Query 001027
Match_columns 1184
No_of_seqs 407 out of 3349
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:14:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ar4_A Sarcoplasmic/endoplasmi 100.0 7E-106 2E-110 1048.6 66.7 889 86-1148 30-992 (995)
2 3ixz_A Potassium-transporting 100.0 1E-104 4E-109 1038.1 70.0 877 84-1150 76-1025(1034)
3 2zxe_A Na, K-ATPase alpha subu 100.0 4E-105 1E-109 1040.6 55.3 872 86-1148 73-1017(1028)
4 1mhs_A Proton pump, plasma mem 100.0 1.8E-95 6E-100 925.7 48.7 771 85-1149 92-882 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 1.9E-94 6.4E-99 917.8 -17.2 779 85-1148 37-844 (885)
6 3rfu_A Copper efflux ATPase; a 100.0 1.3E-70 4.5E-75 686.6 38.6 517 146-979 188-719 (736)
7 3j08_A COPA, copper-exporting 100.0 2.3E-69 7.8E-74 671.6 41.8 488 148-956 98-597 (645)
8 3j09_A COPA, copper-exporting 100.0 3.9E-69 1.3E-73 678.5 44.1 488 147-956 175-675 (723)
9 2yj3_A Copper-transporting ATP 99.8 2.5E-25 8.4E-30 247.7 0.0 136 720-941 124-262 (263)
10 3a1c_A Probable copper-exporti 99.9 2E-20 6.9E-25 210.9 24.4 272 442-940 14-287 (287)
11 3skx_A Copper-exporting P-type 99.8 1.1E-18 3.7E-23 195.1 24.3 273 448-948 1-276 (280)
12 2hc8_A PACS, cation-transporti 99.8 2.8E-19 9.4E-24 170.3 8.3 96 171-317 6-101 (113)
13 2kij_A Copper-transporting ATP 99.7 8.1E-18 2.8E-22 163.1 6.0 96 171-317 12-113 (124)
14 3gwi_A Magnesium-transporting 99.7 7.5E-18 2.5E-22 173.2 3.4 125 572-732 33-165 (170)
15 4fe3_A Cytosolic 5'-nucleotida 99.7 6E-18 2.1E-22 191.6 2.6 139 729-923 138-285 (297)
16 3mn1_A Probable YRBI family ph 99.0 6.8E-10 2.3E-14 116.5 10.4 137 722-950 42-187 (189)
17 3n28_A Phosphoserine phosphata 98.7 2.4E-08 8.4E-13 114.5 9.6 151 732-950 178-333 (335)
18 1k1e_A Deoxy-D-mannose-octulos 98.7 4.4E-08 1.5E-12 101.7 10.2 129 733-947 36-173 (180)
19 3n07_A 3-deoxy-D-manno-octulos 98.7 2.5E-08 8.5E-13 105.0 7.6 96 740-920 60-158 (195)
20 3ij5_A 3-deoxy-D-manno-octulos 98.7 4.5E-08 1.6E-12 104.3 9.6 107 723-920 73-182 (211)
21 3mmz_A Putative HAD family hyd 98.6 1.1E-07 3.6E-12 98.5 10.9 106 740-931 47-161 (176)
22 3ewi_A N-acylneuraminate cytid 98.6 7.4E-08 2.5E-12 98.7 9.4 107 720-920 30-141 (168)
23 4dw8_A Haloacid dehalogenase-l 98.6 1.3E-07 4.5E-12 105.1 12.2 200 731-935 21-276 (279)
24 3dnp_A Stress response protein 98.6 2.1E-07 7.1E-12 104.1 13.5 79 863-942 201-288 (290)
25 3mpo_A Predicted hydrolase of 98.6 3.1E-07 1.1E-11 102.0 13.6 203 731-935 21-276 (279)
26 3e8m_A Acylneuraminate cytidyl 98.6 1.4E-07 4.7E-12 96.1 9.4 109 740-935 39-157 (164)
27 1l6r_A Hypothetical protein TA 98.5 1.7E-07 5.9E-12 101.1 8.8 174 730-921 20-212 (227)
28 3n1u_A Hydrolase, HAD superfam 98.5 1.2E-07 4E-12 99.5 7.2 114 741-940 55-177 (191)
29 4ap9_A Phosphoserine phosphata 98.4 3.3E-07 1.1E-11 95.7 7.3 117 732-927 79-195 (201)
30 3m1y_A Phosphoserine phosphata 98.3 7.3E-07 2.5E-11 94.5 8.3 130 731-928 74-209 (217)
31 2r8e_A 3-deoxy-D-manno-octulos 98.3 9.5E-07 3.3E-11 92.2 8.5 109 740-934 61-180 (188)
32 3dao_A Putative phosphatse; st 98.3 4.9E-06 1.7E-10 92.7 14.8 185 732-921 39-270 (283)
33 1l7m_A Phosphoserine phosphata 98.3 1.5E-06 5E-11 91.4 9.0 126 731-924 75-206 (211)
34 3pgv_A Haloacid dehalogenase-l 98.3 3.5E-06 1.2E-10 94.0 12.1 53 863-916 208-263 (285)
35 3kd3_A Phosphoserine phosphohy 98.2 3.9E-06 1.3E-10 88.5 10.2 134 732-928 82-218 (219)
36 2pq0_A Hypothetical conserved 98.2 2.8E-05 9.4E-10 85.2 16.4 180 731-921 19-242 (258)
37 3p96_A Phosphoserine phosphata 98.2 3.3E-06 1.1E-10 99.7 9.5 117 732-920 256-380 (415)
38 3l7y_A Putative uncharacterize 98.1 5.2E-06 1.8E-10 93.6 10.6 58 862-920 226-286 (304)
39 4eze_A Haloacid dehalogenase-l 98.1 4.1E-06 1.4E-10 95.0 9.6 120 732-919 179-302 (317)
40 1svj_A Potassium-transporting 98.1 1.1E-05 3.7E-10 80.9 11.5 106 571-735 49-156 (156)
41 1y8a_A Hypothetical protein AF 98.1 5.1E-06 1.8E-10 94.9 9.5 76 862-941 205-291 (332)
42 3fzq_A Putative hydrolase; YP_ 98.1 1.4E-05 4.9E-10 88.0 12.6 59 863-922 199-260 (274)
43 1rku_A Homoserine kinase; phos 98.1 3.7E-05 1.3E-09 80.7 14.6 124 732-927 69-195 (206)
44 3r4c_A Hydrolase, haloacid deh 98.1 3.8E-05 1.3E-09 84.4 14.9 58 863-921 193-253 (268)
45 3m9l_A Hydrolase, haloacid deh 98.0 7E-06 2.4E-10 86.3 8.3 129 731-935 69-202 (205)
46 1rkq_A Hypothetical protein YI 98.0 2E-05 6.8E-10 87.8 12.3 61 859-920 191-256 (282)
47 1nnl_A L-3-phosphoserine phosp 98.0 6.9E-06 2.4E-10 87.7 8.2 130 731-927 85-222 (225)
48 4ex6_A ALNB; modified rossman 98.0 9.2E-06 3.1E-10 87.2 9.1 122 731-927 103-231 (237)
49 2p9j_A Hypothetical protein AQ 97.9 1.9E-05 6.7E-10 79.8 9.3 104 733-922 37-144 (162)
50 3fvv_A Uncharacterized protein 97.9 2.4E-05 8.3E-10 83.8 10.3 109 732-906 92-207 (232)
51 3mc1_A Predicted phosphatase, 97.9 3E-05 1E-09 82.4 10.3 120 731-928 85-214 (226)
52 4gxt_A A conserved functionall 97.9 1.1E-05 3.8E-10 93.6 6.9 41 731-771 220-260 (385)
53 1te2_A Putative phosphatase; s 97.9 2.8E-05 9.5E-10 82.2 9.1 118 732-926 94-219 (226)
54 1nrw_A Hypothetical protein, h 97.8 0.00022 7.6E-09 79.4 16.1 58 864-922 216-276 (288)
55 3s6j_A Hydrolase, haloacid deh 97.8 2.8E-05 9.6E-10 82.8 7.6 123 731-928 90-219 (233)
56 1u02_A Trehalose-6-phosphate p 97.8 5.1E-05 1.8E-09 82.2 9.7 56 858-920 152-211 (239)
57 2hsz_A Novel predicted phospha 97.8 2.5E-05 8.6E-10 84.6 6.9 42 731-772 113-154 (243)
58 3sd7_A Putative phosphatase; s 97.8 5E-05 1.7E-09 81.7 9.2 121 731-928 109-239 (240)
59 2b30_A Pvivax hypothetical pro 97.8 5.1E-05 1.7E-09 85.3 9.6 60 859-919 217-281 (301)
60 2pib_A Phosphorylated carbohyd 97.8 5.1E-05 1.7E-09 79.5 9.0 124 731-928 83-212 (216)
61 1wr8_A Phosphoglycolate phosph 97.8 0.00021 7E-09 76.9 14.0 173 731-921 19-212 (231)
62 2nyv_A Pgpase, PGP, phosphogly 97.7 3.8E-05 1.3E-09 81.9 7.8 125 731-928 82-208 (222)
63 2zos_A MPGP, mannosyl-3-phosph 97.7 8.8E-05 3E-09 80.9 10.6 58 863-920 178-239 (249)
64 1rlm_A Phosphatase; HAD family 97.7 0.00013 4.5E-09 80.5 11.9 59 862-921 189-250 (271)
65 1nf2_A Phosphatase; structural 97.7 0.0001 3.5E-09 81.2 10.8 61 859-920 183-248 (268)
66 2go7_A Hydrolase, haloacid deh 97.7 4.4E-05 1.5E-09 79.2 7.4 117 731-927 84-203 (207)
67 3kzx_A HAD-superfamily hydrola 97.7 0.00011 3.9E-09 78.3 10.1 116 731-928 102-225 (231)
68 2hcf_A Hydrolase, haloacid deh 97.6 7.2E-05 2.5E-09 79.7 8.2 41 732-772 93-134 (234)
69 3d6j_A Putative haloacid dehal 97.6 6.7E-05 2.3E-09 79.2 7.9 41 732-772 89-129 (225)
70 3nas_A Beta-PGM, beta-phosphog 97.6 8.2E-05 2.8E-09 79.4 7.9 117 732-924 92-208 (233)
71 2fea_A 2-hydroxy-3-keto-5-meth 97.6 0.00012 4.1E-09 78.9 9.2 137 731-928 76-215 (236)
72 2rbk_A Putative uncharacterize 97.6 0.00023 7.9E-09 77.9 11.6 64 863-927 186-254 (261)
73 3zx4_A MPGP, mannosyl-3-phosph 97.6 0.00016 5.5E-09 79.2 10.0 54 863-920 175-233 (259)
74 3ddh_A Putative haloacid dehal 97.6 0.00016 5.5E-09 76.6 9.6 116 732-927 105-232 (234)
75 3um9_A Haloacid dehalogenase, 97.6 8.2E-05 2.8E-09 79.1 7.1 120 731-927 95-222 (230)
76 3e58_A Putative beta-phosphogl 97.5 6E-05 2.1E-09 78.8 5.5 120 732-926 89-212 (214)
77 2om6_A Probable phosphoserine 97.5 0.00014 4.8E-09 77.3 8.2 121 732-927 99-228 (235)
78 3nuq_A Protein SSM1, putative 97.5 6.8E-05 2.3E-09 83.0 5.5 126 731-927 141-277 (282)
79 3iru_A Phoshonoacetaldehyde hy 97.5 0.00015 5.1E-09 79.5 8.1 41 732-772 111-151 (277)
80 2hoq_A Putative HAD-hydrolase 97.5 0.00042 1.5E-08 74.5 11.5 41 732-772 94-134 (241)
81 1swv_A Phosphonoacetaldehyde h 97.5 0.00012 4E-09 80.2 7.1 41 731-771 102-142 (267)
82 3l8h_A Putative haloacid dehal 97.5 0.00022 7.4E-09 73.2 8.6 54 876-929 117-176 (179)
83 2wf7_A Beta-PGM, beta-phosphog 97.5 0.0001 3.6E-09 77.6 6.3 47 876-924 161-207 (221)
84 3umb_A Dehalogenase-like hydro 97.4 0.00014 4.7E-09 77.5 6.1 123 731-928 98-226 (233)
85 3ed5_A YFNB; APC60080, bacillu 97.4 0.00058 2E-08 72.7 10.8 122 731-928 102-230 (238)
86 3qxg_A Inorganic pyrophosphata 97.4 0.00019 6.3E-09 77.4 6.7 123 731-927 108-237 (243)
87 2hi0_A Putative phosphoglycola 97.3 0.00056 1.9E-08 73.6 10.2 40 732-771 110-149 (240)
88 4eek_A Beta-phosphoglucomutase 97.3 0.00021 7.2E-09 77.8 6.8 127 730-929 108-245 (259)
89 2hdo_A Phosphoglycolate phosph 97.3 0.00012 4E-09 76.9 4.4 40 731-771 82-121 (209)
90 1xvi_A MPGP, YEDP, putative ma 97.3 0.0016 5.5E-08 71.9 13.5 40 732-771 26-65 (275)
91 3dv9_A Beta-phosphoglucomutase 97.3 0.00023 8E-09 76.4 6.5 126 730-928 106-237 (247)
92 2ah5_A COG0546: predicted phos 97.3 0.00053 1.8E-08 72.2 9.0 118 732-927 84-208 (210)
93 3u26_A PF00702 domain protein; 97.3 0.00056 1.9E-08 72.7 9.2 120 732-928 100-226 (234)
94 1s2o_A SPP, sucrose-phosphatas 97.3 0.00046 1.6E-08 74.9 8.4 62 859-921 155-228 (244)
95 2no4_A (S)-2-haloacid dehaloge 97.3 0.0004 1.4E-08 74.6 7.8 41 732-772 105-145 (240)
96 3qnm_A Haloacid dehalogenase-l 97.2 0.00061 2.1E-08 72.6 8.3 121 732-928 107-232 (240)
97 2wm8_A MDP-1, magnesium-depend 97.2 0.00063 2.2E-08 70.4 8.1 42 731-772 67-109 (187)
98 1zrn_A L-2-haloacid dehalogena 97.2 0.00029 9.9E-09 75.1 5.6 41 732-772 95-135 (232)
99 2gmw_A D,D-heptose 1,7-bisphos 97.0 0.0011 3.9E-08 70.0 8.6 53 876-928 147-203 (211)
100 3l5k_A Protein GS1, haloacid d 97.0 0.00022 7.6E-09 77.1 2.9 50 878-927 191-242 (250)
101 2fi1_A Hydrolase, haloacid deh 97.0 0.0016 5.5E-08 66.7 9.2 39 732-771 82-120 (190)
102 2fdr_A Conserved hypothetical 97.0 0.0012 4.1E-08 69.9 7.8 53 876-928 159-219 (229)
103 3umg_A Haloacid dehalogenase; 96.9 0.0013 4.3E-08 70.7 7.3 122 732-931 116-249 (254)
104 3umc_A Haloacid dehalogenase; 96.9 0.00073 2.5E-08 72.9 5.2 119 732-928 120-250 (254)
105 1qq5_A Protein (L-2-haloacid d 96.9 0.0014 4.9E-08 70.9 7.6 39 732-772 93-131 (253)
106 2w43_A Hypothetical 2-haloalka 96.9 0.0013 4.3E-08 68.5 6.8 120 731-927 73-196 (201)
107 3gyg_A NTD biosynthesis operon 96.9 0.0011 3.7E-08 73.7 6.7 59 863-922 210-271 (289)
108 3k1z_A Haloacid dehalogenase-l 96.8 0.001 3.4E-08 72.8 5.9 122 732-928 106-235 (263)
109 2fue_A PMM 1, PMMH-22, phospho 96.8 0.0067 2.3E-07 66.3 12.1 55 864-920 197-257 (262)
110 2qlt_A (DL)-glycerol-3-phospha 96.8 0.0014 4.9E-08 72.1 6.7 40 732-771 114-154 (275)
111 2pke_A Haloacid delahogenase-l 96.7 0.0051 1.7E-07 66.3 10.6 39 732-771 112-150 (251)
112 3ib6_A Uncharacterized protein 96.7 0.0045 1.6E-07 64.0 9.8 42 731-772 33-77 (189)
113 3f9r_A Phosphomannomutase; try 96.6 0.0066 2.3E-07 65.8 10.0 42 864-906 187-233 (246)
114 2o2x_A Hypothetical protein; s 96.5 0.0012 4.1E-08 70.1 4.0 29 731-759 55-83 (218)
115 2x4d_A HLHPP, phospholysine ph 96.5 0.053 1.8E-06 58.5 17.3 40 733-772 33-75 (271)
116 3pdw_A Uncharacterized hydrola 96.5 0.014 4.8E-07 63.6 12.5 44 731-774 21-67 (266)
117 3smv_A S-(-)-azetidine-2-carbo 96.5 0.0018 6.3E-08 68.7 4.8 53 876-928 171-234 (240)
118 1vjr_A 4-nitrophenylphosphatas 96.3 0.03 1E-06 61.0 13.8 43 731-773 32-77 (271)
119 3vay_A HAD-superfamily hydrola 96.1 0.0054 1.8E-07 64.8 5.9 53 876-928 171-226 (230)
120 3cnh_A Hydrolase family protei 96.0 0.0024 8.3E-08 66.1 2.8 40 732-772 86-125 (200)
121 2gfh_A Haloacid dehalogenase-l 96.0 0.0099 3.4E-07 64.8 7.7 40 732-772 121-160 (260)
122 3kbb_A Phosphorylated carbohyd 95.9 0.022 7.5E-07 59.6 9.5 42 732-773 84-125 (216)
123 2oda_A Hypothetical protein ps 95.8 0.029 1E-06 58.4 9.8 34 732-765 36-69 (196)
124 3qgm_A P-nitrophenyl phosphata 95.8 0.014 4.8E-07 63.6 7.6 45 730-774 22-69 (268)
125 3epr_A Hydrolase, haloacid deh 95.7 0.025 8.6E-07 61.6 9.3 43 732-775 22-67 (264)
126 2c4n_A Protein NAGD; nucleotid 95.6 0.056 1.9E-06 57.3 11.6 61 863-923 176-246 (250)
127 2i6x_A Hydrolase, haloacid deh 95.6 0.0026 8.8E-08 66.5 0.9 36 732-768 89-124 (211)
128 2kmv_A Copper-transporting ATP 95.6 0.13 4.4E-06 52.8 13.4 52 638-732 134-185 (185)
129 2pr7_A Haloacid dehalogenase/e 95.4 0.0027 9.4E-08 61.2 0.0 41 731-771 17-57 (137)
130 3nvb_A Uncharacterized protein 95.2 0.017 5.7E-07 66.3 5.7 34 735-768 259-292 (387)
131 1qyi_A ZR25, hypothetical prot 95.1 0.058 2E-06 62.2 10.1 42 732-773 215-256 (384)
132 4gib_A Beta-phosphoglucomutase 95.0 0.024 8.3E-07 61.2 6.3 116 730-924 114-232 (250)
133 2b0c_A Putative phosphatase; a 95.0 0.0017 5.8E-08 67.5 -2.9 30 732-761 91-120 (206)
134 2zg6_A Putative uncharacterize 94.8 0.036 1.2E-06 58.3 6.7 40 732-772 95-134 (220)
135 3pct_A Class C acid phosphatas 94.4 0.073 2.5E-06 57.6 7.9 43 730-772 99-145 (260)
136 2amy_A PMM 2, phosphomannomuta 94.2 0.011 3.7E-07 63.9 0.9 52 864-917 188-245 (246)
137 2oyc_A PLP phosphatase, pyrido 93.9 0.2 6.8E-06 55.7 10.5 43 730-772 35-80 (306)
138 2ho4_A Haloacid dehalogenase-l 93.9 0.54 1.8E-05 50.2 13.7 65 864-928 180-254 (259)
139 2p11_A Hypothetical protein; p 93.3 0.14 4.8E-06 54.1 7.6 40 731-771 95-134 (231)
140 4dcc_A Putative haloacid dehal 93.2 0.021 7.3E-07 60.4 1.1 34 732-766 112-145 (229)
141 3ocu_A Lipoprotein E; hydrolas 93.2 0.1 3.5E-06 56.5 6.3 43 730-772 99-145 (262)
142 2i33_A Acid phosphatase; HAD s 93.2 0.13 4.3E-06 56.0 7.1 43 730-772 99-144 (258)
143 2fpr_A Histidine biosynthesis 92.6 0.038 1.3E-06 56.3 1.9 41 732-772 42-97 (176)
144 4as2_A Phosphorylcholine phosp 92.2 0.092 3.1E-06 59.1 4.5 43 727-769 138-180 (327)
145 1ltq_A Polynucleotide kinase; 91.6 0.087 3E-06 58.5 3.4 33 729-761 185-217 (301)
146 1yns_A E-1 enzyme; hydrolase f 89.3 0.43 1.5E-05 51.8 6.3 38 731-768 129-166 (261)
147 4g9b_A Beta-PGM, beta-phosphog 88.8 0.64 2.2E-05 49.6 7.2 40 731-772 94-133 (243)
148 1yv9_A Hydrolase, haloacid deh 88.0 0.91 3.1E-05 48.8 7.9 42 731-772 20-65 (264)
149 1zjj_A Hypothetical protein PH 87.8 3.4 0.00012 44.3 12.4 42 730-771 15-59 (263)
150 2arf_A Wilson disease ATPase; 85.9 2.8 9.6E-05 41.9 9.5 36 641-681 118-153 (165)
151 2b82_A APHA, class B acid phos 84.4 0.16 5.6E-06 53.3 -0.5 29 733-761 89-117 (211)
152 3zvl_A Bifunctional polynucleo 78.1 3.3 0.00011 48.1 7.5 26 733-758 88-113 (416)
153 2obb_A Hypothetical protein; s 75.5 2.4 8.4E-05 41.2 4.5 39 733-771 25-66 (142)
154 3i28_A Epoxide hydrolase 2; ar 75.0 1.1 3.7E-05 53.3 2.3 26 732-757 100-125 (555)
155 2hx1_A Predicted sugar phospha 62.6 43 0.0015 35.8 11.8 43 730-772 28-73 (284)
156 3bwv_A Putative 5'(3')-deoxyri 62.0 15 0.00052 36.5 7.4 25 732-757 69-93 (180)
157 2hhl_A CTD small phosphatase-l 60.4 4.7 0.00016 41.5 3.1 41 731-772 67-107 (195)
158 2ght_A Carboxy-terminal domain 53.0 3.8 0.00013 41.5 1.0 41 731-772 54-94 (181)
159 2i7d_A 5'(3')-deoxyribonucleot 51.8 4.3 0.00015 41.2 1.1 41 731-771 72-113 (193)
160 2g80_A Protein UTR4; YEL038W, 42.5 15 0.0005 39.3 3.6 35 731-769 124-158 (253)
161 1q92_A 5(3)-deoxyribonucleotid 42.4 8.4 0.00029 39.2 1.6 42 731-772 74-116 (197)
162 1xpj_A Hypothetical protein; s 37.8 16 0.00056 34.3 2.7 30 732-761 24-53 (126)
163 3kc2_A Uncharacterized protein 37.0 29 0.00098 39.1 5.0 48 725-772 22-73 (352)
164 2jmz_A Hypothetical protein MJ 35.4 30 0.001 35.0 4.4 36 176-211 102-137 (186)
165 2lcj_A PAB POLC intein; hydrol 31.7 50 0.0017 33.3 5.4 36 176-211 92-127 (185)
166 1ccw_A Protein (glutamate muta 30.1 46 0.0016 31.7 4.5 80 668-771 26-113 (137)
167 2l82_A Designed protein OR32; 26.1 2.9E+02 0.01 24.7 8.4 74 663-758 16-89 (162)
168 2jc9_A Cytosolic purine 5'-nuc 25.7 1.2E+02 0.004 36.0 7.6 36 735-771 249-285 (555)
169 1d1n_A Initiation factor 2; be 25.6 38 0.0013 30.5 2.7 21 191-211 78-98 (99)
170 3n28_A Phosphoserine phosphata 24.0 41 0.0014 37.2 3.4 47 727-773 38-95 (335)
171 3noy_A 4-hydroxy-3-methylbut-2 23.7 5.4E+02 0.019 28.6 11.9 154 657-902 160-326 (366)
172 2q5c_A NTRC family transcripti 23.2 5.7E+02 0.02 25.6 11.9 102 661-799 82-183 (196)
173 2crv_A IF-2MT, translation ini 23.2 79 0.0027 29.5 4.4 23 191-213 85-108 (120)
174 4a5o_A Bifunctional protein fo 22.6 99 0.0034 33.5 5.8 69 728-799 12-91 (286)
175 1nz9_A Transcription antitermi 20.8 1E+02 0.0035 24.5 4.2 42 194-235 4-45 (58)
No 1
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=6.9e-106 Score=1048.57 Aligned_cols=889 Identities=19% Similarity=0.201 Sum_probs=655.2
Q ss_pred CcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccccc-----CccchhhhHHHHHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF-----GRGVSILPLAFVLSVTAIKD 160 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~-----~~~~~~~~l~~vi~vs~~~~ 160 (1184)
...|+++||+|.++++|+..+. +.+++||++++++++++++++++++.+.+. ..|...+.++++++++++..
T Consensus 30 ~~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 106 (995)
T 3ar4_A 30 VKRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHH
Confidence 3447889999999998764332 899999999999999999999988654332 23444555666777788888
Q ss_pred HHHHHHHhhchH---hhhcceEEEEECCe--EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCC
Q 001027 161 AYEDYRRHRSDR---IENNRLANVLVNNQ--FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGE 235 (1184)
Q Consensus 161 ~~ed~~r~k~d~---~~n~~~~~V~r~g~--~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGE 235 (1184)
.++++|..++.+ ++.+.+++|+|||+ .++|+|++|+|||||.|++||.||||++|++.+. +.|+||||+||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGE 184 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGE 184 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccCC
Confidence 888888766643 55678999999887 6999999999999999999999999999987543 5699999999999
Q ss_pred CCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccc
Q 001027 236 SNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQET 315 (1184)
Q Consensus 236 s~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dT 315 (1184)
|+|+.|.+.+.. +| ...+.+.+|++++||.+.+ |+++|+|++||++|
T Consensus 185 S~pv~K~~~~~~-----------------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~~T 231 (995)
T 3ar4_A 185 SVSVIKHTEPVP-----------------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGVST 231 (995)
T ss_dssp CSCEEECCSCCC-----------------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGGGS
T ss_pred CcceeccccccC-----------------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEcCcch
Confidence 999999886432 01 1224567899999999998 89999999999999
Q ss_pred ee---eecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccC
Q 001027 316 KV---MLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYG 392 (1184)
Q Consensus 316 ki---~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 392 (1184)
++ ++....++.+++++++.+|++..+++.+++++|++.++++..+...... ...|
T Consensus 232 ~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------- 289 (995)
T 3ar4_A 232 EIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH---GGSW------------------- 289 (995)
T ss_dssp HHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSS---SSCH-------------------
T ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cchH-------------------
Confidence 55 5556677888999999999999999888888877766554321110000 0011
Q ss_pred cchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcc
Q 001027 393 WGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLT 472 (1184)
Q Consensus 393 ~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT 472 (1184)
.......|..++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++|+||||||||||
T Consensus 290 -~~~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT 358 (995)
T 3ar4_A 290 -IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLT 358 (995)
T ss_dssp -HHHHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTB
T ss_pred -HHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcc
Confidence 12234457788999999999999999999999888777 6789999999999999999999999999999
Q ss_pred cceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhccc
Q 001027 473 ENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTI 552 (1184)
Q Consensus 473 ~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~ 552 (1184)
+|+|+|.++++.+..++... +... .. ..+....|.. +... .+........+.+.+++.++++||++
T Consensus 359 ~n~m~v~~~~~~~~~~~~~~-~~~~-~~-----~~~~~~~p~~------~~~~-~~~~~~~~~~~~~~~l~~~~alc~~~ 424 (995)
T 3ar4_A 359 TNQMSVCKMFIIDKVDGDFC-SLNE-FS-----ITGSTYAPEG------EVLK-NDKPIRSGQFDGLVELATICALCNDS 424 (995)
T ss_dssp CCCCEEEEEEEEEEEETTEE-EEEE-EE-----ECCSSSSSCC------CEEE-TTEECCGGGCHHHHHHHHHHHHSCCC
T ss_pred cCceEEEEEEecCcccCccc-ccce-ee-----ccCCCcCCcc------cccc-ccccccccccHHHHHHHHHHHHcCCC
Confidence 99999999998765443100 0000 00 0000000000 0000 00001122345577889999999998
Q ss_pred ccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEE------cCceeeEEEeeeecCCCCCceEEE
Q 001027 553 VPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDI------QGQRQRFNVLGLHEFDSDRKRMSV 626 (1184)
Q Consensus 553 ~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~------~~~~~~~~il~~~~F~s~rkrmSv 626 (1184)
.. +.++..+. ....++|+|.|++.+|++.|+ +..... .+.... ......|++++.+||+|+||||||
T Consensus 425 ~~----~~~~~~~~-~~~~g~p~E~Al~~~a~~~g~-~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msv 497 (995)
T 3ar4_A 425 SL----DFNETKGV-YEKVGEATETALTTLVEKMNV-FNTEVR-NLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSV 497 (995)
T ss_dssp EE----EEETTTTE-EEEESCHHHHHHHHHHHHHCT-TCCCCT-TSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEE
T ss_pred cc----cccCCCCc-eeecCCccHHHHHHHHHHcCC-cccccc-ccccccccccchhhhhhhCceEEEeecCCCCCeeEE
Confidence 75 32222221 123479999999999999887 221100 000000 002357999999999999999999
Q ss_pred EEecCCC-----eEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHH--hhccCeEEEEEEEecCHHHHHH
Q 001027 627 ILGLPDK-----TVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAY--SSLGLRTLVVGMRELSASEFEQ 691 (1184)
Q Consensus 627 iv~~~~~-----~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~--a~~GlRtL~~A~r~l~~~e~~~ 691 (1184)
+++.++| +..+|+||||+.|+++|.... +++.++.+.+++++| +.+|+|||++|||+++..+.
T Consensus 498 i~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~-- 575 (995)
T 3ar4_A 498 YCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE-- 575 (995)
T ss_dssp EEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG--
T ss_pred EEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc--
Confidence 9998776 689999999999999996431 234567788999999 99999999999999864210
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 692 WQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 692 ~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
...+.+ ....+.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||
T Consensus 576 --------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi 642 (995)
T 3ar4_A 576 --------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 642 (995)
T ss_dssp --------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTS
T ss_pred --------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCc
Confidence 001111 1234678999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhcc
Q 001027 772 LTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGT 851 (1184)
Q Consensus 772 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~ 851 (1184)
...+..+ ...+++|+.+..+.++++.+ +...
T Consensus 643 ~~~~~~i---------------------------------------------~~~~~~g~~~~~l~~~~~~~----~~~~ 673 (995)
T 3ar4_A 643 FGENEEV---------------------------------------------ADRAYTGREFDDLPLAEQRE----ACRR 673 (995)
T ss_dssp SCTTCCC---------------------------------------------TTTEEEHHHHHTSCHHHHHH----HHHH
T ss_pred CCCCCcc---------------------------------------------cceEEEchhhhhCCHHHHHH----HHhh
Confidence 7643210 00256777776554443333 3333
Q ss_pred CCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHH
Q 001027 852 CSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLL 928 (1184)
Q Consensus 852 ~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lL 928 (1184)
..+|||++|+||+.+|+.+|+ .|+.|+|+|||+||++||++|||||+| +|.+. |+++||+++.+ |..+.++
T Consensus 674 --~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~i~~~- 747 (995)
T 3ar4_A 674 --ACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFSTIVAA- 747 (995)
T ss_dssp --CCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHHHHHH-
T ss_pred --CcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHHHHHH-
Confidence 449999999999999999999 699999999999999999999999999 45554 89999999976 5557777
Q ss_pred HHHhHhHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCC
Q 001027 929 LVHGHWNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNP 1008 (1184)
Q Consensus 929 l~hGr~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P 1008 (1184)
+.|||++|+|+++++.|.+++|+...++.+++.++.. ..++.+++++|+|++++.+|++++++++.| ++.+.+.|
T Consensus 748 i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl~~~qil~~nl~~d~~p~l~l~~~~~~--~~~m~~~P 822 (995)
T 3ar4_A 748 VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEALIPVQLLWVNLVTDGLPATALGFNPPD--LDIMDRPP 822 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSSCHHHHHHHHHTTTHHHHHHHTTCCCC--TTGGGSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cchHHHHHHHHHHHHHHHHHHHhhccCCCC--hhHHhCCC
Confidence 8999999999999999999999999988888877642 357899999999999999999999986543 44555556
Q ss_pred cccccccCCCccchhhHHHHhHhHHHHHhhhheee---cccccCC-------------------cc-----c---chhhh
Q 001027 1009 QLYGAGHRQECYNTKLFWLTMADTLWQSVVIFFIP---FGAYWDS-------------------TI-----D---VSSIG 1058 (1184)
Q Consensus 1009 ~lY~~~~~~~~~~~~~~~~~~~~~~~~s~vif~~~---~~~~~g~-------------------~~-----~---~~~~~ 1058 (1184)
+ .+++.+++++.++.|++.|+++++++++.+ +....+. .. + .....
T Consensus 823 ~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (995)
T 3ar4_A 823 R----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPM 898 (995)
T ss_dssp C----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHH
T ss_pred C----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhh
Confidence 5 456789999999999999999987764321 1111110 00 0 11234
Q ss_pred HHHHHHHHHHHHHHHHHHhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHH
Q 001027 1059 DLWTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIIL 1131 (1184)
Q Consensus 1059 ~~~~~~~v~~~n~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~ 1131 (1184)
++.|+++++...+..+ .+++ | ..+.+..++.++++.+++.+++.++|.++. +|.....++.+|+.++++.
T Consensus 899 t~~f~~lv~~~~~~~~-~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~ 975 (995)
T 3ar4_A 899 TMALSVLVTIEMCNAL-NSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLPM--IFKLKALDLTQWLMVLKIS 975 (995)
T ss_dssp HHHHHHHHHHHHHHHH-TTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTHHHH--HTTCCCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH-HhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCCCCHHHHHHHHHHH
Confidence 5666666666555543 3221 1 123344455555554444444444553322 3444566888999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 001027 1132 VAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1132 ~~~~~~~~~~k~~~~~~ 1148 (1184)
++.++++.+.|+++|.|
T Consensus 976 ~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 976 LPVIGLDEILKFIARNY 992 (995)
T ss_dssp THHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999988765
No 2
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=1.1e-104 Score=1038.12 Aligned_cols=877 Identities=18% Similarity=0.174 Sum_probs=674.0
Q ss_pred CcCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCc--------ccccCccchhhhHHHHHHH
Q 001027 84 PVKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQ--------LAVFGRGVSILPLAFVLSV 155 (1184)
Q Consensus 84 ~~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~--------~~~~~~~~~~~~l~~vi~v 155 (1184)
.+...|+++||+|.+...|.+.+. +.+++||.++++++++++++++++.. ....+.+...+++++++++
T Consensus 76 ~ea~~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i 152 (1034)
T 3ixz_A 76 SLAAELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVV 152 (1034)
T ss_pred HHHHHHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeH
Confidence 344458899999999988775442 88999999999999999888886531 1112346677888899999
Q ss_pred HHHHHHHHHHHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccC
Q 001027 156 TAIKDAYEDYRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINL 232 (1184)
Q Consensus 156 s~~~~~~ed~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~L 232 (1184)
+++..+++++|++++.+.++ +.+++|+|||++++|+|++|+|||||.|++||.||||++||++++ +.||||+|
T Consensus 153 ~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~L 228 (1034)
T 3ixz_A 153 TGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSL 228 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEeccc
Confidence 99999999999999866554 578999999999999999999999999999999999999999765 88999999
Q ss_pred CCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEec
Q 001027 233 DGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAG 312 (1184)
Q Consensus 233 tGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG 312 (1184)
||||+|+.|.+.+.. ..|++..|++++||.+.+ |.++|+|++||
T Consensus 229 TGES~pv~K~~~~~~-----------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG 272 (1034)
T 3ixz_A 229 TGESEPQTRSPECTH-----------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNTG 272 (1034)
T ss_pred CCCCCCeeccCCCcc-----------------------------------ccccccccceecceeEEe-ecceEEEEeeh
Confidence 999999999876432 124456677788877776 66999999999
Q ss_pred ccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCcc
Q 001027 313 QET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYK 389 (1184)
Q Consensus 313 ~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 389 (1184)
.+| |+..+...++.+++++++.++++..++..+.++++++.++++.++.
T Consensus 273 ~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------------------------- 324 (1034)
T 3ixz_A 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG---------------------------- 324 (1034)
T ss_pred hhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------------
Confidence 999 5566667778889999999999999998888888777766554321
Q ss_pred ccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCC
Q 001027 390 YYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTG 469 (1184)
Q Consensus 390 ~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTG 469 (1184)
..+...+..++.+++.+||++|+++++++..+++.++ ++++++||+++.+|+||++++|||||||
T Consensus 325 -----~~~~~~~~~~i~l~v~~iPe~Lp~~vti~la~~~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTG 389 (1034)
T 3ixz_A 325 -----YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTG 389 (1034)
T ss_pred -----chHHHHHHHHHHHHHheeccccHHHHHHHHHHHHHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCC
Confidence 0134478888999999999999999999999999887 7899999999999999999999999999
Q ss_pred CcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHh
Q 001027 470 TLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAAC 549 (1184)
Q Consensus 470 TLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~C 549 (1184)
|||+|+|+|.++++++..|.....+.+ . .....+.......++.++++|
T Consensus 390 TLT~n~m~v~~~~~~~~~~~~~~~~~~-----------------------~--------~~~~~~~~~~~~~l~~~~~lc 438 (1034)
T 3ixz_A 390 TLTQNRMTVSHLWFDNHIHSADTTEDQ-----------------------S--------GQTFDQSSETWRALCRVLTLC 438 (1034)
T ss_pred CcccCeEEEEEEEECCccccccCcccc-----------------------c--------ccccCcCCHHHHHHHHHHHHh
Confidence 999999999999998876653221100 0 000012234566788999999
Q ss_pred cccccCcccCCCCC--CcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEE
Q 001027 550 NTIVPLVVDTSDPN--VKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVI 627 (1184)
Q Consensus 550 ht~~~~~~~~~~~~--~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSvi 627 (1184)
|++.. +.+.+ .....+..++|.|.|+++++...|.... +....|+.++.+||+|+||||+++
T Consensus 439 ~~a~~----~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~------------~~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 439 NRAAF----KSGQDAVPVPKRIVIGDASETALLKFSELTLGNAM------------GYRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred cccee----ccCcCCCcccCceeccCchHHHHHHHHHHhCCChH------------HHHHhCcceEEeeecCCCceEEEE
Confidence 99876 21111 1112234579999999999988764321 124678899999999999999998
Q ss_pred EecCC---CeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHH
Q 001027 628 LGLPD---KTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 696 (1184)
Q Consensus 628 v~~~~---~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 696 (1184)
++.++ +++.+|+||||+.|+++|+... +++.++.+.+++++|+.+|+|||++|+|.++++++.++....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc
Confidence 87643 7899999999999999997531 345677889999999999999999999999987765543211
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 697 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 697 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
+ +..+.+|+||+|+|+++++|++|++++++|++|+++||+|||+|||+..||.+||++|||..++.
T Consensus 583 ---------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~ 648 (1034)
T 3ixz_A 583 ---------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGS 648 (1034)
T ss_pred ---------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCc
Confidence 0 11245689999999999999999999999999999999999999999999999999999986542
Q ss_pred eEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE
Q 001027 777 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 856 (1184)
Q Consensus 777 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi 856 (1184)
.. ..+..+ .... .. ... ........+++|..+....+++ +.++...++.++
T Consensus 649 ~~----------i~~~~~----~~~~-~~----~~~------~~~~~~~~~~~g~~l~~~~~~~----l~~~~~~~~~~v 699 (1034)
T 3ixz_A 649 ET----------VEDIAA----RLRV-PV----DQV------NRKDARACVINGMQLKDMDPSE----LVEALRTHPEMV 699 (1034)
T ss_pred hH----------HHHHHH----hhCc-cc----hhc------cccccceeEEecHhhhhCCHHH----HHHHHHhCCceE
Confidence 11 000000 0000 00 000 0123446789999887665443 445556677789
Q ss_pred EEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhh--HHHHHHHHhHh
Q 001027 857 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHW 934 (1184)
Q Consensus 857 ~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~ 934 (1184)
|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||.++...+|+++||+++.++++ +..+ +.|||+
T Consensus 700 ~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~a-i~~GR~ 777 (1034)
T 3ixz_A 700 FARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTG-VEQGRL 777 (1034)
T ss_pred EEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHH-HHHHHH
Confidence 999999999999999999 899999999999999999999999999534444499999999998777 4444 789999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccc
Q 001027 935 NYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAG 1014 (1184)
Q Consensus 935 ~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~ 1014 (1184)
+|+|+++++.|.+++|+..+++.+++.++. ...++.+++++|.|++++.+|+++++.. ++++.+|+.|+ ..
T Consensus 778 i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e---~~~~~~m~~~P---r~ 848 (1034)
T 3ixz_A 778 IFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYE---KAESDIMHLRP---RN 848 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCChhhhhCCC---CC
Confidence 999999999999999999999999988875 4568999999999999999999999873 34555665544 13
Q ss_pred c-CCCccchhhHHHH-hHhHHHHHhhhheeeccc--ccCC----------------ccc-----------------chhh
Q 001027 1015 H-RQECYNTKLFWLT-MADTLWQSVVIFFIPFGA--YWDS----------------TID-----------------VSSI 1057 (1184)
Q Consensus 1015 ~-~~~~~~~~~~~~~-~~~~~~~s~vif~~~~~~--~~g~----------------~~~-----------------~~~~ 1057 (1184)
+ +..+++.+.++.. +..|++++++.|+.+++. ..|. ..+ ....
T Consensus 849 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 928 (1034)
T 3ixz_A 849 PKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTC 928 (1034)
T ss_pred CccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhhhhhhhhH
Confidence 3 4678888777654 345777766555442211 0110 000 0013
Q ss_pred hHHHHHHHHHHHHHHHHHHhcc-----c--hhHhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHH
Q 001027 1058 GDLWTLAVVILVNIHLAMDVIR-----W--TWITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMII 1130 (1184)
Q Consensus 1058 ~~~~~~~~v~~~n~~~~l~~~~-----~--~~~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~ 1130 (1184)
.++.|+++++...+..+ .+++ | .++.+.++|+++++.+++++++.++|.++. +|.....++..|+.++++
T Consensus 929 ~t~~f~~lv~~q~~~~~-~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~ 1005 (1034)
T 3ixz_A 929 YTVFFISIEMCQIADVL-IRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMPN--IFNFMPIRFQWWLVPMPF 1005 (1034)
T ss_pred HHHHHHHHHHHHHHHHH-hhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHHH--HhcCCCCCHHHHHHHHHH
Confidence 45566666655444433 3332 2 235677888888888888888877775554 355566788999999999
Q ss_pred HHHHHHHHHHHHHHHHhhCC
Q 001027 1131 LVAALIPRFLVKFLYQYYYP 1150 (1184)
Q Consensus 1131 ~~~~~~~~~~~k~~~~~~~p 1150 (1184)
.++.++.+++.|++.|++-+
T Consensus 1006 ~~~~~~~~e~~K~~~r~~~~ 1025 (1034)
T 3ixz_A 1006 GLLIFVYDEIRKLGVRCCPG 1025 (1034)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999887744
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=3.9e-105 Score=1040.57 Aligned_cols=872 Identities=18% Similarity=0.195 Sum_probs=665.5
Q ss_pred CcccccCCCCCeeecCC-ccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcc-c-------ccCccchhhhHHHHHHHH
Q 001027 86 KSNEKFEFAGNSIRTGK-YSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQL-A-------VFGRGVSILPLAFVLSVT 156 (1184)
Q Consensus 86 ~~~~~~~~g~N~i~t~k-yt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~-~-------~~~~~~~~~~l~~vi~vs 156 (1184)
...|+++||+|.++..| .++| +.+++||.++++++++++++++++... . ..+.+...++++++++++
T Consensus 73 ~~~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~ 148 (1028)
T 2zxe_A 73 AKEILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVT 148 (1028)
T ss_dssp HHHHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHH
Confidence 34478899999999875 4555 889999999999999999999876411 1 012355677888999999
Q ss_pred HHHHHHHHHHHhhchHh---hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCC
Q 001027 157 AIKDAYEDYRRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLD 233 (1184)
Q Consensus 157 ~~~~~~ed~~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~Lt 233 (1184)
++.++++++|.+++.+. +.+.+++|+|||++++|+|++|+|||||.|++||.||||++|+++++ |+||||+||
T Consensus 149 ~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LT 224 (1028)
T 2zxe_A 149 GCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLT 224 (1028)
T ss_dssp HHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccC
Confidence 99999999988887654 45789999999999999999999999999999999999999999654 999999999
Q ss_pred CCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecc
Q 001027 234 GESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQ 313 (1184)
Q Consensus 234 GEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~ 313 (1184)
|||+|+.|.+++.. ..|++.+|++++||.+.+ |+++|+|++||.
T Consensus 225 GES~pv~K~~~~~~-----------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~ 268 (1028)
T 2zxe_A 225 GESEPQTRSPEFSS-----------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGD 268 (1028)
T ss_dssp SCCSCEECCSSCCC-----------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGG
T ss_pred CCCcceecccCCCC-----------------------------------CCcccccceEEeCceEEc-ceEEEEEEEecc
Confidence 99999999876432 115678899999999997 899999999999
Q ss_pred cce---eeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccc
Q 001027 314 ETK---VMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKY 390 (1184)
Q Consensus 314 dTk---i~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 390 (1184)
+|+ ++++...++.+++++++.+++++.+++.+.+++|++.+++..+.. ..|
T Consensus 269 ~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~~---------~~~----------------- 322 (1028)
T 2zxe_A 269 RTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG---------YSW----------------- 322 (1028)
T ss_dssp GSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CCH-----------------
T ss_pred ccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------CcH-----------------
Confidence 994 466667778899999999999999999988888888776643211 012
Q ss_pred cCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCC
Q 001027 391 YGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGT 470 (1184)
Q Consensus 391 ~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGT 470 (1184)
...+..++.+++.+|||+|+++++++..+++.++ ++++++||+++.+|+||++++||||||||
T Consensus 323 -------~~~~~~~i~llv~~iP~~Lp~~vti~l~~~~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGT 385 (1028)
T 2zxe_A 323 -------LEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGT 385 (1028)
T ss_dssp -------HHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCC
T ss_pred -------HHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH----------hhCCceeccchHhhhhcCceEEeccCCCC
Confidence 2256667788889999999999999999998887 78999999999999999999999999999
Q ss_pred cccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhc
Q 001027 471 LTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACN 550 (1184)
Q Consensus 471 LT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Ch 550 (1184)
||+|+|+|.++++++..|.....+.+ . + ...+...+..++++.++++||
T Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~----------------~--------------~-~~~~~~~~~~~~l~~~~alc~ 434 (1028)
T 2zxe_A 386 LTQNRMTVAHMWFDNQIHEADTTENQ----------------S--------------G-AAFDKTSATWSALSRIAALCN 434 (1028)
T ss_dssp CBCSSCEEEEEEETTEEEECCCCTTC----------------C--------------S-CCCCSSCHHHHHHHHHHHHSC
T ss_pred CCCCeEEEEEEEECCeeeeccCCCCc----------------c--------------c-cccccCCHHHHHHHHHHHhcC
Confidence 99999999999998876642211100 0 0 000112344567889999999
Q ss_pred ccccCcccCCCCCCc--ceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEE
Q 001027 551 TIVPLVVDTSDPNVK--LVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVIL 628 (1184)
Q Consensus 551 t~~~~~~~~~~~~~~--~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv 628 (1184)
++.. +.+.+.. ...+..++|+|.|++++|++.|... .+....|++++.+||+|+||||++++
T Consensus 435 ~~~~----~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~------------~~~~~~~~~~~~~pF~s~rk~msvi~ 498 (1028)
T 2zxe_A 435 RAVF----QAGQDNVPILKRSVAGDASESALLKCIELCCGSV------------QGMRDRNPKIVEIPFNSTNKYQLSIH 498 (1028)
T ss_dssp CCEE----CTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH------------HHHHHHSCEEEEECCCTTTCEEEEEE
T ss_pred CCee----ecCCCCCccccceeCCCchHHHHHHHHHHhCCCH------------HHHHHhCceEEEeccCcccceEEEEE
Confidence 9876 3221111 1112357999999999998864311 11235688999999999999999999
Q ss_pred ecC---CCeEEEEecChhhHHHHHHHhhh--------chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHH
Q 001027 629 GLP---DKTVTLFVKGADTSMFSVIAKAL--------NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFE 697 (1184)
Q Consensus 629 ~~~---~~~~~l~~KGa~~~i~~~~~~~~--------~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~ 697 (1184)
+.+ ++++++|+||||+.|+++|.... +++.++.+.+++++|+.+|+|||++|+|.++++++.++.+
T Consensus 499 ~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~--- 575 (1028)
T 2zxe_A 499 ENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP--- 575 (1028)
T ss_dssp ECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC---
T ss_pred eccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc---
Confidence 974 57899999999999999996421 2345678889999999999999999999997654332100
Q ss_pred HHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCce
Q 001027 698 AASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT 777 (1184)
Q Consensus 698 ~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~ 777 (1184)
. +++ ..+.+|+|++|+|+++++|++|++++++|++|+++||++||+|||+.+||.+||++|||...+..
T Consensus 576 -----~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~ 644 (1028)
T 2zxe_A 576 -----F-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 644 (1028)
T ss_dssp -----C-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC
T ss_pred -----c-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch
Confidence 0 110 11345899999999999999999999999999999999999999999999999999999865433
Q ss_pred EEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEE
Q 001027 778 QVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC 857 (1184)
Q Consensus 778 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~ 857 (1184)
.+ .+ .... ... .. .... .......+++|..+..+.+++ +.++...++.++|
T Consensus 645 ~i-------~~----~~~~--~~~--~~----~~~~------~~~~~~~vi~G~~l~~~~~~~----l~~~~~~~~~~v~ 695 (1028)
T 2zxe_A 645 TI-------ED----IAAR--LNI--PI----GQVN------PRDAKACVVHGSDLKDLSTEV----LDDILHYHTEIVF 695 (1028)
T ss_dssp CH-------HH----HHHH--TTC--CG----GGSC------GGGCCEEEEEHHHHTTCCHHH----HHHHHHHCSEEEE
T ss_pred hH-------HH----HHhh--cCc--ch----hhcc------ccccceEEEEcHHhhhCCHHH----HHHHHhhCCcEEE
Confidence 21 10 1000 000 00 0000 122346789999998765543 4445567777899
Q ss_pred EecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEec--CcchhHHHhcCcccccc--hhhHHHHHHHHhH
Q 001027 858 CRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGIS--GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 933 (1184)
Q Consensus 858 ~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~is--g~e~~qA~~asD~~i~~--f~~L~~lLl~hGr 933 (1184)
||++|+||..+|+.+|+ .|++|+|+|||+||++||++|||||+|. |++. |+++||+++.+ |..+.++ +.|||
T Consensus 696 ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I~~~-i~~gR 771 (1028)
T 2zxe_A 696 ARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASIVTG-VEEGR 771 (1028)
T ss_dssp ESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHHHHH-HHHHH
T ss_pred EEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHHHHH-HHHHH
Confidence 99999999999999999 7999999999999999999999999994 5665 88999999987 5657777 89999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCccccc
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGA 1013 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~ 1013 (1184)
++|+|+++++.|.+++|+..+++.+++.++. ...++++++++|.|++.+.+|+++++. |+ +.++.+.+.|+ .
T Consensus 772 ~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~---~~~~l~~~qil~inl~~d~~pa~al~~-e~-~~~~~m~~~Pr---~ 843 (1028)
T 2zxe_A 772 LIFDNLKKSIAYTLTSNIPEITPFLVFIIGN---VPLPLGTVTILCIDLGTDMVPAISLAY-EQ-AESDIMKRQPR---N 843 (1028)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHC---CCCSSCHHHHHHHHTTTTHHHHHHGGG-CC-CSSCGGGSCCC---C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ccchhHHHHHHHHHHHHHHHHHHHhcc-Cc-cchhhhccCCC---C
Confidence 9999999999999999999988888887764 345789999999999999999999985 33 23344444454 2
Q ss_pred ccCCCccchhhHHH-HhHhHHHHHhhhheeeccc--ccCC---------------c-c------c-----------chhh
Q 001027 1014 GHRQECYNTKLFWL-TMADTLWQSVVIFFIPFGA--YWDS---------------T-I------D-----------VSSI 1057 (1184)
Q Consensus 1014 ~~~~~~~~~~~~~~-~~~~~~~~s~vif~~~~~~--~~g~---------------~-~------~-----------~~~~ 1057 (1184)
...+.+++++.++. |+..|++++++.|+.+++. ..|. . . + ....
T Consensus 844 ~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (1028)
T 2zxe_A 844 PKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTC 923 (1028)
T ss_dssp TTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccchhhhhhhhhHH
Confidence 23348999998877 5678999998777653221 0111 0 0 0 0134
Q ss_pred hHHHHHHHHHHHHHHHHHH-hccchh----HhHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHH
Q 001027 1058 GDLWTLAVVILVNIHLAMD-VIRWTW----ITHAVIWGSIIATLICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILV 1132 (1184)
Q Consensus 1058 ~~~~~~~~v~~~n~~~~l~-~~~~~~----~~~~~i~~si~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~ 1132 (1184)
.+++|+++++...+..+.. +...++ +.+..+|+++++.+++.++..++|.+.. +|.....++..|+.++.+.+
T Consensus 924 ~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~~--~f~~~~l~~~~w~~~~~~~~ 1001 (1028)
T 2zxe_A 924 HTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTDV--ALRMYPLKPSWWFCAFPYSL 1001 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHHH--HTCCCCCCGGGGGTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHHh--hhcCCCCCHHHHHHHHHHHH
Confidence 5777887777766665432 222222 2345666666666666666666664433 23445567889998888888
Q ss_pred HHHHHHHHHHHHHHhh
Q 001027 1133 AALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1133 ~~~~~~~~~k~~~~~~ 1148 (1184)
..++...+.|++.|++
T Consensus 1002 ~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 1002 IIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcc
Confidence 8889999999887765
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=1.8e-95 Score=925.72 Aligned_cols=771 Identities=17% Similarity=0.191 Sum_probs=573.5
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCcccccCccchhhhHHHHHHHHHHHHHHHH
Q 001027 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGVSILPLAFVLSVTAIKDAYED 164 (1184)
Q Consensus 85 ~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~~l~~vi~vs~~~~~~ed 164 (1184)
+...|+++||+|.++..|+++| +.+++||..+.+++++++++++++ .+.|...+.++++++++++.+++++
T Consensus 92 ea~~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~-----~g~~~~~~~i~~vv~i~~~i~~~qe 162 (920)
T 1mhs_A 92 EVVQRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAG-----LEDWVDFGVICGLLLLNAVVGFVQE 162 (920)
T ss_dssp HHHHHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTT-----CSCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344788999999999998887 778899999999999999999887 4667777777888899999999999
Q ss_pred HHHhhchHhhh---cceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceee
Q 001027 165 YRRHRSDRIEN---NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTR 241 (1184)
Q Consensus 165 ~~r~k~d~~~n---~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K 241 (1184)
++..++.+.++ +.+++|+|||++++|++++|+|||||.|++||.||||++|++++ +.+.||||+|||||.|+.|
T Consensus 163 ~~a~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~---~~l~VDES~LTGES~PV~K 239 (920)
T 1mhs_A 163 FQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDD---AFLQVDQSALTGESLAVDK 239 (920)
T ss_dssp HHHHHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEES---SCCEEBCTTTSSCCCCEEC
T ss_pred HHHHHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecC---ceeeeeccccCCCCcceEe
Confidence 99998876554 57899999999999999999999999999999999999999955 2279999999999999999
Q ss_pred cccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeee--
Q 001027 242 YAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML-- 319 (1184)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~-- 319 (1184)
.+++.. |+||++.+| .+.++|++||.+|++.+
T Consensus 240 ~~gd~v-------------------------~sGT~v~~G---------------------~~~~~V~~tG~~T~~g~I~ 273 (920)
T 1mhs_A 240 HKGDQV-------------------------FASSAVKRG---------------------EAFVVITATGDNTFVGRAA 273 (920)
T ss_dssp CSSCEE-------------------------CSCBCCSCC---------------------CEEEEEEECSTTCSTTTTT
T ss_pred cCCCee-------------------------ecCceEecc---------------------eEEEEEEEeCCcCHHHHHH
Confidence 876554 566555544 49999999999996644
Q ss_pred -cCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcchhHH
Q 001027 320 -NSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGLEIL 398 (1184)
Q Consensus 320 -n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 398 (1184)
....++.+++++++.++++..++++++++++++.++.+.+ .. ..+.
T Consensus 274 ~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~~---~~------------------------------~~~~ 320 (920)
T 1mhs_A 274 ALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSFY---RS------------------------------NPIV 320 (920)
T ss_dssp SSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT---TT------------------------------CCHH
T ss_pred HHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cC------------------------------CcHH
Confidence 4456677899999999999988877766666554332211 00 0123
Q ss_pred HHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccceeEE
Q 001027 399 FTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEF 478 (1184)
Q Consensus 399 ~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~ 478 (1184)
..+..++.+++.+|||+|+++++++..+++.++ +++++++|+++.+|+||++|+||||||||||+|+|++
T Consensus 321 ~~l~~av~llV~aiP~aLp~~vti~la~g~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v 390 (920)
T 1mhs_A 321 QILEFTLAITIIGVPVGLPAVVTTTMAVGAAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSL 390 (920)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCC
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeE
Confidence 467788999999999999999999999988877 6789999999999999999999999999999999999
Q ss_pred EEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccCccc
Q 001027 479 RCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVD 558 (1184)
Q Consensus 479 ~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~ 558 (1184)
.+++..+. + ++ .+++.+.++|+....
T Consensus 391 ~~~~~~~g-~-------------------------------~~------------------~~ll~~a~l~~~~~~---- 416 (920)
T 1mhs_A 391 HDPYTVAG-V-------------------------------DP------------------EDLMLTACLAASRKK---- 416 (920)
T ss_dssp CCCBCCSC-C-------------------------------CC------------------THHHHHHHHSCCCSS----
T ss_pred EEEeecCC-C-------------------------------CH------------------HHHHHHHHHhcCCcc----
Confidence 87643210 0 10 023445566764321
Q ss_pred CCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEE
Q 001027 559 TSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLF 638 (1184)
Q Consensus 559 ~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~ 638 (1184)
.+.||.|.|+++++++.+.. .+....|++++.+||+|.||||+++++.++|+.+++
T Consensus 417 -----------~~~~P~e~Al~~~~~~~~~~-------------~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~ 472 (920)
T 1mhs_A 417 -----------KGIDAIDKAFLKSLKYYPRA-------------KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITC 472 (920)
T ss_dssp -----------CSCCSHHHHHHHHHHHSSSC-------------CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEE
T ss_pred -----------cCCChHHHHHHHHHHhcccc-------------hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEE
Confidence 12499999999999887641 112356889999999999999999999888888999
Q ss_pred ecChhhHHHHHHHhhh--chhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHh
Q 001027 639 VKGADTSMFSVIAKAL--NMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASS 716 (1184)
Q Consensus 639 ~KGa~~~i~~~~~~~~--~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~ 716 (1184)
+||||+.|+++|.... +++.++.+.+++++|+.+|+|||++|+|..
T Consensus 473 ~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------------------------------- 520 (920)
T 1mhs_A 473 VKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------------------------------- 520 (920)
T ss_dssp EEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------------------------------
T ss_pred EeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------------------------------
Confidence 9999999999996421 334567788899999999999999998731
Q ss_pred hccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHH
Q 001027 717 VENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDA 796 (1184)
Q Consensus 717 iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~ 796 (1184)
|++++|+|+++++|++|++++++|+.|+++||+|||+|||+..||.+||++|||..... +...
T Consensus 521 -e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~-----~~~~----------- 583 (920)
T 1mhs_A 521 -EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIY-----NAER----------- 583 (920)
T ss_dssp -SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCC-----CSSS-----------
T ss_pred -ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCcccc-----Cccc-----------
Confidence 56899999999999999999999999999999999999999999999999999964210 0000
Q ss_pred HHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC
Q 001027 797 IAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT 876 (1184)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~ 876 (1184)
++++|. ..+-+++ +.++...+. ||||++|+||+.+|+.+|+ .
T Consensus 584 -----------------------------~~~~g~--~~~~~~e----l~~~~~~~~--V~arv~P~~K~~iV~~Lq~-~ 625 (920)
T 1mhs_A 584 -----------------------------LGLGGG--GDMPGSE----VYDFVEAAD--GFAEVFPQHKYNVVEILQQ-R 625 (920)
T ss_dssp -----------------------------SSSCBC--CCGGGGG----GGTTTTTTS--CEESCCSTHHHHHHHHHHT-T
T ss_pred -----------------------------eeecCc--ccCCHHH----HHHHHhhCe--EEEEeCHHHHHHHHHHHHh-C
Confidence 011221 0001111 122233344 9999999999999999999 7
Q ss_pred CCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhHHHHHHHHHHH
Q 001027 877 SDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRNAVL 953 (1184)
Q Consensus 877 g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i~~~~~kni~~ 953 (1184)
|+.|+|+|||+||+|||++|||||+|. |++. |+++||+++.+ |..+..+ +.|||++|+|+++++.|.++.|+.+
T Consensus 626 g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~l~~n~~~ 702 (920)
T 1mhs_A 626 GYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYRIALSIHL 702 (920)
T ss_dssp TCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999994 4444 88999999976 4447777 8999999999999999999999987
Q ss_pred HHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHhHH
Q 001027 954 VFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMADTL 1033 (1184)
Q Consensus 954 ~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~~~ 1033 (1184)
....+++..+.+++ +++.+++|.|++.+. |++++++.+.+.+ +.|+-... .+.++..++.|+
T Consensus 703 ~~~~~~~~~~~~~~----l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~~~~--------~~~~~~~~~~g~ 764 (920)
T 1mhs_A 703 EIFLGLWIAILNRS----LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVKWNL--------PKLWGMSVLLGV 764 (920)
T ss_dssp HHHHHHHHHSCSCC----CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCCCCS--------SSCSSCHHHHHH
T ss_pred HHHHHHHHHHHhcc----CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCCchH--------HHHHHHHHHHHH
Confidence 54444333333433 566777788877775 9999987554321 34542211 112222334455
Q ss_pred HHHhhhheeec--cc--c-cCCcccchhhhHHHHHHHHHHHHHHHHHHhcc----chhHhHHHHHHHHHHHHHHHHHHhc
Q 001027 1034 WQSVVIFFIPF--GA--Y-WDSTIDVSSIGDLWTLAVVILVNIHLAMDVIR----WTWITHAVIWGSIIATLICVMIIDA 1104 (1184)
Q Consensus 1034 ~~s~vif~~~~--~~--~-~g~~~~~~~~~~~~~~~~v~~~n~~~~l~~~~----~~~~~~~~i~~si~~~~~~~~~~~~ 1104 (1184)
+.++..++.+. +. . .+.........+++|+++++...+.++. +++ |....+..+++++++..++...+.+
T Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~-~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 843 (920)
T 1mhs_A 765 VLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFI-TRANGPFWSSIPSWQLSGAIFLVDILATCFTI 843 (920)
T ss_dssp HHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTS-SSCSSSCSCCSCTHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHH-hccchhhhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 55554332211 11 1 1111122246788899888887776652 222 2112334455555544444444444
Q ss_pred cCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001027 1105 VPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYYY 1149 (1184)
Q Consensus 1105 ~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~~ 1149 (1184)
++.+. ....++..|+.++++.++.++...+.|.+.++..
T Consensus 844 ~~~f~------~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~~ 882 (920)
T 1mhs_A 844 WGWFE------HSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSV 882 (920)
T ss_dssp SSSTT------SCSHHHHTHHHHHHHTTHHHHHHHHHHHCCCCCC
T ss_pred hhhhc------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 44222 2334567788888777777777778786555443
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=1.9e-94 Score=917.76 Aligned_cols=779 Identities=16% Similarity=0.153 Sum_probs=554.3
Q ss_pred cCcccccCCCCCeeecCCccchhhhHHHHHHHhhHHHHHHHHHHHHHhhcCccc--ccCccchhhhHHHHHHHHHHHHHH
Q 001027 85 VKSNEKFEFAGNSIRTGKYSILTFIPRNLFEQFHRVAYIYFLVIAVLNQLPQLA--VFGRGVSILPLAFVLSVTAIKDAY 162 (1184)
Q Consensus 85 ~~~~~~~~~g~N~i~t~kyt~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~--~~~~~~~~~~l~~vi~vs~~~~~~ 162 (1184)
+...|+++||+|.++..+++.| +.+++||..+++++++++++++++.... ....|...+.++++++++.+.+++
T Consensus 37 e~~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~ 112 (885)
T 3b8c_A 37 EGEDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFI 112 (885)
T ss_dssp HHHHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTT
T ss_pred HHHHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3445889999999999998777 5677899999998999999998874210 112455666677777888888889
Q ss_pred HHHHHhhchHh---hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCce
Q 001027 163 EDYRRHRSDRI---ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLK 239 (1184)
Q Consensus 163 ed~~r~k~d~~---~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k 239 (1184)
+++|..++.+. +.+.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ ++||||+|||||.|+
T Consensus 113 qe~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv 188 (885)
T 3b8c_A 113 EENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPV 188 (885)
T ss_dssp TTTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCC
T ss_pred HHHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcce
Confidence 99888777554 45778999999999999999999999999999999999999999653 689999999999999
Q ss_pred eecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEecccceeee
Q 001027 240 TRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKVML 319 (1184)
Q Consensus 240 ~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki~~ 319 (1184)
.|.+++.. |+||.+.+| +++++|++||.+|++.+
T Consensus 189 ~K~~g~~v-------------------------~~GT~v~~G---------------------~~~~~V~~tG~~T~~g~ 222 (885)
T 3b8c_A 189 TKHPGQEV-------------------------FSGSTCKQG---------------------EIEAVVIATGVHTFFGK 222 (885)
T ss_dssp CBSSCCCC-------------------------CSCCCCCSC---------------------CCCCBCCSCTTTTTSTT
T ss_pred EecCCCcc-------------------------ccCeEEeee---------------------EEEEEEEEcCcccHHHH
Confidence 99876554 555555544 49999999999996533
Q ss_pred ---cCCCCCCccCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcccCCcccccccccccCCCCCCCCCCccccCcch
Q 001027 320 ---NSSGAPSKRSWLEMHMNSEIIKLSF-FLVALCTVVSICAAVWLKRHNDELDYMPYYRRKDFSEEGEPDNYKYYGWGL 395 (1184)
Q Consensus 320 ---n~~~~~~k~s~le~~~~~~~~~l~~-~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 395 (1184)
.... ..+++++++.++++..+++. +++.++++.++.+.+ .. ..|
T Consensus 223 i~~lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~------~~~---------------------- 270 (885)
T 3b8c_A 223 AAHLVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI---QR------RKY---------------------- 270 (885)
T ss_dssp CCCSCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT---TC------SCS----------------------
T ss_pred HHHHHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---cc------CcH----------------------
Confidence 3333 56789999999999876433 222222222111111 00 011
Q ss_pred hHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccccceeEEEEcCCCCcccce
Q 001027 396 EILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLGQIKYVFSDKTGTLTENK 475 (1184)
Q Consensus 396 ~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~ 475 (1184)
...+.+++.+++.+|||+||++++++..+++.++ +++++++|+++.+|+||++|+||||||||||+|+
T Consensus 271 --~~~~~~~v~llv~aiP~aLp~~vti~la~g~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~ 338 (885)
T 3b8c_A 271 --RDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNK 338 (885)
T ss_dssp --TTHHHHHHHHTTTTCCSSTTTHHHHTTTHHHHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCC
T ss_pred --HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCc
Confidence 1157788999999999999999999888888776 7899999999999999999999999999999999
Q ss_pred eEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchHHHHHHHHHHHhcccccC
Q 001027 476 MEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPL 555 (1184)
Q Consensus 476 m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~ 555 (1184)
|+|.++.+. .++.+ ....+++...++|+...
T Consensus 339 m~v~~~~~~--~~~~~---------------------------------------------~~~~~ll~~aa~~~~~~-- 369 (885)
T 3b8c_A 339 LSVDKNLVE--VFCKG---------------------------------------------VEKDQVLLFAAMASRVE-- 369 (885)
T ss_dssp CCCCSCCCC--SSCSS---------------------------------------------TTHHHHHHHHHHHCCSS--
T ss_pred eEEEEEEEe--ccCCC---------------------------------------------CCHHHHHHHHHHHhCCC--
Confidence 998532210 01000 00124566677887532
Q ss_pred cccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeE
Q 001027 556 VVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTV 635 (1184)
Q Consensus 556 ~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~ 635 (1184)
++||.|.|+++++.+.. .....|++++.+||+|.||||+++++..+|+.
T Consensus 370 ---------------~~~p~~~Al~~~~~~~~----------------~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~ 418 (885)
T 3b8c_A 370 ---------------NQDAIDAAMVGMLADPK----------------EARAGIREVHFLPFNPVDKRTALTYIDGSGNW 418 (885)
T ss_dssp ---------------SCCSHHHHHHHTTCCTT----------------CCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCB
T ss_pred ---------------CCCchHHHHHHHhhchh----------------hHhhcCceeecccCCcccceEEEEEEecCCcE
Confidence 26999999999774310 12346788899999999999999999878888
Q ss_pred EEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 001027 636 TLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVAS 715 (1184)
Q Consensus 636 ~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~ 715 (1184)
++++||||+.|+++|... ++.++.+.+++++|+.+|+|++++|+|++++++ .+
T Consensus 419 ~~~~KGa~e~il~~c~~~--~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~-------------------------~~ 471 (885)
T 3b8c_A 419 HRVSKGAPEQILELAKAS--NDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT-------------------------KE 471 (885)
T ss_dssp CBCCCCSGGGTSSSSCCC--STTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS-------------------------SS
T ss_pred EEEEeCCHHHHHHhccCc--hhhHHHHHHHHHHHHhCCCeEEEEEEecccccc-------------------------cc
Confidence 899999999999998642 345667888999999999999999999886532 13
Q ss_pred hhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHH
Q 001027 716 SVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLED 795 (1184)
Q Consensus 716 ~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~ 795 (1184)
..|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.+||+++||..+... .
T Consensus 472 ~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~-----~------------ 534 (885)
T 3b8c_A 472 SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYP-----S------------ 534 (885)
T ss_dssp CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCST-----T------------
T ss_pred ccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCC-----c------------
Confidence 56889999999999999999999999999999999999999999999999999999642100 0
Q ss_pred HHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcch-HHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHh
Q 001027 796 AIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDS-ELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKT 874 (1184)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~-~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~ 874 (1184)
-++.|..++..+++ ++ .++...++ ||||++|+||..+|+.+|+
T Consensus 535 ------------------------------~~l~g~~~~~~~~~~~l----~~~~~~~~--v~arv~P~~K~~iV~~lq~ 578 (885)
T 3b8c_A 535 ------------------------------SALLGTHKDANLASIPV----EELIEKAD--GFAGVFPEHKYEIVKKLQE 578 (885)
T ss_dssp ------------------------------SSCCBGGGGTTSCCSCH----HHHHHTSC--CEECCCHHHHHHHHHHHHH
T ss_pred ------------------------------ceeeccccccccchhHH----HHHHhhCc--EEEEECHHHHHHHHHHHHH
Confidence 01223333221111 12 22333444 9999999999999999999
Q ss_pred cCCCeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccchhh--HHHHHHHHhHhHHHHHHHhHHHHHHHHH
Q 001027 875 RTSDMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFRF--LVTLLLVHGHWNYQRMGYMILYNFYRNA 951 (1184)
Q Consensus 875 ~~g~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~~--L~~lLl~hGr~~~~ri~~~i~~~~~kni 951 (1184)
.|+.|+|+|||+||+|||++|||||+|. |.+. |+++||+++.+.++ +..+ +.+||++|+|+++++.|.+..|+
T Consensus 579 -~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i~~~l~~n~ 654 (885)
T 3b8c_A 579 -RKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYTIYAVSITI 654 (885)
T ss_dssp -TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999994 4443 88999999988555 6666 89999999999999999999998
Q ss_pred HHHHHHHHHHHhhcccchhhhhHHHHHHHHHHhhhHHHHHHhhhcccCChHHHhcCCcccccccCCCccchhhHHHHhHh
Q 001027 952 VLVFVLFWYVLFTAFTLTTAINEWSSVLYSVIYTSLPTIVVAILDKDLSRRTLLQNPQLYGAGHRQECYNTKLFWLTMAD 1031 (1184)
Q Consensus 952 ~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~i~t~lp~i~l~~~d~d~~~~~~~~~P~lY~~~~~~~~~~~~~~~~~~~~ 1031 (1184)
...+..++..+ ++ ..++++++++|.|++.+..+ ++++....+ .|+ .++...+ .+.++.+++.
T Consensus 655 ~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~~~--------~~~----~p~~~~~-~~~~~~~~~~ 716 (885)
T 3b8c_A 655 RIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDRVK--------PSP----TPDSWKL-KEIFATGVVL 716 (885)
T ss_dssp TTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCCCC--------CSS----CCCSTTT-TTTTTTHHHH
T ss_pred HHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-HhhcccccC--------ccc----CCcchhH-HHHHHHHHHH
Confidence 65554444433 22 23678999999999998765 566542111 111 1122222 4445666778
Q ss_pred HHHHHhhhheeeccccc-C---Cccc-------chhhhHHHHHHHHHHHHHHHHHHhccch--hHhHH---HHHHHHHHH
Q 001027 1032 TLWQSVVIFFIPFGAYW-D---STID-------VSSIGDLWTLAVVILVNIHLAMDVIRWT--WITHA---VIWGSIIAT 1095 (1184)
Q Consensus 1032 ~~~~s~vif~~~~~~~~-g---~~~~-------~~~~~~~~~~~~v~~~n~~~~l~~~~~~--~~~~~---~i~~si~~~ 1095 (1184)
|++.+++.++++++... | ...+ .....+++|+..+++..+ .++.+++.. |+.+. .++..++..
T Consensus 717 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~~~~~~~~~~~~~~~~~~~~~ 795 (885)
T 3b8c_A 717 GGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSRSWSFVERPGALLMIAFLIAQ 795 (885)
T ss_dssp HSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSCTTTSTTSTTTTTSGGGSSTT
T ss_pred HHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccCCCCcccCccHHHHHHHHHHH
Confidence 88888877766433221 1 0001 112234444433333333 234444432 22211 111111111
Q ss_pred HHHHHHHhccCCCchHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001027 1096 LICVMIIDAVPSLPGYWAFFEVAKTRLFWFCLMIILVAALIPRFLVKFLYQYY 1148 (1184)
Q Consensus 1096 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~l~~~~~~~~~~~~~k~~~~~~ 1148 (1184)
++.+++..+. +.. ++.....++..|+.+++..++.+++..+.|.+.++.
T Consensus 796 ~~~~~~~~~~---~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~~~ 844 (885)
T 3b8c_A 796 LIATLIAVYA---NWE-FAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAIRYI 844 (885)
T ss_dssp TTTTSSSSSC---CCC-SSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHHTTC
T ss_pred HHHHHHHHhc---ccc-ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111110 000 011233456678877777777788888889876653
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.3e-70 Score=686.55 Aligned_cols=517 Identities=18% Similarity=0.225 Sum_probs=421.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhchHhhh------cceEEEEE-CCeEEEEeeeccccccEEEEcCCCccCCceEEeee
Q 001027 146 ILPLAFVLSVTAIKDAYEDYRRHRSDRIEN------NRLANVLV-NNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLST 218 (1184)
Q Consensus 146 ~~~l~~vi~vs~~~~~~ed~~r~k~d~~~n------~~~~~V~r-~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~s 218 (1184)
+-..++++++..+.+++|++.|+|+.+.++ +.+++|+| ||++++|++++|+|||+|+|++||.||||++|++
T Consensus 188 fe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~- 266 (736)
T 3rfu_A 188 FEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQE- 266 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEE-
Confidence 334456778888999999999999865443 67888888 9999999999999999999999999999999998
Q ss_pred cCCCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeeccee
Q 001027 219 SDPTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCEL 298 (1184)
Q Consensus 219 s~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l 298 (1184)
|.++||||+|||||.|+.|.+++.. |+||++.+|.
T Consensus 267 ----G~~~VDES~LTGES~Pv~K~~gd~v-------------------------~~Gt~~~~G~---------------- 301 (736)
T 3rfu_A 267 ----GRSFVDESMVTGEPIPVAKEASAKV-------------------------IGATINQTGS---------------- 301 (736)
T ss_dssp ----SCEEEECSSSTTCSSCEEECTTCEE-------------------------CTTCEEESCC----------------
T ss_pred ----CceEeeecccCCccccEEeccCCcC-------------------------CCceEeccce----------------
Confidence 7799999999999999999998877 7788777776
Q ss_pred ecCCeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccccccc
Q 001027 299 KNTSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYR 375 (1184)
Q Consensus 299 ~nt~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl 375 (1184)
+++.|++||.+| ++++...+++.+++++|+.+|++..++++++++++++++++|.++.... .
T Consensus 302 -----~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------~--- 366 (736)
T 3rfu_A 302 -----FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------A--- 366 (736)
T ss_dssp -----CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS-------S---
T ss_pred -----EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-------h---
Confidence 899999999999 6666667778889999999999999999999999999988876543210 0
Q ss_pred ccCCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccc
Q 001027 376 RKDFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINE 455 (1184)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E 455 (1184)
+...+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|
T Consensus 367 ---------------------~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~----------a~~gilvk~~~alE 415 (736)
T 3rfu_A 367 ---------------------LSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKG----------AQSGVLIKNAEALE 415 (736)
T ss_dssp ---------------------TTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHH----------HHTTEEESCHHHHH
T ss_pred ---------------------HHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHH----------hhcceeechHHHHH
Confidence 12268889999999999999999999999988877 78899999999999
Q ss_pred cccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCcc
Q 001027 456 DLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEE 535 (1184)
Q Consensus 456 ~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~ 535 (1184)
+||++|+||||||||||+|+|++.++..++.. ++++
T Consensus 416 ~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------------------------~~~~------------ 451 (736)
T 3rfu_A 416 RMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV--------------------------------EDNA------------ 451 (736)
T ss_dssp HHTSCCEEEECCBTTTBCSSCEEEEEEESSSC--------------------------------HHHH------------
T ss_pred HhcCCCEEEEeCCCCCcCCceEEEEEEecCCC--------------------------------HHHH------------
Confidence 99999999999999999999999998733210 1111
Q ss_pred chHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeee
Q 001027 536 GKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLH 615 (1184)
Q Consensus 536 ~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~ 615 (1184)
+...+ ++ ++.++||++.|++++|++.|+.+. ...
T Consensus 452 -------l~~aa---~l---------------e~~s~hPla~Aiv~~a~~~~~~~~---------------------~~~ 485 (736)
T 3rfu_A 452 -------LALAA---AL---------------EHQSEHPLANAIVHAAKEKGLSLG---------------------SVE 485 (736)
T ss_dssp -------HHHHH---HH---------------HHSSCCHHHHHHHHHHHTTCCCCC---------------------CCS
T ss_pred -------HHHHH---HH---------------hhcCCChHHHHHHHHHHhcCCCcc---------------------Ccc
Confidence 11111 11 123579999999999998776432 234
Q ss_pred cCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHH
Q 001027 616 EFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSS 695 (1184)
Q Consensus 616 ~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~ 695 (1184)
+|++.+++.. .... +|+. +.+|+++.+.+... ......+.+++++.+|+|++++|+
T Consensus 486 ~f~~~~g~gv-~~~~-~g~~--~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~G~~vl~va~-------------- 541 (736)
T 3rfu_A 486 AFEAPTGKGV-VGQV-DGHH--VAIGNARLMQEHGG------DNAPLFEKADELRGKGASVMFMAV-------------- 541 (736)
T ss_dssp CCCCCTTTEE-EECS-SSSC--EEEESHHHHHHHCC------CCHHHHHHHHHHHHTTCEEEEEEE--------------
T ss_pred cccccCCceE-EEEE-CCEE--EEEcCHHHHHHcCC------ChhHHHHHHHHHHhcCCeEEEEEE--------------
Confidence 6777776542 2222 3332 34599987755321 123456778999999999999996
Q ss_pred HHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCC
Q 001027 696 FEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSK 775 (1184)
Q Consensus 696 ~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~ 775 (1184)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 542 ------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~-- 595 (736)
T 3rfu_A 542 ------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK-- 595 (736)
T ss_dssp ------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC--
T ss_pred ------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE--
Confidence 678999999999999999999999999999999999999999999999999832
Q ss_pred ceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee
Q 001027 776 MTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV 855 (1184)
Q Consensus 776 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v 855 (1184)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHh
Q 001027 856 LCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHG 932 (1184)
Q Consensus 856 i~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hG 932 (1184)
++++++|+||..+|+.+|+ .|+.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+.++ +.+|
T Consensus 596 v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i~~a-i~~s 671 (736)
T 3rfu_A 596 VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGIAKA-RRLS 671 (736)
T ss_dssp EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTHHHH-HHHH
T ss_pred EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHHHHHHH-HHHH
Confidence 8999999999999999998 789999999999999999999999999 56665 99999999976 4447766 8999
Q ss_pred HhHHHHHHHhHHHHHHHHHHHHHHHHHHHH--hhcccchhhhhHHHHHH
Q 001027 933 HWNYQRMGYMILYNFYRNAVLVFVLFWYVL--FTAFTLTTAINEWSSVL 979 (1184)
Q Consensus 933 r~~~~ri~~~i~~~~~kni~~~~~~~~~~~--~~~fs~~~~~~~~~~~~ 979 (1184)
|..++++++++.|.|.+|++.+.+.. ..+ +.|+..+|++....|.+
T Consensus 672 r~t~~~i~qnl~~a~~yN~~~iplAa-g~l~p~~G~~l~P~~aa~~m~~ 719 (736)
T 3rfu_A 672 ESTMSNIRQNLFFAFIYNVLGVPLAA-GVLYPLTGLLLSPMIAAAAMAL 719 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-TSSTTTSSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccchhhHHHHHHHHHh
Confidence 99999999999999999987655433 112 12333345555444444
No 7
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.3e-69 Score=671.55 Aligned_cols=488 Identities=21% Similarity=0.240 Sum_probs=400.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhchH------hhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCC
Q 001027 148 PLAFVLSVTAIKDAYEDYRRHRSDR------IENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDP 221 (1184)
Q Consensus 148 ~l~~vi~vs~~~~~~ed~~r~k~d~------~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~ 221 (1184)
..++++++..+.+++|++.++|+++ ++.+++++|+|||+++++++++|+|||+|.|++||.||||++|++
T Consensus 98 ~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~---- 173 (645)
T 3j08_A 98 TSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---- 173 (645)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE----
Confidence 3446667778899999999988754 344688999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecC
Q 001027 222 TGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNT 301 (1184)
Q Consensus 222 ~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt 301 (1184)
|.|+||||+|||||.|+.|++++.. |+||++.+|
T Consensus 174 -G~~~VdeS~LTGES~Pv~K~~g~~v-------------------------~~Gt~~~~g-------------------- 207 (645)
T 3j08_A 174 -GESYVDESMISGEPVPVLKSKGDEV-------------------------FGATINNTG-------------------- 207 (645)
T ss_dssp -CCEEEECHHHHCCSSCEEECTTCEE-------------------------CTTCEECSS--------------------
T ss_pred -CcEEEEcccccCCCCceecCCCCEe-------------------------eccEEEecC--------------------
Confidence 7799999999999999999987665 566655544
Q ss_pred CeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccccccC
Q 001027 302 SWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRKD 378 (1184)
Q Consensus 302 ~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~~ 378 (1184)
++++.|++||.+| |+++...+++.+++++++.+|++..+++++++++++++++.|.++... +|.
T Consensus 208 -~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~~---- 274 (645)
T 3j08_A 208 -VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PLL---- 274 (645)
T ss_dssp -CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSC--------SCC----
T ss_pred -cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cHH----
Confidence 4999999999999 667778888899999999999999999999888888887665432110 111
Q ss_pred CCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCccccccc
Q 001027 379 FSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDLG 458 (1184)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~LG 458 (1184)
..+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+||
T Consensus 275 --------------------~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~lg 324 (645)
T 3j08_A 275 --------------------FAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVAE 324 (645)
T ss_dssp --------------------CTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTCCCCSSTTHHHHGG
T ss_pred --------------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH----------HHCCeEecCchHHHHhh
Confidence 145667889999999999999999999888777 78899999999999999
Q ss_pred ceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccchH
Q 001027 459 QIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGKH 538 (1184)
Q Consensus 459 ~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 538 (1184)
++|+||||||||||+|+|++.++...+.. ++
T Consensus 325 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~~--------------------------------~~----------------- 355 (645)
T 3j08_A 325 KVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------ER----------------- 355 (645)
T ss_dssp GCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------------------HH-----------------
T ss_pred CCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------------------HH-----------------
Confidence 99999999999999999999999865310 11
Q ss_pred HHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCC
Q 001027 539 VYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFD 618 (1184)
Q Consensus 539 ~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~ 618 (1184)
+++...+.|+. .++||++.|+++++++.|+...... +|.
T Consensus 356 --~~l~~aa~~e~------------------~s~hPla~Aiv~~a~~~g~~~~~~~---------------------~~~ 394 (645)
T 3j08_A 356 --ELLRLAAIAER------------------RSEHPIAEAIVKKALEHGIELGEPE---------------------KVE 394 (645)
T ss_dssp --HHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCSCC---------------------CCE
T ss_pred --HHHHHHHHHhh------------------cCCChhHHHHHHHHHhcCCCcCCcc---------------------ceE
Confidence 23333444432 2469999999999999887542211 111
Q ss_pred CCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHH
Q 001027 619 SDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEA 698 (1184)
Q Consensus 619 s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~ 698 (1184)
+...+- +.. . -+++|+++.+.+. +....+.+.+++++++.+|+|++++|+
T Consensus 395 ~~~g~g-~~~----~---~v~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~l~va~----------------- 444 (645)
T 3j08_A 395 VIAGEG-VVA----D---GILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR----------------- 444 (645)
T ss_dssp EETTTE-EEE----T---TEEEECHHHHHHT-----TCCCCHHHHHHHHHHHTTTCCCEEEEE-----------------
T ss_pred EecCCc-eEE----E---EEEECCHHHHHhc-----CCCccHHHHHHHHHHHhcCCeEEEEEE-----------------
Confidence 111110 000 1 2445887766442 223456678888999999999999996
Q ss_pred HHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceE
Q 001027 699 ASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQ 778 (1184)
Q Consensus 699 a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~ 778 (1184)
|++++|+++++|++|++++++|+.|+++||++||+|||+.++|..+|+++|+..
T Consensus 445 ---------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~----- 498 (645)
T 3j08_A 445 ---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----- 498 (645)
T ss_dssp ---------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----
T ss_pred ---------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-----
Confidence 679999999999999999999999999999999999999999999999999831
Q ss_pred EEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 779 VIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 779 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
+++
T Consensus 499 -----------------------------------------------------------------------------~~~ 501 (645)
T 3j08_A 499 -----------------------------------------------------------------------------VIA 501 (645)
T ss_dssp -----------------------------------------------------------------------------EEC
T ss_pred -----------------------------------------------------------------------------EEE
Confidence 899
Q ss_pred ecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHhHhH
Q 001027 859 RVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWN 935 (1184)
Q Consensus 859 r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~ 935 (1184)
|++|+||+.+++.+++ . +.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+..+ +.+||+.
T Consensus 502 ~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i~~~r~~ 576 (645)
T 3j08_A 502 EVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSRKT 576 (645)
T ss_dssp SCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSCCTTHHHHH-HHHHHHH
T ss_pred eCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhCCEEEecCCHHHHHHH-HHHHHHH
Confidence 9999999999999998 4 8999999999999999999999999 55555 89999999965 5557777 7899999
Q ss_pred HHHHHHhHHHHHHHHHHHHHH
Q 001027 936 YQRMGYMILYNFYRNAVLVFV 956 (1184)
Q Consensus 936 ~~ri~~~i~~~~~kni~~~~~ 956 (1184)
|+|+++++.|.|++|++....
T Consensus 577 ~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 577 MSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875443
No 8
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.9e-69 Score=678.49 Aligned_cols=488 Identities=21% Similarity=0.243 Sum_probs=401.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhchHh------hhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecC
Q 001027 147 LPLAFVLSVTAIKDAYEDYRRHRSDRI------ENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSD 220 (1184)
Q Consensus 147 ~~l~~vi~vs~~~~~~ed~~r~k~d~~------~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~ 220 (1184)
-..++++++..+.+++|++.++|+++. +.+.+++|+|||++++++|++|+|||+|.|++||.||||++|++
T Consensus 175 ~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~--- 251 (723)
T 3j09_A 175 ETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE--- 251 (723)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEE---
Confidence 334566777789999999999987543 34678999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeccCCCCCCceeecccccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeec
Q 001027 221 PTGVAYLQTINLDGESNLKTRYAKQETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKN 300 (1184)
Q Consensus 221 ~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~n 300 (1184)
|.|+||||+|||||.|+.|.+++.. |+||++.+|
T Consensus 252 --G~~~VdeS~LTGES~pv~K~~g~~v-------------------------~~Gt~~~~g------------------- 285 (723)
T 3j09_A 252 --GESYVDESMISGEPVPVLKSKGDEV-------------------------FGATINNTG------------------- 285 (723)
T ss_dssp --CCEEEECHHHHCCSSCEEECTTCEE-------------------------CTTCEECSS-------------------
T ss_pred --CCeEEecccccCCCcceeecCCCee-------------------------ccceEEecC-------------------
Confidence 7799999999999999999887665 556555544
Q ss_pred CCeEEEEEEEecccc---eeeecCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCccccccccccc
Q 001027 301 TSWALGVAVYAGQET---KVMLNSSGAPSKRSWLEMHMNSEIIKLSFFLVALCTVVSICAAVWLKRHNDELDYMPYYRRK 377 (1184)
Q Consensus 301 t~~~~gvVv~tG~dT---ki~~n~~~~~~k~s~le~~~~~~~~~l~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~yl~~ 377 (1184)
++.++|++||.+| |+++....++.+++++++.+|++..++++++++++++++++|.++... +|
T Consensus 286 --~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~--------~~---- 351 (723)
T 3j09_A 286 --VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHA--------PL---- 351 (723)
T ss_dssp --CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTC--------TT----
T ss_pred --cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------cH----
Confidence 5999999999999 667778888899999999999999999999888888877655432110 11
Q ss_pred CCCCCCCCCCccccCcchhHHHHHHHHHHHhhhccchhHHHHHHHHHHHHHHHHhcCccccccccCCcceeccCcccccc
Q 001027 378 DFSEEGEPDNYKYYGWGLEILFTFLMSVIVFQVMIPISLYISMELVRLGQAYFMIQDSHMYDEASSSRFQCRALNINEDL 457 (1184)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~iP~sL~v~i~l~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~E~L 457 (1184)
...+.+++.+++.+|||+|+++++++...+...+ +++++++|+++.+|+|
T Consensus 352 --------------------~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~----------a~~gilvk~~~~lE~l 401 (723)
T 3j09_A 352 --------------------LFAFTTLIAVLVVACPCAFGLATPTALTVGMGKG----------AELGILIKNADALEVA 401 (723)
T ss_dssp --------------------CCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHH----------HTTTCEESSTTHHHHG
T ss_pred --------------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH----------HHCCeEEeChHHHHHh
Confidence 1157788999999999999999999999888777 7889999999999999
Q ss_pred cceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhhhcCCCCccch
Q 001027 458 GQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLSRSGKNTEEGK 537 (1184)
Q Consensus 458 G~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~ 537 (1184)
|++|+||||||||||+|+|+|.++...+.. ++
T Consensus 402 g~v~~i~fDKTGTLT~g~~~v~~~~~~~~~--------------------------------~~---------------- 433 (723)
T 3j09_A 402 EKVTAVIFDKTGTLTKGKPEVTDLVPLNGD--------------------------------ER---------------- 433 (723)
T ss_dssp GGCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------------------HH----------------
T ss_pred hcCCEEEEcCCCccccCceEEEEEEeCCCC--------------------------------HH----------------
Confidence 999999999999999999999999865310 11
Q ss_pred HHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecC
Q 001027 538 HVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEF 617 (1184)
Q Consensus 538 ~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F 617 (1184)
+++...+.|.. .++||++.|+++++++.|+.+.... +|
T Consensus 434 ---~~l~~aa~~e~------------------~s~hP~~~Ai~~~a~~~~~~~~~~~---------------------~~ 471 (723)
T 3j09_A 434 ---ELLRLAAIAER------------------RSEHPIAEAIVKKALEHGIELGEPE---------------------KV 471 (723)
T ss_dssp ---HHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCSCC---------------------CC
T ss_pred ---HHHHHHHHHhc------------------cCCCchhHHHHHHHHhcCCCcCCcc---------------------ce
Confidence 22333333321 2469999999999999887532211 11
Q ss_pred CCCC-ceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHH
Q 001027 618 DSDR-KRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSF 696 (1184)
Q Consensus 618 ~s~r-krmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~ 696 (1184)
.+.. +.... . .+.+|+++.+.+. +....+.+.+++++++.+|+|++++|+
T Consensus 472 ~~~~g~g~~~------~---~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~~~va~--------------- 522 (723)
T 3j09_A 472 EVIAGEGVVA------D---GILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR--------------- 522 (723)
T ss_dssp EEETTTEEEE------T---TEEEECHHHHHHT-----TCCCCHHHHHHHHHHHTTTCEEEEEEE---------------
T ss_pred EEecCCceEE------E---EEEECCHHHHHhc-----CCCccHHHHHHHHHHHhcCCeEEEEEE---------------
Confidence 1111 11111 1 2445887766442 223346678889999999999999996
Q ss_pred HHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc
Q 001027 697 EAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM 776 (1184)
Q Consensus 697 ~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~ 776 (1184)
|++++|+++++|++|++++++|+.|+++||++||+|||+..+|..+|+++|+..
T Consensus 523 -----------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~--- 576 (723)
T 3j09_A 523 -----------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL--- 576 (723)
T ss_dssp -----------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---
T ss_pred -----------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE---
Confidence 689999999999999999999999999999999999999999999999999831
Q ss_pred eEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeE
Q 001027 777 TQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVL 856 (1184)
Q Consensus 777 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi 856 (1184)
+
T Consensus 577 -------------------------------------------------------------------------------~ 577 (723)
T 3j09_A 577 -------------------------------------------------------------------------------V 577 (723)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------E
Confidence 8
Q ss_pred EEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEe-cCcchhHHHhcCcccccc--hhhHHHHHHHHhH
Q 001027 857 CCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGI-SGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGH 933 (1184)
Q Consensus 857 ~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~i-sg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr 933 (1184)
++|++|+||+.+|+.+++ . +.|+|+|||.||++||++|||||+| +|.+. |+++||+++.+ ++-+..+ +.+||
T Consensus 578 ~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i~~~r 652 (723)
T 3j09_A 578 IAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-IQLSR 652 (723)
T ss_dssp ECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH-HHHHH
T ss_pred EccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH-HHHHH
Confidence 999999999999999998 4 8999999999999999999999999 55555 89999999965 5557777 78999
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHH
Q 001027 934 WNYQRMGYMILYNFYRNAVLVFV 956 (1184)
Q Consensus 934 ~~~~ri~~~i~~~~~kni~~~~~ 956 (1184)
+.|+++++++.|.|++|++...+
T Consensus 653 ~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 653 KTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999885443
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.83 E-value=2.5e-25 Score=247.67 Aligned_cols=136 Identities=22% Similarity=0.365 Sum_probs=117.1
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHh
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 799 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 799 (1184)
+-.+.|.+.++|+++||++++|+.|++.|++++|+|||+..++..++..+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446889999999999999999999999999999999999999999999988731
Q ss_pred hcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCe
Q 001027 800 SKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDM 879 (1184)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~ 879 (1184)
+|+.+.|++|..+++.++. .+..
T Consensus 178 --------------------------------------------------------~f~~~~p~~k~~~~~~l~~-~~~~ 200 (263)
T 2yj3_A 178 --------------------------------------------------------YYSNLSPEDKVRIIEKLKQ-NGNK 200 (263)
Confidence 4555669999999999987 6788
Q ss_pred EEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccc--cchhhHHHHHHHHhHhHHHHHHH
Q 001027 880 TLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAM--GQFRFLVTLLLVHGHWNYQRMGY 941 (1184)
Q Consensus 880 vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i--~~f~~L~~lLl~hGr~~~~ri~~ 941 (1184)
|+|||||.||++|+++|++||++. +.+. +...+|+++ .++.-+..+ +..+|..++++++
T Consensus 201 ~~~VGD~~~D~~aa~~Agv~va~g~~~~~--~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 201 VLMIGDGVNDAAALALADVSVAMGNGVDI--SKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 999999999999999999999883 3332 677899999 666667666 7889999988875
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.86 E-value=2e-20 Score=210.85 Aligned_cols=272 Identities=23% Similarity=0.282 Sum_probs=194.4
Q ss_pred cCCcceeccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccCh
Q 001027 442 SSSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDP 521 (1184)
Q Consensus 442 ~~~~~~~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 521 (1184)
+++++++|+++.+|.|+++++|+||||||||.+.+.+..+...+. . ++
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~------------------------------~~ 61 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D------------------------------ER 61 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C------------------------------HH
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C------------------------------HH
Confidence 789999999999999999999999999999999999988765421 0 11
Q ss_pred hHHHhhhcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEE
Q 001027 522 HLLQLSRSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVID 601 (1184)
Q Consensus 522 ~l~~~~~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~ 601 (1184)
++ +.+|+++.. .+.||.+.|+.+++++.|+..... ..+. .
T Consensus 62 -------------------~~---l~~~~~~e~---------------~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~ 101 (287)
T 3a1c_A 62 -------------------EL---LRLAAIAER---------------RSEHPIAEAIVKKALEHGIELGEP--EKVE-V 101 (287)
T ss_dssp -------------------HH---HHHHHHHTT---------------TCCSHHHHHHHHHHHHTTCCCCCC--SCEE-E
T ss_pred -------------------HH---HHHHHHHhh---------------cCCCHHHHHHHHHHHhcCCCcccc--ccce-e
Confidence 11 222332211 247999999999999988742110 0000 0
Q ss_pred EcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEE
Q 001027 602 IQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGM 681 (1184)
Q Consensus 602 ~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~ 681 (1184)
..| +.+.. .. +.+|.++.+.+. +...++.+.+..+.+..+|.+++++++
T Consensus 102 ~~G-----------------~~~~~------~~---~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~i~~~~ 150 (287)
T 3a1c_A 102 IAG-----------------EGVVA------DG---ILVGNKRLMEDF-----GVAVSNEVELALEKLEREAKTAVIVAR 150 (287)
T ss_dssp ETT-----------------TEEEE------TT---EEEECHHHHHHT-----TCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ecC-----------------CCeEE------EE---EEECCHHHHHhc-----CCCccHHHHHHHHHHHhCCCeEEEEEE
Confidence 001 01110 11 234655443221 111113345667788889999999996
Q ss_pred EecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 682 RELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 682 r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
|..++|.+..++++.||+.++|+.|+++|+++.++||+....
T Consensus 151 --------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~ 192 (287)
T 3a1c_A 151 --------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRS 192 (287)
T ss_dssp --------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred --------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHH
Confidence 557899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHH
Q 001027 762 AISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSEL 841 (1184)
Q Consensus 762 Ai~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~ 841 (1184)
+..+...+|+..
T Consensus 193 ~~~~l~~~gl~~-------------------------------------------------------------------- 204 (287)
T 3a1c_A 193 AEAISRELNLDL-------------------------------------------------------------------- 204 (287)
T ss_dssp HHHHHHHHTCSE--------------------------------------------------------------------
T ss_pred HHHHHHHhCCce--------------------------------------------------------------------
Confidence 999999988731
Q ss_pred HHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccc--c
Q 001027 842 DEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAM--G 919 (1184)
Q Consensus 842 ~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i--~ 919 (1184)
.|..+.|..|...++.+.. . ..++||||+.||+.|.+.|++||++..... .+...+|+++ .
T Consensus 205 --------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~-~~~~~ad~v~~~~ 267 (287)
T 3a1c_A 205 --------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSD-VAVESGDIVLIRD 267 (287)
T ss_dssp --------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCSC-CSSCCSSEEESSS
T ss_pred --------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCCH-HHHhhCCEEEeCC
Confidence 5555668999999999887 5 889999999999999999999998842211 1456799999 7
Q ss_pred chhhHHHHHHHHhHhHHHHHH
Q 001027 920 QFRFLVTLLLVHGHWNYQRMG 940 (1184)
Q Consensus 920 ~f~~L~~lLl~hGr~~~~ri~ 940 (1184)
++.-+..+ +..+|.++++++
T Consensus 268 ~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 268 DLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CTHHHHHH-HHTTC-------
T ss_pred CHHHHHHH-HHHHHHHHHhhC
Confidence 77777766 788888887763
No 11
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.81 E-value=1.1e-18 Score=195.06 Aligned_cols=273 Identities=24% Similarity=0.284 Sum_probs=185.2
Q ss_pred eccCcccccccceeEEEEcCCCCcccceeEEEEEEEeCeecCCCCCcCcccccccccccCCcccCCCcccccChhHHHhh
Q 001027 448 CRALNINEDLGQIKYVFSDKTGTLTENKMEFRCASIWGIDYSGGNARSHSEEVGYSVQVDGKVLRPKLTVNVDPHLLQLS 527 (1184)
Q Consensus 448 ~r~~~~~E~LG~V~~I~sDKTGTLT~n~m~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 527 (1184)
+|+++.+|.+++++.|+|||+||||.|+|++.++...+.. ++
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~--------------------------------~~------ 42 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS--------------------------------ED------ 42 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC--------------------------------HH------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC--------------------------------HH------
Confidence 4788899999999999999999999999999988643210 11
Q ss_pred hcCCCCccchHHHHHHHHHHHhcccccCcccCCCCCCcceeeecCChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCcee
Q 001027 528 RSGKNTEEGKHVYDFFLALAACNTIVPLVVDTSDPNVKLVDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQ 607 (1184)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~la~Cht~~~~~~~~~~~~~~~~~y~~~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~ 607 (1184)
+++..++.+.. .+.+|...++.++++..|+..... .
T Consensus 43 -------------~~~~~~~~~~~------------------~s~~~~~~a~~~~~~~~g~~~~~~-------------~ 78 (280)
T 3skx_A 43 -------------ELLQIAASLEA------------------RSEHPIAAAIVEEAEKRGFGLTEV-------------E 78 (280)
T ss_dssp -------------HHHHHHHHHHT------------------TCCSHHHHHHHHHHHHTTCCCCCC-------------E
T ss_pred -------------HHHHHHHHhhc------------------cCCCHHHHHHHHHHHhcCCCCCCc-------------c
Confidence 22333332221 135789999999999988743210 0
Q ss_pred eEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHH
Q 001027 608 RFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSAS 687 (1184)
Q Consensus 608 ~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~ 687 (1184)
.+. .++ .+.+...+ ++... ..|..+.+.+..... ...+.++...|.+.+.+++
T Consensus 79 ~~~---~~~----g~~~~~~~---~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~------ 131 (280)
T 3skx_A 79 EFR---AIP----GKGVEGIV---NGRRY--MVVSPGYIRELGIKT---------DESVEKLKQQGKTVVFILK------ 131 (280)
T ss_dssp EEE---EET----TTEEEEEE---TTEEE--EEECHHHHHHTTCCC---------CTTHHHHHTTTCEEEEEEE------
T ss_pred cee---ecC----CCEEEEEE---CCEEE--EEecHHHHHHcCCCc---------hHHHHHHHhCCCeEEEEEE------
Confidence 010 000 11122222 12211 225555543321111 1334567778888888775
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHH
Q 001027 688 EFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY 767 (1184)
Q Consensus 688 e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~ 767 (1184)
+..++|.+.++|++.+|+.++++.|++.|+++.++||+....+..+..
T Consensus 132 --------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~ 179 (280)
T 3skx_A 132 --------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAE 179 (280)
T ss_dssp --------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHH
Confidence 567899999999999999999999999999999999999999999999
Q ss_pred HcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHH
Q 001027 768 SSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQ 847 (1184)
Q Consensus 768 ~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~ 847 (1184)
.+|+..
T Consensus 180 ~~gl~~-------------------------------------------------------------------------- 185 (280)
T 3skx_A 180 ELGLDD-------------------------------------------------------------------------- 185 (280)
T ss_dssp HHTCSE--------------------------------------------------------------------------
T ss_pred HcCChh--------------------------------------------------------------------------
Confidence 988732
Q ss_pred HhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcCeeEEecC-cchhHHHhcCcccc--cchhhH
Q 001027 848 LAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVSMIQMADVGVGISG-QEGRQAVMSSDFAM--GQFRFL 924 (1184)
Q Consensus 848 l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~AdVGI~isg-~e~~qA~~asD~~i--~~f~~L 924 (1184)
.|..+.|.+|...++-+.+ . ..++|||||.||+.|++.|++||++.. .+. +...||+++ .+..-+
T Consensus 186 --------~f~~~~~~~k~~~~k~~~~-~-~~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~--~~~~a~~~~~~~~~~~l 253 (280)
T 3skx_A 186 --------YFAEVLPHEKAEKVKEVQQ-K-YVTAMVGDGVNDAPALAQADVGIAIGAGTDV--AVETADIVLVRNDPRDV 253 (280)
T ss_dssp --------EECSCCGGGHHHHHHHHHT-T-SCEEEEECTTTTHHHHHHSSEEEECSCCSSS--CCCSSSEECSSCCTHHH
T ss_pred --------HhHhcCHHHHHHHHHHHHh-c-CCEEEEeCCchhHHHHHhCCceEEecCCcHH--HHhhCCEEEeCCCHHHH
Confidence 5666778999999998887 3 367999999999999999999999943 332 667899988 566667
Q ss_pred HHHHHHHhHhHHHHHHHhHHHHHH
Q 001027 925 VTLLLVHGHWNYQRMGYMILYNFY 948 (1184)
Q Consensus 925 ~~lLl~hGr~~~~ri~~~i~~~~~ 948 (1184)
..+ +..+|..++++++++.|++.
T Consensus 254 ~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 254 AAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp HHH-HHHHHTCCC-----------
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHh
Confidence 776 67889888888877776653
No 12
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.77 E-value=2.8e-19 Score=170.27 Aligned_cols=96 Identities=23% Similarity=0.278 Sum_probs=88.3
Q ss_pred hHhhhcceEEEEECCeEEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeeccccccccc
Q 001027 171 DRIENNRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAKQETLLK 250 (1184)
Q Consensus 171 d~~~n~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~~~~~~~ 250 (1184)
...+.+.+++|+|+|+++++++++|+|||+|.|++||.||||++|++ |.++||||+|||||.|+.|.+++..
T Consensus 6 L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~-----g~~~vdeS~LTGEs~pv~k~~g~~v--- 77 (113)
T 2hc8_A 6 LVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVE-----GESYVDESMISGEPVPVLKSKGDEV--- 77 (113)
T ss_dssp HHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEE-----CCEEEECHHHHCCSSCEEECTTCEE---
T ss_pred HhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE-----ceEEEEccccCCCCccEEECCCCEE---
Confidence 45677889999999999999999999999999999999999999999 6699999999999999999998776
Q ss_pred CcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee
Q 001027 251 VPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1184)
Q Consensus 251 ~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki 317 (1184)
|+|+++.+|. +.++|++||.+|.+
T Consensus 78 ----------------------~aGt~~~~G~---------------------~~~~V~~~g~~T~~ 101 (113)
T 2hc8_A 78 ----------------------FGATINNTGV---------------------LKIRATRVGGETLL 101 (113)
T ss_dssp ----------------------CTTCEECSSC---------------------EEEEEEECGGGSHH
T ss_pred ----------------------EeCCEEeece---------------------EEEEEEEecCcCHH
Confidence 8888888776 99999999999954
No 13
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.70 E-value=8.1e-18 Score=163.07 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=85.7
Q ss_pred hHhhhcceEEEEECCe------EEEEeeeccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCCCCceeeccc
Q 001027 171 DRIENNRLANVLVNNQ------FQEKKWKDIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGESNLKTRYAK 244 (1184)
Q Consensus 171 d~~~n~~~~~V~r~g~------~~~i~~~~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGEs~~k~K~~~ 244 (1184)
...+.+..++|+|+|. ++.++.++|+|||+|.|++||.||||++|++ |.+.||||+|||||.|+.|.++
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~-----g~~~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIE-----GHSMVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECS-----CCCEEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEE-----ccEEEEeccccCCCccEEeCCC
Confidence 3456689999999664 7899999999999999999999999999999 5589999999999999999998
Q ss_pred ccccccCcccccceEEEEecCCCCCceeeEEEEEECCeeeecCCCCeEeecceeecCCeEEEEEEEeccccee
Q 001027 245 QETLLKVPEKETISGLIKCEKPNRNIYGFHANMEVDGKRLSLGPSNILLRGCELKNTSWALGVAVYAGQETKV 317 (1184)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~e~pn~~l~~f~Gt~~~~g~~~~l~~~nillrGs~l~nt~~~~gvVv~tG~dTki 317 (1184)
+.. |+||++.+|. +.+.|+.||.+|.+
T Consensus 87 ~~v-------------------------~aGt~~~~G~---------------------~~~~v~~~g~~T~~ 113 (124)
T 2kij_A 87 STV-------------------------IAGSINQNGS---------------------LLICATHVGADTTL 113 (124)
T ss_dssp EEE-------------------------CTTCEEESSC---------------------CEEEECSCTTTCHH
T ss_pred CEE-------------------------EcCCEEeeeE---------------------EEEEEEEecccCHH
Confidence 776 8888888776 89999999999954
No 14
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.68 E-value=7.5e-18 Score=173.23 Aligned_cols=125 Identities=22% Similarity=0.277 Sum_probs=100.8
Q ss_pred CChhHHHHHHHHHHcCCEEEeecCCeEEEEEcCceeeEEEeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHHHHH
Q 001027 572 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIQGQRQRFNVLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFSVIA 651 (1184)
Q Consensus 572 ~sP~E~Alv~~a~~~g~~~~~r~~~~i~i~~~~~~~~~~il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~~~~ 651 (1184)
.+|.|.|+++++...+.. .....|+++..+||||+|||||++++.++|+.++++|||||+|+++|+
T Consensus 33 ~n~~d~Ail~~~~~~~~~--------------~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~ 98 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESAR--------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCS 98 (170)
T ss_dssp CCHHHHHHHHTSCHHHHH--------------HHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEE
T ss_pred CChHHHHHHHHHHhcChh--------------hhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhH
Confidence 589999999987543210 013578999999999999999999998888999999999999999997
Q ss_pred hh--------hchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEE
Q 001027 652 KA--------LNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCI 723 (1184)
Q Consensus 652 ~~--------~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~l 723 (1184)
.. .+++.++.+.+.+++|+.+|+|||++|||.++..+-. .....|+||+|
T Consensus 99 ~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----------------------~~~~~E~~L~f 156 (170)
T 3gwi_A 99 QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----------------------YQRADESDLIL 156 (170)
T ss_dssp EEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----------------------CCGGGSCSEEE
T ss_pred HHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----------------------cCccccCCcEE
Confidence 42 1345678899999999999999999999998654200 01246899999
Q ss_pred EEeeccccc
Q 001027 724 LGASGIEDK 732 (1184)
Q Consensus 724 lG~~~ieD~ 732 (1184)
+|++|+-|.
T Consensus 157 ~G~~g~~~~ 165 (170)
T 3gwi_A 157 EGYIAFLDH 165 (170)
T ss_dssp EEEEEEEC-
T ss_pred Eehhccccc
Confidence 999999874
No 15
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.68 E-value=6e-18 Score=191.59 Aligned_cols=139 Identities=12% Similarity=0.074 Sum_probs=102.6
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
..+++++|++++++.|+++|+++.|+|||...++..+|+++|+..++..++.-...-
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~----------------------- 194 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF----------------------- 194 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE-----------------------
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE-----------------------
Confidence 358999999999999999999999999999999999999999976654433111000
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcC
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAN 888 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~N 888 (1184)
. .......+.+.... .+++..|.+|...+..+++ .++.|+|+|||+|
T Consensus 195 ----~-------~~~~~~~~~~~~i~---------------------~~~k~~~~~k~~~~~~~~~-~~~~v~~vGDGiN 241 (297)
T 4fe3_A 195 ----D-------ENGVLKGFKGELIH---------------------VFNKHDGALKNTDYFSQLK-DNSNIILLGDSQG 241 (297)
T ss_dssp ----C-------TTSBEEEECSSCCC---------------------TTCHHHHHHTCHHHHHHTT-TCCEEEEEESSGG
T ss_pred ----c-------ccceeEeccccccc---------------------hhhcccHHHHHHHHHHhhc-cCCEEEEEeCcHH
Confidence 0 00111122222111 4677788999888888887 7889999999999
Q ss_pred Chhhh---hhcCeeEEec--Ccc----hhHHHhcCcccccchhh
Q 001027 889 DVSMI---QMADVGVGIS--GQE----GRQAVMSSDFAMGQFRF 923 (1184)
Q Consensus 889 Dv~mL---~~AdVGI~is--g~e----~~qA~~asD~~i~~f~~ 923 (1184)
|+||+ ..|||||+|. +.+ .-.|++++|+++.++++
T Consensus 242 Da~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~ 285 (297)
T 4fe3_A 242 DLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEES 285 (297)
T ss_dssp GGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCB
T ss_pred HHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCC
Confidence 99995 4999999873 111 11268999999998766
No 16
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.02 E-value=6.8e-10 Score=116.50 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=103.8
Q ss_pred EEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhc
Q 001027 722 CILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSK 801 (1184)
Q Consensus 722 ~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 801 (1184)
..++...++|.+ +|+.|+++|+++.++||+..+.+..++..+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 344555555444 9999999999999999999999999999999832
Q ss_pred ccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCC
Q 001027 802 KLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSD 878 (1184)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~ 878 (1184)
++... ..|...++.+.+. ...
T Consensus 88 ------------------------------------------------------~f~~~--~~K~~~~~~~~~~~g~~~~ 111 (189)
T 3mn1_A 88 ------------------------------------------------------LFQGR--EDKLVVLDKLLAELQLGYE 111 (189)
T ss_dssp ------------------------------------------------------EECSC--SCHHHHHHHHHHHHTCCGG
T ss_pred ------------------------------------------------------HhcCc--CChHHHHHHHHHHcCCChh
Confidence 12111 6777777766654 246
Q ss_pred eEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc------hhhHHHHHHHHhHhHHHHHHHhHHHHHHHH
Q 001027 879 MTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWNYQRMGYMILYNFYRN 950 (1184)
Q Consensus 879 ~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr~~~~ri~~~i~~~~~kn 950 (1184)
.++||||+.||++|++.|++|+++..... .+...||+++.+ .+.+.++ +...|..++++.+.++|.+.+|
T Consensus 112 ~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 112 QVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp GEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC---
T ss_pred HEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccccc
Confidence 79999999999999999999999943322 277889999887 4556666 4567889999999988887665
No 17
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=98.70 E-value=2.4e-08 Score=114.48 Aligned_cols=151 Identities=22% Similarity=0.233 Sum_probs=95.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|+++|+++.|+||+....+..++..+|+..--...+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l-------------------------------- 225 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTL-------------------------------- 225 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE--------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeee--------------------------------
Confidence 689999999999999999999999999999999999999842100000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~N 888 (1184)
-+.+|..-..... --..++.|...++.+.+. ....|+|||||.|
T Consensus 226 --------------~~~d~~~tg~~~~-------------------~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~n 272 (335)
T 3n28_A 226 --------------EIVSGKLTGQVLG-------------------EVVSAQTKADILLTLAQQYDVEIHNTVAVGDGAN 272 (335)
T ss_dssp --------------EEETTEEEEEEES-------------------CCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGG
T ss_pred --------------EeeCCeeeeeecc-------------------cccChhhhHHHHHHHHHHcCCChhhEEEEeCCHH
Confidence 0111110000000 001234566666555443 3468999999999
Q ss_pred ChhhhhhcCeeEEecCcchhHHHhcCcccccc--hhhHHHHHHHHhHhHHHHHHHhHHHHHHHH
Q 001027 889 DVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFLVTLLLVHGHWNYQRMGYMILYNFYRN 950 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e~~qA~~asD~~i~~--f~~L~~lLl~hGr~~~~ri~~~i~~~~~kn 950 (1184)
|++|++.|++|+++.+.+. .+..||+++.. +.-+..+ +......-+|++.++++.+.+|
T Consensus 273 Di~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 273 DLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp GHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred HHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 9999999999999965554 77889998754 3223333 3333334457888888877665
No 18
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.68 E-value=4.4e-08 Score=101.68 Aligned_cols=129 Identities=12% Similarity=0.065 Sum_probs=91.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCC
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 812 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1184)
+.+++.++|+.|+++|++++++||+....+..+++.+|+-.
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 34456799999999999999999999999999999988731
Q ss_pred cCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC---CeEEEEcCCcCC
Q 001027 813 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS---DMTLAIGDGAND 889 (1184)
Q Consensus 813 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g---~~vl~iGDG~ND 889 (1184)
.+.. .+.|...++.+.+..| ..|++|||+.||
T Consensus 77 -------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~D 111 (180)
T 1k1e_A 77 -------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAYIGDDSVD 111 (180)
T ss_dssp -------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGG
T ss_pred -------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 2556776665544323 679999999999
Q ss_pred hhhhhhcCeeEEecCcchhHHHhcCcccccchh------hHHHHHHHHhHhHHHHHHHhHHHHH
Q 001027 890 VSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR------FLVTLLLVHGHWNYQRMGYMILYNF 947 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~------~L~~lLl~hGr~~~~ri~~~i~~~~ 947 (1184)
++|++.|++++++..... .+...||+++.+.. .+.+. +...|..++++...+.|.+
T Consensus 112 i~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 112 LPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp HHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred HHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 999999999999843222 26678999987631 22333 2233444666665555543
No 19
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=98.66 E-value=2.5e-08 Score=104.98 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=76.4
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
.|+.|+++|+++.|+||+....+..++..+|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999831
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
++... +.|...++.+.+. ....+++|||+.||++|++.|
T Consensus 94 ------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~a 135 (195)
T 3n07_A 94 ------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKV 135 (195)
T ss_dssp ------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTS
T ss_pred ------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHC
Confidence 22222 5676666666543 346799999999999999999
Q ss_pred CeeEEecCcchhHHHhcCcccccc
Q 001027 897 DVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 897 dVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
++|+++..... .++..||+++..
T Consensus 136 g~~va~~na~~-~~~~~ad~v~~~ 158 (195)
T 3n07_A 136 ALRVCVADGHP-LLAQRANYVTHI 158 (195)
T ss_dssp SEEEECTTSCH-HHHHHCSEECSS
T ss_pred CCEEEECChHH-HHHHhCCEEEcC
Confidence 99999943332 277889999865
No 20
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=98.66 E-value=4.5e-08 Score=104.28 Aligned_cols=107 Identities=15% Similarity=0.143 Sum_probs=83.6
Q ss_pred EEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcc
Q 001027 723 ILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKK 802 (1184)
Q Consensus 723 llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 802 (1184)
.+....+.|.+ +|+.|+++|+++.|+||+....+..++..+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34444555544 9999999999999999999999999999999832
Q ss_pred cccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCe
Q 001027 803 LKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDM 879 (1184)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~ 879 (1184)
++... +.|...++.+.+. ....
T Consensus 118 -----------------------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~ 142 (211)
T 3ij5_A 118 -----------------------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQ 142 (211)
T ss_dssp -----------------------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGG
T ss_pred -----------------------------------------------------hhccc--CChHHHHHHHHHHcCcCcce
Confidence 22222 6677777777654 3568
Q ss_pred EEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 880 TLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 880 vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
|+||||+.||++|++.|++++++..... .++..||+++..
T Consensus 143 ~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~ 182 (211)
T 3ij5_A 143 VAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRI 182 (211)
T ss_dssp EEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSS
T ss_pred EEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeC
Confidence 9999999999999999999999944322 267889999865
No 21
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.62 E-value=1.1e-07 Score=98.47 Aligned_cols=106 Identities=13% Similarity=0.167 Sum_probs=82.7
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+|+.|+++|+++.++||+....+..++..+|+-
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999872
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
+++. .+.|...++.+.+. ....+++|||+.||++|++.|
T Consensus 80 ------------------------------------~~~~--~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a 121 (176)
T 3mmz_A 80 ------------------------------------VLHG--IDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALV 121 (176)
T ss_dssp ------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHS
T ss_pred ------------------------------------eEeC--CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 1111 15677777766554 236799999999999999999
Q ss_pred CeeEEecCcchhHHHhcCcccccc------hhhHHHHHHHH
Q 001027 897 DVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVH 931 (1184)
Q Consensus 897 dVGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~h 931 (1184)
++|+++..... .+...||+++.+ .+.+.++|+.|
T Consensus 122 g~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~~~ 161 (176)
T 3mmz_A 122 GWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWILGP 161 (176)
T ss_dssp SEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 99999943322 277789999987 55666665443
No 22
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.62 E-value=7.4e-08 Score=98.66 Aligned_cols=107 Identities=11% Similarity=0.050 Sum_probs=80.7
Q ss_pred CcEEEEeecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHH--HcCccCCCceEEEEeCCChHHHHHHHHHHH
Q 001027 720 NLCILGASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGY--SSKLLTSKMTQVIINSNSKESCRKSLEDAI 797 (1184)
Q Consensus 720 dl~llG~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~--~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~ 797 (1184)
+...++.+.++|. .+|+.|++.|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 4456677777776 3899999999999999999 67777877 34431
Q ss_pred HhhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC-
Q 001027 798 AMSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT- 876 (1184)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~- 876 (1184)
++ ..+++|...++.+.+..
T Consensus 77 ----------------------------------------------------------~~--~g~~~K~~~l~~~~~~~g 96 (168)
T 3ewi_A 77 ----------------------------------------------------------TE--VSVSDKLATVDEWRKEMG 96 (168)
T ss_dssp ----------------------------------------------------------EE--CSCSCHHHHHHHHHHHTT
T ss_pred ----------------------------------------------------------EE--ECCCChHHHHHHHHHHcC
Confidence 11 12356888777776543
Q ss_pred --CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 877 --SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 877 --g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
...++|+||+.||++|++.|++++++..... .++..||+++..
T Consensus 97 i~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 97 LCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp CCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred cChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 3579999999999999999999999943322 288899999865
No 23
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.62 E-value=1.3e-07 Score=105.12 Aligned_cols=200 Identities=18% Similarity=0.215 Sum_probs=107.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCce----------------EEEEeCCChHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMT----------------QVIINSNSKESCRKSLE 794 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~----------------~i~i~~~~~~~~~~~~~ 794 (1184)
..+-+.+.++|++|++.|+++.+.||.....+..+...+|+...... .+.-..-+.+...+.++
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 35678899999999999999999999999999999999987311111 22222223444444444
Q ss_pred HHHHhhcccccCCCCCCCcC-CC------------------C-----CcCCCcEEEEEcCcchhhhcchHHHHHHHHHh-
Q 001027 795 DAIAMSKKLKTVPGVSHNSE-RS------------------S-----GAGVAQLALIIDGTSLVYILDSELDEQLFQLA- 849 (1184)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~-~~------------------~-----~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~- 849 (1184)
.................... .. . ........++.+..... +.+.+.+.+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~----~~~~~~l~~~~~ 176 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKL----IPVESELCIRLQ 176 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHH----HHHHHHHHHHTT
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHH----HHHHHHHHHHhc
Confidence 33322111111000000000 00 0 00001111222211100 11222222211
Q ss_pred ccCCeeE----EEecCcc--cHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 850 GTCSVVL----CCRVAPL--QKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 850 ~~~~~vi----~~r~sP~--qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.....+. +....|. .|+..++.+.++. ...|+++||+.||.+|++.|++||+|.... ..++.+||++..+
T Consensus 177 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~ 255 (279)
T 4dw8_A 177 GKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQ-EPVKKAADYITLT 255 (279)
T ss_dssp TTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECCC
T ss_pred CCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCc-HHHHHhCCEEcCC
Confidence 1122211 2245555 8999998887653 357999999999999999999999994332 2378889999865
Q ss_pred h------hhHHHHHHHHhHhH
Q 001027 921 F------RFLVTLLLVHGHWN 935 (1184)
Q Consensus 921 f------~~L~~lLl~hGr~~ 935 (1184)
. +.+.+++..+||..
T Consensus 256 ~~e~Gv~~~i~~~~~~~~~~~ 276 (279)
T 4dw8_A 256 NDEDGVAEAIERIFNVEGHHH 276 (279)
T ss_dssp GGGTHHHHHHHHHC-------
T ss_pred CCCcHHHHHHHHHHhcccccc
Confidence 2 33677777788753
No 24
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.60 E-value=2.1e-07 Score=104.08 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=56.1
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc------hhhHHHHHHHHhH
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGH 933 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr 933 (1184)
..|+..++.+.++.| ..|+++||+.||++|++.|++||+|..... .++..||++..+ -+.+.+++..+++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~s~~edGv~~~i~~~~~~~~~ 279 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVP-EIKRKADWVTRSNDEQGVAYMMKEYFRMQQR 279 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCTTTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcH-HHHHhcCEECCCCCccHHHHHHHHHHHhcCc
Confidence 579999988876533 579999999999999999999999943332 278899999865 2347777777777
Q ss_pred hHHHHHHHh
Q 001027 934 WNYQRMGYM 942 (1184)
Q Consensus 934 ~~~~ri~~~ 942 (1184)
+-|.+-..+
T Consensus 280 ~~~~~~~~~ 288 (290)
T 3dnp_A 280 KGFLDKFHM 288 (290)
T ss_dssp C--------
T ss_pred ccHHhHhcc
Confidence 776654443
No 25
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.57 E-value=3.1e-07 Score=102.04 Aligned_cols=203 Identities=15% Similarity=0.144 Sum_probs=98.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCc---------------eEEEEeCCChHHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKM---------------TQVIINSNSKESCRKSLED 795 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~---------------~~i~i~~~~~~~~~~~~~~ 795 (1184)
..+-+.+.++|++|++.|+++.+.||.....+..+...+|+..+.. +.+.-..-+.+.....++.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAW 100 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHH
Confidence 3567788999999999999999999999999999999998753221 2222222234444444443
Q ss_pred HHHhhcccccCCCCCCCcCCC-----------------------CCc-CCCcEEEEEcCcc-hhhhcchHHHHHHHH-Hh
Q 001027 796 AIAMSKKLKTVPGVSHNSERS-----------------------SGA-GVAQLALIIDGTS-LVYILDSELDEQLFQ-LA 849 (1184)
Q Consensus 796 ~~~~~~~~~~~~~~~~~~~~~-----------------------~~~-~~~~~~lvi~G~~-l~~~l~~~~~~~f~~-l~ 849 (1184)
.........+........... ... ......+++.+.. ....+.+.+...+.. +.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 101 ARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 332211111100000000000 000 0011111111111 000000111111111 11
Q ss_pred ccCCeeEEEecCc--ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEec-CcchhHHHhcCcccccc---
Q 001027 850 GTCSVVLCCRVAP--LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQ--- 920 (1184)
Q Consensus 850 ~~~~~vi~~r~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~is-g~e~~qA~~asD~~i~~--- 920 (1184)
.....--+....| ..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|. +.+. .+.+||++..+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~--~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE--VKEAAQAVTLTNAE 258 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH--HHHHCSCBC-----
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH--HHHhcceeccCCCc
Confidence 0001112334444 359999988876543 57999999999999999999999994 3443 78889999865
Q ss_pred ---hhhHHHHHHHHhHhH
Q 001027 921 ---FRFLVTLLLVHGHWN 935 (1184)
Q Consensus 921 ---f~~L~~lLl~hGr~~ 935 (1184)
-+.+.++++-+||..
T Consensus 259 ~Gv~~~i~~~~~~~~~~~ 276 (279)
T 3mpo_A 259 NGVAAAIRKYALNEGHHH 276 (279)
T ss_dssp -CHHHHHC----------
T ss_pred cHHHHHHHHHhcccCccc
Confidence 233666667777643
No 26
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=98.56 E-value=1.4e-07 Score=96.09 Aligned_cols=109 Identities=22% Similarity=0.153 Sum_probs=83.5
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+++.|+++|+++.++||+....+..++..+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998842
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
.+... +.|...++.+.+. ....++||||+.||+.|.+.|
T Consensus 73 ------------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~a 114 (164)
T 3e8m_A 73 ------------------------------------LFQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRV 114 (164)
T ss_dssp ------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTS
T ss_pred ------------------------------------eeccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 11111 4566666555443 346799999999999999999
Q ss_pred CeeEEe-cCcchhHHHhcCcccccc------hhhHHHHHHHHhHhH
Q 001027 897 DVGVGI-SGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWN 935 (1184)
Q Consensus 897 dVGI~i-sg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr~~ 935 (1184)
++++++ .+.+. +...||+++.+ ++.+.+.++ +|+|.
T Consensus 115 g~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 115 GIAGVPASAPFY--IRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp SEEECCTTSCHH--HHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred CCeEEcCChHHH--HHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 999988 34433 77889999987 555555545 66654
No 27
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=98.50 E-value=1.7e-07 Score=101.12 Aligned_cols=174 Identities=17% Similarity=0.108 Sum_probs=97.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCC----CceEEE------E-eCCChHHHHHHHHHHHH
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTS----KMTQVI------I-NSNSKESCRKSLEDAIA 798 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~----~~~~i~------i-~~~~~~~~~~~~~~~~~ 798 (1184)
+.++.+.+.++|++|+++|++++++||+....+..++..+|+-.. +...+. + ..... +....+ +...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-~~~~~i-~~~~ 97 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-GTNKFL-EEMS 97 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-HHHHHH-HHHT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-HHHHHH-HHHH
Confidence 456788999999999999999999999999999999999887421 000111 1 11111 112222 2221
Q ss_pred hhcccccCCCCCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHHH
Q 001027 799 MSKKLKTVPGVSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALVK 873 (1184)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~v---i~~r~sP--~qK~~iV~~lk 873 (1184)
.. ......... .. ....+.. + +. ..+.+..+.+.+.. .+..+ -+..+.| ..|+..++.+.
T Consensus 98 ~~----~~~~~~~~~-~~---~~~~~~~-~----~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~ 162 (227)
T 1l6r_A 98 KR----TSMRSILTN-RW---REASTGF-D----ID-PEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLK 162 (227)
T ss_dssp TT----SSCBCCGGG-GG---CSSSEEE-B----CC-GGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHH
T ss_pred HH----hcCCccccc-cc---eecccce-E----Ee-cCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHH
Confidence 10 000000000 00 0001100 0 00 11111112222211 11111 0223445 69999999887
Q ss_pred hcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 874 TRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 874 ~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
+..| ..|+++|||.||.+|++.|++||++..... ..+..||+++.+.
T Consensus 163 ~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 163 EMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 6533 579999999999999999999999943322 3667899988653
No 28
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=98.50 E-value=1.2e-07 Score=99.51 Aligned_cols=114 Identities=21% Similarity=0.213 Sum_probs=81.2
Q ss_pred HHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCcC
Q 001027 741 IESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGAG 820 (1184)
Q Consensus 741 I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1184)
|+.|+++|+++.++||+....+..++..+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999998842
Q ss_pred CCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcC
Q 001027 821 VAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMAD 897 (1184)
Q Consensus 821 ~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~Ad 897 (1184)
++... +.|...++.+.+. ....++||||+.||++|++.|+
T Consensus 88 -----------------------------------~~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag 130 (191)
T 3n1u_A 88 -----------------------------------YYKGQ--VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVG 130 (191)
T ss_dssp -----------------------------------EECSC--SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred -----------------------------------ceeCC--CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence 11111 2233333333221 4567999999999999999999
Q ss_pred eeEEecCcchhHHHhcCcccccc------hhhHHHHHHHHhHhHHHHHH
Q 001027 898 VGVGISGQEGRQAVMSSDFAMGQ------FRFLVTLLLVHGHWNYQRMG 940 (1184)
Q Consensus 898 VGI~isg~e~~qA~~asD~~i~~------f~~L~~lLl~hGr~~~~ri~ 940 (1184)
+++++.+... .+...||+++.+ .+.+..+ +...+..|..+.
T Consensus 131 ~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~ 177 (191)
T 3n1u_A 131 LGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAI 177 (191)
T ss_dssp EEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHH
T ss_pred CEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHH
Confidence 9999844332 377889999877 4445555 334454554443
No 29
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.39 E-value=3.3e-07 Score=95.65 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.++++.|++.|++++++||+....+..+ ..+|+-.- ..
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~---------------------------------- 122 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN---------------------------------- 122 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE----------------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee----------------------------------
Confidence 7899999999999999999999999988887777 76765321 00
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
.+......+ -.....|..|+..++.+ ....+++|||+.||+.
T Consensus 123 -------------~~~~~~~~~----------------------~~~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~ 164 (201)
T 4ap9_A 123 -------------RAIFEDGKF----------------------QGIRLRFRDKGEFLKRF---RDGFILAMGDGYADAK 164 (201)
T ss_dssp -------------EEEEETTEE----------------------EEEECCSSCHHHHHGGG---TTSCEEEEECTTCCHH
T ss_pred -------------eEEeeCCce----------------------ECCcCCccCHHHHHHhc---CcCcEEEEeCCHHHHH
Confidence 011111000 11455678899888877 3567999999999999
Q ss_pred hhhhcCeeEEecCcchhHHHhcCcccccchhhHHHH
Q 001027 892 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 892 mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
|++.|++||++..... .||+++.++.-+..+
T Consensus 165 ~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 165 MFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp HHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred HHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 9999999999954443 789999987776655
No 30
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.33 E-value=7.3e-07 Score=94.48 Aligned_cols=130 Identities=18% Similarity=0.259 Sum_probs=89.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|++++++|+.....+..+...+|+..--...+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~------------------------------- 122 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTL------------------------------- 122 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE-------------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhcccee-------------------------------
Confidence 4689999999999999999999999999999999988888742110010
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
..+...+. ..+.+. ..++.|..+++.+.+. ....+++|||+
T Consensus 123 ----------------~~~~~~~~-------------------~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs 167 (217)
T 3m1y_A 123 ----------------IVENDALN-------------------GLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDG 167 (217)
T ss_dssp ----------------EEETTEEE-------------------EEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECS
T ss_pred ----------------EEeCCEEE-------------------eeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCC
Confidence 00000000 001111 1245677777666554 34679999999
Q ss_pred cCChhhhhhcCeeEEecCcchhHHHhcCcccccchh--hHHHHH
Q 001027 887 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR--FLVTLL 928 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~--~L~~lL 928 (1184)
.||+.|++.|++++++.+.+. .+..||+++.+.+ -+.++.
T Consensus 168 ~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl~~~~~~~ 209 (217)
T 3m1y_A 168 ANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDLALIKPLI 209 (217)
T ss_dssp GGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBGGGGTTC-
T ss_pred HHHHHHHHHCCCeEEECccHH--HHHhcceeecccCHHHHHHHh
Confidence 999999999999999955554 6678999997644 355553
No 31
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.31 E-value=9.5e-07 Score=92.22 Aligned_cols=109 Identities=16% Similarity=0.165 Sum_probs=80.5
Q ss_pred HHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCCcCCCCCc
Q 001027 740 AIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHNSERSSGA 819 (1184)
Q Consensus 740 ~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 819 (1184)
+|+.|+++|+++.++||+....+..++..+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999888731
Q ss_pred CCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc
Q 001027 820 GVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMA 896 (1184)
Q Consensus 820 ~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~A 896 (1184)
++.. .+.|...++.+.+. ....+++|||+.||+.|.+.|
T Consensus 95 ------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~a 136 (188)
T 2r8e_A 95 ------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKV 136 (188)
T ss_dssp ------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTS
T ss_pred ------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHC
Confidence 1111 23455555555432 235799999999999999999
Q ss_pred CeeEEec-CcchhHHHhcCcccccch-------hhHHHHHHHHhHh
Q 001027 897 DVGVGIS-GQEGRQAVMSSDFAMGQF-------RFLVTLLLVHGHW 934 (1184)
Q Consensus 897 dVGI~is-g~e~~qA~~asD~~i~~f-------~~L~~lLl~hGr~ 934 (1184)
++++++. +.+. +...||+++.+. ..+..+|-.+|+|
T Consensus 137 g~~~~~~~~~~~--~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 137 GLSVAVADAHPL--LIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp SEEEECTTSCTT--TGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred CCEEEecCcCHH--HHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 9999883 3333 566799999875 3355555556654
No 32
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.31 E-value=4.9e-06 Score=92.72 Aligned_cols=185 Identities=10% Similarity=0.050 Sum_probs=102.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC----CC-------ceEEEEeCCChHHHHHHHHHHHHh-
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT----SK-------MTQVIINSNSKESCRKSLEDAIAM- 799 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~----~~-------~~~i~i~~~~~~~~~~~~~~~~~~- 799 (1184)
.+-+.+.++|++|++.|+++++.||.....+..+...+++-. .+ .+.+.-..-+.+.....++.....
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 577899999999999999999999999999998887766421 11 122222222344444444333322
Q ss_pred -hcccccCCCC--------C---------------CCcCCCCCc-CCCcEEEEE-cCcchhhhcchHHHHHHHHHhccCC
Q 001027 800 -SKKLKTVPGV--------S---------------HNSERSSGA-GVAQLALII-DGTSLVYILDSELDEQLFQLAGTCS 853 (1184)
Q Consensus 800 -~~~~~~~~~~--------~---------------~~~~~~~~~-~~~~~~lvi-~G~~l~~~l~~~~~~~f~~l~~~~~ 853 (1184)
.....+.... . ..+.-.... .......+. +........ +.+.+.+.. ...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~-~~l~~~~~~---~~~ 194 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCT-PVFIPAWNK---KAH 194 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHT-TTHHHHHTT---TEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHH-HHHHHHhcC---CEE
Confidence 0000000000 0 000000000 011122223 222222111 123333321 111
Q ss_pred ee----EEEecCc--ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 854 VV----LCCRVAP--LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 854 ~v----i~~r~sP--~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
.+ .+....| ..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|..... ..+..||++..+.
T Consensus 195 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~-~~k~~A~~v~~s~ 270 (283)
T 3dao_A 195 LAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQ-EVIAAAKHTCAPY 270 (283)
T ss_dssp EEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCH-HHHHHSSEEECCG
T ss_pred EEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCH-HHHHhcCeECCCC
Confidence 11 1233444 469999998877644 569999999999999999999999943332 2788999998653
No 33
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.27 E-value=1.5e-06 Score=91.42 Aligned_cols=126 Identities=22% Similarity=0.256 Sum_probs=83.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++.|+++.++||+....+..+...+|+.. .+.
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~----~~~------------------------------ 120 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDY----AFA------------------------------ 120 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSE----EEE------------------------------
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCe----EEE------------------------------
Confidence 3577899999999999999999999999888877777776621 000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-cCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-VAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
..+.++...+. .. +.+. +.+..|...+..+.+. ....++++||+
T Consensus 121 -------------~~~~~~~~~~~------------------~~-~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~ 168 (211)
T 1l7m_A 121 -------------NRLIVKDGKLT------------------GD-VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDG 168 (211)
T ss_dssp -------------EEEEEETTEEE------------------EE-EECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred -------------eeeEEECCEEc------------------CC-cccCccCCccHHHHHHHHHHHcCCCHHHEEEEecC
Confidence 00000000000 00 1011 1245777666655543 23569999999
Q ss_pred cCChhhhhhcCeeEEecCcchhHHHhcCcccccc--hhhH
Q 001027 887 ANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ--FRFL 924 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~--f~~L 924 (1184)
.||+.|++.|++++++.+.+. .+..||+++.+ +.-|
T Consensus 169 ~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~~~~~~l 206 (211)
T 1l7m_A 169 ANDISMFKKAGLKIAFCAKPI--LKEKADICIEKRDLREI 206 (211)
T ss_dssp GGGHHHHHHCSEEEEESCCHH--HHTTCSEEECSSCGGGG
T ss_pred hhHHHHHHHCCCEEEECCCHH--HHhhcceeecchhHHHH
Confidence 999999999999999964443 56679999876 5443
No 34
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.26 E-value=3.5e-06 Score=93.99 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=43.2
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcc
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDF 916 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~ 916 (1184)
..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|..... ..+.+||+
T Consensus 208 ~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~-~vk~~A~~ 263 (285)
T 3pgv_A 208 VSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQ-RLKDLHPE 263 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCTT
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCH-HHHHhCCC
Confidence 479999998876644 579999999999999999999999943332 27888985
No 35
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.19 E-value=3.9e-06 Score=88.48 Aligned_cols=134 Identities=17% Similarity=0.229 Sum_probs=87.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+++.++++.|++.|+++.++||.....+..+....|+.... .+.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~------------------------------- 128 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFA------------------------------- 128 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEE-------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEE-------------------------------
Confidence 38899999999999999999999999999999999988874211 000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..+++++.... ..+.....+|..|...+..........++|+||+.||+.
T Consensus 129 ------------~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~ 178 (219)
T 3kd3_A 129 ------------VETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQ 178 (219)
T ss_dssp ------------EEEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHH
T ss_pred ------------eeeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHH
Confidence 00111110000 001122344566766665542225678999999999999
Q ss_pred hhhh--cCeeEEec-CcchhHHHhcCcccccchhhHHHHH
Q 001027 892 MIQM--ADVGVGIS-GQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 892 mL~~--AdVGI~is-g~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
|+++ +.+||+.. +.........||+++.++.-|..+|
T Consensus 179 ~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 179 LYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp HHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred HHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 9965 33555552 2222235677999999988777664
No 36
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.16 E-value=2.8e-05 Score=85.16 Aligned_cols=180 Identities=17% Similarity=0.156 Sum_probs=98.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC---CCc-------eEEEEeCCChHHHHHHHHHHHHhh
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT---SKM-------TQVIINSNSKESCRKSLEDAIAMS 800 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~---~~~-------~~i~i~~~~~~~~~~~~~~~~~~~ 800 (1184)
..+.+.+.++|++|++.|+++.+.||.....+..+..++++-. .+. +.+.-..-+.+.....++......
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~~~~~ 98 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEAHKNG 98 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHHHhCC
Confidence 3567788899999999999999999999999888888877521 111 111122233444444444332221
Q ss_pred cccccCCCCC-CCcC-------------C--CC-C-----cCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE
Q 001027 801 KKLKTVPGVS-HNSE-------------R--SS-G-----AGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC 858 (1184)
Q Consensus 801 ~~~~~~~~~~-~~~~-------------~--~~-~-----~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~ 858 (1184)
.......... .... . .. . .....+.+++.+.. +....+.+.. ..+-+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~~---~~~~~~ 168 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRA-------EEEEPYVRNY---PEFRFV 168 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCH-------HHHHHHHHHC---TTEEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCH-------HHHHHHHHhC---CCeEEE
Confidence 1100000000 0000 0 00 0 00011122222221 1111111111 111122
Q ss_pred ecCc---------ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 859 RVAP---------LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 859 r~sP---------~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
+..| ..|+..++.+.++ ....|+++|||.||.+|++.|++||+|. +.....+..||++..+.
T Consensus 169 ~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 169 RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCG
T ss_pred EeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCC
Confidence 2222 3799888888765 3357999999999999999999999994 22233778899998653
No 37
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.16 E-value=3.3e-06 Score=99.71 Aligned_cols=117 Identities=25% Similarity=0.353 Sum_probs=87.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++||.....+..++..+|+-.--...
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~--------------------------------- 302 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANE--------------------------------- 302 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEEC---------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeee---------------------------------
Confidence 79999999999999999999999999999999999999983210000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEe-----cCcccHHHHHHHHHhc---CCCeEEEE
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCR-----VAPLQKAGIVALVKTR---TSDMTLAI 883 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r-----~sP~qK~~iV~~lk~~---~g~~vl~i 883 (1184)
..+.||. +.++ ..++.|..+++.+.+. ....++||
T Consensus 303 -------------l~~~dg~------------------------~tg~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~v 345 (415)
T 3p96_A 303 -------------LEIVDGT------------------------LTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAV 345 (415)
T ss_dssp -------------EEEETTE------------------------EEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred -------------EEEeCCE------------------------EEeeEccCCCCCcchHHHHHHHHHHcCcChhhEEEE
Confidence 0011221 1111 1256777777766554 23579999
Q ss_pred cCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 884 GDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 884 GDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
|||.||++|++.|++|+++.+.+. ....||+++..
T Consensus 346 GD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~ 380 (415)
T 3p96_A 346 GDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSH 380 (415)
T ss_dssp ECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECS
T ss_pred ECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEcc
Confidence 999999999999999999955554 67789999864
No 38
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.15 E-value=5.2e-06 Score=93.56 Aligned_cols=58 Identities=21% Similarity=0.370 Sum_probs=47.1
Q ss_pred cccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 862 PLQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 862 P~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
+..|+..++.+.++.| ..|+++||+.||++|++.|++||+|..... ..+.+||++..+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~~ 286 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPK-NVKAAANYQAKS 286 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCH-HHHHHCSEECCC
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCH-HHHHhccEEcCC
Confidence 3579999888876543 569999999999999999999999943332 278899999876
No 39
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.14 E-value=4.1e-06 Score=94.98 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=83.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|+++|+++.++||.....+..+...+|+..--...
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~--------------------------------- 225 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNT--------------------------------- 225 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEC---------------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEE---------------------------------
Confidence 48999999999999999999999999999999999999984210000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE-ecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC-RVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~-r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
+.+++..+.-. +.+ -..++.|..+++.+.+. ....++||||+.
T Consensus 226 --------------l~~~dg~~tg~-------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~ 272 (317)
T 4eze_A 226 --------------VEIRDNVLTDN-------------------ITLPIMNAANKKQTLVDLAARLNIATENIIACGDGA 272 (317)
T ss_dssp --------------EEEETTEEEEE-------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSG
T ss_pred --------------EEeeCCeeeee-------------------EecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCH
Confidence 01111000000 000 01235666666655443 335799999999
Q ss_pred CChhhhhhcCeeEEecCcchhHHHhcCccccc
Q 001027 888 NDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 888 NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
||+.|.+.|++|+++.+.+. ....+|.++.
T Consensus 273 ~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~ 302 (317)
T 4eze_A 273 NDLPMLEHAGTGIAWKAKPV--VREKIHHQIN 302 (317)
T ss_dssp GGHHHHHHSSEEEEESCCHH--HHHHCCEEES
T ss_pred HHHHHHHHCCCeEEeCCCHH--HHHhcCeeeC
Confidence 99999999999999955444 5567777764
No 40
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.14 E-value=1.1e-05 Score=80.94 Aligned_cols=106 Identities=15% Similarity=0.227 Sum_probs=77.2
Q ss_pred cCChhHHHHHHHHHHc-CCEEEeecCCeEEEEEcCceeeEE-EeeeecCCCCCceEEEEEecCCCeEEEEecChhhHHHH
Q 001027 571 GESPDEQALVYAAAAY-GFMLIERTSGHIVIDIQGQRQRFN-VLGLHEFDSDRKRMSVILGLPDKTVTLFVKGADTSMFS 648 (1184)
Q Consensus 571 ~~sP~E~Alv~~a~~~-g~~~~~r~~~~i~i~~~~~~~~~~-il~~~~F~s~rkrmSviv~~~~~~~~l~~KGa~~~i~~ 648 (1184)
+++|..+|++++|++. |.....- . + .....+|++.-++..|.+ +|+ -+.+|++..|.+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~~-------------~--~~~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn~~~i~~ 108 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERDV-------------Q--SLHATFVPFTAQSRMSGINI---DNR--MIRKGSVDAIRR 108 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCCH-------------H--HHTCEEEEEETTTTEEEEEE---TTE--EEEEEEHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCcccc-------------c--ccccceeeccccCCCCeEEE---CCE--EEEEeCcHHHHH
Confidence 4799999999999986 6532110 0 0 012357888777677744 453 466899988877
Q ss_pred HHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeec
Q 001027 649 VIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASG 728 (1184)
Q Consensus 649 ~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ 728 (1184)
.+... +-.....+.+.+++++.+|.+++++|. |..++|+++
T Consensus 109 l~~~~-gi~~~~~~~~~~~~la~~G~T~v~VA~--------------------------------------d~~l~GvIa 149 (156)
T 1svj_A 109 HVEAN-GGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRVLGVIA 149 (156)
T ss_dssp HHHHH-TCCCCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEEEEEEE
T ss_pred HHHHc-CCCCcHHHHHHHHHHHhCCCCEEEEEE--------------------------------------CCEEEEEEE
Confidence 76544 333444578889999999999999995 678999999
Q ss_pred ccccCCC
Q 001027 729 IEDKLQQ 735 (1184)
Q Consensus 729 ieD~lq~ 735 (1184)
+.|++|+
T Consensus 150 laD~iK~ 156 (156)
T 1svj_A 150 LKDIVKG 156 (156)
T ss_dssp EEECCCC
T ss_pred EecCCCC
Confidence 9999996
No 41
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.11 E-value=5.1e-06 Score=94.93 Aligned_cols=76 Identities=16% Similarity=0.204 Sum_probs=56.2
Q ss_pred cccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc----CeeEEecCcchhHHHhcCcccccc--h----hhHHHHHHH
Q 001027 862 PLQKAGIVALVKTR-TSDMTLAIGDGANDVSMIQMA----DVGVGISGQEGRQAVMSSDFAMGQ--F----RFLVTLLLV 930 (1184)
Q Consensus 862 P~qK~~iV~~lk~~-~g~~vl~iGDG~NDv~mL~~A----dVGI~isg~e~~qA~~asD~~i~~--f----~~L~~lLl~ 930 (1184)
+.+|+..++.++.. ..++|+++|||.||++|++.| ++||+| .... .++..||+++.+ . ..|.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 56799988876541 124599999999999999999 999999 4332 377899999865 2 335555 67
Q ss_pred HhHhHHHHHHH
Q 001027 931 HGHWNYQRMGY 941 (1184)
Q Consensus 931 hGr~~~~ri~~ 941 (1184)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888777 5444
No 42
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.09 E-value=1.4e-05 Score=88.00 Aligned_cols=59 Identities=24% Similarity=0.359 Sum_probs=47.1
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchh
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
..|+..++.+.++ ....|+++||+.||.+|++.|++||+|.... .+.+.+||++..+..
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~-~~~k~~A~~v~~~~~ 260 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSH-QQLKDIATSICEDIF 260 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSC-HHHHHHCSEEECCGG
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCcc-HHHHHhhhheeCCCc
Confidence 4799888887665 3467999999999999999999999994333 237888999987643
No 43
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.07 E-value=3.7e-05 Score=80.73 Aligned_cols=124 Identities=22% Similarity=0.147 Sum_probs=89.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++. +++.++|+.....+..+...+|+..--..
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~---------------------------------- 113 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH---------------------------------- 113 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE----------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc----------------------------------
Confidence 6789999999999999 99999999999999999999887420000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE--ecCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC--RVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~--r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
.++..+ ... ... .-.|..|...++.+.. .+..+++|||+.||
T Consensus 114 -------------~~~~~~-~~~---------------------~~~~~~p~p~~~~~~l~~l~~-~~~~~~~iGD~~~D 157 (206)
T 1rku_A 114 -------------KLEIDD-SDR---------------------VVGYQLRQKDPKRQSVIAFKS-LYYRVIAAGDSYND 157 (206)
T ss_dssp -------------EEEECT-TSC---------------------EEEEECCSSSHHHHHHHHHHH-TTCEEEEEECSSTT
T ss_pred -------------eeEEcC-Cce---------------------EEeeecCCCchHHHHHHHHHh-cCCEEEEEeCChhh
Confidence 011110 000 111 2468889999998877 67789999999999
Q ss_pred hhhhhhcCeeEEecCcchhHHHhcCccc-ccchhhHHHH
Q 001027 890 VSMIQMADVGVGISGQEGRQAVMSSDFA-MGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~e~~qA~~asD~~-i~~f~~L~~l 927 (1184)
+.|.+.|++++.+.+.+.. ...+.+++ +.++.-+..+
T Consensus 158 i~~a~~aG~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 158 TTMLSEAHAGILFHAPENV-IREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp HHHHHHSSEEEEESCCHHH-HHHCTTSCEECSHHHHHHH
T ss_pred HHHHHhcCccEEECCcHHH-HHHHhhhccccchHHHHHH
Confidence 9999999999988544332 22345664 6666665554
No 44
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.05 E-value=3.8e-05 Score=84.45 Aligned_cols=58 Identities=26% Similarity=0.408 Sum_probs=47.2
Q ss_pred ccHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 863 LQKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
..|+..++.+.++.| ..|+++||+.||.+|++.|++||+|..... .++.+||++..+.
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~-~~k~~Ad~v~~~~ 253 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASE-KVQSVADFVTDTV 253 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTCSEECCCT
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcH-HHHHhcCEeeCCC
Confidence 589999988877643 569999999999999999999999943332 3788999998763
No 45
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.04 E-value=7e-06 Score=86.28 Aligned_cols=129 Identities=18% Similarity=0.163 Sum_probs=87.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+..--..
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 115 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--------------------------------- 115 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG---------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc---------------------------------
Confidence 36779999999999999999999999999988888888887421000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
..++.+. . . ..+-|...++.+.+. ....+++|||+.
T Consensus 116 --------------~~i~~~~------------------------~-~--~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~ 154 (205)
T 3m9l_A 116 --------------ADVLGRD------------------------E-A--PPKPHPGGLLKLAEAWDVSPSRMVMVGDYR 154 (205)
T ss_dssp --------------GGEECTT------------------------T-S--CCTTSSHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred --------------ceEEeCC------------------------C-C--CCCCCHHHHHHHHHHcCCCHHHEEEECCCH
Confidence 0000000 0 0 011122233333222 336799999999
Q ss_pred CChhhhhhcCe-eEEec-CcchhHHHhcCcccccchhhHHHHHHHHhHhH
Q 001027 888 NDVSMIQMADV-GVGIS-GQEGRQAVMSSDFAMGQFRFLVTLLLVHGHWN 935 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~is-g~e~~qA~~asD~~i~~f~~L~~lLl~hGr~~ 935 (1184)
||+.|.+.|++ +|++. +.+. ....||+++.++.-|..++=.+++..
T Consensus 155 ~Di~~a~~aG~~~i~v~~~~~~--~~~~ad~v~~~~~el~~~~~~~~~~~ 202 (205)
T 3m9l_A 155 FDLDCGRAAGTRTVLVNLPDNP--WPELTDWHARDCAQLRDLLSAEGHHH 202 (205)
T ss_dssp HHHHHHHHHTCEEEECSSSSCS--CGGGCSEECSSHHHHHHHHHHTTCC-
T ss_pred HHHHHHHHcCCEEEEEeCCCCc--ccccCCEEeCCHHHHHHHHHhccccc
Confidence 99999999999 99993 3332 45679999999888877754454443
No 46
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.03 E-value=2e-05 Score=87.76 Aligned_cols=61 Identities=25% Similarity=0.338 Sum_probs=47.5
Q ss_pred ecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 859 RVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.+.|. .|+..++.+.+. ....++++||+.||.+|++.|++||++..... ..+..||+++.+
T Consensus 191 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 191 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 44554 899999888765 23579999999999999999999999943322 256679998865
No 47
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=98.03 E-value=6.9e-06 Score=87.68 Aligned_cols=130 Identities=18% Similarity=0.244 Sum_probs=87.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|+++|++++++||.....+..+...+|+...+ .+..
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~----------------------------- 133 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFAN----------------------------- 133 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEE-----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEee-----------------------------
Confidence 378999999999999999999999999999999999999984210 0000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEE-ec-----CcccHHHHHHHHHhcCC-CeEEEE
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCC-RV-----APLQKAGIVALVKTRTS-DMTLAI 883 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~-r~-----sP~qK~~iV~~lk~~~g-~~vl~i 883 (1184)
.+..+. ..++.+ .. .+..|..+++.+.+..| ..+++|
T Consensus 134 --------------~~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~v 177 (225)
T 1nnl_A 134 --------------RLKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMI 177 (225)
T ss_dssp --------------CEEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEE
T ss_pred --------------eEEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEE
Confidence 000000 000111 11 13467777666554333 679999
Q ss_pred cCCcCChhhhhhcCeeEEecCcc-hhHHHhcCcccccchhhHHHH
Q 001027 884 GDGANDVSMIQMADVGVGISGQE-GRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 884 GDG~NDv~mL~~AdVGI~isg~e-~~qA~~asD~~i~~f~~L~~l 927 (1184)
||+.||+.|.++|+++|++.... .......+|+++.++.-+..+
T Consensus 178 GDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 178 GDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp ESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred eCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 99999999999999988884321 112345689999887765443
No 48
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.03 E-value=9.2e-06 Score=87.19 Aligned_cols=122 Identities=24% Similarity=0.273 Sum_probs=82.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
.++.+|+.+.++.|++.|+++.++|+...+.+..+....|+...-
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----------------------------------- 147 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRL----------------------------------- 147 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTC-----------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhe-----------------------------------
Confidence 467899999999999999999999999999888888888874211
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
..++.+.... ..+-|..+++.+.+. ....+++|||+.
T Consensus 148 --------------~~~~~~~~~~--------------------------~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 187 (237)
T 4ex6_A 148 --------------TVIAGDDSVE--------------------------RGKPHPDMALHVARGLGIPPERCVVIGDGV 187 (237)
T ss_dssp --------------SEEECTTTSS--------------------------SCTTSSHHHHHHHHHHTCCGGGEEEEESSH
T ss_pred --------------eeEEeCCCCC--------------------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCH
Confidence 0111111100 011222333322222 446799999999
Q ss_pred CChhhhhhcCe---eEEecCcchhHHH-hcCcccccchhhHHHH
Q 001027 888 NDVSMIQMADV---GVGISGQEGRQAV-MSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 888 NDv~mL~~AdV---GI~isg~e~~qA~-~asD~~i~~f~~L~~l 927 (1184)
||+.|.++|++ ||++......... ..+|+++.++.-|..+
T Consensus 188 ~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 188 PDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp HHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 99999999999 6655322211133 3699999998887776
No 49
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=97.95 E-value=1.9e-05 Score=79.77 Aligned_cols=104 Identities=14% Similarity=0.133 Sum_probs=76.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCCC
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSHN 812 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 812 (1184)
+.+++.++|+.|+++|+++.++||.....+..+...+|+..
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------------------------------------- 77 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------------------------------------- 77 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------------------
Confidence 34667899999999999999999999999999999888731
Q ss_pred cCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhc--CCCeEEEEcCCcCC
Q 001027 813 SERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDGAND 889 (1184)
Q Consensus 813 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l-k~~--~g~~vl~iGDG~ND 889 (1184)
.+.. ++.|...++.+ ++. ....+++|||+.||
T Consensus 78 -------------------------------------------~~~~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~D 112 (162)
T 2p9j_A 78 -------------------------------------------IYTG--SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVD 112 (162)
T ss_dssp -------------------------------------------EEEC--C--CHHHHHHHHHHTTCCGGGEEEEECSGGG
T ss_pred -------------------------------------------hccC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 22233433333 221 34579999999999
Q ss_pred hhhhhhcCeeEEec-CcchhHHHhcCcccccchh
Q 001027 890 VSMIQMADVGVGIS-GQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 890 v~mL~~AdVGI~is-g~e~~qA~~asD~~i~~f~ 922 (1184)
+.|.+.|++++.+. +.+. ....||+++.+..
T Consensus 113 i~~a~~ag~~~~~~~~~~~--~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 113 IEVMKKVGFPVAVRNAVEE--VRKVAVYITQRNG 144 (162)
T ss_dssp HHHHHHSSEEEECTTSCHH--HHHHCSEECSSCS
T ss_pred HHHHHHCCCeEEecCccHH--HHhhCCEEecCCC
Confidence 99999999998873 4333 5667999987643
No 50
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.94 E-value=2.4e-05 Score=83.78 Aligned_cols=109 Identities=13% Similarity=0.018 Sum_probs=76.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+|+.++++.|++.|+++.++||.....+..++..+|+.. .+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~----~~~------------------------------- 136 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH----LIA------------------------------- 136 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE----EEE-------------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----EEE-------------------------------
Confidence 589999999999999999999999999999999999999831 110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEE-EecCcccHHHHHHHHHhcCC------CeEEEEc
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLC-CRVAPLQKAGIVALVKTRTS------DMTLAIG 884 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~-~r~sP~qK~~iV~~lk~~~g------~~vl~iG 884 (1184)
......+|..-. -+. ....+..|...++.+.+..| ..++++|
T Consensus 137 -----------~~~~~~~~~~~g--------------------~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vG 185 (232)
T 3fvv_A 137 -----------TDPEYRDGRYTG--------------------RIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYS 185 (232)
T ss_dssp -----------CEEEEETTEEEE--------------------EEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEE
T ss_pred -----------cceEEECCEEee--------------------eecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEe
Confidence 000001110000 000 01224567766655543344 5799999
Q ss_pred CCcCChhhhhhcCeeEEecCcc
Q 001027 885 DGANDVSMIQMADVGVGISGQE 906 (1184)
Q Consensus 885 DG~NDv~mL~~AdVGI~isg~e 906 (1184)
|+.||++|++.|++++++...+
T Consensus 186 Ds~~D~~~~~~ag~~~~~~~~~ 207 (232)
T 3fvv_A 186 DSVNDVPLLEAVTRPIAANPSP 207 (232)
T ss_dssp CCGGGHHHHHHSSEEEEESCCH
T ss_pred CCHhhHHHHHhCCCeEEECcCH
Confidence 9999999999999999986544
No 51
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=97.91 E-value=3e-05 Score=82.40 Aligned_cols=120 Identities=18% Similarity=0.191 Sum_probs=85.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 4678999999999999999999999999888888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecC--cccHHHHHHHHHhc---CCCeEEEEcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA--PLQKAGIVALVKTR---TSDMTLAIGD 885 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~---~g~~vl~iGD 885 (1184)
.++++... .+-|...++.+.+. ....+++|||
T Consensus 131 -------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD 167 (226)
T 3mc1_A 131 -------------------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGD 167 (226)
T ss_dssp -------------------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEES
T ss_pred -------------------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECC
Confidence 11222221 23455555544433 3357999999
Q ss_pred CcCChhhhhhcCe---eEEecCcchhHH--HhcCcccccchhhHHHHH
Q 001027 886 GANDVSMIQMADV---GVGISGQEGRQA--VMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 886 G~NDv~mL~~AdV---GI~isg~e~~qA--~~asD~~i~~f~~L~~lL 928 (1184)
+.||+.|.+.|++ +|++ |....+. +..+|+++.++.-|..+|
T Consensus 168 ~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 168 REYDVIGALKNNLPSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp SHHHHHHHHTTTCCEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 9999999999999 4443 3222112 478999999988887774
No 52
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=97.89 E-value=1.1e-05 Score=93.59 Aligned_cols=41 Identities=10% Similarity=0.174 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.++.+++.+.|+.|+++|++|||+||...+.+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35799999999999999999999999999999999999987
No 53
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=97.86 E-value=2.8e-05 Score=82.24 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=78.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 139 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA---------------------------------- 139 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcE----------------------------------
Confidence 4579999999999999999999999988877777777666321100
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhc---CCCeEEEEcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
+ +++...+..| ...++.+.+. ....+++|||+
T Consensus 140 ---------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~ 176 (226)
T 1te2_A 140 ---------------L----------------------------ASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDS 176 (226)
T ss_dssp ---------------E----------------------------EECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESS
T ss_pred ---------------E----------------------------EeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCC
Confidence 0 1111111111 2333322222 44679999999
Q ss_pred cCChhhhhhcCeeEEecCcch---hHHHhcCcccccchhhHHH
Q 001027 887 ANDVSMIQMADVGVGISGQEG---RQAVMSSDFAMGQFRFLVT 926 (1184)
Q Consensus 887 ~NDv~mL~~AdVGI~isg~e~---~qA~~asD~~i~~f~~L~~ 926 (1184)
.||+.|++.|++++.+-...+ ......||+++.++.-+..
T Consensus 177 ~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 177 VNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTA 219 (226)
T ss_dssp HHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCH
T ss_pred HHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhH
Confidence 999999999999987721111 1135679999988766543
No 54
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=97.83 E-value=0.00022 Score=79.41 Aligned_cols=58 Identities=22% Similarity=0.251 Sum_probs=45.7
Q ss_pred cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchh
Q 001027 864 QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 864 qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
.|+..++.+.+..| ..++++||+.||.+|++.|++||+|..... ..+..||+++.+..
T Consensus 216 ~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 216 SKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 79998888876533 479999999999999999999999943322 25667999886543
No 55
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.79 E-value=2.8e-05 Score=82.83 Aligned_cols=123 Identities=20% Similarity=0.146 Sum_probs=81.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.+.++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 135 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI---------------------------------- 135 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh----------------------------------
Confidence 4578999999999999999999999999988888888887743110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
.++.+.... ..+-|...++.+.+. ....+++|||+.
T Consensus 136 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 136 ---------------NIVTRDDVS--------------------------YGKPDPDLFLAAAKKIGAPIDECLVIGDAI 174 (233)
T ss_dssp ---------------CEECGGGSS--------------------------CCTTSTHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred ---------------eeeccccCC--------------------------CCCCChHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 011111000 012223333333322 335799999999
Q ss_pred CChhhhhhcCe-eEEe-cC-cchhHHHh-cCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADV-GVGI-SG-QEGRQAVM-SSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~i-sg-~e~~qA~~-asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++ +|++ .| ....+... .+|+++.++.-|..+|
T Consensus 175 ~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 175 WDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 99999999999 3455 23 22222233 3899999988877764
No 56
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=97.78 E-value=5.1e-05 Score=82.22 Aligned_cols=56 Identities=13% Similarity=0.238 Sum_probs=46.7
Q ss_pred EecCcc--cHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhc--CeeEEecCcchhHHHhcCcccccc
Q 001027 858 CRVAPL--QKAGIVALVKTRTSDMTLAIGDGANDVSMIQMA--DVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 858 ~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~NDv~mL~~A--dVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..+.|. .|+..++.+.+..| |+++|||.||.+||+.| ++||+|... +..||+++.+
T Consensus 152 lei~~~~~~Kg~al~~l~~~~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 152 IELRVPGVNKGSAIRSVRGERP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp EEEECTTCCHHHHHHHHHTTSC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred EEEEcCCCCHHHHHHHHHhhCC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 345554 89999999988666 99999999999999999 999999543 4578988765
No 57
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.77 E-value=2.5e-05 Score=84.64 Aligned_cols=42 Identities=24% Similarity=0.258 Sum_probs=38.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++.+|+.++++.|++.|++++++|+...+.+..+...+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999898999888874
No 58
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.77 E-value=5e-05 Score=81.67 Aligned_cols=121 Identities=15% Similarity=0.180 Sum_probs=84.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|++++++|+.....+..+...+|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 4678999999999999999999999999888888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecC--cccHHHHHHHHHhc---C-CCeEEEEc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVA--PLQKAGIVALVKTR---T-SDMTLAIG 884 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~s--P~qK~~iV~~lk~~---~-g~~vl~iG 884 (1184)
.++++... ++-|..+++.+.+. . ...+++||
T Consensus 155 -------------------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vG 191 (240)
T 3sd7_A 155 -------------------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVG 191 (240)
T ss_dssp -------------------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred -------------------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEC
Confidence 11222211 23455555544433 4 56799999
Q ss_pred CCcCChhhhhhcCee-EEec-CcchhH--HHhcCcccccchhhHHHHH
Q 001027 885 DGANDVSMIQMADVG-VGIS-GQEGRQ--AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 885 DG~NDv~mL~~AdVG-I~is-g~e~~q--A~~asD~~i~~f~~L~~lL 928 (1184)
|+.||+.|.+.|++. |++. |....+ ....+|+++.++.-|..+|
T Consensus 192 D~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 192 DRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999999999983 2442 322211 2467999999988877664
No 59
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=97.76 E-value=5.1e-05 Score=85.34 Aligned_cols=60 Identities=18% Similarity=0.283 Sum_probs=47.1
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCccccc
Q 001027 859 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMG 919 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~ 919 (1184)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++..... ..+..||+++.
T Consensus 217 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~ 281 (301)
T 2b30_A 217 EVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLP 281 (301)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECS
T ss_pred EecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEc
Confidence 34444 89999998876533 479999999999999999999999953322 26678999887
No 60
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.76 E-value=5.1e-05 Score=79.45 Aligned_cols=124 Identities=17% Similarity=0.167 Sum_probs=81.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.+.++.|++.|+++.++|+...+.+..+....|+...-.
T Consensus 83 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~---------------------------------- 128 (216)
T 2pib_A 83 LKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD---------------------------------- 128 (216)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcC----------------------------------
Confidence 3678999999999999999999999999999988888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhcCCCeEEEEcCCcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGAN 888 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~N 888 (1184)
.++.+.... ...|+ --..+.+.+.- ....+++|||+.|
T Consensus 129 ---------------~~~~~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~i~iGD~~~ 168 (216)
T 2pib_A 129 ---------------VMVFGDQVK------------------------NGKPDPEIYLLVLERLNV-VPEKVVVFEDSKS 168 (216)
T ss_dssp ---------------EEECGGGSS------------------------SCTTSTHHHHHHHHHHTC-CGGGEEEEECSHH
T ss_pred ---------------EEeecccCC------------------------CCCcCcHHHHHHHHHcCC-CCceEEEEeCcHH
Confidence 111111000 01111 11122222222 4467999999999
Q ss_pred ChhhhhhcCee-E--Ee-cCcchhHHHhcCcccccchhhHHHHH
Q 001027 889 DVSMIQMADVG-V--GI-SGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 889 Dv~mL~~AdVG-I--~i-sg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
|+.|.+.|+++ | ++ .|....+....+|+++.++.-|..+|
T Consensus 169 Di~~a~~aG~~~i~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l 212 (216)
T 2pib_A 169 GVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVL 212 (216)
T ss_dssp HHHHHHHTTCCEEEEECCSSSCCHHHHHTTCSEEECGGGHHHHH
T ss_pred HHHHHHHcCCcEEehccCCCCCchhhcchhheeeCCHHHHHHHH
Confidence 99999999993 3 33 23222223368999999988877663
No 61
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=97.76 E-value=0.00021 Score=76.90 Aligned_cols=173 Identities=15% Similarity=0.136 Sum_probs=95.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeC------------CChHHHHHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINS------------NSKESCRKSLEDAIA 798 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~------------~~~~~~~~~~~~~~~ 798 (1184)
..+.+.+.++|++|+++|+++.++||.....+..+...+|+-. ..+..++ ...+...+.++....
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~ 95 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---PVVAEDGGAISYKKKRIFLASMDEEWILWNEIRK 95 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---eEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHH
Confidence 4577888999999999999999999999999999988888632 1111111 111223333322210
Q ss_pred hhcccccCCCCCCCcCCCCCcCCCcEEEEEc-CcchhhhcchHHHHHHHHHhccCCee---EEEecCc--ccHHHHHHHH
Q 001027 799 MSKKLKTVPGVSHNSERSSGAGVAQLALIID-GTSLVYILDSELDEQLFQLAGTCSVV---LCCRVAP--LQKAGIVALV 872 (1184)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~-G~~l~~~l~~~~~~~f~~l~~~~~~v---i~~r~sP--~qK~~iV~~l 872 (1184)
........ ...... .... .+.+ +.. .+.....+..+....+.+ .+....| ..|...++.+
T Consensus 96 ~~~~~~~~-~~~~~~-------~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 96 RFPNARTS-YTMPDR-------RAGL-VIMRETIN-----VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp HCTTCCBC-TTGGGC-------SSCE-EECTTTSC-----HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred hCCCceEE-ecCCCc-------eeeE-EEECCCCC-----HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 11000000 000000 0011 1122 111 111222221121122222 1123333 4798888887
Q ss_pred Hhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 873 KTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 873 k~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
.+. ....++++||+.||.+|++.|++|+++..... ..+..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~ 212 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKE 212 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSC
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCC
Confidence 654 23579999999999999999999999843322 2566899998663
No 62
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.75 E-value=3.8e-05 Score=81.89 Aligned_cols=125 Identities=20% Similarity=0.231 Sum_probs=81.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|++.|+++.++|+.....+..+...+|+...-
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f----------------------------------- 126 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF----------------------------------- 126 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC-----------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh-----------------------------------
Confidence 467899999999999999999999999988888888888874210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDV 890 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv 890 (1184)
..++.+.... ...-.|+--..+.+.+.- ....+++|||+.||+
T Consensus 127 --------------~~i~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~vGD~~~Di 169 (222)
T 2nyv_A 127 --------------DLIVGGDTFG----------------------EKKPSPTPVLKTLEILGE-EPEKALIVGDTDADI 169 (222)
T ss_dssp --------------SEEECTTSSC----------------------TTCCTTHHHHHHHHHHTC-CGGGEEEEESSHHHH
T ss_pred --------------eEEEecCcCC----------------------CCCCChHHHHHHHHHhCC-CchhEEEECCCHHHH
Confidence 0111111100 000011111222233322 446799999999999
Q ss_pred hhhhhcCee-EEec-CcchhHHHhcCcccccchhhHHHHH
Q 001027 891 SMIQMADVG-VGIS-GQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 891 ~mL~~AdVG-I~is-g~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
.|.+.|+++ |++. |....+. ..+|+++.++.-+..+|
T Consensus 170 ~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 170 EAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp HHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred HHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 999999988 6763 3211112 56899998887776653
No 63
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=97.73 E-value=8.8e-05 Score=80.86 Aligned_cols=58 Identities=17% Similarity=0.125 Sum_probs=44.5
Q ss_pred ccHHHHHHHHHhc----CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 863 LQKAGIVALVKTR----TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 863 ~qK~~iV~~lk~~----~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+..++.+.+. ....|+++|||.||.+|++.|++||+|........+..||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEecc
Confidence 5799999888765 335799999999999999999999999443311144568887754
No 64
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=97.72 E-value=0.00013 Score=80.47 Aligned_cols=59 Identities=24% Similarity=0.310 Sum_probs=46.6
Q ss_pred cccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccch
Q 001027 862 PLQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQF 921 (1184)
Q Consensus 862 P~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f 921 (1184)
...|...++.+.+.. ...++++||+.||.+|++.|++||++..... ..+..||+++.+.
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~ 250 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDN 250 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCG
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCC
Confidence 348999998887653 3579999999999999999999999943322 2667899998653
No 65
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=97.71 E-value=0.0001 Score=81.22 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=47.1
Q ss_pred ecCcc--cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 859 RVAPL--QKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
...|. .|+..++.+.+. ....++++||+.||.+|++.|++||++..... ..+..||+++.+
T Consensus 183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~ 248 (268)
T 1nf2_A 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLT 248 (268)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCC
T ss_pred EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEcc
Confidence 44554 899998888764 23579999999999999999999999943322 256679998865
No 66
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.71 E-value=4.4e-05 Score=79.21 Aligned_cols=117 Identities=16% Similarity=0.160 Sum_probs=75.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-.+.+++.++++.|++.|++++++|++...... .....|+...
T Consensus 84 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~------------------------------------ 126 (207)
T 2go7_A 84 VVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESY------------------------------------ 126 (207)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGG------------------------------------
T ss_pred ceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhh------------------------------------
Confidence 356899999999999999999999999887766 6666665210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhcCCCeEEEEcCCcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGAN 888 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~N 888 (1184)
+..++.+.... ...|. --..+.+.+.- ....+++|||+.|
T Consensus 127 -------------f~~~~~~~~~~------------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iGD~~n 168 (207)
T 2go7_A 127 -------------FTEILTSQSGF------------------------VRKPSPEAATYLLDKYQL-NSDNTYYIGDRTL 168 (207)
T ss_dssp -------------EEEEECGGGCC------------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEESSHH
T ss_pred -------------eeeEEecCcCC------------------------CCCCCcHHHHHHHHHhCC-CcccEEEECCCHH
Confidence 11111111000 00111 11123333322 4467999999999
Q ss_pred ChhhhhhcCee-EEecCcchhHHHhcCcccccchhhHHHH
Q 001027 889 DVSMIQMADVG-VGISGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 889 Dv~mL~~AdVG-I~isg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
|+.|++.|+++ |++.... . .+|+++.++.-+..+
T Consensus 169 Di~~~~~aG~~~i~~~~~~--~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 169 DVEFAQNSGIQSINFLEST--Y---EGNHRIQALADISRI 203 (207)
T ss_dssp HHHHHHHHTCEEEESSCCS--C---TTEEECSSTTHHHHH
T ss_pred HHHHHHHCCCeEEEEecCC--C---CCCEEeCCHHHHHHH
Confidence 99999999998 6773222 1 689999887766554
No 67
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.67 E-value=0.00011 Score=78.26 Aligned_cols=116 Identities=13% Similarity=0.123 Sum_probs=78.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-.+.+++.++++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~---------------------------------- 147 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD---------------------------------- 147 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----------------------------------
Confidence 3578999999999999999999999999988888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH------HHHHHHHHhcCCC-eEEEE
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK------AGIVALVKTRTSD-MTLAI 883 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK------~~iV~~lk~~~g~-~vl~i 883 (1184)
.++++...+..| ..+.+.+.- ... .+++|
T Consensus 148 -------------------------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi-~~~~~~v~v 183 (231)
T 3kzx_A 148 -------------------------------------------SIIGSGDTGTIKPSPEPVLAALTNINI-EPSKEVFFI 183 (231)
T ss_dssp -------------------------------------------EEEEETSSSCCTTSSHHHHHHHHHHTC-CCSTTEEEE
T ss_pred -------------------------------------------eEEcccccCCCCCChHHHHHHHHHcCC-CcccCEEEE
Confidence 111221111112 122233322 344 79999
Q ss_pred cCCcCChhhhhhcCe-eEEecCcchhHHHhcCcccccchhhHHHHH
Q 001027 884 GDGANDVSMIQMADV-GVGISGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 884 GDG~NDv~mL~~AdV-GI~isg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.||+.|.++|++ +|.+...+. ..+|+++.++.-|..+|
T Consensus 184 GD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 184 GDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp ESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHHH
Confidence 999999999999997 556633222 36789999988877664
No 68
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.65 E-value=7.2e-05 Score=79.74 Aligned_cols=41 Identities=20% Similarity=0.228 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~a-GIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.+.++.|++. |+++.++|+.....+..+....|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5779999999999999 9999999999988888887777764
No 69
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.65 E-value=6.7e-05 Score=79.16 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.+.+++.+.++.|++.|++++++|+.....+..+....|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 44699999999999999999999999988887777777763
No 70
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.61 E-value=8.2e-05 Score=79.42 Aligned_cols=117 Identities=21% Similarity=0.196 Sum_probs=71.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++|+... +..+...+|+...-
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f------------------------------------ 133 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDF------------------------------------ 133 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTC------------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhc------------------------------------
Confidence 4789999999999999999999999744 56666677763211
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGANDVS 891 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~NDv~ 891 (1184)
..++.+... -...-.|.-=..+.+.+.- ....+++|||+.||+.
T Consensus 134 -------------~~i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vGDs~~Di~ 177 (233)
T 3nas_A 134 -------------HAIVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIEDAEAGIS 177 (233)
T ss_dssp -------------SEECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEECSHHHHH
T ss_pred -------------CEEeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEeCCHHHHH
Confidence 011111100 0000111111223333322 4467999999999999
Q ss_pred hhhhcCeeEEecCcchhHHHhcCcccccchhhH
Q 001027 892 MIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 892 mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
|.+.|++++.+.+... ....||+++.++.-+
T Consensus 178 ~a~~aG~~~~~~~~~~--~~~~ad~v~~s~~el 208 (233)
T 3nas_A 178 AIKSAGMFAVGVGQGQ--PMLGADLVVRQTSDL 208 (233)
T ss_dssp HHHHTTCEEEECC---------CSEECSSGGGC
T ss_pred HHHHcCCEEEEECCcc--ccccCCEEeCChHhC
Confidence 9999999997744332 233899999886654
No 71
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.61 E-value=0.00012 Score=78.86 Aligned_cols=137 Identities=12% Similarity=0.157 Sum_probs=87.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.++++.|+++|+++.++|+.....+..+.. ||... ..++.-+..
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~-------------------------- 126 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHAS-------------------------- 126 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeE--------------------------
Confidence 3789999999999999999999999999888877776 66432 222211100
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhc-chHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYIL-DSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l-~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
..++.+.-.. .+ ..-.+.+.....|..+++.+.. ....+++|||+.||
T Consensus 127 -----------------~~~~~~~~~~~kp-------------~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~vGDs~~D 175 (236)
T 2fea_A 127 -----------------FDNDYIHIDWPHS-------------CKGTCSNQCGCCKPSVIHELSE-PNQYIIMIGDSVTD 175 (236)
T ss_dssp -----------------CSSSBCEEECTTC-------------CCTTCCSCCSSCHHHHHHHHCC-TTCEEEEEECCGGG
T ss_pred -----------------EcCCceEEecCCC-------------CccccccccCCcHHHHHHHHhc-cCCeEEEEeCChHH
Confidence 0000000000 00 0000111125679888888865 66789999999999
Q ss_pred hhhhhhcCeeEEecCcchhHHHh--cCcccccchhhHHHHH
Q 001027 890 VSMIQMADVGVGISGQEGRQAVM--SSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 890 v~mL~~AdVGI~isg~e~~qA~~--asD~~i~~f~~L~~lL 928 (1184)
+.|.+.|++.+...+.. ..... .+|+++.++.-+..+|
T Consensus 176 i~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 176 VEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHHH
Confidence 99999999988543221 11222 2789998888776653
No 72
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=97.60 E-value=0.00023 Score=77.94 Aligned_cols=64 Identities=20% Similarity=0.346 Sum_probs=48.9
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhh--HHHH
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRF--LVTL 927 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~--L~~l 927 (1184)
..|...++.+.++ ....++++||+.||+.|++.|++|+++..... ..+..||+++.+..- +...
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~dGv~~~ 254 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDEDGISKA 254 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGGTHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCchhhHHHH
Confidence 4888888877654 33579999999999999999999999943322 356789999877655 5444
No 73
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=97.59 E-value=0.00016 Score=79.19 Aligned_cols=54 Identities=19% Similarity=0.278 Sum_probs=44.1
Q ss_pred ccHHHHHHHHHhcCC-----CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccc
Q 001027 863 LQKAGIVALVKTRTS-----DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~g-----~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~ 920 (1184)
..|+..++.+.+..| ..++++||+.||.+|++.|++||+|..... . +++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~---~-~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP---P-EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC---C-TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh---c-CCcEEeCC
Confidence 689999998877644 679999999999999999999999955444 2 67777654
No 74
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.58 E-value=0.00016 Score=76.62 Aligned_cols=116 Identities=15% Similarity=0.043 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 732 KLQQGVPEAIESLRAAG-IKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aG-Ikv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
++.+++.+.++.|++.| +++.++|+.....+..+...+|+...-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f----------------------------------- 149 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF----------------------------------- 149 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-----------------------------------
Confidence 67899999999999999 999999998888877777777763210
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~ 887 (1184)
.. +++...| |...++.+.+. ....+++|||+.
T Consensus 150 ------------------------------------------~~-~~~~~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~ 184 (234)
T 3ddh_A 150 ------------------------------------------DH-IEVMSDK--TEKEYLRLLSILQIAPSELLMVGNSF 184 (234)
T ss_dssp ------------------------------------------SE-EEEESCC--SHHHHHHHHHHHTCCGGGEEEEESCC
T ss_pred ------------------------------------------he-eeecCCC--CHHHHHHHHHHhCCCcceEEEECCCc
Confidence 01 2233333 55555544433 346799999996
Q ss_pred -CChhhhhhcCeeEEec--C----cchhHHHh-cCcccccchhhHHHH
Q 001027 888 -NDVSMIQMADVGVGIS--G----QEGRQAVM-SSDFAMGQFRFLVTL 927 (1184)
Q Consensus 888 -NDv~mL~~AdVGI~is--g----~e~~qA~~-asD~~i~~f~~L~~l 927 (1184)
||+.|.+.|++++.+- | ........ .+|+++.++.-|..+
T Consensus 185 ~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 185 KSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp CCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred HHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 9999999999988652 2 22111123 349999887776654
No 75
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.57 E-value=8.2e-05 Score=79.07 Aligned_cols=120 Identities=18% Similarity=0.124 Sum_probs=81.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.+.++.|++.|+++.++|+...+.+..+...+|+...-.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 4678999999999999999999999999888888888887742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCc--ccHHHHHHHHHhc---CCCeEEEEcC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAP--LQKAGIVALVKTR---TSDMTLAIGD 885 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP--~qK~~iV~~lk~~---~g~~vl~iGD 885 (1184)
.++. +...+ +-|...++.+.+. ....+++|||
T Consensus 141 ---------------~~~~----------------------------~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD 177 (230)
T 3um9_A 141 ---------------HLIS----------------------------VDEVRLFKPHQKVYELAMDTLHLGESEILFVSC 177 (230)
T ss_dssp ---------------EEEE----------------------------GGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred ---------------eeEe----------------------------hhhcccCCCChHHHHHHHHHhCCCcccEEEEeC
Confidence 0111 11111 1223333333222 3467999999
Q ss_pred CcCChhhhhhcCeeEEe--cCcc-hhHHHhcCcccccchhhHHHH
Q 001027 886 GANDVSMIQMADVGVGI--SGQE-GRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 886 G~NDv~mL~~AdVGI~i--sg~e-~~qA~~asD~~i~~f~~L~~l 927 (1184)
+.||+.|.++|++++.+ .|.. .......+|+++.++.-|..+
T Consensus 178 ~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 178 NSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 99999999999999866 2211 111235789999988776655
No 76
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.54 E-value=6e-05 Score=78.76 Aligned_cols=120 Identities=11% Similarity=0.127 Sum_probs=79.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.+.++.|++.|++++++|+.....+..+....|+...-.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 133 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD----------------------------------- 133 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee-----------------------------------
Confidence 578999999999999999999999999998888888888743111
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCccc--HHHHHHHHHhcCCCeEEEEcCCcCC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQ--KAGIVALVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~q--K~~iV~~lk~~~g~~vl~iGDG~ND 889 (1184)
.++.+.... ...|+- -..+.+.+.- ....+++|||+.||
T Consensus 134 --------------~~~~~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iGD~~~D 174 (214)
T 3e58_A 134 --------------IVLSGEEFK------------------------ESKPNPEIYLTALKQLNV-QASRALIIEDSEKG 174 (214)
T ss_dssp --------------EEEEGGGCS------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEECSHHH
T ss_pred --------------eEeeccccc------------------------CCCCChHHHHHHHHHcCC-ChHHeEEEeccHhh
Confidence 111111100 011111 1122222222 44679999999999
Q ss_pred hhhhhhcCeeEEe-c-CcchhHHHhcCcccccchhhHHH
Q 001027 890 VSMIQMADVGVGI-S-GQEGRQAVMSSDFAMGQFRFLVT 926 (1184)
Q Consensus 890 v~mL~~AdVGI~i-s-g~e~~qA~~asD~~i~~f~~L~~ 926 (1184)
+.|.+.|++++.+ . +.... ....+|+++.++.-|..
T Consensus 175 i~~a~~aG~~~~~~~~~~~~~-~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 175 IAAGVAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHTTCEEEEECCSSSCC-CCTTSSEEESSGGGGGG
T ss_pred HHHHHHCCCEEEEECCCCccc-hhccHHHHHHHHHHHHh
Confidence 9999999998755 2 21221 23678999988766543
No 77
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.53 E-value=0.00014 Score=77.34 Aligned_cols=121 Identities=12% Similarity=0.107 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCc---HhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDK---QETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~---~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
.+.+++.++++.|++.|+++.++|+.. ...+..+....|+...-.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~-------------------------------- 146 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFID-------------------------------- 146 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCS--------------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhh--------------------------------
Confidence 458999999999999999999999998 777777777777632110
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHH-HHhc--CCCeEEEEcC
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVAL-VKTR--TSDMTLAIGD 885 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~-lk~~--~g~~vl~iGD 885 (1184)
.++.+.... ...| |..+.+. ++.. ....+++|||
T Consensus 147 -----------------~~~~~~~~~------------------------~~kp--~~~~~~~~~~~lgi~~~~~~~iGD 183 (235)
T 2om6_A 147 -----------------KTFFADEVL------------------------SYKP--RKEMFEKVLNSFEVKPEESLHIGD 183 (235)
T ss_dssp -----------------EEEEHHHHT------------------------CCTT--CHHHHHHHHHHTTCCGGGEEEEES
T ss_pred -----------------hheeccccC------------------------CCCC--CHHHHHHHHHHcCCCccceEEECC
Confidence 011110000 0112 2222332 3321 3467999999
Q ss_pred Cc-CChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhhHHHH
Q 001027 886 GA-NDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 886 G~-NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
+. ||+.|.+.|++++.+ .|.........+|+++.++.-+..+
T Consensus 184 ~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 184 TYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp CTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred ChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 99 999999999999876 2322111234578888887776655
No 78
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.50 E-value=6.8e-05 Score=83.03 Aligned_cols=126 Identities=11% Similarity=0.025 Sum_probs=82.5
Q ss_pred ccCCCChHHHHHHHHHcCC--eEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 731 DKLQQGVPEAIESLRAAGI--KVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGI--kv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
-++.+|+.++++.|++.|+ +++++|+.....+..+...+|+...-..
T Consensus 141 ~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~------------------------------- 189 (282)
T 3nuq_A 141 LKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG------------------------------- 189 (282)
T ss_dssp CCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE-------------------------------
T ss_pred cCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce-------------------------------
Confidence 3567899999999999999 9999999998888888888887431110
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CC-CeEEEEc
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TS-DMTLAIG 884 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g-~~vl~iG 884 (1184)
++.+..... .. ..++-|..+++.+.+. .. ..+++||
T Consensus 190 ------------------v~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~~~i~vG 229 (282)
T 3nuq_A 190 ------------------LTYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYENAYFID 229 (282)
T ss_dssp ------------------EECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred ------------------EEEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcccEEEEc
Confidence 111100000 00 1123444555444332 44 6799999
Q ss_pred CCcCChhhhhhcCeeEEe--cCcchhH---HHhcCcccccchhhHHHH
Q 001027 885 DGANDVSMIQMADVGVGI--SGQEGRQ---AVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 885 DG~NDv~mL~~AdVGI~i--sg~e~~q---A~~asD~~i~~f~~L~~l 927 (1184)
|+.||+.|.++|++|+++ .+.+... ....+|+++.++.-|..+
T Consensus 230 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 230 DSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 999999999999997655 3222110 134788999887765544
No 79
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.49 E-value=0.00015 Score=79.46 Aligned_cols=41 Identities=29% Similarity=0.186 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+...+.+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 67899999999999999999999999988888887777764
No 80
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.49 E-value=0.00042 Score=74.46 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=36.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 57899999999999999999999999888888888888764
No 81
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=97.48 E-value=0.00012 Score=80.15 Aligned_cols=41 Identities=34% Similarity=0.370 Sum_probs=35.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
..+.+++.+.++.|++.|+++.++|++..+.+..+....|+
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 102 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred cccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 35679999999999999999999999988877777666655
No 82
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.48 E-value=0.00022 Score=73.15 Aligned_cols=54 Identities=15% Similarity=0.134 Sum_probs=39.1
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee-EEe-cCcchhHHH----hcCcccccchhhHHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG-VGI-SGQEGRQAV----MSSDFAMGQFRFLVTLLL 929 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG-I~i-sg~e~~qA~----~asD~~i~~f~~L~~lLl 929 (1184)
....+++|||+.||+.|.++|++. |++ .|....... ..+|+++.++.-|..+|+
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 456799999999999999999964 344 333322222 457999999888877754
No 83
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.47 E-value=0.0001 Score=77.62 Aligned_cols=47 Identities=6% Similarity=-0.002 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchhhH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
....+++|||+.||+.|++.|++++.+.+... ..+ .||+++.++.-+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 34579999999999999999999998844332 234 899998876653
No 84
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.39 E-value=0.00014 Score=77.52 Aligned_cols=123 Identities=10% Similarity=-0.023 Sum_probs=82.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 143 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD---------------------------------- 143 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC----------------------------------
Confidence 4678999999999999999999999999988888888888743111
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHH-Hhc--CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALV-KTR--TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~l-k~~--~g~~vl~iGDG~ 887 (1184)
.++.+.... .++-|..+.+.+ +.. ....+++|||+.
T Consensus 144 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~ 182 (233)
T 3umb_A 144 ---------------HVLSVDAVR--------------------------LYKTAPAAYALAPRAFGVPAAQILFVSSNG 182 (233)
T ss_dssp ---------------EEEEGGGTT--------------------------CCTTSHHHHTHHHHHHTSCGGGEEEEESCH
T ss_pred ---------------EEEEecccC--------------------------CCCcCHHHHHHHHHHhCCCcccEEEEeCCH
Confidence 011111000 011122222222 221 446799999999
Q ss_pred CChhhhhhcCeeEEec--C-cchhHHHhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVGVGIS--G-QEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVGI~is--g-~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++++.+- | .........+|+++.++.-|..+|
T Consensus 183 ~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 183 WDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 9999999999998761 1 111112346899999988887774
No 85
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.37 E-value=0.00058 Score=72.69 Aligned_cols=122 Identities=17% Similarity=0.167 Sum_probs=81.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++. +++.++|+...+.+..+....|+..--.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 146 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK---------------------------------- 146 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----------------------------------
Confidence 36789999999999999 9999999999888888888877742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcCC----CeEEEEcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRTS----DMTLAIGDG 886 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~g----~~vl~iGDG 886 (1184)
.++.+.... ..+-|...++.+.+..| ..+++|||+
T Consensus 147 ---------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~ 185 (238)
T 3ed5_A 147 ---------------DIFVSEDTG--------------------------FQKPMKEYFNYVFERIPQFSAEHTLIIGDS 185 (238)
T ss_dssp ---------------EEEEGGGTT--------------------------SCTTCHHHHHHHHHTSTTCCGGGEEEEESC
T ss_pred ---------------eEEEecccC--------------------------CCCCChHHHHHHHHHcCCCChhHeEEECCC
Confidence 011111000 01222333333332233 579999999
Q ss_pred c-CChhhhhhcCee-EEe-cCcchhHHHhcCcccccchhhHHHHH
Q 001027 887 A-NDVSMIQMADVG-VGI-SGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 887 ~-NDv~mL~~AdVG-I~i-sg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
. ||+.|.+.|+++ |++ .|.........+|+++.++.-|..+|
T Consensus 186 ~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 186 LTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred cHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 8 999999999995 455 33212124457899999988887764
No 86
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.36 E-value=0.00019 Score=77.37 Aligned_cols=123 Identities=14% Similarity=0.131 Sum_probs=76.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+++.++++.|++.|+++.++|+.....+...... |+..--..
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 153 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--------------------------------- 153 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc---------------------------------
Confidence 46789999999999999999999999887766655555 55321000
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhc--CCCeEEEEcCCc
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTR--TSDMTLAIGDGA 887 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~-~lk~~--~g~~vl~iGDG~ 887 (1184)
..++.+... .+ ++-|..+++ .++.. ....+++|||+.
T Consensus 154 --------------d~i~~~~~~------------------------~~--~kp~~~~~~~~~~~lg~~~~~~i~vGD~~ 193 (243)
T 3qxg_A 154 --------------ELMVTAFDV------------------------KY--GKPNPEPYLMALKKGGLKADEAVVIENAP 193 (243)
T ss_dssp --------------GGEECTTTC------------------------SS--CTTSSHHHHHHHHHTTCCGGGEEEEECSH
T ss_pred --------------ceEEeHHhC------------------------CC--CCCChHHHHHHHHHcCCCHHHeEEEeCCH
Confidence 001111110 00 111222222 22221 346799999999
Q ss_pred CChhhhhhcCee-EEe-cCcchhHH--HhcCcccccchhhHHHH
Q 001027 888 NDVSMIQMADVG-VGI-SGQEGRQA--VMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 888 NDv~mL~~AdVG-I~i-sg~e~~qA--~~asD~~i~~f~~L~~l 927 (1184)
||+.|.+.|+++ |++ .|....+. ...+|+++.++.-|..+
T Consensus 194 ~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 194 LGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp HHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 999999999985 455 33332212 23699999998877665
No 87
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.34 E-value=0.00056 Score=73.59 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.+|+.++++.|++.|+++.++|+...+.+..+-..+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4679999999999999999999999988887777777776
No 88
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.33 E-value=0.00021 Score=77.76 Aligned_cols=127 Identities=14% Similarity=0.087 Sum_probs=82.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
.-++.+|+.++++.|++.|++++++|+.....+..+....|+..--..
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~-------------------------------- 155 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGE-------------------------------- 155 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCS--------------------------------
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccc--------------------------------
Confidence 346789999999999999999999999999888888888776310000
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDG 886 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG 886 (1184)
.++.+.... ....| |...++.+.+. ....+++|||+
T Consensus 156 ----------------~i~~~~~~~-----------------------~~~Kp--~~~~~~~~~~~lgi~~~~~i~iGD~ 194 (259)
T 4eek_A 156 ----------------HIYDPSWVG-----------------------GRGKP--HPDLYTFAAQQLGILPERCVVIEDS 194 (259)
T ss_dssp ----------------CEECGGGGT-----------------------TCCTT--SSHHHHHHHHHTTCCGGGEEEEESS
T ss_pred ----------------eEEeHhhcC-----------------------cCCCC--ChHHHHHHHHHcCCCHHHEEEEcCC
Confidence 011110000 00112 12222222222 34679999999
Q ss_pred cCChhhhhhcCee-EEec-Ccch----h-H-HHhcCcccccchhhHHHHHH
Q 001027 887 ANDVSMIQMADVG-VGIS-GQEG----R-Q-AVMSSDFAMGQFRFLVTLLL 929 (1184)
Q Consensus 887 ~NDv~mL~~AdVG-I~is-g~e~----~-q-A~~asD~~i~~f~~L~~lLl 929 (1184)
.||+.|.+.|+++ |++. |... . . ....+|+++.++.-|..+|-
T Consensus 195 ~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 195 VTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALA 245 (259)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHH
Confidence 9999999999998 5563 4111 1 1 22458999999888887753
No 89
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.32 E-value=0.00012 Score=76.86 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=35.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
-++.+|+.+.++.|++. +++.++|+.....+..+...+|+
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l 121 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPF 121 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcCh
Confidence 35789999999999999 99999999998888888777776
No 90
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=97.30 E-value=0.0016 Score=71.90 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=36.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+-+.+.++|++|+++|+++.+.||.....+..+...+++
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 65 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGL 65 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4557789999999999999999999999999999998876
No 91
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.30 E-value=0.00023 Score=76.41 Aligned_cols=126 Identities=11% Similarity=0.087 Sum_probs=75.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
..++.+|+.++++.|++.|+++.++|+.....+...... |+..--..
T Consensus 106 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~-------------------------------- 152 (247)
T 3dv9_A 106 KAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA-------------------------------- 152 (247)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG--------------------------------
T ss_pred cCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC--------------------------------
Confidence 347789999999999999999999999877666555555 55321000
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhcCCCeEEEEcCCc
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTRTSDMTLAIGDGA 887 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~~g~~vl~iGDG~ 887 (1184)
..++.+... ..-.|+-. ..+.+.+.- ....+++|||+.
T Consensus 153 ---------------~~~~~~~~~------------------------~~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~ 192 (247)
T 3dv9_A 153 ---------------NLMVTAFDV------------------------KYGKPNPEPYLMALKKGGF-KPNEALVIENAP 192 (247)
T ss_dssp ---------------GGEECGGGC------------------------SSCTTSSHHHHHHHHHHTC-CGGGEEEEECSH
T ss_pred ---------------CeEEecccC------------------------CCCCCCCHHHHHHHHHcCC-ChhheEEEeCCH
Confidence 001111100 00112111 122222221 446799999999
Q ss_pred CChhhhhhcCee-EEe-cCcchhHH--HhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVG-VGI-SGQEGRQA--VMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVG-I~i-sg~e~~qA--~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.++|+++ |++ .|...... ...+|+++.++.-|..+|
T Consensus 193 ~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 193 LGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 999999999976 455 33332212 237999999988776653
No 92
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.28 E-value=0.00053 Score=72.17 Aligned_cols=118 Identities=13% Similarity=0.159 Sum_probs=80.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++ |+++.++|+.....+..+-..+|+..--
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f------------------------------------ 126 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF------------------------------------ 126 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC------------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe------------------------------------
Confidence 578999999999999 9999999998888888877788874311
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhcC---CCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTRT---SDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~~---g~~vl~iGDG~N 888 (1184)
..++++.-.++-|..+.+.+.++. ...+++|||+.|
T Consensus 127 -----------------------------------------~~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~ 165 (210)
T 2ah5_A 127 -----------------------------------------DGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKF 165 (210)
T ss_dssp -----------------------------------------SEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred -----------------------------------------eeeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHH
Confidence 111333222345555655554433 357999999999
Q ss_pred ChhhhhhcCeeE-Eec-CcchhH-HH-hcCcccccchhhHHHH
Q 001027 889 DVSMIQMADVGV-GIS-GQEGRQ-AV-MSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 889 Dv~mL~~AdVGI-~is-g~e~~q-A~-~asD~~i~~f~~L~~l 927 (1184)
|+.|.++|++.. ++. |..... .. ..+|+++.++.-+..+
T Consensus 166 Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~~ 208 (210)
T 2ah5_A 166 DMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp HHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred HHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 999999999832 442 222111 22 3589999887665443
No 93
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.28 E-value=0.00056 Score=72.72 Aligned_cols=120 Identities=17% Similarity=0.166 Sum_probs=78.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.+.++.|++. +++.++|+.....+..+....|+...-.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~----------------------------------- 143 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD----------------------------------- 143 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc-----------------------------------
Confidence 5679999999999999 9999999999988888888877742110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc-
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA- 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~- 887 (1184)
.++.+.... . .+-|..+++.+.+. ....+++|||+.
T Consensus 144 --------------~~~~~~~~~------------------------~--~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~ 183 (234)
T 3u26_A 144 --------------SITTSEEAG------------------------F--FKPHPRIFELALKKAGVKGEEAVYVGDNPV 183 (234)
T ss_dssp --------------EEEEHHHHT------------------------B--CTTSHHHHHHHHHHHTCCGGGEEEEESCTT
T ss_pred --------------eeEeccccC------------------------C--CCcCHHHHHHHHHHcCCCchhEEEEcCCcH
Confidence 011110000 0 11122222222221 346799999997
Q ss_pred CChhhhhhcCee---EEecCcchhHHHhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVG---VGISGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVG---I~isg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++. |.. |.........+|+++.++.-|..+|
T Consensus 184 ~Di~~a~~aG~~~~~v~~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 184 KDCGGSKNLGMTSILLDR-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp TTHHHHHTTTCEEEEECS-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECC-CCCccccccCCCEeeCCHHHHHHHH
Confidence 999999999954 443 2222224458999999988776664
No 94
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=97.26 E-value=0.00046 Score=74.85 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=46.1
Q ss_pred ecCcc--cHHHHHHHHHhcCC---CeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhc-------Ccccccch
Q 001027 859 RVAPL--QKAGIVALVKTRTS---DMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMS-------SDFAMGQF 921 (1184)
Q Consensus 859 r~sP~--qK~~iV~~lk~~~g---~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~a-------sD~~i~~f 921 (1184)
.+.|. .|+..++.+.+..| ..|+++||+.||.+|++.|++||++..... ..+.. ||++..+.
T Consensus 155 ei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~ 228 (244)
T 1s2o_A 155 DLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSS 228 (244)
T ss_dssp EEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSC
T ss_pred EeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCc
Confidence 34444 89999998876533 579999999999999999999999943222 24443 78887653
No 95
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.25 E-value=0.0004 Score=74.58 Aligned_cols=41 Identities=27% Similarity=0.270 Sum_probs=37.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57899999999999999999999999988888888888874
No 96
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.19 E-value=0.00061 Score=72.56 Aligned_cols=121 Identities=16% Similarity=0.122 Sum_probs=80.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.++++.|+ .|+++.++|+.....+..+...+|+...-.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----------------------------------- 150 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----------------------------------- 150 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce-----------------------------------
Confidence 57899999999999 999999999998888888877777642110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCc-
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGA- 887 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~- 887 (1184)
.++.+.... ..+-|..+++.+.+. ....+++|||+.
T Consensus 151 --------------~~~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~ 190 (240)
T 3qnm_A 151 --------------KIILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESLMIGDSWE 190 (240)
T ss_dssp --------------EEEEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEEEEESCTT
T ss_pred --------------eEEEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEEEECCCch
Confidence 011111000 012223333333222 346799999995
Q ss_pred CChhhhhhcCeeEEecCcch-hHHHhcCcccccchhhHHHHH
Q 001027 888 NDVSMIQMADVGVGISGQEG-RQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 888 NDv~mL~~AdVGI~isg~e~-~qA~~asD~~i~~f~~L~~lL 928 (1184)
||+.|.+.|++++.+-.... ......+|+++.++.-+..++
T Consensus 191 ~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 191 ADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp TTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHHT
T ss_pred HhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHHH
Confidence 99999999999987622221 114457999999988777653
No 97
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.18 E-value=0.00063 Score=70.37 Aligned_cols=42 Identities=21% Similarity=0.196 Sum_probs=37.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCc-HhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDK-QETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~-~eTAi~Ia~~~gl~ 772 (1184)
-++.+++.++|+.|++.|+++.++||.. ...+..+...+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3688999999999999999999999998 68888888888874
No 98
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.18 E-value=0.00029 Score=75.09 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
No 99
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.05 E-value=0.0011 Score=70.01 Aligned_cols=53 Identities=21% Similarity=0.304 Sum_probs=37.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee--EEe-cCcchhH-HHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG--VGI-SGQEGRQ-AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG--I~i-sg~e~~q-A~~asD~~i~~f~~L~~lL 928 (1184)
....++||||+.||+.|-++|++. |++ .|....+ ....+|+++.++.-|..+|
T Consensus 147 ~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 147 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred CHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 345799999999999999999974 555 3322111 2345899998887776653
No 100
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.03 E-value=0.00022 Score=77.12 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=36.5
Q ss_pred CeEEEEcCCcCChhhhhhcCeeE-Ee-cCcchhHHHhcCcccccchhhHHHH
Q 001027 878 DMTLAIGDGANDVSMIQMADVGV-GI-SGQEGRQAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 878 ~~vl~iGDG~NDv~mL~~AdVGI-~i-sg~e~~qA~~asD~~i~~f~~L~~l 927 (1184)
..+++|||+.||+.|.++|++++ ++ .|.........+|+++.++.-|...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHH
Confidence 67999999999999999999654 22 2322222567899999887765444
No 101
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.02 E-value=0.0016 Score=66.72 Aligned_cols=39 Identities=15% Similarity=0.325 Sum_probs=31.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+.+++.+.++.|++.|++++++|+... .+..+....|+
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~ 120 (190)
T 2fi1_A 82 ILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSI 120 (190)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTC
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCC
Confidence 3679999999999999999999998764 45556666665
No 102
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=96.96 E-value=0.0012 Score=69.85 Aligned_cols=53 Identities=11% Similarity=0.289 Sum_probs=38.8
Q ss_pred CCCeEEEEcCCcCChhhhhhcCee-EEecCcch------hHHHhc-CcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGANDVSMIQMADVG-VGISGQEG------RQAVMS-SDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~NDv~mL~~AdVG-I~isg~e~------~qA~~a-sD~~i~~f~~L~~lL 928 (1184)
....+++|||+.||+.|.+.|+++ |++..... ...+.. +|+++.++.-+..+|
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 346799999999999999999998 67743222 113444 999998877766553
No 103
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=96.88 E-value=0.0013 Score=70.71 Aligned_cols=122 Identities=9% Similarity=0.064 Sum_probs=81.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.++++.|++. +++.++|+.....+..+...+|+.- + .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f-~-------~---------------------------- 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW-D-------V---------------------------- 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC-S-------C----------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe-e-------E----------------------------
Confidence 5679999999999997 9999999999888888888877630 0 0
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~N 888 (1184)
++.+. .+....| |...++.+.++ ....+++|||+.|
T Consensus 159 ---------------~~~~~------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~iGD~~~ 197 (254)
T 3umg_A 159 ---------------IIGSD------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLAAAHNG 197 (254)
T ss_dssp ---------------CCCHH------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred ---------------EEEcC------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEEeCChH
Confidence 00000 0001112 23333333332 3367999999999
Q ss_pred ChhhhhhcCeeEEecCcc---hh------HHHhcCcccccchhhHHHHHHHH
Q 001027 889 DVSMIQMADVGVGISGQE---GR------QAVMSSDFAMGQFRFLVTLLLVH 931 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~e---~~------qA~~asD~~i~~f~~L~~lLl~h 931 (1184)
|+.|.+.|++++.+-... |. .....+|+++.++.-|..+|..+
T Consensus 198 Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 198 DLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred hHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 999999999998763211 10 02457899999998888775433
No 104
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=96.86 E-value=0.00073 Score=72.86 Aligned_cols=119 Identities=9% Similarity=0.028 Sum_probs=79.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+++.+.++.|++. +++.++|+...+.+..+...+|+. ...
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~---f~~--------------------------------- 162 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP---WDM--------------------------------- 162 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC---CSE---------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC---cce---------------------------------
Confidence 5679999999999985 999999999888888888777763 000
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc---CCCeEEEEcCCcC
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR---TSDMTLAIGDGAN 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~---~g~~vl~iGDG~N 888 (1184)
++.+... -..+-|..+++.+.+. ....+++|||+.|
T Consensus 163 ---------------~~~~~~~--------------------------~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~ 201 (254)
T 3umc_A 163 ---------------LLCADLF--------------------------GHYKPDPQVYLGACRLLDLPPQEVMLCAAHNY 201 (254)
T ss_dssp ---------------ECCHHHH--------------------------TCCTTSHHHHHHHHHHHTCCGGGEEEEESCHH
T ss_pred ---------------EEeeccc--------------------------ccCCCCHHHHHHHHHHcCCChHHEEEEcCchH
Confidence 0000000 0122333334333322 3467999999999
Q ss_pred ChhhhhhcCeeEEecCc---chh---H---HHhcCcccccchhhHHHHH
Q 001027 889 DVSMIQMADVGVGISGQ---EGR---Q---AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 889 Dv~mL~~AdVGI~isg~---e~~---q---A~~asD~~i~~f~~L~~lL 928 (1184)
|+.|.+.|++++.+-.. .|. . ....+|+++.++.-|..+|
T Consensus 202 Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 202 DLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp HHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred hHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 99999999999877321 111 0 1457899999988877664
No 105
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=96.86 E-value=0.0014 Score=70.93 Aligned_cols=39 Identities=10% Similarity=0.116 Sum_probs=35.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+ |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999998888888888874
No 106
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=96.85 E-value=0.0013 Score=68.49 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=77.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVS 810 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 810 (1184)
-++.+|+.+ ++.|++. +++.++|+...+.+..+...+|+...-.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 116 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFK---------------------------------- 116 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCc----------------------------------
Confidence 367899999 9999999 9999999999888888888888742110
Q ss_pred CCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHH-HHHhcCCCeEEEEcCCcCC
Q 001027 811 HNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVA-LVKTRTSDMTLAIGDGAND 889 (1184)
Q Consensus 811 ~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~-~lk~~~g~~vl~iGDG~ND 889 (1184)
.++.+.... +..| |..+.+ .+++.....+++|||+.||
T Consensus 117 ---------------~~~~~~~~~------------------------~~Kp--~~~~~~~~~~~~~~~~~~~vGD~~~D 155 (201)
T 2w43_A 117 ---------------GIFSAESVK------------------------EYKP--SPKVYKYFLDSIGAKEAFLVSSNAFD 155 (201)
T ss_dssp ---------------EEEEGGGGT------------------------CCTT--CHHHHHHHHHHHTCSCCEEEESCHHH
T ss_pred ---------------EEEehhhcC------------------------CCCC--CHHHHHHHHHhcCCCcEEEEeCCHHH
Confidence 111111100 0112 122322 2232124569999999999
Q ss_pred hhhhhhcCeeEEe-c-Ccchh-HHHhcCcccccchhhHHHH
Q 001027 890 VSMIQMADVGVGI-S-GQEGR-QAVMSSDFAMGQFRFLVTL 927 (1184)
Q Consensus 890 v~mL~~AdVGI~i-s-g~e~~-qA~~asD~~i~~f~~L~~l 927 (1184)
+.|.+.|++++.+ . |.... .....+|+++.++.-+..+
T Consensus 156 i~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 156 VIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp HHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred hHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 9999999998644 2 21111 1123589999887776655
No 107
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=96.85 E-value=0.0011 Score=73.67 Aligned_cols=59 Identities=22% Similarity=0.277 Sum_probs=45.0
Q ss_pred ccHHHHHHHHHhcC---CCeEEEEcCCcCChhhhhhcCeeEEecCcchhHHHhcCcccccchh
Q 001027 863 LQKAGIVALVKTRT---SDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMSSDFAMGQFR 922 (1184)
Q Consensus 863 ~qK~~iV~~lk~~~---g~~vl~iGDG~NDv~mL~~AdVGI~isg~e~~qA~~asD~~i~~f~ 922 (1184)
..|...++.+.+.. ...++++||+.||.+|++.|++|+++..... ..+..||+++....
T Consensus 210 ~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~-~~~~~a~~v~~~~~ 271 (289)
T 3gyg_A 210 TGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQ-EAKNLHNLITDSEY 271 (289)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCH-HHHHHCCCBCSSCH
T ss_pred CCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccH-HHHHhCCEEcCCCC
Confidence 47888887776542 3569999999999999999999999943322 26677999887643
No 108
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.81 E-value=0.001 Score=72.82 Aligned_cols=122 Identities=11% Similarity=0.103 Sum_probs=77.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGVSH 811 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 811 (1184)
++.+|+.++++.|++.|+++.++|+.... +..+...+|+...-.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~----------------------------------- 149 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFD----------------------------------- 149 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCS-----------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhh-----------------------------------
Confidence 57899999999999999999999986654 566777777642110
Q ss_pred CcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcc--cHHHHHHHHHhcCCCeEEEEcCCc-C
Q 001027 812 NSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPL--QKAGIVALVKTRTSDMTLAIGDGA-N 888 (1184)
Q Consensus 812 ~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~--qK~~iV~~lk~~~g~~vl~iGDG~-N 888 (1184)
.++.+.... ...|. --..+.+.+.- ....+++|||+. |
T Consensus 150 --------------~~~~~~~~~------------------------~~Kp~~~~~~~~~~~~g~-~~~~~~~vGD~~~~ 190 (263)
T 3k1z_A 150 --------------FVLTSEAAG------------------------WPKPDPRIFQEALRLAHM-EPVVAAHVGDNYLC 190 (263)
T ss_dssp --------------CEEEHHHHS------------------------SCTTSHHHHHHHHHHHTC-CGGGEEEEESCHHH
T ss_pred --------------EEEeecccC------------------------CCCCCHHHHHHHHHHcCC-CHHHEEEECCCcHH
Confidence 011110000 01111 11122222222 446799999997 9
Q ss_pred ChhhhhhcCeeEEe--cCcchhH---HHhcCcccccchhhHHHHH
Q 001027 889 DVSMIQMADVGVGI--SGQEGRQ---AVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 889 Dv~mL~~AdVGI~i--sg~e~~q---A~~asD~~i~~f~~L~~lL 928 (1184)
|+.|.++|++++.+ .+..... ....+|+++.++.-|..+|
T Consensus 191 Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 191 DYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp HTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred HHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 99999999999866 2322111 2236899999988877765
No 109
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=96.77 E-value=0.0067 Score=66.34 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=43.4
Q ss_pred cHHHHHHHHHhc-CCCeEEEEcC----CcCChhhhhhcC-eeEEecCcchhHHHhcCcccccc
Q 001027 864 QKAGIVALVKTR-TSDMTLAIGD----GANDVSMIQMAD-VGVGISGQEGRQAVMSSDFAMGQ 920 (1184)
Q Consensus 864 qK~~iV~~lk~~-~g~~vl~iGD----G~NDv~mL~~Ad-VGI~isg~e~~qA~~asD~~i~~ 920 (1184)
.|+.-++.+ .. ....|+++|| |.||.+||+.|+ +|++|. +.....+..||++...
T Consensus 197 sKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 197 DKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPE 257 (262)
T ss_dssp STTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCC
Confidence 799999998 33 4568999999 999999999999 699993 3333367778887643
No 110
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0014 Score=72.14 Aligned_cols=40 Identities=20% Similarity=-0.002 Sum_probs=35.1
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~a-GIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.+.+++.+.++.|++. |+++.++|+...+.+..+....|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4579999999999999 999999999998888777777665
No 111
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=96.73 E-value=0.0051 Score=66.32 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
++.+|+.++++.|+ .|+++.++|+.....+.......|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56899999999999 9999999999988877777666666
No 112
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=96.72 E-value=0.0045 Score=63.98 Aligned_cols=42 Identities=17% Similarity=0.242 Sum_probs=36.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcH---hHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQ---ETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~---eTAi~Ia~~~gl~ 772 (1184)
-++.+|+.++++.|+++|+++.++|+-.. +.+..+...+|+.
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~ 77 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGII 77 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCG
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCch
Confidence 36889999999999999999999998765 7888888888874
No 113
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=96.55 E-value=0.0066 Score=65.80 Aligned_cols=42 Identities=19% Similarity=0.296 Sum_probs=36.9
Q ss_pred cHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcC-eeEEecCcc
Q 001027 864 QKAGIVALVKTRTSDMTLAIGD----GANDVSMIQMAD-VGVGISGQE 906 (1184)
Q Consensus 864 qK~~iV~~lk~~~g~~vl~iGD----G~NDv~mL~~Ad-VGI~isg~e 906 (1184)
.|+.-++.+.+ ...-|+++|| |.||.+||+.|+ +|+++...+
T Consensus 187 ~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~ 233 (246)
T 3f9r_A 187 DKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYK 233 (246)
T ss_dssp SGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHH
T ss_pred CHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHH
Confidence 89999998887 7788999999 799999999995 899996544
No 114
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.54 E-value=0.0012 Score=70.07 Aligned_cols=29 Identities=31% Similarity=0.292 Sum_probs=27.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQ 759 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~ 759 (1184)
.++.+|+.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 57889999999999999999999999877
No 115
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=96.53 E-value=0.053 Score=58.51 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=35.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCcc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLL 772 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~ 772 (1184)
+-+++.++++.|++.|+++.++| |...........+.|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99988888888887774
No 116
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=96.52 E-value=0.014 Score=63.58 Aligned_cols=44 Identities=11% Similarity=0.114 Sum_probs=35.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC---CcHhHHHHHHHHcCccCC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLTS 774 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTG---D~~eTAi~Ia~~~gl~~~ 774 (1184)
+++-+++.++|++|+++|++++++|| ............+|+...
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 34446799999999999999999988 666667777778887543
No 117
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=96.47 E-value=0.0018 Score=68.67 Aligned_cols=53 Identities=11% Similarity=0.049 Sum_probs=39.2
Q ss_pred CCCeEEEEcCCc-CChhhhhhcCeeEEecCcc------h----hHHHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGA-NDVSMIQMADVGVGISGQE------G----RQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~-NDv~mL~~AdVGI~isg~e------~----~qA~~asD~~i~~f~~L~~lL 928 (1184)
....+++|||+. ||+.|.++|++++.+-... + ......+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 346799999996 9999999999998762211 0 112367999999988776664
No 118
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=96.33 E-value=0.03 Score=60.99 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=37.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCccC
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~~ 773 (1184)
.++-+++.++|++|+++|+++.++| |............+|+-.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5677899999999999999999999 888888888888888743
No 119
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.09 E-value=0.0054 Score=64.82 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred CCCeEEEEcCCc-CChhhhhhcCeeEEe--cCcchhHHHhcCcccccchhhHHHHH
Q 001027 876 TSDMTLAIGDGA-NDVSMIQMADVGVGI--SGQEGRQAVMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 876 ~g~~vl~iGDG~-NDv~mL~~AdVGI~i--sg~e~~qA~~asD~~i~~f~~L~~lL 928 (1184)
....+++|||+. ||+.|.+.|++++.. .|.........+|+++.++.-|..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 446799999998 999999999998755 22221111457899999988877664
No 120
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=96.04 E-value=0.0024 Score=66.10 Aligned_cols=40 Identities=10% Similarity=-0.012 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+++.++++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999988888888877764
No 121
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.00 E-value=0.0099 Score=64.80 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|++ |+++.++|+.....+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 677999999999998 6999999999998888888888874
No 122
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=95.88 E-value=0.022 Score=59.60 Aligned_cols=42 Identities=29% Similarity=0.251 Sum_probs=38.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
++.+|+.++++.|++.|+++.++|+-....+..+-..+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999988888853
No 123
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=95.78 E-value=0.029 Score=58.35 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=29.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISI 765 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~I 765 (1184)
++.+|+.++++.|+++|+++.++||-....+..+
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 6789999999999999999999999887766443
No 124
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=95.75 E-value=0.014 Score=63.62 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=36.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CcHhHHHHHHHHcCccCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLLTS 774 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTG---D~~eTAi~Ia~~~gl~~~ 774 (1184)
.+++-+++.++|++|+++|+++.++|| ............+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 566666677778888543
No 125
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=95.70 E-value=0.025 Score=61.59 Aligned_cols=43 Identities=19% Similarity=0.181 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCccCCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLLTSK 775 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~~~~ 775 (1184)
.+ +++.++|++|+++|++++++| |...........++|+-...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~ 67 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPL 67 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCG
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCCh
Confidence 45 899999999999999999999 78888888888888885443
No 126
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=95.63 E-value=0.056 Score=57.28 Aligned_cols=61 Identities=15% Similarity=0.123 Sum_probs=40.6
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCC-cCChhhhhhcCeeEEe--cCcchhH-HH---hcCcccccchhh
Q 001027 863 LQKAGIVALVKTR---TSDMTLAIGDG-ANDVSMIQMADVGVGI--SGQEGRQ-AV---MSSDFAMGQFRF 923 (1184)
Q Consensus 863 ~qK~~iV~~lk~~---~g~~vl~iGDG-~NDv~mL~~AdVGI~i--sg~e~~q-A~---~asD~~i~~f~~ 923 (1184)
+.|...++.+.++ ....|+||||+ .||+.|++.|++++.. .|....+ .. ..+|+++.++.-
T Consensus 176 kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 3455666655443 34679999999 7999999999999643 3432211 22 358888876543
No 127
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=95.62 E-value=0.0026 Score=66.49 Aligned_cols=36 Identities=14% Similarity=0.153 Sum_probs=30.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999877766555444
No 128
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=95.56 E-value=0.13 Score=52.84 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=36.4
Q ss_pred EecChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhh
Q 001027 638 FVKGADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSV 717 (1184)
Q Consensus 638 ~~KGa~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~i 717 (1184)
+.-|..+.|.+. +-.+.+.....+.++..+|..++.+|.
T Consensus 134 v~iGn~~~m~~~-----gi~i~~~~~~~~~~~~~~G~T~V~vai------------------------------------ 172 (185)
T 2kmv_A 134 VLIGNREWMIRN-----GLVINNDVNDFMTEHERKGRTAVLVAV------------------------------------ 172 (185)
T ss_dssp EEEECHHHHHHH-----TCCCCHHHHHHHHHHHHTTCEEEEEEE------------------------------------
T ss_pred EEECCHHHHHHc-----CCCCCHHHHHHHHHHHhCCCeEEEEEE------------------------------------
Confidence 344888877442 112223445667788889998888985
Q ss_pred ccCcEEEEeeccccc
Q 001027 718 ENNLCILGASGIEDK 732 (1184)
Q Consensus 718 E~dl~llG~~~ieD~ 732 (1184)
|-.++|++++.|+
T Consensus 173 --dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 --DDELCGLIAIADT 185 (185)
T ss_dssp --TTEEEEEEEEECC
T ss_pred --CCEEEEEEEEEcC
Confidence 6689999999985
No 129
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=95.37 E-value=0.0027 Score=61.23 Aligned_cols=41 Identities=12% Similarity=0.099 Sum_probs=34.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
.++.+++.++++.|++.|+++.++|+.....+..+...+|+
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 34678899999999999999999999988877777666665
No 130
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=95.17 E-value=0.017 Score=66.27 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 735 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 735 ~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
+|+++.|+.|+++||++.++|+-+.+.+..+.+.
T Consensus 259 pgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 259 TEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 6799999999999999999999999999999887
No 131
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=95.14 E-value=0.058 Score=62.19 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
++.||+.++++.|+++|+++.++|+-....+..+-...|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999988888888888853
No 132
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=95.04 E-value=0.024 Score=61.18 Aligned_cols=116 Identities=15% Similarity=0.229 Sum_probs=74.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCCC
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPGV 809 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 809 (1184)
..++.+|+.++++.|++.|+++.+.|+-+ .+..+-..+|+...-
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F---------------------------------- 157 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF---------------------------------- 157 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC----------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc----------------------------------
Confidence 34678999999999999999999877653 456666777774311
Q ss_pred CCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccH--HHHHHHHHhcCCCeEEEEcCCc
Q 001027 810 SHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQK--AGIVALVKTRTSDMTLAIGDGA 887 (1184)
Q Consensus 810 ~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK--~~iV~~lk~~~g~~vl~iGDG~ 887 (1184)
..++.+.... +..|.-. ..+.+.+.- ....+++|||..
T Consensus 158 ---------------d~i~~~~~~~------------------------~~KP~p~~~~~a~~~lg~-~p~e~l~VGDs~ 197 (250)
T 4gib_A 158 ---------------DFIADAGKCK------------------------NNKPHPEIFLMSAKGLNV-NPQNCIGIEDAS 197 (250)
T ss_dssp ---------------SEECCGGGCC------------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEESSH
T ss_pred ---------------ceeecccccC------------------------CCCCcHHHHHHHHHHhCC-ChHHeEEECCCH
Confidence 1122221111 1112211 122233322 446799999999
Q ss_pred CChhhhhhcCe-eEEecCcchhHHHhcCcccccchhhH
Q 001027 888 NDVSMIQMADV-GVGISGQEGRQAVMSSDFAMGQFRFL 924 (1184)
Q Consensus 888 NDv~mL~~AdV-GI~isg~e~~qA~~asD~~i~~f~~L 924 (1184)
+|+.+=++|++ .|++...+. ...||+++.++.-|
T Consensus 198 ~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 198 AGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp HHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred HHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 99999999997 467754443 34689999887654
No 133
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=95.03 E-value=0.0017 Score=67.54 Aligned_cols=30 Identities=27% Similarity=0.357 Sum_probs=26.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 678999999999999999999999865443
No 134
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=94.79 E-value=0.036 Score=58.31 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
++.+|+.++++.|+++|+++.++|+.... +..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHHHhcCcH
Confidence 67899999999999999999999998664 66677777763
No 135
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=94.38 E-value=0.073 Score=57.61 Aligned_cols=43 Identities=9% Similarity=0.113 Sum_probs=35.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh----HHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQE----TAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~e----TAi~Ia~~~gl~ 772 (1184)
+.++-||+.+.++.|+++|+++.++||.... .+..-.++.||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 5788999999999999999999999998653 555666667774
No 136
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=94.20 E-value=0.011 Score=63.90 Aligned_cols=52 Identities=17% Similarity=0.209 Sum_probs=39.1
Q ss_pred cHHHHHHHHHhc-CCCeEEEEcC----CcCChhhhhhcCe-eEEecCcchhHHHhcCccc
Q 001027 864 QKAGIVALVKTR-TSDMTLAIGD----GANDVSMIQMADV-GVGISGQEGRQAVMSSDFA 917 (1184)
Q Consensus 864 qK~~iV~~lk~~-~g~~vl~iGD----G~NDv~mL~~AdV-GI~isg~e~~qA~~asD~~ 917 (1184)
.|+.-++.+ .. ....|+++|| |.||.+||+.|+. |++|..+.. ..+..||++
T Consensus 188 ~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~-~vk~~A~~v 245 (246)
T 2amy_A 188 DKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPED-TRRICELLF 245 (246)
T ss_dssp SGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHH-HHHHHHHHC
T ss_pred chHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCH-HHHHHHhhc
Confidence 788888777 32 4568999999 9999999999987 999954433 377788876
No 137
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=93.86 E-value=0.2 Score=55.72 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=35.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCcHhHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLT---GDKQETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlT---GD~~eTAi~Ia~~~gl~ 772 (1184)
.+++-+++.++|+.|++.|++++++| |..........+..|+-
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 56777899999999999999999999 56666666666677774
No 138
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=93.85 E-value=0.54 Score=50.24 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=42.4
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcCeeE-Ee-cCcc-hhHH---HhcCcccccchhhHHHHH
Q 001027 864 QKAGIVALVKTR---TSDMTLAIGDGA-NDVSMIQMADVGV-GI-SGQE-GRQA---VMSSDFAMGQFRFLVTLL 928 (1184)
Q Consensus 864 qK~~iV~~lk~~---~g~~vl~iGDG~-NDv~mL~~AdVGI-~i-sg~e-~~qA---~~asD~~i~~f~~L~~lL 928 (1184)
-|..+.+.+.+. ....++||||+. ||+.|.+.|++-. ++ .|.. ..+. ...+|+++.++.-+..+|
T Consensus 180 p~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l 254 (259)
T 2ho4_A 180 PEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHI 254 (259)
T ss_dssp TSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHH
Confidence 345555555443 235799999998 9999999999754 45 3421 1111 245889988877776653
No 139
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=93.26 E-value=0.14 Score=54.14 Aligned_cols=40 Identities=20% Similarity=0.159 Sum_probs=35.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
-++.+|+.++++.|++.| ++.++|+-....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 478999999999999999 9999999988888888877776
No 140
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=93.23 E-value=0.021 Score=60.42 Aligned_cols=34 Identities=12% Similarity=0.087 Sum_probs=29.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIG 766 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia 766 (1184)
++.+|+.++++.|++. +++.++|+.....+..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~ 145 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVC 145 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHH
Confidence 4668999999999998 999999999888777665
No 141
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=93.16 E-value=0.1 Score=56.51 Aligned_cols=43 Identities=16% Similarity=0.085 Sum_probs=35.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcH----hHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQ----ETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~----eTAi~Ia~~~gl~ 772 (1184)
++++-||+.+.++.|+++|+++.++||... +.+..-....||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 578999999999999999999999999865 3555555667774
No 142
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=93.16 E-value=0.13 Score=56.01 Aligned_cols=43 Identities=12% Similarity=0.166 Sum_probs=33.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHh---HHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQE---TAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~e---TAi~Ia~~~gl~ 772 (1184)
+.++-||+.++|+.|++.|+++.++||-... .+...-..+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 4578899999999999999999999998743 333444556663
No 143
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=92.60 E-value=0.038 Score=56.32 Aligned_cols=41 Identities=22% Similarity=0.282 Sum_probs=34.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC---------------cHhHHHHHHHHcCcc
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD---------------KQETAISIGYSSKLL 772 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD---------------~~eTAi~Ia~~~gl~ 772 (1184)
++.||+.++|+.|++.|+++.++|+- ....+..+....|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 67899999999999999999999997 455666777777763
No 144
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=92.24 E-value=0.092 Score=59.15 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=38.5
Q ss_pred ecccccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc
Q 001027 727 SGIEDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 727 ~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~ 769 (1184)
..+...+.++..+.++.|+++|++||++||=..+.+..+|...
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 138 DVEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp EECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred cccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 3344578899999999999999999999999999999999875
No 145
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=91.58 E-value=0.087 Score=58.48 Aligned_cols=33 Identities=21% Similarity=0.228 Sum_probs=29.0
Q ss_pred ccccCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 729 IEDKLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 729 ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
.++++.+|+.++++.|+++|+++.++||-....
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 356789999999999999999999999987554
No 146
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=89.33 E-value=0.43 Score=51.76 Aligned_cols=38 Identities=21% Similarity=0.268 Sum_probs=32.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS 768 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~ 768 (1184)
-++.+|+.++++.|+++|+++.++|+-....+..+-..
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 47889999999999999999999999988877665543
No 147
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=88.77 E-value=0.64 Score=49.56 Aligned_cols=40 Identities=23% Similarity=0.209 Sum_probs=31.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
.++.+|+.++++.|++.|+++.++|+... +..+-...|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 46789999999999999999999998643 34455666764
No 148
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=87.96 E-value=0.91 Score=48.80 Aligned_cols=42 Identities=7% Similarity=0.117 Sum_probs=33.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH----cCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS----SKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~----~gl~ 772 (1184)
++.-+++.++++.|++.|+++.++||....+...++.. +|+-
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34447888999999999999999999987776666654 7764
No 149
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=87.76 E-value=3.4 Score=44.31 Aligned_cols=42 Identities=26% Similarity=0.279 Sum_probs=33.9
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHH---cCc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYS---SKL 771 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~---~gl 771 (1184)
.+.+-+++.++|+.|+++|+++.++||....+...++.. +|+
T Consensus 15 ~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~ 59 (263)
T 1zjj_A 15 GNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGI 59 (263)
T ss_dssp TTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 334448999999999999999999999987776666665 465
No 150
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=85.94 E-value=2.8 Score=41.91 Aligned_cols=36 Identities=8% Similarity=0.166 Sum_probs=22.7
Q ss_pred ChhhHHHHHHHhhhchhhHHHHHHHHHHHhhccCeEEEEEE
Q 001027 641 GADTSMFSVIAKALNMNVIRGTESHLHAYSSLGLRTLVVGM 681 (1184)
Q Consensus 641 Ga~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~~A~ 681 (1184)
|....|.+. +-.........+.++..+|..++.+|.
T Consensus 118 Gn~~~m~~~-----gi~~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 118 GNREWLRRN-----GLTISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp ECHHHHHHH-----HCSSCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred cCHHHHHhc-----CCCCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 888776442 111223345566677888998888885
No 151
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=84.41 E-value=0.16 Score=53.27 Aligned_cols=29 Identities=14% Similarity=0.200 Sum_probs=25.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
+.+++.++++.|+++|+++.++||-....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999986543
No 152
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=78.06 E-value=3.3 Score=48.14 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=24.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDK 758 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~ 758 (1184)
+-+|+.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
No 153
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=75.49 E-value=2.4 Score=41.22 Aligned_cols=39 Identities=13% Similarity=0.045 Sum_probs=32.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCc---HhHHHHHHHHcCc
Q 001027 733 LQQGVPEAIESLRAAGIKVWVLTGDK---QETAISIGYSSKL 771 (1184)
Q Consensus 733 lq~~v~e~I~~L~~aGIkv~mlTGD~---~eTAi~Ia~~~gl 771 (1184)
+-+++.++|++|+++|++++++||.. ...+.....+.|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCC
Confidence 45799999999999999999999987 5566667777776
No 154
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=74.98 E-value=1.1 Score=53.34 Aligned_cols=26 Identities=27% Similarity=0.348 Sum_probs=24.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD 757 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD 757 (1184)
++.+|+.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999985
No 155
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=62.57 E-value=43 Score=35.82 Aligned_cols=43 Identities=19% Similarity=0.270 Sum_probs=35.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CcHhHHHHHHHHcCcc
Q 001027 730 EDKLQQGVPEAIESLRAAGIKVWVLTG---DKQETAISIGYSSKLL 772 (1184)
Q Consensus 730 eD~lq~~v~e~I~~L~~aGIkv~mlTG---D~~eTAi~Ia~~~gl~ 772 (1184)
.+++-+++.++|+.|+++|++++++|| ..........+.+|+-
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 456668999999999999999999996 5566666677777774
No 156
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=61.99 E-value=15 Score=36.46 Aligned_cols=25 Identities=12% Similarity=0.299 Sum_probs=23.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGD 757 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD 757 (1184)
++.||+.++++.|++ ++++.++|+-
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 688999999999998 5999999996
No 157
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=60.42 E-value=4.7 Score=41.49 Aligned_cols=41 Identities=10% Similarity=-0.009 Sum_probs=37.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
=++|||+.+.++.|++. +++.+.|.-..+.|..+...+++-
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 47899999999999998 999999999999999999988763
No 158
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=53.01 E-value=3.8 Score=41.54 Aligned_cols=41 Identities=10% Similarity=-0.006 Sum_probs=37.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
=++|||+.+.++.|++. +++.+.|.-....|..+...++.-
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 36899999999999998 999999999999999999888763
No 159
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=51.82 E-value=4.3 Score=41.23 Aligned_cols=41 Identities=12% Similarity=0.159 Sum_probs=35.7
Q ss_pred ccCCCChHHHHHHHHHc-CCeEEEEcCCcHhHHHHHHHHcCc
Q 001027 731 DKLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKL 771 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~a-GIkv~mlTGD~~eTAi~Ia~~~gl 771 (1184)
-++.||+.++++.|+++ |+++.++|+-....+..+...+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 46889999999999999 999999999988777777777666
No 160
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=42.51 E-value=15 Score=39.29 Aligned_cols=35 Identities=6% Similarity=0.005 Sum_probs=28.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc
Q 001027 731 DKLQQGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS 769 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~ 769 (1184)
-++.+|+.++++. |+++.++|.-....+..+-..+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 3667888888877 9999999999988777665554
No 161
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=42.36 E-value=8.4 Score=39.15 Aligned_cols=42 Identities=12% Similarity=0.046 Sum_probs=35.0
Q ss_pred ccCCCChHHHHHHHHHc-CCeEEEEcCCcHhHHHHHHHHcCcc
Q 001027 731 DKLQQGVPEAIESLRAA-GIKVWVLTGDKQETAISIGYSSKLL 772 (1184)
Q Consensus 731 D~lq~~v~e~I~~L~~a-GIkv~mlTGD~~eTAi~Ia~~~gl~ 772 (1184)
-++.+|+.++++.|++. |+++.++|+-....+..+-...|+.
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 116 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV 116 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH
Confidence 36889999999999999 9999999998877666666666654
No 162
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=37.80 E-value=16 Score=34.26 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=26.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCcHhH
Q 001027 732 KLQQGVPEAIESLRAAGIKVWVLTGDKQET 761 (1184)
Q Consensus 732 ~lq~~v~e~I~~L~~aGIkv~mlTGD~~eT 761 (1184)
++.+++.++|+.|++.|+++.++||.....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 466889999999999999999999998654
No 163
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=37.03 E-value=29 Score=39.08 Aligned_cols=48 Identities=19% Similarity=0.108 Sum_probs=37.5
Q ss_pred EeecccccCCCChHHHHHHHHHcCCeEEEEcCCc----HhHHHHHHHHcCcc
Q 001027 725 GASGIEDKLQQGVPEAIESLRAAGIKVWVLTGDK----QETAISIGYSSKLL 772 (1184)
Q Consensus 725 G~~~ieD~lq~~v~e~I~~L~~aGIkv~mlTGD~----~eTAi~Ia~~~gl~ 772 (1184)
|.+.-.+.+-+++.++|+.|+++|+++.++|+.. .+.+....+.+|+-
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 5555567778999999999999999999999875 34455565567773
No 164
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=35.40 E-value=30 Score=35.04 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=29.8
Q ss_pred cceEEEEECCeEEEEeeeccccccEEEEcCCCccCC
Q 001027 176 NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPC 211 (1184)
Q Consensus 176 ~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPA 211 (1184)
+-+..+.++|.++.++.++|++||.|.+..+..++.
T Consensus 102 ~Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~~~~~~ 137 (186)
T 2jmz_A 102 DHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINL 137 (186)
T ss_dssp TCEEEEEETTEEEEEEGGGCCTTSEEEEECSSSEEE
T ss_pred CCEEEEeCCCeEEEEEhhcCCCCCEEEecccCCccc
Confidence 567788889999999999999999999877654443
No 165
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=31.70 E-value=50 Score=33.27 Aligned_cols=36 Identities=19% Similarity=0.278 Sum_probs=30.5
Q ss_pred cceEEEEECCeEEEEeeeccccccEEEEcCCCccCC
Q 001027 176 NRLANVLVNNQFQEKKWKDIRVGEIIKIKTNETIPC 211 (1184)
Q Consensus 176 ~~~~~V~r~g~~~~i~~~~L~vGDIV~v~~ge~iPA 211 (1184)
+.+..+.++|....++.++|++||.|.+..++.-|-
T Consensus 92 ~H~~~v~~~g~~~~~~A~eLk~GD~v~v~~~~~~~~ 127 (185)
T 2lcj_A 92 DHPVLVYENGRFIEKRAFEVKEGDKVLVSELELVEQ 127 (185)
T ss_dssp SSEEEEEETTEEEEEEGGGCCTTCEEEECCCCCSCC
T ss_pred CCEEEEecCCeEEEEEHHHCCCCCEEEEcccccccc
Confidence 566778889999999999999999999988775553
No 166
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.13 E-value=46 Score=31.72 Aligned_cols=80 Identities=11% Similarity=0.087 Sum_probs=52.5
Q ss_pred HHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHHHHHHc
Q 001027 668 AYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIESLRAA 747 (1184)
Q Consensus 668 ~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~~L~~a 747 (1184)
-+...|++|+-++. ..+.+++.+- ..|.+-.++|+.+.-..--+.+++.++.|+++
T Consensus 26 ~l~~~G~~Vi~lG~-~~p~e~~v~~-----------------------a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~ 81 (137)
T 1ccw_A 26 AFTNAGFNVVNIGV-LSPQELFIKA-----------------------AIETKADAILVSSLYGQGEIDCKGLRQKCDEA 81 (137)
T ss_dssp HHHHTTCEEEEEEE-EECHHHHHHH-----------------------HHHHTCSEEEEEECSSTHHHHHTTHHHHHHHT
T ss_pred HHHHCCCEEEECCC-CCCHHHHHHH-----------------------HHhcCCCEEEEEecCcCcHHHHHHHHHHHHhc
Confidence 45679999999987 5666654432 22346677777777777777889999999998
Q ss_pred CC--eEEEEcCCc------HhHHHHHHHHcCc
Q 001027 748 GI--KVWVLTGDK------QETAISIGYSSKL 771 (1184)
Q Consensus 748 GI--kv~mlTGD~------~eTAi~Ia~~~gl 771 (1184)
|. -.+++-|-- .......+++.|.
T Consensus 82 g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~ 113 (137)
T 1ccw_A 82 GLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY 113 (137)
T ss_dssp TCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCcCchHhhhhhHHHHHHCCC
Confidence 75 223444521 1222345777776
No 167
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.13 E-value=2.9e+02 Score=24.67 Aligned_cols=74 Identities=15% Similarity=0.180 Sum_probs=35.6
Q ss_pred HHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHHHH
Q 001027 663 ESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEAIE 742 (1184)
Q Consensus 663 ~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~I~ 742 (1184)
.+.+.+...+|.|++.+- ..-++.. |.+. .+++|+...=+-.+-=+...|++..+.-+
T Consensus 16 keivreikrqgvrvvlly-sdqdekr-----------------rrer----leefekqgvdvrtvedkedfrenireiwe 73 (162)
T 2l82_A 16 KEIVREIKRQGVRVVLLY-SDQDEKR-----------------RRER----LEEFEKQGVDVRTVEDKEDFRENIREIWE 73 (162)
T ss_dssp HHHHHHHHHTTCEEEEEE-CCSCHHH-----------------HHHH----HHHHHTTTCEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEEEe-cCchHHH-----------------HHHH----HHHHHHcCCceeeeccHHHHHHHHHHHHH
Confidence 344556667899987654 3333221 1111 23455555444433222334555555555
Q ss_pred HHHHcCCeEEEEcCCc
Q 001027 743 SLRAAGIKVWVLTGDK 758 (1184)
Q Consensus 743 ~L~~aGIkv~mlTGD~ 758 (1184)
..-+.++-|++-|.|+
T Consensus 74 rypqldvvvivttddk 89 (162)
T 2l82_A 74 RYPQLDVVVIVTTDDK 89 (162)
T ss_dssp HCTTCCEEEEEECCCH
T ss_pred hCCCCcEEEEEecCcH
Confidence 5555555555545444
No 168
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=25.72 E-value=1.2e+02 Score=36.04 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCcHhHHHHHHHHc-Cc
Q 001027 735 QGVPEAIESLRAAGIKVWVLTGDKQETAISIGYSS-KL 771 (1184)
Q Consensus 735 ~~v~e~I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~-gl 771 (1184)
+++++.+++||++| |+.++|.-+..-+-.++..+ |+
T Consensus 249 p~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 249 GKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp THHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 58899999999999 99999999999888888776 64
No 169
>1d1n_A Initiation factor 2; beta-barrel, gene regulation; NMR {Geobacillus stearothermophilus} SCOP: b.43.3.1
Probab=25.62 E-value=38 Score=30.48 Aligned_cols=21 Identities=19% Similarity=0.477 Sum_probs=17.4
Q ss_pred eeeccccccEEEEcCCCccCC
Q 001027 191 KWKDIRVGEIIKIKTNETIPC 211 (1184)
Q Consensus 191 ~~~~L~vGDIV~v~~ge~iPA 211 (1184)
.|.|+++||+|....-+.+|.
T Consensus 78 ~~~dik~GD~Ie~ye~~ev~r 98 (99)
T 1d1n_A 78 NFNDIKEGDVIEAYVMQEVAR 98 (99)
T ss_dssp TCSSCSSCSEEEEECCSCCCC
T ss_pred CcCCCCCCCEEEEEEEEEEcC
Confidence 588999999999887776663
No 170
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=23.97 E-value=41 Score=37.16 Aligned_cols=47 Identities=13% Similarity=0.017 Sum_probs=37.7
Q ss_pred ecccccCCCChHHHHHHHH-Hc----------CCeEEEEcCCcHhHHHHHHHHcCccC
Q 001027 727 SGIEDKLQQGVPEAIESLR-AA----------GIKVWVLTGDKQETAISIGYSSKLLT 773 (1184)
Q Consensus 727 ~~ieD~lq~~v~e~I~~L~-~a----------GIkv~mlTGD~~eTAi~Ia~~~gl~~ 773 (1184)
+.+..++-+...++|.++. .+ |+.+|++||+..+....++.+.|+-.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 38 IVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp EEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred EEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 3444566777788888888 33 79999999999999999999998854
No 171
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=23.68 E-value=5.4e+02 Score=28.55 Aligned_cols=154 Identities=21% Similarity=0.205 Sum_probs=93.7
Q ss_pred hhHHHHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCC
Q 001027 657 NVIRGTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQG 736 (1184)
Q Consensus 657 ~~~~~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~ 736 (1184)
...+...++++.+.+.|+.-++++.|.-+-.+.-+ .|. .+++....-| .+|+|---...+--
T Consensus 160 amVeSAl~~~~~~e~~gf~~iviS~K~S~v~~~i~---ayr--------------~la~~~dyPL-HlGvTEAG~~~~G~ 221 (366)
T 3noy_A 160 ALAESALRWSEKFEKWGFTNYKVSIKGSDVLQNVR---ANL--------------IFAERTDVPL-HIGITEAGMGTKGI 221 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHHHH---HHH--------------HHHHHCCCCE-EECCSSCCSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeeecCChHHHHH---HHH--------------HHHhccCCCE-EEccCCCCCCccee
Confidence 35566677778888899999999998755432211 111 1222333334 68887643322211
Q ss_pred --hHHHHHHHHHcCC--eEEE-EcCCcH---hHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHhhcccccCCC
Q 001027 737 --VPEAIESLRAAGI--KVWV-LTGDKQ---ETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAMSKKLKTVPG 808 (1184)
Q Consensus 737 --v~e~I~~L~~aGI--kv~m-lTGD~~---eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 808 (1184)
..-.|..|-..|| .+++ ||+|.. .+|..|-+++|+-....+++
T Consensus 222 ikSsigiG~LL~dGIGDTIRVSLt~~p~~Ev~va~~ILqslglR~~g~~~I----------------------------- 272 (366)
T 3noy_A 222 IKSSVGIGILLYMGIGDTVRVSLTDDPVVEVETAYEILKSLGLRRRGVEIV----------------------------- 272 (366)
T ss_dssp HHHHHHHHHHHHTTCCSEECCCCSSCHHHHHHHHHHHHHHTTSCCSSCEEE-----------------------------
T ss_pred eehHHHHHHHHHhcccceEEEeCCCCcHHHHHHHHHHHHhcCCCcCCCEEE-----------------------------
Confidence 2235567777788 4554 788864 34666777777754332211
Q ss_pred CCCCcCCCCCcCCCcEEEEEcCcchhhhcchHHHHHHHHHhccCCeeEEEecCcccHHHHHHHHHhc-----CCCeEEEE
Q 001027 809 VSHNSERSSGAGVAQLALIIDGTSLVYILDSELDEQLFQLAGTCSVVLCCRVAPLQKAGIVALVKTR-----TSDMTLAI 883 (1184)
Q Consensus 809 ~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vi~~r~sP~qK~~iV~~lk~~-----~g~~vl~i 883 (1184)
.|. -|.|..- +=..+++.++++ .+-+|+..
T Consensus 273 ------------------------------------------SCP--tCGRt~~-dl~~~~~~ie~~l~~~~~~lkVAVM 307 (366)
T 3noy_A 273 ------------------------------------------ACP--TCGRIEV-DLPKVVKEVQEKLSGVKTPLKVAVM 307 (366)
T ss_dssp ------------------------------------------ECC--CCTTCCS-CHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred ------------------------------------------ECC--CCCCccc-cHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 122 2345443 335555655544 35789999
Q ss_pred cCCcCChhhhhhcCeeEEe
Q 001027 884 GDGANDVSMIQMADVGVGI 902 (1184)
Q Consensus 884 GDG~NDv~mL~~AdVGI~i 902 (1184)
|==+|-.+-.+.||+||+-
T Consensus 308 GCvVNGPGEa~~ADiGiag 326 (366)
T 3noy_A 308 GCVVNAIGEAREADIGLAC 326 (366)
T ss_dssp SSSHHHHHHTTTCSEEEEE
T ss_pred cccccCCchhhhCCEeEec
Confidence 9999999999999999965
No 172
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=23.25 E-value=5.7e+02 Score=25.56 Aligned_cols=102 Identities=15% Similarity=0.219 Sum_probs=64.3
Q ss_pred HHHHHHHHHhhccCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhccCcEEEEeecccccCCCChHHH
Q 001027 661 GTESHLHAYSSLGLRTLVVGMRELSASEFEQWQSSFEAASNALFGRAALLRKVASSVENNLCILGASGIEDKLQQGVPEA 740 (1184)
Q Consensus 661 ~~~~~l~~~a~~GlRtL~~A~r~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dl~llG~~~ieD~lq~~v~e~ 740 (1184)
++.+.+......+-|+-+++|.....+- + .+.+.+.-++...-. .-.+++.++
T Consensus 82 Dil~al~~a~~~~~kIavvg~~~~~~~~-~---------------------~~~~ll~~~i~~~~~-----~~~~e~~~~ 134 (196)
T 2q5c_A 82 DTMRAVYNAKRFGNELALIAYKHSIVDK-H---------------------EIEAMLGVKIKEFLF-----SSEDEITTL 134 (196)
T ss_dssp HHHHHHHHHGGGCSEEEEEEESSCSSCH-H---------------------HHHHHHTCEEEEEEE-----CSGGGHHHH
T ss_pred HHHHHHHHHHhhCCcEEEEeCcchhhHH-H---------------------HHHHHhCCceEEEEe-----CCHHHHHHH
Confidence 3445555556667799999998875431 1 122233334444333 223677899
Q ss_pred HHHHHHcCCeEEEEcCCcHhHHHHHHHHcCccCCCceEEEEeCCChHHHHHHHHHHHHh
Q 001027 741 IESLRAAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQVIINSNSKESCRKSLEDAIAM 799 (1184)
Q Consensus 741 I~~L~~aGIkv~mlTGD~~eTAi~Ia~~~gl~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 799 (1184)
|++|++.|+++++ || .++..+|++.|+- .+.+. ...+.+...++++..-
T Consensus 135 i~~l~~~G~~vvV--G~--~~~~~~A~~~Gl~-----~vli~-sg~eSI~~Ai~eA~~l 183 (196)
T 2q5c_A 135 ISKVKTENIKIVV--SG--KTVTDEAIKQGLY-----GETIN-SGEESLRRAIEEALNL 183 (196)
T ss_dssp HHHHHHTTCCEEE--EC--HHHHHHHHHTTCE-----EEECC-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEE--CC--HHHHHHHHHcCCc-----EEEEe-cCHHHHHHHHHHHHHH
Confidence 9999999999977 33 3567889999973 23332 3466777777766543
No 173
>2crv_A IF-2MT, translation initiation factor IF-2; ribosome, beta barrel, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.18 E-value=79 Score=29.45 Aligned_cols=23 Identities=13% Similarity=0.318 Sum_probs=19.6
Q ss_pred eee-ccccccEEEEcCCCccCCce
Q 001027 191 KWK-DIRVGEIIKIKTNETIPCDM 213 (1184)
Q Consensus 191 ~~~-~L~vGDIV~v~~ge~iPAD~ 213 (1184)
.|. |+++||+|....-+.+|-.+
T Consensus 85 ~fniDik~GDiIE~ye~~ev~r~l 108 (120)
T 2crv_A 85 EEKVEFKPGDQVICYEENKVPTKT 108 (120)
T ss_dssp CTTSCCCTTEEEEEECCSCCCCCC
T ss_pred cCCCCCCCCCEEEEEEEEEEeeEe
Confidence 578 99999999999888888763
No 174
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=22.57 E-value=99 Score=33.47 Aligned_cols=69 Identities=13% Similarity=0.203 Sum_probs=45.3
Q ss_pred cccccCCCChHHHHHHHHHcCCe----EEEEcCCcHhHHH------HHHHHcCccCCCceEEEEeCC-ChHHHHHHHHHH
Q 001027 728 GIEDKLQQGVPEAIESLRAAGIK----VWVLTGDKQETAI------SIGYSSKLLTSKMTQVIINSN-SKESCRKSLEDA 796 (1184)
Q Consensus 728 ~ieD~lq~~v~e~I~~L~~aGIk----v~mlTGD~~eTAi------~Ia~~~gl~~~~~~~i~i~~~-~~~~~~~~~~~~ 796 (1184)
.+..++++++++-++.|++.|.+ ..++-||++.... ..|.++|+- ...+.+... +.+++...+++.
T Consensus 12 ~ia~~i~~~~~~~v~~l~~~~~~~P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~---~~~~~lp~~~s~~ell~~I~~l 88 (286)
T 4a5o_A 12 AIAANLRQQIAQRVTERRQQGLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFL---SQAYDLPAETSQDDLLALIDRL 88 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEESCCHHHHHHHHHHHHHHHHTTCE---EEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCe---EEEEECCCCCCHHHHHHHHHHH
Confidence 34567788888999999988744 5788899987643 346667773 344555433 455666666665
Q ss_pred HHh
Q 001027 797 IAM 799 (1184)
Q Consensus 797 ~~~ 799 (1184)
..+
T Consensus 89 N~d 91 (286)
T 4a5o_A 89 NDD 91 (286)
T ss_dssp HTC
T ss_pred hCC
Confidence 443
No 175
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=20.83 E-value=1e+02 Score=24.46 Aligned_cols=42 Identities=10% Similarity=0.130 Sum_probs=34.3
Q ss_pred ccccccEEEEcCCCccCCceEEeeecCCCCcEEEEeccCCCC
Q 001027 194 DIRVGEIIKIKTNETIPCDMVLLSTSDPTGVAYLQTINLDGE 235 (1184)
Q Consensus 194 ~L~vGDIV~v~~ge~iPAD~~lL~ss~~~g~~~Vdts~LtGE 235 (1184)
++.+||.|+|..|..-=-.+.+.+-+.+++.+.|.-+.+.-|
T Consensus 4 ~~~~Gd~V~V~~Gpf~g~~g~v~~v~~~k~~v~V~v~~~Gr~ 45 (58)
T 1nz9_A 4 AFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRE 45 (58)
T ss_dssp SCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEESSSSE
T ss_pred ccCCCCEEEEeecCCCCcEEEEEEEcCCCCEEEEEEEeCCCE
Confidence 578999999999998888999998877667888886655444
Done!