+.
T Consensus 10 ~~~~~I~~~l~lg~--~~~~--------~d----~~~L~~-~gI--~~Vi~l~~~~~~~------~~~~~~~~~ip~~D~ 66 (164)
T 2hcm_A 10 PPFARVAPALFIGN--ARAA--------GA----TELLVR-AGI--TLCVNVSRQQPGP------RAPGVAELRVPVFDD 66 (164)
T ss_dssp CSEEEEETTEEEEE--GGGG--------GC----HHHHHH-TTE--EEEEECSSSCCCC------CCTTCEEEECCCCSC
T ss_pred CCCeEEeCCEEECC--hhhh--------cC----HHHHHH-CCC--eEEEEcCCCCCCC------CCCCCEEEEEeCcCC
Confidence 57899999999885 5431 11 345544 332 5799999875331 123456677776533
Q ss_pred CCCCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 94 GCPLLT-METVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 94 ~~p~p~-L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+... .+.+..+++-|+.++.. +.-|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 67 --~~~~~~~~~~~~~~~i~~~~~~--~~~VlVHC~aG~~R-Sg~~~~ayLm~~~~~-~~~~A~~~v~ 127 (164)
T 2hcm_A 67 --PAEDLLTHLEPTCAAMEAAVRD--GGSCLVYCKNGRSR-SAAVCTAYLMRHRGH-SLDRAFQMVK 127 (164)
T ss_dssp --TTSCCHHHHHHHHHHHHHHHHT--TCEEEEEESSSSHH-HHHHHHHHHHHHSCC-CHHHHHHHHH
T ss_pred --CCchHHHHHHHHHHHHHHHHHc--CCEEEEECCCCCch-HHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 3222 34556666666666653 45899999999999 899999999987654 6778998874
No 25
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=98.60 E-value=4.2e-07 Score=91.45 Aligned_cols=118 Identities=13% Similarity=0.061 Sum_probs=77.0
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEG 94 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~ 94 (1184)
+++.|+++||+-+ ++.. .+ ..+|++ ++- -.|.||+++.-.. . ....+.+..++|+.+.
T Consensus 3 ~~~~I~~~ly~g~--~~~~--------~d----~~~L~~-~gi--~~Vi~l~~e~p~~-~---~~~~~~~~~~ipi~D~- 60 (149)
T 1zzw_A 3 ELTPILPFLFLGN--EQDA--------QD----LDTMQR-LNI--GYVINVTTHLPLY-H---YEKGLFNYKRLPATDS- 60 (149)
T ss_dssp CCEEEETTEEEEC--TTGG--------GC----HHHHHH-TTE--EEEEECCSSSCCT-T---GGGTCSEEEECCCCCS-
T ss_pred CceEeeCCeEECC--hhHh--------hC----HHHHHH-CCC--cEEEEecCCCCCc-c---cCCCCeEEEEEECCCC-
Confidence 5789999998874 5542 11 245543 333 4688998763211 0 1123556777776543
Q ss_pred CCCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 95 CPLLT-METVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 95 ~p~p~-L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
.... .+.+..+++-|+.++.. +.-|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 61 -~~~~~~~~~~~~~~~i~~~~~~--~~~VlVHC~~G~~R-Sg~~~~ayl~~~~~~-~~~~a~~~v~ 121 (149)
T 1zzw_A 61 -NKQNLRQYFEEAFEFIEEAHQC--GKGLLIHCQAGVSR-SATIVIAYLMKHTRM-TMTDAYKFVK 121 (149)
T ss_dssp -SSCCCHHHHHHHHHHHHHHHHT--TCEEEEECSSSSSH-HHHHHHHHHHHHSCC-CHHHHHHHHH
T ss_pred -CcccHHHHHHHHHHHHHHHHHc--CCeEEEECCCCCCH-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 2233 34555666666666653 45799999999999 899999999986443 6778999874
No 26
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=98.58 E-value=1.9e-07 Score=98.33 Aligned_cols=122 Identities=12% Similarity=0.025 Sum_probs=78.0
Q ss_pred ccCCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEec
Q 001026 9 YRKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDY 88 (1184)
Q Consensus 9 ~~~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~ 88 (1184)
....-.+++.|+++||+-+ +++. .+ ..+|++ ++- -.|+||+++.... ..-+....++
T Consensus 19 ~~~~~~~~~~I~~~LylG~--~~~a--------~d----~~~L~~-~gI--~~Vi~l~~~~~~~------~~~gi~y~~i 75 (190)
T 2wgp_A 19 SEGDIGGIAQITSSLFLGR--GSVA--------SN----RHLLQA-RGI--TCIVNATIEIPNF------NWPQFEYVKV 75 (190)
T ss_dssp ----CTTEEEEETTEEEEC--HHHH--------TC----HHHHHH-TTC--CEEEECCSSSCCC------CCTTSEEEEC
T ss_pred CCCCCCCceEEeCcEEEcC--hhhh--------cC----HHHHHH-CCC--cEEEEecCCCCCC------CCCCCEEEEE
Confidence 3333457899999998874 4321 11 345544 333 4699999875332 1124566777
Q ss_pred CCCCCCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 89 PRHYEGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 89 P~~~~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
|+.+. ..+.+ +.+..+++-|+..+.. +..|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 76 pi~D~--~~~~l~~~~~~~~~fi~~~~~~--~~~VlVHC~aG~~R-Sgtvv~ayLm~~~~~-s~~~A~~~v~ 141 (190)
T 2wgp_A 76 PLADM--PHAPIGLYFDTVADKIHSVSRK--HGATLVHCAAGVSR-SATLCIAYLMKFHNV-CLLEAYNWVK 141 (190)
T ss_dssp CCCSS--TTSCGGGGHHHHHHHHHHHHHT--TCCEEEECSSSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred EcccC--CCCCHHHHHHHHHHHHHHHHhc--CCCEEEECCCCCCH-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 76533 33343 4455556656666653 34699999999999 899999999987655 6778998874
No 27
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=98.56 E-value=8.4e-08 Score=108.00 Aligned_cols=127 Identities=9% Similarity=0.070 Sum_probs=86.5
Q ss_pred CCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcc-------cccccccC-Cc
Q 001026 12 PPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQ-------IGQVLSEY-DM 83 (1184)
Q Consensus 12 ~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~-------~~~~~~~f-~~ 83 (1184)
..+++++|+++||+.+ ++.. .+++ .+|++ ++- =.|.||+++..... +.+....+ +.
T Consensus 9 ~~~n~s~I~p~LylGs--~~~~----------~~d~-~~L~~-~GI--t~Vlnl~~~~e~~~~g~~~~~~~~~~~~~~gi 72 (294)
T 3nme_A 9 LGMNYNFIRPDLIVGS--CLQT----------PEDV-DKLRK-IGV--KTIFCLQQDPDLEYFGVDISSIQAYAKKYSDI 72 (294)
T ss_dssp GCCCEEEEETTEEEEC--CCCS----------THHH-HHHHH-TTE--EEEEECCCHHHHHHTTCCHHHHHHHHHTCTTC
T ss_pred CCCCceEEeCCEEEEc--CCCC----------HHHH-HHHHH-CCC--CEEEECCCCcchhhccCChhhhhhhhhhcCCc
Confidence 4567888999999996 4431 1233 45654 333 57999987642110 00001223 46
Q ss_pred eEEecCCCCCCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 84 TVMDYPRHYEGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 84 ~V~~~P~~~~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
...++|+.+ +..+.+ ..+..+++.|+.+|+++ .+.|+|||++|.+| +|+|++|||++...+ +.++|++++.
T Consensus 73 ~~~~ipi~D--~~~~~l~~~~~~~~~~I~~~l~~~-g~~VLVHC~aG~sR-S~tvv~ayLm~~~g~-s~~~A~~~v~ 144 (294)
T 3nme_A 73 QHIRCEIRD--FDAFDLRMRLPAVVGTLYKAVKRN-GGVTYVHSTAGMGR-APAVALTYMFWVQGY-KLMEAHKLLM 144 (294)
T ss_dssp EEEECCCCT--TCHHHHHHHHHHHHHHHHHHHHHH-CSEEEEECSSSSSH-HHHHHHHHHHHTSCC-CHHHHHHHHH
T ss_pred EEEEEeCCC--CCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEECCCCCch-hHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 788887754 444555 66778888888888542 45899999999999 899999999998664 6778999884
No 28
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=98.54 E-value=2.5e-07 Score=93.20 Aligned_cols=122 Identities=15% Similarity=0.139 Sum_probs=76.4
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEG 94 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~ 94 (1184)
+++.|+++||.-+ +++. .+ ..+|++ ++- -.|+||+++..... .+.....+.+..++|..+.
T Consensus 1 ~~~~I~~~ly~g~--~~~~--------~d----~~~L~~-~gi--~~Vi~l~~~~~~~~-~~~~~~~~i~~~~ip~~d~- 61 (151)
T 2e0t_A 1 HADEVWPGLYLGD--QDMA--------NN----RRELRR-LGI--THVLNASHSRWRGT-PEAYEGLGIRYLGVEAHDS- 61 (151)
T ss_dssp CEEEEETTEEEEC--HHHH--------TC----HHHHHH-HTC--CEEEETTCCTTCCS-CTTHHHHTCEEEECCCCSS-
T ss_pred CccEEeCCeEECC--hhHh--------CC----HHHHHH-cCC--CEEEEccCCcccCC-ccccCCCCeEEEEEecccC-
Confidence 4678999977763 3321 11 345544 333 36999987654211 1111122456677776543
Q ss_pred CCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 95 CPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 95 ~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+...+ +.+..+++-|+..+.. .+.-|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 62 -~~~~l~~~~~~~~~~i~~~~~~-~~~~vlVHC~aG~~R-Sg~~~~ayl~~~~~~-~~~~a~~~v~ 123 (151)
T 2e0t_A 62 -PAFDMSIHFQTAADFIHRALSQ-PGGKILVHCAVGVSR-SATLVLAYLMLYHHL-TLVEAIKKVK 123 (151)
T ss_dssp -TTSCTHHHHHHHHHHHHHHHHS-TTCCEEEECSSSSHH-HHHHHHHHHHHHSCC-CHHHHHHHHH
T ss_pred -CCccHHHHHHHHHHHHHHHHhc-CCCcEEEECCCCCCh-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 32332 4555666666676652 345689999999999 899999999987654 6677998874
No 29
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=98.54 E-value=8.1e-07 Score=92.38 Aligned_cols=119 Identities=13% Similarity=0.049 Sum_probs=77.8
Q ss_pred CCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCC
Q 001026 14 DGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYE 93 (1184)
Q Consensus 14 lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~ 93 (1184)
-++++|+++||.-+ +++.. + ..+|++ ++- =.|.||+++.-.. . ....+.+..++|..+.
T Consensus 6 ~~~~~I~p~LylG~--~~~a~--------d----~~~L~~-~gI--~~Vi~l~~e~p~~-~---~~~~~i~~~~ipi~D~ 64 (177)
T 2oud_A 6 AELTPILPFLFLGN--EQDAQ--------D----LDTMQR-LNI--GYVINVTTHLPLY-H---YEKGLFNYKRLPATDS 64 (177)
T ss_dssp CCCEEEETTEEEEC--TTTTT--------C----HHHHHH-TTE--EEEEECCSSSCCT-T---TTTTCSEEEECCCCCC
T ss_pred CCCeEEECCEEEcC--hhhhc--------C----HHHHHH-CCC--cEEEEecCCCCcc-c---ccCCCceEEEEECCCC
Confidence 46899999999884 65431 1 245543 333 4688998763211 0 1123556777776543
Q ss_pred CCCCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 94 GCPLLT-METVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 94 ~~p~p~-L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
.... .+.+..+++-|+..+.. +..|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 65 --~~~~l~~~~~~~~~~i~~~~~~--~~~VlVHC~aG~~R-Sg~~v~ayLm~~~~~-~~~~A~~~v~ 125 (177)
T 2oud_A 65 --NKQNLRQYFEEAFEFIEEAHQC--GKGLLIHCQAGVSR-SATIVIAYLMKHTRM-TMTDAYKFVK 125 (177)
T ss_dssp --SSCCCHHHHHHHHHHHHHHHHT--TCEEEEECSSSSSH-HHHHHHHHHHHTSCC-CHHHHHHHHH
T ss_pred --CcccHHHHHHHHHHHHHHHHhc--CCcEEEEcCCCCCc-hHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 2233 34555666666666653 45899999999999 899999999986444 6778998874
No 30
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=98.54 E-value=3.2e-07 Score=91.89 Aligned_cols=117 Identities=12% Similarity=0.048 Sum_probs=75.5
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEG 94 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~ 94 (1184)
.++.|+++||.-+ +++. .+ ..+|++ ++- =.|.||+++.... + .-+.+...+|..+..
T Consensus 3 ~~~~I~~~LylG~--~~~a--------~~----~~~L~~-~gI--~~Vl~l~~~~~~~-~-----~~~~~~~~ipi~D~~ 59 (144)
T 3s4e_A 3 QVGVIKPWLLLGS--QDAA--------HD----LDTLKK-NKV--THILNVAYGVENA-F-----LSDFTYKSISILDLP 59 (144)
T ss_dssp CCEEEETTEEEEC--HHHH--------TC----HHHHHH-TTC--CEEEECSSSCCCC-C-----TTTSEEEECCCCCCT
T ss_pred chhEEcCCEEECC--hhHh--------CC----HHHHHH-cCC--CEEEEccCCCCCC-C-----CCCCEEEEEeccCCC
Confidence 4678999988763 3321 11 245555 333 3588998754321 1 113456667665432
Q ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 95 CPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 95 ~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
.. .-++.+..+++-|++++..+ .-|+|||.+|.+| +|+|++|||++...+ +.++|++++.
T Consensus 60 ~~-~~~~~~~~~~~fi~~~~~~~--~~VlVHC~~G~sR-S~~~v~ayLm~~~~~-~~~~A~~~v~ 119 (144)
T 3s4e_A 60 ET-NILSYFPECFEFIEEAKRKD--GVVLVHSNAGVSR-AAAIVIGFLMNSEQT-SFTSAFSLVK 119 (144)
T ss_dssp TS-CGGGGHHHHHHHHHHHHHTT--CCEEEECSSSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred CC-chHHHHHHHHHHHHHHHHcC--CeEEEEcCCCCch-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 21 22345666666677777653 4699999999999 899999999997655 5677999874
No 31
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=98.52 E-value=7.7e-07 Score=90.74 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=76.3
Q ss_pred CCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCC
Q 001026 12 PPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRH 91 (1184)
Q Consensus 12 ~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~ 91 (1184)
...+++.|+++|++-+ +++. .+ ..+|++ ++- =.|.||+++... ..-+....++|..
T Consensus 4 m~~~~~~I~~~lylg~--~~~~--------~d----~~~L~~-~gI--~~Vi~l~~~~~~-------~~~~i~~~~ipi~ 59 (160)
T 1yz4_A 4 MGNGMTKVLPGLYLGN--FIDA--------KD----LDQLGR-NKI--THIISIHESPQP-------LLQDITYLRIPVA 59 (160)
T ss_dssp SCSSSEEEETTEEEEC--TTGG--------GC----HHHHHH-TTC--CEEEEECSSCCC-------CCTTCEEEEECCC
T ss_pred CCCCceEEECCEEECC--hhhh--------cC----HHHHHH-CCC--eEEEEccCCCCC-------ccCCCeEEEEECC
Confidence 4568999999998874 5432 11 345544 333 358899876422 1224466777765
Q ss_pred CCCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 92 YEGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 92 ~~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+.. .+.+ +.+..+++-|+..+.. +.-|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 60 D~~--~~~~~~~~~~~~~~i~~~~~~--~~~VlVHC~aG~~R-Sg~~~~aylm~~~~~-~~~~a~~~v~ 122 (160)
T 1yz4_A 60 DTP--EVPIKKHFKECINFIHCCRLN--GGNCLVHSFAGISR-STTIVTAYVMTVTGL-GWRDVLEAIK 122 (160)
T ss_dssp SCT--TSCGGGGHHHHHHHHHHHHHT--TCCEEEEETTSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred CCC--CccHHHHHHHHHHHHHHHHHc--CCeEEEECCCCCch-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 432 2333 3444555555555553 34699999999999 899999999887544 5677998874
No 32
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=98.49 E-value=8.7e-07 Score=93.13 Aligned_cols=119 Identities=16% Similarity=0.062 Sum_probs=77.7
Q ss_pred CCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCC
Q 001026 13 PDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHY 92 (1184)
Q Consensus 13 ~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~ 92 (1184)
-.+++.|+++|++-+ +++. .+ ..+|++ ++- =.|.|++++.... ..-+.+..++|..+
T Consensus 17 ~~~~~~I~~~LylG~--~~~a--------~d----~~~L~~-~gI--t~Vi~l~~~~~~~------~~~~i~~~~ipi~D 73 (188)
T 2esb_A 17 VSGLSQITKSLYISN--GVAA--------NN----KLMLSS-NQI--TMVINVSVEVVNT------LYEDIQYMQVPVAD 73 (188)
T ss_dssp -CCCEEEETTEEEEC--TTGG--------GC----HHHHHH-TTC--CEEEECCSSCCCC------CCTTCEEEECCCCS
T ss_pred CCCceEEeCCEEEcC--chHh--------cC----HHHHHH-CCC--cEEEEecCCCCCc------CCCCCEEEEEeCcC
Confidence 367999999999884 5431 12 234543 443 3689999875332 12245667777653
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 93 EGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 93 ~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
... ..-++.+..+++-|++++.. +.-|+|||.+|++| +|++++|||++...+ +.++|++++.
T Consensus 74 ~~~-~~~~~~~~~~~~fI~~~~~~--~~~VLVHC~aG~sR-S~~vv~ayLm~~~~~-s~~~A~~~v~ 135 (188)
T 2esb_A 74 SPN-SRLCDFFDPIADHIHSVEMK--QGRTLLHCAAGVSR-SAALCLAYLMKYHAM-SLLDAHTWTK 135 (188)
T ss_dssp CTT-SCGGGGHHHHHHHHHHHHHT--TCCEEEECSSSSSH-HHHHHHHHHHHHSCC-CHHHHHHHHH
T ss_pred CCC-ccHHHHHHHHHHHHHHHHHc--CCEEEEECCCCCch-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 221 12234455555656666653 45799999999999 899999999987654 6778999874
No 33
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=98.45 E-value=9.7e-07 Score=90.45 Aligned_cols=121 Identities=7% Similarity=0.011 Sum_probs=77.0
Q ss_pred cCCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecC
Q 001026 10 RKPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYP 89 (1184)
Q Consensus 10 ~~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P 89 (1184)
..+++.++.|+++||.-+ +++. .+ ..+|++ ++- =.|.|++.+.... + .-+.+...+|
T Consensus 4 ~~p~~~~~~I~~~LylG~--~~~a--------~~----~~~L~~-~gI--t~Vlnl~~~~~~~-~-----~~~~~~~~ip 60 (161)
T 3emu_A 4 TFPTLSPTQIIQYIHLGS--FLNA--------HN----VDYIHN-NNI--SSILLVGIEVPSL-F-----KDQCDILRLD 60 (161)
T ss_dssp CCGGGSCEEEETTEEEEE--TTGG--------GC----HHHHHH-TTE--EEEEEEC-------------CTTSEEEEEC
T ss_pred cCCCCCceEEECCEEECC--hHHh--------hC----HHHHHH-CCC--CEEEEeCCCCccc-c-----CCCCEEEEEe
Confidence 456688999999998875 5532 11 244544 332 4689999763221 1 1134566666
Q ss_pred CCCCCCCCCcHH-HHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 90 RHYEGCPLLTME-TVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 90 ~~~~~~p~p~L~-~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
..| .....+. .+..+++-|++.+..+ .-|+|||.+|.+| +|+|++|||++...+ +.++|++++.
T Consensus 61 i~D--~~~~~l~~~~~~~~~fI~~~~~~~--~~VlVHC~~G~sR-S~~vv~ayLm~~~~~-s~~~A~~~v~ 125 (161)
T 3emu_A 61 IVS--EEGHQLYDSIPNAIKFIIRSIQRK--EGVLIISGTGVNK-APAIVIAFLMYYQRL-SFINAFNKVQ 125 (161)
T ss_dssp CCC--SSTTHHHHHHHHHHHHHHHHHHTT--CEEEEEESSSSSH-HHHHHHHHHHHHTTC-CHHHHHHHHH
T ss_pred CcC--CCCCcHHHHHHHHHHHHHHHHhcC--CeEEEEcCCCCcH-HHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 654 3333333 3556666666666654 5799999999999 899999999987654 5667999874
No 34
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=98.43 E-value=1.3e-06 Score=89.58 Aligned_cols=117 Identities=13% Similarity=0.186 Sum_probs=75.2
Q ss_pred CCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCC
Q 001026 13 PDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHY 92 (1184)
Q Consensus 13 ~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~ 92 (1184)
..+++.|+++|++-+ +++. .+ ..+|++ ++- =.|.||+++... ...+.+..++|..+
T Consensus 4 ~~~~~~I~~~lylG~--~~~~--------~d----~~~L~~-~gI--~~Vi~l~~~~~~-------~~~~i~~~~ip~~D 59 (165)
T 1wrm_A 4 GNGMNKILPGLYIGN--FKDA--------RD----AEQLSK-NKV--THILSVHDSARP-------MLEGVKYLCIPAAD 59 (165)
T ss_dssp CSSCEEEETTEEEEC--TTGG--------GC----HHHHHH-TTE--EEEEECSTTCCC-------CSTTCEEEECCCCS
T ss_pred CCchheEECCEEECC--hhHh--------cC----HHHHHH-CCC--cEEEEecCCCCC-------CCCCCeEEEEECCC
Confidence 457899999998874 5542 11 345543 332 468999876422 12344666777654
Q ss_pred CCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 93 EGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 93 ~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
. +...+ +.+..+++-|+..+. .+.-|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 60 ~--~~~~l~~~~~~~~~fi~~~~~--~~~~VlVHC~aG~~R-Sg~~~~ayLm~~~~~-~~~~A~~~v~ 121 (165)
T 1wrm_A 60 S--PSQNLTRHFKESIKFIHECRL--RGESCLVHCLAGVSR-SVTLVIAYIMTVTDF-GWEDALHTVR 121 (165)
T ss_dssp S--TTSCCGGGHHHHHHHHHHHHH--TTCEEEEECSSSSSH-HHHHHHHHHHHTSSC-CHHHHHHHHH
T ss_pred C--CCccHHHHHHHHHHHHHHHHH--CCCeEEEECCCCCCh-hHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 3 22222 334445555555544 345789999999999 899999999987544 6677998874
No 35
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=98.43 E-value=5.6e-07 Score=96.47 Aligned_cols=116 Identities=15% Similarity=0.096 Sum_probs=76.1
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEG 94 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~ 94 (1184)
....|+++||.-+ ++.. .+ ..+|++ ++- -.|+||+++.... ...+.+..++|+.|..
T Consensus 5 ~p~eI~p~LylG~--~~~a--------~d----~~~L~~-~GI--t~VInl~~e~~~~------~~~gi~y~~ipi~D~~ 61 (211)
T 2g6z_A 5 GPVEILPFLYLGS--AYHA--------SK----CEFLAN-LHI--TALLNVSRRTSEA------CMTHLHYKWIPVEDSH 61 (211)
T ss_dssp CCEEEETTEEEEE--HHHH--------TC----HHHHHH-HTC--CEEEECSSCCCCT------TCTTSEEEECCCCSST
T ss_pred CCeEEECCEEEcC--Cccc--------cC----HHHHHH-CCC--CEEEEcCCCCccc------cccCCEEEEeeCCCCC
Confidence 4678888888763 3220 11 245544 333 3689999875321 1234566777765433
Q ss_pred CCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 95 CPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 95 ~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
.+.+ +.+..+++-|++++.. +..|+|||.+|++| +|+|++|||++...+ +.++|++++.
T Consensus 62 --~~~l~~~~~~~~~fI~~~~~~--~~~VLVHC~aG~sR-Sgtvv~AYLm~~~g~-s~~eAl~~vr 121 (211)
T 2g6z_A 62 --TADISSHFQEAIDFIDCVREK--GGKVLVHSEAGISR-SPTICMAYLMKTKQF-RLKEAFDYIK 121 (211)
T ss_dssp --TSCCGGGHHHHHHHHHHHHHT--TCCEEEEESSSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHhc--CCeEEEECCCCCCc-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 2333 4566666667777753 34789999999999 899999999987655 6778999874
No 36
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=98.42 E-value=1.8e-06 Score=87.72 Aligned_cols=116 Identities=11% Similarity=0.080 Sum_probs=74.6
Q ss_pred ceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccC-CceEEecCCCCCC
Q 001026 16 LLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEY-DMTVMDYPRHYEG 94 (1184)
Q Consensus 16 LtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f-~~~V~~~P~~~~~ 94 (1184)
.+.|+++||+-+ +++. .+ ..+|++ ++- -.|+||+++... . +... +.+...+|+.+
T Consensus 6 p~~I~~~lylg~--~~~~--------~d----~~~L~~-~gI--~~Vi~l~~~~~~-~----~~~~~~i~~~~ipi~D-- 61 (155)
T 2hxp_A 6 PVQILPNLYLGS--ARDS--------AN----LESLAK-LGI--RYILNVTPNLPN-F----FEKNGDFHYKQIPISD-- 61 (155)
T ss_dssp CEEEETTEEEEC--TTGG--------GC----HHHHHH-TTE--EEEEECSSSCCC-T----TTTCTTCEEEECCCCG--
T ss_pred CeEEECCEEECC--hhhh--------cC----HHHHHH-CCC--CEEEEeCCCCcc-c----ccCCCCeEEEEEECcc--
Confidence 468899988874 4431 11 245543 333 468899876422 1 1222 25667777654
Q ss_pred CCCCcHHH-HHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 95 CPLLTMET-VHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 95 ~p~p~L~~-l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
...+.+.. +..+++-|++++.. +.-|+|||.+|++| ||+|++|||++...+ +.++|++++.
T Consensus 62 ~~~~~l~~~~~~~~~fi~~~~~~--~~~VlVHC~~G~~R-S~~vv~ayLm~~~~~-~~~~A~~~v~ 123 (155)
T 2hxp_A 62 HWSQNLSRFFPEAIEFIDEALSQ--NCGVLVHSLAGVSR-SVTVTVAYLMQKLHL-SLNDAYDLVK 123 (155)
T ss_dssp GGGGGHHHHHHHHHHHHHHHHHT--TCEEEEECSSSSSH-HHHHHHHHHHHHHTC-CHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc--CCcEEEECCCCCch-hHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 33345543 44556666666653 35799999999999 899999999986544 6778999874
No 37
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=98.42 E-value=9.1e-07 Score=88.62 Aligned_cols=116 Identities=11% Similarity=-0.011 Sum_probs=71.6
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEG 94 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~ 94 (1184)
+.+.|+++|+.-+ +++. .+ ..+|++ ++- =.|.|++++.... + .-.....++|..+.
T Consensus 3 ~~~~I~~~lylg~--~~~~--------~~----~~~L~~-~gi--~~Vi~l~~~~~~~-~-----~~~~~~~~ipi~D~- 58 (145)
T 2nt2_A 3 SPTQIFEHVFLGS--EWNA--------SN----LEDLQN-RGV--RYILNVTREIDNF-F-----PGVFEYHNIRVYDE- 58 (145)
T ss_dssp CCEEEETTEEEEC--HHHH--------TC----HHHHHH-TTE--EEEEECCSSSCCS-C-----BTTBEEEECCCCSS-
T ss_pred CccEeeCCEEECC--hhHh--------CC----HHHHHH-CCC--CEEEEeCCCCccC-C-----CCCcEEEEEEEeCC-
Confidence 4678888888763 3221 11 244543 332 4689999864321 1 11234555665433
Q ss_pred CCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 95 CPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 95 ~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+...+ +.+.++++-|+.++.. +..|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 59 -~~~~l~~~~~~~~~fi~~~~~~--~~~VlVHC~~G~~R-S~~~v~ayLm~~~~~-~~~~A~~~v~ 119 (145)
T 2nt2_A 59 -EATDLLAYWNDTYKFISKAKKH--GSKCLVHSKMGVSR-SASTVIAYAMKEYGW-NLDRAYDYVK 119 (145)
T ss_dssp -TTCCCGGGHHHHHHHHHHHHHT--TCEEEEECSSSSSH-HHHHHHHHHHHHHCC-CHHHHHHHHH
T ss_pred -CCCcHHHHHHHHHHHHHHHHHc--CCeEEEECCCCCch-HHHHHHHHHHHHhCC-CHHHHHHHHH
Confidence 22222 3334455555555553 35799999999999 899999999987655 7778999874
No 38
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=98.40 E-value=6.4e-07 Score=92.92 Aligned_cols=120 Identities=10% Similarity=0.072 Sum_probs=77.0
Q ss_pred CCCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCC
Q 001026 11 KPPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPR 90 (1184)
Q Consensus 11 ~~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~ 90 (1184)
....+++.|+++||+-+ ++. .... .+++-.--.|+||+++.... ...+.+..++|.
T Consensus 27 ~~~~~~~~I~~~lylg~--~~~--------------a~~~--~~~gI~~~~Ii~l~~~~~~~------~~~~~~~~~~p~ 82 (176)
T 3cm3_A 27 KSPTIMTRVTNNVYLGN--YKN--------------AMDA--PSSEVKFKYVLNLTMDKYTL------PNSNINIIHIPL 82 (176)
T ss_dssp CCCCSCEECSSSEEEEC--HHH--------------HHTG--GGSSSCCSEEEECSSSCCCC------TTSCCEEEECCC
T ss_pred cCCCCceEEeCCEEEcC--HHH--------------hhCH--HHcCCCCCEEEEecCCCCCc------CCCCCEEEEEEC
Confidence 34467888999988773 322 0111 33432003799999875432 124556777876
Q ss_pred CCCCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCC----cHHHHHHHHh
Q 001026 91 HYEGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFT----GEQKTLDMIY 159 (1184)
Q Consensus 91 ~~~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~----~~~~aL~~~~ 159 (1184)
.+ ++...+ +.+..+++-|+.++.. +.-|+|||.+|.+| ||++++|||++...+. +.++|++++.
T Consensus 83 ~d--~~~~~l~~~~~~~~~~i~~~~~~--~~~VlVHC~aG~~R-Sg~~v~aylm~~~~~~~~~v~~~~A~~~vr 151 (176)
T 3cm3_A 83 VD--DTTTDISKYFDDVTAFLSKCDQR--NEPVLVHSAAGVNR-SGAMILAYLMSKNKESLPMLYFLYVYHSMR 151 (176)
T ss_dssp CC--SSSCCCGGGHHHHHHHHHHHHHH--TCCEEEECSSSSSH-HHHHHHHHHHHHCCSSCHHHHHHHHHHHHH
T ss_pred CC--CCcccHHHHHHHHHHHHHHHHHC--CCcEEEECCcCCCH-HHHHHHHHHHHHhCCCCccccHHHHHHHHH
Confidence 53 333332 2344555556666654 34699999999999 8999999999987665 2677888874
No 39
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=98.33 E-value=1.3e-06 Score=92.32 Aligned_cols=119 Identities=10% Similarity=0.084 Sum_probs=76.3
Q ss_pred CCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCC
Q 001026 12 PPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRH 91 (1184)
Q Consensus 12 ~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~ 91 (1184)
...++++|+++||.-+ ++. .... .+++-..-.|+||+++.... ...+.+...+|..
T Consensus 45 ~~~~~~~I~~~Lylg~--~~~--------------~~~~--~~~gI~~~~Vi~l~~~~~~~------~~~~~~~~~~p~~ 100 (195)
T 2q05_A 45 SPTIMTRVTNNVYLGN--YKN--------------AMDA--PSSEVKFKYVLNLTMDKYTL------PNSNINIIHIPLV 100 (195)
T ss_dssp BCCSCEECSSSEEEEC--HHH--------------HHHS--TTSSSCCSEEEECSSSCCCC------TTCCCEEEECCCC
T ss_pred CCCCCeEEeCCEEECc--hhh--------------hhCH--HhCCCCCCEEEEECCCCCCc------ccCCcEEEEEEcC
Confidence 4467888888888763 332 1111 33432014799999875331 2345667778765
Q ss_pred CCCCCCCc-HHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCC----cHHHHHHHHh
Q 001026 92 YEGCPLLT-METVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFT----GEQKTLDMIY 159 (1184)
Q Consensus 92 ~~~~p~p~-L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~----~~~~aL~~~~ 159 (1184)
+ .+... .+.+..+++-|+.++..+ .-|+|||.+|++| ||+++||||++...+. +.++|++++.
T Consensus 101 d--~~~~~l~~~~~~~~~~i~~~~~~~--~~VlVHC~aG~~R-Sg~~v~~yL~~~~~~~~~~v~~~~A~~~vr 168 (195)
T 2q05_A 101 D--DTTTDISKYFDDVTAFLSKCDQRN--EPVLVHCAAGVNR-SGAMILAYLMSKNKESLPMLYFLYVYHSMR 168 (195)
T ss_dssp C--SSSCCCGGGHHHHHHHHHHHHHTT--CCEEEECSSSSSH-HHHHHHHHHHHHCCSSCHHHHHHHHHHHHH
T ss_pred C--CCcccHHHHHHHHHHHHHHHHHcC--CcEEEEcCCCCCh-HHHHHHHHHHHHhCCCccccCHHHHHHHHH
Confidence 3 33333 334455666666666543 4599999999999 9999999999976555 2677888773
No 40
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=98.32 E-value=1.6e-06 Score=92.45 Aligned_cols=124 Identities=17% Similarity=0.193 Sum_probs=75.4
Q ss_pred CCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccc-cccccCCceEEecCCCC
Q 001026 14 DGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIG-QVLSEYDMTVMDYPRHY 92 (1184)
Q Consensus 14 lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~-~~~~~f~~~V~~~P~~~ 92 (1184)
..++.|+++||+-+ +++. .+ ..+|++ ++- -.|.|++++.+..+.. ..+...+.+...+|..+
T Consensus 44 ~~~~~I~p~LylG~--~~~a--------~d----~~~L~~-~gI--t~Vinl~~~~~~~~~~~~~~~~~~i~y~~ipi~D 106 (205)
T 2pq5_A 44 NHIDEVWPSLFLGD--AYAA--------RD----KSKLIQ-LGI--THVVNAAAGKFQVDTGAKFYRGMSLEYYGIEADD 106 (205)
T ss_dssp ESEEEEETTEEEEC--HHHH--------HC----HHHHHH-HTC--CEEEETBCSTTSCCCHHHHTTTSSCEEEECBCCC
T ss_pred CCceEEECCEEECC--hhHh--------cC----HHHHHH-cCC--eEEEEeCCCcccCCcchhhhccCCceEEeeecCC
Confidence 46888999988773 3321 11 245544 333 4688999865432110 11112244666676654
Q ss_pred CCCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 93 EGCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 93 ~~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
.+...+ ..+..+++-|+.+++. .+..|+|||.+|++| +|+|++|||++...+ +.++|++++.
T Consensus 107 --~p~~dl~~~f~~~~~fI~~~l~~-~~~~VLVHC~aG~sR-S~tvv~aYLm~~~~~-s~~~A~~~vr 169 (205)
T 2pq5_A 107 --NPFFDLSVYFLPVARYIRAALSV-PQGRVLVHCAMGVSR-SATLVLAFLMIYENM-TLVEAIQTVQ 169 (205)
T ss_dssp --CTTSCGGGGHHHHHHHHHHHHTS-TTCCEEEECSSSSSH-HHHHHHHHHHHHSCC-CHHHHHHHHT
T ss_pred --CCcchHHHHHHHHHHHHHHHHhc-CCCeEEEECCCCCcH-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 222222 2233445556666642 344689999999999 899999999987655 7778999873
No 41
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=98.23 E-value=6.7e-06 Score=82.96 Aligned_cols=124 Identities=10% Similarity=0.068 Sum_probs=72.2
Q ss_pred CCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCC
Q 001026 14 DGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYE 93 (1184)
Q Consensus 14 lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~ 93 (1184)
-+++.|+++||+-+ +++. . . ++ ..+|++ ++- =.|.||+++.........+ .-+.+...+|..+.
T Consensus 4 ~~~~~I~~~lylG~--~~~~-~-----~---~d-~~~L~~-~gI--~~Vi~l~~~~e~~~~~~~~-~~~~~~~~ip~~d~ 67 (154)
T 2r0b_A 4 REMQEILPGLFLGP--YSSA-M-----K---SK-LPVLQK-HGI--THIICIRQNIEANFIKPNF-QQLFRYLVLDIADN 67 (154)
T ss_dssp CSCEEEETTEEEEC--GGGG-S-----G---GG-HHHHHH-TTC--CEEEEEECGGGTTTSSCCC-TTTSEEEEEECCSS
T ss_pred cchheEeCCeEECC--HHHh-h-----h---cc-HHHHHH-cCC--eEEEEeCCccccccCCCCC-cCceeEEEEECCCC
Confidence 46899999988763 4321 0 1 12 245544 443 3577998653221000000 11345556665543
Q ss_pred CCCCCcH-HHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 94 GCPLLTM-ETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 94 ~~p~p~L-~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
. ...+ +.+..+++-|+.++.. +.-|+|||.+|++| ||++++|||++...+ +.++|++++.
T Consensus 68 ~--~~~l~~~~~~~~~~i~~~~~~--~~~vlvHC~aG~~R-S~~~~~ayl~~~~~~-~~~~a~~~v~ 128 (154)
T 2r0b_A 68 P--VENIIRFFPMTKEFIDGSLQM--GGKVLVHGNAGISR-SAAFVIAYIMETFGM-KYRDAFAYVQ 128 (154)
T ss_dssp T--TSCCGGGHHHHHHHHHHHHHT--TCCEEEECSSSSSH-HHHHHHHHHHHHHTC-CHHHHHHHHH
T ss_pred C--cccHHHHHHHHHHHHHHHHhc--CCCEEEEcCCCCCh-HHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 2 2222 3334445555555553 34689999999999 899999999985443 6778998874
No 42
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=98.20 E-value=2.9e-06 Score=88.89 Aligned_cols=87 Identities=11% Similarity=0.112 Sum_probs=60.5
Q ss_pred EEEEeccCCcCcccccccccC-CceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHH
Q 001026 61 MVFNFREGEHQSQIGQVLSEY-DMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLA 139 (1184)
Q Consensus 61 ~V~Nl~ee~~~~~~~~~~~~f-~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia 139 (1184)
.|.|++++..... ..+ +..+.++|+.+ . .+-++.+..+++-|++++..+ ..|+|||.+|.+| +|++++
T Consensus 68 ~Vlnv~~e~~~~~-----~~~~~i~y~~ip~~d--~-~~i~~~~~~~~~fI~~~~~~g--~~VLVHC~~G~sR-S~tvv~ 136 (182)
T 2j16_A 68 VVINVAEEANDLR-----MQVPAVEYHHYRWEH--D-SQIALDLPSLTSIIHAATTKR--EKILIHAQCGLSR-SATLII 136 (182)
T ss_dssp EEEECCSCC-------------CCEEEECCCSS--G-GGGGGGHHHHHHHHHHHHHTT--CCEEEEESSCCSH-HHHHHH
T ss_pred EEEEecCCCCCch-----hccCCceEEEEecCC--C-chHHHHHHHHHHHHHHHHhcC--CeEEEECCCCCCh-HHHHHH
Confidence 5999998754321 112 45667777643 2 234456667777777777643 4799999999999 899999
Q ss_pred HHHHHhhCCCcHHHHHHHHh
Q 001026 140 ALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 140 ~yLly~~~~~~~~~aL~~~~ 159 (1184)
|||++...+ +.++|++++.
T Consensus 137 ayLm~~~~~-s~~~A~~~v~ 155 (182)
T 2j16_A 137 AYIMKYHNL-SLRHSYDLLK 155 (182)
T ss_dssp HHHHHHTTC-CHHHHHHHHH
T ss_pred HHHHHHcCC-CHHHHHHHHH
Confidence 999987554 6778999884
No 43
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A
Probab=97.68 E-value=3.4e-05 Score=86.66 Aligned_cols=56 Identities=14% Similarity=0.249 Sum_probs=45.2
Q ss_pred CCCCCCCC-cHHHHHHHHHHHHHHHhcC-CCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 91 HYEGCPLL-TMETVHHFLRSSESWLSLG-HQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 91 ~~~~~p~p-~L~~l~~~c~~i~~WL~~d-~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
+|.|+-+| ..+.|++|++.+.+|+... ...-+||||.+|.|| ||++||++++..++
T Consensus 188 ~WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiai~~~l~~l 245 (291)
T 2hc1_A 188 VWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSAGVGR-TGTFIALDRILQQL 245 (291)
T ss_dssp CCCSSSCCSCHHHHHHHHHHHHHHHHHSSCCCCEEEECSSSSHH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCch-hHHHHHHHHHHHHH
Confidence 34555456 5789999999999998653 346799999999999 99999999888653
No 44
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=97.65 E-value=0.00021 Score=72.54 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=70.5
Q ss_pred CCCCceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCc-c--c---ccccccCCce-
Q 001026 12 PPDGLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQS-Q--I---GQVLSEYDMT- 84 (1184)
Q Consensus 12 ~~lDLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~-~--~---~~~~~~f~~~- 84 (1184)
...++..|+++|+..+ .++. ++ ..+|.+ ++- -.|.||++..... . . .+.....+..
T Consensus 13 ~~~n~~~v~~~l~rs~--~~~~-----------~d-~~~L~~-~Gi--~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~ 75 (156)
T 2f46_A 13 NKMAILKLDEHLYISP--QLTK-----------AD-AEQIAQ-LGI--KTIICNRPDREEESQPDFAQIKQWLEQAGVTG 75 (156)
T ss_dssp --CCCEEEETTEEEES--CCCG-----------GG-HHHHHH-HTC--CEEEECSCTTSSTTCCCHHHHHHHHGGGTCCE
T ss_pred CCcCceeccCCEEEcC--CCCH-----------HH-HHHHHH-CCC--CEEEECCCCccccCCCcHHHHHHHHHHCCCHh
Confidence 3468999999999884 4431 22 334544 333 3588998432211 0 0 0011223456
Q ss_pred EEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 85 VMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 85 V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
+.++|..+. .+..+.+..|.+ +|.. .+.-|+|||.+|+ | +++++++||+..| .+.+++++.+.
T Consensus 76 ~~~iPv~~~---~~~~~~~~~~~~----~l~~-~~~pVlvHC~sG~-R-s~~l~al~l~~~g--~~~~~a~~~~~ 138 (156)
T 2f46_A 76 FHHQPVTAR---DIQKHDVETFRQ----LIGQ-AEYPVLAYCRTGT-R-CSLLWGFRRAAEG--MPVDEIIRRAQ 138 (156)
T ss_dssp EEECCCCTT---TCCHHHHHHHHH----HHHT-SCSSEEEECSSSH-H-HHHHHHHHHHHTT--CCHHHHHHHHH
T ss_pred heECccCCC---CCCHHHHHHHHH----HHHh-CCCCEEEECCCCC-C-HHHHHHHHHHHcC--CCHHHHHHHHH
Confidence 788887543 345555555444 4443 2446899999999 8 6788888887644 36777888773
No 45
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Probab=97.64 E-value=2e-05 Score=86.75 Aligned_cols=55 Identities=7% Similarity=0.120 Sum_probs=43.5
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-.| ..+.+++|++.+..|.......-+||||.+|.|| ||++||++++..++
T Consensus 148 Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~pivVHCsaGvGR-TGtfia~~~~~~~l 203 (253)
T 1p15_A 148 WPEVGIPSDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGR-TGTFCALSTVLERV 203 (253)
T ss_dssp SCSSSCCSSSCSHHHHHHHHHHHTTTTTSCCEEEESSSSSHH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhhccCCCCEEEEcCCCCch-hHHHHHHHHHHHHH
Confidence 4444344 4467889999999986656667899999999999 99999999888653
No 46
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S
Probab=97.64 E-value=5.1e-05 Score=88.41 Aligned_cols=72 Identities=14% Similarity=0.196 Sum_probs=52.9
Q ss_pred EEecCCCCCCCCCC-cHHHHHHHHHHHHHHHhcC-------CCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHH
Q 001026 85 VMDYPRHYEGCPLL-TMETVHHFLRSSESWLSLG-------HQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLD 156 (1184)
Q Consensus 85 V~~~P~~~~~~p~p-~L~~l~~~c~~i~~WL~~d-------~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~ 156 (1184)
.++|. +|.|+-+| ..+.++.|++.+..|.... ..+-+||||.+|.|| ||++||++++..+...+..+++.
T Consensus 273 h~~y~-~WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~PivVHCsAGvGR-TGtfiaidll~~~~~vdv~~~v~ 350 (383)
T 1g4w_R 273 VLHVK-NWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLGGVGR-TGTMAAALVLKDNPHSNLEQVRA 350 (383)
T ss_dssp EEEEC-SCCTTSCCSSHHHHHHHHHHHHTSCCCCCTTCSCTTSSCCEEESSSSSHH-HHHHHHHHHHHHCTTCCHHHHHH
T ss_pred EEeeC-CcCCcCCCCCHHHHHHHHHHHHHHHhhhccccccCCCCCEEEEeCcCCcH-HHHHHHHHHHHhCCCCCHHHHHH
Confidence 33442 35555555 5778999999998886432 234578999999999 99999999998776666677776
Q ss_pred HH
Q 001026 157 MI 158 (1184)
Q Consensus 157 ~~ 158 (1184)
.+
T Consensus 351 ~l 352 (383)
T 1g4w_R 351 DF 352 (383)
T ss_dssp HH
T ss_pred HH
Confidence 55
No 47
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A
Probab=97.57 E-value=0.00011 Score=82.28 Aligned_cols=61 Identities=11% Similarity=0.161 Sum_probs=44.6
Q ss_pred EEecCC-CCCCCCCCc-HHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 85 VMDYPR-HYEGCPLLT-METVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 85 V~~~P~-~~~~~p~p~-L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.+|=+ +|.|+-+|. ...++.|++.+..+... ....-+||||.+|.|| ||++||+++++..
T Consensus 167 V~h~~~~~WpD~~vP~~~~~~l~~~~~v~~~~~~~~~~~pivVHCsaGvGR-TGtfia~~~~l~~ 230 (284)
T 1fpr_A 167 IWHYQYLSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGR-TGTIIVIDMLMEN 230 (284)
T ss_dssp EEECCBCCSCTTSCCSCSHHHHHHHHHHHHHHTTSTTCCCEEEESSBSSHH-HHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEcCCCCcH-HHHHHHHHHHHHH
Confidence 455511 344444554 57888999999888754 2446799999999999 9999999877643
No 48
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Probab=97.55 E-value=6.8e-05 Score=84.28 Aligned_cols=70 Identities=16% Similarity=0.105 Sum_probs=49.5
Q ss_pred ceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHH
Q 001026 83 MTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMI 158 (1184)
Q Consensus 83 ~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~ 158 (1184)
.+..+.|+.|+ -+|..+.+..|+.-+.. |. .+..++|||++|.|| |||++|||+|....-.+.++++..+
T Consensus 182 l~Y~rlPi~D~--~aP~~e~id~fl~~v~~-l~--~~~~i~vHC~aG~GR-Tgt~ma~y~ll~~~~vs~eeii~r~ 251 (314)
T 3mmj_A 182 MRYFRIAATDH--VWPTPENIDRFLAFYRT-LP--QDAWLHFHSEAGVGR-TTAFMVMTDMLKNPSVSLKDILYRQ 251 (314)
T ss_dssp CEEEEEEECTT--SCCCHHHHHHHHHHHHT-CC--TTCEEEEECSSSSHH-HHHHHHHHHHHHCTTSCHHHHHHHH
T ss_pred CEEEEeCcCCC--CCCCHHHHHHHHHHHHH-cC--CCCCEEEECCCCCch-HHHHHHHHHHHHCCCCCHHHHHHHH
Confidence 34445555444 36777888888775555 43 335899999999999 9999999977665555677777654
No 49
>4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi}
Probab=97.42 E-value=0.00014 Score=82.12 Aligned_cols=52 Identities=10% Similarity=0.160 Sum_probs=41.3
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++..| ....++.|++.+..+. ...-+||||.+|.|| ||++||++++...+
T Consensus 194 Wpd~gvP~~~~~~l~~~~~v~~~~---~~~PivVHCsaGvGR-TGtfiai~~~~~~l 246 (302)
T 4az1_A 194 WPDHGIPQSATSLEALLTNVKNSP---TTVPVVVHCSAGIGR-TGTLIGAYAALTHL 246 (302)
T ss_dssp SCTTSCCSCHHHHHHHHHHHHHSC---TTSCEEEESSSSSSH-HHHHHHHHHHHHHH
T ss_pred CCcCCccCCHHHHHHHHHHHHHhC---CCCCEEEECCCCCcH-HHHHHHHHHHHHHH
Confidence 4444456 5888899999888754 345699999999999 99999999888764
No 50
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens}
Probab=97.42 E-value=0.00026 Score=80.48 Aligned_cols=65 Identities=8% Similarity=0.075 Sum_probs=45.2
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC----CCcHHHHHHHH
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ----FTGEQKTLDMI 158 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~----~~~~~~aL~~~ 158 (1184)
|.++-.| ..+.+++|++.+..+.. +...-+||||.+|.|| ||++||+.+++..+ ..+..+++..+
T Consensus 210 WPD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiaid~~l~~l~~~~~v~~~~~v~~l 279 (320)
T 2i75_A 210 WPDHGVPDDSSDFLDFVCHVRNKRA-GKEEPVVVHCSAGIGR-TGVLITMETAMCLIECNQPVYPLDIVRTM 279 (320)
T ss_dssp CCSSSSCSCTHHHHHHHHHHHHHHT-TCCSCEEEECSSSSSH-HHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHhc-cCCCCEEEEcCCCCcH-HHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4444455 46789999999988754 3445799999999999 99999986554332 22344555544
No 51
>4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A*
Probab=97.36 E-value=0.00017 Score=80.83 Aligned_cols=55 Identities=11% Similarity=0.108 Sum_probs=43.1
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-.| ....++.|++.+..+... ....-+||||.+|.|| ||++||++++...+
T Consensus 177 Wpd~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 233 (288)
T 4grz_A 177 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGR-TGTIIVIDMLMENI 233 (288)
T ss_dssp CCTTSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHH-HHHHHHHHHHHHHH
T ss_pred cCcCCcccChHHHHHHHHHHHHHHhhcCCCCcEEEEeCCCCcH-HHHHHHHHHHHHHH
Confidence 4444455 567888999999888765 3456799999999999 99999999877543
No 52
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Probab=97.35 E-value=0.00012 Score=82.33 Aligned_cols=55 Identities=9% Similarity=0.108 Sum_probs=42.2
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.|+-.| ....+++|++.++.+... ....-+||||.+|.|| ||++||++++...+
T Consensus 193 WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfia~~~~~~~l 249 (297)
T 1jln_A 193 WPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGR-TGCFIATSIGCQQL 249 (297)
T ss_dssp SCTTSSCSCSHHHHHHHHHHHHHHHTCTTSCCEEEESSSSSHH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCchh-hHHHHHHHHHHHHH
Confidence 4444455 357788999999887654 3456799999999999 99999998876543
No 53
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=97.33 E-value=0.00026 Score=85.86 Aligned_cols=69 Identities=10% Similarity=0.112 Sum_probs=51.4
Q ss_pred eEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHH
Q 001026 84 TVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMI 158 (1184)
Q Consensus 84 ~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~ 158 (1184)
...++|+.| +.+|..+.|..|+.-|.+ |..+ -.++|||++|.|| |||+++||+|....-.+.++++...
T Consensus 500 ~Y~Ripi~D--~~aP~~e~id~fl~~v~~-lp~~--~~v~vHC~aG~GR-TtT~mv~y~m~k~~~~s~~dii~rq 568 (629)
T 3f41_A 500 HYYRIAATD--HIWPSAANIDEFINFTRT-MPAN--AWLHFHCQAGAGR-TTAYMAMYDMMKNPDVSLGDILSRQ 568 (629)
T ss_dssp EEEEEEECT--TSCCCHHHHHHHHHHHHH-SCTT--CEEEEECSSSSHH-HHHHHHHHHHHHCTTSCHHHHHHHH
T ss_pred EEEEeCCCC--CCCCCHHHHHHHHHHHHh-cCCC--CCEEEeCCCCCch-HHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 344445543 346788888888887766 5433 5799999999999 9999999988876556777787654
No 54
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=97.33 E-value=0.00015 Score=81.82 Aligned_cols=53 Identities=9% Similarity=0.174 Sum_probs=40.2
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHH----HHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAAL----LIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~y----Lly~~ 146 (1184)
|.++-.| ..+.++.|++.+..|.. +...-+||||.+|.|| ||++||++ ++..+
T Consensus 199 WpD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiaid~~~~~ll~~ 256 (303)
T 2oc3_A 199 WPDRGVPSSPDHMLAMVEEARRLQG-SGPEPLCVHCSAGCGR-TGVLCTVDYVRQLLLTQ 256 (303)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHHHC-SSCCCEEEECSSSSHH-HHHHHHHHHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhc-CCCCcEEEEECCCCcc-eeEEEeHHHHHHHHHhc
Confidence 4444445 46788999999988754 3345689999999999 99999998 55544
No 55
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2
Probab=97.31 E-value=0.00014 Score=82.56 Aligned_cols=51 Identities=8% Similarity=0.125 Sum_probs=39.0
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.++-.| ..+.++.|++.++.+. ...-+||||.+|.|| ||++||++++...
T Consensus 214 WPD~gvP~~~~~ll~~i~~v~~~~---~~~PivVHCsaGvGR-TGtfiaid~~l~~ 265 (315)
T 1wch_A 214 WPDHDTPSQPDDLLTFISYMRHIH---RSGPIITHCSAGIGR-SGTLICIDVVLGL 265 (315)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHC---CSSCEEEECSSSSHH-HHHHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHHhhC---CCCCEEEEcCCCCcH-HHHHHHHHHHHHH
Confidence 4444455 4678889998887653 345699999999999 9999999887654
No 56
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A*
Probab=97.28 E-value=0.00017 Score=81.78 Aligned_cols=55 Identities=11% Similarity=0.105 Sum_probs=42.3
Q ss_pred CCCCCCCCc-HHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 91 HYEGCPLLT-METVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 91 ~~~~~p~p~-L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
.|.|+-+|. -+.++.|++.+..|... ....-+||||.+|.|| ||++||++++...
T Consensus 209 ~WpD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~ 265 (316)
T 3b7o_A 209 TWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGR-TGTFIVIDILIDI 265 (316)
T ss_dssp CCCSSSCCSSSHHHHHHHHHHHHHHHTSTTCCCEEEEESSSSHH-HHHHHHHHHHHHH
T ss_pred CcccCCCCCChHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCcH-HHHHHHHHHHHHH
Confidence 344444554 37788999999888754 3456799999999999 9999999877653
No 57
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Probab=97.27 E-value=0.00025 Score=86.03 Aligned_cols=72 Identities=14% Similarity=0.067 Sum_probs=51.8
Q ss_pred cCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC-CCcHHHHHHH
Q 001026 80 EYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ-FTGEQKTLDM 157 (1184)
Q Consensus 80 ~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~-~~~~~~aL~~ 157 (1184)
.++....++|+.|+ -+|..+.|..|++-|.. |.. +..++|||++|.|| |||++|||+|+.+. -.+.++++..
T Consensus 198 ~~Gl~Y~Ripi~D~--~~P~~e~id~fl~~v~~-l~~--~~~i~vHC~AG~GR-TgT~m~~y~m~k~~~~~s~~diI~R 270 (629)
T 3f41_A 198 QHGANYFRLTLQDH--FRPDDPDVDKFLEFYKS-LPK--DAWLHYHCYAGMGR-TTIFMVMHDILKNAKDVSFDDIIQR 270 (629)
T ss_dssp TTTCEEEEEEECTT--SCCCHHHHHHHHHHHHT-SCT--TCEEEEECSSSSHH-HHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred hCCCeEEEccCCCC--CCCCHHHHHHHHHHHHh-cCC--CCCEEEECCCCCCH-HHHHHHHHHHHhccCCCCHHHHHHH
Confidence 34555666666544 46777888888776665 543 36899999999999 99999999888763 3455566654
No 58
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2
Probab=97.24 E-value=0.00018 Score=81.24 Aligned_cols=54 Identities=11% Similarity=0.138 Sum_probs=40.8
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.|+-.| ....+++|++.+..|.. ....-+||||.+|.|| ||++||++++...+
T Consensus 198 WpD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 252 (302)
T 1yfo_A 198 WPDFGVPFTPIGMLKFLKKVKACNP-QYAGAIVVHCSAGVGR-TGTFVVIDAMLDMM 252 (302)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHHSC-TTSCCEEEECSSSSHH-HHHHHHHHHHHHHH
T ss_pred cCCCCcCCCHHHHHHHHHHHHHhcc-CCCCCEEEECCCCCcH-HHHHHHHHHHHHHH
Confidence 4444455 34678899999988743 3346799999999999 99999998876543
No 59
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens}
Probab=97.23 E-value=0.00016 Score=81.03 Aligned_cols=64 Identities=9% Similarity=0.034 Sum_probs=44.9
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC----CCcHHHHHHHH
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ----FTGEQKTLDMI 158 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~----~~~~~~aL~~~ 158 (1184)
|.|+-.| ..+.+++|++.+..+... +.-+||||.+|.|| ||++||++++...+ ..+..+++..+
T Consensus 183 WpD~gvP~~~~~~l~~i~~v~~~~~~--~~PivVHCsaGvGR-TGtfia~d~~~~~l~~~~~v~~~~~v~~l 251 (287)
T 2b49_A 183 WPDHGVPDDSSDFLEFVNYVRSLRVD--SEPVLVHCSAGIGR-TGVLVTMETAMCLTERNLPIYPLDIVRKM 251 (287)
T ss_dssp SCSSSCCSSCHHHHHHHHHHHHHCCT--TCCEEEECSSSSHH-HHHHHHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhccC--CCcEEEEcCCCCcH-HHHHHHHHHHHHHHHcCCCCCHHHHHHHH
Confidence 4444455 467889999999887643 45799999999999 99999987655432 23344555443
No 60
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Probab=97.22 E-value=0.00017 Score=81.58 Aligned_cols=59 Identities=12% Similarity=0.161 Sum_probs=42.9
Q ss_pred EEecC-CCCCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 85 VMDYP-RHYEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 85 V~~~P-~~~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.+|= .+|.++-.| ....++.|++.+..+ ..+.-+||||.+|.|| ||++||++++...+
T Consensus 189 V~h~~y~~WpD~gvP~~~~~~l~~~~~v~~~---~~~~PivVHCsaGvGR-TGtfiai~~~l~~l 249 (306)
T 3m4u_A 189 VLQVQYVGWPDHGVPESAASFDELLSVIKNC---VTTSPILVHCSAGIGR-TGTLIGAYAALLHI 249 (306)
T ss_dssp EEEEEECSCCTTSCCSCHHHHHHHHHHHHTC---CCSSCEEEECSSSSHH-HHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHHHHhh---CCCCCEEEEcCCCCcc-hheeehHHHHHHHH
Confidence 55541 134444456 678888999888775 3345699999999999 99999999887543
No 61
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A
Probab=97.22 E-value=0.00014 Score=82.35 Aligned_cols=55 Identities=11% Similarity=0.165 Sum_probs=42.1
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.|+-.| ....+++|++.++.+... +...-+||||.+|.|| ||++||++++...+
T Consensus 204 WpD~gvP~~~~~ll~~i~~v~~~~~~~~~~~PIvVHCsaGvGR-TGtfiai~~~l~~l 260 (309)
T 1zc0_A 204 WPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVVHCSAGIGR-TGCFIATRIGCQQL 260 (309)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHTSCCCCSSCCCEEEEESSSSHH-HHHHHHHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEeCCCcch-hHHHHHHHHHHHHH
Confidence 4444455 478899999988875432 3346799999999999 99999999887543
No 62
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens}
Probab=97.19 E-value=0.00028 Score=80.35 Aligned_cols=55 Identities=11% Similarity=0.152 Sum_probs=40.7
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHh---------cCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLS---------LGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~---------~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-.| ....++.|++.|..+-. .+...-+||||.+|.|| ||++||+.++...+
T Consensus 215 WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 279 (325)
T 2bzl_A 215 WPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGR-TGVLILSELMIYCL 279 (325)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHHHTGGGTTSCCCCCCEEEESSSSSHH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHhhcccccccCCCCCEEEEeCCCCcH-HHHHHHHHHHHHHH
Confidence 4443344 56778888888766542 23456799999999999 99999999887653
No 63
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Probab=97.18 E-value=0.00015 Score=81.74 Aligned_cols=53 Identities=11% Similarity=0.248 Sum_probs=40.0
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.++-.| ....|++|++.+..+.. +...-+||||.+|.|| ||++||+.++...
T Consensus 197 WPD~gvP~~~~~ll~~~~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiaid~~l~~ 250 (301)
T 2i1y_A 197 WPAEGTPASTRPLLDFRRKVNKCYR-GRSCPIIVHCSDGAGR-TGTYILIDMVLNR 250 (301)
T ss_dssp CCSSSBCSCSHHHHHHHHHHHHSCC-CSSCCEEEECSSSSHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhC-CCCCCEEEEECCCCch-hHHHHHHHHHHHH
Confidence 4443344 45778899998887653 3445799999999999 9999999877654
No 64
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A
Probab=97.18 E-value=0.0002 Score=80.50 Aligned_cols=54 Identities=13% Similarity=0.228 Sum_probs=40.0
Q ss_pred CCCCCCCCc---HHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 91 HYEGCPLLT---METVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 91 ~~~~~p~p~---L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
+|.|+-.|. .+.+++|++.+..+... ...-+||||.+|.|| |||+||+.++...
T Consensus 186 ~WPD~gvP~~~~~~~~l~~i~~v~~~~~~-~~~PivVHCsaGvGR-TGtfiaid~ll~~ 242 (295)
T 2gjt_A 186 AWPDHGVPTANAAESILQFVHMVRQQATK-SKGPMIIHCSAGVGR-TGTFIALDRLLQH 242 (295)
T ss_dssp CCCCSSSCCHHHHHHHHHHHHHHHHHHHH-CCSCEEEESSSSSHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccHHHHHHHHHHHHHhhcc-CCCcEEEEECCCCcc-chHHHHHHHHHHH
Confidence 455555676 46788999888876543 345689999999999 9999998555443
No 65
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ...
Probab=97.14 E-value=0.0005 Score=77.58 Aligned_cols=50 Identities=16% Similarity=0.116 Sum_probs=37.8
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHH
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALL 142 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yL 142 (1184)
|.++-+| ....++.|++.+..+-.. ....-+||||.+|.|| |||+||++.
T Consensus 185 WpD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~ 236 (304)
T 2cm2_A 185 WPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGR-SGTFCLADT 236 (304)
T ss_dssp CCSSSCCSSSHHHHHHHHHHHHHTTTSTTSBCEEEESSSSSSH-HHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCcCCch-hhHHHHHHH
Confidence 4444455 467888999988887433 3456799999999999 999998753
No 66
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A
Probab=97.12 E-value=0.00032 Score=78.54 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=40.1
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.|+-+| ....+++|++.+..+.. ....-+||||.+|.|| ||++||++++...
T Consensus 185 WpD~gvP~~~~~ll~~i~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiai~~~l~~ 238 (286)
T 2ooq_A 185 WPDHGVPCYATGLLGFVRQVKFLNP-PEAGPIVVHCSAGAGR-TGCFIAIDTMLDM 238 (286)
T ss_dssp CCTTCCCSCSHHHHHHHHHHHHHSC-TTSCCEEEECSSSSHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcC-CCCCcEEEEeCCCCcH-HHHHHHHHHHHHH
Confidence 4444455 35678899999888653 2345689999999999 9999999887754
No 67
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2
Probab=97.11 E-value=0.00036 Score=79.12 Aligned_cols=66 Identities=12% Similarity=0.015 Sum_probs=45.8
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhhCC----CcHHHHHHHH
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRKQF----TGEQKTLDMI 158 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~----~~~~~aL~~~ 158 (1184)
|.|+-+| ..+.++.|++.+..+-.. ....-+||||.+|.|| ||++||+++++..+- .+..+++..+
T Consensus 180 WpD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l~~~~~vdv~~~v~~l 251 (314)
T 1l8k_A 180 WPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGR-SGTFSLVDTCLVLMEKGDDINIKQVLLNM 251 (314)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHTTTTSTTSCCEEEEESSSSSH-HHHHHHHHHHHHHSSSSCCCCHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhccCCCCcEEEEcCCCCcH-HHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 4444455 467888999988876432 2346799999999999 999999987665432 3444555544
No 68
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Probab=97.11 E-value=0.00028 Score=79.84 Aligned_cols=52 Identities=8% Similarity=0.210 Sum_probs=40.4
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYR 145 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~ 145 (1184)
|.|+-+| ..+.++.|++.+..|.. +...-+||||.+|.|| ||++||+.+++.
T Consensus 193 WPD~gvP~~~~~~l~~i~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiaid~~~~ 245 (309)
T 2p6x_A 193 WPDHDVPSSIDPILELIWDVRCYQE-DDSVPICIHCSAGCGR-TGVICAIDYTWM 245 (309)
T ss_dssp CCCTTCGGGGHHHHHHHHHHHHHCC-SCSSCEEEECSSSSSH-HHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHHhc-cCCCcEEEEeCCCCcH-HHHHHHHHHHHH
Confidence 4444456 47889999999988753 3456799999999999 999999876553
No 69
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Probab=97.08 E-value=0.00044 Score=83.96 Aligned_cols=55 Identities=13% Similarity=0.177 Sum_probs=42.8
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.|+-+| ....++.|++.+..|... ....-+||||.+|.|| |||+||+.++...+
T Consensus 417 Wpd~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaG~GR-TGtfia~d~~~~~l 473 (532)
T 2b3o_A 417 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSAGIGR-TGTIIVIDMLMENI 473 (532)
T ss_dssp CCSSSCCSSSHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSSH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCch-hHHHHHHHHHHHHH
Confidence 4444455 457888999999988765 3346799999999999 99999998887653
No 70
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A*
Probab=97.07 E-value=0.00038 Score=78.63 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=41.3
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHh--cCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLS--LGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~--~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.|+-.| ....+++|++.++.+.. .....-+||||.+|.|| ||++||++++...
T Consensus 201 WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~ 257 (305)
T 2cjz_A 201 WPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGR-TGCFIATSICCQQ 257 (305)
T ss_dssp CCSSCCGGGHHHHHHHHHHHHHHHHHTCSSCCCEEEEESSSSHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhcccCCCCCEEEEeCCCcch-hHHHHHHHHHHHH
Confidence 4444456 56789999999988433 23456799999999999 9999999887643
No 71
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Probab=97.03 E-value=0.0004 Score=79.69 Aligned_cols=54 Identities=13% Similarity=0.177 Sum_probs=42.0
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcC-CCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLG-HQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d-~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.|+-+| .-+.|+.|++.+..|.... .+.-+||||.+|.|| |||+||..++...
T Consensus 208 WPD~gvP~~~~~ll~f~~~v~~~~~~~~~~~PiVVHCSAGvGR-TGtfiaid~~l~~ 263 (342)
T 3i36_A 208 WPDHGVPDTTDLLINFRYLVRDYMKQIPPESPILVHCSAGVGR-TGTFIAIDRLIYQ 263 (342)
T ss_dssp SCSSSSCSCSHHHHHHHHHHHHHHTTSCSSCCEEEESSSSSHH-HHHHHHHHHHHHH
T ss_pred cCcCCCCCCHHHHHHHHHHHHHHHHhCCCCCCEEEEcCCCChH-HHHHHHHHHHHHH
Confidence 4444455 5577889999999988653 456799999999999 9999998877654
No 72
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Probab=96.99 E-value=0.00063 Score=76.89 Aligned_cols=55 Identities=15% Similarity=0.208 Sum_probs=41.7
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQF 148 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~ 148 (1184)
|.++-.| ....|+.|++.+.+.+..+ +.=+||||.+|.|| ||++||+.++...+-
T Consensus 208 WPD~gvP~~~~~ll~fi~~v~~~~~~~-~~PIvVHCsaGvGR-TGtfiaid~~l~~l~ 263 (307)
T 3s3e_A 208 WPDFGVPNPPQTLVRFVRAFRDRIGAE-QRPIVVHCSAGVGR-SGTFITLDRILQQIN 263 (307)
T ss_dssp CCSSSCCSSTHHHHHHHHHHHHHHCSC-CSCEEEECSSSSHH-HHHHHHHHHHHHHTT
T ss_pred cccCCCCCChHHHHHHHHHHHHHhcCC-CCCEEEEcCCCchH-HHHHHHHHHHHHHHh
Confidence 4443345 5677889999888876543 34589999999999 999999998887653
No 73
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=96.91 E-value=0.00057 Score=84.12 Aligned_cols=55 Identities=9% Similarity=0.126 Sum_probs=43.5
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-+| ....++.|++.+..+.....+.-+||||.+|.|| ||++||+.++...+
T Consensus 490 WPD~gvP~~~~~ll~~i~~v~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 545 (599)
T 2jjd_A 490 WPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGR-TGTFIALSNILERV 545 (599)
T ss_dssp SCSSSCCSCCHHHHHHHHHHHHHHHHSTTCCEEEECSSSSSH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHhccCCCcEEEEeCCCCch-HHHHHHHHHHHHHH
Confidence 3333344 4567889999999988766677899999999999 99999998887554
No 74
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1
Probab=96.87 E-value=0.00079 Score=81.61 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=42.5
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcC-CCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLG-HQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d-~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.|+-+| ....++.|++.+..+.... ...-+||||.+|.|| ||++||+.++...+
T Consensus 423 WPD~gvP~~~~~~l~~~~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 479 (525)
T 2shp_A 423 WPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSAGIGR-TGTFIVIDILIDII 479 (525)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHHHHHHSTTCCCEEEECSSSSHH-HHHHHHHHHHHHHH
T ss_pred CCCCCcccChHHHHHHHHHHHHHHhccCCCCCEEEEcCCCCch-hHHHHHHHHHHHHH
Confidence 4444455 5688899999998887642 346799999999999 99999998776544
No 75
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A
Probab=96.87 E-value=0.00053 Score=77.95 Aligned_cols=54 Identities=15% Similarity=0.169 Sum_probs=37.7
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-+| ....++.|++.+..+. .....-+||||.+|.|| ||++||++++...+
T Consensus 219 WPD~gvP~~~~~~l~~i~~~~~~~-~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 273 (320)
T 2h4v_A 219 WPDMGVPEYALPVLTFVRRSSAAR-MPETGPVLVHCSAGVGR-TGTYIVIDSMLQQI 273 (320)
T ss_dssp CCSSSSCSCSHHHHHHHHHHHHTC-CTTCCCEEEESSSSSHH-HHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHHHHHHhhc-cCCCCCEEEECCCCCcH-HHHHHHHHHHHHHH
Confidence 3333344 3345778887776532 23346799999999999 99999998887653
No 76
>4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens}
Probab=96.73 E-value=0.001 Score=76.66 Aligned_cols=53 Identities=15% Similarity=0.101 Sum_probs=39.6
Q ss_pred CCCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHH
Q 001026 91 HYEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIY 144 (1184)
Q Consensus 91 ~~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly 144 (1184)
+|.|+-.| ....++.|++.+..+... ....-+||||.+|.|| |||+||+.+++
T Consensus 212 ~WPD~gvP~~~~~~l~~l~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l 266 (354)
T 4i8n_A 212 TWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGR-SGTFCLADTCL 266 (354)
T ss_dssp SCCTTCCCSCHHHHHHHHHHHHHTTTTCTTSCCEEEECSSSSHH-HHHHHHHHHHH
T ss_pred ccccCCccCCHHHHHHHHHHHHHHhhccCCCCCEEEEeCCCcch-HHHHHHHHHHH
Confidence 34444455 677889999998887543 2345799999999999 99999886554
No 77
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=96.69 E-value=0.0011 Score=81.24 Aligned_cols=55 Identities=13% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc-CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL-GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~-d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-+| ....++.|++.+..+... +...-+||||.+|.|| ||++||+.++...+
T Consensus 471 WPD~gvP~~~~~~l~~i~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~l 527 (575)
T 1lar_A 471 WPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGR-TGVFITLSIVLERM 527 (575)
T ss_dssp SCSSSCCSSCHHHHHHHHHHHHHHHHTTCCSCEEEESSSSSSH-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhcCCCCcEEEEECCCCch-HHHHHHHHHHHHHH
Confidence 4444344 457788999999988754 4456799999999999 99999998887643
No 78
>4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A*
Probab=96.64 E-value=0.0015 Score=74.14 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=37.9
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHh------------cCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLS------------LGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~------------~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.++-.| ....|+.|++.+.++-. ...+.=+||||.||-|| ||++||...+...
T Consensus 193 WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~~~~PivVHCSaGvGR-TGtfiaid~~l~~ 259 (314)
T 4ge6_A 193 WPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSAGIGR-TGTFCSLDICLAQ 259 (314)
T ss_dssp SCSSSCCSCSHHHHHHHHHHHHHHHHHHHHSCCC----CCSCCEEEECSSSSHH-HHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhccccccccccCCCCCEEEECCCCCcH-HHHHHHHHHHHHH
Confidence 3333344 56778888888876643 12334599999999999 9999998766654
No 79
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=96.61 E-value=0.0013 Score=81.02 Aligned_cols=55 Identities=16% Similarity=0.232 Sum_probs=41.4
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhc---------CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSL---------GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~---------d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
|.++-+| ....|+.|++.+.+++.. +...-+||||.+|.|| |||+||+.++...+
T Consensus 502 WPd~gvP~~~~~ll~~i~~v~~~~~~~~~~~~~~~~~~~PivVHCsaGvGR-TGtf~ai~~~l~~~ 566 (610)
T 1ygr_A 502 WSVEQLPAEPKELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRDGSQQ-TGIFCALLNLLESA 566 (610)
T ss_dssp CCSSSCCSCHHHHHHHHHHHHTTSCCCC-------CCCCCEEEEESSSSTT-HHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCCCEEEEeCCCCcc-hhHHHHHHHHHHHH
Confidence 4444355 577889999988887532 2345699999999999 99999998877653
No 80
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A
Probab=96.59 E-value=0.0022 Score=72.31 Aligned_cols=59 Identities=7% Similarity=0.107 Sum_probs=39.4
Q ss_pred EecCCCCCCCCCCc---HHHHHHHHHHHHHH----Hhc-------C-CCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 86 MDYPRHYEGCPLLT---METVHHFLRSSESW----LSL-------G-HQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 86 ~~~P~~~~~~p~p~---L~~l~~~c~~i~~W----L~~-------d-~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
++| .+|.|+-.|+ ...|+.|++.+.++ +.. + .+.-+||||.||.|| |||+||+.++...
T Consensus 187 ~~y-~~WPD~gvP~~~~~~~ll~~l~~v~~~~~~~~~~~~~~~~~~~~~~piVVHCSAGvGR-TGtfiaid~ll~~ 260 (306)
T 1lyv_A 187 VHV-GNWPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRAGVGR-TAQLIGAMCMNDS 260 (306)
T ss_dssp EEE-CCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGGCTTSSCCEEECSSSSSH-HHHHHHHHHHTCG
T ss_pred EEE-CCCCccCcCChhHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCCcEEEcCCCCch-hHHHHHHHHHHHh
Confidence 344 3455655665 45677888877654 211 1 223359999999999 9999998876544
No 81
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens}
Probab=96.28 E-value=0.0037 Score=76.87 Aligned_cols=54 Identities=11% Similarity=0.105 Sum_probs=40.6
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcC-CCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLG-HQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d-~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.++-+| ....++.|++.+..+.... ...-+||||.+|-|| |||+||+.++...
T Consensus 417 WPD~gvP~~~~~~l~fl~~v~~~~~~~~~~~PivVHCsaGvGR-TGtfiaid~~l~~ 472 (595)
T 3ps5_A 417 WPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSAGIGR-TGTIIVIDMLMEN 472 (595)
T ss_dssp CCSSSSCSCSHHHHHHHHHHHHHHHHCTTCCCEEEECSSSSHH-HHHHHHHHHHHHH
T ss_pred cccCCccCCHHHHHHHHHHHHHHHhhcCCCCCEEEEcCCCCch-HHHHHHHHHHHHH
Confidence 4444445 4577888999888876642 335699999999999 9999999877654
No 82
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A
Probab=96.28 E-value=0.0027 Score=77.82 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=39.3
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.|+-+| ....++.|++.+..+. .....-+||||.+|.|| ||++||+.++..+
T Consensus 182 WpD~gvP~~~~~~l~~~~~v~~~~-~~~~~pivVHCsaGvGR-TGtfiaid~~l~~ 235 (575)
T 1lar_A 182 WPDHGVPEYPTPILAFLRRVKACN-PLDAGPMVVHCSAGVGR-TGCFIVIDAMLER 235 (575)
T ss_dssp SCSSSCCSCSHHHHHHHHHHHHHS-CTTCCCEEEESSSSSSH-HHHHHHHHHHHHH
T ss_pred CCCCCcccCHHHHHHHHHHHHHhc-CCCCCCEEEEecCCCcc-eeEEEEhHHHHHH
Confidence 4444455 3577888998887753 33445799999999999 9999999877654
No 83
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A*
Probab=96.09 E-value=0.0026 Score=78.52 Aligned_cols=53 Identities=6% Similarity=0.033 Sum_probs=38.4
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|.|+-+| ....++.|++.+..+.. ....-+||||.+|.|| ||++||+.++...
T Consensus 196 WPD~gvP~~~~~~l~~~~~v~~~~~-~~~~PivVHCsaGvGR-TGtfiaid~~l~~ 249 (610)
T 1ygr_A 196 WPDHGVPEDPHLLLKLRRRVNAFSN-FFSGPIVVHSSAGVGR-TGTYIGIDAMLEG 249 (610)
T ss_dssp CCTTSCCSCHHHHHHHHHHHTTSCC-TTCCCEEEECSSSSHH-HHHHHHHHHHHHT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhc-cCCCCeEEEcCCCCCc-hhhHHHHHHHHHH
Confidence 4444455 56678888887665421 2345799999999999 9999999888754
No 84
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=96.02 E-value=0.0047 Score=69.38 Aligned_cols=37 Identities=19% Similarity=0.173 Sum_probs=28.9
Q ss_pred CcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHH
Q 001026 119 QNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMI 158 (1184)
Q Consensus 119 ~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~ 158 (1184)
+.-|+|||.+||.| ||+++||+|+..|+ ..+..++-|
T Consensus 173 ~~pvl~HC~aGkDR-TG~~~alll~~~g~--~~~~I~~DY 209 (296)
T 1ywf_A 173 GRPVLTHCFAGKDR-TGFVVALVLEAVGL--DRDVIVADY 209 (296)
T ss_dssp TCCEEEECSSSSSH-HHHHHHHHHHHTTC--CHHHHHHHH
T ss_pred CCCEEEECCCCCcc-ccHHHHHHHHHcCC--CHHHHHHHH
Confidence 44699999999999 99999999999875 333344433
No 85
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens}
Probab=95.89 E-value=0.0054 Score=75.51 Aligned_cols=52 Identities=13% Similarity=0.174 Sum_probs=37.7
Q ss_pred CCCCCCC-cHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHh
Q 001026 92 YEGCPLL-TMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYR 145 (1184)
Q Consensus 92 ~~~~p~p-~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~ 145 (1184)
|.|+-.| ....++.|++.+..+- .....-+||||.+|.|| ||++||+..+..
T Consensus 196 WpD~gvP~~~~~~l~~~~~v~~~~-~~~~~PivVHCsaGvGR-TGtfiaid~~l~ 248 (599)
T 2jjd_A 196 WPDFGVPFTPIGMLKFLKKVKTLN-PVHAGPIVVHCSAGVGR-TGTFIVIDAMMA 248 (599)
T ss_dssp CCSSSCCSCSHHHHHHHHHHHHHS-CTTCCCEEEECSSSSSH-HHHHHHHHHHHH
T ss_pred CCCCCCCCChHHHHHHHHHHHhhc-cCCCceEEEEeCCCCcc-cchhhHHHHHHH
Confidence 4444455 4578889999888753 23345699999999999 999998765543
No 86
>1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1
Probab=95.79 E-value=0.013 Score=66.94 Aligned_cols=89 Identities=11% Similarity=0.113 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1083 EFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVS------TLLNFVKMFVLAHEENCRQLEFERKKAEK 1156 (1184)
Q Consensus 1083 ~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~------~l~~F~~~fk~a~ee~~k~~e~ekkk~ek 1156 (1184)
.|.......+...+..+..+...+.++...|.+ +-+||+ ...+|+..|......+.+..++++++++.
T Consensus 245 ~f~~~m~~Fl~~a~~~~~~l~~~~~~~~~~~~~------l~~yfged~~~~~~~~fF~~~~~F~~~f~~a~~en~~r~e~ 318 (340)
T 1v9d_A 245 KFVEKMTSFVKDAQEQYNKLRMMHSNMETLYKE------LGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRET 318 (340)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466666777777777777777777777666643 234554 46788888888888888888888888777
Q ss_pred HHHHHHHHhhhccchhhhcCc
Q 001026 1157 AVENEKLKTQKGQSEHLVQNP 1177 (1184)
Q Consensus 1157 eaekek~k~~~~e~~~~~q~~ 1177 (1184)
|+++++++.++++.+++++++
T Consensus 319 eek~~~~~~~~e~~~~~~~~~ 339 (340)
T 1v9d_A 319 EEKMRRAKLAKEKAEKERLEK 339 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 777767666666666666554
No 87
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=95.70 E-value=0.036 Score=56.11 Aligned_cols=115 Identities=13% Similarity=0.241 Sum_probs=70.7
Q ss_pred CceeeeCcEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcc---cccccccCCceEEecCCC
Q 001026 15 GLLEISERVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQ---IGQVLSEYDMTVMDYPRH 91 (1184)
Q Consensus 15 DLtyIT~RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~---~~~~~~~f~~~V~~~P~~ 91 (1184)
.+..|+++|+.- +.++. .++..|.+ .+- + .|.|++.+..... ..+.......++..++.|
T Consensus 14 n~~~V~~~l~~s--~~p~~------------a~a~~La~-~Ga-~-vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~D 76 (157)
T 3gxh_A 14 ALQQQAPQLLSS--GLPNE------------QQFSLLKQ-AGV-D-VVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVD 76 (157)
T ss_dssp TCEEEETTEEEE--BCCCH------------HHHHHHHH-TTC-C-EEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCC
T ss_pred ChheecCceeEc--CCCCH------------HHHHHHHH-cCC-C-EEEECCCcccccccccHHHHHHHcCCeEEEecCC
Confidence 577899999887 46652 33555654 332 2 4567764432211 122234457788888875
Q ss_pred CCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHH
Q 001026 92 YEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMI 158 (1184)
Q Consensus 92 ~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~ 158 (1184)
.. .++.+.+..+++.+.+-+ + . =|+|||.+| .| .|.++++||+..|+ +.++| +++
T Consensus 77 v~---~~~~~~v~~~~~~i~~~~--G-~-dVLVnnAgg-~r-~~~l~~~~~~~~G~--~~~~A-~~v 131 (157)
T 3gxh_A 77 WQ---NPKVEDVEAFFAAMDQHK--G-K-DVLVHCLAN-YR-ASAFAYLYQLKQGQ--NPNMA-QTM 131 (157)
T ss_dssp TT---SCCHHHHHHHHHHHHHTT--T-S-CEEEECSBS-HH-HHHHHHHHHHHTTC--CCCHH-HHT
T ss_pred CC---CCCHHHHHHHHHHHHhcC--C-C-CEEEECCCC-CC-HHHHHHHHHHHcCC--CHHHH-HHH
Confidence 43 356688888877776532 2 2 488999865 47 68999999976554 44456 544
No 88
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=95.49 E-value=0.012 Score=72.81 Aligned_cols=61 Identities=8% Similarity=0.071 Sum_probs=37.8
Q ss_pred eEEecC-CCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 84 TVMDYP-RHYEGCPLLTMETVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 84 ~V~~~P-~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
.|.+|= .+|.++-.|... ++.|++.+..... ....=+||||.+|.|| ||++||+.++...+
T Consensus 485 ~V~h~~y~~WPD~gvP~~~-~~~li~~v~~~~~-~~~~PivVHCsaGiGR-tGtf~a~~~~l~~l 546 (627)
T 2nlk_A 485 EVRHFQCPKWPNPDAPISS-TFELINVIKEEAL-TRDGPTIVHDEYGAVS-AGMLCALTTLSQQL 546 (627)
T ss_dssp EEEEEECCSSSCTTSCGGG-HHHHHHHHHHHHT-TCCSCEEEEESSSCHH-HHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCcCChh-HHHHHHHHHHhhc-cCCCeEEEEeCCCCch-HHHHHHHHHHHHHH
Confidence 455551 124444355432 3455555555432 3345689999999999 99999998776543
No 89
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Probab=95.30 E-value=0.0089 Score=73.93 Aligned_cols=45 Identities=18% Similarity=0.225 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 100 METVHHFLRSSESWLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 100 L~~l~~~c~~i~~WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
...++.|++.+..+- .....-+||||.+|.|| ||++||+.++...
T Consensus 210 ~~~ll~~i~~~~~~~-~~~~~PivVHCsaGvGR-TGtfiaid~~l~~ 254 (627)
T 2nlk_A 210 ALPVLTFVRRSSAAR-MPETGPVLVHCSAGVGR-TGTYIVIDSMLQQ 254 (627)
T ss_dssp SHHHHHHHHHHHHTC-CSSCCCEEEECSSSSHH-HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhc-cCCCceEEEEcCCCCCC-ccEEEEHHHHHHH
Confidence 345777887766532 22335689999999999 9999998877653
No 90
>3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D
Probab=95.06 E-value=0.019 Score=68.29 Aligned_cols=85 Identities=12% Similarity=0.118 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1084 FLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVS------TLLNFVKMFVLAHEENCRQLEFERKKAEKA 1157 (1184)
Q Consensus 1084 Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~------~l~~F~~~fk~a~ee~~k~~e~ekkk~eke 1157 (1184)
|.......+...+..+..++..+..+..-|.+ +-+||+ ...+|+..|......+.++.++++++++.|
T Consensus 317 f~~~m~~Fl~~A~~~~~~L~~~~~~~~~~~~~------l~~yFgedp~~~~~~eFF~~~~~F~~~fkkA~~eN~~r~e~e 390 (457)
T 3obv_E 317 FVEKMTSFVKDAQEQYNKLRMMHSNMETLYKE------LGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETE 390 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444555555555555555555444422 234443 457899999999999998888888877777
Q ss_pred HHHHHHHhhhccchhhh
Q 001026 1158 VENEKLKTQKGQSEHLV 1174 (1184)
Q Consensus 1158 aekek~k~~~~e~~~~~ 1174 (1184)
++.++++.++++.++++
T Consensus 391 ek~~r~~~a~e~~~~~~ 407 (457)
T 3obv_E 391 EKMRRAKLAKEKAEKER 407 (457)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66555444444444333
No 91
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=93.78 E-value=0.074 Score=61.00 Aligned_cols=65 Identities=9% Similarity=0.066 Sum_probs=51.2
Q ss_pred CCCCCcHHHHHHHHHHHHHHHhcC-CCcEEEEEecCCCCC---chHHHHHHHHHHhhCCCcHHHHHHHHh
Q 001026 94 GCPLLTMETVHHFLRSSESWLSLG-HQNVLLMHCERGGWP---VLAFMLAALLIYRKQFTGEQKTLDMIY 159 (1184)
Q Consensus 94 ~~p~p~L~~l~~~c~~i~~WL~~d-~~NVvvvHCk~Gkgr---~tg~mia~yLly~~~~~~~~~aL~~~~ 159 (1184)
|+-++.|.+|+.||..+++-|+.- ..|-++|||..|-.+ -++++||||+++.... +.++|+..++
T Consensus 50 dfgp~~~~~~~~~~~~~~~~l~~~~~~~k~~~~~~~~~~~~r~naa~L~~~y~~~~~~~-~~~~a~~~~~ 118 (348)
T 1ohe_A 50 DFGPLNLAMVYRYCCKINKKLKSITMLRKKIVHFTGSDQRKQANAAFLVGCYMVIYLGR-TPEEAYRILI 118 (348)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHCGGGTTSEEEEEECSCHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHT
T ss_pred hcCCccHHHHHHHHHHHHHHHhChhhcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCC-CHHHHHHHHH
Confidence 444789999999999999999863 347899999988641 1689999999987654 5567888775
No 92
>2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A
Probab=84.58 E-value=3.2 Score=49.53 Aligned_cols=24 Identities=8% Similarity=-0.011 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1129 LLNFVKMFVLAHEENCRQLEFERK 1152 (1184)
Q Consensus 1129 l~~F~~~fk~a~ee~~k~~e~ekk 1152 (1184)
..+|+..|......+.+..++.++
T Consensus 374 ~~~fF~~~~~F~~~f~~A~~en~~ 397 (483)
T 2j1d_G 374 PDEFFGIFDQFLQAVSEAKQENEN 397 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777777777776666543
No 93
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=83.53 E-value=7.2 Score=45.40 Aligned_cols=38 Identities=11% Similarity=0.201 Sum_probs=22.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQY 1112 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~y 1112 (1184)
+.+.+++++|++..+.....+.+....+.+.|.++.+|
T Consensus 262 ~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~~~~~~e~ 299 (413)
T 4hpq_C 262 ASFVRKVNMLLDERDADKAKMQATLSKLLTELRKHEEY 299 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 34455666666666666666666666666555554433
No 94
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=83.35 E-value=11 Score=41.04 Aligned_cols=18 Identities=6% Similarity=-0.154 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 001026 1086 SYAEGEVRSLALLYSSVG 1103 (1184)
Q Consensus 1086 ~~a~~~l~~L~~~~~~~~ 1103 (1184)
..++.++..++..+.++.
T Consensus 56 ~d~~~~~~~~e~~i~~~~ 73 (256)
T 3na7_A 56 LALKLQVSKNEQTLQDTN 73 (256)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333443333333
No 95
>1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A
Probab=80.93 E-value=4 Score=47.58 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=26.6
Q ss_pred ccccccccccccccceeeccc-cCCcchhH
Q 001026 926 RGLAHIELRRANNCEIMLTKV-KIPLPDLM 954 (1184)
Q Consensus 926 r~V~lLd~kRa~nl~I~L~kl-K~s~~ei~ 954 (1184)
..+.|||.+|++|++|+|+++ +++++||+
T Consensus 67 ~~v~lLd~kraqNi~I~L~~~~~~~~~ei~ 96 (411)
T 1ux5_A 67 QKITFLSRDISQQFGINLHMYSSLSVADLV 96 (411)
T ss_dssp TSBCCSCHHHHHHHHHHTGGGTTSCHHHHH
T ss_pred CeeeecChHHHHHHHHHHHhcCCCCHHHHH
Confidence 358999999999999999998 89999987
No 96
>1ez3_A Syntaxin-1A; three helix bundle, endocytosis/exocytosis complex; 1.90A {Rattus norvegicus} SCOP: a.47.2.1 PDB: 1br0_A 3lg7_A*
Probab=75.82 E-value=24 Score=33.73 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=24.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
+.....|...+.+.......++..++.++....+
T Consensus 46 ~~~~~~l~~l~~~i~~~a~~ik~~Lk~l~~~~~~ 79 (127)
T 1ez3_A 46 EKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQ 79 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777777777777777777777766554
No 97
>2p22_C Protein SRN2; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_C 2f66_C
Probab=73.60 E-value=46 Score=34.68 Aligned_cols=50 Identities=12% Similarity=0.090 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1092 VRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLE 1148 (1184)
Q Consensus 1092 l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~e 1148 (1184)
+..|+....+.++.-.++..-|++.... ..|.+|+..|+..++.+-.|++
T Consensus 130 ~~~L~~a~~e~eeeS~~l~~~F~~~~~e-------~dv~~Fl~~y~~~R~~yH~Rre 179 (192)
T 2p22_C 130 KKKLEQNTKKLDEESSQLETTTRSIDSA-------DDLDQFIKNYLDIRTQYHLRRE 179 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCCCCH-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccc-------chHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666667777777777662111 2477788888888877754444
No 98
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=72.42 E-value=35 Score=41.15 Aligned_cols=20 Identities=20% Similarity=0.202 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 001026 1046 LAEEMQAISKGLEKVVQELT 1065 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~ 1065 (1184)
+.+++....+.+...+.+++
T Consensus 468 l~~~~~~~~~~l~~~~~~i~ 487 (597)
T 3oja_B 468 LTNEQIQQEQLLQGLHAEID 487 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 33344444444444444433
No 99
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=71.50 E-value=62 Score=29.71 Aligned_cols=103 Identities=8% Similarity=-0.074 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCC
Q 001026 1041 IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARC 1120 (1184)
Q Consensus 1041 i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~ 1120 (1184)
++|..+...++++..=|..++..|.....-+..-+.....+++ .+....+|..-+..+..+.+....|+.--..
T Consensus 2 l~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~-h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~----- 75 (118)
T 3uul_A 2 MDLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFAT-HETFMMELSAHQSSVGSVLQAGNQLMTQGTL----- 75 (118)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS-----
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----
Confidence 4567778888888888888877777654332222222222222 2344555666666677777777776642211
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1121 PFEQVVSTLLNFVKMFVLAHEENCRQLEFE 1150 (1184)
Q Consensus 1121 ~~e~ff~~l~~F~~~fk~a~ee~~k~~e~e 1150 (1184)
..+ -...|..=+..++..+++.+......
T Consensus 76 ~~~-~~~~i~~~l~~l~~rw~~L~~~~~~R 104 (118)
T 3uul_A 76 SDE-EEFEIQEQMTLLNARWEALRVESMER 104 (118)
T ss_dssp CHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Chh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 12334444455555555554444333
No 100
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=69.96 E-value=13 Score=38.52 Aligned_cols=72 Identities=17% Similarity=0.072 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC-CC----CHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPA-RC----PFEQVVSTLLNFVKMFVLAHEENCRQ 1146 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~-~~----~~e~ff~~l~~F~~~fk~a~ee~~k~ 1146 (1184)
+.++.++.....++...+..|+..+..+......+..|.-+-.. .. ..-.....+.+|-..|..+++++.-.
T Consensus 73 e~~k~K~~~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~~~SleD~e~kln~aiEr~alL 149 (189)
T 2v71_A 73 EALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFL 149 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 56677777777777777888888888887777777777643110 00 11234568888888999998887633
No 101
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=69.25 E-value=40 Score=36.66 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=14.6
Q ss_pred ccchhchhcccccCC--cchHHHHHHH
Q 001026 1016 LDSLLKLTDTRARNN--KMTLMHYLCK 1040 (1184)
Q Consensus 1016 L~SL~KL~dtKs~d~--k~TLLhflvk 1040 (1184)
+|.|-|+.|.=.+.. ...|-+-|.+
T Consensus 58 ~Da~qKvad~A~~s~g~s~elG~~L~~ 84 (253)
T 2d1l_A 58 LDAFQKVADMATNTRGGTREIGSALTR 84 (253)
T ss_dssp HHHHHHHHHHHHTSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCcchHHHHHHHHH
Confidence 677888877544322 3455555555
No 102
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=69.00 E-value=0.99 Score=61.26 Aligned_cols=10 Identities=0% Similarity=0.202 Sum_probs=5.2
Q ss_pred HHHHHHHHHH
Q 001026 105 HFLRSSESWL 114 (1184)
Q Consensus 105 ~~c~~i~~WL 114 (1184)
.++..+.+++
T Consensus 988 ~~~~~v~~~~ 997 (1752)
T 3h0g_A 988 DIINGLNELI 997 (1752)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3445555555
No 103
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=68.49 E-value=72 Score=29.21 Aligned_cols=103 Identities=7% Similarity=-0.116 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCC
Q 001026 1041 IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARC 1120 (1184)
Q Consensus 1041 i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~ 1120 (1184)
++|..+..+++++..=|..++..|.....-+...+.....+ .-.+....+|..-+..+..+.+....|+.--. +
T Consensus 2 l~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l-~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~-----~ 75 (119)
T 3uun_A 2 VNLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQF-HTHEGYMMDLTAHQGRVGNILQLGSKLIGTGK-----L 75 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----S
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-----C
Confidence 46777888888888888877777766543322222222222 22234455556666666677777776664211 1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1121 PFEQVVSTLLNFVKMFVLAHEENCRQLEFE 1150 (1184)
Q Consensus 1121 ~~e~ff~~l~~F~~~fk~a~ee~~k~~e~e 1150 (1184)
. .+-...|..=+..++..+++........
T Consensus 76 ~-~~~~~~i~~~l~~l~~rw~~L~~~~~~R 104 (119)
T 3uun_A 76 S-EDEETEVQEQMNLLNSRWECLRVASMEK 104 (119)
T ss_dssp C-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1122334444555555555555444433
No 104
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=68.41 E-value=80 Score=33.98 Aligned_cols=14 Identities=0% Similarity=-0.092 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHhhh
Q 001026 988 LKRIMQTILSLGNA 1001 (1184)
Q Consensus 988 L~~lL~~IL~iGN~ 1001 (1184)
...+...+..+|+.
T Consensus 58 ~~~f~~~L~~~~~~ 71 (265)
T 2q12_A 58 THLTSKLLKEYEKQ 71 (265)
T ss_dssp HHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHhh
Confidence 34444555555543
No 105
>1dn1_B Syntaxin 1A, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3c98_B
Probab=68.33 E-value=1.1e+02 Score=33.39 Aligned_cols=62 Identities=13% Similarity=0.105 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1045 FLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNA 1106 (1184)
Q Consensus 1045 ~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~ 1106 (1184)
++..+|..+...+..+.+.....-......+.....|.....+.......+...++.++...
T Consensus 39 ~I~~~I~~I~~~v~~l~~l~~~~l~~~~~~~~~~~~l~~l~~~i~~~~~~i~~~Lk~l~~~~ 100 (267)
T 1dn1_B 39 EIRGFIDKIAENVEEVKRKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSI 100 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555544444444433322221111234455666666666666666666666665544
No 106
>3uv5_A Transcription initiation factor TFIID subunit 1; tandem bromodomain, TAF1, cell cycle gene 1 protein, TBP-ASS factor 250 kDa; 2.03A {Homo sapiens} PDB: 1eqf_A
Probab=67.65 E-value=85 Score=34.08 Aligned_cols=23 Identities=17% Similarity=0.160 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCC
Q 001026 1094 SLALLYSSVGRNADALAQYFGED 1116 (1184)
Q Consensus 1094 ~L~~~~~~~~~~~~~l~~yFGEd 1116 (1184)
.+.+...++.-.|..+..|-+++
T Consensus 194 ~~~~f~~D~~lif~Na~~yN~~~ 216 (265)
T 3uv5_A 194 SRESFLDDVNLILANSVKYNGPE 216 (265)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCTT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCC
Confidence 35566667777788888888875
No 107
>4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus}
Probab=66.87 E-value=23 Score=41.09 Aligned_cols=29 Identities=10% Similarity=0.038 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1130 LNFVKMFVLAHEENCRQLEFERKKAEKAV 1158 (1184)
Q Consensus 1130 ~~F~~~fk~a~ee~~k~~e~ekkk~ekea 1158 (1184)
.+|+..|.+...++.+++++.++++++|+
T Consensus 360 ~~fF~~~~~F~~~fk~A~~en~~r~~~e~ 388 (402)
T 4eah_A 360 SVFFPVFVRFIRSYKEAEQENEARKKQEE 388 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666777666666655554443
No 108
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=63.74 E-value=87 Score=33.94 Aligned_cols=12 Identities=25% Similarity=0.567 Sum_probs=7.8
Q ss_pred ccchhchhcccc
Q 001026 1016 LDSLLKLTDTRA 1027 (1184)
Q Consensus 1016 L~SL~KL~dtKs 1027 (1184)
+|.|.|+.|.=.
T Consensus 56 ~dal~kia~~A~ 67 (253)
T 2ykt_A 56 FDALVKMGELAS 67 (253)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 666777777533
No 109
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=63.64 E-value=67 Score=42.05 Aligned_cols=94 Identities=10% Similarity=0.153 Sum_probs=48.1
Q ss_pred HHHHHHHHhhhC-CCCcEEEEEeccCCcCc--ccccccccCCceEEe-cCCCCCCCC---CCcHHHHHHHHHHHHHHHhc
Q 001026 44 LGGIVGQLREYF-PEASFMVFNFREGEHQS--QIGQVLSEYDMTVMD-YPRHYEGCP---LLTMETVHHFLRSSESWLSL 116 (1184)
Q Consensus 44 i~dV~~fL~~~H-~~~~y~V~Nl~ee~~~~--~~~~~~~~f~~~V~~-~P~~~~~~p---~p~L~~l~~~c~~i~~WL~~ 116 (1184)
-..|+.-|+.|| .. -+||-.++.-.-. .+.. +..|+..++. | .|+. .| -.|+.+-..++.-|..
T Consensus 82 e~~vl~nL~~Ry~~~--~~iYTy~G~iLiavNPyk~-l~iy~~~~~~~Y----~~~~~~~~p--PHifaiA~~Ay~~m~~ 152 (1080)
T 2dfs_A 82 EPAVLHNLKVRFIDS--KLIYTYCGIVLVAINPYEQ-LPIYGEDIINAY----SGQNMGDMD--PHIFAVAEEAYKQMAR 152 (1080)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEETTEEEEECCSSC-CSCSSHHHHHHH----TTCCGGGSC--CCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc--CCchhccCceeEEecCCcc-cccCCHHHHHHh----cCCCCCCCC--CcHHHHHHHHHHHHHh
Confidence 356888999999 65 4677765532110 0000 1223333221 2 1221 12 1477777777766655
Q ss_pred C-CCcEEEEEecCCCCCchH-HHHHHHHHHhh
Q 001026 117 G-HQNVLLMHCERGGWPVLA-FMLAALLIYRK 146 (1184)
Q Consensus 117 d-~~NVvvvHCk~Gkgr~tg-~mia~yLly~~ 146 (1184)
+ .+-.++|--+.|-|-+.. =.|--||.+.+
T Consensus 153 ~~~~QsIiisGESGAGKTe~~K~i~~yla~~~ 184 (1080)
T 2dfs_A 153 DERNQSIIVSGESGAGKTVSAKYAMRYFATVS 184 (1080)
T ss_dssp HTCCEEEEEECSTTSSHHHHHHHHHHHHHHTT
T ss_pred cCCCcEEEEcCCCCCCccchHHHHHHHHHhhc
Confidence 4 445677777777776222 24445555543
No 110
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=63.01 E-value=50 Score=37.58 Aligned_cols=65 Identities=9% Similarity=0.138 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 001026 1051 QAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGE 1115 (1184)
Q Consensus 1051 ~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGE 1115 (1184)
+.+...|++|+++|............+...|.+++..-.+.++..++.|.++.+..++=+.|+-+
T Consensus 63 r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~ 127 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRR 127 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHH
Confidence 44555566666666555444444455556666666666666666666665555555544444433
No 111
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=62.97 E-value=31 Score=40.76 Aligned_cols=28 Identities=14% Similarity=0.103 Sum_probs=11.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1076 NFCKLLKEFLSYAEGEVRSLALLYSSVG 1103 (1184)
Q Consensus 1076 ~f~~~m~~Fl~~a~~~l~~L~~~~~~~~ 1103 (1184)
.+.+.+.+.++........+++.|.++-
T Consensus 85 qy~k~~~E~Lr~rq~q~~dNdNtynE~S 112 (562)
T 3ghg_A 85 SLTTNIMEILRGDFSSANNRDNTYNRVS 112 (562)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhhccchhHHHHH
Confidence 3344444444333333334444444333
No 112
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=62.42 E-value=68 Score=34.18 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 001026 1124 QVVSTLLNFVKMFVLAHEENCR 1145 (1184)
Q Consensus 1124 ~ff~~l~~F~~~fk~a~ee~~k 1145 (1184)
.|+.-|.+|+..|+...+...|
T Consensus 131 ~vi~Pl~~~~~~~~~i~~~ikK 152 (251)
T 2fic_A 131 QALLTMDTYLGQFPDIKSRIAK 152 (251)
T ss_dssp HTHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHH
Confidence 4555666666555555444433
No 113
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=61.29 E-value=66 Score=30.58 Aligned_cols=70 Identities=17% Similarity=0.102 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCC-CCCH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1077 FCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPA-RCPF----EQVVSTLLNFVKMFVLAHEENCRQ 1146 (1184)
Q Consensus 1077 f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~-~~~~----e~ff~~l~~F~~~fk~a~ee~~k~ 1146 (1184)
|+.++.....++...+..|+..+..+...-..+..|.-+-.. ...+ -.....|.+|-..|..|++++.-.
T Consensus 22 ~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalL 96 (111)
T 2v66_B 22 LKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFL 96 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 344444444444455555555555555444444444432100 0011 134668899999999999988643
No 114
>1s94_A S-syntaxin; three helix bundle, structural plasticity, endocytosis-exocy complex; 3.34A {Loligo pealei} SCOP: a.47.2.1
Probab=60.90 E-value=24 Score=36.09 Aligned_cols=64 Identities=9% Similarity=0.128 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1044 KFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNAD 1107 (1184)
Q Consensus 1044 ~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~ 1107 (1184)
..+..+|+.|...+.++.+.-...-............|...+.+.......++..++.++....
T Consensus 46 ~~I~~~i~~i~~~v~~l~~~~~~~L~~~~~~~~~k~~le~l~~~i~~~a~~ik~~Lk~l~~~~~ 109 (180)
T 1s94_A 46 EEIRAMIDKISDNVDAVKKKHSDILSAPQTDDQMKEELEELMTDIKRTANKVRGKLKTIELNIE 109 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555444444433322221111122344566666666666666666666666665444
No 115
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=59.87 E-value=74 Score=29.27 Aligned_cols=84 Identities=15% Similarity=0.249 Sum_probs=50.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC-----ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1032 MTLMHYLCKIQLKFLAEEMQAISKGLEKVVQELTASENDG-----EVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNA 1106 (1184)
Q Consensus 1032 ~TLLhflvki~L~~L~~El~~l~k~L~kv~~el~~s~~d~-----~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~ 1106 (1184)
+..++|..+ ...++.+.|...+..|+.+++.|....+.. .....+.+.-..|+.-| .++..|.+.++.+++.|
T Consensus 4 ~~P~~yF~~-lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~FiaLA-a~l~~lH~~V~~~Ke~Y 81 (93)
T 3t98_B 4 MAPADYFRV-LVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALA-AQLQSIHENVKVLKEQY 81 (93)
T ss_dssp -CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 345566655 223344555555666666666655543211 12233444555666655 56788999999999999
Q ss_pred HHHHhhhCCCC
Q 001026 1107 DALAQYFGEDP 1117 (1184)
Q Consensus 1107 ~~l~~yFGEd~ 1117 (1184)
..+..|+-.|.
T Consensus 82 l~~rr~~~~d~ 92 (93)
T 3t98_B 82 LSYRKMFLGDA 92 (93)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhccC
Confidence 99998887653
No 116
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=59.24 E-value=56 Score=33.49 Aligned_cols=22 Identities=5% Similarity=0.196 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 001026 1125 VVSTLLNFVKMFVLAHEENCRQ 1146 (1184)
Q Consensus 1125 ff~~l~~F~~~fk~a~ee~~k~ 1146 (1184)
+-..|.+.+..|.++...+.++
T Consensus 89 L~~~f~~~~~~fq~~Q~~~~~~ 110 (196)
T 1fio_A 89 SRQRFLKLIQDYRIVDSNYKEE 110 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555444433
No 117
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=59.13 E-value=1.4e+02 Score=35.19 Aligned_cols=63 Identities=10% Similarity=0.112 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001026 1050 MQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQY 1112 (1184)
Q Consensus 1050 l~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~y 1112 (1184)
+...+..+++++.||...+++.....+-..+-..||+.++.+|+.....+.++....+.+-.|
T Consensus 316 ~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~~f~~~ 378 (551)
T 2b5u_A 316 VEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQFNRF 378 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHhhhhhhhh
Confidence 445556666777776655443211112223445777888888877777777777766665543
No 118
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypept carboxypeptidase, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=57.31 E-value=18 Score=43.19 Aligned_cols=39 Identities=8% Similarity=0.192 Sum_probs=27.6
Q ss_pred HHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001026 1104 RNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEE 1142 (1184)
Q Consensus 1104 ~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee 1142 (1184)
..|+.|+.-|-.+-....++.+|..|..++..+.+.+.+
T Consensus 153 ~pYDaLLd~yEpg~t~~~ld~iF~~lk~~L~~Ll~~i~~ 191 (505)
T 3dwc_A 153 HPYEALVDIYEPGMTLQRLDEIFGNVRSWLPELLKEVQE 191 (505)
T ss_dssp CHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 447888888877666556788888888887666555543
No 119
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=55.96 E-value=60 Score=32.00 Aligned_cols=11 Identities=9% Similarity=0.241 Sum_probs=4.9
Q ss_pred HHHHHhhhhcC
Q 001026 994 TILSLGNALNH 1004 (1184)
Q Consensus 994 ~IL~iGN~LN~ 1004 (1184)
+++.+..|+|.
T Consensus 29 ~L~~vA~~vd~ 39 (138)
T 3hnw_A 29 YLQRVASYINN 39 (138)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34444444443
No 120
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=54.11 E-value=20 Score=36.24 Aligned_cols=28 Identities=14% Similarity=0.074 Sum_probs=19.8
Q ss_pred hccHHHHHHHHhhhCC---CCcEEEEEeccC
Q 001026 41 KEYLGGIVGQLREYFP---EASFMVFNFREG 68 (1184)
Q Consensus 41 RN~i~dV~~fL~~~H~---~~~y~V~Nl~ee 68 (1184)
+-..+++.+.|+..-. ..++.|.-+++.
T Consensus 32 ~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~~ 62 (169)
T 3f4a_A 32 YLDPTELHRWMQEGHTTTLREPFQVVDVRGS 62 (169)
T ss_dssp EECHHHHHHHHHHTSCTTTCCCEEEEECCST
T ss_pred EeCHHHHHHHHhcCCccCcCCCEEEEECCch
Confidence 4677889999987431 124999999873
No 121
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=53.96 E-value=55 Score=30.15 Aligned_cols=21 Identities=10% Similarity=-0.127 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001026 1126 VSTLLNFVKMFVLAHEENCRQ 1146 (1184)
Q Consensus 1126 f~~l~~F~~~fk~a~ee~~k~ 1146 (1184)
|..|.+=+++++.|++.....
T Consensus 64 yE~LQDkL~qi~eAR~ALdaL 84 (98)
T 3f1i_H 64 YEGLQDKLAQIRDARGALSAL 84 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444444555555555544433
No 122
>1gs9_A Apolipoprotein E, APOE4; lipid transport, heparin-binding, plasma, lipid binding protein; 1.7A {Homo sapiens} SCOP: a.24.1.1 PDB: 1or3_A 1or2_A 1le4_A 1bz4_A 1lpe_A 1le2_A
Probab=53.74 E-value=1.9e+02 Score=29.21 Aligned_cols=92 Identities=11% Similarity=0.091 Sum_probs=43.6
Q ss_pred HHHHHHHH-HHHHHHHHHHHHhhhccC-CccchhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhCCCCCCCC
Q 001026 1045 FLAEEMQA-ISKGLEKVVQELTASEND-GEVSGNFCKLLKEFLSYAEGEVRSLALLYS-SVGRNADALAQYFGEDPARCP 1121 (1184)
Q Consensus 1045 ~L~~El~~-l~k~L~kv~~el~~s~~d-~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~-~~~~~~~~l~~yFGEd~~~~~ 1121 (1184)
.|..|++. |...+..+...+...... ....+.|...+..=.+..+.+|...-+.++ ++.-...+|...+|..
T Consensus 55 el~qel~~~l~~~ld~l~~~~~~l~~~L~P~t~el~~~l~~~~e~Lr~~L~~d~EelR~~l~p~~~el~~~l~~~----- 129 (165)
T 1gs9_A 55 QVTQELRALMDETMKELKAYKSELEEQLTPVAEETRARLSKELQAAQARLGADMEDVRGRLVQYRGEVQAMLGQS----- 129 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 34455554 455566666655554433 234445555444444444433332222221 2233334444444442
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 001026 1122 FEQVVSTLLNFVKMFVLAHE 1141 (1184)
Q Consensus 1122 ~e~ff~~l~~F~~~fk~a~e 1141 (1184)
++++=..|..++..|++-+.
T Consensus 130 ~EelR~kl~P~~eeL~~~~~ 149 (165)
T 1gs9_A 130 TEELRVRLASHLRKLRKRLL 149 (165)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 46666666666666654443
No 123
>1tt9_A Formimidoyltransferase-cyclodeaminase (formiminotransferase- cyclodeaminase) (FTCD)...; hepatitis autoantigen, intermediate channeling; 3.42A {Rattus norvegicus} PDB: 2pfd_A
Probab=53.52 E-value=1.3e+02 Score=36.01 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 001026 1077 FCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGE 1115 (1184)
Q Consensus 1077 f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGE 1115 (1184)
+.+.|++.++.+++..+.|..+.++-.+.|..++.-|+-
T Consensus 387 ~e~~m~~i~~~~~~l~~~Ll~LiDeDaeAF~~vm~AykL 425 (541)
T 1tt9_A 387 LDSTMRRLIPPFHAASAQLTSLVDADARAFAACLGAIKL 425 (541)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344555555555555555555555555666666666653
No 124
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=53.42 E-value=49 Score=38.07 Aligned_cols=45 Identities=24% Similarity=0.393 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHH
Q 001026 1092 VRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFV 1137 (1184)
Q Consensus 1092 l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk 1137 (1184)
...|.+.+..+.+.+.++...+++-... ....|...|..++..+.
T Consensus 248 ~~~Ls~aL~~l~~~~e~i~~l~~~Qa~~-d~~~L~E~L~~Y~~ll~ 292 (386)
T 4akv_A 248 SEALNSAISHTGRTYEAIGEMFAEQPKN-DLFQMLDTLSLYQGLLS 292 (386)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHGGGT-THHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 3457777777777777777777765433 33344444444444443
No 125
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=53.12 E-value=1.5e+02 Score=31.67 Aligned_cols=17 Identities=29% Similarity=0.425 Sum_probs=6.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001026 1046 LAEEMQAISKGLEKVVQ 1062 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~ 1062 (1184)
+.+++..+++.|.++.+
T Consensus 26 ~E~~~~~l~~~l~kl~k 42 (265)
T 2q12_A 26 FEEDATAISNYMNQLYQ 42 (265)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444433333
No 126
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=52.45 E-value=68 Score=34.47 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1124 QVVSTLLNFVKMFVLAHEENCRQLE 1148 (1184)
Q Consensus 1124 ~ff~~l~~F~~~fk~a~ee~~k~~e 1148 (1184)
..+.-+.+|+..|....+...||..
T Consensus 117 ~~l~Pl~~l~~~f~~i~k~I~KR~~ 141 (243)
T 4a3a_A 117 GSLLTLDTYLGQFPDIKNRIAKRSR 141 (243)
T ss_dssp THHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHChHHHHHHHHhcc
Confidence 3455666666666666655554443
No 127
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=52.33 E-value=46 Score=36.69 Aligned_cols=10 Identities=10% Similarity=0.062 Sum_probs=5.2
Q ss_pred cchHHHHHHH
Q 001026 1031 KMTLMHYLCK 1040 (1184)
Q Consensus 1031 k~TLLhflvk 1040 (1184)
-.+||.|+-.
T Consensus 16 v~~lL~r~K~ 25 (279)
T 3qwe_A 16 VDAALEYAKT 25 (279)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555544
No 128
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=52.27 E-value=51 Score=30.37 Aligned_cols=28 Identities=25% Similarity=0.362 Sum_probs=15.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSV 1102 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~ 1102 (1184)
..|...|+.|.+....++..|...+..+
T Consensus 12 r~Fa~~L~~F~d~Lq~~~~~L~~~f~~L 39 (94)
T 3fx7_A 12 REFVGHLERFKELLREEVNSLSNHFHNL 39 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455566666655555555555555444
No 129
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} SCOP: d.92.1.0 PDB: 1wgz_A
Probab=51.92 E-value=19 Score=43.09 Aligned_cols=38 Identities=13% Similarity=-0.043 Sum_probs=28.5
Q ss_pred HHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001026 1104 RNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHE 1141 (1184)
Q Consensus 1104 ~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~e 1141 (1184)
..|+.|+.-|-.+-....++.+|+.|..++..+.+.+.
T Consensus 163 ~~YDaLLd~yEpg~t~~~ld~iF~~Lk~~l~~Ll~~i~ 200 (509)
T 3hoa_A 163 ELYDALLDGYEPGMRARELLPLFAELKEGLKGLLDRIL 200 (509)
T ss_dssp SHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45888998887776666778888888888776665553
No 130
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=51.82 E-value=60 Score=29.83 Aligned_cols=62 Identities=16% Similarity=0.095 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001026 1046 LAEEMQAISKGLEKVVQELTASENDGEVSGNFCK--LLKEFLSYAEGEVRSLALLYSSVGRNADALAQ 1111 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~--~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~ 1111 (1184)
...+.+.+.+.+..+..|+...... |+|.+ ++..-++.+.++|+.+.+.+...+..|+..+.
T Consensus 21 ~a~~~~~lk~E~~~lk~E~~stSaQ----DeFAKWaKL~Rk~DKl~~ele~l~~~l~~~k~~F~~~~~ 84 (93)
T 3sjb_C 21 LSKKYLAKVKERHELKEFNNSISAQ----DNYAKWTKNNRKLDSLDKEINNLKDEIQSENKAFQAHLH 84 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTT----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred hHHHHHHHHHHHHHHHHHHhccchH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567788888888888888765432 67764 67777788888888888888888877776544
No 131
>1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1
Probab=50.86 E-value=2.4e+02 Score=32.78 Aligned_cols=12 Identities=17% Similarity=0.227 Sum_probs=8.4
Q ss_pred hhcCcCccCCCC
Q 001026 1173 LVQNPLKSSTIK 1184 (1184)
Q Consensus 1173 ~~q~~~~~~~~~ 1184 (1184)
++....|||+||
T Consensus 455 ELAe~fKGKKIR 466 (602)
T 1cii_A 455 EMAGQAKGKKIR 466 (602)
T ss_dssp HHHHTTTTCBCC
T ss_pred HHHHhcCCCccC
Confidence 344568899887
No 132
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=50.85 E-value=60 Score=38.16 Aligned_cols=10 Identities=10% Similarity=-0.210 Sum_probs=5.1
Q ss_pred HHHHHHHHHH
Q 001026 1045 FLAEEMQAIS 1054 (1184)
Q Consensus 1045 ~L~~El~~l~ 1054 (1184)
++..|++.+.
T Consensus 325 eF~~Eve~L~ 334 (487)
T 3oja_A 325 TERLECEREN 334 (487)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4555555443
No 133
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=50.57 E-value=1.2e+02 Score=34.91 Aligned_cols=8 Identities=25% Similarity=0.331 Sum_probs=0.0
Q ss_pred hhhhcCCC
Q 001026 999 GNALNHGT 1006 (1184)
Q Consensus 999 GN~LN~gt 1006 (1184)
|+=|+..+
T Consensus 10 ~~~~~~~~ 17 (407)
T 4h8s_A 10 GVDLGTEN 17 (407)
T ss_dssp --------
T ss_pred cCCCCcch
Confidence 34444443
No 134
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=47.44 E-value=1.8e+02 Score=34.35 Aligned_cols=36 Identities=8% Similarity=0.191 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001026 1078 CKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYF 1113 (1184)
Q Consensus 1078 ~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yF 1113 (1184)
.+.|+.-++..+.++..+...+++..+.+++...|.
T Consensus 123 i~~Iq~slk~~Q~Qi~en~n~~~~~~~~~e~~~~~i 158 (464)
T 1m1j_B 123 VNMIDNKLVKTQKQRKDNDIILSEYNTEMELHYNYI 158 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Confidence 344555555555555555555555444444444443
No 135
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=47.34 E-value=1.8e+02 Score=33.89 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 001026 1050 MQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGE 1115 (1184)
Q Consensus 1050 l~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGE 1115 (1184)
=+.+.+.|++|++.|............+...|.+.+..-.+..+..++.|.++.+..+.=+.|+-+
T Consensus 60 erdv~~rI~kLkn~L~~~s~s~~~s~~y~~~~~~~lk~~~~q~~dndn~~~e~S~eLe~ri~yIK~ 125 (491)
T 1m1j_A 60 DQNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQ 125 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHHH
Confidence 345666677777766665544444567777888888888888888887777777666665555544
No 136
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=46.96 E-value=1.4e+02 Score=28.80 Aligned_cols=20 Identities=30% Similarity=0.496 Sum_probs=8.4
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 001026 1046 LAEEMQAISKGLEKVVQELT 1065 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~ 1065 (1184)
|.++++.+.+.++....+|+
T Consensus 16 L~~D~~s~~~eleEnqeEL~ 35 (167)
T 4gkw_A 16 LKQDTESLQKQLEENQEELE 35 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444433
No 137
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=45.83 E-value=89 Score=36.65 Aligned_cols=61 Identities=13% Similarity=0.211 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001026 1052 AISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQY 1112 (1184)
Q Consensus 1052 ~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~y 1112 (1184)
.+.++|+.++..|+..++.......+.+.|+.-+...+..+..-+...++-.+..++...|
T Consensus 92 ~V~~dl~~Le~~l~~isn~Ts~a~~~v~~ik~s~~~~q~~~~~n~~~~~~s~~mle~~~~~ 152 (461)
T 3ghg_B 92 PIRNSVDELNNNVEAVSQTSSSSFQYMYLLKDLWQKRQKQVKDNENVVNEYSSELEKHQLY 152 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHTH
T ss_pred chhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccccCCCCcchhHHHHHHHHHHHHHHH
Confidence 3344444444444333332212234445555555555544443333333333344444333
No 138
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=45.65 E-value=1.5e+02 Score=30.29 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=14.3
Q ss_pred chhHHHHHHHHHHHhhhhcCC
Q 001026 985 SIKLKRIMQTILSLGNALNHG 1005 (1184)
Q Consensus 985 S~~L~~lL~~IL~iGN~LN~g 1005 (1184)
..+++-+-+.|..|-.-||.-
T Consensus 45 gtkwrvvaqhikdicsdlnqi 65 (294)
T 3caz_A 45 GTKWRVVAQHIKDICSDLNQI 65 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHTSS
T ss_pred CcchhHHHHHHHHHHHHHHHH
Confidence 356777777777776666654
No 139
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=45.43 E-value=97 Score=28.55 Aligned_cols=32 Identities=16% Similarity=0.080 Sum_probs=21.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1076 NFCKLLKEFLSYAEGEVRSLALLYSSVGRNAD 1107 (1184)
Q Consensus 1076 ~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~ 1107 (1184)
.+.+.|+.|.+.+.+.|.-|.++++-+++.|-
T Consensus 56 ~l~s~l~~f~e~a~e~vp~L~~~i~vle~~~~ 87 (94)
T 3fx7_A 56 NLKSTFNEFDEAAQEQIAWLKERIRVLEEDYL 87 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHhHHHHHHHHHhHHHHH
Confidence 44566667777777777777777766666543
No 140
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=44.99 E-value=27 Score=34.40 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=37.9
Q ss_pred cHHHHHHHHhhhC-CCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhcCCCcE
Q 001026 43 YLGGIVGQLREYF-PEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSLGHQNV 121 (1184)
Q Consensus 43 ~i~dV~~fL~~~H-~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~d~~NV 121 (1184)
..+++.+.|++.- .+ ++.|+..++.+|.. ....+. .++|.. .. . + ..+..+..||....+.+
T Consensus 8 s~~el~~~l~~~~~~~-~~~lIDvR~~ey~~------gHIpGA-inip~~--~l---~-~---~~~~~l~~~l~~~~~~~ 70 (152)
T 2j6p_A 8 KPEELVELLDNPDSLV-KAAVIDCRDSDRDC------GFIVNS-INMPTI--SC---T-E---EMYEKLAKTLFEEKKEL 70 (152)
T ss_dssp CHHHHHHHHHSHHHHH-TEEEEECCSTTGGG------CBCTTC-EECCTT--TC---C-H---HHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHhCCCCCC-CEEEEEcCcHHhCc------CcCCCc-EECChh--Hh---h-H---HHHHHHHHHhcccCCCE
Confidence 4566677775420 12 38999998763221 122233 234332 10 0 1 12344566776545568
Q ss_pred EEEEecCCCCC
Q 001026 122 LLMHCERGGWP 132 (1184)
Q Consensus 122 vvvHCk~Gkgr 132 (1184)
||+||..++.|
T Consensus 71 vV~yC~~sg~r 81 (152)
T 2j6p_A 71 AVFHCAQSLVR 81 (152)
T ss_dssp EEEECSSSSSH
T ss_pred EEEEcCCCCCc
Confidence 99999544455
No 141
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=44.45 E-value=1.7e+02 Score=26.11 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHH
Q 001026 1046 LAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALL 1098 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~ 1098 (1184)
...+|+.+...|......|..... +...+.|...+..|...+....+.|.+.
T Consensus 23 ~~~~i~~~l~~L~~~~~~l~~~W~-G~a~~aF~~~~~~~~~~~~~~~~~L~~i 74 (98)
T 3gwk_C 23 GSQQVTEVLNLLTQEQAVIDENWD-GSTFDSFEAQFNELSPKITEFAQLLEDI 74 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHBC-SSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcccC-cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444443 4455777777776666555544444433
No 142
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=43.94 E-value=3e+02 Score=32.09 Aligned_cols=24 Identities=13% Similarity=0.027 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1081 LKEFLSYAEGEVRSLALLYSSVGR 1104 (1184)
Q Consensus 1081 m~~Fl~~a~~~l~~L~~~~~~~~~ 1104 (1184)
|..+++..+....+++.+.++++.
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~ 435 (487)
T 3oja_A 412 LRAIVKRYEEMYVEQQSVQNNAIR 435 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchh
Confidence 445555444444444444444333
No 143
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=43.52 E-value=3.3e+02 Score=29.09 Aligned_cols=32 Identities=6% Similarity=-0.102 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1078 CKLLKEFLSYAEGEVRSLALLYSSVGRNADAL 1109 (1184)
Q Consensus 1078 ~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l 1109 (1184)
.+.|..=++.++.++..+++...++.+....+
T Consensus 92 ~~aL~kEie~~~~~i~~lE~eile~~e~ie~~ 123 (256)
T 3na7_A 92 LRSLNIEEDIAKERSNQANREIENLQNEIKRK 123 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666666666666666555543
No 144
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=43.47 E-value=3.2e+02 Score=29.60 Aligned_cols=45 Identities=11% Similarity=0.037 Sum_probs=24.8
Q ss_pred HHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1101 SVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCR 1145 (1184)
Q Consensus 1101 ~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k 1145 (1184)
++-...+.+..|+..-..-.+.++|...|.+|.....+......+
T Consensus 133 ~il~~~~~v~~~l~~l~~~~~~~el~~~~~~f~~~~~~L~~~~~~ 177 (258)
T 3rf3_A 133 KIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDE 177 (258)
T ss_dssp HHHHHHHHHHHHHTTGGGCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334566777777765444445566655555555555444444433
No 145
>3uv4_A Second bromodomain of human transcription initiat TFIID subunit 1 (TAF1); structural genomics consortium, SGC; 1.89A {Homo sapiens} PDB: 3hmh_A
Probab=43.09 E-value=67 Score=32.25 Aligned_cols=24 Identities=17% Similarity=0.159 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCCC
Q 001026 1094 SLALLYSSVGRNADALAQYFGEDP 1117 (1184)
Q Consensus 1094 ~L~~~~~~~~~~~~~l~~yFGEd~ 1117 (1184)
.+.+...+++-.|..+..|.+++.
T Consensus 87 s~~ef~~Dv~Lif~Na~~yN~~~s 110 (158)
T 3uv4_A 87 SRESFLDDVNLILANSVKYNGPES 110 (158)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCC
Confidence 355556667777788888888764
No 146
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=42.93 E-value=97 Score=33.00 Aligned_cols=50 Identities=22% Similarity=0.207 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001026 1088 AEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEE 1142 (1184)
Q Consensus 1088 a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee 1142 (1184)
++++++..+..|.+..+.+...|.-|-+.. .+++..|..|+..-.+-+++
T Consensus 163 ~eeEl~~A~~~fe~~~e~~~~~m~~~~~~~-----~e~l~~l~~~v~aQl~y~~~ 212 (240)
T 2z0v_A 163 PDEEVRQAVEKFEESKELAERSMFNFLEND-----VEQVSQLAVFIEAALDYHRQ 212 (240)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHST-----HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHHHHH
Confidence 466666666677766666655555444321 34555555555544444433
No 147
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=42.89 E-value=3.8e+02 Score=32.52 Aligned_cols=12 Identities=33% Similarity=0.163 Sum_probs=5.9
Q ss_pred hhhHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLS 1086 (1184)
Q Consensus 1075 d~f~~~m~~Fl~ 1086 (1184)
..|.+.|...++
T Consensus 378 ~~~~~~L~~~i~ 389 (592)
T 1f5n_A 378 HLFQKELAAQLE 389 (592)
T ss_dssp GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 445555544444
No 148
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=42.73 E-value=77 Score=41.46 Aligned_cols=23 Identities=4% Similarity=-0.054 Sum_probs=14.1
Q ss_pred HHHHHHHHHhhcCcCcCCCCchh
Q 001026 331 IEAFAKVQEIFSNVDWLDPKLDV 353 (1184)
Q Consensus 331 ~e~f~~~~~~~~~~~~~~~~~~~ 353 (1184)
.+.|.++.+.|.-+...+...+.
T Consensus 302 ~~~f~~~~~A~~~lg~~~~e~~~ 324 (1080)
T 2dfs_A 302 AKEMVNTRQACTLLGISDSYQMG 324 (1080)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHH
Confidence 47788877776666555444333
No 149
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=41.07 E-value=3.5e+02 Score=28.66 Aligned_cols=66 Identities=12% Similarity=0.027 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLEFERKKA 1154 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~e~ekkk~ 1154 (1184)
.++.|..+.+.+.+.|++...++++.-++ .. ........++..--.++.+.+++-++++..|+||+
T Consensus 120 ~~K~y~~e~k~~~~~leK~~~elkK~~rk--------sq-k~~~k~~e~v~~~q~el~~f~~~s~r~Al~EErRR 185 (222)
T 3ok8_A 120 SCQHYEIEYRHRAANLEKCMSELWRMERK--------RD-KNAREMKESVNRLHAQMQAFVSESKRAAELEEKRR 185 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------TC-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHhhhh--------hc-cChHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 45555566666666655544444443322 11 23344566677777777777777776666665553
No 150
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=40.95 E-value=1.5e+02 Score=32.17 Aligned_cols=26 Identities=15% Similarity=0.134 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1129 LLNFVKMFVLAHEENCRQLEFERKKA 1154 (1184)
Q Consensus 1129 l~~F~~~fk~a~ee~~k~~e~ekkk~ 1154 (1184)
...++..+.+-++...++.+.+-+|+
T Consensus 118 d~k~~~~~~K~~~~~~k~~r~elkk~ 143 (253)
T 2d1l_A 118 WKKVANQLDKDHAKEYKKARQEIKKK 143 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 33333333333333333334443333
No 151
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=40.09 E-value=2.1e+02 Score=30.91 Aligned_cols=18 Identities=11% Similarity=0.224 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 001026 1096 ALLYSSVGRNADALAQYF 1113 (1184)
Q Consensus 1096 ~~~~~~~~~~~~~l~~yF 1113 (1184)
...++.++...+.+..-|
T Consensus 83 ~~~~r~ie~~l~~~~~~~ 100 (253)
T 2ykt_A 83 AEVHRQIQNQLEEMLKSF 100 (253)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444444444433
No 152
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=39.93 E-value=1.9e+02 Score=28.57 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYS 1100 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~ 1100 (1184)
+-+.+.+..|++++.+.+..|+..+.
T Consensus 40 ~~~~ell~~Fl~d~~~~l~~L~~al~ 65 (153)
T 3us6_A 40 EFVFEVVSLFFDDSERILKDLSFAVD 65 (153)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999887764
No 153
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=39.87 E-value=1e+02 Score=32.77 Aligned_cols=15 Identities=20% Similarity=0.191 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHH
Q 001026 1129 LLNFVKMFVLAHEEN 1143 (1184)
Q Consensus 1129 l~~F~~~fk~a~ee~ 1143 (1184)
+.+|+..|....+..
T Consensus 117 l~~~~~~~~~i~k~I 131 (237)
T 4avm_A 117 MEIYVAQFSEIKERI 131 (237)
T ss_dssp HHHHHHTHHHHHHHH
T ss_pred HHHHHHHhHHHHHHH
Confidence 444444444444333
No 154
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=39.80 E-value=1.4e+02 Score=31.24 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1125 VVSTLLNFVKMFVLAHEENCRQL 1147 (1184)
Q Consensus 1125 ff~~l~~F~~~fk~a~ee~~k~~ 1147 (1184)
|+.-|.+|+..|+...+...||.
T Consensus 117 vi~Pl~~~~~~~~~i~~~ikKR~ 139 (244)
T 1uru_A 117 VLIPLNTYTGQFPEMKKKVEKRN 139 (244)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666665555544433
No 155
>2dnx_A Syntaxin-12; snare, HABC domain, UP and DOWN three helix bundle, LEFT-handed twist, membrane fusion, vesicle transport, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.33 E-value=2.7e+02 Score=26.81 Aligned_cols=91 Identities=10% Similarity=0.001 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHH
Q 001026 1046 LAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQV 1125 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~f 1125 (1184)
+...|..+...+..+++.+....... ....++++|......+...++ ++.+..++|..+......... ..-
T Consensus 19 is~~I~~In~~vs~l~r~v~~LGT~k-Dt~~LR~kl~~~~~~t~~l~k-------~ts~~lk~L~~~~~~~~~~~~-r~~ 89 (130)
T 2dnx_A 19 CSGNIQRISQATAQIKNLMSQLGTKQ-DSSKLQENLQQLQHSTNQLAK-------ETNELLKELGSLPLPLSTSEQ-RQQ 89 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSS-CCHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHSCCCSSHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHhcccccccchH-HHH
Confidence 44455556666666666555554422 234555665555555544444 444444444444311000000 011
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 001026 1126 VSTLLNFVKMFVLAHEENCR 1145 (1184)
Q Consensus 1126 f~~l~~F~~~fk~a~ee~~k 1145 (1184)
--....+.++|..++.++.+
T Consensus 90 k~q~~KL~~dF~~~L~~FQ~ 109 (130)
T 2dnx_A 90 RLQKERLMNDFSAALNNFQA 109 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 11345566777777776654
No 156
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=39.19 E-value=1.1e+02 Score=28.57 Aligned_cols=82 Identities=10% Similarity=0.119 Sum_probs=46.3
Q ss_pred hccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhc-CCC
Q 001026 41 KEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSL-GHQ 119 (1184)
Q Consensus 41 RN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~-d~~ 119 (1184)
.-..+++.+.|++...+ +.|..+++...+.. . + +.| |.-..+++.|. .|+.. +.+
T Consensus 16 ~is~~el~~~l~~~~~~--~~liDvR~~~e~~~------~--g---hIp----gA~nip~~~l~-------~~~~~l~~~ 71 (124)
T 3flh_A 16 YIDHHTVLADMQNATGK--YVVLDVRNAPAQVK------K--D---QIK----GAIAMPAKDLA-------TRIGELDPA 71 (124)
T ss_dssp EECHHHHHHHHHHTCCC--EEEEECCCSCHHHH------C--C---EET----TCEECCHHHHH-------HHGGGSCTT
T ss_pred eecHHHHHHHHHcCCCC--EEEEECCCHHHHHh------c--C---cCC----CCEECCHHHHH-------HHHhcCCCC
Confidence 35677888888775433 99999987532200 0 1 111 21112444433 34443 556
Q ss_pred cEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 120 NVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 120 NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
.-+||+|..|. |..+..++.+|...|+
T Consensus 72 ~~ivvyC~~g~-r~~s~~a~~~L~~~G~ 98 (124)
T 3flh_A 72 KTYVVYDWTGG-TTLGKTALLVLLSAGF 98 (124)
T ss_dssp SEEEEECSSSS-CSHHHHHHHHHHHHTC
T ss_pred CeEEEEeCCCC-chHHHHHHHHHHHcCC
Confidence 78999997654 4235666666766654
No 157
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=37.20 E-value=3.3e+02 Score=27.16 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1123 EQVVSTLLNFVKMFVLAHEENCRQLEFERKKAEKAV 1158 (1184)
Q Consensus 1123 e~ff~~l~~F~~~fk~a~ee~~k~~e~ekkk~ekea 1158 (1184)
..+..+|.+|...++....+..+..++-++|.++-.
T Consensus 99 ~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~ 134 (152)
T 4fla_A 99 RQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVT 134 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788888988888888888887777776665543
No 158
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=36.99 E-value=58 Score=43.04 Aligned_cols=94 Identities=14% Similarity=0.167 Sum_probs=47.3
Q ss_pred HHHHHHHhhhCCCCcEEEEEeccCCcCc--ccccccccCCceEEe-cCCCCCCCC---CCcHHHHHHHHHHHHHHHhcCC
Q 001026 45 GGIVGQLREYFPEASFMVFNFREGEHQS--QIGQVLSEYDMTVMD-YPRHYEGCP---LLTMETVHHFLRSSESWLSLGH 118 (1184)
Q Consensus 45 ~dV~~fL~~~H~~~~y~V~Nl~ee~~~~--~~~~~~~~f~~~V~~-~P~~~~~~p---~p~L~~l~~~c~~i~~WL~~d~ 118 (1184)
..|+.-|+.||.. -+||-.++.-.-. .+.. +..|+..++. | .|+. .| -.|+.+-..++.-|..+.
T Consensus 97 ~~vl~~L~~Ry~~--~~iyT~~g~~li~vNP~~~-l~~y~~~~~~~y----~~~~~~~~~--PHi~aia~~ay~~m~~~~ 167 (1184)
T 1i84_S 97 ASVLHNLRERYFS--GLIYTYSGLFCVVINPYKQ-LPIYSEKIIDMY----KGKKRHEMP--PHIYAIADTAYRSMLQDR 167 (1184)
T ss_dssp THHHHHHHHHHHH--TCCEEEETTEEEEECCCSC-CSCCSHHHHHHH----SSCCSSSSC--CCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcC--CCcEEecCcceeeeCCCcC-CCCCCHHHHHHh----cCcccccCC--ccHhhhHHHHHHHHHhcC
Confidence 4578889888865 4677665442110 0000 1223333222 2 1211 12 147777777776666644
Q ss_pred C-cEEEEEecCCCCCc-hHHHHHHHHHHhhC
Q 001026 119 Q-NVLLMHCERGGWPV-LAFMLAALLIYRKQ 147 (1184)
Q Consensus 119 ~-NVvvvHCk~Gkgr~-tg~mia~yLly~~~ 147 (1184)
+ -.++|--+.|-|-+ +.=.|--||.+...
T Consensus 168 ~~Q~i~isGeSGaGKTe~~k~~~~yla~~~~ 198 (1184)
T 1i84_S 168 EDQSILCTGESGAGKTENTKKVIQYLAVVAS 198 (1184)
T ss_dssp CCEEEECCCSTTSSTTHHHHHHHHHHHHHSS
T ss_pred CCcEEEEecCCCCCccHHHHHHHHHHHHHhc
Confidence 4 45666666665552 22355556665543
No 159
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=36.96 E-value=1.8e+02 Score=25.63 Aligned_cols=49 Identities=16% Similarity=0.182 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHH
Q 001026 1047 AEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLA 1096 (1184)
Q Consensus 1047 ~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~ 1096 (1184)
.++|+.+...|......|..... +...+.|...+..|...+....+.|.
T Consensus 25 ~~~i~~~l~~L~~~v~~L~~~W~-G~a~~af~~~~~~~~~~~~~~~~~L~ 73 (99)
T 3zbh_A 25 SSNVTELIARLDQMSHTLQGIWE-GASSEAFIQQYQELRPSFEKMAVLLN 73 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC-SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc-ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444433444433333433332 33446666666665555444443333
No 160
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=36.85 E-value=1e+02 Score=29.00 Aligned_cols=30 Identities=10% Similarity=-0.001 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 001026 1085 LSYAEGEVRSLALLYSSVGRNADALAQYFG 1114 (1184)
Q Consensus 1085 l~~a~~~l~~L~~~~~~~~~~~~~l~~yFG 1114 (1184)
+++-.+++..|++...++.+.|.++.....
T Consensus 16 i~eR~~eI~~Ie~~I~eL~~iF~dla~lV~ 45 (109)
T 3hd7_B 16 IETRHSEIIKLENSIRELHDMFMDMAMLVE 45 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666666666666665554443
No 161
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=36.82 E-value=1.6e+02 Score=31.51 Aligned_cols=53 Identities=17% Similarity=0.119 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1088 AEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCR 1145 (1184)
Q Consensus 1088 a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k 1145 (1184)
++++++..+..|+...+.....+.-|-+.. .+++..|..|+..-.+-+++..+
T Consensus 179 ~eeEle~A~~~fe~~~e~~~~~m~~l~~~e-----~e~~~~L~~~v~aQl~y~~~~~e 231 (256)
T 1zww_A 179 PDEELRQALEKFDESKEIAESSMFNLLEMD-----IEQVSQLSALVQAQLEYHKQAVQ 231 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 466677777777766665555544443321 24556666665555544444433
No 162
>2xhe_B Syntaxin1; exocytosis, exocytosis complex, snare, neuro fusion, SM PROT choanoflagellates; 2.80A {Monosiga brevicollis}
Probab=36.58 E-value=4.4e+02 Score=28.45 Aligned_cols=62 Identities=11% Similarity=0.119 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1045 FLAEEMQAISKGLEKVVQELTASENDGEVSG--NFCKLLKEFLSYAEGEVRSLALLYSSVGRNA 1106 (1184)
Q Consensus 1045 ~L~~El~~l~k~L~kv~~el~~s~~d~~~~d--~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~ 1106 (1184)
.+..+|..+...|.++.+.....-......+ .....|..........+..+...++.+....
T Consensus 52 ~I~~~I~~i~~~l~~L~~l~~~~l~t~~~~~~~~~~~~ie~l~~~i~~~~~~i~~~lk~l~~~~ 115 (279)
T 2xhe_B 52 RIRDNIEDIEQAIEQVAQLHTESLVAVSKEDRDRLNEKLQDTMARISALGNKIRADLKQIEKEN 115 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555544433211111111 2344555555555555555555555554433
No 163
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=35.87 E-value=1.1e+02 Score=34.92 Aligned_cols=44 Identities=11% Similarity=0.240 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHH
Q 001026 1093 RSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFV 1137 (1184)
Q Consensus 1093 ~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk 1137 (1184)
..|.+.+..+.+.+..+..++.+-... ....|...|..++..+.
T Consensus 229 ~~L~~al~~l~~~~~~i~~l~~~qa~~-d~~~l~E~L~~Y~~~l~ 272 (366)
T 3dyt_A 229 TDLNDAITEAGKTYEEIASLVAEQPKK-DLHFLMECNHEYKGFLG 272 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSGGG-THHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHH
Confidence 456777777777777777777765433 23344444554444443
No 164
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis} SCOP: d.92.1.0
Probab=35.85 E-value=37 Score=40.44 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=23.1
Q ss_pred HHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001026 1104 RNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAH 1140 (1184)
Q Consensus 1104 ~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ 1140 (1184)
..|+.|+.-|-.+-....++.+|+.|..++..+.+.+
T Consensus 152 ~pYDaLLd~yEpg~t~~~ld~iF~~Lk~~l~~Li~~i 188 (501)
T 3hq2_A 152 HPYDALLDLFEPGVTVKVLDQLFAELKEAIIPLVKQV 188 (501)
T ss_dssp CTTHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466666666555444456777887777766655444
No 165
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=35.84 E-value=4.1e+02 Score=30.72 Aligned_cols=28 Identities=11% Similarity=0.182 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001026 1042 QLKFLAEEMQAISKGLEKVVQELTASEN 1069 (1184)
Q Consensus 1042 ~L~~L~~El~~l~k~L~kv~~el~~s~~ 1069 (1184)
+|+.+.+||+++...+..+.+.+..+.+
T Consensus 42 ~LE~~l~elsn~ts~v~~Lvk~iq~~~~ 69 (409)
T 1m1j_C 42 EIEGLLQQATNSTGSIEYLIQHIKTIYP 69 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3455556666666777777766666544
No 166
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=35.72 E-value=1.9e+02 Score=29.90 Aligned_cols=48 Identities=10% Similarity=0.121 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1093 RSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEEN 1143 (1184)
Q Consensus 1093 ~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~ 1143 (1184)
+.++++|+.+++.-..+..+..+.... ++.+..+.++=..+.++...+
T Consensus 107 Ell~eL~~~Ck~~qp~i~~Li~e~~dd---ee~L~elL~~ND~Ln~vl~kY 154 (186)
T 1oxz_A 107 DLMKELYQRCERMRPTLFRLASDTEDN---DEALAEILQANDNLTQVINLY 154 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCSC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCC---HHHHHHHHHhhHHHHHHHHHH
Confidence 445555555555555555555432211 455555555555555555544
No 167
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=35.45 E-value=2.3e+02 Score=24.86 Aligned_cols=58 Identities=14% Similarity=0.207 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1046 LAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGR 1104 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~ 1104 (1184)
...+|+.+...|......|.... .+...+.|...+..|...+....+.|...-..+.+
T Consensus 21 ~~~~l~~~l~~L~~~~~~L~~~W-~G~a~~af~~~~~~~~~~~~~~~~~L~~i~~~L~~ 78 (97)
T 2vs0_A 21 GSDQIRQILSDLTRAQGEIAANW-EGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNS 78 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444443 34556788888877776666555554444444433
No 168
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=35.31 E-value=5.8e+02 Score=29.51 Aligned_cols=21 Identities=24% Similarity=0.181 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001026 1128 TLLNFVKMFVLAHEENCRQLE 1148 (1184)
Q Consensus 1128 ~l~~F~~~fk~a~ee~~k~~e 1148 (1184)
....|...|+....|..+|+.
T Consensus 330 ~Y~~f~~aY~~lL~Ev~RRr~ 350 (413)
T 4hpq_C 330 FYANFERSYHNLLKEVKRRKE 350 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444555554444444433
No 169
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=35.24 E-value=1.7e+02 Score=36.40 Aligned_cols=101 Identities=14% Similarity=0.099 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCC------------c--cchhhHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q 001026 1042 QLKFLAEEMQAISKGLEKVVQELTASENDG------------E--VSGNFCKLLK----EFLSYAEGEVRSLALLYSSVG 1103 (1184)
Q Consensus 1042 ~L~~L~~El~~l~k~L~kv~~el~~s~~d~------------~--~~d~f~~~m~----~Fl~~a~~~l~~L~~~~~~~~ 1103 (1184)
.|+.+.++++.|+..-..+.++|....+|. . ..+-|.+.|. .+.+.....+..-++++.++.
T Consensus 557 ~L~~~l~~l~~l~~~R~~~~~~lk~~~ddI~~~ll~~~~~~~~~~~e~lf~~eL~k~~~~~~~~i~~~~~~Q~~ll~~i~ 636 (704)
T 2xs1_A 557 VLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQ 636 (704)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCccHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666666666656666665432211 1 1123444443 333333333444444555555
Q ss_pred HHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001026 1104 RNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEE 1142 (1184)
Q Consensus 1104 ~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee 1142 (1184)
....++..-.+.+.....-+.++..|.+....|+..+..
T Consensus 637 ~~~~~f~~~~~~~~~~~~re~~~~~l~~ay~~y~el~~~ 675 (704)
T 2xs1_A 637 VSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVAN 675 (704)
T ss_dssp HHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555554444332223356666666666555555443
No 170
>1ykh_A RNA polymerase II mediator complex protein MED7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.2 PDB: 1yke_A
Probab=35.23 E-value=1.3e+02 Score=28.41 Aligned_cols=29 Identities=21% Similarity=0.174 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCCCCCC
Q 001026 1091 EVRSLALLYSSVGRNADALAQYFGEDPAR 1119 (1184)
Q Consensus 1091 ~l~~L~~~~~~~~~~~~~l~~yFGEd~~~ 1119 (1184)
++++|.++...+--.|-+|+.-++.++..
T Consensus 18 k~~ELkkLn~SlL~nfLeLl~~l~~~P~~ 46 (108)
T 1ykh_A 18 KIQELRKLLKSLLLNYLELIGVLSINPDM 46 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCch
Confidence 44566777777777888888888887753
No 171
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=35.08 E-value=1.3e+02 Score=31.81 Aligned_cols=75 Identities=15% Similarity=0.209 Sum_probs=41.8
Q ss_pred hHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHhhhccCC-ccchhhHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 001026 1033 TLMHYLCKI------QLKFLAEEMQAISKGLEKVVQELTASENDG-EVSGNFCKLLKEFLSYAEGEVRSLA-LLYSSVGR 1104 (1184)
Q Consensus 1033 TLLhflvki------~L~~L~~El~~l~k~L~kv~~el~~s~~d~-~~~d~f~~~m~~Fl~~a~~~l~~L~-~~~~~~~~ 1104 (1184)
.|++|+... ....|.++.+.+...+.++..+++...++. ........++...+++-+.+|+.|+ .+..++++
T Consensus 125 elfd~~~~~~~~~~~~~~~L~~e~~~l~~~~~~l~~qlE~~v~~K~~~E~~L~~KF~~lLNeKK~KIR~lq~~Ll~~~~~ 204 (213)
T 1ik9_A 125 ELIAYALDTIAENQAKNEHLQKENERLLRDWNDVQGRFEKAVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQE 204 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 557777662 234455566666666666666555543321 1123344555556677777788877 55555555
Q ss_pred HHH
Q 001026 1105 NAD 1107 (1184)
Q Consensus 1105 ~~~ 1107 (1184)
.-+
T Consensus 205 ~~~ 207 (213)
T 1ik9_A 205 REK 207 (213)
T ss_dssp HHH
T ss_pred hhh
Confidence 443
No 172
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=34.37 E-value=3.5e+02 Score=26.66 Aligned_cols=89 Identities=9% Similarity=0.077 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCCCCCCCC
Q 001026 1046 LAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQ----YFGEDPARCP 1121 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~----yFGEd~~~~~ 1121 (1184)
|...+..|..-++.+++.+....- .......+.+.+=++.|..+|+.+++.+...+-.++++.+ -.||+
T Consensus 26 LvtkVDDLQD~VE~LRkDV~~Rgv--rP~~~ql~~v~kdi~~a~~eL~~m~~~i~~ekP~WKKiWE~EL~~VceE----- 98 (141)
T 3okq_A 26 LLSKVDDLQDVIEIMRKDVAERRS--QPAKKKLETVSKDLENAQADVLKLQEFIDTEKPHWKKTWEAELDKVCEE----- 98 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred HHHHHhHHHHHHHHHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHH-----
Confidence 333334444444444444433221 2234556677777888888888888888877766655442 33332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001026 1122 FEQVVSTLLNFVKMFVLAHEE 1142 (1184)
Q Consensus 1122 ~e~ff~~l~~F~~~fk~a~ee 1142 (1184)
.+||..-.+++.+++.-++.
T Consensus 99 -Qqfl~~QedL~~DL~eDL~k 118 (141)
T 3okq_A 99 -QQFLTLQEELILDLKEDLGK 118 (141)
T ss_dssp -HHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHH
Confidence 57777766666666554443
No 173
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=34.31 E-value=1.8e+02 Score=36.86 Aligned_cols=191 Identities=14% Similarity=0.075 Sum_probs=0.0
Q ss_pred CchhhhhhhhhhccchHHH------------HHcchhHHHHHHHHHHHhhhhcCCCCCcceeeeeccchhchhcccccCC
Q 001026 963 PRVESKLRVFSFKIQFQTQ------------VRNSIKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNN 1030 (1184)
Q Consensus 963 Prl~~RL~~l~fk~~F~~~------------L~~S~~L~~lL~~IL~iGN~LN~gt~rG~A~GFkL~SL~KL~dtKs~d~ 1030 (1184)
+.++.+|+.+++...--.. |..+..+++.|+-+|. -|||..+.++...++......-+..+++
T Consensus 222 ~~L~~~Le~iv~~a~~~aDs~~t~~~~Re~Iv~~C~~vrq~L~dLl~--~~~~~~g~~~~s~~l~~ai~~l~~k~~d--- 296 (832)
T 4igg_A 222 PSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLS--EYMGNAGRKERSDALNSAIDKMTKKTRD--- 296 (832)
T ss_dssp HHHHHHHHHHHHHHHHHHSSTTSCHHHHHHHHHHHHHHHHHHHHHHH--HHHTCSSCSCCHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHH--HHhhccccccCChHHHHHHHHHHHHHHH---
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHH------------------
Q 001026 1031 KMTLMHYLCKIQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEV------------------ 1092 (1184)
Q Consensus 1031 k~TLLhflvki~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l------------------ 1092 (1184)
|-..|.+..+..+.+.+-+...-|..+...... +..+.|.+....|-+.++.-+
T Consensus 297 ---L~r~L~~AvvdqvsD~F~dt~~pL~~Li~Aa~~-----g~ee~~~e~a~~F~eha~~lvevA~Lv~~~s~ne~~v~~ 368 (832)
T 4igg_A 297 ---LRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKN-----GNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKL 368 (832)
T ss_dssp ---HHHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHT-----TCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHc-----CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHH
Q ss_pred -----HHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH
Q 001026 1093 -----RSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEE------NCRQLEFERKKAEKAVENE 1161 (1184)
Q Consensus 1093 -----~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee------~~k~~e~ekkk~ekeaeke 1161 (1184)
..|+.+.-++-+...-|+.|=+-..+...++.|...|.+=+..+..++++ +++.-+++..+--.....+
T Consensus 369 i~~aa~~le~L~PQVI~Aar~L~~~P~Sk~A~Enle~f~~~W~~~v~~L~~avDdi~di~dFL~vSe~~i~~dv~~c~~A 448 (832)
T 4igg_A 369 VRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIA 448 (832)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHhh
Q 001026 1162 KLKTQ 1166 (1184)
Q Consensus 1162 k~k~~ 1166 (1184)
-++.+
T Consensus 449 l~~~~ 453 (832)
T 4igg_A 449 LQEKD 453 (832)
T ss_dssp HHTTC
T ss_pred HHccC
No 174
>2p61_A Hypothetical protein TM_1646; structural genomics, unknown function, PSI-2, protein structure initiative; 2.70A {Thermotoga maritima MSB8} SCOP: a.24.29.1
Probab=34.12 E-value=2.3e+02 Score=28.51 Aligned_cols=84 Identities=17% Similarity=0.218 Sum_probs=51.7
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHH-------------
Q 001026 1029 NNKMTLMHYLCKIQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSL------------- 1095 (1184)
Q Consensus 1029 d~k~TLLhflvki~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L------------- 1095 (1184)
..+.+|...+.+..-+...++|+++...|...-+.|....+- ..-..|++.++.|++.+....-.+
T Consensus 32 ~~~~~F~~~l~~~~~~~~~e~L~~Ll~~I~~~G~rL~~~~t~-~~l~~YK~lVK~FL~~vv~~~~~l~~~~~~~~G~~r~ 110 (162)
T 2p61_A 32 SKKKEFFDILEDVKEDHFEKLLEEAVEEVIDSGNELVRSPTP-SNLKRYKNAIKEFLKLIEKKIYKLAGSFDMNSGRARL 110 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHHHHCC------CHHHHHH
T ss_pred ccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCH-HHHHHHHHHHHHHHHHHHHhhhhhhhhccccCCCcee
Confidence 445667777776555555677777777777777777665432 122578889999999886655444
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 001026 1096 ALLYSSVGRNADALAQYF 1113 (1184)
Q Consensus 1096 ~~~~~~~~~~~~~l~~yF 1113 (1184)
-..++.+++..++|..-+
T Consensus 111 y~iVk~ID~kL~eLt~~l 128 (162)
T 2p61_A 111 HLVVEEVNEKLMDLTEKI 128 (162)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred EEeehHHhHHHHHHHHHH
Confidence 233344556666666554
No 175
>3r84_A Mediator of RNA polymerase II transcription subun; four-helix bundle, nucleus; HET: MSE; 2.05A {Saccharomyces cerevisiae}
Probab=34.05 E-value=2.5e+02 Score=25.38 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=24.5
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1072 EVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRN 1105 (1184)
Q Consensus 1072 ~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~ 1105 (1184)
...+.|.+..+.|+.....--..|+++...+++.
T Consensus 40 ~~K~~F~~~t~~fy~tL~~v~v~LrkEIk~LdEn 73 (86)
T 3r84_A 40 SVKPQFENHVKQFYERLDKSTTQLRKEIQLLDEN 73 (86)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4557888888888888777766676666666553
No 176
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=34.05 E-value=1.7e+02 Score=27.19 Aligned_cols=55 Identities=9% Similarity=0.051 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1041 IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRN 1105 (1184)
Q Consensus 1041 i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~ 1105 (1184)
..|++|..|+..|+.++.......... ...+..|+..++--.+.....+.++++-
T Consensus 42 rilhdl~seV~~LK~dv~~~L~k~~~e----------~qe~~~FIKa~kvL~~rns~DI~~ire~ 96 (101)
T 4aj5_1 42 RILYDLHSEVQTLKDDINILLDKARLE----------NQEGIDFIKATKVLMEKNSMDIMKIREY 96 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 346677788888877665443332221 1244555655555444444444444443
No 177
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=33.95 E-value=2.2e+02 Score=28.02 Aligned_cols=25 Identities=8% Similarity=-0.033 Sum_probs=13.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1076 NFCKLLKEFLSYAEGEVRSLALLYS 1100 (1184)
Q Consensus 1076 ~f~~~m~~Fl~~a~~~l~~L~~~~~ 1100 (1184)
.++..+..|..+...-+..|+..+.
T Consensus 41 ~lk~~f~~~a~~~~~~~~eL~~~i~ 65 (153)
T 4etr_A 41 QLKAAMLEQSRDCAAAADELERIVL 65 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555555555555554443
No 178
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=33.57 E-value=4.7e+02 Score=27.97 Aligned_cols=6 Identities=17% Similarity=0.113 Sum_probs=2.1
Q ss_pred HHHHHH
Q 001026 1101 SVGRNA 1106 (1184)
Q Consensus 1101 ~~~~~~ 1106 (1184)
++++.|
T Consensus 134 KaKk~Y 139 (301)
T 2efk_A 134 NSKRKF 139 (301)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 179
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=33.57 E-value=4.4e+02 Score=30.90 Aligned_cols=29 Identities=7% Similarity=-0.121 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
.+..-+..+...+....+.+.++++.|..
T Consensus 133 ~~~~~~~k~qk~l~~~~~~l~KaKk~Y~~ 161 (486)
T 3haj_A 133 EAEDGFRKAQKPWAKKLKEVEAAKKAHHA 161 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444444444444443
No 180
>3dby_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.10A {Bacillus cereus} SCOP: a.29.13.1 a.29.13.1
Probab=33.30 E-value=2.7e+02 Score=30.39 Aligned_cols=69 Identities=12% Similarity=0.161 Sum_probs=37.2
Q ss_pred CchhhhhhhhhhccchHHHHHcc--hhHHHHHHHHHHHhhhhcCCCCCcceeeeeccchhchhccccc-CCcchHHHHHH
Q 001026 963 PRVESKLRVFSFKIQFQTQVRNS--IKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRAR-NNKMTLMHYLC 1039 (1184)
Q Consensus 963 Prl~~RL~~l~fk~~F~~~L~~S--~~L~~lL~~IL~iGN~LN~gt~rG~A~GFkL~SL~KL~dtKs~-d~k~TLLhflv 1039 (1184)
...+..-++-.|+..|+..+.+. ..+..+-+.++...+ +-..||...|.++...|-. ..--+|+++++
T Consensus 36 ~e~~li~~A~~F~~~Fd~Ll~~a~~~~v~~ln~~a~~~~~---------~l~~FK~~ll~~iL~ckI~~~~~PllidH~l 106 (269)
T 3dby_A 36 KEKEDIKKATYFVETFTNLLNKVRNVNLMAFSKEAEQAAK---------EIRAFKLNIIQKQLEGKITIHFTPTFINHMV 106 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTSTTSCHHHHHHHHHHHHH---------HHHHHHHHHHHHHHTTCCCBSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHcCchhhccChHHHHHHH
Confidence 33444455566777776664444 234444444443222 2235677777777666654 34456666666
Q ss_pred H
Q 001026 1040 K 1040 (1184)
Q Consensus 1040 k 1040 (1184)
+
T Consensus 107 r 107 (269)
T 3dby_A 107 N 107 (269)
T ss_dssp H
T ss_pred H
Confidence 6
No 181
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=33.27 E-value=5.8e+02 Score=28.90 Aligned_cols=29 Identities=21% Similarity=0.214 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
-|..|++..-..++.+++.|++..+.|+.
T Consensus 137 pL~~f~k~di~~~ke~kK~Fek~~~~Yd~ 165 (407)
T 4h8s_A 137 PIIQFREKDLTEVSTLKDLFGLASNEHDL 165 (407)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444443
No 182
>1naf_A ADP-ribosylation factor binding protein GGA1, golgi-localized, gamma EAR-; clathrin-adaptor, GAT domain, helical paper-CLIP, three-helix bundle; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=32.49 E-value=1.8e+02 Score=29.21 Aligned_cols=48 Identities=10% Similarity=0.121 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1093 RSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEEN 1143 (1184)
Q Consensus 1093 ~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~ 1143 (1184)
+.++++|+.++..-..+..+..+.... ++.+..+.++=..+.++...+
T Consensus 91 Ell~eL~~~Ck~~qp~i~~Li~e~~dd---ee~L~elL~~ND~Ln~vl~kY 138 (158)
T 1naf_A 91 DLMKELYQRCERMRPTLFRLASDTEDN---DEALAEILQANDNLTQVINLY 138 (158)
T ss_dssp THHHHHHHHHHTHHHHHHHHHHHCCSC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCC---HHHHHHHHHhhHHHHHHHHHH
Confidence 445555555555555555555432211 455555555555555555544
No 183
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=32.35 E-value=1.8e+02 Score=42.42 Aligned_cols=26 Identities=23% Similarity=0.206 Sum_probs=16.4
Q ss_pred HHHHHHhhhCCCCcEEEEEeccCCcCc
Q 001026 46 GIVGQLREYFPEASFMVFNFREGEHQS 72 (1184)
Q Consensus 46 dV~~fL~~~H~~~~y~V~Nl~ee~~~~ 72 (1184)
+.++.|-...+- ..+|||+++.-.+.
T Consensus 619 et~k~La~~lgr-~~~vfnC~~~~d~~ 644 (3245)
T 3vkg_A 619 ETVKALGSQLGR-FVLVFCCDEGFDLQ 644 (3245)
T ss_dssp HHHHHHHHHTTC-CEEEEECSSCCCHH
T ss_pred HHHHHHHHHhCC-eEEEEeCCCCCCHH
Confidence 345566666666 48889987664443
No 184
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=32.15 E-value=53 Score=43.45 Aligned_cols=27 Identities=11% Similarity=0.203 Sum_probs=16.2
Q ss_pred HHHHHHHHHhhcCcCcCCCCchhhhhh
Q 001026 331 IEAFAKVQEIFSNVDWLDPKLDVAVNM 357 (1184)
Q Consensus 331 ~e~f~~~~~~~~~~~~~~~~~~~~~~~ 357 (1184)
.+.|.++.+.|.-+...+...+....+
T Consensus 328 ~~~f~~~~~a~~~lg~~~~e~~~i~~i 354 (1184)
T 1i84_S 328 DEMFQETLEAMTIMGFTEEEQTSILRV 354 (1184)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhceeCHHHHHHHHHH
Confidence 477888887777666555444443333
No 185
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=32.08 E-value=4.6e+02 Score=28.07 Aligned_cols=31 Identities=13% Similarity=0.112 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhhhCC
Q 001026 1085 LSYAEGEVRSLALLYSSVGRNADAL-AQYFGE 1115 (1184)
Q Consensus 1085 l~~a~~~l~~L~~~~~~~~~~~~~l-~~yFGE 1115 (1184)
+..+..++...++.|...-..+... ..||.+
T Consensus 181 ~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~ 212 (305)
T 2efl_A 181 AQIRHQMAEDSKADYSSILQKFNHEQHEYYHT 212 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555554 455555
No 186
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=31.89 E-value=1.6e+02 Score=25.78 Aligned_cols=25 Identities=8% Similarity=-0.013 Sum_probs=13.1
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHH
Q 001026 1072 EVSGNFCKLLKEFLSYAEGEVRSLA 1096 (1184)
Q Consensus 1072 ~~~d~f~~~m~~Fl~~a~~~l~~L~ 1096 (1184)
...+.|...+..+...+..-.+.|.
T Consensus 49 ~a~~af~~~~~~~~~~~~~~~~~L~ 73 (93)
T 4ioe_A 49 ATQAKFRGEFIQSKQAMQQYIPILE 73 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446677766665544444433333
No 187
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=31.09 E-value=3.8e+02 Score=26.10 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=20.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYS 1100 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~ 1100 (1184)
+-+.+.+..|++++...+..|+..+.
T Consensus 41 ~~~~elv~~Fl~d~~~~l~~L~~Al~ 66 (149)
T 1yvi_A 41 GFVSEVVTLFCDDADRIINEIATLLE 66 (149)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999998888876653
No 188
>3qfl_A MLA10; coiled-coil, (CC) domain, NLRS, nucleotide-binding domain, L rich repeat containing receptors, protein binding; 2.00A {Hordeum vulgare}
Probab=30.99 E-value=3.3e+02 Score=25.41 Aligned_cols=28 Identities=18% Similarity=0.189 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001026 1042 QLKFLAEEMQAISKGLEKVVQELTASEN 1069 (1184)
Q Consensus 1042 ~L~~L~~El~~l~k~L~kv~~el~~s~~ 1069 (1184)
.+..+.+|++.|+..|+.+...|...+.
T Consensus 20 l~~gv~~~i~~Lk~eL~~m~a~L~da~~ 47 (115)
T 3qfl_A 20 LHKGVKKNIEDLGKELESMNAALIKIGE 47 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778888888888888877776554
No 189
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=30.56 E-value=48 Score=30.29 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=40.0
Q ss_pred cHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHhc-CCCcE
Q 001026 43 YLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLSL-GHQNV 121 (1184)
Q Consensus 43 ~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~~-d~~NV 121 (1184)
..+++.+.|++ + ++.|..+++...+ .. .+. .|.-..+++.|.. |+.. +.+.-
T Consensus 8 ~~~~l~~~~~~---~-~~~liDvR~~~e~----------~~--ghI----pgA~~ip~~~l~~-------~~~~l~~~~~ 60 (108)
T 1gmx_A 8 NVADAHQKLQE---K-EAVLVDIRDPQSF----------AM--GHA----VQAFHLTNDTLGA-------FMRDNDFDTP 60 (108)
T ss_dssp CHHHHHHHHHT---T-CCEEEECSCHHHH----------HH--CEE----TTCEECCHHHHHH-------HHHHSCTTSC
T ss_pred CHHHHHHHHhC---C-CCEEEEcCCHHHH----------Hh--CCC----ccCEeCCHHHHHH-------HHHhcCCCCC
Confidence 45666666654 2 3889998765322 11 111 1111124444433 3332 45567
Q ss_pred EEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 122 LLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 122 vvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
+||+|..|. | +..++.+|...|+
T Consensus 61 ivvyc~~g~-r--s~~a~~~L~~~G~ 83 (108)
T 1gmx_A 61 VMVMCYHGN-S--SKGAAQYLLQQGY 83 (108)
T ss_dssp EEEECSSSS-H--HHHHHHHHHHHTC
T ss_pred EEEEcCCCc-h--HHHHHHHHHHcCC
Confidence 999997653 4 5666666666654
No 190
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=30.51 E-value=1.3e+02 Score=30.08 Aligned_cols=8 Identities=13% Similarity=0.165 Sum_probs=3.3
Q ss_pred chhccccc
Q 001026 1021 KLTDTRAR 1028 (1184)
Q Consensus 1021 KL~dtKs~ 1028 (1184)
.|..+|+.
T Consensus 60 ~l~klkDk 67 (152)
T 4fla_A 60 LLEKITDK 67 (152)
T ss_dssp GGGGCCSH
T ss_pred HHHHcccH
Confidence 34444443
No 191
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=30.50 E-value=3.7e+02 Score=39.39 Aligned_cols=13 Identities=8% Similarity=0.210 Sum_probs=5.9
Q ss_pred HHHhhcCcCcCCC
Q 001026 337 VQEIFSNVDWLDP 349 (1184)
Q Consensus 337 ~~~~~~~~~~~~~ 349 (1184)
+.++|.+++..+.
T Consensus 856 i~DlFPgv~~~~~ 868 (3245)
T 3vkg_A 856 LLDVFPGSQLQPI 868 (3245)
T ss_dssp HHHHSTTCCCCCC
T ss_pred HHHhCCCCCCCCC
Confidence 3444555444433
No 192
>2ets_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.25A {Staphylococcus aureus subsp} SCOP: a.24.26.1
Probab=30.17 E-value=1.7e+02 Score=28.49 Aligned_cols=23 Identities=13% Similarity=0.322 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLAL 1097 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~ 1097 (1184)
-.|.+.++.|.+.+...++.++.
T Consensus 41 ~DFy~eVKPf~d~vd~~l~eW~~ 63 (128)
T 2ets_A 41 HDFYQTVKPYTEHIDSILNEIKL 63 (128)
T ss_dssp CCTTTTHHHHHHHHHHHHHHHHH
T ss_pred CCccccccchHHHHHHHHHHHHH
Confidence 46888899999888888887765
No 193
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=29.81 E-value=7.3e+02 Score=28.98 Aligned_cols=10 Identities=0% Similarity=-0.147 Sum_probs=5.3
Q ss_pred cchHHHHHHH
Q 001026 1031 KMTLMHYLCK 1040 (1184)
Q Consensus 1031 k~TLLhflvk 1040 (1184)
-..|++++-.
T Consensus 24 ~~~L~~r~~~ 33 (486)
T 3haj_A 24 YKRTVKRIDD 33 (486)
T ss_dssp THHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555555
No 194
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=29.40 E-value=5.9e+02 Score=29.43 Aligned_cols=31 Identities=10% Similarity=0.058 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC
Q 001026 1086 SYAEGEVRSLALLYSSVGRNADALAQYFGED 1116 (1184)
Q Consensus 1086 ~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd 1116 (1184)
++.+..|++|+++.+++.+..+.|..-+.++
T Consensus 41 ~~LE~~l~elsn~ts~v~~Lvk~iq~~~~~~ 71 (409)
T 1m1j_C 41 LEIEGLLQQATNSTGSIEYLIQHIKTIYPSE 71 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3334444444444444444444444445544
No 195
>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A
Probab=29.08 E-value=3.8e+02 Score=27.98 Aligned_cols=41 Identities=0% Similarity=-0.286 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 001026 1102 VGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEE 1142 (1184)
Q Consensus 1102 ~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee 1142 (1184)
+-...+.+..|+..-..-.+.++|...|.+|-..+.+....
T Consensus 94 il~~~~~v~~~L~~le~~~s~~el~~~f~~f~~~m~~l~~l 134 (205)
T 1dow_A 94 LLVQLKVVEDGILKLRNAGNEQDLGIQYKALKPEVDKLNIM 134 (205)
T ss_dssp HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhHHHHHHHHH
Confidence 33455666666654333335566666666665554444333
No 196
>2qup_A BH1478 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Bacillus halodurans}
Probab=28.83 E-value=4.3e+02 Score=25.99 Aligned_cols=66 Identities=18% Similarity=0.148 Sum_probs=41.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHH
Q 001026 1029 NNKMTLMHYLCKIQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSL 1095 (1184)
Q Consensus 1029 d~k~TLLhflvki~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L 1095 (1184)
..+.+|...+.+..-+...++|+++...+...-+.|....+- ..-..|++.++.|++.+....-.+
T Consensus 22 ~~~~~F~~~l~~~~~~~~~e~L~~ll~~I~~~G~rL~~~~t~-~~l~~YK~lVk~Fl~~~v~~~~~l 87 (145)
T 2qup_A 22 AAGVSFSEVMGKQRDEKAYERLQALMSKIDDQGKLLSETRTI-EELRKYKELVKEFVGDAVELGLRL 87 (145)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHhee
Confidence 455677777666443444467777777777777777665432 122568888888888886654444
No 197
>3ajw_A Flagellar FLIJ protein; flagellum, type III secretion, coiled-coil, protein transpor; 2.10A {Salmonella typhimurium}
Probab=28.66 E-value=4e+02 Score=25.53 Aligned_cols=14 Identities=14% Similarity=0.169 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHH
Q 001026 1127 STLLNFVKMFVLAH 1140 (1184)
Q Consensus 1127 ~~l~~F~~~fk~a~ 1140 (1184)
..+..|+..+..++
T Consensus 70 ~~~~~fi~~L~~~I 83 (150)
T 3ajw_A 70 INYQQFIQTLEKAI 83 (150)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44555555554443
No 198
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=28.50 E-value=2.1e+02 Score=25.11 Aligned_cols=59 Identities=20% Similarity=0.309 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1043 LKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGR 1104 (1184)
Q Consensus 1043 L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~ 1104 (1184)
++.+..+-..|+..|..+++.|+.+... .+.+...++.|++....+|..|..+-..+.+
T Consensus 9 Lq~~E~~N~~Le~~v~~le~~Le~s~~~---q~~~~~Elk~~~e~Ld~KI~eL~elrq~Lak 67 (72)
T 3cve_A 9 LQEVEIRNKDLEGQLSEMEQRLEKSQSE---QDAFRSNLKTLLEILDGKIFELTELRDNLAK 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3445555556677777777777766532 2567778888888888888877766655544
No 199
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=28.21 E-value=2.9e+02 Score=27.17 Aligned_cols=16 Identities=6% Similarity=0.264 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHHHHH
Q 001026 1046 LAEEMQAISKGLEKVV 1061 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~ 1061 (1184)
+..||..+.+.|.+++
T Consensus 59 v~kdi~~a~~eL~~m~ 74 (141)
T 3okq_A 59 VSKDLENAQADVLKLQ 74 (141)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333333333333333
No 200
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=28.03 E-value=1.2e+02 Score=35.92 Aligned_cols=11 Identities=18% Similarity=0.401 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 001026 1054 SKGLEKVVQEL 1064 (1184)
Q Consensus 1054 ~k~L~kv~~el 1064 (1184)
.+.|++|++++
T Consensus 63 tkrINELKnqL 73 (562)
T 3ghg_A 63 TNRINKLKNSL 73 (562)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333443333
No 201
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=27.80 E-value=3.7e+02 Score=25.47 Aligned_cols=58 Identities=19% Similarity=0.201 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1042 QLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADAL 1109 (1184)
Q Consensus 1042 ~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l 1109 (1184)
+++.|..++..+.+.|.+...+....+ +.+..--++...+|..|...+.+.+....+|
T Consensus 7 ~~~~lq~~~~ql~~qL~k~~~~r~~Le----------~~w~~k~E~~k~qV~~L~~~~q~sE~~L~~L 64 (112)
T 1x79_B 7 QVKKLQLMLRQANDQLEKTMKDKQELE----------DFIKQSSEDSSHQISALVLRAQASEILLEEL 64 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666666655543332221 1233334455555666655555555444433
No 202
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=27.68 E-value=4.6e+02 Score=27.59 Aligned_cols=15 Identities=33% Similarity=0.372 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHHH
Q 001026 1125 VVSTLLNFVKMFVLA 1139 (1184)
Q Consensus 1125 ff~~l~~F~~~fk~a 1139 (1184)
|+..|...+..|.+|
T Consensus 111 ~~~~LLpVlDnlerA 125 (213)
T 4ani_A 111 LASDLLPVLDNFERA 125 (213)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHH
Confidence 333333333333333
No 203
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=27.32 E-value=61 Score=28.16 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=18.3
Q ss_pred HhcCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 114 LSLGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 114 L~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
|..+.+.-+||+|..| .| +..+|.+|...|
T Consensus 36 l~~~~~~~ivv~C~~g-~r--s~~aa~~L~~~G 65 (85)
T 2jtq_A 36 AVPDKNDTVKVYCNAG-RQ--SGQAKEILSEMG 65 (85)
T ss_dssp HCCCTTSEEEEEESSS-HH--HHHHHHHHHHTT
T ss_pred hCCCCCCcEEEEcCCC-ch--HHHHHHHHHHcC
Confidence 3336667899999754 34 455555555443
No 204
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=27.06 E-value=4.7e+02 Score=30.15 Aligned_cols=7 Identities=0% Similarity=0.154 Sum_probs=2.6
Q ss_pred cchhHHH
Q 001026 984 NSIKLKR 990 (1184)
Q Consensus 984 ~S~~L~~ 990 (1184)
....++.
T Consensus 327 ~~p~~~~ 333 (471)
T 3mq9_A 327 KDPRIAA 333 (471)
T ss_dssp TSHHHHH
T ss_pred cChhHHH
Confidence 3333333
No 205
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=27.00 E-value=4.5e+02 Score=25.92 Aligned_cols=24 Identities=25% Similarity=0.383 Sum_probs=14.5
Q ss_pred eccchhchhcccccCCcchHHHHHHH
Q 001026 1015 RLDSLLKLTDTRARNNKMTLMHYLCK 1040 (1184)
Q Consensus 1015 kL~SL~KL~dtKs~d~k~TLLhflvk 1040 (1184)
.|+.|.|+.++. |.+..+.+|+-.
T Consensus 18 sle~L~k~~~~~--d~~ipl~~y~rs 41 (144)
T 2a9u_A 18 SLKDLNKKTEVK--PEKISTKSYVHS 41 (144)
T ss_dssp SHHHHHGGGCCC--GGGSCHHHHHHH
T ss_pred CHHHHHHhcccc--cccCcHHHHHHH
Confidence 566777776654 445666666544
No 206
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=26.99 E-value=5.1e+02 Score=27.18 Aligned_cols=13 Identities=23% Similarity=0.202 Sum_probs=6.9
Q ss_pred hHHHHHHHHHHHh
Q 001026 987 KLKRIMQTILSLG 999 (1184)
Q Consensus 987 ~L~~lL~~IL~iG 999 (1184)
.+..+|+.+|..+
T Consensus 65 ey~~~l~~aL~~~ 77 (213)
T 1ik9_A 65 KYVGELRKALLSG 77 (213)
T ss_dssp HHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhCC
Confidence 3555666666544
No 207
>1yfs_A Alanyl-tRNA synthetase; alpha-beta fold, helix-loop-helix motif, amino acid binding, ligase; 2.08A {Aquifex aeolicus} SCOP: a.203.1.1 d.104.1.1 PDB: 1yfr_A* 1riq_A 1yft_A 1ygb_A 3htz_A
Probab=26.68 E-value=1e+02 Score=36.27 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=12.5
Q ss_pred hHHHHHHHHHHHhhhhcC
Q 001026 987 KLKRIMQTILSLGNALNH 1004 (1184)
Q Consensus 987 ~L~~lL~~IL~iGN~LN~ 1004 (1184)
-||+||+-.+..|..|+.
T Consensus 295 VLRRilRRavr~g~~Lg~ 312 (465)
T 1yfs_A 295 VIRRILRRAMRFGYKLGI 312 (465)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 377777777777776643
No 208
>3nr7_A DNA-binding protein H-NS; dimer, oligomerisation, DNA condensation; 3.70A {Salmonella enterica subsp} PDB: 1lr1_A 1ni8_A
Probab=26.66 E-value=1.4e+02 Score=27.09 Aligned_cols=46 Identities=9% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhccch
Q 001026 1126 VSTLLNFVKMFVLAHEENCRQLEFERKK-AEKAVENEKLKTQKGQSE 1171 (1184)
Q Consensus 1126 f~~l~~F~~~fk~a~ee~~k~~e~ekkk-~ekeaekek~k~~~~e~~ 1171 (1184)
|..|.+++..|..++++-++.++++++. ++++++.++.++.-.+++
T Consensus 26 le~Lee~leKl~~VveERree~~~~~~~~~er~~Kl~~~~e~l~~~G 72 (86)
T 3nr7_A 26 LETLEEMLEKLEVVVNERREEESAAAAEVEERTRKLQQYREMLIADG 72 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
No 209
>3lnr_A Aerotaxis transducer AER2; HAMP domain, poly-HAMP domains, signaling protein; 2.64A {Pseudomonas aeruginosa}
Probab=26.48 E-value=2.2e+02 Score=28.71 Aligned_cols=76 Identities=16% Similarity=0.048 Sum_probs=32.8
Q ss_pred chHHHHHHH--HHHHHHHHHHHHHHH---HHHHHHHHHhhhccCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1032 MTLMHYLCK--IQLKFLAEEMQAISK---GLEKVVQELTASENDGE-VSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRN 1105 (1184)
Q Consensus 1032 ~TLLhflvk--i~L~~L~~El~~l~k---~L~kv~~el~~s~~d~~-~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~ 1105 (1184)
..|++-+.+ -.|..+..+++.++. ++..+.++...-.-+.. ..+.|...+++..+....-+..+..-+.++.+.
T Consensus 45 g~L~~al~~M~~~L~~~v~~i~~v~~l~~e~~~~a~~~~~Gdl~~R~d~~~~~G~~~~l~~~vN~~~~~~~~~~~~~~~v 124 (175)
T 3lnr_A 45 ERLYDSLRALQRQLREQRAELQQVESLEAGLAEMSRQHEAGWIDQTIPAERLEGRAARIAKGVNELVAAHIAVKMKVVSV 124 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCCCCGGGCCTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccccCccccChHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 446655555 345555555544333 33333333332111111 123455555555555555444444444444433
Q ss_pred HH
Q 001026 1106 AD 1107 (1184)
Q Consensus 1106 ~~ 1107 (1184)
..
T Consensus 125 ~~ 126 (175)
T 3lnr_A 125 VT 126 (175)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 210
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=26.45 E-value=2.7e+02 Score=34.25 Aligned_cols=13 Identities=0% Similarity=0.023 Sum_probs=5.6
Q ss_pred HHHHHHHHHhhhC
Q 001026 1102 VGRNADALAQYFG 1114 (1184)
Q Consensus 1102 ~~~~~~~l~~yFG 1114 (1184)
+++...++..|+.
T Consensus 583 ~~~~l~~~~~wl~ 595 (675)
T 3d2f_A 583 LQGMLNKAEEWLY 595 (675)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 3334444444553
No 211
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=26.11 E-value=5.6e+02 Score=30.25 Aligned_cols=21 Identities=10% Similarity=0.055 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001026 1088 AEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1088 a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
.+.+-+.+++...+.+..|+.
T Consensus 46 i~aeNeaikkrNa~aka~Ye~ 66 (497)
T 3iox_A 46 LTAENTAIKKRNADAKADYEA 66 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555554
No 212
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=26.00 E-value=2.6e+02 Score=24.90 Aligned_cols=59 Identities=10% Similarity=0.088 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1043 LKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGR 1104 (1184)
Q Consensus 1043 L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~ 1104 (1184)
++.+...-..|+..|..+++.|+.+... .+.+...++.|++....+|..|..+-..+.+
T Consensus 15 lq~~E~rN~~Le~~v~~le~~Le~s~~~---q~~~~~Elk~l~e~Ld~KI~eL~elRqgLak 73 (79)
T 3cvf_A 15 VQDLETRNAELEHQLRAMERSLEEARAE---RERARAEVGRAAQLLDVSLFELSELREGLAR 73 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4455555566777777777777766532 2566778888888888888877766665544
No 213
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=25.88 E-value=2.1e+02 Score=27.40 Aligned_cols=85 Identities=12% Similarity=0.131 Sum_probs=47.4
Q ss_pred cccCCcCCCCCceeEEEEEecCCCcccCCCCcEEEeCccCccce-eeecccCccEEEEeccc-cccCCeEEEEEecCCcC
Q 001026 181 RVIPNFDGEGGCCPIFRIYGQDPLMVADRTPKVLFSTPKRSKLV-RHYKQADCELVKIDIHC-HIQGDVVLECISLDSDQ 258 (1184)
Q Consensus 181 r~VP~f~~~~gcrP~l~Iy~~~~~~~~~~~~~~lfss~~~~~~~-~~~~~~d~~~i~i~~~~-~v~GDV~i~~~h~~~~~ 258 (1184)
+.++..+..+.+.||++|+-... ......+.|....+.. -.|. +.+.|++.. .+...+.|+||+.+..
T Consensus 41 ~~L~~~d~~g~~dpyv~v~~~~~-----~~~~~~~kT~v~~~t~nP~wn----e~f~f~v~~~~~~~~L~i~V~d~d~~- 110 (149)
T 1a25_A 41 KNLVPMDPNGLSDPYVKLKLIPD-----PKSESKQKTKTIKCSLNPEWN----ETFRFQLKESDKDRRLSVEIWDWDLT- 110 (149)
T ss_dssp ESCCCCSTTSCCCEEEEEEEESC-----TTCSSCEECCCCSSCSSCEEE----EEEEEECCSGGGGCEEEEEEEECCSS-
T ss_pred eCCCCCCCCCCcCeEEEEEEECC-----CCCcceEecceeCCCCCCcCC----cEEEEEeccccCCCEEEEEEEECCCC-
Confidence 55565565567899999986421 1112234443222221 2342 236666632 2455688999988643
Q ss_pred ccceeEEEEEeeccccc
Q 001026 259 EREEMMFRVMFNTAFIR 275 (1184)
Q Consensus 259 ~~~~~~Fr~~FnT~FI~ 275 (1184)
.+...|.++.|.-.-+.
T Consensus 111 ~~~~~iG~~~i~l~~l~ 127 (149)
T 1a25_A 111 SRNDFMGSLSFGISELQ 127 (149)
T ss_dssp SCCEEEEEEEEEHHHHT
T ss_pred CCCCEEEEEEEEHHHhC
Confidence 33467888877655443
No 214
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=25.86 E-value=1.6e+02 Score=28.69 Aligned_cols=9 Identities=22% Similarity=0.508 Sum_probs=3.7
Q ss_pred HHHHHHHHh
Q 001026 1057 LEKVVQELT 1065 (1184)
Q Consensus 1057 L~kv~~el~ 1065 (1184)
|..++..+.
T Consensus 62 L~eIk~~l~ 70 (142)
T 3gp4_A 62 IEALIDYLA 70 (142)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 344444333
No 215
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=25.84 E-value=6e+02 Score=27.86 Aligned_cols=38 Identities=16% Similarity=0.124 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 001026 1078 CKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGE 1115 (1184)
Q Consensus 1078 ~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGE 1115 (1184)
.++++.-++.+..++...++.|...-..+.....+|.+
T Consensus 185 ~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~~~~ 222 (337)
T 2x3v_A 185 QKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYME 222 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 45566666777777777777777666666666666654
No 216
>4b4t_U RPN8, 26S proteasome regulatory subunit RPN8; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.83 E-value=62 Score=36.56 Aligned_cols=26 Identities=19% Similarity=0.230 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc
Q 001026 1043 LKFLAEEMQAISKGLEKVVQELTASE 1068 (1184)
Q Consensus 1043 L~~L~~El~~l~k~L~kv~~el~~s~ 1068 (1184)
+......++.|...|+.+.+-++...
T Consensus 190 l~~~~~al~~L~~~l~~i~~Yl~~V~ 215 (338)
T 4b4t_U 190 LTNQLKSLKGLQSKLKDVVEYLDKVI 215 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34444455556666666666555544
No 217
>3d19_A Conserved metalloprotein; structural genomics, unknown function, PSI-2, protein struct initiative, nysgxrc; 2.30A {Bacillus cereus} SCOP: a.29.13.1 a.29.13.1
Probab=25.75 E-value=3.2e+02 Score=30.01 Aligned_cols=30 Identities=20% Similarity=0.188 Sum_probs=22.2
Q ss_pred eeeeeccchhchhcccc--cCCcchHHHHHHH
Q 001026 1011 AVGFRLDSLLKLTDTRA--RNNKMTLMHYLCK 1040 (1184)
Q Consensus 1011 A~GFkL~SL~KL~dtKs--~d~k~TLLhflvk 1040 (1184)
-..||..-|.++...|- +..--+|+++++.
T Consensus 89 l~~FK~~il~~iL~cki~~s~~~PllidH~lr 120 (283)
T 3d19_A 89 IWGFKRKILGLILTCKLPGQNNFPLLVDHTSR 120 (283)
T ss_dssp HHHHHHHHHHHHHTTCSTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCccccccCcchHHHHHHH
Confidence 34678888888888775 3566788888877
No 218
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=25.74 E-value=7.4e+02 Score=27.74 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
-|..|++.--..++.+++.|+++.+.|+.
T Consensus 114 PL~~f~~~di~~~ke~kk~fek~~~~yd~ 142 (385)
T 2q13_A 114 PITQFKERDLKEILTLKEVFQIASNDHDA 142 (385)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444443
No 219
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=25.68 E-value=2.2e+02 Score=26.56 Aligned_cols=62 Identities=24% Similarity=0.224 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----hhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1041 IQLKFLAEEMQAISKGLEKVVQELT----ASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1041 i~L~~L~~El~~l~k~L~kv~~el~----~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
-++++|.+|+...+..|....+.|. ..+.|- |. .=+.-++.-+..|..|+..+.++++...+
T Consensus 35 ~~ieeLQ~Ei~~~E~QL~iArQKLkdAe~~~E~DP---De---vNK~tl~~R~~~Vsalq~KiaeLKrqLAd 100 (107)
T 2k48_A 35 STLQELQENITAHEQQLVTARQKLKDAEKAVEVDP---DD---VNKSTLQNRRAAVSTLETKLGELKRQLAD 100 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---cH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777666654444443 333332 11 11222344455556666666655554443
No 220
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=25.53 E-value=6.4e+02 Score=26.90 Aligned_cols=37 Identities=8% Similarity=-0.023 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhCCC
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADAL-AQYFGED 1116 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l-~~yFGEd 1116 (1184)
+++.-+..+..++...++.|...-..+... -.||.++
T Consensus 169 K~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~ 206 (301)
T 2efk_A 169 KAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAHFYFSQ 206 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555555566666555555555 5566663
No 221
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=25.50 E-value=2.5e+02 Score=29.90 Aligned_cols=39 Identities=10% Similarity=0.089 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 001026 1076 NFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFG 1114 (1184)
Q Consensus 1076 ~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFG 1114 (1184)
.|...|.+|++.+-..-...-+.|++++-.|..-+.+..
T Consensus 88 ~f~s~l~T~~~kaI~DT~lTIk~ye~aR~EY~ay~~~~e 126 (224)
T 1i4d_A 88 FFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLE 126 (224)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhccHHHHHHHHHHHHhHhHHHHHhhHH
Confidence 355555666555554444445566666666666665443
No 222
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=25.46 E-value=2.1e+02 Score=28.58 Aligned_cols=7 Identities=14% Similarity=0.074 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 001026 1138 LAHEENC 1144 (1184)
Q Consensus 1138 ~a~ee~~ 1144 (1184)
+..+||.
T Consensus 121 kLq~EN~ 127 (152)
T 3a7p_A 121 DLKKEHS 127 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333443
No 223
>1us7_B HSP90 CO-chaperone CDC37; chaperone CO-chaperone regulation, ATP-binding, H shock,; 2.3A {Homo sapiens} SCOP: a.205.1.1 PDB: 2k5b_B 2w0g_A
Probab=25.45 E-value=6.4e+02 Score=27.37 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=24.6
Q ss_pred HHHHHHHhhhCCCCCCCCHHHHHHHHHH--------HHHHHHHHHHHHHHHHH
Q 001026 1104 RNADALAQYFGEDPARCPFEQVVSTLLN--------FVKMFVLAHEENCRQLE 1148 (1184)
Q Consensus 1104 ~~~~~l~~yFGEd~~~~~~e~ff~~l~~--------F~~~fk~a~ee~~k~~e 1148 (1184)
.-+.+|+.-+|-++.. -+..||+.|.. |..++....+..++|.+
T Consensus 104 QYIlELak~L~~dpr~-~v~~FF~ki~~~~~~~~~~F~ddV~~~~~RIk~Ra~ 155 (265)
T 1us7_B 104 QFILELAKSLKVDPRA-CFRQFFTKIKTADRQYMEGFNDELEAFKERVRGRAK 155 (265)
T ss_dssp HHHHHHHHHHSSCGGG-THHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhh-HHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566667765433 45788887743 55555555554444443
No 224
>1lw3_A Myotubularin-related protein 2; protein-phosphate complex, hydrolase; 2.30A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1m7r_A
Probab=25.31 E-value=90 Score=38.37 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=27.7
Q ss_pred cEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhhhchhhhhcc
Q 001026 120 NVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYKQAPRELLQL 169 (1184)
Q Consensus 120 NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~pSq~ryl~y 169 (1184)
.-|+|||.+|--| |+.+.+--.|...-| -+|++.|..--+|++|.+
T Consensus 414 ~sVLVhcsDGwDr-T~qlsSLaQLlLDPy---YRTi~GF~vLIEKEWlsf 459 (657)
T 1lw3_A 414 TSVVVHSSDGWDR-TAQLTSLAMLMLDGY---YRTIRGFEVLVEKEWLSF 459 (657)
T ss_dssp CCEEEECSSSSSH-HHHHHHHHHHHHCGG---GGSHHHHHHHHHHHTTTT
T ss_pred ceEEEECCCCccc-hHHHHHHHHHHhCcc---ccHHHHHHHHHHHHHHhc
Confidence 4788999998877 666544333433322 346666644445666654
No 225
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=25.27 E-value=4e+02 Score=24.49 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=20.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
+.....+.+-++.++.+++.|++.+..+.+.+.+
T Consensus 69 ~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~ 102 (117)
T 2zqm_A 69 DKAVAELKEKIETLEVRLNALERQEKKLNEKLKE 102 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666666666666655554443
No 226
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=24.99 E-value=3.6e+02 Score=23.81 Aligned_cols=58 Identities=5% Similarity=0.070 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1081 LKEFLSYAEGEVRSLALLYSSVGRNADALAQ-YFGEDPARCPFEQVVSTLLNFVKMFVLAHEEN 1143 (1184)
Q Consensus 1081 m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~-yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~ 1143 (1184)
|...-.........|+..+.++......|.. |-|+. .+.|...+.++...+.+..+..
T Consensus 13 l~~~A~~~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a-----~~aF~~~~~~~~~~~~~~~~~L 71 (98)
T 3gwk_C 13 LRSSAQKYTAGSQQVTEVLNLLTQEQAVIDENWDGST-----FDSFEAQFNELSPKITEFAQLL 71 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSST-----THHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHH-----HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444445555555555555555544 33442 2566666666655555544433
No 227
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=24.67 E-value=54 Score=30.75 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=17.2
Q ss_pred cEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 120 NVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 120 NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
.-|||+|..|+.| +..++.+|...|.
T Consensus 90 ~~ivvyC~~~G~r--s~~a~~~L~~~G~ 115 (134)
T 3g5j_A 90 DNIVIYCARGGMR--SGSIVNLLSSLGV 115 (134)
T ss_dssp SEEEEECSSSSHH--HHHHHHHHHHTTC
T ss_pred CeEEEEECCCChH--HHHHHHHHHHcCC
Confidence 5789999645555 5566666666654
No 228
>1o5h_A Formiminotetrahydrofolate cyclodeaminase; TM1560, structural genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 2.80A {Thermotoga maritima} SCOP: a.191.1.1
Probab=24.64 E-value=1.2e+02 Score=32.17 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 001026 1046 LAEEMQAISKGLEKVVQELT 1065 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~ 1065 (1184)
+.++|+++...++.++.++.
T Consensus 67 ~e~~~~~i~~~~~~l~~~ll 86 (214)
T 1o5h_A 67 VEPEMERIVEAMEEARLKLF 86 (214)
T ss_dssp GHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444443
No 229
>2c5k_T Syntaxin TLG1, T-snare affecting A late golgi compartment protein 1; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae} PDB: 2c5j_A 2c5i_T
Probab=24.53 E-value=1.6e+02 Score=27.13 Aligned_cols=22 Identities=9% Similarity=0.113 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 001026 1079 KLLKEFLSYAEGEVRSLALLYS 1100 (1184)
Q Consensus 1079 ~~m~~Fl~~a~~~l~~L~~~~~ 1100 (1184)
..=+.|+.+++.+|+.|+..+.
T Consensus 71 ~~Rk~~v~~l~~~i~~lk~~~~ 92 (95)
T 2c5k_T 71 SGREAQVKNIKQQLDALKLRFD 92 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3456677777777777776654
No 230
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=24.53 E-value=4.2e+02 Score=24.65 Aligned_cols=10 Identities=10% Similarity=0.046 Sum_probs=3.7
Q ss_pred HHHHHHHHHH
Q 001026 1092 VRSLALLYSS 1101 (1184)
Q Consensus 1092 l~~L~~~~~~ 1101 (1184)
+..+++..++
T Consensus 13 l~~i~eR~~e 22 (109)
T 3hd7_B 13 LSEIETRHSE 22 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 231
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=24.35 E-value=4.8e+02 Score=29.32 Aligned_cols=24 Identities=25% Similarity=0.369 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 001026 1043 LKFLAEEMQAISKGLEKVVQELTA 1066 (1184)
Q Consensus 1043 L~~L~~El~~l~k~L~kv~~el~~ 1066 (1184)
+..+.+++..+++.|.++.+.+..
T Consensus 23 l~~~E~~~~~l~~~l~kl~k~~~~ 46 (385)
T 2q13_A 23 LGVFEEDATAISNYMNQLYQAMHR 46 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555554443
No 232
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=24.07 E-value=4.8e+02 Score=24.97 Aligned_cols=58 Identities=14% Similarity=0.172 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001026 1044 KFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQ 1111 (1184)
Q Consensus 1044 ~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~ 1111 (1184)
.++..+|+.|+..+..+.+.=. .. ...-+.-.+.|...|....+++..+...+.++..
T Consensus 5 ~~V~s~l~~LEaeyq~L~~kE~---------qr-ynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~ 62 (119)
T 2avr_X 5 ASLVGELQALDAEYQNLANQEE---------AR-FNEERAQADAARQALAQNEQVYNELSQRAQRLQA 62 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666666555543221 12 2344555667777777777777777777776654
No 233
>3fav_A ESAT-6-like protein ESXB; complex, operon structure, four-helical-bundle, coiled-coil, WXG-motif, secreted; 2.15A {Mycobacterium tuberculosis} SCOP: a.25.3.1 PDB: 1wa8_A
Probab=23.77 E-value=2e+02 Score=25.80 Aligned_cols=33 Identities=12% Similarity=0.139 Sum_probs=18.7
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1071 GEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVG 1103 (1184)
Q Consensus 1071 ~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~ 1103 (1184)
+...+.|...+..|-..+.+....|...-..+.
T Consensus 46 G~A~~af~~~~~~w~~~~~~l~~~L~~i~~~l~ 78 (101)
T 3fav_A 46 GAAGTAAQAAVVRFQEAANKQKQELDEISTNIR 78 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567877777777666554444444333333
No 234
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=23.73 E-value=2e+02 Score=27.25 Aligned_cols=62 Identities=21% Similarity=0.199 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----hhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1041 IQLKFLAEEMQAISKGLEKVVQELT----ASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1041 i~L~~L~~El~~l~k~L~kv~~el~----~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
+++++|.+|+...+..|....+.|. ..+.|- |.. =+.-+..-...|..|+..+.++++...+
T Consensus 22 ~~ieeLq~Ei~~~E~QL~~ArQKLkdA~~~~e~DP---Dev---NK~tl~~R~~~Vs~lq~KiaeLKrqLAd 87 (113)
T 4fi5_A 22 MTMEELQREINAHEGQLVIARQKVRDAEKQYEKDP---DEL---NKRTLTDREGVAVSIQAKIDELKRQLAD 87 (113)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---cHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5678888888877777654444444 333332 121 1122344444555555555555544433
No 235
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=23.71 E-value=3.5e+02 Score=31.65 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=49.4
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001026 1034 LMHYLCK--IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQ 1111 (1184)
Q Consensus 1034 LLhflvk--i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~ 1111 (1184)
+++.|++ -....+..++++|+.....+.+++.....+++. .+.+..-.....+++..|++.+.++++.+.+++.
T Consensus 29 ~~~~~~~l~~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (455)
T 2dq0_A 29 WVDEILKLDTEWRTKLKEINRLRHERNKIAVEIGKRRKKGEP----VDELLAKSREIVKRIGELENEVEELKKKIDYYLW 104 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC----THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555 234556667777777766676666654433322 2345555677788888888888888888888775
Q ss_pred hh
Q 001026 1112 YF 1113 (1184)
Q Consensus 1112 yF 1113 (1184)
-.
T Consensus 105 ~i 106 (455)
T 2dq0_A 105 RL 106 (455)
T ss_dssp TS
T ss_pred hC
Confidence 54
No 236
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=23.69 E-value=5.7e+02 Score=25.68 Aligned_cols=22 Identities=9% Similarity=-0.177 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 001026 1128 TLLNFVKMFVLAHEENCRQLEF 1149 (1184)
Q Consensus 1128 ~l~~F~~~fk~a~ee~~k~~e~ 1149 (1184)
........|+.+..++.+....
T Consensus 85 ~~~~L~~~f~~~~~~fq~~Q~~ 106 (196)
T 1fio_A 85 QAENSRQRFLKLIQDYRIVDSN 106 (196)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666777777776654443
No 237
>2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2
Probab=23.52 E-value=1.8e+02 Score=32.81 Aligned_cols=65 Identities=5% Similarity=-0.017 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1078 CKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEEN 1143 (1184)
Q Consensus 1078 ~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~ 1143 (1184)
...|...++.|...++.|...+..+...|..|..-.-.+..+...++ |..+...+..-+..|++.
T Consensus 259 ~~~l~~~I~~Ai~al~~l~~~W~~m~~~~~~l~~~I~~~~~~i~~~~-~~~i~~~L~~a~~~W~~l 323 (346)
T 2nrj_A 259 INEMHKALDDAINALTYMSTQWHDLDSQYSGVLGHIENAAQKADQNK-FKFLKPNLNAAKDSWKTL 323 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTT-TGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHH-HHHHHHHHHHHHhHHHHH
Confidence 35677778888889999999999999998888766654322323233 223333334444444443
No 238
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=23.33 E-value=4.2e+02 Score=25.90 Aligned_cols=23 Identities=13% Similarity=0.095 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1085 LSYAEGEVRSLALLYSSVGRNAD 1107 (1184)
Q Consensus 1085 l~~a~~~l~~L~~~~~~~~~~~~ 1107 (1184)
++.++.++..|++.+..+++...
T Consensus 105 ~e~~~~e~~~l~~~~~~l~~~~~ 127 (138)
T 3hnw_A 105 AESSAKEIKELKSEINKYQKNIV 127 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444333
No 239
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=23.26 E-value=3e+02 Score=32.63 Aligned_cols=75 Identities=15% Similarity=0.052 Sum_probs=46.0
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001026 1034 LMHYLCK--IQLKFLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQ 1111 (1184)
Q Consensus 1034 LLhflvk--i~L~~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~ 1111 (1184)
+++-|.+ -....+..++++|+.....+.+++.....+++.. +.+..-+...++++..|++.+.++++.+.+++.
T Consensus 31 ~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~----~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l~ 106 (485)
T 3qne_A 31 LVDEIIAEYKEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDA----KDLIAEKEKLSNEKKEIIEKEAEADKNLRSKIN 106 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4454444 2344555666666666666666655443333222 344555667788888888888888888877775
Q ss_pred h
Q 001026 1112 Y 1112 (1184)
Q Consensus 1112 y 1112 (1184)
-
T Consensus 107 ~ 107 (485)
T 3qne_A 107 Q 107 (485)
T ss_dssp T
T ss_pred h
Confidence 4
No 240
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=23.22 E-value=7.8e+02 Score=27.13 Aligned_cols=15 Identities=33% Similarity=0.264 Sum_probs=6.8
Q ss_pred hhHHHHHHHHHHHHH
Q 001026 1076 NFCKLLKEFLSYAEG 1090 (1184)
Q Consensus 1076 ~f~~~m~~Fl~~a~~ 1090 (1184)
.|......++.+.+.
T Consensus 85 tl~~aw~~l~~e~e~ 99 (350)
T 3aco_A 85 TVEKAWMAFMSEAER 99 (350)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH
Confidence 444444444444443
No 241
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=23.20 E-value=2.5e+02 Score=25.95 Aligned_cols=21 Identities=19% Similarity=0.216 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYS 1100 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~ 1100 (1184)
.|+.=++.++.+|..|+....
T Consensus 51 eL~~EI~~L~~eI~~LE~iqs 71 (96)
T 1t3j_A 51 HLEEEIARLSKEIDQLEKMQN 71 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333334444444444443333
No 242
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=23.18 E-value=49 Score=31.66 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=17.1
Q ss_pred CCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 117 GHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 117 d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
+.+.-+||+|..|. | +.++|.+|...|
T Consensus 72 ~~~~~ivv~C~sG~-R--S~~aa~~L~~~G 98 (134)
T 1vee_A 72 PENTTLYILDKFDG-N--SELVAELVALNG 98 (134)
T ss_dssp GGGCEEEEECSSST-T--HHHHHHHHHHHT
T ss_pred CCCCEEEEEeCCCC-c--HHHHHHHHHHcC
Confidence 45678999998664 6 345555555444
No 243
>1zsq_A Myotubularin-related protein 2; protein-phospholipid complex, hydrolase; HET: PIB; 1.82A {Homo sapiens} SCOP: b.55.1.8 c.45.1.3 PDB: 1zvr_A*
Probab=22.99 E-value=1.1e+02 Score=36.78 Aligned_cols=46 Identities=13% Similarity=0.166 Sum_probs=27.7
Q ss_pred cEEEEEecCCCCCchHHHHHHHHHHhhCCCcHHHHHHHHhhhchhhhhcc
Q 001026 120 NVLLMHCERGGWPVLAFMLAALLIYRKQFTGEQKTLDMIYKQAPRELLQL 169 (1184)
Q Consensus 120 NVvvvHCk~Gkgr~tg~mia~yLly~~~~~~~~~aL~~~~~pSq~ryl~y 169 (1184)
.-|+|||.+|--| |+.+.+--.|-..-| -+|++.|..--+|++|.+
T Consensus 342 ~sVLvhcsdGwDr-T~ql~SLaqllLDPy---yRTi~GF~~LIEKEWlsf 387 (528)
T 1zsq_A 342 TSVVVHSSDGWDR-TAQLTSLAMLMLDGY---YRTIRGFEVLVEKEWLSF 387 (528)
T ss_dssp CCEEEECSSSSSH-HHHHHHHHHHHHCGG---GGSHHHHHHHHHHHTTTT
T ss_pred ceEEEECCCCccc-hHHHHHHHHHHcCcc---ccHHHHHHHHHHhHHhhc
Confidence 4789999998887 666544433433322 346666544345666654
No 244
>4aj5_A SKA1, spindle and kinetochore-associated protein 1; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=22.77 E-value=39 Score=30.71 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=7.2
Q ss_pred HHHHHHHHHhhhCCC
Q 001026 1102 VGRNADALAQYFGED 1116 (1184)
Q Consensus 1102 ~~~~~~~l~~yFGEd 1116 (1184)
+.+..++|..+|-+|
T Consensus 66 ~~~sLKEL~~s~e~d 80 (91)
T 4aj5_A 66 TNNSLKELCESLEED 80 (91)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 334445555555544
No 245
>1eq1_A Apolp-III, apolipophorin-III; five helix-bundle, "helix-short helix-helix" recognition motif, lipid binding protein; NMR {Manduca sexta} SCOP: a.63.1.1
Probab=22.56 E-value=3.6e+02 Score=26.25 Aligned_cols=47 Identities=15% Similarity=0.119 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1098 LYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEENCRQLEFERKKAEK 1156 (1184)
Q Consensus 1098 ~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~e~ekkk~ek 1156 (1184)
-..+..+..+++..-..|...+ +.-.++.+++++.|..++-+||...
T Consensus 115 t~qesqkLaKeVasn~eetN~K------------LaPkiK~Ay~dF~K~aeevqKK~he 161 (166)
T 1eq1_A 115 TVQESQKLAKEVASNMEETNKK------------LAPKIKQAYDDFVKHAEEVQKKLHE 161 (166)
T ss_dssp HHHHHHHHHHHHHSCCCSSCGG------------GHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhHHHHHHH------------hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555555555554333 2244677777777777766666543
No 246
>3hy0_A Alanyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, protein biosynthesis, NUC binding, amino acid-binding, ATP-binding, metal-binding; HET: G5A EPE; 1.90A {Escherichia coli} PDB: 3hxz_A* 3hy1_A* 3hxv_A* 3hxu_A* 3hxw_A* 3hxx_A* 3hxy_A*
Probab=22.23 E-value=1.1e+02 Score=35.70 Aligned_cols=19 Identities=32% Similarity=0.503 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHhhhhcCC
Q 001026 987 KLKRIMQTILSLGNALNHG 1005 (1184)
Q Consensus 987 ~L~~lL~~IL~iGN~LN~g 1005 (1184)
-||+||+-.+..|..|+..
T Consensus 308 VLRRilRRAvr~g~~Lg~~ 326 (441)
T 3hy0_A 308 VLRRIIRRAVRHGNMLGAK 326 (441)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred hHHHHHHHHHHHHHHhCCC
Confidence 4788888888888766543
No 247
>2jo7_A Glycosylphosphatidylinositol-anchored merozoite surface protein; surface antigen, GPI-anchored protein, recombinant vaccine; NMR {Babesia divergens}
Probab=22.23 E-value=1.5e+02 Score=30.45 Aligned_cols=55 Identities=22% Similarity=0.135 Sum_probs=38.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhhhCCCCC-CCCHHHHH
Q 001026 1072 EVSGNFCKLLKEFLSYAEGEVRS------LALLYSSVGRNADALAQYFGEDPA-RCPFEQVV 1126 (1184)
Q Consensus 1072 ~~~d~f~~~m~~Fl~~a~~~l~~------L~~~~~~~~~~~~~l~~yFGEd~~-~~~~e~ff 1126 (1184)
..++....-+.+|.++.+.+.+. -++++..+...+++|+.-|++-.. -.+.|++-
T Consensus 101 tdSEeL~tLLlKFsedlkAeqe~h~~k~es~~L~~~~g~~~~~L~kKf~~~~ptflt~edis 162 (224)
T 2jo7_A 101 TDSEELKTLLLKFSEDLKAEQELHSEAKGGEALLSSMKTQHDELLKKFAALTPTFLTSEDIS 162 (224)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHSSSCCSCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHhHHHHHHHHHHHhcCCCcccHHHHH
Confidence 44677788888888777665432 457788899999999999987443 33555543
No 248
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.01 E-value=2.3e+02 Score=28.27 Aligned_cols=82 Identities=13% Similarity=0.129 Sum_probs=48.3
Q ss_pred cEEEecCCCCCCcchhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCc----------------------------c
Q 001026 22 RVFVFDCCFTTDILEEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQS----------------------------Q 73 (1184)
Q Consensus 22 RIiams~gfPa~~~~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~----------------------------~ 73 (1184)
+|+++. |-|. ...+.=+.-.+.+++.|+++++++.+.+++|.+..... .
T Consensus 3 kilii~-~S~~--~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 79 (201)
T 1t5b_A 3 KVLVLK-SSIL--AGYSQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDE 79 (201)
T ss_dssp EEEEEE-CCSS--GGGCHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHH
T ss_pred eEEEEE-eCCC--CCCChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHH
Confidence 566664 3232 11233445556677778887766679999997653210 0
Q ss_pred cccccccCCceEEecCCCCCCCCCCcHHHHHHHHHHH
Q 001026 74 IGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSS 110 (1184)
Q Consensus 74 ~~~~~~~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i 110 (1184)
+.+.+...+.-|+-+|..|.+.+ ..|..|+..+
T Consensus 80 ~~~~l~~aD~iv~~~P~y~~~~p----~~lK~~iD~~ 112 (201)
T 1t5b_A 80 LIAELKAHDVIVIAAPMYNFNIP----TQLKNYFDLI 112 (201)
T ss_dssp HHHHHHHCSEEEEECCCBTTBCC----HHHHHHHHHH
T ss_pred HHHHHHhCCEEEEEeCcccCcCC----HHHHHHHHHh
Confidence 11223467788999998777655 5566666544
No 249
>3d5a_X RF1, peptide chain release factor 1; ribosome, ribonucleoprotein, ribosomal protein, RNA-binding, binding, metal-binding, zinc-finger; 3.21A {Thermus thermophilus} PDB: 2b64_Y 3d5c_X 3mr8_V 3ms0_V
Probab=21.97 E-value=8.9e+02 Score=27.35 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCC
Q 001026 1083 EFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDP 1117 (1184)
Q Consensus 1083 ~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~ 1117 (1184)
++.+.|+.++..|++.+.+++.....++.--++..
T Consensus 69 e~~~~a~~e~~~l~~~~~~le~~l~~lLlp~~~~D 103 (354)
T 3d5a_X 69 ELKEMAKAEREALLARKEALEKELERHLLPKDPMD 103 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Confidence 35567888888888888888877776664445543
No 250
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=21.90 E-value=6.5e+02 Score=25.72 Aligned_cols=15 Identities=20% Similarity=0.259 Sum_probs=8.9
Q ss_pred HHHHHhhhhcCCCCC
Q 001026 994 TILSLGNALNHGTAR 1008 (1184)
Q Consensus 994 ~IL~iGN~LN~gt~r 1008 (1184)
++-.+..+.|....|
T Consensus 58 icsdlnqifnkedpr 72 (294)
T 3caz_A 58 ICSDLNQIFNKEDPR 72 (294)
T ss_dssp HHHHHTSSCCSCCTT
T ss_pred HHHHHHHHhcccCcc
Confidence 344566667776655
No 251
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=21.82 E-value=2.7e+02 Score=27.29 Aligned_cols=52 Identities=15% Similarity=0.158 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHH
Q 001026 1078 CKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVK 1134 (1184)
Q Consensus 1078 ~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~ 1134 (1184)
.+.|..-.+....++..|+...+.++ .++.++-+. .....+.|++.+.+|+.
T Consensus 82 ~~~L~~q~~~L~~~i~~l~~~l~~l~----~~i~~~~~~-~~~~~~~~~~Li~~~~~ 133 (146)
T 3hh0_A 82 LRQMHFQREVLLAEQERIAKVLSHMD----EMTKKFQKE-ERVNVALFSSFLQTFIW 133 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHTTC-SEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhhcc-cccchHHHHHHHHHHHH
Confidence 34444444555555555554444443 344444332 23355667777766654
No 252
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=21.76 E-value=1.7e+02 Score=28.33 Aligned_cols=49 Identities=12% Similarity=0.055 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1056 GLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGR 1104 (1184)
Q Consensus 1056 ~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~ 1104 (1184)
.|..++..+..........+...+.+..-++..+.++..|+.....++.
T Consensus 59 sl~eI~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~L~~~~~~L~~ 107 (135)
T 1q06_A 59 NLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMRDQLLA 107 (135)
T ss_dssp CHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444544444332222222445556666666666666666655555544
No 253
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=21.69 E-value=3.6e+02 Score=23.14 Aligned_cols=51 Identities=14% Similarity=0.129 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1046 LAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRN 1105 (1184)
Q Consensus 1046 L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~ 1105 (1184)
...+.+.+...+..+..|+...... |.|.+- .....+++.|..+++.+.+.
T Consensus 4 ~~~~~~~l~~E~~~lk~E~~stSaQ----DeFAKW-----aKL~Rk~DKl~~ele~l~~~ 54 (65)
T 3sja_C 4 LSKKYLAKVKERHELKEFNNSISAQ----DNYAKW-----TKNNRKLDSLDKEINNLKDE 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTT----TTHHHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccchH----HHHHHH-----HHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888888765432 666642 22344444444444444443
No 254
>4dnd_A Syntaxin-10, SYN10; structural genomics, protein structure initiative, nysgrc, P biology, NEW YORK structural genomics research consortium; HET: MSE; 1.40A {Homo sapiens} PDB: 1lvf_A
Probab=21.57 E-value=2.1e+02 Score=27.82 Aligned_cols=56 Identities=14% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCC---ccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1044 KFLAEEMQAISKGLEKVVQELTASENDG---EVSGNFCKLLKEFLSYAEGEVRSLALLY 1099 (1184)
Q Consensus 1044 ~~L~~El~~l~k~L~kv~~el~~s~~d~---~~~d~f~~~m~~Fl~~a~~~l~~L~~~~ 1099 (1184)
.+|...|+.++..|+.+.+.+...+.+. +..+.-...=+.|+..++.+|..+++.+
T Consensus 70 ~EL~~~l~sie~dLeDLe~sI~ivE~np~kF~l~~~Ei~~Rr~fV~~~r~~I~~mk~~l 128 (130)
T 4dnd_A 70 NELRNGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHM 128 (130)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHh
No 255
>2vs0_A Virulence factor ESXA; secreted, four helical bundle, cell invasion; 1.4A {Staphylococcus aureus} PDB: 2vrz_A
Probab=21.56 E-value=4e+02 Score=23.16 Aligned_cols=57 Identities=7% Similarity=0.044 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADALAQYF-GEDPARCPFEQVVSTLLNFVKMFVLAHE 1141 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yF-GEd~~~~~~e~ff~~l~~F~~~fk~a~e 1141 (1184)
.|.............|+..+.+++.....|.... |+.. +.|...+.++...+.+..+
T Consensus 10 ~l~~~A~~~~~~~~~l~~~l~~L~~~~~~L~~~W~G~a~-----~af~~~~~~~~~~~~~~~~ 67 (97)
T 2vs0_A 10 EIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAF-----SRFEEQFQQLSPKVEKFAQ 67 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSTT-----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH-----HHHHHHHHHHHHHHHHHHH
Confidence 4444455555555566666666666666665443 4422 4566655555555554443
No 256
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=21.46 E-value=1e+02 Score=34.18 Aligned_cols=29 Identities=7% Similarity=0.198 Sum_probs=18.3
Q ss_pred cCCCcEEEEEecCCCCCchHHHHHHHHHHhh
Q 001026 116 LGHQNVLLMHCERGGWPVLAFMLAALLIYRK 146 (1184)
Q Consensus 116 ~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~ 146 (1184)
.+.+.-|||+|..|..| +..++-+|.+.|
T Consensus 108 i~~~~~vVvyc~~g~~~--a~~a~~~L~~~G 136 (318)
T 3hzu_A 108 IARDDTVVIYGDKSNWW--AAYALWVFTLFG 136 (318)
T ss_dssp CCTTCEEEEECSGGGHH--HHHHHHHHHHTT
T ss_pred CCCCCeEEEECCCCCcc--HHHHHHHHHHcC
Confidence 35677899999876645 444444454444
No 257
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=21.31 E-value=3.4e+02 Score=27.46 Aligned_cols=96 Identities=9% Similarity=0.012 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGE-------DPARCPFEQVVSTLLNFVKMFVLAHEENCRQL 1147 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGE-------d~~~~~~e~ff~~l~~F~~~fk~a~ee~~k~~ 1147 (1184)
+...+.-..-++.-..++..++...+++.+-+..-+.|+-+ .++...+..+++.|.+=.......+++..++.
T Consensus 22 ek~~~~k~~~le~ek~~l~~~e~~r~k~~~h~~~k~~qlre~~d~gtt~~~i~~m~~yI~llrErea~lEqkVaeq~e~V 101 (169)
T 3k29_A 22 EKVVKEKRRLLELEQEKLRERESERDKVKNHYMQKIRQLREQLDDGTTSDAILKMKAYIKVVAIQLSEEEEKVNKQKENV 101 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHhhhccc
Q 001026 1148 EFERKKAEKAVENEKLKTQKGQS 1170 (1184)
Q Consensus 1148 e~ekkk~ekeaekek~k~~~~e~ 1170 (1184)
+.+++..+...+.-...++..++
T Consensus 102 e~e~q~Le~ar~el~qArke~eK 124 (169)
T 3k29_A 102 LAASKELERAEVELTKRRKEEEK 124 (169)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
No 258
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=21.09 E-value=4.9e+02 Score=23.97 Aligned_cols=8 Identities=38% Similarity=0.576 Sum_probs=3.1
Q ss_pred HHHHHHhh
Q 001026 1159 ENEKLKTQ 1166 (1184)
Q Consensus 1159 ekek~k~~ 1166 (1184)
-++|++++
T Consensus 88 H~~Klrr~ 95 (98)
T 3f1i_H 88 HREKLRRA 95 (98)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 34444433
No 259
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=20.99 E-value=2e+02 Score=25.71 Aligned_cols=27 Identities=19% Similarity=0.242 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 001026 1042 QLKFLAEEMQAISKGLEKVVQELTASE 1068 (1184)
Q Consensus 1042 ~L~~L~~El~~l~k~L~kv~~el~~s~ 1068 (1184)
+..+|..||+.|+-.+..+++|-..++
T Consensus 20 ~~E~L~qEi~~Lr~kv~elEnErlQyE 46 (81)
T 3qh9_A 20 KAEELLQELRHLKIKVEELENERNQYE 46 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788888877777777655544
No 260
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=20.95 E-value=5.6e+02 Score=24.54 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHH
Q 001026 1045 FLAEEMQAISKGLEKVVQELTASENDGEVSGNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALAQYFGEDPARCPFEQ 1124 (1184)
Q Consensus 1045 ~L~~El~~l~k~L~kv~~el~~s~~d~~~~d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ 1124 (1184)
++..+++.|...+..+.+.=. .. ...-+.-.+.|...+.....++.++......+..-=+. + .
T Consensus 6 ~i~~~l~~Leae~q~L~~~E~---------qr-y~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~---~----~ 68 (119)
T 3etw_A 6 SLVGELQALDAEYQNLANQEE---------AR-FNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANT---R----F 68 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS---C----T
T ss_pred hHHHHHHHHHHHHHHHHHHHH---------HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---c----h
Confidence 345556666665555543321 12 23344455677788888888888888777776652211 1 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1125 VVSTLLNFVKMFVLAHEENCRQLEFERKK 1153 (1184)
Q Consensus 1125 ff~~l~~F~~~fk~a~ee~~k~~e~ekkk 1153 (1184)
|=..+...+..|++.+++..++....++.
T Consensus 69 yk~~y~~l~k~Y~~~~keLd~~ik~qeki 97 (119)
T 3etw_A 69 YKSQYQELASKYEDALKKLEAEMEQQKAV 97 (119)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22355566677777776665555444433
No 261
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=20.88 E-value=1.5e+02 Score=22.13 Aligned_cols=30 Identities=13% Similarity=0.173 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 001026 1086 SYAEGEVRSLALLYSSVGRNADALAQYFGE 1115 (1184)
Q Consensus 1086 ~~a~~~l~~L~~~~~~~~~~~~~l~~yFGE 1115 (1184)
++.+++++.|-+....+.+....|...+||
T Consensus 4 nQledKvEel~~~~~~l~nEv~Rl~~lLg~ 33 (34)
T 2r2v_A 4 KQVADKLEEVASKLYHNANELARVAKLLGE 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhcC
Confidence 456666777776777777777777777775
No 262
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=20.59 E-value=3.2e+02 Score=27.83 Aligned_cols=30 Identities=10% Similarity=-0.058 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1079 KLLKEFLSYAEGEVRSLALLYSSVGRNADA 1108 (1184)
Q Consensus 1079 ~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~ 1108 (1184)
.+|++..++...+...|.+.+...+.+..+
T Consensus 74 ~ql~~I~~e~r~~~~~Lr~ql~akr~EL~a 103 (175)
T 3lay_A 74 ATAQKIYDDYYTQTSALRQQLISKRYEYNA 103 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444454444444443433
No 263
>1jth_B Syntaxin 1A; coiled-coil, polar layer, endocytosis-exocytosis complex; 2.00A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 1hvv_A* 1urq_B
Probab=20.36 E-value=1.6e+02 Score=25.61 Aligned_cols=29 Identities=10% Similarity=0.008 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 001026 1085 LSYAEGEVRSLALLYSSVGRNADALAQYF 1113 (1184)
Q Consensus 1085 l~~a~~~l~~L~~~~~~~~~~~~~l~~yF 1113 (1184)
+++-..++..|++...++...|.+|....
T Consensus 5 i~eR~~ei~~ie~~i~eL~~iF~dla~lV 33 (77)
T 1jth_B 5 IETRHSEIIKLENSIRELHDMFMDMAMLV 33 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556666665555555554443
No 264
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=20.25 E-value=63 Score=29.65 Aligned_cols=28 Identities=11% Similarity=0.083 Sum_probs=17.4
Q ss_pred CCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 117 GHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 117 d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
+.+.-+||+|..| .| +..+|.+|...|+
T Consensus 53 ~~~~~ivvyC~~G-~r--s~~aa~~L~~~G~ 80 (108)
T 3gk5_A 53 ERDKKYAVICAHG-NR--SAAAVEFLSQLGL 80 (108)
T ss_dssp CTTSCEEEECSSS-HH--HHHHHHHHHTTTC
T ss_pred CCCCeEEEEcCCC-cH--HHHHHHHHHHcCC
Confidence 5556799999543 44 4555656655543
No 265
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=20.24 E-value=1.1e+02 Score=31.14 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=49.7
Q ss_pred hhHHhhccHHHHHHHHhhhCCCCcEEEEEeccCCcCcccccccccCCceEEecCCCCCCCCCCcHHHHHHHHHHHHHHHh
Q 001026 36 EEEEYKEYLGGIVGQLREYFPEASFMVFNFREGEHQSQIGQVLSEYDMTVMDYPRHYEGCPLLTMETVHHFLRSSESWLS 115 (1184)
Q Consensus 36 ~e~~YRN~i~dV~~fL~~~H~~~~y~V~Nl~ee~~~~~~~~~~~~f~~~V~~~P~~~~~~p~p~L~~l~~~c~~i~~WL~ 115 (1184)
.+..++..|....+.|++..+. .-..|-.=-..+.....+++.+.+.+++.|-.+-.||....-+.|...++ .
T Consensus 73 s~~~~~~ei~~~~~~l~~~~G~-~~~~fr~P~G~~~~~~~~~~~~~G~~~v~w~~d~~Dw~~~~~~~i~~~~~------~ 145 (195)
T 2cc0_A 73 GQAQMDSEISRTQQAIAGAGGG-TPKLFRPPYGETNATLRSVEAKYGLTEVIWDVDSQDWNNASTDAIVQAVS------R 145 (195)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSC-CCSEECCGGGCCCHHHHHHHHHTTCEECCCSEECCGGGTCCHHHHHHHHH------T
T ss_pred CHHHHHHHHHHHHHHHHHHhCC-CCCEEECCCCCcCHHHHHHHHHCCCeEEEeccCCCccCCCCHHHHHHHHh------C
Confidence 3566778888888888876554 23344332333333333445566666665543444555556666554332 3
Q ss_pred cCCCcEEEEEec
Q 001026 116 LGHQNVLLMHCE 127 (1184)
Q Consensus 116 ~d~~NVvvvHCk 127 (1184)
..+..|+++|+.
T Consensus 146 ~~~g~IiL~Hd~ 157 (195)
T 2cc0_A 146 LGNGQVILMHDW 157 (195)
T ss_dssp CCTTCEEEEESS
T ss_pred cCcCeEEEECCC
Confidence 356689999984
No 266
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=20.23 E-value=78 Score=33.86 Aligned_cols=33 Identities=24% Similarity=0.019 Sum_probs=21.0
Q ss_pred HHhcCCCcEEEEEecCCCCCchHHHHHHHHHHhhC
Q 001026 113 WLSLGHQNVLLMHCERGGWPVLAFMLAALLIYRKQ 147 (1184)
Q Consensus 113 WL~~d~~NVvvvHCk~Gkgr~tg~mia~yLly~~~ 147 (1184)
+|..+.+..|||+|..|.+| +..++.+|.+.|.
T Consensus 75 ~~gi~~~~~vvvyc~~g~~~--s~~a~~~L~~~G~ 107 (271)
T 1e0c_A 75 ELGHRPEAVYVVYDDEGGGW--AGRFIWLLDVIGQ 107 (271)
T ss_dssp HHTCCTTCEEEEECSSSSHH--HHHHHHHHHHTTC
T ss_pred HcCCCCCCeEEEEcCCCCcc--HHHHHHHHHHcCC
Confidence 33346677899999877645 4455555665553
No 267
>1o3x_A ADP-ribosylation factor binding protein GGA1; protein transport; 2.10A {Homo sapiens} SCOP: a.7.8.1 PDB: 1nwm_X 1x79_A
Probab=20.19 E-value=6.2e+02 Score=24.77 Aligned_cols=48 Identities=10% Similarity=0.121 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1093 RSLALLYSSVGRNADALAQYFGEDPARCPFEQVVSTLLNFVKMFVLAHEEN 1143 (1184)
Q Consensus 1093 ~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ee~ 1143 (1184)
+.++++|..++..-..+..+..+.... ++.+..+.++=..+.++...+
T Consensus 82 Ell~eL~~~ck~~qp~i~~li~e~~dd---ee~l~elL~~ND~ln~vl~kY 129 (140)
T 1o3x_A 82 DLMKELYQRCERMRPTLFRLASDTEDN---DEALAEILQANDNLTQVINLY 129 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCC---HHHHHHHHHhhHHHHHHHHHH
Confidence 445566666666666666666553222 455665555555555555544
No 268
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=20.19 E-value=4.8e+02 Score=23.54 Aligned_cols=36 Identities=11% Similarity=0.093 Sum_probs=24.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001026 1075 GNFCKLLKEFLSYAEGEVRSLALLYSSVGRNADALA 1110 (1184)
Q Consensus 1075 d~f~~~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~ 1110 (1184)
+.....+..-++.++.++..|++.+..+++.+.++-
T Consensus 64 ~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk 99 (107)
T 1fxk_A 64 DELTEELQEKLETLQLREKTIERQEERVMKKLQEMQ 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777777777777666665543
No 269
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=20.11 E-value=4.3e+02 Score=22.91 Aligned_cols=56 Identities=7% Similarity=0.051 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001026 1080 LLKEFLSYAEGEVRSLALLYSSVGRNADALA-QYFGEDPARCPFEQVVSTLLNFVKMFVLAH 1140 (1184)
Q Consensus 1080 ~m~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~-~yFGEd~~~~~~e~ff~~l~~F~~~fk~a~ 1140 (1184)
.|...-.........|+..+.+++.....|. .|-|+ ..+.|...+.++...+.+..
T Consensus 13 ~l~~~A~~~~~~~~~i~~~l~~L~~~~~~L~~~W~G~-----a~~af~~~~~~~~~~~~~~~ 69 (93)
T 4ioe_A 13 ELERIAGNFKNAAGEAQSQINRLEGDINSLEGQWAGA-----TQAKFRGEFIQSKQAMQQYI 69 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHH-----HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCch-----hhHHHHHHHHHHHHHHHHHH
Confidence 3444444444445555555555555555553 22232 23455555555554444443
Done!