Query 001031
Match_columns 1183
No_of_seqs 605 out of 2994
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 07:26:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001031.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001031hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 4.2E-36 3.1E-40 327.4 21.7 229 941-1173 4-236 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 1E-35 7.4E-40 322.7 21.5 227 943-1173 3-233 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 1.3E-35 9.4E-40 323.2 18.7 226 946-1175 1-228 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 1.3E-34 9.6E-39 316.6 12.9 230 945-1177 3-236 (265)
5 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 8.2E-23 6E-27 220.5 11.8 168 981-1154 37-206 (246)
6 d1gxca_ b.26.1.2 (A:) Chk2 kin 99.8 3.8E-21 2.8E-25 185.1 12.9 106 133-239 1-116 (116)
7 d1ofha_ c.37.1.20 (A:) HslU {H 99.8 1.7E-20 1.3E-24 208.3 14.6 181 950-1130 15-212 (309)
8 d1w44a_ c.37.1.11 (A:) NTPase 99.8 8.7E-22 6.4E-26 219.6 0.9 160 969-1134 108-276 (321)
9 d1lv7a_ c.37.1.20 (A:) AAA dom 99.8 4.8E-19 3.5E-23 192.0 14.2 217 445-882 3-235 (256)
10 d1e32a2 c.37.1.20 (A:201-458) 99.8 4.6E-20 3.3E-24 199.8 5.9 241 451-912 1-257 (258)
11 d1in4a2 c.37.1.20 (A:17-254) H 99.8 5E-18 3.7E-22 179.2 20.5 202 946-1170 6-215 (238)
12 d1lgpa_ b.26.1.2 (A:) Cell cyc 99.7 3.6E-18 2.7E-22 163.3 10.2 103 132-237 2-112 (113)
13 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.7 6.9E-17 5.1E-21 170.6 20.9 200 946-1167 6-213 (239)
14 d1ixza_ c.37.1.20 (A:) AAA dom 99.7 7.9E-18 5.7E-22 181.4 8.4 214 448-883 3-233 (247)
15 d1r7ra3 c.37.1.20 (A:471-735) 99.7 3.3E-18 2.4E-22 185.9 4.5 216 450-886 3-235 (265)
16 d1iqpa2 c.37.1.20 (A:2-232) Re 99.7 4.4E-16 3.2E-20 163.6 18.3 188 945-1166 20-215 (231)
17 d1njfa_ c.37.1.20 (A:) delta p 99.6 9.3E-15 6.7E-19 155.3 19.6 185 946-1167 9-222 (239)
18 d1sxjc2 c.37.1.20 (C:12-238) R 99.6 7E-15 5.1E-19 153.7 17.4 187 945-1163 10-202 (227)
19 d1sxja2 c.37.1.20 (A:295-547) 99.6 3.5E-14 2.6E-18 150.0 20.3 190 945-1152 10-218 (253)
20 d1sxjb2 c.37.1.20 (B:7-230) Re 99.5 2.6E-14 1.9E-18 149.5 16.4 182 945-1164 11-205 (224)
21 d1sxjd2 c.37.1.20 (D:26-262) R 99.5 8.3E-14 6.1E-18 145.5 19.2 190 945-1168 8-216 (237)
22 d1sxje2 c.37.1.20 (E:4-255) Re 99.5 1.4E-13 9.8E-18 145.2 18.8 178 945-1152 7-225 (252)
23 d1r6bx2 c.37.1.20 (X:169-436) 99.4 2.4E-12 1.8E-16 139.7 18.9 197 947-1168 16-240 (268)
24 d1l8qa2 c.37.1.20 (A:77-289) C 99.4 1.6E-11 1.2E-15 128.7 21.4 193 945-1166 6-211 (213)
25 d1r6bx3 c.37.1.20 (X:437-751) 99.3 5.6E-12 4.1E-16 139.6 18.0 208 950-1174 23-284 (315)
26 d1fnna2 c.37.1.20 (A:1-276) CD 99.3 1.6E-11 1.1E-15 128.9 20.5 205 948-1172 15-256 (276)
27 d1jbka_ c.37.1.20 (A:) ClpB, A 99.3 1.4E-12 1.1E-16 135.1 10.7 156 948-1128 21-194 (195)
28 d1qvra3 c.37.1.20 (A:536-850) 99.3 7E-12 5.1E-16 139.0 16.4 209 950-1175 24-290 (315)
29 d1a5ta2 c.37.1.20 (A:1-207) de 99.3 4E-11 2.9E-15 124.8 18.4 169 953-1158 6-202 (207)
30 d1g6ga_ b.26.1.2 (A:) Phosphot 99.3 8.7E-12 6.3E-16 121.0 12.1 97 134-234 5-118 (127)
31 d1w5sa2 c.37.1.20 (A:7-293) CD 99.3 3.3E-11 2.4E-15 127.1 17.0 215 948-1172 15-270 (287)
32 d1svma_ c.37.1.20 (A:) Papillo 99.2 3.7E-12 2.7E-16 143.8 8.7 174 985-1174 155-339 (362)
33 d1dmza_ b.26.1.2 (A:) Phosphot 99.2 9.5E-12 6.9E-16 125.1 10.3 92 134-226 5-111 (158)
34 d1qvra2 c.37.1.20 (A:149-535) 99.2 4.2E-11 3.1E-15 136.1 16.9 197 947-1168 20-243 (387)
35 d1um8a_ c.37.1.20 (A:) ClpX {H 99.2 4.1E-11 3E-15 135.2 16.1 221 950-1170 18-336 (364)
36 d2brfa1 b.26.1.2 (A:8-108) Pol 99.2 2.7E-11 1.9E-15 113.1 10.9 92 135-232 1-96 (101)
37 d1g41a_ c.37.1.20 (A:) HslU {H 99.2 2.6E-10 1.9E-14 131.7 21.3 77 950-1026 15-92 (443)
38 d1g8pa_ c.37.1.20 (A:) ATPase 99.2 2.8E-11 2.1E-15 133.9 12.3 161 946-1128 4-211 (333)
39 d2piea1 b.26.1.2 (A:13-139) Ub 99.1 1E-10 7.6E-15 113.3 11.2 101 133-238 5-115 (127)
40 d2ff4a3 b.26.1.2 (A:284-382) P 99.1 1.8E-10 1.3E-14 106.9 11.8 91 133-234 5-96 (99)
41 d2affa1 b.26.1.2 (A:3-100) Ant 99.0 4.6E-10 3.3E-14 103.7 10.7 82 144-235 15-97 (98)
42 d1uhta_ b.26.1.2 (A:) FHA doma 99.0 3.5E-10 2.5E-14 108.2 9.4 76 151-234 32-109 (118)
43 d1mzka_ b.26.1.2 (A:) Kinase a 98.9 8.4E-10 6.1E-14 106.0 8.6 73 153-228 31-112 (122)
44 d1ny5a2 c.37.1.20 (A:138-384) 98.9 2.3E-09 1.6E-13 114.5 12.2 197 951-1169 2-233 (247)
45 d2g1la1 b.26.1.2 (A:498-599) K 98.8 6.9E-09 5E-13 96.4 10.8 80 149-234 21-101 (102)
46 d2gnoa2 c.37.1.20 (A:11-208) g 98.7 2.4E-08 1.8E-12 103.1 12.9 116 984-1121 15-140 (198)
47 d1d2na_ c.37.1.20 (A:) Hexamer 98.7 1.9E-09 1.4E-13 115.0 3.0 35 493-529 41-75 (246)
48 d1gvnb_ c.37.1.21 (B:) Plasmid 98.7 9E-10 6.6E-14 116.0 -0.5 67 946-1022 4-70 (273)
49 d2fnaa2 c.37.1.20 (A:1-283) Ar 98.6 2.6E-06 1.9E-10 88.3 23.3 187 946-1165 9-252 (283)
50 d1w44a_ c.37.1.11 (A:) NTPase 98.6 4.5E-09 3.3E-13 116.2 1.5 90 690-842 173-275 (321)
51 d1wlna1 b.26.1.2 (A:8-114) Afa 98.5 9.2E-08 6.7E-12 89.6 9.2 79 148-235 25-106 (107)
52 d1ofha_ c.37.1.20 (A:) HslU {H 98.4 2.3E-08 1.7E-12 109.7 2.0 66 462-530 20-85 (309)
53 d1ye8a1 c.37.1.11 (A:1-178) Hy 97.9 1.3E-05 9.2E-10 78.5 8.9 26 986-1011 2-27 (178)
54 d1kaga_ c.37.1.2 (A:) Shikimat 97.5 3E-05 2.2E-09 73.4 4.4 32 985-1016 3-34 (169)
55 d1lw7a2 c.37.1.1 (A:220-411) T 97.5 3.5E-05 2.5E-09 74.5 4.5 35 985-1019 8-42 (192)
56 d2a5yb3 c.37.1.20 (B:109-385) 97.4 0.00067 4.9E-08 72.2 15.1 186 932-1161 9-228 (277)
57 d1in4a2 c.37.1.20 (A:17-254) H 97.4 0.00021 1.5E-08 73.4 9.7 64 452-529 7-70 (238)
58 d1rkba_ c.37.1.1 (A:) Adenylat 97.3 7.8E-05 5.7E-09 71.8 4.5 31 985-1015 5-35 (173)
59 d1zp6a1 c.37.1.25 (A:6-181) Hy 97.1 8.6E-05 6.3E-09 71.8 3.0 35 985-1019 5-39 (176)
60 d1viaa_ c.37.1.2 (A:) Shikimat 97.1 0.00011 7.9E-09 72.0 3.3 31 986-1016 2-32 (161)
61 d1e6ca_ c.37.1.2 (A:) Shikimat 97.0 0.00015 1.1E-08 71.1 3.5 31 985-1015 3-33 (170)
62 d1sxja2 c.37.1.20 (A:295-547) 97.0 0.00071 5.2E-08 69.6 8.8 76 452-531 12-89 (253)
63 d1qhxa_ c.37.1.3 (A:) Chloramp 97.0 0.00025 1.8E-08 68.2 4.7 33 985-1017 4-36 (178)
64 d2iyva1 c.37.1.2 (A:2-166) Shi 96.9 0.00017 1.3E-08 70.4 3.4 31 986-1016 3-33 (165)
65 d2i3ba1 c.37.1.11 (A:1-189) Ca 96.9 0.00033 2.4E-08 67.4 4.8 24 985-1008 2-25 (189)
66 d2bdta1 c.37.1.25 (A:1-176) Hy 96.9 0.00028 2E-08 67.4 4.0 28 986-1013 4-31 (176)
67 d1knqa_ c.37.1.17 (A:) Glucona 96.8 0.00032 2.3E-08 67.6 4.2 32 985-1016 7-38 (171)
68 d1tf7a2 c.37.1.11 (A:256-497) 96.8 0.0047 3.5E-07 62.8 12.9 74 984-1057 26-130 (242)
69 d1y63a_ c.37.1.1 (A:) Probable 96.7 0.00051 3.7E-08 66.2 4.9 27 984-1010 5-31 (174)
70 d1zaka1 c.37.1.1 (A:3-127,A:15 96.7 0.00036 2.6E-08 69.4 3.6 32 984-1015 3-34 (189)
71 d1zina1 c.37.1.1 (A:1-125,A:16 96.7 0.00053 3.9E-08 67.0 4.7 30 986-1015 2-31 (182)
72 d1p9ra_ c.37.1.11 (A:) Extrace 96.6 0.0025 1.8E-07 71.4 10.6 96 943-1053 132-237 (401)
73 d1ak2a1 c.37.1.1 (A:14-146,A:1 96.6 0.00067 4.9E-08 67.3 4.9 31 985-1015 4-34 (190)
74 d2qy9a2 c.37.1.10 (A:285-495) 96.6 0.0068 5E-07 62.3 12.7 135 983-1124 8-169 (211)
75 d1qf9a_ c.37.1.1 (A:) UMP/CMP 96.5 0.00071 5.2E-08 67.2 4.5 30 985-1014 7-36 (194)
76 d1m8pa3 c.37.1.15 (A:391-573) 96.5 0.00036 2.6E-08 67.0 2.1 26 985-1010 7-32 (183)
77 d2cdna1 c.37.1.1 (A:1-181) Ade 96.4 0.00093 6.7E-08 65.7 4.6 30 986-1015 2-31 (181)
78 d1okkd2 c.37.1.10 (D:97-303) G 96.4 0.0068 5E-07 62.1 11.4 71 985-1055 7-100 (207)
79 d1teva_ c.37.1.1 (A:) UMP/CMP 96.4 0.001 7.5E-08 65.9 4.7 30 985-1014 2-31 (194)
80 d1s3ga1 c.37.1.1 (A:1-125,A:16 96.4 0.0011 8.1E-08 65.3 4.7 30 986-1015 2-31 (182)
81 d1ukza_ c.37.1.1 (A:) Uridylat 96.4 0.00099 7.2E-08 66.4 4.3 31 985-1015 9-39 (196)
82 d1r6bx2 c.37.1.20 (X:169-436) 96.4 0.0014 1E-07 69.9 5.8 84 690-817 99-188 (268)
83 d2ak3a1 c.37.1.1 (A:0-124,A:16 96.3 0.0014 1E-07 65.7 5.3 31 985-1015 7-37 (189)
84 d1ckea_ c.37.1.1 (A:) CMP kina 96.3 0.001 7.6E-08 66.5 4.4 29 986-1014 5-33 (225)
85 d1akya1 c.37.1.1 (A:3-130,A:16 96.3 0.0012 8.8E-08 65.1 4.7 31 985-1015 3-33 (180)
86 d3adka_ c.37.1.1 (A:) Adenylat 96.3 0.0013 9.3E-08 65.6 4.6 31 985-1015 9-39 (194)
87 d1u94a1 c.37.1.11 (A:6-268) Re 96.2 0.0053 3.9E-07 65.0 9.5 73 985-1057 55-146 (263)
88 d1x6va3 c.37.1.4 (A:34-228) Ad 96.2 0.00043 3.1E-08 68.0 0.8 28 985-1012 20-47 (195)
89 d1vmaa2 c.37.1.10 (A:82-294) G 96.2 0.01 7.5E-07 60.9 11.2 36 983-1018 10-48 (213)
90 d1bifa1 c.37.1.7 (A:37-249) 6- 96.2 0.0031 2.3E-07 62.3 7.0 32 986-1017 4-38 (213)
91 d1e4va1 c.37.1.1 (A:1-121,A:15 96.2 0.0015 1.1E-07 64.0 4.5 30 986-1015 2-31 (179)
92 d1q3ta_ c.37.1.1 (A:) CMP kina 96.1 0.0017 1.2E-07 65.4 4.4 29 986-1014 5-33 (223)
93 d1tf7a1 c.37.1.11 (A:14-255) C 96.0 0.021 1.5E-06 56.7 11.9 76 983-1058 25-140 (242)
94 d1j8yf2 c.37.1.10 (F:87-297) G 95.9 0.022 1.6E-06 58.3 11.8 72 983-1054 11-105 (211)
95 d1ly1a_ c.37.1.1 (A:) Polynucl 95.8 0.002 1.5E-07 60.7 3.4 31 986-1017 4-34 (152)
96 d1tuea_ c.37.1.20 (A:) Replica 95.8 0.0096 7E-07 60.7 8.5 30 985-1014 54-83 (205)
97 d1ixsb2 c.37.1.20 (B:4-242) Ho 95.8 0.0048 3.5E-07 63.0 6.2 64 452-529 7-70 (239)
98 d1xp8a1 c.37.1.11 (A:15-282) R 95.7 0.022 1.6E-06 60.4 11.5 75 985-1059 58-151 (268)
99 d1a1va1 c.37.1.14 (A:190-325) 95.7 0.02 1.4E-06 53.3 10.0 33 985-1017 9-41 (136)
100 d1yksa1 c.37.1.14 (A:185-324) 95.6 0.0085 6.2E-07 54.8 6.8 20 983-1002 6-25 (140)
101 d1yj5a2 c.37.1.1 (A:351-522) 5 95.6 0.0033 2.4E-07 62.1 3.9 32 983-1014 13-44 (172)
102 d1cr2a_ c.37.1.11 (A:) Gene 4 95.5 0.03 2.2E-06 58.0 11.6 36 982-1017 33-72 (277)
103 d1ls1a2 c.37.1.10 (A:89-295) G 95.5 0.069 5E-06 54.3 13.7 35 985-1019 11-48 (207)
104 d1g6oa_ c.37.1.11 (A:) Hexamer 95.4 0.01 7.3E-07 64.6 7.3 69 985-1053 167-245 (323)
105 d1qvra2 c.37.1.20 (A:149-535) 95.4 0.0073 5.3E-07 67.4 6.3 73 703-817 114-191 (387)
106 d1np6a_ c.37.1.10 (A:) Molybdo 95.3 0.0067 4.9E-07 57.6 4.9 31 986-1016 4-37 (170)
107 d1jbka_ c.37.1.20 (A:) ClpB, A 95.2 0.0055 4E-07 62.3 4.2 73 703-816 114-191 (195)
108 d1khta_ c.37.1.1 (A:) Adenylat 95.1 0.0068 5E-07 58.0 4.5 24 986-1009 3-26 (190)
109 d1wb9a2 c.37.1.12 (A:567-800) 94.9 0.088 6.4E-06 54.3 12.6 23 985-1007 42-64 (234)
110 d1sxje2 c.37.1.20 (E:4-255) Re 94.8 0.15 1.1E-05 51.4 14.0 40 704-746 131-170 (252)
111 d1w36d1 c.37.1.19 (D:2-360) Ex 94.7 0.025 1.8E-06 62.2 8.3 20 986-1005 165-184 (359)
112 d1nksa_ c.37.1.1 (A:) Adenylat 94.6 0.012 8.6E-07 56.6 4.7 31 986-1016 3-36 (194)
113 d1mo6a1 c.37.1.11 (A:1-269) Re 94.6 0.038 2.8E-06 58.5 9.1 73 985-1057 61-152 (269)
114 d1szpa2 c.37.1.11 (A:145-395) 94.6 0.043 3.1E-06 54.6 9.0 75 983-1057 33-143 (251)
115 d1m7ga_ c.37.1.4 (A:) Adenosin 94.5 0.012 8.4E-07 59.9 4.5 36 985-1020 25-64 (208)
116 d1g41a_ c.37.1.20 (A:) HslU {H 94.2 0.015 1.1E-06 65.8 5.1 65 462-530 20-85 (443)
117 d1u0ja_ c.37.1.20 (A:) Rep 40 93.7 0.042 3.1E-06 58.0 7.1 55 985-1054 105-159 (267)
118 d1rz3a_ c.37.1.6 (A:) Hypothet 93.3 0.032 2.3E-06 53.9 5.0 30 987-1016 25-57 (198)
119 d2fh5b1 c.37.1.8 (B:63-269) Si 93.2 0.23 1.7E-05 48.8 11.3 23 985-1007 1-23 (207)
120 d1nlfa_ c.37.1.11 (A:) Hexamer 93.2 0.1 7.5E-06 53.5 9.0 26 983-1008 28-53 (274)
121 d1lvga_ c.37.1.1 (A:) Guanylat 93.1 0.031 2.3E-06 55.4 4.5 28 986-1013 2-29 (190)
122 d1gkya_ c.37.1.1 (A:) Guanylat 93.0 0.028 2.1E-06 55.4 4.1 27 986-1012 3-29 (186)
123 d2fz4a1 c.37.1.19 (A:24-229) D 93.0 0.11 8.2E-06 51.9 8.6 32 986-1017 87-118 (206)
124 d1ewqa2 c.37.1.12 (A:542-765) 92.8 0.23 1.6E-05 50.9 10.7 22 986-1007 37-58 (224)
125 d1um8a_ c.37.1.20 (A:) ClpX {H 92.2 0.051 3.7E-06 59.8 5.2 78 435-531 11-105 (364)
126 d1r8sa_ c.37.1.8 (A:) ADP-ribo 92.2 0.26 1.9E-05 45.4 9.7 23 986-1008 2-24 (160)
127 d1lw7a2 c.37.1.1 (A:220-411) T 92.1 0.028 2.1E-06 53.2 2.6 36 492-529 7-42 (192)
128 d1wf3a1 c.37.1.8 (A:3-180) GTP 92.1 0.69 5E-05 44.1 12.9 22 986-1007 7-28 (178)
129 d1n0wa_ c.37.1.11 (A:) DNA rep 92.0 0.044 3.2E-06 52.6 3.9 27 982-1008 21-47 (242)
130 d2gj8a1 c.37.1.8 (A:216-376) P 92.0 0.25 1.8E-05 46.2 9.2 21 986-1006 3-23 (161)
131 d1zd9a1 c.37.1.8 (A:18-181) AD 91.9 0.28 2E-05 46.4 9.6 22 986-1007 4-25 (164)
132 d1xjca_ c.37.1.10 (A:) Molybdo 91.8 0.071 5.2E-06 51.0 5.1 30 987-1016 4-36 (165)
133 d1ksha_ c.37.1.8 (A:) ADP-ribo 91.8 0.1 7.5E-06 49.4 6.2 22 986-1007 4-25 (165)
134 d1uj2a_ c.37.1.6 (A:) Uridine- 91.4 0.049 3.6E-06 54.2 3.5 26 986-1011 4-29 (213)
135 d1znwa1 c.37.1.1 (A:20-201) Gu 90.8 0.06 4.3E-06 52.5 3.4 24 986-1009 4-27 (182)
136 d1v5wa_ c.37.1.11 (A:) Meiotic 90.6 0.085 6.2E-06 52.8 4.5 27 982-1008 35-61 (258)
137 d1pzna2 c.37.1.11 (A:96-349) D 90.6 0.06 4.4E-06 54.1 3.3 24 985-1008 37-60 (254)
138 d1htwa_ c.37.1.18 (A:) Hypothe 90.6 0.091 6.7E-06 51.3 4.4 29 983-1011 32-60 (158)
139 d1nrjb_ c.37.1.8 (B:) Signal r 90.5 0.4 2.9E-05 46.5 9.4 22 986-1007 5-26 (209)
140 d1wp9a1 c.37.1.19 (A:1-200) pu 90.4 0.67 4.9E-05 44.9 10.9 31 986-1016 25-59 (200)
141 d2p6ra3 c.37.1.19 (A:1-202) He 90.4 0.69 5E-05 45.3 11.1 18 985-1002 41-58 (202)
142 d1h65a_ c.37.1.8 (A:) Chloropl 89.8 0.31 2.3E-05 50.3 8.3 24 984-1007 32-55 (257)
143 d1uf9a_ c.37.1.1 (A:) Dephosph 89.6 0.13 9.1E-06 50.2 4.7 29 985-1014 4-32 (191)
144 d1u8za_ c.37.1.8 (A:) Ras-rela 89.5 0.34 2.5E-05 46.2 7.6 24 983-1006 3-26 (168)
145 d1yrba1 c.37.1.10 (A:1-244) AT 89.5 0.13 9.8E-06 51.2 4.9 30 987-1016 3-34 (244)
146 d1zj6a1 c.37.1.8 (A:2-178) ADP 89.4 0.36 2.6E-05 45.6 7.7 23 985-1007 16-38 (177)
147 d1kkma_ c.91.1.2 (A:) HPr kina 89.3 0.11 8.4E-06 51.4 4.1 30 984-1014 14-43 (176)
148 d1ctqa_ c.37.1.8 (A:) cH-p21 R 89.1 0.24 1.7E-05 47.0 6.1 22 986-1007 5-26 (166)
149 d1fzqa_ c.37.1.8 (A:) ADP-ribo 89.1 0.33 2.4E-05 46.0 7.3 22 985-1006 17-38 (176)
150 d1e0sa_ c.37.1.8 (A:) ADP-ribo 88.4 0.65 4.7E-05 44.1 8.8 22 985-1006 13-34 (173)
151 d2i1qa2 c.37.1.11 (A:65-322) D 88.4 0.11 8.1E-06 51.3 3.3 26 983-1008 33-58 (258)
152 d1gsia_ c.37.1.1 (A:) Thymidyl 88.2 0.21 1.5E-05 48.8 5.2 32 987-1018 3-37 (208)
153 d2f7sa1 c.37.1.8 (A:5-190) Rab 88.0 1.2 8.4E-05 42.7 10.6 21 986-1006 7-27 (186)
154 d1nn5a_ c.37.1.1 (A:) Thymidyl 88.0 0.2 1.5E-05 50.2 5.0 31 987-1017 6-39 (209)
155 d1r6bx3 c.37.1.20 (X:437-751) 88.0 0.38 2.8E-05 51.3 7.5 73 435-530 16-88 (315)
156 d1pjra1 c.37.1.19 (A:1-318) DE 87.8 0.13 9.5E-06 53.8 3.6 24 985-1008 25-49 (318)
157 d1veca_ c.37.1.19 (A:) DEAD bo 87.5 0.77 5.6E-05 45.6 9.1 51 946-999 3-55 (206)
158 d1sq5a_ c.37.1.6 (A:) Pantothe 87.5 0.3 2.2E-05 52.3 6.3 40 981-1020 77-121 (308)
159 d1ko7a2 c.91.1.2 (A:130-298) H 87.3 0.18 1.3E-05 49.6 3.9 29 984-1013 15-43 (169)
160 d2bmfa2 c.37.1.14 (A:178-482) 87.2 0.29 2.1E-05 50.5 5.8 17 983-999 8-24 (305)
161 d1uaaa1 c.37.1.19 (A:2-307) DE 87.2 0.14 1E-05 52.9 3.3 22 985-1006 15-37 (306)
162 d1knxa2 c.91.1.2 (A:133-309) H 87.2 0.16 1.1E-05 50.5 3.4 30 984-1014 15-44 (177)
163 d1odfa_ c.37.1.6 (A:) Hypothet 87.2 0.44 3.2E-05 50.5 7.2 36 985-1020 28-69 (286)
164 d2vp4a1 c.37.1.1 (A:12-208) De 86.9 0.15 1.1E-05 49.7 3.1 30 984-1013 9-38 (197)
165 d1kgda_ c.37.1.1 (A:) Guanylat 86.9 0.2 1.5E-05 49.0 4.1 24 985-1008 4-27 (178)
166 d1gm5a3 c.37.1.19 (A:286-549) 86.7 2.5 0.00018 43.9 12.9 34 985-1018 105-141 (264)
167 d1gvnb_ c.37.1.21 (B:) Plasmid 86.6 0.08 5.9E-06 53.8 0.9 35 494-530 34-68 (273)
168 d2qtvb1 c.37.1.8 (B:24-189) SA 86.5 0.18 1.3E-05 46.4 3.2 22 986-1007 2-23 (166)
169 d2b8ta1 c.37.1.24 (A:11-149) T 86.5 1.4 0.0001 41.5 9.7 30 988-1017 6-38 (139)
170 d1z06a1 c.37.1.8 (A:32-196) Ra 86.4 1.3 9.8E-05 41.2 9.7 22 986-1007 4-25 (165)
171 d1wmsa_ c.37.1.8 (A:) Rab9a {H 86.3 0.84 6.1E-05 43.3 8.3 22 986-1007 8-29 (174)
172 d1vhta_ c.37.1.1 (A:) Dephosph 86.3 0.17 1.2E-05 50.6 3.1 28 987-1015 6-33 (208)
173 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 86.2 0.16 1.2E-05 47.9 2.9 23 984-1006 13-35 (186)
174 d1l8qa2 c.37.1.20 (A:77-289) C 86.1 0.31 2.2E-05 49.1 5.1 58 449-520 5-62 (213)
175 d1jjva_ c.37.1.1 (A:) Dephosph 86.1 0.15 1.1E-05 50.6 2.7 28 987-1015 5-32 (205)
176 d1upta_ c.37.1.8 (A:) ADP-ribo 86.0 0.2 1.5E-05 46.4 3.4 23 985-1007 6-28 (169)
177 d1s96a_ c.37.1.1 (A:) Guanylat 85.2 0.22 1.6E-05 50.1 3.4 24 986-1009 4-27 (205)
178 d2p67a1 c.37.1.10 (A:1-327) LA 85.2 1.2 9E-05 47.6 9.8 25 984-1008 54-78 (327)
179 d2gjsa1 c.37.1.8 (A:91-258) Ra 84.6 0.71 5.2E-05 43.7 6.8 21 986-1006 3-23 (168)
180 d2ocpa1 c.37.1.1 (A:37-277) De 84.0 0.36 2.6E-05 48.3 4.5 29 984-1012 2-30 (241)
181 d1azta2 c.37.1.8 (A:35-65,A:20 83.9 0.77 5.6E-05 45.9 6.9 34 985-1018 7-45 (221)
182 d4tmka_ c.37.1.1 (A:) Thymidyl 83.7 0.27 1.9E-05 48.7 3.2 23 986-1008 4-26 (210)
183 d2a5ja1 c.37.1.8 (A:9-181) Rab 83.5 0.28 2.1E-05 46.8 3.2 22 986-1007 5-26 (173)
184 d1deka_ c.37.1.1 (A:) Deoxynuc 83.3 0.26 1.9E-05 49.6 3.0 28 986-1013 3-30 (241)
185 d2dy1a2 c.37.1.8 (A:8-274) Elo 83.3 11 0.0008 38.8 16.0 24 985-1008 3-26 (267)
186 d1e9ra_ c.37.1.11 (A:) Bacteri 83.1 0.4 2.9E-05 52.3 4.7 33 985-1017 51-86 (433)
187 d2qm8a1 c.37.1.10 (A:5-327) Me 83.0 1.8 0.00013 46.2 9.9 34 985-1018 52-90 (323)
188 d1sgwa_ c.37.1.12 (A:) Putativ 81.8 0.28 2.1E-05 49.1 2.5 24 985-1008 28-51 (200)
189 d1z0fa1 c.37.1.8 (A:8-173) Rab 81.8 0.36 2.7E-05 45.6 3.2 22 986-1007 6-27 (166)
190 d1tmka_ c.37.1.1 (A:) Thymidyl 81.7 0.55 4E-05 47.0 4.7 32 986-1017 5-36 (214)
191 d1zcba2 c.37.1.8 (A:47-75,A:20 81.6 0.87 6.4E-05 43.6 6.1 19 986-1004 4-22 (200)
192 d1z2aa1 c.37.1.8 (A:8-171) Rab 81.5 0.38 2.8E-05 45.4 3.2 21 986-1006 4-24 (164)
193 d1kaoa_ c.37.1.8 (A:) Rap2a {H 80.9 0.4 2.9E-05 45.3 3.2 22 986-1007 5-26 (167)
194 d3raba_ c.37.1.8 (A:) Rab3a {R 80.9 0.41 3E-05 45.5 3.2 22 986-1007 7-28 (169)
195 d1rkba_ c.37.1.1 (A:) Adenylat 80.7 0.32 2.3E-05 45.4 2.4 32 493-526 5-36 (173)
196 d1i2ma_ c.37.1.8 (A:) Ran {Hum 80.5 0.89 6.5E-05 43.2 5.6 22 986-1007 5-26 (170)
197 d1xzpa2 c.37.1.8 (A:212-371) T 80.5 0.36 2.6E-05 45.0 2.6 22 986-1007 2-23 (160)
198 d1qhxa_ c.37.1.3 (A:) Chloramp 80.5 0.51 3.7E-05 43.9 3.8 34 492-527 3-36 (178)
199 d2ew1a1 c.37.1.8 (A:4-174) Rab 80.3 0.41 3E-05 45.5 3.1 22 986-1007 7-28 (171)
200 d1mkya1 c.37.1.8 (A:2-172) Pro 80.1 0.42 3.1E-05 45.3 3.0 21 986-1006 2-22 (171)
201 d2onka1 c.37.1.12 (A:1-240) Mo 80.0 0.4 2.9E-05 49.6 3.0 22 987-1008 27-48 (240)
202 d1r2qa_ c.37.1.8 (A:) Rab5a {H 79.9 0.46 3.3E-05 45.1 3.2 22 986-1007 8-29 (170)
203 d2f9la1 c.37.1.8 (A:8-182) Rab 79.8 0.46 3.3E-05 45.4 3.2 22 986-1007 6-27 (175)
204 d3b60a1 c.37.1.12 (A:329-581) 79.8 0.4 2.9E-05 49.8 2.9 26 983-1008 40-65 (253)
205 d1ihua1 c.37.1.10 (A:1-296) Ar 79.8 0.93 6.8E-05 46.3 5.9 36 983-1018 7-45 (296)
206 d2awna2 c.37.1.12 (A:4-235) Ma 79.7 0.49 3.6E-05 48.6 3.6 24 985-1008 27-50 (232)
207 d1z08a1 c.37.1.8 (A:17-183) Ra 79.5 0.48 3.5E-05 44.8 3.2 21 986-1006 5-25 (167)
208 d1l2ta_ c.37.1.12 (A:) MJ0796 79.4 0.45 3.2E-05 48.9 3.1 24 985-1008 32-55 (230)
209 d2pmka1 c.37.1.12 (A:467-707) 79.3 0.4 2.9E-05 49.5 2.7 26 983-1008 28-53 (241)
210 d1r0wa_ c.37.1.12 (A:) Cystic 79.3 0.48 3.5E-05 49.9 3.4 26 983-1008 61-86 (281)
211 d1a7ja_ c.37.1.6 (A:) Phosphor 79.3 0.41 3E-05 50.8 2.9 35 986-1020 6-43 (288)
212 d2cxxa1 c.37.1.8 (A:2-185) GTP 79.2 0.45 3.3E-05 45.2 2.9 21 986-1006 2-22 (184)
213 d1g2912 c.37.1.12 (1:1-240) Ma 79.1 0.45 3.3E-05 49.1 3.1 24 985-1008 30-53 (240)
214 d2atva1 c.37.1.8 (A:5-172) Ras 79.0 0.5 3.7E-05 44.9 3.2 22 986-1007 4-25 (168)
215 d1mv5a_ c.37.1.12 (A:) Multidr 79.0 0.45 3.3E-05 49.1 3.1 26 983-1008 27-52 (242)
216 d2erya1 c.37.1.8 (A:10-180) r- 78.9 0.48 3.5E-05 45.0 3.0 22 986-1007 7-28 (171)
217 d1byia_ c.37.1.10 (A:) Dethiob 78.9 0.8 5.8E-05 44.3 4.8 33 985-1017 2-38 (224)
218 d1jj7a_ c.37.1.12 (A:) Peptide 78.8 0.47 3.4E-05 49.2 3.1 26 983-1008 39-64 (251)
219 d1p5zb_ c.37.1.1 (B:) Deoxycyt 78.7 0.23 1.7E-05 49.5 0.6 26 985-1010 3-28 (241)
220 d1zp6a1 c.37.1.25 (A:6-181) Hy 78.7 0.45 3.3E-05 44.6 2.7 33 495-529 7-39 (176)
221 d3dhwc1 c.37.1.12 (C:1-240) Me 78.5 0.4 2.9E-05 49.6 2.4 24 985-1008 32-55 (240)
222 d1kaga_ c.37.1.2 (A:) Shikimat 78.2 0.41 3E-05 43.7 2.2 32 493-526 3-34 (169)
223 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 78.2 0.55 4E-05 45.1 3.2 22 986-1007 4-25 (184)
224 d3d31a2 c.37.1.12 (A:1-229) Su 78.2 0.42 3.1E-05 49.1 2.5 24 985-1008 27-50 (229)
225 d1ky3a_ c.37.1.8 (A:) Rab-rela 78.2 0.55 4E-05 44.5 3.2 21 986-1006 4-24 (175)
226 d1g16a_ c.37.1.8 (A:) Rab-rela 78.0 0.54 3.9E-05 44.3 3.1 22 986-1007 4-25 (166)
227 d2fn4a1 c.37.1.8 (A:24-196) r- 77.8 0.54 3.9E-05 44.8 3.0 22 986-1007 8-29 (173)
228 d2erxa1 c.37.1.8 (A:6-176) di- 77.7 0.55 4E-05 44.4 3.0 21 986-1006 4-24 (171)
229 d1v43a3 c.37.1.12 (A:7-245) Hy 77.7 0.62 4.5E-05 48.1 3.6 24 985-1008 33-56 (239)
230 d1yzqa1 c.37.1.8 (A:14-177) Ra 77.6 0.57 4.1E-05 44.0 3.1 21 986-1006 2-22 (164)
231 d2g6ba1 c.37.1.8 (A:58-227) Ra 77.5 0.6 4.4E-05 44.2 3.2 22 986-1007 8-29 (170)
232 d1svma_ c.37.1.20 (A:) Papillo 77.4 0.55 4E-05 51.2 3.2 37 490-528 152-188 (362)
233 d1xtqa1 c.37.1.8 (A:3-169) GTP 77.4 0.58 4.2E-05 44.1 3.1 23 985-1007 5-27 (167)
234 g1f2t.1 c.37.1.12 (A:,B:) Rad5 77.3 0.57 4.1E-05 47.4 3.2 21 987-1007 26-46 (292)
235 d1x3sa1 c.37.1.8 (A:2-178) Rab 77.1 0.62 4.5E-05 44.5 3.2 23 985-1007 8-30 (177)
236 d1moza_ c.37.1.8 (A:) ADP-ribo 77.0 0.61 4.4E-05 44.6 3.2 22 984-1005 17-38 (182)
237 d2bmea1 c.37.1.8 (A:6-179) Rab 76.9 0.6 4.4E-05 44.3 3.1 21 986-1006 7-27 (174)
238 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 76.7 0.65 4.7E-05 44.3 3.2 23 985-1007 3-25 (177)
239 d1svia_ c.37.1.8 (A:) Probable 76.5 0.6 4.4E-05 45.2 3.0 21 986-1006 25-45 (195)
240 d1xpua3 c.37.1.11 (A:129-417) 76.3 3.2 0.00023 43.7 8.8 24 985-1008 44-67 (289)
241 d1oxxk2 c.37.1.12 (K:1-242) Gl 76.2 0.51 3.7E-05 48.8 2.4 24 985-1008 32-55 (242)
242 d1z0ja1 c.37.1.8 (A:2-168) Rab 76.1 0.69 5E-05 43.6 3.2 22 986-1007 6-27 (167)
243 d1c1ya_ c.37.1.8 (A:) Rap1A {H 75.7 0.72 5.2E-05 43.5 3.2 22 986-1007 5-26 (167)
244 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 75.4 0.74 5.4E-05 43.5 3.2 22 986-1007 5-26 (170)
245 d1iqpa2 c.37.1.20 (A:2-232) Re 75.0 0.94 6.8E-05 45.0 4.0 57 452-527 22-83 (231)
246 d1b0ua_ c.37.1.12 (A:) ATP-bin 74.9 0.69 5E-05 48.1 3.1 24 985-1008 29-52 (258)
247 d1qhla_ c.37.1.12 (A:) Cell di 74.8 0.27 2E-05 46.4 -0.2 22 987-1008 27-48 (222)
248 d1mh1a_ c.37.1.8 (A:) Rac {Hum 74.1 0.82 6E-05 43.8 3.2 22 986-1007 7-28 (183)
249 g1ii8.1 c.37.1.12 (A:,B:) Rad5 74.1 0.69 5E-05 47.1 2.8 23 986-1008 25-47 (369)
250 d1x1ra1 c.37.1.8 (A:10-178) Ra 74.0 0.85 6.2E-05 43.3 3.3 23 985-1007 5-27 (169)
251 d2bcgy1 c.37.1.8 (Y:3-196) GTP 73.9 0.79 5.7E-05 44.6 3.1 22 986-1007 8-29 (194)
252 d2g3ya1 c.37.1.8 (A:73-244) GT 73.8 0.8 5.8E-05 43.6 3.0 21 986-1006 5-25 (172)
253 d2hyda1 c.37.1.12 (A:324-578) 73.0 0.53 3.8E-05 49.0 1.5 26 983-1008 43-68 (255)
254 d2fu5c1 c.37.1.8 (C:3-175) Rab 73.0 0.55 4E-05 44.7 1.6 21 986-1006 8-28 (173)
255 d2c78a3 c.37.1.8 (A:9-212) Elo 72.8 3.4 0.00025 40.8 7.7 72 983-1055 2-104 (204)
256 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 72.6 3.2 0.00023 39.1 7.2 23 986-1008 4-26 (200)
257 d1m7ba_ c.37.1.8 (A:) RhoE (RN 72.3 0.91 6.7E-05 43.6 3.1 22 986-1007 4-25 (179)
258 d1svsa1 c.37.1.8 (A:32-60,A:18 72.0 3.2 0.00023 39.0 7.0 22 986-1007 4-25 (195)
259 d1ji0a_ c.37.1.12 (A:) Branche 71.9 0.78 5.7E-05 47.1 2.5 24 985-1008 33-56 (240)
260 d2atxa1 c.37.1.8 (A:9-193) Rho 71.8 0.95 6.9E-05 43.6 3.0 22 986-1007 11-32 (185)
261 g1xew.1 c.37.1.12 (X:,Y:) Smc 71.5 0.77 5.6E-05 47.8 2.4 22 987-1008 29-50 (329)
262 d2eyqa3 c.37.1.19 (A:546-778) 71.3 5.8 0.00042 40.2 9.2 33 985-1017 77-112 (233)
263 d2iyva1 c.37.1.2 (A:2-166) Shi 71.1 0.83 6E-05 43.2 2.4 31 492-524 1-31 (165)
264 d1egaa1 c.37.1.8 (A:4-182) GTP 70.9 0.98 7.2E-05 42.5 2.9 21 986-1006 7-27 (179)
265 d2ngra_ c.37.1.8 (A:) CDC42 {H 70.8 1 7.5E-05 43.5 3.1 22 986-1007 5-26 (191)
266 d2jdid3 c.37.1.11 (D:82-357) C 70.5 15 0.0011 38.0 12.5 24 985-1008 69-92 (276)
267 d2bv3a2 c.37.1.8 (A:7-282) Elo 70.4 6.7 0.00049 40.8 9.6 25 985-1009 7-31 (276)
268 d1puia_ c.37.1.8 (A:) Probable 70.0 0.67 4.9E-05 43.6 1.4 21 985-1005 17-37 (188)
269 d1xx6a1 c.37.1.24 (A:2-142) Th 69.9 16 0.0011 34.0 11.4 31 987-1017 10-43 (141)
270 d1vpla_ c.37.1.12 (A:) Putativ 69.4 1.1 8.1E-05 45.9 3.1 24 985-1008 29-52 (238)
271 d1ihua2 c.37.1.10 (A:308-586) 68.7 2.1 0.00015 43.4 5.1 32 987-1018 23-57 (279)
272 d1g6ha_ c.37.1.12 (A:) MJ1267 68.7 1 7.3E-05 46.6 2.5 24 985-1008 31-54 (254)
273 d1lnza2 c.37.1.8 (A:158-342) O 67.9 1 7.3E-05 43.0 2.2 20 986-1005 3-22 (185)
274 d1udxa2 c.37.1.8 (A:157-336) O 67.7 0.98 7.1E-05 43.0 2.1 21 986-1006 3-23 (180)
275 d1sxjd2 c.37.1.20 (D:26-262) R 67.6 1.7 0.00013 42.7 4.1 38 705-745 109-146 (237)
276 d1mkya2 c.37.1.8 (A:173-358) P 67.6 1.4 0.0001 41.8 3.2 23 985-1007 9-31 (186)
277 d1wb1a4 c.37.1.8 (A:1-179) Elo 67.5 4.5 0.00033 38.4 7.0 21 986-1006 7-27 (179)
278 d1viaa_ c.37.1.2 (A:) Shikimat 67.3 1.1 7.9E-05 42.4 2.3 32 493-526 1-32 (161)
279 d1l7vc_ c.37.1.12 (C:) ABC tra 67.1 0.96 7E-05 46.1 2.0 23 985-1007 26-48 (231)
280 d1knqa_ c.37.1.17 (A:) Glucona 67.1 1.2 8.4E-05 41.5 2.4 33 493-527 7-39 (171)
281 d1vioa2 d.66.1.5 (A:0-57) Pseu 65.7 1.6 0.00012 34.9 2.7 26 197-223 25-50 (58)
282 d2bdta1 c.37.1.25 (A:1-176) Hy 65.4 1.7 0.00012 39.9 3.1 28 493-522 3-30 (176)
283 d1xbta1 c.37.1.24 (A:18-150) T 64.8 3.1 0.00023 38.6 5.0 31 987-1017 5-38 (133)
284 d2bmja1 c.37.1.8 (A:66-240) Ce 63.2 2 0.00015 41.2 3.4 25 983-1007 4-28 (175)
285 d1m8pa3 c.37.1.15 (A:391-573) 62.6 0.73 5.3E-05 42.8 -0.0 27 494-522 8-34 (183)
286 d1cp2a_ c.37.1.10 (A:) Nitroge 62.5 3.1 0.00022 42.1 4.9 34 985-1018 2-38 (269)
287 d1sxjb2 c.37.1.20 (B:7-230) Re 62.3 2 0.00015 42.3 3.3 38 706-746 103-140 (224)
288 d1fnna2 c.37.1.20 (A:1-276) CD 62.1 2.9 0.00021 41.2 4.5 53 454-519 16-68 (276)
289 d1w1wa_ c.37.1.12 (A:) Smc hea 62.1 1.9 0.00014 45.8 3.3 23 987-1009 28-50 (427)
290 d1e6ca_ c.37.1.2 (A:) Shikimat 62.0 1.7 0.00012 41.1 2.6 33 492-526 2-34 (170)
291 d1e69a_ c.37.1.12 (A:) Smc hea 61.6 1.2 9.1E-05 45.6 1.6 22 987-1008 27-48 (308)
292 d1zina1 c.37.1.1 (A:1-125,A:16 61.5 1.8 0.00013 40.8 2.6 30 494-525 2-31 (182)
293 d1p6xa_ c.37.1.1 (A:) Thymidin 61.2 1.6 0.00012 46.9 2.4 31 985-1015 7-39 (333)
294 d1x6va3 c.37.1.4 (A:34-228) Ad 60.7 1.1 8E-05 42.5 0.9 32 493-526 20-51 (195)
295 d1dm9a_ d.66.1.3 (A:) Heat sho 60.4 2.2 0.00016 38.3 2.9 31 196-228 28-58 (104)
296 d1u0la2 c.37.1.8 (A:69-293) Pr 59.9 2.3 0.00017 43.2 3.2 28 985-1012 96-123 (225)
297 d1z63a1 c.37.1.19 (A:432-661) 59.0 3.2 0.00024 41.1 4.2 39 985-1023 32-75 (230)
298 d1njfa_ c.37.1.20 (A:) delta p 59.0 11 0.00079 37.4 8.4 40 704-746 115-154 (239)
299 d2g9na1 c.37.1.19 (A:21-238) I 57.0 2.6 0.00019 42.1 3.1 55 943-1000 9-65 (218)
300 d1nija1 c.37.1.10 (A:2-223) Hy 56.5 2.2 0.00016 42.8 2.3 23 986-1008 5-27 (222)
301 d1qvra3 c.37.1.20 (A:536-850) 55.9 2.9 0.00021 44.3 3.3 72 435-532 17-94 (315)
302 d1a5ta2 c.37.1.20 (A:1-207) de 55.9 18 0.0013 35.1 9.3 54 690-746 93-147 (207)
303 d1whha_ b.34.10.1 (A:) CLIP170 54.9 11 0.00078 33.6 6.5 33 643-676 55-93 (102)
304 d1osna_ c.37.1.1 (A:) Thymidin 54.3 2.2 0.00016 45.7 2.0 25 986-1010 7-31 (331)
305 d1qdea_ c.37.1.19 (A:) Initiat 53.7 4 0.00029 40.4 3.8 54 943-999 7-62 (212)
306 d1t5la1 c.37.1.19 (A:2-414) Nu 53.7 11 0.00077 41.4 7.6 56 948-1018 10-65 (413)
307 d1sxjc2 c.37.1.20 (C:12-238) R 52.5 2.3 0.00017 41.7 1.8 39 704-745 99-137 (227)
308 d1s2ma1 c.37.1.19 (A:46-251) P 51.8 3 0.00022 40.9 2.4 50 947-999 2-53 (206)
309 d1hyqa_ c.37.1.10 (A:) Cell di 51.2 6.8 0.0005 38.0 5.1 31 988-1018 6-39 (232)
310 d2afhe1 c.37.1.10 (E:1-289) Ni 50.9 6.1 0.00045 40.2 4.9 33 986-1018 4-39 (289)
311 d1gkub1 c.37.1.16 (B:1-250) He 50.7 3.5 0.00025 41.0 2.7 32 985-1016 59-93 (237)
312 d1g3qa_ c.37.1.10 (A:) Cell di 50.0 7.4 0.00054 37.7 5.1 32 987-1018 5-40 (237)
313 d1e2ka_ c.37.1.1 (A:) Thymidin 49.9 2.8 0.00021 44.8 2.0 25 986-1010 6-30 (329)
314 d1t9ha2 c.37.1.8 (A:68-298) Pr 49.9 2.2 0.00016 43.5 1.1 27 985-1011 98-124 (231)
315 d1y63a_ c.37.1.1 (A:) Probable 48.9 5.1 0.00037 36.8 3.5 28 491-520 4-31 (174)
316 d1ckea_ c.37.1.1 (A:) CMP kina 47.9 4.1 0.0003 39.2 2.7 36 492-531 3-38 (225)
317 d3adka_ c.37.1.1 (A:) Adenylat 46.7 4.6 0.00033 38.7 2.8 34 492-529 8-41 (194)
318 d2ak3a1 c.37.1.1 (A:0-124,A:16 46.6 4.7 0.00034 38.9 2.9 29 493-523 7-35 (189)
319 d1t6na_ c.37.1.19 (A:) Spliceo 46.3 3.8 0.00028 40.3 2.2 50 947-999 2-53 (207)
320 d2i3ba1 c.37.1.11 (A:1-189) Ca 46.1 4 0.00029 37.4 2.2 26 492-519 1-26 (189)
321 d1zaka1 c.37.1.1 (A:3-127,A:15 46.1 3.8 0.00027 39.1 2.1 29 493-523 4-32 (189)
322 d1ukza_ c.37.1.1 (A:) Uridylat 46.0 5 0.00036 38.3 3.0 32 490-523 6-37 (196)
323 d1w36b1 c.37.1.19 (B:1-485) Ex 45.5 5.9 0.00043 42.5 3.8 23 986-1008 18-41 (485)
324 d1ak2a1 c.37.1.1 (A:14-146,A:1 45.5 5.5 0.0004 37.9 3.2 32 492-527 3-34 (190)
325 d1v8ca1 d.15.3.1 (A:1-87) MoaD 45.4 4.9 0.00036 34.3 2.5 27 199-225 54-82 (87)
326 d1bifa1 c.37.1.7 (A:37-249) 6- 45.4 3.1 0.00023 39.7 1.3 27 492-520 1-28 (213)
327 d1kska3 d.66.1.5 (A:1-59) Pseu 44.9 5.8 0.00042 31.6 2.7 26 197-223 24-49 (59)
328 d1w5sa2 c.37.1.20 (A:7-293) CD 44.7 5.5 0.0004 39.3 3.1 57 453-519 15-71 (287)
329 d1d2ea3 c.37.1.8 (A:55-250) El 44.7 17 0.0012 35.4 6.8 25 983-1007 2-26 (196)
330 d1q0ua_ c.37.1.19 (A:) Probabl 44.4 3 0.00022 40.5 1.1 15 985-999 39-53 (209)
331 d1vjka_ d.15.3.1 (A:) Molybdop 44.1 5.8 0.00043 33.6 2.8 24 199-224 61-84 (88)
332 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 43.9 5.4 0.00039 44.6 3.3 23 985-1007 25-48 (623)
333 d1bg2a_ c.37.1.9 (A:) Kinesin 43.7 3.2 0.00023 43.8 1.2 17 985-1001 77-93 (323)
334 d1j3ba1 c.91.1.1 (A:212-529) P 43.2 3.9 0.00028 43.5 1.7 17 986-1002 16-32 (318)
335 d1ni3a1 c.37.1.8 (A:11-306) Yc 43.2 6.1 0.00045 40.9 3.4 32 985-1016 11-47 (296)
336 d1c06a_ d.66.1.2 (A:) Ribosoma 42.8 5.7 0.00041 38.2 2.7 29 197-226 75-103 (159)
337 d1akya1 c.37.1.1 (A:3-130,A:16 42.8 5.5 0.0004 37.7 2.7 32 492-525 2-33 (180)
338 d1hv8a1 c.37.1.19 (A:3-210) Pu 42.8 7.4 0.00054 38.0 3.7 56 947-1005 5-63 (208)
339 d1whja_ b.34.10.1 (A:) Restin- 41.4 15 0.0011 32.7 5.1 34 642-676 53-92 (102)
340 d1z3ix2 c.37.1.19 (X:92-389) R 41.4 13 0.00094 38.1 5.6 44 983-1026 78-131 (298)
341 d1zunb3 c.37.1.8 (B:16-237) Su 41.3 23 0.0017 35.0 7.3 27 983-1009 8-34 (222)
342 d2olra1 c.91.1.1 (A:228-540) P 41.3 4.9 0.00035 42.7 2.1 17 986-1002 16-32 (313)
343 d1goja_ c.37.1.9 (A:) Kinesin 41.2 3.6 0.00026 44.0 1.1 17 985-1001 81-97 (354)
344 d1tq4a_ c.37.1.8 (A:) Interfer 41.0 6.3 0.00046 42.8 3.1 23 984-1006 56-78 (400)
345 d2j0sa1 c.37.1.19 (A:22-243) P 40.2 7.3 0.00053 38.8 3.2 52 945-999 16-69 (222)
346 d1c4oa1 c.37.1.19 (A:2-409) Nu 40.2 20 0.0015 38.9 7.2 34 985-1018 29-62 (408)
347 d2cdna1 c.37.1.1 (A:1-181) Ade 40.2 5.2 0.00038 37.7 2.0 28 494-523 2-29 (181)
348 d1q3ta_ c.37.1.1 (A:) CMP kina 40.1 6.3 0.00046 38.0 2.7 33 494-530 5-37 (223)
349 d1ixda_ b.34.10.1 (A:) Cylindr 40.0 31 0.0023 30.6 7.1 36 643-678 49-90 (104)
350 d1e4va1 c.37.1.1 (A:1-121,A:15 39.8 5.8 0.00043 37.2 2.3 28 494-523 2-29 (179)
351 d1s3ga1 c.37.1.1 (A:1-125,A:16 39.6 6.4 0.00047 37.1 2.6 29 494-524 2-30 (182)
352 d2gnoa2 c.37.1.20 (A:11-208) g 39.3 7.5 0.00055 38.0 3.1 37 707-746 82-118 (198)
353 d1g8fa3 c.37.1.15 (A:390-511) 39.0 18 0.0013 33.2 5.4 33 985-1017 7-44 (122)
354 d1fx0a3 c.37.1.11 (A:97-372) C 38.8 33 0.0024 35.2 8.3 24 985-1008 68-91 (276)
355 d2gy9d1 d.66.1.2 (D:2-205) Rib 38.6 5.4 0.0004 39.8 1.9 30 196-226 117-146 (204)
356 d2hqha1 b.34.10.1 (A:26-97) Dy 38.2 8.5 0.00062 32.2 2.8 34 642-676 31-70 (72)
357 d1f60a3 c.37.1.8 (A:2-240) Elo 37.3 19 0.0014 36.1 6.0 27 982-1008 4-30 (239)
358 d1rz3a_ c.37.1.6 (A:) Hypothet 37.3 4.7 0.00034 37.8 1.1 37 486-524 15-52 (198)
359 d1ry6a_ c.37.1.9 (A:) Kinesin 37.1 4.7 0.00034 42.6 1.2 17 985-1001 86-102 (330)
360 d1ii2a1 c.91.1.1 (A:201-523) P 36.9 6.2 0.00045 42.0 2.1 17 986-1002 16-32 (323)
361 d1jala1 c.37.1.8 (A:1-278) Ych 36.1 8 0.00058 39.5 2.8 30 986-1015 4-37 (278)
362 d2eyqa3 c.37.1.19 (A:546-778) 35.6 14 0.001 37.3 4.5 60 453-524 49-111 (233)
363 d1oywa2 c.37.1.19 (A:1-206) Re 34.5 11 0.00081 36.1 3.5 24 985-1008 41-64 (206)
364 d1fm0d_ d.15.3.1 (D:) Molybdop 33.8 12 0.00088 31.3 3.1 24 199-224 52-75 (81)
365 d1f9va_ c.37.1.9 (A:) Kinesin 33.5 18 0.0013 38.1 5.2 17 985-1001 84-100 (342)
366 d1x88a1 c.37.1.9 (A:18-362) Ki 33.3 5.4 0.00039 42.4 0.9 17 985-1001 82-98 (345)
367 d1lkxa_ c.37.1.9 (A:) Myosin S 33.1 11 0.00079 43.9 3.6 24 985-1008 87-110 (684)
368 d1d0xa2 c.37.1.9 (A:2-33,A:80- 32.7 11 0.0008 44.1 3.6 24 985-1008 126-149 (712)
369 d1qf9a_ c.37.1.1 (A:) UMP/CMP 32.6 9.2 0.00067 36.2 2.4 30 493-524 7-36 (194)
370 d1teva_ c.37.1.1 (A:) UMP/CMP 32.2 9.1 0.00066 36.2 2.3 31 493-527 2-32 (194)
371 d2jdia3 c.37.1.11 (A:95-379) C 32.1 9.9 0.00072 39.6 2.7 23 985-1007 69-91 (285)
372 d1v8ka_ c.37.1.9 (A:) Kinesin 31.6 5.2 0.00038 43.0 0.4 17 985-1001 115-131 (362)
373 d1br2a2 c.37.1.9 (A:80-789) My 30.6 13 0.00091 43.5 3.6 24 985-1008 92-115 (710)
374 d1rifa_ c.37.1.23 (A:) DNA hel 30.1 23 0.0016 36.2 5.2 49 951-1016 112-164 (282)
375 d2exda1 b.40.12.1 (A:72-143) H 29.9 20 0.0015 29.7 3.8 46 186-231 19-65 (72)
376 d1g7sa4 c.37.1.8 (A:1-227) Ini 29.8 15 0.0011 36.2 3.5 22 987-1008 8-29 (227)
377 d1khta_ c.37.1.1 (A:) Adenylat 29.6 9 0.00065 35.1 1.7 27 492-520 1-27 (190)
378 d1p9ka_ d.66.1.6 (A:) Hypothet 29.5 6.1 0.00044 33.5 0.4 26 197-223 45-70 (79)
379 d2mysa2 c.37.1.9 (A:4-33,A:80- 29.4 13 0.00092 44.1 3.4 24 985-1008 124-147 (794)
380 d1gkya_ c.37.1.1 (A:) Guanylat 29.3 12 0.0009 35.5 2.7 33 493-527 2-34 (186)
381 d1kk8a2 c.37.1.9 (A:1-28,A:77- 28.7 14 0.001 43.6 3.6 24 985-1008 122-145 (789)
382 d2uubd1 d.66.1.2 (D:2-209) Rib 28.6 13 0.00093 37.1 2.7 30 196-226 121-150 (208)
383 d1wxqa1 c.37.1.8 (A:1-319) GTP 28.0 13 0.00094 38.3 2.8 30 987-1016 3-36 (319)
384 d1sdma_ c.37.1.9 (A:) Kinesin 27.7 12 0.0009 39.8 2.6 17 985-1001 76-92 (364)
385 d1jnya3 c.37.1.8 (A:4-227) Elo 27.1 17 0.0013 35.6 3.5 27 983-1009 2-28 (224)
386 d1y9qa2 b.82.1.15 (A:83-181) P 27.0 36 0.0026 28.9 5.2 37 189-231 46-82 (99)
387 d1w7ja2 c.37.1.9 (A:63-792) My 26.6 17 0.0012 42.5 3.7 24 985-1008 95-118 (730)
388 d1whka_ b.34.10.1 (A:) Restin- 26.5 43 0.0031 29.0 5.5 35 642-677 42-82 (91)
389 d1ye8a1 c.37.1.11 (A:1-178) Hy 26.5 11 0.00083 34.5 1.8 35 701-735 96-130 (178)
390 d1h3fa2 d.66.1.4 (A:352-432) T 26.3 29 0.0021 29.0 4.3 32 198-230 43-74 (81)
391 d2fnaa2 c.37.1.20 (A:1-283) Ar 26.2 17 0.0012 35.2 3.2 39 492-532 29-67 (283)
392 d1h75a_ c.47.1.1 (A:) Glutared 25.9 80 0.0058 25.2 7.0 34 986-1019 2-35 (76)
393 d2ogqa2 d.223.1.2 (A:507-593) 25.9 38 0.0028 28.9 5.0 31 196-228 20-51 (87)
394 d1yj5a2 c.37.1.1 (A:351-522) 5 25.8 13 0.00094 35.2 2.1 36 489-526 11-46 (172)
395 d1mb3a_ c.23.1.1 (A:) Cell div 25.4 1.9E+02 0.014 24.7 10.2 85 1035-1134 37-121 (123)
396 d1puja_ c.37.1.8 (A:) Probable 24.8 21 0.0015 36.2 3.7 26 982-1007 110-135 (273)
397 d1lvga_ c.37.1.1 (A:) Guanylat 24.8 17 0.0013 34.6 2.9 28 494-523 2-29 (190)
398 d1m7ga_ c.37.1.4 (A:) Adenosin 24.5 18 0.0013 35.3 3.0 37 494-532 26-66 (208)
399 d2ncda_ c.37.1.9 (A:) Kinesin 24.3 15 0.0011 39.1 2.6 17 985-1001 126-142 (368)
400 d1xo3a_ d.15.3.3 (A:) C9orf74 24.2 13 0.00094 32.5 1.6 28 199-226 68-97 (101)
401 d2qn6a3 c.37.1.8 (A:2-206) Ini 23.6 23 0.0017 33.9 3.6 26 981-1006 5-30 (205)
402 d1g8pa_ c.37.1.20 (A:) ATPase 23.4 17 0.0012 37.6 2.7 23 494-518 30-52 (333)
403 d1zesa1 c.23.1.1 (A:3-123) Pho 22.9 1.6E+02 0.012 25.2 9.2 86 1034-1134 35-120 (121)
404 d1c9ka_ c.37.1.11 (A:) Adenosy 22.9 17 0.0012 35.2 2.3 32 987-1019 2-33 (180)
405 d1ly1a_ c.37.1.1 (A:) Polynucl 21.4 18 0.0013 32.3 2.0 23 494-518 4-26 (152)
406 d1r7ha_ c.47.1.1 (A:) Glutared 21.2 1.2E+02 0.0088 23.8 7.2 34 986-1019 2-35 (74)
407 d1jbea_ c.23.1.1 (A:) CheY pro 21.2 1.2E+02 0.009 26.3 8.0 87 1035-1136 41-127 (128)
408 d2e3ia1 b.34.10.1 (A:58-128) R 21.1 18 0.0013 30.0 1.8 33 642-675 29-67 (71)
409 d1n0ua2 c.37.1.8 (A:3-343) Elo 21.1 22 0.0016 37.8 2.9 24 985-1008 18-41 (341)
410 d2zfia1 c.37.1.9 (A:4-352) Kin 20.9 19 0.0014 37.9 2.5 17 985-1001 88-104 (349)
411 d2e3ha1 b.34.10.1 (A:212-282) 20.8 30 0.0022 28.6 3.1 32 642-674 29-66 (71)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=4.2e-36 Score=327.42 Aligned_cols=229 Identities=40% Similarity=0.612 Sum_probs=202.8
Q ss_pred CCCCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCcc
Q 001031 941 PSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1183)
Q Consensus 941 ~~e~~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L 1020 (1183)
..++.++|+||+|+++++++|.+.+.+ +.+++.|.+.+.. +++++|||||||||||++|++||++++.+++.++++++
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~-~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l 81 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGK-IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDF 81 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----C-CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSS
T ss_pred CCCCCCCHHHHhchHHHHHHHHHHHHH-HHCHHHHHHcCCC-CCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHh
Confidence 345689999999999999999998865 7788888876644 55899999999999999999999999999999999999
Q ss_pred ccccccchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCc--chHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCC
Q 001031 1021 TSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNR 1098 (1183)
Q Consensus 1021 ~s~~~GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~--~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~ 1098 (1183)
.+.|+|++++.++.+|..|++++|+||||||||.+++.+... .......+++++|+..++++.. +.+|+||||||.
T Consensus 82 ~~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~v~vIatTn~ 159 (256)
T d1lv7a_ 82 VEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEG--NEGIIVIAATNR 159 (256)
T ss_dssp TTSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCS--SSCEEEEEEESC
T ss_pred hhcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC--CCCEEEEEeCCC
Confidence 999999999999999999999999999999999998766432 2234556788999999998754 367999999999
Q ss_pred CCCCcHHHHh--ccCcEEEecCCCHHHHHHHHHHHHhhccCCChhhHHHHHHHcCCCcHHHHHHHHHHHHHHhHHHH
Q 001031 1099 PFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI 1173 (1183)
Q Consensus 1099 p~~Ld~aLlr--RFd~vI~I~lPd~eeR~eILk~iL~k~~l~~didl~~LA~~TeGySg~DL~~L~~~Aa~~Aire~ 1173 (1183)
++.||++++| ||++.++|++|+.++|.+||+.++.+..+..+.++..|++.|+||+++||.++|++|++.++++.
T Consensus 160 ~~~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~~ 236 (256)
T d1lv7a_ 160 PDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGN 236 (256)
T ss_dssp TTTSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 9999999998 99999999999999999999999999988889999999999999999999999999999988653
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1e-35 Score=322.73 Aligned_cols=227 Identities=39% Similarity=0.591 Sum_probs=201.8
Q ss_pred CCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCcccc
Q 001031 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1022 (1183)
Q Consensus 943 e~~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s 1022 (1183)
.+.++|+||+|++++++.|++.+.. +.+++.|.+.+. .++++|||+||||||||+||++||++++.+++.++++++.+
T Consensus 3 ~p~~~~~di~G~~~~k~~l~~~i~~-l~~~~~~~~~g~-~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 3 APKVTFKDVAGAEEAKEELKEIVEF-LKNPSRFHEMGA-RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 80 (247)
T ss_dssp CCSCCGGGCCSCHHHHHHHHHHHHH-HHCHHHHHHTTC-CCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred CCCCcHHHHccHHHHHHHHHHHHHH-HHCHHHHHHcCC-CCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhh
Confidence 3468999999999999999997764 888898988774 45689999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcc--hHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCC
Q 001031 1023 KWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPF 1100 (1183)
Q Consensus 1023 ~~~GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~--~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~ 1100 (1183)
.|+|++++.++.+|..|+.++|+||||||||.+++.+.... ......+++++|+..++++.. +.+|+||+|||.++
T Consensus 81 ~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~--~~~vivi~tTn~~~ 158 (247)
T d1ixza_ 81 MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEK--DTAIVVMAATNRPD 158 (247)
T ss_dssp SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCT--TCCEEEEEEESCGG
T ss_pred ccccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCC--CCCEEEEEeCCCcc
Confidence 99999999999999999999999999999999987764432 234566788999999998753 46799999999999
Q ss_pred CCcHHHHh--ccCcEEEecCCCHHHHHHHHHHHHhhccCCChhhHHHHHHHcCCCcHHHHHHHHHHHHHHhHHHH
Q 001031 1101 DLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREI 1173 (1183)
Q Consensus 1101 ~Ld~aLlr--RFd~vI~I~lPd~eeR~eILk~iL~k~~l~~didl~~LA~~TeGySg~DL~~L~~~Aa~~Aire~ 1173 (1183)
.||++++| ||+.+++|+.|+.++|.+||+.++.+.....+.++..||+.|+||+++||.++|++|++.++++.
T Consensus 159 ~ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~ 233 (247)
T d1ixza_ 159 ILDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG 233 (247)
T ss_dssp GSCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ccCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 99999997 99999999999999999999999998888889999999999999999999999999999988764
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.3e-35 Score=323.20 Aligned_cols=226 Identities=42% Similarity=0.690 Sum_probs=204.6
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccc
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~ 1025 (1183)
++|+||+|++++++.|++.+..|+.+++.|.+.++. +++|+|||||||||||++|+++|++++.+++.++++++.+.+.
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~-~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~ 79 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVK-PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLA 79 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCC-CCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCT
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCC-CCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhccccc
Confidence 479999999999999999999999999999988754 6689999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHH
Q 001031 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA 1105 (1183)
Q Consensus 1026 GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~a 1105 (1183)
|..+..++.+|..|++++|+||||||+|.+++++... ..+...+++..++..+++.. .+.+|+||+|||.++.+|++
T Consensus 80 g~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~-~~~~~~~~~~~~~~~~~~~~--~~~~vlvi~tTn~~~~ld~a 156 (258)
T d1e32a2 80 GESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGLK--QRAHVIVMAATNRPNSIDPA 156 (258)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHC-CCTTHHHHHHHHHHHHHTCC--CSSCEEEEEEESCGGGSCGG
T ss_pred ccHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCC-CCchHHHHHHHhcccccccc--ccCCccEEEeCCCccccchh
Confidence 9999999999999999999999999999998665332 22334567777777777654 34679999999999999999
Q ss_pred HHh--ccCcEEEecCCCHHHHHHHHHHHHhhccCCChhhHHHHHHHcCCCcHHHHHHHHHHHHHHhHHHHHh
Q 001031 1106 VVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILE 1175 (1183)
Q Consensus 1106 Llr--RFd~vI~I~lPd~eeR~eILk~iL~k~~l~~didl~~LA~~TeGySg~DL~~L~~~Aa~~Aire~le 1175 (1183)
++| ||+++++|++|+.++|.+||+.++.+..+..+.++..||++|+||+++||.++|++|++.|+++...
T Consensus 157 l~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~ 228 (258)
T d1e32a2 157 LRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMD 228 (258)
T ss_dssp GTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccceeECCCCCHHHHHHHhhhhccCcccccccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc
Confidence 999 9999999999999999999999999888888899999999999999999999999999999998754
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.3e-34 Score=316.65 Aligned_cols=230 Identities=43% Similarity=0.741 Sum_probs=198.9
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCcccccc
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKW 1024 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~ 1024 (1183)
..+|+||+|+++++++|.+.+.+|+.+++.|.+.++ .++++||||||||||||+||+++|.+++.+|+.++++++.+.+
T Consensus 3 ~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~-~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~~ 81 (265)
T d1r7ra3 3 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGM-TPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 81 (265)
T ss_dssp CCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCC-CCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTSC
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCC-CCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhcc
Confidence 679999999999999999999999999999988774 4568999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCC--cchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCC
Q 001031 1025 FGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN--PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDL 1102 (1183)
Q Consensus 1025 ~GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~--~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~L 1102 (1183)
.|..+..++.+|..|+.+.|+||||||+|.++..+.. ........++++.|+..++++..+ .+++||||||.++.|
T Consensus 82 ~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~--~~v~vi~ttn~~~~l 159 (265)
T d1r7ra3 82 FGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDII 159 (265)
T ss_dssp TTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC--------CCEEEECCBSCTTT
T ss_pred ccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCC--CCEEEEEeCCCchhC
Confidence 9999999999999999999999999999999865421 223344567889999999887543 569999999999999
Q ss_pred cHHHHh--ccCcEEEecCCCHHHHHHHHHHHHhhccCCChhhHHHHHHHcCCCcHHHHHHHHHHHHHHhHHHHHhhh
Q 001031 1103 DEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREILEKE 1177 (1183)
Q Consensus 1103 d~aLlr--RFd~vI~I~lPd~eeR~eILk~iL~k~~l~~didl~~LA~~TeGySg~DL~~L~~~Aa~~Aire~le~e 1177 (1183)
|++++| ||+.+++|+.|+.++|.+||+.++.+..+..++++..|+.+|+||+++||.++|+.|...|+++.++.+
T Consensus 160 d~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~~~~~ 236 (265)
T d1r7ra3 160 DPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESE 236 (265)
T ss_dssp SCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC----
T ss_pred CHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCchhhhhHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 899999999999999999999999887777888999999999999999999999999999998877654
No 5
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.87 E-value=8.2e-23 Score=220.51 Aligned_cols=168 Identities=23% Similarity=0.299 Sum_probs=133.0
Q ss_pred CCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccccch-HHHHHHHHHHHhccCCeEEEEeCCcccccCC
Q 001031 981 TKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEG-EKYVKAVFSLASKIAPSVVFVDEVDSMLGRR 1059 (1183)
Q Consensus 981 ~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~Ges-E~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r 1059 (1183)
..|+++||||||||||||++|++||++++++|+.+++++++..+.+.. .+.++++|..|++.+|+||||||||.+++.+
T Consensus 37 ~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A~~~~p~il~iDEid~l~~~~ 116 (246)
T d1d2na_ 37 RTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYV 116 (246)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHHHTSSEEEEEECCHHHHTTCB
T ss_pred CCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchhhhhhhhhhhhhhcccceeehhhhhhHhhhc
Confidence 457789999999999999999999999999999999988766655544 4679999999999999999999999998654
Q ss_pred CCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHH-HHhccCcEEEecCCCHHHHHHHHHHHHhhccCC
Q 001031 1060 ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEA-VVRRLPRRLMVNLPDAPNREKIIRVILAKEELA 1138 (1183)
Q Consensus 1060 ~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~a-LlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~ 1138 (1183)
... ....+.++++++..+++.... ..+|+||||||.++.|++. +.+||+..+++ |+..+|.++++.+... ...
T Consensus 117 ~~~--~~~~~~~~~~ll~~l~~~~~~-~~~v~vi~tTn~~~~ld~~~~~~rF~~~i~~--P~~~~r~~il~~l~~~-~~~ 190 (246)
T d1d2na_ 117 PIG--PRFSNLVLQALLVLLKKAPPQ-GRKLLIIGTTSRKDVLQEMEMLNAFSTTIHV--PNIATGEQLLEALELL-GNF 190 (246)
T ss_dssp TTT--TBCCHHHHHHHHHHTTCCCST-TCEEEEEEEESCHHHHHHTTCTTTSSEEEEC--CCEEEHHHHHHHHHHH-TCS
T ss_pred ccc--cchhHHHHHHHHHHhcCCCcc-ccceeeeeccCChhhccchhhcCccceEEec--CCchhHHHHHHHHHhc-cCC
Confidence 331 112246677888888887543 4689999999999999875 56799877765 6766777777655433 334
Q ss_pred ChhhHHHHHHHcCCCc
Q 001031 1139 SDVDLEGIANMADGYS 1154 (1183)
Q Consensus 1139 ~didl~~LA~~TeGyS 1154 (1183)
.+.++..++..+.|..
T Consensus 191 ~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 191 KDKERTTIAQQVKGKK 206 (246)
T ss_dssp CHHHHHHHHHHHTTSE
T ss_pred ChHHHHHHHHHcCCCc
Confidence 6778899999999865
No 6
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.84 E-value=3.8e-21 Score=185.11 Aligned_cols=106 Identities=25% Similarity=0.402 Sum_probs=98.3
Q ss_pred ccceeccccCCCCceeeecceeEEccCCccceeecCC---------CCCccceEEEEee-cCCcceEEEEEecCCceEEE
Q 001031 133 PWARLISQCSQNSHLSMTGAVFTVGHNRQCDLYLKDP---------SISKNLCRLRRIE-NGGPSGALLEITGGKGEVEV 202 (1183)
Q Consensus 133 pW~rL~s~~~~~p~~~i~~~~~t~G~~~~cd~~l~d~---------~~s~~~c~l~~~~-~~g~~~a~le~~~~~G~v~v 202 (1183)
|||||+++..++|++++.+..|+|||+..||+.|+++ .||..||+|.+.. .++..+++|++.|+||| +|
T Consensus 1 PwgrL~~~~~~~~~~~L~~~~~~iGR~~~cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~d~S~NGT-~v 79 (116)
T d1gxca_ 1 PWARLWALQDGFANLECVNDNYWFGRDKSCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIEDHSGNGT-FV 79 (116)
T ss_dssp CCEEEEECSTTCCCEEECSSEEEEESSTTCSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEECCSSCE-EE
T ss_pred CeEEEEecCCCCceEEeCCCCEEeeeCCCCCeEecCCccccccccceEecceEEEEEecccCCCCEEEEECCCccCc-eE
Confidence 8999999999999999999999999999999999997 6899999998764 34556799999999999 69
Q ss_pred cCeecCCCceEEeeCCCEEEEccCCCeeEEeeecCcc
Q 001031 203 NGNVHPKDSQVVLRGGDELVFSPSGKHSYIFQQLSDD 239 (1183)
Q Consensus 203 Ng~~~~k~~~~~L~~gDev~f~~~~~~ayifq~l~~~ 239 (1183)
||+++.|+..++|++||+|.|+....++|+|+||..|
T Consensus 80 N~~~i~~~~~~~L~~gD~I~ig~~~~~~f~f~d~~~~ 116 (116)
T d1gxca_ 80 NTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVD 116 (116)
T ss_dssp TTEECCTTCEEECCTTEEEEESSTTCEEEEEEETTCC
T ss_pred CCEEcCCCCEEECCCCCEEEECCCEeEEEEEEEccCC
Confidence 9999999999999999999999999999999998653
No 7
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.82 E-value=1.7e-20 Score=208.29 Aligned_cols=181 Identities=24% Similarity=0.329 Sum_probs=145.3
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccc--cccccc
Q 001031 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIT--SKWFGE 1027 (1183)
Q Consensus 950 DI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~--s~~~Ge 1027 (1183)
.|+|++++++.+...+..++.+..+........|+.++||+||||||||+||+++|+.++.+|+.++++++. +.+.|.
T Consensus 15 ~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~~ 94 (309)
T d1ofha_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94 (309)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGGS
T ss_pred cccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEeee
Confidence 378999999999988865544443332222234678999999999999999999999999999999999987 447899
Q ss_pred hHHHHHHHHHHHhcc-----CCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccC------CCCEEEEEe-
Q 001031 1028 GEKYVKAVFSLASKI-----APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD------KERVLVLAA- 1095 (1183)
Q Consensus 1028 sE~~Ir~lF~~A~k~-----~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~------~~~VlVIaT- 1095 (1183)
.+..++.+|..|... +|+||||||||.+.+.+.....+.....+++.|+..+++..... ..++++|++
T Consensus 95 ~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilfi~~g 174 (309)
T d1ofha_ 95 VDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILFIASG 174 (309)
T ss_dssp TTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCCSSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEEEEEE
T ss_pred ccccccccchhhhcccccccCCceEEehhhhhhhhhccCcccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeEEecc
Confidence 999999999988653 58999999999998777665555455557888999888753221 235677776
Q ss_pred ---cCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHH
Q 001031 1096 ---TNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRV 1130 (1183)
Q Consensus 1096 ---TN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~ 1130 (1183)
++.+..++++++.||+.++.++.|+..++.+|+..
T Consensus 175 a~~~~~~~~~~p~l~~R~~~~i~~~~~~~~~~~~Il~~ 212 (309)
T d1ofha_ 175 AFQVARPSDLIPELQGRLPIRVELTALSAADFERILTE 212 (309)
T ss_dssp CCSSSCGGGSCHHHHHTCCEEEECCCCCHHHHHHHHHS
T ss_pred chhhcCcccchhhhhhhhheeeeccCCCHHHHHHHHHH
Confidence 57789999999999999999999999999999754
No 8
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.81 E-value=8.7e-22 Score=219.59 Aligned_cols=160 Identities=14% Similarity=0.200 Sum_probs=124.6
Q ss_pred cCChhhhhcCCCCCCCce-EEEEcCCCChHHHHHHHHHHHhC--CcEEEEecCccccccccchHHHHHHHHHHHhccCCe
Q 001031 969 LQRPELFCKGQLTKPCKG-ILLFGPPGTGKTMLAKAVATEAG--ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPS 1045 (1183)
Q Consensus 969 l~~~elf~k~~l~kP~~g-VLL~GPPGTGKT~LAkAIA~eLg--~pfi~I~~s~L~s~~~GesE~~Ir~lF~~A~k~~Ps 1045 (1183)
...+..+...+.. +++| +||+||||||||.||+++|.+++ .+|+.+++++++++|.|+.++.++.+|..|+. |+
T Consensus 108 ~~~~~~~~~~~~~-~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~~ 184 (321)
T d1w44a_ 108 GCSPVVAEFGGHR-YASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--HR 184 (321)
T ss_dssp SBCCEEEEETTEE-EESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--CS
T ss_pred ccchHHHHHhhcc-cCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--cc
Confidence 3445555554433 3456 55699999999999999999985 78999999999999999999999999999985 78
Q ss_pred EEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcH----HHHh--ccCcEEEecCC
Q 001031 1046 VVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDE----AVVR--RLPRRLMVNLP 1119 (1183)
Q Consensus 1046 ILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~----aLlr--RFd~vI~I~lP 1119 (1183)
||||||||.+.+.+..........+++++++..+|++... .+|+||||||+ +.+++ +++| ||++.+.+..|
T Consensus 185 ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~--~~v~viaatN~-~~~~~~i~~~~~r~~Rf~~~v~v~~p 261 (321)
T d1w44a_ 185 VIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAAS--RGCVVIASLNP-TSNDDKIVELVKEASRSNSTSLVIST 261 (321)
T ss_dssp EEEEECCTTTC-----------CCHHHHHHHHHHHHHHHH--HTCEEEEECCC-CCCCHHHHHHHHHHHHHSCSEEEEEC
T ss_pred EEEeehhhhhccccccCCCCCcchhhhhhhhhhccccccC--CCeEEEEeCCC-cccccchhhhhhccCcccceeecCCC
Confidence 9999999999988866555555567999999999988654 57999999994 55554 4455 99999999999
Q ss_pred CHHHHHHHHHHHHhh
Q 001031 1120 DAPNREKIIRVILAK 1134 (1183)
Q Consensus 1120 d~eeR~eILk~iL~k 1134 (1183)
+.+.|.+|++.+...
T Consensus 262 d~~~r~~il~~~~~~ 276 (321)
T d1w44a_ 262 DVDGEWQVLTRTGEG 276 (321)
T ss_dssp SSTTEEEEEEECBTT
T ss_pred ChHHHHHHHHHhccC
Confidence 999999998876554
No 9
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=99.77 E-value=4.8e-19 Score=192.01 Aligned_cols=217 Identities=17% Similarity=0.251 Sum_probs=163.1
Q ss_pred CCCccccccccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001031 445 GPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1183)
Q Consensus 445 ~~~~~~vsfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLi 524 (1183)
....++|||+..=-+ |++|..|.+... .+++++. |.+.=.+.++.|||.|||| ....+||||||++++.+++.
T Consensus 3 ~~~~~~~t~~Di~Gl--~~~k~~l~e~v~-~~~~~~~--~~~~g~~~~~~iLL~GppG--tGKT~la~~iA~~~~~~~~~ 75 (256)
T d1lv7a_ 3 TEDQIKTTFADVAGC--DEAKEEVAELVE-YLREPSR--FQKLGGKIPKGVLMVGPPG--TGKTLLAKAIAGEAKVPFFT 75 (256)
T ss_dssp EECSSCCCGGGSCSC--HHHHHHTHHHHH-HHHCGGG--C-----CCCCEEEEECCTT--SCHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCCCHHHHhch--HHHHHHHHHHHH-HHHCHHH--HHHcCCCCCCeEEeeCCCC--CCccHHHHHHHHHcCCCEEE
Confidence 456889999998776 999999998764 4777653 3322223457799999999 79999999999999999999
Q ss_pred EecCCCCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCcccccccccccccCCc
Q 001031 525 VDSLLLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDR 604 (1183)
Q Consensus 525 lDs~~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gdr 604 (1183)
++.+.+.+.+..+.
T Consensus 76 i~~~~l~~~~~g~~------------------------------------------------------------------ 89 (256)
T d1lv7a_ 76 ISGSDFVEMFVGVG------------------------------------------------------------------ 89 (256)
T ss_dssp ECSCSSTTSCCCCC------------------------------------------------------------------
T ss_pred EEhHHhhhcchhHH------------------------------------------------------------------
Confidence 98866654221100
Q ss_pred eeeeccCCCCcccCCCCCCCCCcccceeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcch
Q 001031 605 VKFVGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDE 684 (1183)
Q Consensus 605 vk~~g~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~ 684 (1183)
T Consensus 90 -------------------------------------------------------------------------------- 89 (256)
T d1lv7a_ 90 -------------------------------------------------------------------------------- 89 (256)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHhhccCCCCEEEEEcChhhhhcCC-------hh----hHHHHHHHHhcC--CCCEEEEEeccCCCccc
Q 001031 685 VDKLAINELFEVALNESKSSPLIVFVKDIEKSLTGN-------ND----AYGALKSKLENL--PSNVVVIGSHTQLDSRK 751 (1183)
Q Consensus 685 ~~k~~~~~l~evl~s~~~~~P~Ilf~~Die~~l~~~-------~~----~~~~i~~~L~~L--~g~vivIgs~~~~d~~k 751 (1183)
.--++.+|+.+.. ..|.||||+|+|.++..+ .+ ..+.+-..++.+ ..+|+|||+||
T Consensus 90 --~~~l~~~f~~A~~---~~P~il~iDeiD~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn------ 158 (256)
T d1lv7a_ 90 --ASRVRDMFEQAKK---AAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN------ 158 (256)
T ss_dssp --HHHHHHHHHHHHT---TCSEEEEETTHHHHTCCCSTTSCCTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEES------
T ss_pred --HHHHHHHHHHHHH---cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCC------
Confidence 0116677777765 899999999999976521 12 233444455554 34899999999
Q ss_pred ccCCCCCceeeccCcchhhhccccCCCCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH--HHHHHHhhhhhh
Q 001031 752 EKSHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVET 829 (1183)
Q Consensus 752 ~k~~~~~~~~~~~~~~~~~~~d~~~PD~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lpd 829 (1183)
.|+.+|+ |++| ||+.++++++|+
T Consensus 159 ------------------------~~~~ld~-------------------------------al~R~gRfd~~i~i~~P~ 183 (256)
T d1lv7a_ 159 ------------------------RPDVLDP-------------------------------ALLRPGRFDRQVVVGLPD 183 (256)
T ss_dssp ------------------------CTTTSCG-------------------------------GGGSTTSSCEEEECCCCC
T ss_pred ------------------------CcccCCH-------------------------------hHcCCCCCCEEEECCCcC
Confidence 5566766 7777 888888999999
Q ss_pred hhhccchhHHHHHhhhCCC-CcccchhhhcccCCCCHHHHHHHHhhhhhhHhhh
Q 001031 830 LKGQSNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMH 882 (1183)
Q Consensus 830 ~~gR~~Il~IHT~l~~~~l-~~vdL~~LA~~tkgfsgAdIe~Lv~~A~s~al~r 882 (1183)
.+.|.+|++.+. +.-++ .++++..|+..|.||+++||+.+|+.|...++.+
T Consensus 184 ~~~R~~il~~~l--~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~ 235 (256)
T d1lv7a_ 184 VRGREQILKVHM--RRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARG 235 (256)
T ss_dssp HHHHHHHHHHHH--TTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc--cCCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHc
Confidence 999999998874 33344 6789999999999999999999999998888753
No 10
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.77 E-value=4.6e-20 Score=199.80 Aligned_cols=241 Identities=15% Similarity=0.227 Sum_probs=175.1
Q ss_pred cccccccccchhhHHHHHHhhhhhhccccccc-cccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 451 VSFESFPYYLSDITKNVLIASTYVHLKCNNFA-KYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 451 vsfd~FPYylse~tk~~L~~~~~~hLk~~~~~-k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
|+||..--| |++|.-|.+.....|+++++- +++ + +..+.|||.|||| ....+||||+|++++++++.++.+.
T Consensus 1 ~~~~dv~G~--~~~k~~l~~~i~~~l~~~~~~~~~g--~-~~~~giLL~GppG--tGKT~l~~ala~~~~~~~~~i~~~~ 73 (258)
T d1e32a2 1 VGYDDVGGC--RKQLAQIKEMVELPLRHPALFKAIG--V-KPPRGILLYGPPG--TGKTLIARAVANETGAFFFLINGPE 73 (258)
T ss_dssp CCGGGCCSC--SHHHHHHHHHHHHHHHCHHHHHHCC--C-CCCCEEEEECCTT--SSHHHHHHHHHHHTTCEEEEECHHH
T ss_pred CChhhhccH--HHHHHHHHHHHHHHhcCHHHHHhCC--C-CCCceeEEecCCC--CCchHHHHHHHHHhCCeEEEEEchh
Confidence 688888888 999999999988889998763 332 2 2346799999999 6899999999999999999887544
Q ss_pred CCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCcccccccccccccCCceeeec
Q 001031 530 LPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVKFVG 609 (1183)
Q Consensus 530 ~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gdrvk~~g 609 (1183)
+...+.
T Consensus 74 l~~~~~-------------------------------------------------------------------------- 79 (258)
T d1e32a2 74 IMSKLA-------------------------------------------------------------------------- 79 (258)
T ss_dssp HTTSCT--------------------------------------------------------------------------
T ss_pred hccccc--------------------------------------------------------------------------
Confidence 332111
Q ss_pred cCCCCcccCCCCCCCCCcccceeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcchhHHHH
Q 001031 610 NVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVDKLA 689 (1183)
Q Consensus 610 ~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~k~~ 689 (1183)
......
T Consensus 80 --------------------------------------------------------------------------g~~~~~ 85 (258)
T d1e32a2 80 --------------------------------------------------------------------------GESESN 85 (258)
T ss_dssp --------------------------------------------------------------------------THHHHH
T ss_pred --------------------------------------------------------------------------ccHHHH
Confidence 001112
Q ss_pred HHHHHHHHhhccCCCCEEEEEcChhhhhcC----Chh----hHHHHHHHHhcC--CCCEEEEEeccCCCcccccCCCCCc
Q 001031 690 INELFEVALNESKSSPLIVFVKDIEKSLTG----NND----AYGALKSKLENL--PSNVVVIGSHTQLDSRKEKSHPGGL 759 (1183)
Q Consensus 690 ~~~l~evl~s~~~~~P~Ilf~~Die~~l~~----~~~----~~~~i~~~L~~L--~g~vivIgs~~~~d~~k~k~~~~~~ 759 (1183)
+..+|+.+.. .+|.||||+|+|.++.+ +.+ +...+...++.. ..+|+|||+||
T Consensus 86 l~~~f~~A~~---~~p~il~iDeid~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn-------------- 148 (258)
T d1e32a2 86 LRKAFEEAEK---NAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATN-------------- 148 (258)
T ss_dssp HHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCCCSSCEEEEEEES--------------
T ss_pred HHHHHHHHHh---cCCeEEEehhhhhhccCCCCCCCchHHHHHHHhccccccccccCCccEEEeCC--------------
Confidence 6677777766 89999999999998762 222 233333333333 45899999999
Q ss_pred eeeccCcchhhhccccCCCCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH--HHHHHHhhhhhhhhhccchh
Q 001031 760 LFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNII 837 (1183)
Q Consensus 760 ~~~~~~~~~~~~~d~~~PD~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lpd~~gR~~Il 837 (1183)
.|+.+|+ |++| ||++++++++|+.+.|.+|+
T Consensus 149 ----------------~~~~ld~-------------------------------al~r~gRfd~~i~~~~P~~~~R~~il 181 (258)
T d1e32a2 149 ----------------RPNSIDP-------------------------------ALRRFGRFDREVDIGIPDATGRLEIL 181 (258)
T ss_dssp ----------------CGGGSCG-------------------------------GGTSTTSSCEEEECCCCCHHHHHHHH
T ss_pred ----------------Cccccch-------------------------------hhhhcccccceeECCCCCHHHHHHHh
Confidence 4556666 8888 89999999999999999999
Q ss_pred HHHHHhhhCCC-CcccchhhhcccCCCCHHHHHHHHhhhhhhHhhhccCCCCCCC-cc-eecccchhhhHHHHHhhhh
Q 001031 838 SIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHCSEAPGKDA-KL-KISTESIMYGLNILQGIQS 912 (1183)
Q Consensus 838 ~IHT~l~~~~l-~~vdL~~LA~~tkgfsgAdIe~Lv~~A~s~al~r~~~~i~~~~-kl-~Id~~sIkv~~~dF~~al~ 912 (1183)
+.+.. ...+ .+.+++.||..|.||+|+||+.+|+.|...|+.|....+.... .. ..-.+.+.+++.||+.++.
T Consensus 182 ~~~l~--~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~~~~~~~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 182 QIHTK--NMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp HHTTT--TSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSCCBHHHHHHCCBCHHHHHHHHT
T ss_pred hhhcc--CcccccccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccccchhhhhhhhhhhccCccCHHHHHHHhC
Confidence 98743 3333 6678999999999999999999999999999987643222111 11 0112334567778877654
No 11
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.77 E-value=5e-18 Score=179.16 Aligned_cols=202 Identities=22% Similarity=0.242 Sum_probs=145.2
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccc
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~ 1025 (1183)
.+|+|++|++++++.|..++..... + ..+..++|||||||||||++|+++|++++++++.++......
T Consensus 6 ~~~~divGqe~~~~~l~~~i~~~~~------~---~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~--- 73 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLALEAAKM------R---GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVK--- 73 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHHHHHHHH------H---TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCS---
T ss_pred CcHHHcCChHHHHHHHHHHHHHHHh------c---CCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCccccc---
Confidence 4799999999999999998864322 1 223468999999999999999999999999999998766532
Q ss_pred cchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHh-hcC------CcccCCCCEEEEEecCC
Q 001031 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVN-WDG------LRTKDKERVLVLAATNR 1098 (1183)
Q Consensus 1026 GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~-Ldg------l~~k~~~~VlVIaTTN~ 1098 (1183)
...+..++.. ....+++||||+|.+. ...++.+...+...... +.+ .......++++|++||.
T Consensus 74 ---~~~~~~~~~~--~~~~~~~~ide~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~at~~ 143 (238)
T d1in4a2 74 ---QGDMAAILTS--LERGDVLFIDEIHRLN-----KAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVGATTR 143 (238)
T ss_dssp ---HHHHHHHHHH--CCTTCEEEEETGGGCC-----HHHHHHHHHHHHTSCCCC---------------CCCEEEEEESC
T ss_pred ---HHHHHHHHHh--hccCCchHHHHHHHhh-----hHHHhhcccceeeeeeeeeecCcccccccccCCCCeEEEEecCC
Confidence 2234444443 3346899999999882 22222222222210000 000 00012357899999999
Q ss_pred CCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHHHHHHHhH
Q 001031 1099 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAHCPI 1170 (1183)
Q Consensus 1099 p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~~Aa~~Ai 1170 (1183)
+..+++++++||...+.++.|+.+++..+++.++....+. .+..+..++..+.| +.+++.++++.++..+.
T Consensus 144 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai~~l~~~~~~~~ 215 (238)
T d1in4a2 144 SGLLSSPLRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLT 215 (238)
T ss_dssp GGGSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHH
T ss_pred CccccccceeeeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887765 45558889988876 57777788877665443
No 12
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.6e-18 Score=163.35 Aligned_cols=103 Identities=27% Similarity=0.462 Sum_probs=90.2
Q ss_pred Cccceecccc--CCCCceeeecceeEEccCCccceeecC-CCCCccceEEEEeecCCcceEEEEEecCCceEEEcCeecC
Q 001031 132 IPWARLISQC--SQNSHLSMTGAVFTVGHNRQCDLYLKD-PSISKNLCRLRRIENGGPSGALLEITGGKGEVEVNGNVHP 208 (1183)
Q Consensus 132 ~pW~rL~s~~--~~~p~~~i~~~~~t~G~~~~cd~~l~d-~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~v~vNg~~~~ 208 (1183)
.|||||+++. ...+++.+.+..|||||++.||+.|.| +.+|..||+|...+.++. +++++.|+||| +|||+++.
T Consensus 2 ~pwg~Li~~~~~~~~~~~~l~~~~~~iGR~~~~di~l~d~~~iSr~Ha~I~~~~~~~~--~~~~d~S~nGT-~vNg~~i~ 78 (113)
T d1lgpa_ 2 QPWGRLLRLGAEEGEPHVLLRKREWTIGRRRGCDLSFPSNKLVSGDHCRIVVDEKSGQ--VTLEDTSTSGT-VINKLKVV 78 (113)
T ss_dssp CCCEEECCTTCCSSSCCEEECSSEEEEESSTTSSEECTTCTTSCTTCEEEEECTTTCC--EEEEECSSSCC-CCCCCCCC
T ss_pred CCeEEEEEECCCCCceEEEeCCCCEeeCCCCCCCeEecCCCCcChHHeEEEEccceee--EEecCCCceee-EECCEEcC
Confidence 3999999986 446688999999999999999999975 789999999998655543 88999999999 69999999
Q ss_pred CCceEEeeCCCEEEEccCCC-----eeEEeeecC
Q 001031 209 KDSQVVLRGGDELVFSPSGK-----HSYIFQQLS 237 (1183)
Q Consensus 209 k~~~~~L~~gDev~f~~~~~-----~ayifq~l~ 237 (1183)
|++.++|++||+|.|+...+ .+|+|++++
T Consensus 79 ~~~~~~L~~GD~I~i~~~~~~~~~~~~f~~e~~~ 112 (113)
T d1lgpa_ 79 KKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESLS 112 (113)
T ss_dssp CSSCCCCCTTCEEEEECCSSCGGGCEEEECCCSC
T ss_pred CCceEECCCCCEEEEeecCCCccccEEEEEEccC
Confidence 99999999999999987643 589999875
No 13
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.72 E-value=6.9e-17 Score=170.64 Aligned_cols=200 Identities=22% Similarity=0.264 Sum_probs=139.1
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccc
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~ 1025 (1183)
.+|+|++|++++++.|+.++.....+ ..++.++|||||||||||++|+++|+++++++..++.......
T Consensus 6 ~~~ddivGq~~~~~~L~~~i~~~~~~---------~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~-- 74 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVYLEAAKAR---------KEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP-- 74 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHHHHHHTTS---------SSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH--
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHHhc---------CCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc--
Confidence 58999999999999999988643221 2345789999999999999999999999999999987764321
Q ss_pred cchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHH-hhcCC------cccCCCCEEEEEecCC
Q 001031 1026 GEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV-NWDGL------RTKDKERVLVLAATNR 1098 (1183)
Q Consensus 1026 GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~-~Ldgl------~~k~~~~VlVIaTTN~ 1098 (1183)
+ ......... ....+|+||||+|.+. ...+..+...++.... .+.+. ......++.+|++|++
T Consensus 75 ~----~~~~~~~~~-~~~~~i~~iDe~~~~~-----~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 144 (239)
T d1ixsb2 75 G----DLAAILANS-LEEGDILFIDEIHRLS-----RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTR 144 (239)
T ss_dssp H----HHHHHHHTT-CCTTCEEEEETGGGCC-----HHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCCCEEEEEESC
T ss_pred h----hhHHHHHhh-ccCCCeeeeecccccc-----hhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCCEEEEeeccC
Confidence 1 111111111 1235799999999882 2222333222222100 00000 0012356788888888
Q ss_pred CCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHHHHHH
Q 001031 1099 PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAAH 1167 (1183)
Q Consensus 1099 p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~~Aa~ 1167 (1183)
+.......++|+...+.+..|+.+++.++++.++..+++. ....+..++..+.| ..+...++++.+..
T Consensus 145 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~g-d~R~a~~~l~~~~~ 213 (239)
T d1ixsb2 145 PGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRG-TMRVAKRLFRRVRD 213 (239)
T ss_dssp CSSCSCGGGGGCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTS-SHHHHHHHHHHHHH
T ss_pred cccccchhhcccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCC-CHHHHHHHHHHHHH
Confidence 8888878888888999999999999999999999887755 45568899999988 44555566665543
No 14
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=99.69 E-value=7.9e-18 Score=181.41 Aligned_cols=214 Identities=23% Similarity=0.343 Sum_probs=155.6
Q ss_pred ccccccccccccchhhHHHHHHhhhhhhccccc-cccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 448 NIEVSFESFPYYLSDITKNVLIASTYVHLKCNN-FAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 448 ~~~vsfd~FPYylse~tk~~L~~~~~~hLk~~~-~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
.-+||||+.=-+ |.+|..|.+.... |++++ |.+++. +..+.|||.||+| ....+||||||++.+.+++.+|
T Consensus 3 ~p~~~~~di~G~--~~~k~~l~~~i~~-l~~~~~~~~~g~---~~~~giLl~GppG--tGKT~la~aia~~~~~~~~~i~ 74 (247)
T d1ixza_ 3 APKVTFKDVAGA--EEAKEELKEIVEF-LKNPSRFHEMGA---RIPKGVLLVGPPG--VGKTHLARAVAGEARVPFITAS 74 (247)
T ss_dssp CCSCCGGGCCSC--HHHHHHHHHHHHH-HHCHHHHHHTTC---CCCSEEEEECCTT--SSHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCcHHHHccH--HHHHHHHHHHHHH-HHCHHHHHHcCC---CCCceEEEecCCC--CChhHHHHHHHHHcCCCEEEEE
Confidence 446999998777 9999999887664 66654 444543 3345799999999 7999999999999999999988
Q ss_pred cCCCCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCcccccccccccccCCcee
Q 001031 527 SLLLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVK 606 (1183)
Q Consensus 527 s~~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gdrvk 606 (1183)
.+.+.+.
T Consensus 75 ~~~l~~~------------------------------------------------------------------------- 81 (247)
T d1ixza_ 75 GSDFVEM------------------------------------------------------------------------- 81 (247)
T ss_dssp HHHHHHS-------------------------------------------------------------------------
T ss_pred hHHhhhc-------------------------------------------------------------------------
Confidence 6433221
Q ss_pred eeccCCCCcccCCCCCCCCCcccceeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcchhH
Q 001031 607 FVGNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVD 686 (1183)
Q Consensus 607 ~~g~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 686 (1183)
|+|. .
T Consensus 82 ~~g~---------------------------------------------------------------------------~ 86 (247)
T d1ixza_ 82 FVGV---------------------------------------------------------------------------G 86 (247)
T ss_dssp CTTH---------------------------------------------------------------------------H
T ss_pred cccH---------------------------------------------------------------------------H
Confidence 1110 1
Q ss_pred HHHHHHHHHHHhhccCCCCEEEEEcChhhhhcC--------Ch---hhHHHHHHHHhcCC--CCEEEEEeccCCCccccc
Q 001031 687 KLAINELFEVALNESKSSPLIVFVKDIEKSLTG--------NN---DAYGALKSKLENLP--SNVVVIGSHTQLDSRKEK 753 (1183)
Q Consensus 687 k~~~~~l~evl~s~~~~~P~Ilf~~Die~~l~~--------~~---~~~~~i~~~L~~L~--g~vivIgs~~~~d~~k~k 753 (1183)
.-.|+.+|+.+.. .+|.||||+|+|.++.. +. .+.+.|-..|+.+. .+|+|||+||
T Consensus 87 ~~~l~~~f~~a~~---~~p~Ii~iDeid~l~~~r~~~~~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn-------- 155 (247)
T d1ixza_ 87 AARVRDLFETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATN-------- 155 (247)
T ss_dssp HHHHHHHHHHHTT---SSSEEEEEETHHHHHC---------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEES--------
T ss_pred HHHHHHHHHHHHH---cCCEEEEEEChhhhCccCCCCCCCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCC--------
Confidence 1125667776654 78999999999997652 11 12333444455553 4899999999
Q ss_pred CCCCCceeeccCcchhhhccccCCCCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH--HHHHHHhhhhhhhh
Q 001031 754 SHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLK 831 (1183)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~d~~~PD~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lpd~~ 831 (1183)
.|+.+|+ +++| ||+.+++++.|+.+
T Consensus 156 ----------------------~~~~ld~-------------------------------al~R~~Rf~~~i~~~~P~~~ 182 (247)
T d1ixza_ 156 ----------------------RPDILDP-------------------------------ALLRPGRFDRQIAIDAPDVK 182 (247)
T ss_dssp ----------------------CGGGSCG-------------------------------GGGSTTSSCEEEECCSCCHH
T ss_pred ----------------------CccccCH-------------------------------hHcCCCCCcEEEEECCcCHH
Confidence 3445555 6666 78778888888888
Q ss_pred hccchhHHHHHhhhCCC-CcccchhhhcccCCCCHHHHHHHHhhhhhhHhhhc
Q 001031 832 GQSNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHC 883 (1183)
Q Consensus 832 gR~~Il~IHT~l~~~~l-~~vdL~~LA~~tkgfsgAdIe~Lv~~A~s~al~r~ 883 (1183)
.|.+|++.+.. ..++ .+.+++.||..|.||+++||+.+|+.|...++.+.
T Consensus 183 eR~~il~~~l~--~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~ 233 (247)
T d1ixza_ 183 GREQILRIHAR--GKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREG 233 (247)
T ss_dssp HHHHHHHHHHT--TSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhc--ccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 88888877643 2232 77899999999999999999999999998887643
No 15
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.69 E-value=3.3e-18 Score=185.91 Aligned_cols=216 Identities=20% Similarity=0.254 Sum_probs=158.7
Q ss_pred ccccccccccchhhHHHHHHhhhhhhcccccc-ccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecC
Q 001031 450 EVSFESFPYYLSDITKNVLIASTYVHLKCNNF-AKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1183)
Q Consensus 450 ~vsfd~FPYylse~tk~~L~~~~~~hLk~~~~-~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~ 528 (1183)
++||+++=-| |+.|..|......+|++++. .+++ -+..+.|||+||+| ....+||||||++++++++.++.+
T Consensus 3 ~~~f~di~G~--~~~k~~l~~~i~~~l~~~~~~~~~g---~~~~~giLL~Gp~G--tGKT~l~~ala~~~~~~~~~~~~~ 75 (265)
T d1r7ra3 3 QVTWEDIGGL--EDVKRELQELVQYPVEHPDKFLKFG---MTPSKGVLFYGPPG--CGKTLLAKAIANECQANFISIKGP 75 (265)
T ss_dssp CCSCSSCSSS--SCCCCHHHHHTHHHHHCHHHHHHCC---CCCCCEEEEBCCTT--SSHHHHHHHHHHHTTCEEEEECHH
T ss_pred CCCHHHhcCH--HHHHHHHHHHHHHHhhCHHHHHhCC---CCCCCeEEEECCCC--CcchhHHHHHHHHhCCcEEEEEHH
Confidence 6899998888 99999999998878887654 2332 23567799999999 689999999999999999988754
Q ss_pred CCCCCCCccccccccchhhhhhhHHHHHHHhhhccCCCCccccccccccccccCCCCCCCcccccccccccccCCceeee
Q 001031 529 LLPGGSSKEADSVKESSRTEKASMFAKRAALLQHRKPTSSVEADITGGTAVGSQALPKPEISTASSKNYTFKKGDRVKFV 608 (1183)
Q Consensus 529 ~~~g~~~~e~~~~~~~~~~e~~s~~~k~s~~~~~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gdrvk~~ 608 (1183)
++.+.+..
T Consensus 76 ~l~~~~~~------------------------------------------------------------------------ 83 (265)
T d1r7ra3 76 ELLTMWFG------------------------------------------------------------------------ 83 (265)
T ss_dssp HHHTSCTT------------------------------------------------------------------------
T ss_pred Hhhhcccc------------------------------------------------------------------------
Confidence 43321110
Q ss_pred ccCCCCcccCCCCCCCCCcccceeeeccccCCCCceeeeecCCCCCCCCCCCCCCCCCCcccccccccccCCCcchhHHH
Q 001031 609 GNVTSGTTVQPTLRGPGIGFRGRVILPFEDNDFSKIGVRFDRSIPEGNNLGGFCEDDHGFFCTASSLRLDSSLGDEVDKL 688 (1183)
Q Consensus 609 g~~~~~~~~~~~~~~p~~g~~g~v~~~~e~n~s~kvgV~fd~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~k~ 688 (1183)
...-
T Consensus 84 ----------------------------------------------------------------------------~~~~ 87 (265)
T d1r7ra3 84 ----------------------------------------------------------------------------ESEA 87 (265)
T ss_dssp ----------------------------------------------------------------------------THHH
T ss_pred ----------------------------------------------------------------------------chHH
Confidence 0111
Q ss_pred HHHHHHHHHhhccCCCCEEEEEcChhhhhcC------C-hhhHH-HHHHHHhcC-----CCCEEEEEeccCCCcccccCC
Q 001031 689 AINELFEVALNESKSSPLIVFVKDIEKSLTG------N-NDAYG-ALKSKLENL-----PSNVVVIGSHTQLDSRKEKSH 755 (1183)
Q Consensus 689 ~~~~l~evl~s~~~~~P~Ilf~~Die~~l~~------~-~~~~~-~i~~~L~~L-----~g~vivIgs~~~~d~~k~k~~ 755 (1183)
.+..+|..+.. .+|.||||+|+|.++.. + ...-. .+...|..| ..+|+|||+||
T Consensus 88 ~l~~~f~~A~~---~~p~il~ideid~l~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn---------- 154 (265)
T d1r7ra3 88 NVREIFDKARQ---AAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATN---------- 154 (265)
T ss_dssp HHHHHHHHHHH---TCSEEEEESSGGGTCCHHHHCCCTTHHHHHHHHHHHHHTCC------CCEEEECCB----------
T ss_pred HHHHHHHHHHh---cCCcceeHHhhhhccccCCCcCCCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCC----------
Confidence 25667777766 78999999999998762 1 11111 222233333 23699999999
Q ss_pred CCCceeeccCcchhhhccccCCCCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH--HHHHHHhhhhhhhhhc
Q 001031 756 PGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQ 833 (1183)
Q Consensus 756 ~~~~~~~~~~~~~~~~~d~~~PD~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lpd~~gR 833 (1183)
.|+.+|+ |++| ||+.+++++.|+...|
T Consensus 155 --------------------~~~~ld~-------------------------------al~r~gRf~~~i~~~~p~~~~R 183 (265)
T d1r7ra3 155 --------------------RPDIIDP-------------------------------AILRPGRLDQLIYIPLPDEKSR 183 (265)
T ss_dssp --------------------SCTTTSC-------------------------------GGGSSTTSEEEEECCCCCCHHH
T ss_pred --------------------CchhCCH-------------------------------HHhCCCCccEEEEecchHHHHH
Confidence 5566766 7776 8898999999999999
Q ss_pred cchhHHHHHhhhCCC-CcccchhhhcccCCCCHHHHHHHHhhhhhhHhhhccCC
Q 001031 834 SNIISIRSVLSRNGL-DCVDLESLCIKDQTLTTEGVEKIVGWALSHHFMHCSEA 886 (1183)
Q Consensus 834 ~~Il~IHT~l~~~~l-~~vdL~~LA~~tkgfsgAdIe~Lv~~A~s~al~r~~~~ 886 (1183)
.+|++.+.. ...+ .+.+++.|+..|.||+++||+.+|+.|...|+++..+.
T Consensus 184 ~~il~~~l~--~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~~~~ 235 (265)
T d1r7ra3 184 VAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES 235 (265)
T ss_dssp HHHHHHHTT--CC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHhc--cCCchhhhhHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998743 3333 67899999999999999999999999999999876553
No 16
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.67 E-value=4.4e-16 Score=163.61 Aligned_cols=188 Identities=24% Similarity=0.269 Sum_probs=135.3
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC-----CcEEEEecCc
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSS 1019 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg-----~pfi~I~~s~ 1019 (1183)
..+|+||+|++++++.|+.++.. . ...++||+||||+|||++|+++|++++ .+++++++++
T Consensus 20 P~~~~diig~~~~~~~l~~~i~~----------~----~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~e~n~s~ 85 (231)
T d1iqpa2 20 PQRLDDIVGQEHIVKRLKHYVKT----------G----SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASD 85 (231)
T ss_dssp CCSTTTCCSCHHHHHHHHHHHHH----------T----CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTC
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C----CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCeeEEecCc
Confidence 35899999999999999998752 1 224799999999999999999999874 5788888776
Q ss_pred cccccccchHHHHHHHHH--HHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecC
Q 001031 1020 ITSKWFGEGEKYVKAVFS--LASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1183)
Q Consensus 1020 L~s~~~GesE~~Ir~lF~--~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN 1097 (1183)
..+.. .........+. ........||+|||+|.+. ...+. .|+..+.. ...++.+|++||
T Consensus 86 ~~~~~--~~~~~~~~~~~~~~~~~~~~~iilide~d~~~-----~~~~~-------~ll~~l~~----~~~~~~~i~~~n 147 (231)
T d1iqpa2 86 ERGIN--VIREKVKEFARTKPIGGASFKIIFLDEADALT-----QDAQQ-------ALRRTMEM----FSSNVRFILSCN 147 (231)
T ss_dssp HHHHH--TTHHHHHHHHHSCCGGGCSCEEEEEETGGGSC-----HHHHH-------HHHHHHHH----TTTTEEEEEEES
T ss_pred ccchh--HHHHHHHHHHhhhhccCCCceEEeehhhhhcc-----hhHHH-------HHhhhccc----CCcceEEEeccC
Confidence 43321 11111111111 1123456899999999873 11121 22222221 235689999999
Q ss_pred CCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHHHHH
Q 001031 1098 RPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAA 1166 (1183)
Q Consensus 1098 ~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~~Aa 1166 (1183)
....+++++++|| ..+.+..|+..+...+++.++.++++. ++..++.|++.+.| ..+++-++++.|+
T Consensus 148 ~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g-diR~ai~~Lq~~~ 215 (231)
T d1iqpa2 148 YSSKIIEPIQSRC-AIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG-DMRRAINILQAAA 215 (231)
T ss_dssp CGGGSCHHHHHTE-EEEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred ChhhchHhHhCcc-ccccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 9999999999999 789999999999999999999987764 56678999998876 5555555555543
No 17
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.60 E-value=9.3e-15 Score=155.29 Aligned_cols=185 Identities=24% Similarity=0.278 Sum_probs=135.2
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCc--------------
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGAN-------------- 1011 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~p-------------- 1011 (1183)
.+|+|++|++++++.|..++.. .+.++.+||+||||+|||++|+++++.++.+
T Consensus 9 ~~~~dlig~~~~~~~L~~~i~~-------------~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~~~~~ 75 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANGLSL-------------GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNC 75 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHHHHT-------------TCCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSCSHHH
T ss_pred CCHHHccChHHHHHHHHHHHHc-------------CCCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCccccchHH
Confidence 5899999999999999988753 2345679999999999999999999987432
Q ss_pred ----------EEEEecCccccccccchHHHHHHHHHHHhcc----CCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHH
Q 001031 1012 ----------FINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMV 1077 (1183)
Q Consensus 1012 ----------fi~I~~s~L~s~~~GesE~~Ir~lF~~A~k~----~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~ 1077 (1183)
++.++..+.. ....++.++..+... ...||||||+|.| +. ...+.|+.
T Consensus 76 ~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l-----~~-------~~q~~Llk 137 (239)
T d1njfa_ 76 REIEQGRFVDLIEIDAASRT------KVEDTRDLLDNVQYAPARGRFKVYLIDEVHML-----SR-------HSFNALLK 137 (239)
T ss_dssp HHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSCCCSCSSSSSEEEEEETGGGS-----CH-------HHHHHHHH
T ss_pred HHHHcCCCCeEEEecchhcC------CHHHHHHHHHHHHhccccCCCEEEEEECcccC-----CH-------HHHHHHHH
Confidence 3444433211 123456666555322 3359999999988 21 22234444
Q ss_pred hhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHH
Q 001031 1078 NWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGS 1156 (1183)
Q Consensus 1078 ~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~ 1156 (1183)
.++. ...++.+|++||.+..+.+++++|| ..+.++.|+.++..+++..++..++.. ++..++.|+..+.| +.+
T Consensus 138 ~lE~----~~~~~~~il~tn~~~~i~~~i~SRc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~s~G-d~R 211 (239)
T d1njfa_ 138 TLEE----PPEHVKFLLATTDPQKLPVTILSRC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEG-SLR 211 (239)
T ss_dssp HHHS----CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHTTT-CHH
T ss_pred HHhc----CCCCeEEEEEcCCccccChhHhhhh-cccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHHcCC-CHH
Confidence 4443 2366889999999999999999999 789999999999999999988876554 56678899999887 555
Q ss_pred HHHHHHHHHHH
Q 001031 1157 DLKNLCVTAAH 1167 (1183)
Q Consensus 1157 DL~~L~~~Aa~ 1167 (1183)
..-++++.|..
T Consensus 212 ~ain~l~~~~~ 222 (239)
T d1njfa_ 212 DALSLTDQAIA 222 (239)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55566665543
No 18
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.59 E-value=7e-15 Score=153.66 Aligned_cols=187 Identities=20% Similarity=0.212 Sum_probs=127.9
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCC-----cEEEEecCc
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA-----NFINISMSS 1019 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~-----pfi~I~~s~ 1019 (1183)
..+|+|++|++++++.|+.++.. + . ..++||+||||+|||++|+++|++++. .++.++.++
T Consensus 10 P~~~~divg~~~~~~~L~~~i~~----------~---~-~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~e~~~~~ 75 (227)
T d1sxjc2 10 PETLDEVYGQNEVITTVRKFVDE----------G---K-LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASD 75 (227)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHT----------T---C-CCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEEEECTTS
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C---C-CCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeEEecccc
Confidence 35899999999999999998752 1 1 236999999999999999999999742 356666655
Q ss_pred cccccccchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCC
Q 001031 1020 ITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRP 1099 (1183)
Q Consensus 1020 L~s~~~GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p 1099 (1183)
..+.............+.........||+|||+|.+. ...+ +.++..++. ....++++++||.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~~-----~~~~-------~~Ll~~le~----~~~~~~~~~~~~~~ 139 (227)
T d1sxjc2 76 DRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAMT-----NAAQ-------NALRRVIER----YTKNTRFCVLANYA 139 (227)
T ss_dssp CCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGSC-----HHHH-------HHHHHHHHH----TTTTEEEEEEESCG
T ss_pred cCCeeeeecchhhccccccccCCCeEEEEEeccccch-----hhHH-------HHHHHHhhh----cccceeeccccCcH
Confidence 4332111110000000001112234599999999882 1222 223333332 22568889999999
Q ss_pred CCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHH
Q 001031 1100 FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCV 1163 (1183)
Q Consensus 1100 ~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~ 1163 (1183)
..+.+++++|+ ..+.+..|+.++..+++..++..+++. ++..++.|++.+.| ..+..-++++
T Consensus 140 ~~i~~~i~sr~-~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G-d~R~ain~Lq 202 (227)
T d1sxjc2 140 HKLTPALLSQC-TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG-DMRRVLNVLQ 202 (227)
T ss_dssp GGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT-CHHHHHHHTT
T ss_pred HHhHHHHHHHH-hhhccccccccccccccccccccccccCCHHHHHHHHHHcCC-cHHHHHHHHH
Confidence 99999999999 789999999999999999999887764 56678999999887 3333333333
No 19
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.57 E-value=3.5e-14 Score=150.03 Aligned_cols=190 Identities=20% Similarity=0.268 Sum_probs=124.4
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCC-hhhh---hcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCcc
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQR-PELF---CKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSI 1020 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~-~elf---~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L 1020 (1183)
..+|+|++|+++.+++|.+++...... +..+ ...+ ..+.+++||+||||||||++|+++|++++++++.+++++.
T Consensus 10 P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~-~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~~~~ 88 (253)
T d1sxja2 10 PTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDG-SGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDV 88 (253)
T ss_dssp CSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTS-TTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECTTSC
T ss_pred CCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccC-CCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhccccccc
Confidence 357999999999999999988642211 1100 1111 2234689999999999999999999999999999998875
Q ss_pred ccccccchHHHHHHH---------H-----HHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccC
Q 001031 1021 TSKWFGEGEKYVKAV---------F-----SLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1086 (1183)
Q Consensus 1021 ~s~~~GesE~~Ir~l---------F-----~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~ 1086 (1183)
.+.+.... .+... + .........+|++||+|.+.... +.....++ ++... .
T Consensus 89 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~-----~~~~~~~~-~~~~~-------~ 153 (253)
T d1sxja2 89 RSKTLLNA--GVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGD-----RGGVGQLA-QFCRK-------T 153 (253)
T ss_dssp CCHHHHHH--TGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTS-----TTHHHHHH-HHHHH-------C
T ss_pred hhhHHHHH--HHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccch-----hhhhHHHh-hhhcc-------c
Confidence 54321100 00000 0 01122346799999999885322 12222222 12111 2
Q ss_pred CCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCC
Q 001031 1087 KERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADG 1152 (1183)
Q Consensus 1087 ~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeG 1152 (1183)
...++++++++....+++ +++| ...+.|+.|+.+++..+++.++.++++. ++..++.|+..+.|
T Consensus 154 ~~~ii~i~~~~~~~~~~~-l~~~-~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~~~l~~i~~~s~G 218 (253)
T d1sxja2 154 STPLILICNERNLPKMRP-FDRV-CLDIQFRRPDANSIKSRLMTIAIREKFKLDPNVIDRLIQTTRG 218 (253)
T ss_dssp SSCEEEEESCTTSSTTGG-GTTT-SEEEECCCCCHHHHHHHHHHHHHHHTCCCCTTHHHHHHHHTTT
T ss_pred cccccccccccccccccc-ccce-eeeeeccccchhHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCC
Confidence 245677766666666653 4444 4899999999999999999999876653 45568999998876
No 20
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.54 E-value=2.6e-14 Score=149.54 Aligned_cols=182 Identities=19% Similarity=0.192 Sum_probs=130.2
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCC-----cEEEEecCc
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA-----NFINISMSS 1019 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~-----pfi~I~~s~ 1019 (1183)
..+|+|++|++++++.|+.++.. . ...++||+||||+|||++|+.+|++++. .++.+++++
T Consensus 11 P~~~~d~ig~~~~~~~L~~~~~~----------~----~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~~~~n~~~ 76 (224)
T d1sxjb2 11 PQVLSDIVGNKETIDRLQQIAKD----------G----NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASD 76 (224)
T ss_dssp CSSGGGCCSCTHHHHHHHHHHHS----------C----CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHEEEECTTS
T ss_pred CCCHHHhcCCHHHHHHHHHHHHc----------C----CCCeEEEECCCCCCchhhHHHHHHHHhccccccccccccccc
Confidence 46899999999999999988752 1 1246999999999999999999999854 477787766
Q ss_pred cccccccchHHHHHHHHHHH-h------ccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEE
Q 001031 1020 ITSKWFGEGEKYVKAVFSLA-S------KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLV 1092 (1183)
Q Consensus 1020 L~s~~~GesE~~Ir~lF~~A-~------k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlV 1092 (1183)
..+. ..+...+... . .....||+|||+|.+. ...+. .++..+.. ......+
T Consensus 77 ~~~~------~~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~-----~~~~~-------~ll~~~e~----~~~~~~~ 134 (224)
T d1sxjb2 77 DRGI------DVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT-----AGAQQ-------ALRRTMEL----YSNSTRF 134 (224)
T ss_dssp CCSH------HHHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC-----HHHHH-------TTHHHHHH----TTTTEEE
T ss_pred cCCc------eehhhHHHHHHHhhccCCCcceEEEEEecccccc-----hhHHH-------HHhhhccc----cccceee
Confidence 4332 1222222211 1 1234699999999883 12222 22222222 2356888
Q ss_pred EEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHHH
Q 001031 1093 LAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVT 1164 (1183)
Q Consensus 1093 IaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~~ 1164 (1183)
+.+|+....+.+++++|| ..+.++.|+.++...++..++.++++. ++..++.++..+.|--...| ++++.
T Consensus 135 i~~~~~~~~i~~~l~sr~-~~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~Gd~R~ai-~~Lq~ 205 (224)
T d1sxjb2 135 AFACNQSNKIIEPLQSQC-AILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAI-NNLQS 205 (224)
T ss_dssp EEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTTCHHHHH-HHHHH
T ss_pred eeccCchhhhhhHHHHHH-HHhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCCcHHHHH-HHHHH
Confidence 889999999999999999 789999999999999999999887765 55668899999887444444 33343
No 21
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.53 E-value=8.3e-14 Score=145.49 Aligned_cols=190 Identities=19% Similarity=0.207 Sum_probs=130.0
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh------CCcEEEEecC
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA------GANFINISMS 1018 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL------g~pfi~I~~s 1018 (1183)
..+|+|++|++++++.|+.++.. . ...++||+||||+|||++++++|+++ ....+.++..
T Consensus 8 P~~~~diig~~~~~~~l~~~i~~----------~----~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~~~~~~ 73 (237)
T d1sxjd2 8 PKNLDEVTAQDHAVTVLKKTLKS----------A----NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNAS 73 (237)
T ss_dssp CSSTTTCCSCCTTHHHHHHHTTC----------T----TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEEEECSS
T ss_pred CCCHHHccCcHHHHHHHHHHHHc----------C----CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchhheecc
Confidence 46899999999999998876642 1 12469999999999999999999986 5667777765
Q ss_pred ccccccccchHHHHHHHH------------HHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccC
Q 001031 1019 SITSKWFGEGEKYVKAVF------------SLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKD 1086 (1183)
Q Consensus 1019 ~L~s~~~GesE~~Ir~lF------------~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~ 1086 (1183)
...+... ....+.... .........||||||+|.+.. .. .+.++..+.. .
T Consensus 74 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~~-----~~-------~~~l~~~~~~----~ 135 (237)
T d1sxjd2 74 DERGISI--VREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTA-----DA-------QSALRRTMET----Y 135 (237)
T ss_dssp SCCCHHH--HTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSCH-----HH-------HHHHHHHHHH----T
T ss_pred ccccchH--HHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccCH-----HH-------HHHHhhcccc----c
Confidence 5432211 001111111 111122345999999998831 11 1122222211 2
Q ss_pred CCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHHHH
Q 001031 1087 KERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTA 1165 (1183)
Q Consensus 1087 ~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~~A 1165 (1183)
.....+|.+++....+.+++++|| ..+.|+.|+.++..++++.++.++++. ++..++.|++.+.|- .+..-++++.+
T Consensus 136 ~~~~~~i~~~~~~~~~~~~l~sr~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~gd-~R~ai~~L~~~ 213 (237)
T d1sxjd2 136 SGVTRFCLICNYVTRIIDPLASQC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGD-LRRGITLLQSA 213 (237)
T ss_dssp TTTEEEEEEESCGGGSCHHHHHHS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSSC-HHHHHHHHHHT
T ss_pred cccccccccccccccccccccchh-hhhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCCC-HHHHHHHHHHH
Confidence 255778888888899999999999 789999999999999999999887764 666789999999873 44444555555
Q ss_pred HHH
Q 001031 1166 AHC 1168 (1183)
Q Consensus 1166 a~~ 1168 (1183)
+..
T Consensus 214 ~~~ 216 (237)
T d1sxjd2 214 SKG 216 (237)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 22
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.51 E-value=1.4e-13 Score=145.19 Aligned_cols=178 Identities=14% Similarity=0.222 Sum_probs=114.2
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC---CcEEEEecCcc-
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISMSSI- 1020 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg---~pfi~I~~s~L- 1020 (1183)
..+|+|++|++++++.|..++.. ...+.++||+||||+|||++|+++|+++. .....++....
T Consensus 7 P~~~~diig~~~~~~~L~~~~~~-------------~~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~~~~~~ 73 (252)
T d1sxje2 7 PKSLNALSHNEELTNFLKSLSDQ-------------PRDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFV 73 (252)
T ss_dssp CCSGGGCCSCHHHHHHHHTTTTC-------------TTCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC---------
T ss_pred CCCHHHccCcHHHHHHHHHHHHc-------------CCCCCeEEEECCCCCCHHHHHHHHHHhhcCcccccccccccccc
Confidence 36899999999999988765432 11234799999999999999999999862 11111111000
Q ss_pred ------------c--------cccccch-HHHHHHHHHHHh--------------ccCCeEEEEeCCcccccCCCCcchH
Q 001031 1021 ------------T--------SKWFGEG-EKYVKAVFSLAS--------------KIAPSVVFVDEVDSMLGRRENPGEH 1065 (1183)
Q Consensus 1021 ------------~--------s~~~Ges-E~~Ir~lF~~A~--------------k~~PsILfIDEID~Ll~~r~~~~~~ 1065 (1183)
. ....+.. ...+........ .....+|+|||+|.+. ....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l~-----~~~~ 148 (252)
T d1sxje2 74 TASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSLT-----KDAQ 148 (252)
T ss_dssp ---------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSSC-----HHHH
T ss_pred ccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEeccccccc-----cccc
Confidence 0 0000111 111111111111 1123599999999882 1111
Q ss_pred HHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccC--CChhhH
Q 001031 1066 EAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEEL--ASDVDL 1143 (1183)
Q Consensus 1066 e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l--~~didl 1143 (1183)
+.++..++. ...++++|++||.++.+.+++++|| ..++|+.|+.++..++++.++..+++ ..+..+
T Consensus 149 -------~~l~~~~e~----~~~~~~~Il~tn~~~~i~~~l~sR~-~~i~~~~~~~~~~~~~l~~i~~~e~~~~~~~~~l 216 (252)
T d1sxje2 149 -------AALRRTMEK----YSKNIRLIMVCDSMSPIIAPIKSQC-LLIRCPAPSDSEISTILSDVVTNERIQLETKDIL 216 (252)
T ss_dssp -------HHHHHHHHH----STTTEEEEEEESCSCSSCHHHHTTS-EEEECCCCCHHHHHHHHHHHHHHHTCEECCSHHH
T ss_pred -------hhhhccccc----ccccccceeeeccccchhhhhhcch-heeeecccchhhHHHHHHHHHHHcCCCCCcHHHH
Confidence 222222221 2356889999999999999999999 68999999999999999999887543 445567
Q ss_pred HHHHHHcCC
Q 001031 1144 EGIANMADG 1152 (1183)
Q Consensus 1144 ~~LA~~TeG 1152 (1183)
+.|+..+.|
T Consensus 217 ~~i~~~s~G 225 (252)
T d1sxje2 217 KRIAQASNG 225 (252)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHcCC
Confidence 889998887
No 23
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.40 E-value=2.4e-12 Score=139.69 Aligned_cols=197 Identities=20% Similarity=0.319 Sum_probs=138.7
Q ss_pred CcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----------CCcEEEEe
Q 001031 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINIS 1016 (1183)
Q Consensus 947 tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL----------g~pfi~I~ 1016 (1183)
.++.++|.++..++|.+.+.. +...++||.||||+|||++++.+|+.. +..++.++
T Consensus 16 ~ld~~igRd~Ei~~l~~iL~r--------------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~ 81 (268)
T d1r6bx2 16 GIDPLIGREKELERAIQVLCR--------------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLD 81 (268)
T ss_dssp CSCCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECC
T ss_pred CCCcccChHHHHHHHHHHHhc--------------CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEee
Confidence 345688999888888877641 223589999999999999999999874 56789999
Q ss_pred cCcccc--ccccchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEE
Q 001031 1017 MSSITS--KWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA 1094 (1183)
Q Consensus 1017 ~s~L~s--~~~GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIa 1094 (1183)
+..+.. .+.|+.+..++.++..+......||||||++.|++.....+..... .+ + |.... ..+.+.+|+
T Consensus 82 ~~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~~g~~~d~---a~-~---Lkp~L--~rg~i~vIg 152 (268)
T d1r6bx2 82 IGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDA---AN-L---IKPLL--SSGKIRVIG 152 (268)
T ss_dssp CC---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCSSSCHHHH---HH-H---HSSCS--SSCCCEEEE
T ss_pred echHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCCCCccccH---HH-H---hhHHH--hCCCCeEEE
Confidence 988875 5789999999999999999888999999999998654433322111 11 1 11111 236789999
Q ss_pred ecCC-----CCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhh----ccCC-ChhhHHHHHHHcC------CCcHHHH
Q 001031 1095 ATNR-----PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAK----EELA-SDVDLEGIANMAD------GYSGSDL 1158 (1183)
Q Consensus 1095 TTN~-----p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k----~~l~-~didl~~LA~~Te------GySg~DL 1158 (1183)
+|.. ...-+++|.+|| .+|.+..|+.++-.+|++.+... .++. .+..+..+..+++ .+....|
T Consensus 153 atT~eey~~~~e~d~al~rrF-~~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdKAI 231 (268)
T d1r6bx2 153 STTYQEFSNIFEKDRALARRF-QKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAI 231 (268)
T ss_dssp EECHHHHHCCCCCTTSSGGGE-EEEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHHHH
T ss_pred eCCHHHHHHHHhhcHHHHhhh-cccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcHHH
Confidence 8864 346688999999 89999999999999999875543 2222 3444444443332 4556666
Q ss_pred HHHHHHHHHH
Q 001031 1159 KNLCVTAAHC 1168 (1183)
Q Consensus 1159 ~~L~~~Aa~~ 1168 (1183)
. ++++|+.+
T Consensus 232 d-llDea~a~ 240 (268)
T d1r6bx2 232 D-VIDEAGAR 240 (268)
T ss_dssp H-HHHHHHHH
T ss_pred H-HHHHHHHH
Confidence 6 55666544
No 24
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.36 E-value=1.6e-11 Score=128.72 Aligned_cols=193 Identities=19% Similarity=0.239 Sum_probs=125.7
Q ss_pred CCCccccc-C--cHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 945 GVTFDDIG-A--LENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 945 ~~tfdDI~-G--le~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
..||+++. | ...+...+++++..+- .....++||||+|||||+|++|+++++ +..++.+++.
T Consensus 6 ~~tFdnF~vg~~N~~a~~~~~~~~~~~~------------~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~ 73 (213)
T d1l8qa2 6 KYTLENFIVGEGNRLAYEVVKEALENLG------------SLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSAD 73 (213)
T ss_dssp TCCSSSCCCCTTTHHHHHHHHHHHHTTT------------TSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CCChhhccCCCcHHHHHHHHHHHHhCcC------------CCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechH
Confidence 56888843 4 4455556666554311 112359999999999999999999987 6777888776
Q ss_pred ccccccccchHH-HHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecC
Q 001031 1019 SITSKWFGEGEK-YVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATN 1097 (1183)
Q Consensus 1019 ~L~s~~~GesE~-~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN 1097 (1183)
++.......... ....++.. .+ ...+|+|||||.+.++ ...++.+..+++.+... ..-+||++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~-~~-~~dll~iDDi~~i~~~---~~~~~~lf~lin~~~~~---------~~~iiits~~ 139 (213)
T d1l8qa2 74 DFAQAMVEHLKKGTINEFRNM-YK-SVDLLLLDDVQFLSGK---ERTQIEFFHIFNTLYLL---------EKQIILASDR 139 (213)
T ss_dssp HHHHHHHHHHHHTCHHHHHHH-HH-TCSEEEEECGGGGTTC---HHHHHHHHHHHHHHHHT---------TCEEEEEESS
T ss_pred HHHHHHHHHHHccchhhHHHH-Hh-hccchhhhhhhhhcCc---hHHHHHHHHHHHHHhhc---------cceEEEecCC
Confidence 654432221111 11222222 22 3479999999998432 23344555555554422 4456666666
Q ss_pred CCCC---CcHHHHhccC--cEEEecCCCHHHHHHHHHHHHhhccCC-ChhhHHHHHHHcCCCcHHHHHHHHHHHH
Q 001031 1098 RPFD---LDEAVVRRLP--RRLMVNLPDAPNREKIIRVILAKEELA-SDVDLEGIANMADGYSGSDLKNLCVTAA 1166 (1183)
Q Consensus 1098 ~p~~---Ld~aLlrRFd--~vI~I~lPd~eeR~eILk~iL~k~~l~-~didl~~LA~~TeGySg~DL~~L~~~Aa 1166 (1183)
.|.. +.+.+.+|+. .++.++ |+.++|.++++.++...++. ++..++.|++++. +.++|..+++.-+
T Consensus 140 ~p~~l~~~~~dL~SRL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l~~l~ 211 (213)
T d1l8qa2 140 HPQKLDGVSDRLVSRFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKIKLIK 211 (213)
T ss_dssp CGGGCTTSCHHHHHHHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHHHHHH
T ss_pred cchhccccchHHHHHhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcC--cHHHHHHHHHHhh
Confidence 6654 4588988864 467776 67789999999999887765 6667888998874 5788888776544
No 25
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.35 E-value=5.6e-12 Score=139.65 Aligned_cols=208 Identities=17% Similarity=0.236 Sum_probs=141.7
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccc-----c
Q 001031 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSK-----W 1024 (1183)
Q Consensus 950 DI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~-----~ 1024 (1183)
.|+|++++++.+.+.+...... + ..-.+|...+||+||+|+|||.||++||..++.+|+.++++++... .
T Consensus 23 ~viGQ~~a~~~v~~~v~~~~~~--l---~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~~~~l 97 (315)
T d1r6bx3 23 LVFGQDKAIEALTEAIKMARAG--L---GHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRL 97 (315)
T ss_dssp TSCSCHHHHHHHHHHHHHHHTT--C---SCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSCCSSS
T ss_pred eecChHHHHHHHHHHHHHHHcc--C---CCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhhhhhh
Confidence 5789999999998877532110 0 0113454569999999999999999999999999999999876432 2
Q ss_pred ccchHHHH-----HHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCc-------ccCCCCEEE
Q 001031 1025 FGEGEKYV-----KAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLR-------TKDKERVLV 1092 (1183)
Q Consensus 1025 ~GesE~~I-----r~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~-------~k~~~~VlV 1092 (1183)
.|....++ ..+.....+.+.+|+++||||..- ..+.+.|+..++... ..+-.+.++
T Consensus 98 ~g~~~gy~g~~~~~~l~~~~~~~~~~vvl~DeieKa~------------~~V~~~lLqild~G~ltd~~Gr~vdf~n~ii 165 (315)
T d1r6bx3 98 IGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH------------PDVFNILLQVMDNGTLTDNNGRKADFRNVVL 165 (315)
T ss_dssp CCCCSCSHHHHHTTHHHHHHHHCSSEEEEEETGGGSC------------HHHHHHHHHHHHHSEEEETTTEEEECTTEEE
T ss_pred cccCCCccccccCChhhHHHHhCccchhhhccccccc------------chHhhhhHHhhccceecCCCCCccCccceEE
Confidence 23221111 113344456677999999999861 234455555543211 123467899
Q ss_pred EEecCCC-------------------------CCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhc-------c--C-
Q 001031 1093 LAATNRP-------------------------FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-------E--L- 1137 (1183)
Q Consensus 1093 IaTTN~p-------------------------~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~-------~--l- 1137 (1183)
|+|+|-- ..+.+.|+.|++.++.+...+.++..+|+..++... . +
T Consensus 166 I~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~ii~f~~l~~~~~~~I~~~~l~~~~~~l~~~~i~l~ 245 (315)
T d1r6bx3 166 VMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLE 245 (315)
T ss_dssp EEEECSSCC-----------------CHHHHHHHSCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHhhhhhhhcccchhhhHHHHHHHHHHHHHHHHHHhcCcchh
Confidence 9999842 136789999999999999999999998887776541 1 1
Q ss_pred CChhhHHHHHHH--cCCCcHHHHHHHHHHHHHHhHHHHH
Q 001031 1138 ASDVDLEGIANM--ADGYSGSDLKNLCVTAAHCPIREIL 1174 (1183)
Q Consensus 1138 ~~didl~~LA~~--TeGySg~DL~~L~~~Aa~~Aire~l 1174 (1183)
..+..+..|+.. ...+-.+.|+.+++.-...++.+.+
T Consensus 246 ~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~~i~~~la~~i 284 (315)
T d1r6bx3 246 VSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANEL 284 (315)
T ss_dssp ECHHHHHHHHHHHCBTTTBTTTHHHHHHHHHTHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCCCChhhHHHHHHHHHHHHHHHHH
Confidence 244456667654 3456678898888887777766554
No 26
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.35 E-value=1.6e-11 Score=128.86 Aligned_cols=205 Identities=13% Similarity=0.052 Sum_probs=132.5
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEecCccccc
Q 001031 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSITSK 1023 (1183)
Q Consensus 948 fdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL----g~pfi~I~~s~L~s~ 1023 (1183)
++.++|.+..++.+.+++...+.++ ..++.++||+||||||||++++++++.+ ++.++.+++......
T Consensus 15 p~~l~~Re~ei~~l~~~l~~~l~~~--------~~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 86 (276)
T d1fnna2 15 PKRLPHREQQLQQLDILLGNWLRNP--------GHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNF 86 (276)
T ss_dssp CSCCTTCHHHHHHHHHHHHHHHHST--------TSSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCC--------CCCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhhh
Confidence 3568899999999888876433322 2345789999999999999999999997 466777766442111
Q ss_pred ----------------cccch-HHHHHHHHHHH-hccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCccc
Q 001031 1024 ----------------WFGEG-EKYVKAVFSLA-SKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK 1085 (1183)
Q Consensus 1024 ----------------~~Ges-E~~Ir~lF~~A-~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k 1085 (1183)
..+.. ......+.... ......++++|++|.+. .. .......+ +......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--------~~-~~~~~~~~---~~~~~~~ 154 (276)
T d1fnna2 87 TAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA--------PD-ILSTFIRL---GQEADKL 154 (276)
T ss_dssp HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC--------HH-HHHHHHHH---TTCHHHH
T ss_pred hhhhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhh--------hh-hhhhHHHH---Hhccccc
Confidence 11111 22223333333 33456788899999772 11 11111112 2111122
Q ss_pred CCCCEEEEEecCCC---CCCcHHHHhccC-cEEEecCCCHHHHHHHHHHHHhhcc---CCChhhHHHHHHHcC-------
Q 001031 1086 DKERVLVLAATNRP---FDLDEAVVRRLP-RRLMVNLPDAPNREKIIRVILAKEE---LASDVDLEGIANMAD------- 1151 (1183)
Q Consensus 1086 ~~~~VlVIaTTN~p---~~Ld~aLlrRFd-~vI~I~lPd~eeR~eILk~iL~k~~---l~~didl~~LA~~Te------- 1151 (1183)
...++.+|++++.. +.+++.+.+|+. ..+.++.|+.+++.+|++..+.... ...+..++.++..+.
T Consensus 155 ~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~~ 234 (276)
T d1fnna2 155 GAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDT 234 (276)
T ss_dssp SSCCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTCT
T ss_pred cccceEEeecCCchhhhhhcchhhhhhhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhhh
Confidence 34567888888764 567888888753 5689999999999999998876522 235566777887653
Q ss_pred -CCcHHHHHHHHHHHHHHhHHH
Q 001031 1152 -GYSGSDLKNLCVTAAHCPIRE 1172 (1183)
Q Consensus 1152 -GySg~DL~~L~~~Aa~~Aire 1172 (1183)
+-+.+.+.++|+.|+..|..+
T Consensus 235 ~~G~~R~a~~ll~~a~~~A~~~ 256 (276)
T d1fnna2 235 NRGDARLAIDILYRSAYAAQQN 256 (276)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHHHc
Confidence 224678888999888777655
No 27
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.33 E-value=1.4e-12 Score=135.11 Aligned_cols=156 Identities=22% Similarity=0.390 Sum_probs=113.2
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----------CCcEEEEec
Q 001031 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINISM 1017 (1183)
Q Consensus 948 fdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL----------g~pfi~I~~ 1017 (1183)
++.++|.++..+++.+.+.. +...++||.||||+|||+++..+|+.. +..++.++.
T Consensus 21 ld~~igRd~Ei~~l~~iL~r--------------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~ 86 (195)
T d1jbka_ 21 LDPVIGRDEEIRRTIQVLQR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 86 (195)
T ss_dssp SCCCCSCHHHHHHHHHHHTS--------------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECH
T ss_pred CCCCcCcHHHHHHHHHHHhc--------------cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 45678899888888776642 223589999999999999999999865 577999999
Q ss_pred Ccccc--ccccchHHHHHHHHHHHhccC-CeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEE
Q 001031 1018 SSITS--KWFGEGEKYVKAVFSLASKIA-PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA 1094 (1183)
Q Consensus 1018 s~L~s--~~~GesE~~Ir~lF~~A~k~~-PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIa 1094 (1183)
+.+.. .+.|+.+..+..++..+.+.. ..||||||++.|++.....+..... .++.-.+ . ...+.+|+
T Consensus 87 ~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g~~d~~-~~Lkp~L---~------rg~l~~Ig 156 (195)
T d1jbka_ 87 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAG-NMLKPAL---A------RGELHCVG 156 (195)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT------CCCCH-HHHHHHH---H------TTSCCEEE
T ss_pred HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCCcccHH-HHHHHHH---h------CCCceEEe
Confidence 88774 456788999999998886654 6799999999998543322111111 2222222 1 25678888
Q ss_pred ecCC-----CCCCcHHHHhccCcEEEecCCCHHHHHHHH
Q 001031 1095 ATNR-----PFDLDEAVVRRLPRRLMVNLPDAPNREKII 1128 (1183)
Q Consensus 1095 TTN~-----p~~Ld~aLlrRFd~vI~I~lPd~eeR~eIL 1128 (1183)
+|.. ...-+++|.+|| ..|.+..|+.++-..|+
T Consensus 157 atT~eey~~~~e~d~aL~rrF-~~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 157 ATTLDEYRQYIEKDAALERRF-QKVFVAEPSVEDTIAIL 194 (195)
T ss_dssp EECHHHHHHHTTTCHHHHTTE-EEEECCCCCHHHHHTTC
T ss_pred cCCHHHHHHHHHcCHHHHhcC-CEeecCCCCHHHHHHHh
Confidence 8854 245689999999 78999999998877664
No 28
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.32 E-value=7e-12 Score=138.98 Aligned_cols=209 Identities=16% Similarity=0.249 Sum_probs=142.7
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCcccc----
Q 001031 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS---- 1022 (1183)
Q Consensus 950 DI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s---- 1022 (1183)
.|+|++++++.+...+...... -..-.+|...+||+||+|+|||.+|+.+|..+ +.+++.++++++..
T Consensus 24 ~v~GQ~~ai~~v~~~i~~~~~~-----l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~~~~~ 98 (315)
T d1qvra3 24 RVVGQDEAIRAVADAIRRARAG-----LKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAV 98 (315)
T ss_dssp HSCSCHHHHHHHHHHHHHHGGG-----CSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCSSGGG
T ss_pred eEeCHHHHHHHHHHHHHHHhcC-----CCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEeccccccchhh
Confidence 5789999999998877542110 01113454468999999999999999999998 78999999987643
Q ss_pred -ccccchHHHH-----HHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcc-------cCCCC
Q 001031 1023 -KWFGEGEKYV-----KAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT-------KDKER 1089 (1183)
Q Consensus 1023 -~~~GesE~~I-----r~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~-------k~~~~ 1089 (1183)
..+|....++ ..+....++++.+||+|||||..- ..+.+.|+..++.... ..-.+
T Consensus 99 ~~L~g~~~gyvG~~~~~~l~~~~~~~p~~Vvl~DEieK~~------------~~v~~~ll~~l~~g~~~~~~gr~v~~~~ 166 (315)
T d1qvra3 99 SRLIGAPPGYVGYEEGGQLTEAVRRRPYSVILFDEIEKAH------------PDVFNILLQILDDGRLTDSHGRTVDFRN 166 (315)
T ss_dssp GGC--------------CHHHHHHHCSSEEEEESSGGGSC------------HHHHHHHHHHHTTTEECCSSSCCEECTT
T ss_pred hhhcCCCCCCcCcccCChHHHHHHhCCCcEEEEehHhhcC------------HHHHHHHHHHhccCceeCCCCcEecCcc
Confidence 2233332222 123344456667999999999861 2344555555543211 12467
Q ss_pred EEEEEecCC--------------------------CCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhc-------c
Q 001031 1090 VLVLAATNR--------------------------PFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE-------E 1136 (1183)
Q Consensus 1090 VlVIaTTN~--------------------------p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~-------~ 1136 (1183)
+++|+|||- ...+.++|+.||+.++.+...+.++..+|+...+.+. .
T Consensus 167 ~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEflnRid~Ii~F~~L~~~~~~~I~~~~l~~l~~rl~~~~ 246 (315)
T d1qvra3 167 TVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQIRQIVEIQLSYLRARLAEKR 246 (315)
T ss_dssp EEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHHTCSBCCBCCCCCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred eEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHhcCCeeeeccchhhhhhHHHHHHHHHHHHHHHHhcc
Confidence 999999994 2458899999999999999999999999887766541 1
Q ss_pred C---CChhhHHHHHHH--cCCCcHHHHHHHHHHHHHHhHHHHHh
Q 001031 1137 L---ASDVDLEGIANM--ADGYSGSDLKNLCVTAAHCPIREILE 1175 (1183)
Q Consensus 1137 l---~~didl~~LA~~--TeGySg~DL~~L~~~Aa~~Aire~le 1175 (1183)
+ ..+..++.|++. ...|-.+.|+.+++.....++.+.+-
T Consensus 247 i~l~i~~~~~~~L~~~~y~~~~GAR~L~r~Ie~~i~~~La~~iL 290 (315)
T d1qvra3 247 ISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKIL 290 (315)
T ss_dssp CEEEECHHHHHHHHHHHCBTTTBTSTHHHHHHHHTHHHHHHHHH
T ss_pred ccccccHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 1 144456777775 34566789999999988888866653
No 29
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.28 E-value=4e-11 Score=124.83 Aligned_cols=169 Identities=16% Similarity=0.143 Sum_probs=113.4
Q ss_pred CcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCC----------------------
Q 001031 953 ALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGA---------------------- 1010 (1183)
Q Consensus 953 Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~---------------------- 1010 (1183)
.++.+.+.|...+.. .+.++++||+||+|+|||++|+.+|+.+..
T Consensus 6 w~~~~~~~l~~~~~~-------------~~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~ 72 (207)
T d1a5ta2 6 WLRPDFEKLVASYQA-------------GRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT 72 (207)
T ss_dssp GGHHHHHHHHHHHHT-------------TCCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHHc-------------CCcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhcc
Confidence 455666777665542 345577999999999999999999998731
Q ss_pred --cEEEEecCccccccccchHHHHHHHHHHHh----ccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcc
Q 001031 1011 --NFINISMSSITSKWFGEGEKYVKAVFSLAS----KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRT 1084 (1183)
Q Consensus 1011 --pfi~I~~s~L~s~~~GesE~~Ir~lF~~A~----k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~ 1084 (1183)
.++.+.... .... -....++.+...+. .....|++|||+|.|. ....+.|+..++.
T Consensus 73 ~~~~~~~~~~~-~~~~--i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l~------------~~a~n~Llk~lEe--- 134 (207)
T d1a5ta2 73 HPDYYTLAPEK-GKNT--LGVDAVREVTEKLNEHARLGGAKVVWVTDAALLT------------DAAANALLKTLEE--- 134 (207)
T ss_dssp CTTEEEECCCT-TCSS--BCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGBC------------HHHHHHHHHHHTS---
T ss_pred ccccchhhhhh-cccc--cccchhhHHhhhhhhccccCccceEEechhhhhh------------hhhhHHHHHHHHh---
Confidence 122222111 0000 11234555555443 2345699999999982 2234555555554
Q ss_pred cCCCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCCChhhHHHHHHHcCCCcHHHH
Q 001031 1085 KDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGIANMADGYSGSDL 1158 (1183)
Q Consensus 1085 k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~~didl~~LA~~TeGySg~DL 1158 (1183)
.+.++++|++|+.+..|.+++++|+ ..+.|+.|+.++...+++.. .. .++..+..+++.++|--+..|
T Consensus 135 -p~~~~~fIl~t~~~~~ll~tI~SRc-~~i~~~~~~~~~~~~~L~~~---~~-~~~~~~~~i~~~s~Gs~r~al 202 (207)
T d1a5ta2 135 -PPAETWFFLATREPERLLATLRSRC-RLHYLAPPPEQYAVTWLSRE---VT-MSQDALLAALRLSAGSPGAAL 202 (207)
T ss_dssp -CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCCHHHHHHHHHHH---CC-CCHHHHHHHHHHTTTCHHHHH
T ss_pred -hcccceeeeeecChhhhhhhhccee-EEEecCCCCHHHHHHHHHHc---CC-CCHHHHHHHHHHcCCCHHHHH
Confidence 3467999999999999999999999 88999999988877776532 22 356668888888887544444
No 30
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.27 E-value=8.7e-12 Score=121.01 Aligned_cols=97 Identities=25% Similarity=0.320 Sum_probs=79.9
Q ss_pred cceeccccCCCCceeee-------------cceeEEccCCccceeecC-CCCCccceEEEEeecCCcceEEEEEecCCce
Q 001031 134 WARLISQCSQNSHLSMT-------------GAVFTVGHNRQCDLYLKD-PSISKNLCRLRRIENGGPSGALLEITGGKGE 199 (1183)
Q Consensus 134 W~rL~s~~~~~p~~~i~-------------~~~~t~G~~~~cd~~l~d-~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~ 199 (1183)
=|||+....++|...+. +..|||||+..||+.+.| +.+|..||+|... .++ .+++++.|+|||
T Consensus 5 ~~~l~~t~g~~p~~~L~~~~~~~~~~~~~~~~~~~iGR~~~~d~~l~d~~~VSr~Ha~i~~~-~~~--~~~~d~~S~NGT 81 (127)
T d1g6ga_ 5 VCRVICTTGQIPIRDLSADISQVLKEKRSIKKVWTFGRNPACDYHLGNISRLSNKHFQILLG-EDG--NLLLNDISTNGT 81 (127)
T ss_dssp EEEEEESSSSSCCEEEEECHHHHHHCCSSCCEEEEEESSTTSSEECCSCTTSCSSCEEEEEC-TTS--CEEEEECCSSCC
T ss_pred EEEEEecCCCCCcEEEEecCCceeEEEecCCccEEEccCcccCccCCCcchhhHHHHHeeec-ccE--EEEEECCCccee
Confidence 47888888888865544 356999999999999986 6899999999864 233 378999999999
Q ss_pred EEEcCeecCCCceEEeeCCCEEEEccCC---CeeEEee
Q 001031 200 VEVNGNVHPKDSQVVLRGGDELVFSPSG---KHSYIFQ 234 (1183)
Q Consensus 200 v~vNg~~~~k~~~~~L~~gDev~f~~~~---~~ayifq 234 (1183)
+|||+++.++..++|++||+|.|+... -..|+++
T Consensus 82 -~vNg~~l~~~~~~~L~~GD~I~iG~~~~~~~v~~~~~ 118 (127)
T d1g6ga_ 82 -WLNGQKVEKNSNQLLSQGDEITVGVGVESDILSLVIF 118 (127)
T ss_dssp -EETTEECCTTCCEECCTTCEEEECTTSGGGCEEEEEE
T ss_pred -EECCEEecCCCEEEcCCCCEEEECCCCCCceEEEEEE
Confidence 699999999999999999999999764 3445443
No 31
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.26 E-value=3.3e-11 Score=127.10 Aligned_cols=215 Identities=13% Similarity=0.003 Sum_probs=129.8
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC---------CcEEEEecC
Q 001031 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---------ANFINISMS 1018 (1183)
Q Consensus 948 fdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg---------~pfi~I~~s 1018 (1183)
.+.+.|.+...+.|.+.+..++.+. ..-..+...++|+||||||||++++++++++. ..++.+++.
T Consensus 15 P~~~~~Re~e~~~l~~~l~~~~~~~-----~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 89 (287)
T d1w5sa2 15 PPELRVRRGEAEALARIYLNRLLSG-----AGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAF 89 (287)
T ss_dssp CSSCSSSCHHHHHHHHHHHHHHHTS-----SCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcC-----CCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeeccc
Confidence 3467788888888877665433211 11011222467899999999999999998862 445555554
Q ss_pred ccccc----------------cccchHHHHHHHHH-HHh-ccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhc
Q 001031 1019 SITSK----------------WFGEGEKYVKAVFS-LAS-KIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWD 1080 (1183)
Q Consensus 1019 ~L~s~----------------~~GesE~~Ir~lF~-~A~-k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ld 1080 (1183)
..... ..+.....+...+. ... ...+.++++||+|.+....... .+.. ..+..++..+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~~~--~~~~-~~l~~l~~~l~ 166 (287)
T d1w5sa2 90 NAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPRIA--AEDL-YTLLRVHEEIP 166 (287)
T ss_dssp GCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTTSC--HHHH-HHHHTHHHHSC
T ss_pred cccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccccc--hhHH-HHHHHHHHhcc
Confidence 42211 11222333333333 222 3345788899999986444322 1221 12222333333
Q ss_pred CCcccCCCCEEEEEecCCCCC------CcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhcc---CCChhhHHHHHHHcC
Q 001031 1081 GLRTKDKERVLVLAATNRPFD------LDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEE---LASDVDLEGIANMAD 1151 (1183)
Q Consensus 1081 gl~~k~~~~VlVIaTTN~p~~------Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~---l~~didl~~LA~~Te 1151 (1183)
... ....+.+|+.++..+. ..+.+.+||...+.++.++.++..+|++..++... ..++..++.+|+.+.
T Consensus 167 ~~~--~~~~~~~i~i~~~~~~~~~~~~~~~~~~~r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia~~~~ 244 (287)
T d1w5sa2 167 SRD--GVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELISDVYG 244 (287)
T ss_dssp CTT--SCCBEEEEEEEEETHHHHHHHHHCHHHHTTCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHHHHHC
T ss_pred hhh--cccceeEEeecccHHHHHHHHhhccchhcccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHHHHHh
Confidence 322 2245666666654432 33677789999999999999999999998876532 234556888888774
Q ss_pred C-----CcHHHHHHHHHHHHHHhHHH
Q 001031 1152 G-----YSGSDLKNLCVTAAHCPIRE 1172 (1183)
Q Consensus 1152 G-----ySg~DL~~L~~~Aa~~Aire 1172 (1183)
. ...+...++|+.|+..|..+
T Consensus 245 ~~~~~~gd~R~ai~~l~~a~~~A~~~ 270 (287)
T d1w5sa2 245 EDKGGDGSARRAIVALKMACEMAEAM 270 (287)
T ss_dssp GGGTSCCCHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHc
Confidence 2 24567778888888777654
No 32
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.24 E-value=3.7e-12 Score=143.78 Aligned_cols=174 Identities=13% Similarity=0.104 Sum_probs=108.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccccchHHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcch
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGE 1064 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~GesE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~ 1064 (1183)
+++||+||||||||++|+++|+.++.+|+.+++++..+.+ .......+.+.++|+++.....+.....
T Consensus 155 ~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~------------~l~~~~~~~~~l~d~~~~~~~~~~~~~~ 222 (362)
T d1svma_ 155 RYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNF------------ELGVAIDQFLVVFEDVKGTGGESRDLPS 222 (362)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHH------------HHGGGTTCSCEEETTCCCSTTTTTTCCC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHH------------HHHhHHHHHHHHHHHHHHhhhhccCCCC
Confidence 5899999999999999999999999999999988765432 1222223344555555544322211100
Q ss_pred HHHHHHHHHHHHHhhcCCccc----CC-CC-----EEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHH-HHHHHHHh
Q 001031 1065 HEAMRKMKNEFMVNWDGLRTK----DK-ER-----VLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNRE-KIIRVILA 1133 (1183)
Q Consensus 1065 ~e~l~~il~~LL~~Ldgl~~k----~~-~~-----VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~-eILk~iL~ 1133 (1183)
.-... -+..+...++|.... .+ .. ..+|+|||.... ......||+..+.+..|+...|. +++..++.
T Consensus 223 ~~~~D-eiD~l~~~~dg~~~~~~~~~~~~~~~~~~~p~i~ttN~~~~-~~~r~~Rf~~~i~~~~~~~~~~~~~~l~~i~~ 300 (362)
T d1svma_ 223 GQGIN-NLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIVTMNEYSV-PKTLQARFVKQIDFRPKDYLKHCLERSEFLLE 300 (362)
T ss_dssp CSHHH-HHHTTHHHHHCSSCEEECCSSSCCEEECCCCEEEEECSCCC-CHHHHTTEEEEEECCCCHHHHHHHHTCTHHHH
T ss_pred eEEEe-hHhhcccccCCcchhhhhhhhhchhhhccCCceeecccccc-cccccccCceEEeecCCCcHHHHHHHHHHHhc
Confidence 00111 112223333332110 00 11 137888996421 12222399999999888876664 56666777
Q ss_pred hccCCChhhHHHHHHHcCCCcHHHHHHHHHHHHHHhHHHHH
Q 001031 1134 KEELASDVDLEGIANMADGYSGSDLKNLCVTAAHCPIREIL 1174 (1183)
Q Consensus 1134 k~~l~~didl~~LA~~TeGySg~DL~~L~~~Aa~~Aire~l 1174 (1183)
+..+. .+.+.|+..+.|++++|+.++++.++..+.+++.
T Consensus 301 ~~~l~--~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~ 339 (362)
T d1svma_ 301 KRIIQ--SGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLD 339 (362)
T ss_dssp TTCTT--CHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHH
T ss_pred ccCCC--CCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 66654 4456788888899999999999999887776653
No 33
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.23 E-value=9.5e-12 Score=125.07 Aligned_cols=92 Identities=18% Similarity=0.285 Sum_probs=76.7
Q ss_pred cceeccccC--CCCceeeec--ceeEEccCCccceeecCCCCCccceEEEEeec-----------CCcceEEEEEecCCc
Q 001031 134 WARLISQCS--QNSHLSMTG--AVFTVGHNRQCDLYLKDPSISKNLCRLRRIEN-----------GGPSGALLEITGGKG 198 (1183)
Q Consensus 134 W~rL~s~~~--~~p~~~i~~--~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~-----------~g~~~a~le~~~~~G 198 (1183)
|-.|.+... ...++.|.. ..|+|||+..||+.++++.+|..||.|..... .+...+||+|.|+||
T Consensus 5 f~~L~~l~~~~~~~~i~i~~~~~~~~iGR~~~~d~~i~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~~l~D~S~NG 84 (158)
T d1dmza_ 5 FLTLKPLPDSIIQESLEIQQGVNPFFIGRSEDCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHTGTNV 84 (158)
T ss_dssp CEEEEECTTSSCCCCEEETTSCSCEEEESSTTSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEECSTTC
T ss_pred eEEEEEccCCCcceeEEEccCCCcEEecCCcCccEEECCCcccCcceEEEEeccccccccccccccCCCcEEEEecCCCC
Confidence 566766543 345788875 46999999999999999999999999987631 223468999999999
Q ss_pred eEEEcCeecCCCceEEeeCCCEEEEccC
Q 001031 199 EVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1183)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1183)
| +|||++++|+.++.|++||+|.|+..
T Consensus 85 t-~vN~~~~~~~~~~~l~~gD~i~~~~~ 111 (158)
T d1dmza_ 85 S-YLNNNRMIQGTKFLLQDGDEIKIIWD 111 (158)
T ss_dssp C-EETTEECCSSEEEECCSSCCEESCCC
T ss_pred e-EECCEEcCCCceEECCCCCEEEEccC
Confidence 9 79999999999999999999999654
No 34
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.23 E-value=4.2e-11 Score=136.09 Aligned_cols=197 Identities=22% Similarity=0.342 Sum_probs=120.9
Q ss_pred CcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----------CCcEEEEe
Q 001031 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----------GANFINIS 1016 (1183)
Q Consensus 947 tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL----------g~pfi~I~ 1016 (1183)
.++-++|.+.-.+++.+.+.. +...++||.|+||+|||+++..+|... +..++.++
T Consensus 20 ~ld~~~gr~~ei~~~~~~L~r--------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld 85 (387)
T d1qvra2 20 KLDPVIGRDEEIRRVIQILLR--------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQ 85 (387)
T ss_dssp CSCCCCSCHHHHHHHHHHHHC--------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEEC
T ss_pred CCCCCcCcHHHHHHHHHHHhc--------------CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEee
Confidence 345688999988888887752 222568999999999999999999865 45689999
Q ss_pred cCcccc--ccccchHHHHHHHHHHHhccC-CeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEE
Q 001031 1017 MSSITS--KWFGEGEKYVKAVFSLASKIA-PSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVL 1093 (1183)
Q Consensus 1017 ~s~L~s--~~~GesE~~Ir~lF~~A~k~~-PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVI 1093 (1183)
+..+.. .|.|+.+..+..++..+.... +.||||||++.|++.....+...+. .++.-.+ ..+.+.+|
T Consensus 86 ~~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~~g~~d~a-~~Lkp~L---------~rg~~~~I 155 (387)
T d1qvra2 86 MGSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKAEGAVDAG-NMLKPAL---------ARGELRLI 155 (387)
T ss_dssp C-----------CHHHHHHHHHHHHHTTCSSEEEEECCC--------------------HHHH---------HTTCCCEE
T ss_pred HhhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCCCCcccHH-HHHHHHH---------hCCCccee
Confidence 988875 467899999999999887765 6789999999998654332222222 2222222 12567888
Q ss_pred EecCCC----CCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhc----cCC-ChhhHHHHHHHc-----CCCcHHHHH
Q 001031 1094 AATNRP----FDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKE----ELA-SDVDLEGIANMA-----DGYSGSDLK 1159 (1183)
Q Consensus 1094 aTTN~p----~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~----~l~-~didl~~LA~~T-----eGySg~DL~ 1159 (1183)
++|..- ..=|++|.||| ..|.|..|+.++-..|++.+.... ++. .+..+.....++ +.+-|..--
T Consensus 156 ~~tT~~ey~~~e~d~al~rrF-~~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdKAi 234 (387)
T d1qvra2 156 GATTLDEYREIEKDPALERRF-QPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAI 234 (387)
T ss_dssp EEECHHHHHHHTTCTTTCSCC-CCEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHHHH
T ss_pred eecCHHHHHHhcccHHHHHhc-ccccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhhHH
Confidence 888531 13378999999 789999999999999998876542 221 344455444433 234444444
Q ss_pred HHHHHHHHH
Q 001031 1160 NLCVTAAHC 1168 (1183)
Q Consensus 1160 ~L~~~Aa~~ 1168 (1183)
.|+++|+.+
T Consensus 235 dlld~a~a~ 243 (387)
T d1qvra2 235 DLIDEAAAR 243 (387)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 455555543
No 35
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.22 E-value=4.1e-11 Score=135.19 Aligned_cols=221 Identities=18% Similarity=0.275 Sum_probs=131.6
Q ss_pred cccCcHHHHHHHHHHHHcccCChhh---hhc-------------CCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001031 950 DIGALENVKDTLKELVMLPLQRPEL---FCK-------------GQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1183)
Q Consensus 950 DI~Gle~vk~~L~e~V~lpl~~~el---f~k-------------~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi 1013 (1183)
.|+|++++++.+..++..-.++... ..+ .....|+.++||.||+|+|||.||+++|..++.+|+
T Consensus 18 ~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~niLfiGPTGvGKTElAk~LA~~~~~~~i 97 (364)
T d1um8a_ 18 YVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIA 97 (364)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEE
T ss_pred eecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCcceeeeCCCCccHHHHHHHHHhhccccee
Confidence 4789999999887666321111000 000 011457788999999999999999999999999999
Q ss_pred EEecCcccc-ccccch-HHHHHHHHHHH----hccCCeEEEEeCCcccccCCCCcc--hHHHHHHHHHHHHHhhcCCcc-
Q 001031 1014 NISMSSITS-KWFGEG-EKYVKAVFSLA----SKIAPSVVFVDEVDSMLGRRENPG--EHEAMRKMKNEFMVNWDGLRT- 1084 (1183)
Q Consensus 1014 ~I~~s~L~s-~~~Ges-E~~Ir~lF~~A----~k~~PsILfIDEID~Ll~~r~~~~--~~e~l~~il~~LL~~Ldgl~~- 1084 (1183)
.++++.+.. .|+|.. +..+..+...+ .+.+.+|+++||+|...+...... ...+...+.+.|+..+++...
T Consensus 98 r~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~~~ 177 (364)
T d1um8a_ 98 ISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSLVN 177 (364)
T ss_dssp EEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCEEC
T ss_pred ehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCceec
Confidence 999988764 344432 34556655543 345678999999999764321111 111233456666666664210
Q ss_pred --------cCCCCEEEEEecCC-------------------------------------------------CCCCcHHHH
Q 001031 1085 --------KDKERVLVLAATNR-------------------------------------------------PFDLDEAVV 1107 (1183)
Q Consensus 1085 --------k~~~~VlVIaTTN~-------------------------------------------------p~~Ld~aLl 1107 (1183)
....+.+++.|+|- +..+.|+|+
T Consensus 178 ~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PEf~ 257 (364)
T d1um8a_ 178 IPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELI 257 (364)
T ss_dssp ---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHHHH
T ss_pred cCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHHHH
Confidence 11234455555553 123678999
Q ss_pred hccCcEEEecCCCHHHHHHHHHH----H-------HhhccC---CChhhHHHHHHH--cCCCcHHHHHHHHHHHHHHhH
Q 001031 1108 RRLPRRLMVNLPDAPNREKIIRV----I-------LAKEEL---ASDVDLEGIANM--ADGYSGSDLKNLCVTAAHCPI 1170 (1183)
Q Consensus 1108 rRFd~vI~I~lPd~eeR~eILk~----i-------L~k~~l---~~didl~~LA~~--TeGySg~DL~~L~~~Aa~~Ai 1170 (1183)
.||+.++.|...+.++..+|+.. + +...++ ..+..++.||.. ...|-.+-|+.+++.......
T Consensus 258 gRi~~iv~f~~L~~~~l~~Il~~~~~~l~kq~~~~l~~~gi~L~~td~a~~~la~~g~d~~~GAR~L~riie~~l~~~~ 336 (364)
T d1um8a_ 258 GRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIM 336 (364)
T ss_dssp TTCCEEEECCCCCHHHHHHHHHSSTTCHHHHHHHHHHTTTCEEEECHHHHHHHHHHHHHTTCTGGGHHHHHHHHHHHHH
T ss_pred HHhcchhhHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEECHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHh
Confidence 99999999999999999998863 2 222222 144556777754 235666777777766544443
No 36
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=2.7e-11 Score=113.13 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=70.9
Q ss_pred ceecccc--CCCCceeee--cceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEecCCceEEEcCeecCCC
Q 001031 135 ARLISQC--SQNSHLSMT--GAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGGKGEVEVNGNVHPKD 210 (1183)
Q Consensus 135 ~rL~s~~--~~~p~~~i~--~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~~G~v~vNg~~~~k~ 210 (1183)
||||=++ .+.|.+.+. ...++|||+..|+ +.|+.+|..||+|+....++. +++++.|+||| +|||+++.|+
T Consensus 1 grl~l~~p~g~~p~i~l~~~~~~~~iGR~~~~~--i~d~~vSr~Ha~i~~~~~~~~--~~v~~~s~Ngt-~vNg~~l~~~ 75 (101)
T d2brfa1 1 GRLWLESPPGEAPPIFLPSDGQALVLGRGPLTQ--VTDRKCSRTQVELVADPETRT--VAVKQLGVNPS-TTGTQELKPG 75 (101)
T ss_dssp CEEEEECSTTSSCCEECCSTTCCEEECSBTTTT--BCCTTSCSSCEEEEEETTTTE--EEEEECSSSCC-EEC-CBCCTT
T ss_pred CeEEEEecCCCCCcEEEecCCCeEEcccCcccc--ccCCCcChhheEEEeccCcee--EEEEcCCCcce-EEEEEEeccc
Confidence 3444444 466766654 6789999976655 589999999999986544443 78999999999 6999999999
Q ss_pred ceEEeeCCCEEEEccCCCeeEE
Q 001031 211 SQVVLRGGDELVFSPSGKHSYI 232 (1183)
Q Consensus 211 ~~~~L~~gDev~f~~~~~~ayi 232 (1183)
+.+.|++||+|.++ .+++-|+
T Consensus 76 ~~~~L~~GD~i~l~-~~~~~y~ 96 (101)
T d2brfa1 76 LEGSLGVGDTLYLV-NGLHPLT 96 (101)
T ss_dssp CEEEEETTCEEEEE-TTEEEEE
T ss_pred eeeECCCCCEEEEc-CCeEEEE
Confidence 99999999999996 3444444
No 37
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.19 E-value=2.6e-10 Score=131.69 Aligned_cols=77 Identities=27% Similarity=0.349 Sum_probs=54.9
Q ss_pred cccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCcccc-cccc
Q 001031 950 DIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS-KWFG 1026 (1183)
Q Consensus 950 DI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s-~~~G 1026 (1183)
-|+|++++|+.|--.+..-.+|..+-......-.+++|||.||+|||||.||++||+.++.||+.+++..+.. .|+|
T Consensus 15 yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG 92 (443)
T d1g41a_ 15 HIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG 92 (443)
T ss_dssp TCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CC
T ss_pred cccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeecceee
Confidence 3899999999998777532221111111111223578999999999999999999999999999999988764 2444
No 38
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.19 E-value=2.8e-11 Score=133.87 Aligned_cols=161 Identities=21% Similarity=0.317 Sum_probs=96.0
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC----------------
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---------------- 1009 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg---------------- 1009 (1183)
..|.+|.|++.+|..|.-.+..+ ..++|||+||||||||+||++++..+.
T Consensus 4 ~~f~~I~Gq~~~kral~laa~~~--------------~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~~ 69 (333)
T d1g8pa_ 4 FPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVE 69 (333)
T ss_dssp CCGGGSCSCHHHHHHHHHHHHCG--------------GGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSGG
T ss_pred CChhhccCcHHHHHHHHHHHhcc--------------CCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCccc
Confidence 46899999999998776444310 114799999999999999999998761
Q ss_pred -----------------CcEEEEecCccccccccch--HHHHH--------HHHHHHhccCCeEEEEeCCcccccCCCCc
Q 001031 1010 -----------------ANFINISMSSITSKWFGEG--EKYVK--------AVFSLASKIAPSVVFVDEVDSMLGRRENP 1062 (1183)
Q Consensus 1010 -----------------~pfi~I~~s~L~s~~~Ges--E~~Ir--------~lF~~A~k~~PsILfIDEID~Ll~~r~~~ 1062 (1183)
.+++......-.+..+|.. +.... +.+..| ..+|+|||||+.+ ++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~g~~~~~~G~l~~A---~~gvl~iDEi~~~-----~~ 141 (333)
T d1g8pa_ 70 MIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARA---NRGYLYIDECNLL-----ED 141 (333)
T ss_dssp GSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEECHHHHHHHCGGGEECCHHHHH---TTEEEEETTGGGS-----CH
T ss_pred cccchhhccccCcccccCceeeccCCCCcccccCcchhhhccccCcceeeccccccc---cccEeecccHHHH-----HH
Confidence 1122211111111111110 00000 112222 2489999999977 33
Q ss_pred chHHHHHHHHHHHHHhh--cCCcccCCCCEEEEEecCCC-CCCcHHHHhccCcEEEecCC-CHHHHHHHH
Q 001031 1063 GEHEAMRKMKNEFMVNW--DGLRTKDKERVLVLAATNRP-FDLDEAVVRRLPRRLMVNLP-DAPNREKII 1128 (1183)
Q Consensus 1063 ~~~e~l~~il~~LL~~L--dgl~~k~~~~VlVIaTTN~p-~~Ld~aLlrRFd~vI~I~lP-d~eeR~eIL 1128 (1183)
..++.+...+++-...+ .|....-+.++++|+|+|+. ..+.+++++||+..+.+..| +...+.++.
T Consensus 142 ~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llDRf~~~i~v~~~~~~~~~~~~~ 211 (333)
T d1g8pa_ 142 HIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLDRFGLSVEVLSPRDVETRVEVI 211 (333)
T ss_dssp HHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHTTCSEEEECCCCCSHHHHHHHH
T ss_pred HHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhhhhcceeeccCcchhhHHHHHH
Confidence 33333333333222222 23333335778999999975 56999999999988888766 445555444
No 39
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=1e-10 Score=113.32 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=80.8
Q ss_pred ccceeccccCCCCceeee-cceeEEccCCccceeecCCC----CCccceEEEEeecCCcceEEEEEe-cCCceEEEcCee
Q 001031 133 PWARLISQCSQNSHLSMT-GAVFTVGHNRQCDLYLKDPS----ISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNV 206 (1183)
Q Consensus 133 pW~rL~s~~~~~p~~~i~-~~~~t~G~~~~cd~~l~d~~----~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~ 206 (1183)
+|+ |......-..+.+. +..+||||+..||+.|+++. ||..||+|...+ +|. ++|.|. |.||| +|||..
T Consensus 5 ~w~-L~r~g~~~~~~~l~~~~~~tiGR~~~~~~~l~~~~~~~~VSR~Ha~i~~~~-~g~--~~l~D~~S~NGt-~lNg~~ 79 (127)
T d2piea1 5 SWC-LRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMISRNHCVLKQNP-EGQ--WTIMDNKSLNGV-WLNRAR 79 (127)
T ss_dssp EEE-EEETTCSSCBEEECTTCCEEEESSSSSSEECCCSSCTTSSCSSCEEEEECT-TSC--EEEEECSCSSCE-EETTEE
T ss_pred eEE-EEEccCCCCeEEcCCCCEEEeccCCCccEEECCCCcccccchhheEEEECC-CCe--EEEEECCCcCCe-EECCEE
Confidence 674 34444455556664 68899999999999999986 899999999653 344 678887 79998 799999
Q ss_pred cCCCceEEeeCCCEEEEccC----CCeeEEeeecCc
Q 001031 207 HPKDSQVVLRGGDELVFSPS----GKHSYIFQQLSD 238 (1183)
Q Consensus 207 ~~k~~~~~L~~gDev~f~~~----~~~ayifq~l~~ 238 (1183)
+.+++.+.|+.||.|.|+.+ .+..|.|+.+..
T Consensus 80 l~~~~~~~L~~GD~I~iG~p~~~~~~~~f~~~~~~~ 115 (127)
T d2piea1 80 LEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEE 115 (127)
T ss_dssp CCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEEEE
T ss_pred ccCCceeEcCCCCEEEeCCCCCCCcceEEEEEeCcc
Confidence 99999999999999999865 456788886543
No 40
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.11 E-value=1.8e-10 Score=106.87 Aligned_cols=91 Identities=20% Similarity=0.288 Sum_probs=73.7
Q ss_pred ccceeccccCCCCceeeecceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEe-cCCceEEEcCeecCCCc
Q 001031 133 PWARLISQCSQNSHLSMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPKDS 211 (1183)
Q Consensus 133 pW~rL~s~~~~~p~~~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k~~ 211 (1183)
+++.|....+. ...++....++|||+..||+.++|+.+|..||+|... ++. .+|+|. |.||| +|||+++.+
T Consensus 5 ~~~~l~~~~~G-~~~~l~~~~~~IGR~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGt-~vNg~~i~~-- 76 (99)
T d2ff4a3 5 AVAYLHDIASG-RGYPLQAAATRIGRLHDNDIVLDSANVSRHHAVIVDT--GTN--YVINDLRSSNGV-HVQHERIRS-- 76 (99)
T ss_dssp CCCEEEETTTC-CEEECCSSEEEEESSTTSSEECCCTTSCTTCEEEEEC--SSC--EEEEECSCSSCC-EETTEECSS--
T ss_pred cEEEEEcCCCC-CEEEECCCCEEEeeCcCCCEEECCccccceeEEEEEe--CCE--EEEEECCCcCCC-eECCEEcCC--
Confidence 55555554433 3567788999999999999999999999999999864 333 789996 67899 699999964
Q ss_pred eEEeeCCCEEEEccCCCeeEEee
Q 001031 212 QVVLRGGDELVFSPSGKHSYIFQ 234 (1183)
Q Consensus 212 ~~~L~~gDev~f~~~~~~ayifq 234 (1183)
.++|++||+|.|+ ..-+.|+
T Consensus 77 ~~~L~~Gd~i~iG---~~~~~f~ 96 (99)
T d2ff4a3 77 AVTLNDGDHIRIC---DHEFTFQ 96 (99)
T ss_dssp EEEECTTCEEEET---TEEEEEE
T ss_pred ceECCCCCEEEEC---CEEEEEE
Confidence 6899999999995 5677776
No 41
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02 E-value=4.6e-10 Score=103.71 Aligned_cols=82 Identities=24% Similarity=0.467 Sum_probs=69.8
Q ss_pred CCceeeecceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEecCC-ceEEEcCeecCCCceEEeeCCCEEE
Q 001031 144 NSHLSMTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGGK-GEVEVNGNVHPKDSQVVLRGGDELV 222 (1183)
Q Consensus 144 ~p~~~i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~~-G~v~vNg~~~~k~~~~~L~~gDev~ 222 (1183)
-+..+|....|+|||+..||+.|+|+.+|..||+|...+ +. ++|++.++. |+ +|||+.+.+ .++|..||+|.
T Consensus 15 g~~~~L~~~~~~IGr~~~~di~l~~~~is~~Ha~i~~~~--~~--~~i~d~~s~ng~-~vNg~~l~~--~~~L~~Gd~I~ 87 (98)
T d2affa1 15 GPHFPLSLSTCLFGRGIECDIRIQLPVVSKQHCKIEIHE--QE--AILHNFSSTNPT-QVNGSVIDE--PVRLKHGDVIT 87 (98)
T ss_dssp EEEEECCSSEEEEESSTTSSEEECCTTSCSSBEEEEECS--SC--EEEEECCSSSCC-EETTEECSS--CEEECTTCEEE
T ss_pred ceEEEECCCCEEEeeCCCCCEEeCCCCcCceeEEEEEeC--CE--EEEEECCCcccc-eECCEECCC--ceECCCCCEEE
Confidence 346778889999999999999999999999999999763 33 889998764 66 899999965 48999999999
Q ss_pred EccCCCeeEEeee
Q 001031 223 FSPSGKHSYIFQQ 235 (1183)
Q Consensus 223 f~~~~~~ayifq~ 235 (1183)
|+ ++.|.|++
T Consensus 88 iG---~~~~~fe~ 97 (98)
T d2affa1 88 II---DRSFRYEN 97 (98)
T ss_dssp ET---TEEEEEEE
T ss_pred EC---CEEEEEEe
Confidence 95 77888874
No 42
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.01 E-value=3.5e-10 Score=108.23 Aligned_cols=76 Identities=24% Similarity=0.350 Sum_probs=64.6
Q ss_pred cceeEEccC-CccceeecCCCCCccceEEEEeecCCcceEEEEEe-cCCceEEEcCeecCCCceEEeeCCCEEEEccCCC
Q 001031 151 GAVFTVGHN-RQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGK 228 (1183)
Q Consensus 151 ~~~~t~G~~-~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~ 228 (1183)
+..|+|||+ ..||+.|+|+.+|..||+|... ++. .+|+|. |.||| ||||+++..++.++|++||+|.|+..
T Consensus 32 ~~~~~iGR~~~~~di~l~d~~VSr~Ha~i~~~--~~~--~~i~Dl~S~nGT-~vng~~l~~~~~~~L~~Gd~i~lG~~-- 104 (118)
T d1uhta_ 32 GSTIRVGRIVRGNEIAIKDAGISTKHLRIESD--SGN--WVIQDLGSSNGT-LLNSNALDPETSVNLGDGDVIKLGEY-- 104 (118)
T ss_dssp TCCEEEESSSTTCSEECCSSSSCTTCEEEEEC--SSS--EEEECCCCSSCC-EESSSBCCTTCEEECCTTEEEEETTT--
T ss_pred CCEEEECCCCcCCeEEeCccCcchheeEEEEE--CCE--EEEEECCCccee-EECCEEcCCCcEEECCCCCEEEECCE--
Confidence 467999997 5899999999999999999875 333 889996 78999 69999999999999999999999643
Q ss_pred eeEEee
Q 001031 229 HSYIFQ 234 (1183)
Q Consensus 229 ~ayifq 234 (1183)
.++|-
T Consensus 105 -~~~~v 109 (118)
T d1uhta_ 105 -TSILV 109 (118)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 44554
No 43
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.92 E-value=8.4e-10 Score=106.03 Aligned_cols=73 Identities=21% Similarity=0.169 Sum_probs=62.6
Q ss_pred eeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEe-cCCceEEEcCeecCC--------CceEEeeCCCEEEE
Q 001031 153 VFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEIT-GGKGEVEVNGNVHPK--------DSQVVLRGGDELVF 223 (1183)
Q Consensus 153 ~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~-~~~G~v~vNg~~~~k--------~~~~~L~~gDev~f 223 (1183)
.|+|||+..||+.|+|+.+|..||+|......+. .+++|. |+||| +|||+++.+ +..+.|+.||+|.|
T Consensus 31 ~~~IGR~~~~di~l~d~~vSr~Ha~i~~~~~~~~--~~v~DlgS~nGT-~vNg~~i~~~~~~~~~~g~~~~L~~gd~i~i 107 (122)
T d1mzka_ 31 PVKLGRVSPSDLALKDSEVSGKHAQITWNSTKFK--WELVDMGSLNGT-LVNSHSISHPDLGSRKWGNPVELASDDIITL 107 (122)
T ss_dssp SEEEESSSSCSEECCCTTSSSEEEEEEEETTTTE--EEEEETTCSSCC-EETTEESSCCCTTTCCCCCCEECCTTEEEEC
T ss_pred CEEecCCCCCCEEECCCCcCccceEEEEeCCCCE--EEEeeCCCCCce-EECCEECcccccccccCCceEEcCCCCEEEE
Confidence 4899999999999999999999999997644444 778888 57999 799999965 45689999999999
Q ss_pred ccCCC
Q 001031 224 SPSGK 228 (1183)
Q Consensus 224 ~~~~~ 228 (1183)
+...+
T Consensus 108 G~~~~ 112 (122)
T d1mzka_ 108 GTTTK 112 (122)
T ss_dssp SSSCE
T ss_pred CCeEE
Confidence 88755
No 44
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=98.91 E-value=2.3e-09 Score=114.55 Aligned_cols=197 Identities=19% Similarity=0.205 Sum_probs=110.0
Q ss_pred ccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCcccccc---
Q 001031 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSKW--- 1024 (1183)
Q Consensus 951 I~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s~~--- 1024 (1183)
++|....++.+.+.+... ......|||+|++||||+++|++|.... ..+++.++|..+....
T Consensus 2 ~v~~S~~~~~~~~~~~~~------------a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~ 69 (247)
T d1ny5a2 2 YVFESPKMKEILEKIKKI------------SCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEA 69 (247)
T ss_dssp CCCCSHHHHHHHHHHHHH------------TTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHH
T ss_pred eEecCHHHHHHHHHHHHH------------hCCCCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHH
Confidence 466666777766655421 1122469999999999999999998776 5678999987653321
Q ss_pred --ccch-------HHHHHHHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHH-HhhcCCcccCCCCEEEEE
Q 001031 1025 --FGEG-------EKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFM-VNWDGLRTKDKERVLVLA 1094 (1183)
Q Consensus 1025 --~Ges-------E~~Ir~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL-~~Ldgl~~k~~~~VlVIa 1094 (1183)
+|.. ......+|..| ..+.|||||||.| +...+..+..++..-. ..+.+- .....++.+|+
T Consensus 70 ~lfg~~~~~~~~~~~~~~g~l~~a---~gGtL~l~~i~~L-----~~~~Q~~L~~~l~~~~~~~~~~~-~~~~~~~RlI~ 140 (247)
T d1ny5a2 70 ELFGYEKGAFTGAVSSKEGFFELA---DGGTLFLDEIGEL-----SLEAQAKLLRVIESGKFYRLGGR-KEIEVNVRILA 140 (247)
T ss_dssp HHHCBCTTSSTTCCSCBCCHHHHT---TTSEEEEESGGGC-----CHHHHHHHHHHHHHSEECCBTCC-SBEECCCEEEE
T ss_pred HhcCcccCCcCCcccccCCHHHcc---CCCEEEEeChHhC-----CHHHHHHHHHHHHhCCEEECCCC-CceecCeEEEE
Confidence 1110 00011233333 3479999999988 2222222222111100 011111 11124577888
Q ss_pred ecCCC-------CCCcHHHHhccCcEEEecCCCHHHHH----HHHHHHHhh----ccC----CChhhHHHHHHHcCCCcH
Q 001031 1095 ATNRP-------FDLDEAVVRRLPRRLMVNLPDAPNRE----KIIRVILAK----EEL----ASDVDLEGIANMADGYSG 1155 (1183)
Q Consensus 1095 TTN~p-------~~Ld~aLlrRFd~vI~I~lPd~eeR~----eILk~iL~k----~~l----~~didl~~LA~~TeGySg 1155 (1183)
+|+.+ ..+.+.++.|+. .+.|.+|...+|. .|++.++.+ ... .+...+..|..+.=--..
T Consensus 141 ~s~~~l~~l~~~~~f~~~L~~~l~-~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl 219 (247)
T d1ny5a2 141 ATNRNIKELVKEGKFREDLYYRLG-VIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNV 219 (247)
T ss_dssp EESSCHHHHHHTTSSCHHHHHHHT-TEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHH
T ss_pred ecCCCHHHHHHcCCCcHHHHhhcC-eeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhCCCCCHH
Confidence 88753 356777888873 4667788876664 344555543 211 123334444433211123
Q ss_pred HHHHHHHHHHHHHh
Q 001031 1156 SDLKNLCVTAAHCP 1169 (1183)
Q Consensus 1156 ~DL~~L~~~Aa~~A 1169 (1183)
++|+++++.|+..+
T Consensus 220 ~EL~~~l~~a~~~~ 233 (247)
T d1ny5a2 220 RELKNVIERAVLFS 233 (247)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 68888888887654
No 45
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.82 E-value=6.9e-09 Score=96.35 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=64.6
Q ss_pred eecceeEEccCCccceeecCCCCCccceEEEEeecCCcceEEEEEecC-CceEEEcCeecCCCceEEeeCCCEEEEccCC
Q 001031 149 MTGAVFTVGHNRQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGG-KGEVEVNGNVHPKDSQVVLRGGDELVFSPSG 227 (1183)
Q Consensus 149 i~~~~~t~G~~~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~-~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~ 227 (1183)
+....++||| ..||+.|.++.+|..||.|.....+.....++++.++ +|| +|||++|.. ++.|+.||+|.|+.
T Consensus 21 l~~~~~~iGr-~~~dI~l~~~~vs~~Ha~i~~~~~~~~~~~~i~d~~s~~gt-~VNg~~i~~--~~~L~~gD~I~~G~-- 94 (102)
T d2g1la1 21 IKDGVTRVGQ-VDMDIKLTGQFIREQHCLFRSIPQPDGEVVVTLEPCEGAET-YVNGKLVTE--PLVLKSGNRIVMGK-- 94 (102)
T ss_dssp CCSEEEEEES-SSCSEECCCTTCCSEEEEEEEEECTTSCEEEEEEECTTCCE-EETTEECCS--CEECCTTCEEEETT--
T ss_pred cCCCcEECCC-CCcCEEecccceeeeeeEEEEEEcCCCcEEEEecCCCCCCe-EECCeEccc--eeEcCCCCEEEECC--
Confidence 4578999999 6899999999999999999887655444456666554 577 799999964 69999999999974
Q ss_pred CeeEEee
Q 001031 228 KHSYIFQ 234 (1183)
Q Consensus 228 ~~ayifq 234 (1183)
.+.|.|.
T Consensus 95 ~~~frf~ 101 (102)
T d2g1la1 95 NHVFRFN 101 (102)
T ss_dssp TEEEEEE
T ss_pred CEEEEEc
Confidence 4567775
No 46
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=98.74 E-value=2.4e-08 Score=103.10 Aligned_cols=116 Identities=16% Similarity=0.233 Sum_probs=83.7
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhC------CcEEEEecCccccccccchHHHHHHHHHHHhcc----CCeEEEEeCCc
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAG------ANFINISMSSITSKWFGEGEKYVKAVFSLASKI----APSVVFVDEVD 1053 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg------~pfi~I~~s~L~s~~~GesE~~Ir~lF~~A~k~----~PsILfIDEID 1053 (1183)
+.++||+||||+|||++|..+++... ..++.+.... ... .-..++.+...+... ..-|++|||+|
T Consensus 15 ~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I--~Id~IR~i~~~~~~~~~~~~~KviIId~ad 89 (198)
T d2gnoa2 15 GISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENI--GIDDIRTIKDFLNYSPELYTRKYVIVHDCE 89 (198)
T ss_dssp SEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCB--CHHHHHHHHHHHTSCCSSSSSEEEEETTGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc---CCC--CHHHHHHHHHHHhhCcccCCCEEEEEeCcc
Confidence 46899999999999999999998772 2467766431 111 234567776666543 33599999999
Q ss_pred ccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCH
Q 001031 1054 SMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDA 1121 (1183)
Q Consensus 1054 ~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~ 1121 (1183)
.| + ....+.|+..++. ++.++++|.+|+.++.|.+++++|+ ..+.++.|..
T Consensus 90 ~l-----~-------~~aqNaLLK~LEE----Pp~~t~fiLit~~~~~ll~TI~SRC-~~i~~~~p~~ 140 (198)
T d2gnoa2 90 RM-----T-------QQAANAFLKALEE----PPEYAVIVLNTRRWHYLLPTIKSRV-FRVVVNVPKE 140 (198)
T ss_dssp GB-----C-------HHHHHHTHHHHHS----CCTTEEEEEEESCGGGSCHHHHTTS-EEEECCCCHH
T ss_pred cc-----c-------hhhhhHHHHHHhC----CCCCceeeeccCChhhCHHHHhcce-EEEeCCCchH
Confidence 98 2 2233455555543 3467899999999999999999999 7788877753
No 47
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=98.70 E-value=1.9e-09 Score=115.00 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=30.9
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
+.|||.|||| ....+||||||++.+++++-+++++
T Consensus 41 ~~vLL~GppG--tGKT~la~alA~~~~~~~~~i~~~~ 75 (246)
T d1d2na_ 41 VSVLLEGPPH--SGKTALAAKIAEESNFPFIKICSPD 75 (246)
T ss_dssp EEEEEECSTT--SSHHHHHHHHHHHHTCSEEEEECGG
T ss_pred eEEEEECcCC--CCHHHHHHHHhhccccccccccccc
Confidence 5799999999 6799999999999999988877543
No 48
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=98.68 E-value=9e-10 Score=116.02 Aligned_cols=67 Identities=31% Similarity=0.417 Sum_probs=50.6
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCcccc
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITS 1022 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s 1022 (1183)
++|+|..+.+...+.+.++... ..-...|++|||+||||||||+||++||.+++.+|+.++++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~ 70 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQG----------KKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQ 70 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTT----------CCCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHT
T ss_pred cccChHHHHHHHHHHHHHHHhc----------ccCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHH
Confidence 4566666666666666655432 111345689999999999999999999999999999999877654
No 49
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.59 E-value=2.6e-06 Score=88.25 Aligned_cols=187 Identities=13% Similarity=0.089 Sum_probs=112.7
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccc
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWF 1025 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~ 1025 (1183)
..-+++.|.++..+.|.+. ..+.++|+||+|+|||+|++.+++.++..+..+++........
T Consensus 9 ~~~~~f~GR~~el~~l~~~------------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~ 70 (283)
T d2fnaa2 9 DNRKDFFDREKEIEKLKGL------------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNY 70 (283)
T ss_dssp CSGGGSCCCHHHHHHHHHT------------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSC
T ss_pred CChhhCCChHHHHHHHHhc------------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEecccccccc
Confidence 3457899999888877541 1257999999999999999999999999888887644322110
Q ss_pred cch----------------------------------------------HHHHHHHHHHH--hccCCeEEEEeCCccccc
Q 001031 1026 GEG----------------------------------------------EKYVKAVFSLA--SKIAPSVVFVDEVDSMLG 1057 (1183)
Q Consensus 1026 Ges----------------------------------------------E~~Ir~lF~~A--~k~~PsILfIDEID~Ll~ 1057 (1183)
... ...+..++... ....+.+|++||++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~ 150 (283)
T d2fnaa2 71 ISYKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVK 150 (283)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGG
T ss_pred ccHHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcc
Confidence 000 00112222222 223567899999998854
Q ss_pred CCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCC---------CCcHHHHhccCcEEEecCCCHHHHHHHH
Q 001031 1058 RRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPF---------DLDEAVVRRLPRRLMVNLPDAPNREKII 1128 (1183)
Q Consensus 1058 ~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~---------~Ld~aLlrRFd~vI~I~lPd~eeR~eIL 1128 (1183)
.... ... ..+..+... ..++..+.+..... .....+..|+...+.++..+.++..+++
T Consensus 151 ~~~~-~~~----~~l~~~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l 217 (283)
T d2fnaa2 151 LRGV-NLL----PALAYAYDN--------LKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFL 217 (283)
T ss_dssp CTTC-CCH----HHHHHHHHH--------CTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHH
T ss_pred cchH-HHH----HHHHHHHHh--------hhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHH
Confidence 3221 111 111222111 12344444432211 1111223344567889999999999999
Q ss_pred HHHHhhccCCChhhHHHHHHHcCCCcHHHHHHHHHHH
Q 001031 1129 RVILAKEELASDVDLEGIANMADGYSGSDLKNLCVTA 1165 (1183)
Q Consensus 1129 k~iL~k~~l~~didl~~LA~~TeGySg~DL~~L~~~A 1165 (1183)
...+....+..+ +++.+.+.+.|. +..|..++..+
T Consensus 218 ~~~~~~~~~~~~-~~~~i~~~~~G~-P~~L~~~~~~~ 252 (283)
T d2fnaa2 218 RRGFQEADIDFK-DYEVVYEKIGGI-PGWLTYFGFIY 252 (283)
T ss_dssp HHHHHHHTCCCC-CHHHHHHHHCSC-HHHHHHHHHHH
T ss_pred HhhhhhcCCCHH-HHHHHHHHhCCC-HHHHHHHHHHH
Confidence 988877655433 467888888886 55676666544
No 50
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=98.58 E-value=4.5e-09 Score=116.21 Aligned_cols=90 Identities=11% Similarity=0.142 Sum_probs=63.0
Q ss_pred HHHHHHHHhhccCCCCEEEEEcChhhhhcC---------ChhhHHHHHHHHhcC--CCCEEEEEeccCCCcccccCCCCC
Q 001031 690 INELFEVALNESKSSPLIVFVKDIEKSLTG---------NNDAYGALKSKLENL--PSNVVVIGSHTQLDSRKEKSHPGG 758 (1183)
Q Consensus 690 ~~~l~evl~s~~~~~P~Ilf~~Die~~l~~---------~~~~~~~i~~~L~~L--~g~vivIgs~~~~d~~k~k~~~~~ 758 (1183)
+..||+-+. +|.||||||||.+... ..+..+-+-..++.+ ..+|+||||||+.+
T Consensus 173 ~~~~f~~a~-----~~~ilf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~---------- 237 (321)
T d1w44a_ 173 VDDIARAML-----QHRVIVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNPTS---------- 237 (321)
T ss_dssp HHHHHHHHH-----HCSEEEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCC----------
T ss_pred HHHHHHHHh-----hccEEEeehhhhhccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCCcc----------
Confidence 566666653 3679999999997651 234444444445544 34899999999321
Q ss_pred ceeeccCcchhhhccccCCCCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH--HHHHHHhhhhhhhhhccch
Q 001031 759 LLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS--DWKQQLERDVETLKGQSNI 836 (1183)
Q Consensus 759 ~~~~~~~~~~~~~~d~~~PD~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR--Rferq~e~~Lpd~~gR~~I 836 (1183)
.||.++ ++++| ||+++++.+.||..+|.+|
T Consensus 238 -----------------~~~~i~-------------------------------~~~~r~~Rf~~~v~v~~pd~~~r~~i 269 (321)
T d1w44a_ 238 -----------------NDDKIV-------------------------------ELVKEASRSNSTSLVISTDVDGEWQV 269 (321)
T ss_dssp -----------------CCHHHH-------------------------------HHHHHHHHHSCSEEEEECSSTTEEEE
T ss_pred -----------------cccchh-------------------------------hhhhccCcccceeecCCCChHHHHHH
Confidence 122333 37778 9999999999999999999
Q ss_pred hHHHHH
Q 001031 837 ISIRSV 842 (1183)
Q Consensus 837 l~IHT~ 842 (1183)
++.|+.
T Consensus 270 l~~~~~ 275 (321)
T d1w44a_ 270 LTRTGE 275 (321)
T ss_dssp EEECBT
T ss_pred HHHhcc
Confidence 999964
No 51
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.54 E-value=9.2e-08 Score=89.57 Aligned_cols=79 Identities=22% Similarity=0.361 Sum_probs=63.9
Q ss_pred eeecceeEEccC--CccceeecCCCCCccceEEEEeecCCcceEEEEEecC-CceEEEcCeecCCCceEEeeCCCEEEEc
Q 001031 148 SMTGAVFTVGHN--RQCDLYLKDPSISKNLCRLRRIENGGPSGALLEITGG-KGEVEVNGNVHPKDSQVVLRGGDELVFS 224 (1183)
Q Consensus 148 ~i~~~~~t~G~~--~~cd~~l~d~~~s~~~c~l~~~~~~g~~~a~le~~~~-~G~v~vNg~~~~k~~~~~L~~gDev~f~ 224 (1183)
.|.....+||++ ..||+.|.++.+|..||.|.... +. .+|++.++ ||| +|||++|.+ .+.|++||+|.|+
T Consensus 25 ~l~~~~~~iG~~rs~~~dI~L~~~~Vs~~Ha~i~~~~--~~--~~l~d~~s~~gt-~vng~~v~~--~~~L~~gd~i~iG 97 (107)
T d1wlna1 25 RLQLSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMD--GV--VTVTPRSMDAET-YVDGQRISE--TTMLQSGMRLQFG 97 (107)
T ss_dssp ECCSEEEECSSSCCSTTCCCCCCTTCCSSCEEEEESS--SC--EEEEESCSSSCE-EETSCBCSS--CEEECTTCEEEET
T ss_pred EECCCCEEECCCCCCCCcEEECCcceeeeEEEEEEcc--cc--cEEecCCCCcce-EEccccccc--eeECCCCCEEEEC
Confidence 455789999975 57999999999999999999753 33 67788755 576 899999975 6789999999998
Q ss_pred cCCCeeEEeee
Q 001031 225 PSGKHSYIFQQ 235 (1183)
Q Consensus 225 ~~~~~ayifq~ 235 (1183)
. .|-|.|.+
T Consensus 98 ~--~~~Frf~~ 106 (107)
T d1wlna1 98 T--SHVFKFVD 106 (107)
T ss_dssp T--TEEEEEEC
T ss_pred C--ceEEEEeC
Confidence 4 36777764
No 52
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=98.42 E-value=2.3e-08 Score=109.69 Aligned_cols=66 Identities=20% Similarity=0.218 Sum_probs=53.2
Q ss_pred hhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCCC
Q 001031 462 DITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1183)
Q Consensus 462 e~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1183)
++.|.+|..|.|-|++...+..-.+.-.+ -+-|||.|||| ....+||||||+.++.++..+|.+.+
T Consensus 20 d~A~~~l~~av~~~~~r~~~~~~~~~~~~-~~~iLl~GPpG--~GKT~lAkalA~~~~~~~~~i~~s~~ 85 (309)
T d1ofha_ 20 ADAKRAVAIALRNRWRRMQLQEPLRHEVT-PKNILMIGPTG--VGKTEIARRLAKLANAPFIKVEATKF 85 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCHHHHHHCC-CCCEEEECCTT--SSHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCccCCC-CceEEEECCCC--CCHHHHHHHHhhccccchhccccccc
Confidence 78999999999999887765422221112 27899999999 79999999999999999999998765
No 53
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=97.88 E-value=1.3e-05 Score=78.52 Aligned_cols=26 Identities=38% Similarity=0.692 Sum_probs=23.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCc
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGAN 1011 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~p 1011 (1183)
.|+|.||+|+|||||+++|+..++.+
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~ 27 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKR 27 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCC
Confidence 58999999999999999999988543
No 54
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=97.48 E-value=3e-05 Score=73.40 Aligned_cols=32 Identities=28% Similarity=0.638 Sum_probs=28.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~ 1016 (1183)
+.|+|.||||+||||+|++||..++++|+..+
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 46999999999999999999999999997543
No 55
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=97.45 E-value=3.5e-05 Score=74.53 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=31.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~ 1019 (1183)
+.|+|.|||||||||||++||+.++.+++......
T Consensus 8 K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~ 42 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGRE 42 (192)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHH
Confidence 67999999999999999999999999998765544
No 56
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=97.44 E-value=0.00067 Score=72.20 Aligned_cols=186 Identities=16% Similarity=0.121 Sum_probs=99.7
Q ss_pred HHHhcCCCCCCCCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh---
Q 001031 932 KKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA--- 1008 (1183)
Q Consensus 932 k~ll~~iIp~~e~~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL--- 1008 (1183)
+.++.+-+|... ++.|.+...+.|.+.+.. . . .....-|.|+|..|+|||+||+.+++..
T Consensus 9 ~~l~~~~~p~~~------~~~gR~~~~~~i~~~L~~-~--------~--~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~ 71 (277)
T d2a5yb3 9 RKLLLGNVPKQM------TCYIREYHVDRVIKKLDE-M--------C--DLDSFFLFLHGRAGSGKSVIASQALSKSDQL 71 (277)
T ss_dssp HHHHHTTCBCCC------CSCCCHHHHHHHHHHHHH-H--------T--TSSSEEEEEECSTTSSHHHHHHHHHHHCSST
T ss_pred ccccccCCCCCC------ceeCcHHHHHHHHHHHHh-c--------c--CCCceEEEEECCCCCCHHHHHHHHHHhhhhh
Confidence 334444555432 467899888888887642 0 0 1123458899999999999999998874
Q ss_pred -CCcE---EEEecCccccc------------------------cccchHHHHHH-HHHHHhccCCeEEEEeCCcccccCC
Q 001031 1009 -GANF---INISMSSITSK------------------------WFGEGEKYVKA-VFSLASKIAPSVVFVDEVDSMLGRR 1059 (1183)
Q Consensus 1009 -g~pf---i~I~~s~L~s~------------------------~~GesE~~Ir~-lF~~A~k~~PsILfIDEID~Ll~~r 1059 (1183)
+..| +.+..+..... .........+. .....-...+++|+||+++..
T Consensus 72 ~~~~f~~~~Wv~vs~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~---- 147 (277)
T d2a5yb3 72 IGINYDSIVWLKDSGTAPKSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE---- 147 (277)
T ss_dssp BTTTBSEEEEEECCCCSTTHHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH----
T ss_pred hhhcCceEEEEEecCCCCHHHHHHHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHH----
Confidence 2221 22332211000 00111122222 222333456799999998632
Q ss_pred CCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcEEEecCCCHHHHHHHHHHHHhhccCCC
Q 001031 1060 ENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVILAKEELAS 1139 (1183)
Q Consensus 1060 ~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI~I~lPd~eeR~eILk~iL~k~~l~~ 1139 (1183)
...+ .+. . ....+|.||.....+. .+..+. ..+.++..+.++-.++|..+........
T Consensus 148 ------~~~~----~~~----~------~~srilvTTR~~~v~~-~~~~~~-~~~~l~~L~~~ea~~Lf~~~~~~~~~~~ 205 (277)
T d2a5yb3 148 ------ETIR----WAQ----E------LRLRCLVTTRDVEISN-AASQTC-EFIEVTSLEIDECYDFLEAYGMPMPVGE 205 (277)
T ss_dssp ------HHHH----HHH----H------TTCEEEEEESBGGGGG-GCCSCE-EEEECCCCCHHHHHHHHHHTSCCCC--C
T ss_pred ------hhhh----hhc----c------cCceEEEEeehHHHHH-hcCCCC-ceEECCCCCHHHHHHHHHHHhCCccCch
Confidence 1111 111 0 1235677776543222 111121 3577888999998888876543322221
Q ss_pred --hhhHHHHHHHcCCCcHHHHHHH
Q 001031 1140 --DVDLEGIANMADGYSGSDLKNL 1161 (1183)
Q Consensus 1140 --didl~~LA~~TeGySg~DL~~L 1161 (1183)
.....+|++.+.|. +-.|..+
T Consensus 206 ~~~~~~~~iv~~c~Gl-PLAl~~i 228 (277)
T d2a5yb3 206 KEEDVLNKTIELSSGN-PATLMMF 228 (277)
T ss_dssp HHHHHHHHHHHHHTTC-HHHHHHH
T ss_pred hhHHHHHHHHHHhCCC-HHHHHHH
Confidence 11246788888775 5566554
No 57
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=97.38 E-value=0.00021 Score=73.39 Aligned_cols=64 Identities=20% Similarity=0.305 Sum_probs=48.8
Q ss_pred ccccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
+||++ .-.|+.+.-|....-.+.+..+. -+-+||+|||| ....+|||+||++++....++..+.
T Consensus 7 ~~~di--vGqe~~~~~l~~~i~~~~~~~~~----------~~~~L~~GPpG--tGKT~lA~~la~~~~~~~~~~~~~~ 70 (238)
T d1in4a2 7 SLDEF--IGQENVKKKLSLALEAAKMRGEV----------LDHVLLAGPPG--LGKTTLAHIIASELQTNIHVTSGPV 70 (238)
T ss_dssp SGGGC--CSCHHHHHHHHHHHHHHHHHTCC----------CCCEEEESSTT--SSHHHHHHHHHHHHTCCEEEEETTT
T ss_pred cHHHc--CChHHHHHHHHHHHHHHHhcCCC----------CCeEEEECCCC--CcHHHHHHHHHhccCCCcccccCcc
Confidence 67774 67899999888776544433222 13599999999 7899999999999999988876533
No 58
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.26 E-value=7.8e-05 Score=71.78 Aligned_cols=31 Identities=48% Similarity=0.861 Sum_probs=28.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
..|+|.||||+||||+|++||+.++++++.+
T Consensus 5 ~~I~i~G~pGsGKTTia~~La~~l~~~~i~~ 35 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTLGKELASKSGLKYINV 35 (173)
T ss_dssp CCEEEECSTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCcEEec
Confidence 3699999999999999999999999998754
No 59
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.11 E-value=8.6e-05 Score=71.84 Aligned_cols=35 Identities=31% Similarity=0.519 Sum_probs=31.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~ 1019 (1183)
+-|+|.||||+|||++|+++++.++.+++.++...
T Consensus 5 ~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~ 39 (176)
T d1zp6a1 5 NILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDD 39 (176)
T ss_dssp EEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHH
Confidence 34899999999999999999999999999998654
No 60
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.08 E-value=0.00011 Score=71.97 Aligned_cols=31 Identities=32% Similarity=0.571 Sum_probs=28.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~ 1016 (1183)
+|+|.|+||+|||++++.+|+.+|++|+..+
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 5899999999999999999999999999654
No 61
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=96.99 E-value=0.00015 Score=71.14 Aligned_cols=31 Identities=26% Similarity=0.565 Sum_probs=28.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
+.|+|.|+||+||||+|+.+|+.+|++|+..
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 3588999999999999999999999998864
No 62
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.98 E-value=0.00071 Score=69.65 Aligned_cols=76 Identities=16% Similarity=0.045 Sum_probs=52.1
Q ss_pred ccccccccchhhHHHHHHhhhhhhcccccc-ccccCCC-CCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 452 SFESFPYYLSDITKNVLIASTYVHLKCNNF-AKYASDL-PTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hLk~~~~-~k~~~~l-~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
+|+++-.. ++.+.-|.+..-.+...... .++.... ....+-+||+||+| ....++|+|||++++..+..++.+.
T Consensus 12 ~~~dlig~--~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG--~GKTt~a~~la~~~~~~~~~~~~~~ 87 (253)
T d1sxja2 12 NLQQVCGN--KGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPG--IGKTTAAHLVAQELGYDILEQNASD 87 (253)
T ss_dssp SGGGCCSC--HHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTT--SSHHHHHHHHHHHTTCEEEEECTTS
T ss_pred CHHHhcCC--HHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCC--CCHHHHHHHHHHHHHhhhhcccccc
Confidence 57777765 77777776654322222111 1233333 44557899999999 7899999999999999999888765
Q ss_pred CC
Q 001031 530 LP 531 (1183)
Q Consensus 530 ~~ 531 (1183)
..
T Consensus 88 ~~ 89 (253)
T d1sxja2 88 VR 89 (253)
T ss_dssp CC
T ss_pred ch
Confidence 44
No 63
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=96.97 E-value=0.00025 Score=68.20 Aligned_cols=33 Identities=15% Similarity=0.343 Sum_probs=29.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~ 1017 (1183)
+-|+|+|+||+|||++|++|++.++.+++.++.
T Consensus 4 kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 4 RMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCeEEeec
Confidence 458999999999999999999999999888764
No 64
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.94 E-value=0.00017 Score=70.36 Aligned_cols=31 Identities=26% Similarity=0.615 Sum_probs=28.0
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~ 1016 (1183)
.|+|.|+||+|||++++.+|+.++.+|+..+
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 5778899999999999999999999998654
No 65
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.89 E-value=0.00033 Score=67.38 Aligned_cols=24 Identities=38% Similarity=0.690 Sum_probs=22.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
++|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 579999999999999999999887
No 66
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=96.85 E-value=0.00028 Score=67.37 Aligned_cols=28 Identities=25% Similarity=0.417 Sum_probs=25.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi 1013 (1183)
-|+|.||||+||||+|+.||+.++..++
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 4899999999999999999999987655
No 67
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=96.83 E-value=0.00032 Score=67.63 Aligned_cols=32 Identities=31% Similarity=0.477 Sum_probs=28.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINIS 1016 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~ 1016 (1183)
+=++|.||||+|||++|++|++.++++++..+
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeechh
Confidence 45889999999999999999999998887644
No 68
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=96.75 E-value=0.0047 Score=62.78 Aligned_cols=74 Identities=20% Similarity=0.220 Sum_probs=50.8
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCccccc----------------------------cccchHHHH
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------------------WFGEGEKYV 1032 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s~----------------------------~~GesE~~I 1032 (1183)
..-++|+|+||+|||+|+..+|... +..++.++..+-... ........+
T Consensus 26 gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (242)
T d1tf7a2 26 DSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGLEDHL 105 (242)
T ss_dssp SCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhHHHHH
Confidence 3558999999999999999998876 556666654320000 001123345
Q ss_pred HHHHHHHhccCCeEEEEeCCccccc
Q 001031 1033 KAVFSLASKIAPSVVFVDEVDSMLG 1057 (1183)
Q Consensus 1033 r~lF~~A~k~~PsILfIDEID~Ll~ 1057 (1183)
..+........+.+++||.++.++.
T Consensus 106 ~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 106 QIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp HHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred HHHHHHHHhcCCceeeeecchhhhc
Confidence 5566666778899999999998863
No 69
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=96.73 E-value=0.00051 Score=66.18 Aligned_cols=27 Identities=44% Similarity=0.667 Sum_probs=24.4
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCC
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGA 1010 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~ 1010 (1183)
+..|+|.||||+||||+|+.||..++.
T Consensus 5 ~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 5 GINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp SCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 356999999999999999999999864
No 70
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=96.71 E-value=0.00036 Score=69.39 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=28.4
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
|..|+|.||||+||||+|+.||..+|++++.+
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~~~is~ 34 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQLAHISA 34 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCCEECCH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCCcEEeh
Confidence 35799999999999999999999999987643
No 71
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.69 E-value=0.00053 Score=67.00 Aligned_cols=30 Identities=30% Similarity=0.557 Sum_probs=27.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
.|+|.||||+||||+|+.||+.+|++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i~~ 31 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceech
Confidence 589999999999999999999999987764
No 72
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=96.65 E-value=0.0025 Score=71.37 Aligned_cols=96 Identities=20% Similarity=0.275 Sum_probs=66.1
Q ss_pred CCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhC---CcEEEEecC-
Q 001031 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAG---ANFINISMS- 1018 (1183)
Q Consensus 943 e~~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg---~pfi~I~~s- 1018 (1183)
....++++++-.....+.+++++.. +..-|||.||+|+|||++..++..+++ .+++.+--+
T Consensus 132 ~~~~~l~~LG~~~~~~~~l~~l~~~---------------~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPi 196 (401)
T d1p9ra_ 132 ATRLDLHSLGMTAHNHDNFRRLIKR---------------PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPI 196 (401)
T ss_dssp TTCCCGGGSCCCHHHHHHHHHHHTS---------------SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSC
T ss_pred ccchhhhhhcccHHHHHHHHHHHhh---------------hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCc
Confidence 3346788999888888888876642 323489999999999999999988873 456665422
Q ss_pred ccccc------cccchHHHHHHHHHHHhccCCeEEEEeCCc
Q 001031 1019 SITSK------WFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1183)
Q Consensus 1019 ~L~s~------~~GesE~~Ir~lF~~A~k~~PsILfIDEID 1053 (1183)
+..-. ..+........+...+.+..|.||+|.||.
T Consensus 197 E~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiR 237 (401)
T d1p9ra_ 197 EFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIR 237 (401)
T ss_dssp CSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCC
T ss_pred ccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcC
Confidence 21110 011112234556677788999999999996
No 73
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=96.62 E-value=0.00067 Score=67.30 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=27.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
..|+|.||||+||||+|+.||..+|++++.+
T Consensus 4 ~riil~G~pGSGKsT~a~~La~~~g~~~i~~ 34 (190)
T d1ak2a1 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLAT 34 (190)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeH
Confidence 4688899999999999999999999877654
No 74
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.60 E-value=0.0068 Score=62.25 Aligned_cols=135 Identities=14% Similarity=0.147 Sum_probs=72.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCccccc--------------------cccchHHHHHHHHHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK--------------------WFGEGEKYVKAVFSLA 1039 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s~--------------------~~GesE~~Ir~lF~~A 1039 (1183)
.|.-|+|.||+|+|||+.+..+|..+ +..+..+.+..+... ...+....+......+
T Consensus 8 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~a 87 (211)
T d2qy9a2 8 APFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAA 87 (211)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHHH
Confidence 34568999999999999887788665 566655555442110 1112234455555556
Q ss_pred hccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCccc-CCCCEEEEEecCCCCCCcHHHHh--ccC-cEEE
Q 001031 1040 SKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTK-DKERVLVLAATNRPFDLDEAVVR--RLP-RRLM 1115 (1183)
Q Consensus 1040 ~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k-~~~~VlVIaTTN~p~~Ld~aLlr--RFd-~vI~ 1115 (1183)
+...-.+||||=..+. +.....+. -+..+...+...... +...++|+-++...+.+...... .++ ..+.
T Consensus 88 ~~~~~d~ilIDTaGr~------~~d~~~~~-el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI 160 (211)
T d2qy9a2 88 KARNIDVLIADTAGRL------QNKSHLME-ELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGIT 160 (211)
T ss_dssp HHTTCSEEEECCCCCG------GGHHHHHH-HHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCCCEEE
T ss_pred HHcCCCEEEeccCCCc------cccHHHHH-HHHHHHHHHhhhcccCcceeeeehhcccCcchHHHHhhhhhccCCceEE
Confidence 6556679999987654 12222222 222333333332221 23556677666665555543322 111 2344
Q ss_pred ecCCCHHHH
Q 001031 1116 VNLPDAPNR 1124 (1183)
Q Consensus 1116 I~lPd~eeR 1124 (1183)
+.-.|...|
T Consensus 161 lTKlDe~~~ 169 (211)
T d2qy9a2 161 LTKLDGTAK 169 (211)
T ss_dssp EECCTTCTT
T ss_pred EeecCCCCC
Confidence 555555444
No 75
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=96.54 E-value=0.00071 Score=67.20 Aligned_cols=30 Identities=20% Similarity=0.459 Sum_probs=27.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
.-|+|.||||+||||+|+.||..+|+.++.
T Consensus 7 ~iI~i~G~pGSGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 7 NVVFVLGGPGSGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHCCceEc
Confidence 568999999999999999999999987654
No 76
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=96.52 E-value=0.00036 Score=66.99 Aligned_cols=26 Identities=27% Similarity=0.338 Sum_probs=23.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~ 1010 (1183)
.-|+|+|+||+||||+|++||+.++.
T Consensus 7 ~~I~l~G~~GsGKTTia~~La~~L~~ 32 (183)
T d1m8pa3 7 FTIFLTGYMNSGKDAIARALQVTLNQ 32 (183)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 45899999999999999999999853
No 77
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.44 E-value=0.00093 Score=65.71 Aligned_cols=30 Identities=40% Similarity=0.651 Sum_probs=27.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
.|+|.||||+||||+|+.||+.+|+.++.+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i~~ 31 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQIST 31 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceEch
Confidence 589999999999999999999999887754
No 78
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=96.44 E-value=0.0068 Score=62.06 Aligned_cols=71 Identities=14% Similarity=0.175 Sum_probs=42.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCccccc----------------c----ccchHHHHHHHHHHHhc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------W----FGEGEKYVKAVFSLASK 1041 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s~----------------~----~GesE~~Ir~lF~~A~k 1041 (1183)
+-++|.||+|+|||+.+..+|..+ |..+..+.+...... + ..+....+......++.
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~~~ 86 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAMKA 86 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHHHHHHHHHHHH
Confidence 568999999999999877777766 555555544332110 0 01122233333333444
Q ss_pred cCCeEEEEeCCccc
Q 001031 1042 IAPSVVFVDEVDSM 1055 (1183)
Q Consensus 1042 ~~PsILfIDEID~L 1055 (1183)
..-.+||||=.-+.
T Consensus 87 ~~~d~ilIDTaGr~ 100 (207)
T d1okkd2 87 RGYDLLFVDTAGRL 100 (207)
T ss_dssp HTCSEEEECCCCCC
T ss_pred CCCCEEEcCccccc
Confidence 45579999988654
No 79
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.40 E-value=0.001 Score=65.90 Aligned_cols=30 Identities=20% Similarity=0.444 Sum_probs=26.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
.-|+|.||||+||||+|+.||+.+|+.++.
T Consensus 2 ~iI~i~GppGSGKsT~a~~La~~~g~~~i~ 31 (194)
T d1teva_ 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLS 31 (194)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCceEc
Confidence 468999999999999999999999887654
No 80
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=96.37 E-value=0.0011 Score=65.26 Aligned_cols=30 Identities=33% Similarity=0.582 Sum_probs=27.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
.|+|.||||+||||+|+.||..+|++++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is~ 31 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIST 31 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceeeH
Confidence 589999999999999999999999987764
No 81
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.36 E-value=0.00099 Score=66.35 Aligned_cols=31 Identities=19% Similarity=0.382 Sum_probs=27.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
.-|+|.||||+|||++|+.||+.+|+.++..
T Consensus 9 ~iI~i~GppGSGKsT~a~~La~~~g~~~is~ 39 (196)
T d1ukza_ 9 SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSA 39 (196)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeEEeh
Confidence 3589999999999999999999998877653
No 82
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.36 E-value=0.0014 Score=69.87 Aligned_cols=84 Identities=24% Similarity=0.364 Sum_probs=59.6
Q ss_pred HHHHHHHHhhccCCCCEEEEEcChhhhhc-C-----ChhhHHHHHHHHhcCCCCEEEEEeccCCCcccccCCCCCceeec
Q 001031 690 INELFEVALNESKSSPLIVFVKDIEKSLT-G-----NNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTK 763 (1183)
Q Consensus 690 ~~~l~evl~s~~~~~P~Ilf~~Die~~l~-~-----~~~~~~~i~~~L~~L~g~vivIgs~~~~d~~k~k~~~~~~~~~~ 763 (1183)
+..+++-+ .+.+++||||+|++.++. + +.++.+.|+..|. +|.+-|||+|+..++++
T Consensus 99 ~~~i~~~~---~~~~~iIlfiDeih~l~~~g~~~g~~~d~a~~Lkp~L~--rg~i~vIgatT~eey~~------------ 161 (268)
T d1r6bx2 99 FKALLKQL---EQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLS--SGKIRVIGSTTYQEFSN------------ 161 (268)
T ss_dssp HHHHHHHH---SSSSCEEEEETTTTTTTTSCCSSSCHHHHHHHHSSCSS--SCCCEEEEEECHHHHHC------------
T ss_pred HHHHHHHh---hccCCceEEecchHHHhcCCCCCCccccHHHHhhHHHh--CCCCeEEEeCCHHHHHH------------
Confidence 44444444 347889999999999885 1 3577888887777 89999999999433311
Q ss_pred cCcchhhhccccCCCCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH
Q 001031 764 FGSNQTALLDLAFPDNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS 817 (1183)
Q Consensus 764 ~~~~~~~~~d~~~PD~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR 817 (1183)
..+.+..|.++| ++|.|.+|..+..++
T Consensus 162 --------------------------~~e~d~al~rrF-~~I~V~Eps~e~t~~ 188 (268)
T d1r6bx2 162 --------------------------IFEKDRALARRF-QKIDITEPSIEETVQ 188 (268)
T ss_dssp --------------------------CCCCTTSSGGGE-EEEECCCCCHHHHHH
T ss_pred --------------------------HHhhcHHHHhhh-cccccCCCCHHHHHH
Confidence 001123577888 789999999888765
No 83
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=96.35 E-value=0.0014 Score=65.72 Aligned_cols=31 Identities=16% Similarity=0.377 Sum_probs=27.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
..|+|.||||+|||++|+.||..+|+.++.+
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g~~~is~ 37 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFELKHLSS 37 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBCCEEEEH
T ss_pred eeEEEECCCCCCHHHHHHHHHHHHCCeEEcH
Confidence 5689999999999999999999999877643
No 84
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=96.34 E-value=0.001 Score=66.53 Aligned_cols=29 Identities=34% Similarity=0.507 Sum_probs=26.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
=|.|.||||+||+|+|+.||+.+|++++.
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~iS 33 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHLLD 33 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 57888999999999999999999988753
No 85
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.33 E-value=0.0012 Score=65.06 Aligned_cols=31 Identities=29% Similarity=0.488 Sum_probs=27.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
..|+|.||||+|||++|+.||..+|++++..
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~~i~~ 33 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLAT 33 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCEEEEH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCceEec
Confidence 3588999999999999999999999887654
No 86
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=96.27 E-value=0.0013 Score=65.58 Aligned_cols=31 Identities=26% Similarity=0.487 Sum_probs=27.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
+-|+|.||||+|||++|+.||..+|++++..
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g~~~is~ 39 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYGYTHLST 39 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTCCEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhCCeeEec
Confidence 4689999999999999999999998877643
No 87
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=96.25 E-value=0.0053 Score=65.04 Aligned_cols=73 Identities=26% Similarity=0.322 Sum_probs=49.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCcccc------------c----cccchHHHHHHHHHHHhccCCe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS------------K----WFGEGEKYVKAVFSLASKIAPS 1045 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s------------~----~~GesE~~Ir~lF~~A~k~~Ps 1045 (1183)
.-++|+||||+|||+|+-.++... +..+++++...-+. + .....|..+..+-...+..++.
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~~~~~~ 134 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVD 134 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHHHTCCS
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 448999999999999998887655 67778887643111 0 1122344444444445567789
Q ss_pred EEEEeCCccccc
Q 001031 1046 VVFVDEVDSMLG 1057 (1183)
Q Consensus 1046 ILfIDEID~Ll~ 1057 (1183)
+|+||-|..+++
T Consensus 135 liViDSi~al~~ 146 (263)
T d1u94a1 135 VIVVDSVAALTP 146 (263)
T ss_dssp EEEEECGGGCCC
T ss_pred EEEEECcccccc
Confidence 999999988863
No 88
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.25 E-value=0.00043 Score=67.99 Aligned_cols=28 Identities=25% Similarity=0.226 Sum_probs=24.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pf 1012 (1183)
.-|+|+|+||+||||+|++||..++.++
T Consensus 20 ~vI~L~G~pGSGKTTiAk~La~~l~~~~ 47 (195)
T d1x6va3 20 CTVWLTGLSGAGKTTVSMALEEYLVCHG 47 (195)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHhcC
Confidence 4578999999999999999999985443
No 89
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.21 E-value=0.01 Score=60.94 Aligned_cols=36 Identities=28% Similarity=0.331 Sum_probs=26.2
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
+|.-|+|.||+|+|||+.+..+|..+ +..+..+.+.
T Consensus 10 ~p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~D 48 (213)
T d1vmaa2 10 PPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAAD 48 (213)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeec
Confidence 44668999999999999877777665 5555444443
No 90
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=96.19 E-value=0.0031 Score=62.32 Aligned_cols=32 Identities=25% Similarity=0.409 Sum_probs=26.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~ 1017 (1183)
=|+|+|.||+||||+|++||+.+ +.+...++.
T Consensus 4 li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~ 38 (213)
T d1bifa1 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNV 38 (213)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEcc
Confidence 48999999999999999999887 455555554
No 91
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.19 E-value=0.0015 Score=64.01 Aligned_cols=30 Identities=30% Similarity=0.441 Sum_probs=27.1
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
.|+|.||||+||||+|+.||+.+++.++..
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~~ 31 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIST 31 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceech
Confidence 588999999999999999999999887754
No 92
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.08 E-value=0.0017 Score=65.36 Aligned_cols=29 Identities=31% Similarity=0.629 Sum_probs=25.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
-|.|.||||+||||+|+.||..+|++++.
T Consensus 5 ~IaIdGp~GsGKgT~ak~La~~lg~~~is 33 (223)
T d1q3ta_ 5 QIAIDGPASSGKSTVAKIIAKDFGFTYLD 33 (223)
T ss_dssp EEEEECSSCSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEC
Confidence 35677999999999999999999998764
No 93
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.96 E-value=0.021 Score=56.74 Aligned_cols=76 Identities=17% Similarity=0.221 Sum_probs=48.1
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHH----hCCcEEEEecCccccc----------------------------------c
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATE----AGANFINISMSSITSK----------------------------------W 1024 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~e----Lg~pfi~I~~s~L~s~----------------------------------~ 1024 (1183)
+..-++|+|+||+|||+||..+|.. .+..+..++...-... .
T Consensus 25 ~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (242)
T d1tf7a1 25 IGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEGQEV 104 (242)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSCCSC
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHcCCChHHHHHhcchhhhhhccchhhhhh
Confidence 4456899999999999999776543 2556665554320000 0
Q ss_pred cc--chHHHHHHHHHHHhccCCeEEEEeCCcccccC
Q 001031 1025 FG--EGEKYVKAVFSLASKIAPSVVFVDEVDSMLGR 1058 (1183)
Q Consensus 1025 ~G--esE~~Ir~lF~~A~k~~PsILfIDEID~Ll~~ 1058 (1183)
.. .....+..+.....++.+.+++||.+..++..
T Consensus 105 ~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~ 140 (242)
T d1tf7a1 105 VGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQ 140 (242)
T ss_dssp CSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTT
T ss_pred hccccHHHHHHHHHHHHHhhccchhhhhHHHHHHHh
Confidence 00 11223455556667788999999999988643
No 94
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=95.87 E-value=0.022 Score=58.28 Aligned_cols=72 Identities=18% Similarity=0.040 Sum_probs=39.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCccccc--------------------cccchHHHHHHHHHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK--------------------WFGEGEKYVKAVFSLA 1039 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s~--------------------~~GesE~~Ir~lF~~A 1039 (1183)
.|.-|+|.||+|+|||+.+..+|..+ +..+..+.+...... ...+....+......+
T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~~ 90 (211)
T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEKF 90 (211)
T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHHHHHh
Confidence 34568999999999999877777665 555555544331110 0112223334444444
Q ss_pred hccCCeEEEEeCCcc
Q 001031 1040 SKIAPSVVFVDEVDS 1054 (1183)
Q Consensus 1040 ~k~~PsILfIDEID~ 1054 (1183)
+...-.+||||=..+
T Consensus 91 ~~~~~d~IlIDTaGr 105 (211)
T d1j8yf2 91 LSEKMEIIIVDTAGR 105 (211)
T ss_dssp HHTTCSEEEEECCCS
T ss_pred hccCCceEEEecCCc
Confidence 555567999996643
No 95
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=95.83 E-value=0.002 Score=60.70 Aligned_cols=31 Identities=35% Similarity=0.543 Sum_probs=23.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~ 1017 (1183)
=|+|+|+||+|||++|+.++.... .+..++.
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~-~~~~~~~ 34 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNP-GFYNINR 34 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHST-TEEEECH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCC-CCEEech
Confidence 488999999999999999877653 2444443
No 96
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=95.79 E-value=0.0096 Score=60.69 Aligned_cols=30 Identities=20% Similarity=0.377 Sum_probs=26.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
+.++|+|||+||||++|.+|++.++..++.
T Consensus 54 n~i~~~GP~~TGKS~f~~sl~~~l~G~vis 83 (205)
T d1tuea_ 54 NCLVFCGPANTGKSYFGMSFIHFIQGAVIS 83 (205)
T ss_dssp SEEEEESCGGGCHHHHHHHHHHHHTCEECC
T ss_pred eEEEEECCCCccHHHHHHHHHHHhCCEEEe
Confidence 569999999999999999999999765543
No 97
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=95.77 E-value=0.0048 Score=63.04 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=51.9
Q ss_pred ccccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
|||+| +-.|++|..|-.+...|...+.. -+-+||+|||| ....+|||+||++++..+..++.+.
T Consensus 7 ~~ddi--vGq~~~~~~L~~~i~~~~~~~~~----------~~~~Ll~GPpG--~GKTtla~~la~~~~~~~~~~~~~~ 70 (239)
T d1ixsb2 7 TLDEY--IGQERLKQKLRVYLEAAKARKEP----------LEHLLLFGPPG--LGKTTLAHVIAHELGVNLRVTSGPA 70 (239)
T ss_dssp SGGGS--CSCHHHHHHHHHHHHHHTTSSSC----------CCCEEEECCTT--SCHHHHHHHHHHHHTCCEEEEETTT
T ss_pred CHHHh--CCHHHHHHHHHHHHHHHHhcCCC----------CCeEEEECCCC--CCHHHHHHHHHHHhCCCeEeccCCc
Confidence 78885 56799999998887766544332 24599999999 8999999999999999999988654
No 98
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=95.74 E-value=0.022 Score=60.37 Aligned_cols=75 Identities=28% Similarity=0.319 Sum_probs=50.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCccccc----------------cccchHHHHHHHHHHHhccCCe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITSK----------------WFGEGEKYVKAVFSLASKIAPS 1045 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s~----------------~~GesE~~Ir~lF~~A~k~~Ps 1045 (1183)
+-..|+||+|+|||+||..++... |..+++++...-+.. .....|+.+.-+-.......+.
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~~~~~~ 137 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVRSGAID 137 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHTTTCCS
T ss_pred eEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHhcCCCc
Confidence 348999999999999999886654 777888886431111 1122344444443444455688
Q ss_pred EEEEeCCcccccCC
Q 001031 1046 VVFVDEVDSMLGRR 1059 (1183)
Q Consensus 1046 ILfIDEID~Ll~~r 1059 (1183)
+|+||-+..++++.
T Consensus 138 liIiDSi~al~~r~ 151 (268)
T d1xp8a1 138 VVVVDSVAALTPRA 151 (268)
T ss_dssp EEEEECTTTCCCST
T ss_pred EEEEecccccccHH
Confidence 99999999988543
No 99
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=95.73 E-value=0.02 Score=53.28 Aligned_cols=33 Identities=21% Similarity=0.322 Sum_probs=25.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~ 1017 (1183)
...||.+|+|+|||+++-.++...+..++.+..
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P 41 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNP 41 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEES
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcC
Confidence 468999999999999887777667766665544
No 100
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=95.61 E-value=0.0085 Score=54.82 Aligned_cols=20 Identities=30% Similarity=0.137 Sum_probs=16.3
Q ss_pred CCceEEEEcCCCChHHHHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAK 1002 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAk 1002 (1183)
....++|++|+|+|||..+-
T Consensus 6 ~~~~~il~~~tGsGKT~~~~ 25 (140)
T d1yksa1 6 KGMTTVLDFHPGAGKTRRFL 25 (140)
T ss_dssp TTCEEEECCCTTSSTTTTHH
T ss_pred cCCcEEEEcCCCCChhHHHH
Confidence 34679999999999997553
No 101
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.58 E-value=0.0033 Score=62.11 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=26.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
.|.-|||.|+||+|||++|+.++...++.++.
T Consensus 13 ~p~liil~G~pGsGKST~a~~l~~~~~~~~i~ 44 (172)
T d1yj5a2 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVN 44 (172)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHTGGGTCEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHhcCCEEEc
Confidence 34569999999999999999999888765543
No 102
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.52 E-value=0.03 Score=57.99 Aligned_cols=36 Identities=17% Similarity=0.204 Sum_probs=27.9
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEec
Q 001031 982 KPCKGILLFGPPGTGKTMLAKAVATEA----GANFINISM 1017 (1183)
Q Consensus 982 kP~~gVLL~GPPGTGKT~LAkAIA~eL----g~pfi~I~~ 1017 (1183)
++..-++|.|+||+|||+++..+|..+ |.++..+++
T Consensus 33 ~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 33 RGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp CTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeee
Confidence 344458999999999999988887542 778877765
No 103
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=95.46 E-value=0.069 Score=54.26 Aligned_cols=35 Identities=26% Similarity=0.294 Sum_probs=26.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSS 1019 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~ 1019 (1183)
+-++|.||+|+|||+.+..+|..+ +..+..+.+..
T Consensus 11 ~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt 48 (207)
T d1ls1a2 11 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADT 48 (207)
T ss_dssp EEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeccc
Confidence 347889999999999888888766 66666665543
No 104
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.37 E-value=0.01 Score=64.62 Aligned_cols=69 Identities=20% Similarity=0.340 Sum_probs=48.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC--CcEEEEe-cCcccc-------ccccchHHHHHHHHHHHhccCCeEEEEeCCc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAG--ANFINIS-MSSITS-------KWFGEGEKYVKAVFSLASKIAPSVVFVDEVD 1053 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg--~pfi~I~-~s~L~s-------~~~GesE~~Ir~lF~~A~k~~PsILfIDEID 1053 (1183)
.+||+.|++|+|||++.++++.... ..++.+. ..++.- ...+..+-....++..+.+..|..|++.|+-
T Consensus 167 ~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEiR 245 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGELR 245 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCCC
T ss_pred CCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCccC
Confidence 4799999999999999999998873 3455442 222210 1112222245667788889999999999994
No 105
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=95.36 E-value=0.0073 Score=67.37 Aligned_cols=73 Identities=25% Similarity=0.366 Sum_probs=45.5
Q ss_pred CCCEEEEEcChhhhhc-----CChhhHHHHHHHHhcCCCCEEEEEeccCCCcccccCCCCCceeeccCcchhhhccccCC
Q 001031 703 SSPLIVFVKDIEKSLT-----GNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFP 777 (1183)
Q Consensus 703 ~~P~Ilf~~Die~~l~-----~~~~~~~~i~~~L~~L~g~vivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~~~d~~~P 777 (1183)
.+++||||+|++.++. |+.+..+.|+..|. +|.+-|||+|+.-+++ +
T Consensus 114 ~~~~ilfide~h~l~~~g~~~g~~d~a~~Lkp~L~--rg~~~~I~~tT~~ey~------------~-------------- 165 (387)
T d1qvra2 114 QGEVILFIDELHTVVGAGKAEGAVDAGNMLKPALA--RGELRLIGATTLDEYR------------E-------------- 165 (387)
T ss_dssp CSSEEEEECCC-------------------HHHHH--TTCCCEEEEECHHHHH------------H--------------
T ss_pred CCceEEEeccHHHHhcCCCCCCcccHHHHHHHHHh--CCCcceeeecCHHHHH------------H--------------
Confidence 4689999999999986 46789999999998 8999999999933320 0
Q ss_pred CCccccccccccchHHHHHhhhhCCCeEEecCCchhHHHH
Q 001031 778 DNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALLS 817 (1183)
Q Consensus 778 D~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALlR 817 (1183)
.+.+..|.++| ++|.|.+|..+...+
T Consensus 166 -------------~e~d~al~rrF-~~v~v~ep~~~~~~~ 191 (387)
T d1qvra2 166 -------------IEKDPALERRF-QPVYVDEPTVEETIS 191 (387)
T ss_dssp -------------HTTCTTTCSCC-CCEEECCCCHHHHHH
T ss_pred -------------hcccHHHHHhc-ccccCCCCcHHHHHH
Confidence 01133677888 789999999888755
No 106
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=95.27 E-value=0.0067 Score=57.61 Aligned_cols=31 Identities=29% Similarity=0.195 Sum_probs=25.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~ 1016 (1183)
-+.|+|++|+|||||++.|++++ |..+..+.
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~ 37 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIK 37 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEec
Confidence 58999999999999999999886 55554443
No 107
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=95.22 E-value=0.0055 Score=62.27 Aligned_cols=73 Identities=23% Similarity=0.345 Sum_probs=54.6
Q ss_pred CCCEEEEEcChhhhhc-----CChhhHHHHHHHHhcCCCCEEEEEeccCCCcccccCCCCCceeeccCcchhhhccccCC
Q 001031 703 SSPLIVFVKDIEKSLT-----GNNDAYGALKSKLENLPSNVVVIGSHTQLDSRKEKSHPGGLLFTKFGSNQTALLDLAFP 777 (1183)
Q Consensus 703 ~~P~Ilf~~Die~~l~-----~~~~~~~~i~~~L~~L~g~vivIgs~~~~d~~k~k~~~~~~~~~~~~~~~~~~~d~~~P 777 (1183)
.+++||||+|++.++. +..++.+.|+..|. +|.+-|||+|+..+++
T Consensus 114 ~~~iILfIDeih~l~~~g~~~g~~d~~~~Lkp~L~--rg~l~~IgatT~eey~--------------------------- 164 (195)
T d1jbka_ 114 EGNVILFIDELHTMVGAGKADGAMDAGNMLKPALA--RGELHCVGATTLDEYR--------------------------- 164 (195)
T ss_dssp TTTEEEEEETGGGGTT------CCCCHHHHHHHHH--TTSCCEEEEECHHHHH---------------------------
T ss_pred CCcEEEEcchHHHHhcCCCCCCcccHHHHHHHHHh--CCCceEEecCCHHHHH---------------------------
Confidence 4689999999999986 34678899999999 7999999999932221
Q ss_pred CCccccccccccchHHHHHhhhhCCCeEEecCCchhHHH
Q 001031 778 DNFSRLHDRSKETPKALKQISRLFPNKVTIQLPQDEALL 816 (1183)
Q Consensus 778 D~~d~~~~~~~~~~~~~~~l~~lf~~~i~i~~P~DeALl 816 (1183)
...+.+..|.++| ++|.|.+|+.+.-+
T Consensus 165 -----------~~~e~d~aL~rrF-~~I~V~Ep~~e~t~ 191 (195)
T d1jbka_ 165 -----------QYIEKDAALERRF-QKVFVAEPSVEDTI 191 (195)
T ss_dssp -----------HHTTTCHHHHTTE-EEEECCCCCHHHHH
T ss_pred -----------HHHHcCHHHHhcC-CEeecCCCCHHHHH
Confidence 0111234688888 78899998776654
No 108
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=95.15 E-value=0.0068 Score=58.03 Aligned_cols=24 Identities=21% Similarity=0.365 Sum_probs=22.1
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhC
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
-|+|.|+||+||||+++.|+..++
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHH
Confidence 489999999999999999999884
No 109
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.86 E-value=0.088 Score=54.33 Aligned_cols=23 Identities=22% Similarity=0.364 Sum_probs=20.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
+.++|+||..+|||++.|+|+-.
T Consensus 42 ~~~iiTGpN~~GKSt~lk~i~l~ 64 (234)
T d1wb9a2 42 RMLIITGPNMGGKSTYMRQTALI 64 (234)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEEeccCchhhHHHHHHHHHH
Confidence 56899999999999999998754
No 110
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.77 E-value=0.15 Score=51.36 Aligned_cols=40 Identities=20% Similarity=0.265 Sum_probs=32.1
Q ss_pred CCEEEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccC
Q 001031 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1183)
Q Consensus 704 ~P~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~~ 746 (1183)
...|++|+|+|.+ ..+..+.+.+.++..+.++++|.++|.
T Consensus 131 ~~~iiiide~d~l---~~~~~~~l~~~~e~~~~~~~~Il~tn~ 170 (252)
T d1sxje2 131 RYKCVIINEANSL---TKDAQAALRRTMEKYSKNIRLIMVCDS 170 (252)
T ss_dssp CCEEEEEECTTSS---CHHHHHHHHHHHHHSTTTEEEEEEESC
T ss_pred CceEEEecccccc---ccccchhhhcccccccccccceeeecc
Confidence 3459999999994 445566788889988999999999984
No 111
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=94.75 E-value=0.025 Score=62.22 Aligned_cols=20 Identities=35% Similarity=0.459 Sum_probs=16.8
Q ss_pred eEEEEcCCCChHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVA 1005 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA 1005 (1183)
-++|+||||||||+++..+.
T Consensus 165 ~~vI~G~pGTGKTt~i~~~l 184 (359)
T d1w36d1 165 ISVISGGPGTGKTTTVAKLL 184 (359)
T ss_dssp EEEEECCTTSTHHHHHHHHH
T ss_pred eEEEEcCCCCCceehHHHHH
Confidence 58999999999999876554
No 112
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=94.63 E-value=0.012 Score=56.59 Aligned_cols=31 Identities=26% Similarity=0.229 Sum_probs=25.0
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhC---CcEEEEe
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAG---ANFINIS 1016 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg---~pfi~I~ 1016 (1183)
=++|.|+||+||||+++.|++.++ +.+..+.
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~ 36 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIIN 36 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 368899999999999999999984 4454444
No 113
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.61 E-value=0.038 Score=58.45 Aligned_cols=73 Identities=23% Similarity=0.289 Sum_probs=47.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCcccc-c---------------cccchHHHHHHHHHHHhccCCe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMSSITS-K---------------WFGEGEKYVKAVFSLASKIAPS 1045 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L~s-~---------------~~GesE~~Ir~lF~~A~k~~Ps 1045 (1183)
+-+.|+||+|+|||+||..++... |..+++++...-++ . .....|..+.-+-.......+.
T Consensus 61 ~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~~~~~~ 140 (269)
T d1mo6a1 61 RVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALD 140 (269)
T ss_dssp SEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHHTTCEE
T ss_pred eeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHHhcCCCC
Confidence 448999999999999987776544 77788888644111 0 1122344333332333455678
Q ss_pred EEEEeCCccccc
Q 001031 1046 VVFVDEVDSMLG 1057 (1183)
Q Consensus 1046 ILfIDEID~Ll~ 1057 (1183)
+|+||-+..+.+
T Consensus 141 liIiDSi~al~~ 152 (269)
T d1mo6a1 141 IVVIDSVAALVP 152 (269)
T ss_dssp EEEEECSTTCCC
T ss_pred EEEEeccccccc
Confidence 999999998874
No 114
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.60 E-value=0.043 Score=54.64 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=46.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---------CCcEEEEecCccccc-c--------------------------cc
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA---------GANFINISMSSITSK-W--------------------------FG 1026 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL---------g~pfi~I~~s~L~s~-~--------------------------~G 1026 (1183)
+..-++|+||||+|||+|+..+|... +.+++.++...-... + ..
T Consensus 33 ~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (251)
T d1szpa2 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYNAD 112 (251)
T ss_dssp SSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGHHHHHHTCCCHHHHGGGEEEEECCSTT
T ss_pred CCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHHHHHHhcCCchhhhhcceEEEeccchh
Confidence 33569999999999999999887543 345666654321100 0 00
Q ss_pred chHHHHHHHHHHHhccCCeEEEEeCCccccc
Q 001031 1027 EGEKYVKAVFSLASKIAPSVVFVDEVDSMLG 1057 (1183)
Q Consensus 1027 esE~~Ir~lF~~A~k~~PsILfIDEID~Ll~ 1057 (1183)
.................+.++++|.+..+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~ds~~~~~~ 143 (251)
T d1szpa2 113 HQLRLLDAAAQMMSESRFSLIVVDSVMALYR 143 (251)
T ss_dssp THHHHHHHTHHHHHHSCEEEEEEETGGGGGS
T ss_pred HHHHHHHHHHHHhhccccceeeehhhhhhhh
Confidence 1122233344445556678899999987763
No 115
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=94.50 E-value=0.012 Score=59.94 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=30.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEecCcc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA----GANFINISMSSI 1020 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL----g~pfi~I~~s~L 1020 (1183)
.-|+|+|.||+|||+||++|++.+ +.+++.++...+
T Consensus 25 ~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~i 64 (208)
T d1m7ga_ 25 LTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNI 64 (208)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHH
Confidence 569999999999999999999765 678888887654
No 116
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=94.25 E-value=0.015 Score=65.85 Aligned_cols=65 Identities=18% Similarity=0.285 Sum_probs=54.2
Q ss_pred hhHHHHHHhhhhhhcccccccc-ccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCCC
Q 001031 462 DITKNVLIASTYVHLKCNNFAK-YASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1183)
Q Consensus 462 e~tk~~L~~~~~~hLk~~~~~k-~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1183)
|+.|.+|--|.|=|.|.-.+.. .-..+.+. -|||-||+| -....|||+||+..+||+.++|.+.|
T Consensus 20 ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ks--NILliGPTG--vGKTlLAr~LAk~l~VPFv~~daT~f 85 (443)
T d1g41a_ 20 ADAKRAVAIALRNRWRRMQLQEPLRHEVTPK--NILMIGPTG--VGKTEIARRLAKLANAPFIKVEATKF 85 (443)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTTTTCCCC--CEEEECCTT--SSHHHHHHHHHHHTTCCEEEEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccccc--cEEEECCCC--CCHHHHHHHHHHHhCCCEEEeeccee
Confidence 8999999999999987654432 22244443 799999999 58999999999999999999999998
No 117
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=93.73 E-value=0.042 Score=57.97 Aligned_cols=55 Identities=27% Similarity=0.383 Sum_probs=37.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCccccccccchHHHHHHHHHHHhccCCeEEEEeCCcc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDS 1054 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~L~s~~~GesE~~Ir~lF~~A~k~~PsILfIDEID~ 1054 (1183)
..++|+||++||||+++.+|++.+|.- ..++... + -|..+.-....++++||.+.
T Consensus 105 n~~~l~G~~~tGKS~f~~~i~~~lg~~-~~~~~~~--~------------~f~l~~l~~k~~~~~~e~~~ 159 (267)
T d1u0ja_ 105 NTIWLFGPATTGKTNIAEAIAHTVPFY-GCVNWTN--E------------NFPFNDCVDKMVIWWEEGKM 159 (267)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSSCE-EECCTTC--S------------SCTTGGGSSCSEEEECSCCE
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHhcch-hhccccC--C------------CccccccCCCEEEEEeCCCc
Confidence 569999999999999999999999653 2222111 1 12233333446899999863
No 118
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=93.33 E-value=0.032 Score=53.94 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=24.1
Q ss_pred EEEEcCCCChHHHHHHHHHHHhC---CcEEEEe
Q 001031 987 ILLFGPPGTGKTMLAKAVATEAG---ANFINIS 1016 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eLg---~pfi~I~ 1016 (1183)
|-|.||+|+||||||+.|+..++ .....+.
T Consensus 25 IgI~G~~GSGKSTla~~L~~~l~~~~~~~~~~~ 57 (198)
T d1rz3a_ 25 LGIDGLSRSGKTTLANQLSQTLREQGISVCVFH 57 (198)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHhccccccceecc
Confidence 66999999999999999998774 4444444
No 119
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.20 E-value=0.23 Score=48.82 Aligned_cols=23 Identities=30% Similarity=0.465 Sum_probs=20.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
+.|+|.|+||+|||+|..++...
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~~ 23 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLTG 23 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHS
T ss_pred CEEEEECCCCCCHHHHHHHHHcC
Confidence 47999999999999999999764
No 120
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=93.20 E-value=0.1 Score=53.52 Aligned_cols=26 Identities=35% Similarity=0.418 Sum_probs=21.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
|..-.+|+|+||+|||+|+..+|..+
T Consensus 28 pg~~~~i~G~~G~GKS~l~l~la~~i 53 (274)
T d1nlfa_ 28 AGTVGALVSPGGAGKSMLALQLAAQI 53 (274)
T ss_dssp TTSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 33457999999999999999888653
No 121
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.07 E-value=0.031 Score=55.42 Aligned_cols=28 Identities=36% Similarity=0.549 Sum_probs=24.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi 1013 (1183)
.|+|.||+|+|||+|++.++...+.-|.
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~ 29 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFG 29 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCcee
Confidence 3899999999999999999998865443
No 122
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.03 E-value=0.028 Score=55.41 Aligned_cols=27 Identities=41% Similarity=0.639 Sum_probs=23.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANF 1012 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pf 1012 (1183)
.|+|.||+|+|||+|++.++++....|
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 499999999999999999999875433
No 123
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.96 E-value=0.11 Score=51.86 Aligned_cols=32 Identities=25% Similarity=0.244 Sum_probs=26.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~ 1017 (1183)
+.+|.+|+|+|||.++-+++.+++.+.+.+..
T Consensus 87 ~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 87 RGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp EEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CcEEEeCCCCCceehHHhHHHHhcCceeEEEc
Confidence 45788999999999999999999877766554
No 124
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=92.75 E-value=0.23 Score=50.86 Aligned_cols=22 Identities=27% Similarity=0.397 Sum_probs=19.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
-++|+||...|||++.|.|+-.
T Consensus 37 ~~iiTGpN~~GKSt~lk~i~l~ 58 (224)
T d1ewqa2 37 LVLITGPNMAGKSTFLRQTALI 58 (224)
T ss_dssp EEEEESCSSSSHHHHHHHHHHH
T ss_pred EEEEECCCccccchhhhhhHHH
Confidence 4899999999999999988644
No 125
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=92.24 E-value=0.051 Score=59.77 Aligned_cols=78 Identities=31% Similarity=0.471 Sum_probs=60.2
Q ss_pred HHHHHhhcccCCCccccccccccccchhhHHHHHHhhhhhhccccccccccC-----------------CCCCCCCceee
Q 001031 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYAS-----------------DLPTMCPRILL 497 (1183)
Q Consensus 435 ~k~~l~~~i~~~~~~~vsfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~-----------------~l~~~s~rILL 497 (1183)
.+++|.+.||-- ++.|.++-.|.|-|.|...+.+-.+ +.++. -||+
T Consensus 11 i~~~L~~~ViGQ---------------d~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~~~p~~--niLf 73 (364)
T d1um8a_ 11 LKAVLDNYVIGQ---------------EQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKS--NILL 73 (364)
T ss_dssp HHHHHHTTCCSC---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHTTCCCC--CEEE
T ss_pred HHHHhCCeecCh---------------HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccCCCc--ceee
Confidence 567788888844 8899999999998877643322111 33333 3999
Q ss_pred cCCCCchHHHHHHHHHHHhhcCCeEEEEecCCCC
Q 001031 498 SGPAGSEIYQETLAKALAKHFSARLLIVDSLLLP 531 (1183)
Q Consensus 498 sgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~~ 531 (1183)
.||.| -...-|||+||+..++++..+|.+-+-
T Consensus 74 iGPTG--vGKTElAk~LA~~~~~~~ir~D~s~~~ 105 (364)
T d1um8a_ 74 IGPTG--SGKTLMAQTLAKHLDIPIAISDATSLT 105 (364)
T ss_dssp ECCTT--SSHHHHHHHHHHHTTCCEEEEEGGGCC
T ss_pred eCCCC--ccHHHHHHHHHhhcccceeehhhhhcc
Confidence 99999 678889999999999999999997753
No 126
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=92.23 E-value=0.26 Score=45.37 Aligned_cols=23 Identities=26% Similarity=0.359 Sum_probs=20.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.|+|.|+||+|||+|+..+...-
T Consensus 2 kivlvG~~~vGKSsLi~~l~~~~ 24 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKLGE 24 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhcCC
Confidence 58999999999999999997653
No 127
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=92.12 E-value=0.028 Score=53.20 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=32.0
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
+++|++.||+| ...-+|||+||++|+.+.+..|...
T Consensus 7 ~K~I~i~G~~G--sGKTTla~~La~~~~~~~i~~~~~~ 42 (192)
T d1lw7a2 7 AKTVAILGGES--SGKSVLVNKLAAVFNTTSAWEYGRE 42 (192)
T ss_dssp CEEEEEECCTT--SHHHHHHHHHHHHTTCEEECCTTHH
T ss_pred ceEEEEECCCC--CCHHHHHHHHHHHhCCCeEeeehHH
Confidence 57899999999 7999999999999999988766655
No 128
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=92.11 E-value=0.69 Score=44.13 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
-|.|.|.+|+|||+|+.++...
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4999999999999999999754
No 129
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.99 E-value=0.044 Score=52.60 Aligned_cols=27 Identities=26% Similarity=0.316 Sum_probs=22.9
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 982 KPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 982 kP~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.+..-++|+||||+|||+|+..+|...
T Consensus 21 ~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 21 ETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp ETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred cCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 344569999999999999999998765
No 130
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=91.95 E-value=0.25 Score=46.18 Aligned_cols=21 Identities=33% Similarity=0.597 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|+||+|||+|..++..
T Consensus 3 kI~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999964
No 131
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=91.88 E-value=0.28 Score=46.40 Aligned_cols=22 Identities=27% Similarity=0.415 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|...+...
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~~ 25 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIASG 25 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 5899999999999999998654
No 132
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=91.82 E-value=0.071 Score=51.01 Aligned_cols=30 Identities=23% Similarity=0.228 Sum_probs=24.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~ 1016 (1183)
+-+.|++|+|||||+..++.++ |..+..+.
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 5699999999999999999887 56665554
No 133
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=91.75 E-value=0.1 Score=49.36 Aligned_cols=22 Identities=32% Similarity=0.510 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|...+...
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 5999999999999999998653
No 134
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.36 E-value=0.049 Score=54.25 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=22.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCc
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGAN 1011 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~p 1011 (1183)
=|-|.|++|+||||+|+.|+..++..
T Consensus 4 iIgI~G~~gSGKSTla~~L~~~l~~~ 29 (213)
T d1uj2a_ 4 LIGVSGGTASGKSSVCAKIVQLLGQN 29 (213)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTGG
T ss_pred EEEEECCCCCCHHHHHHHHHHHhchh
Confidence 36699999999999999999998653
No 135
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=90.79 E-value=0.06 Score=52.49 Aligned_cols=24 Identities=21% Similarity=0.457 Sum_probs=21.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhC
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
=|+|.||+|+|||+|++.+.....
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 489999999999999999998863
No 136
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.62 E-value=0.085 Score=52.78 Aligned_cols=27 Identities=30% Similarity=0.300 Sum_probs=22.5
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 982 KPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 982 kP~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.+..-++|+||||+|||+||..+|...
T Consensus 35 p~G~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 35 ESMAITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp CSSEEEEEECCTTCTHHHHHHHHHHHT
T ss_pred cCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 344569999999999999999998754
No 137
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=90.56 E-value=0.06 Score=54.14 Aligned_cols=24 Identities=38% Similarity=0.447 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-++|+||||+|||+|+-.+|...
T Consensus 37 ~~~li~G~pGsGKT~~~lq~~~~~ 60 (254)
T d1pzna2 37 AITEVFGEFGSGKTQLAHTLAVMV 60 (254)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHHh
Confidence 458999999999999999988764
No 138
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=90.55 E-value=0.091 Score=51.30 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=25.1
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhCCc
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eLg~p 1011 (1183)
|..-|+|.|+=|+|||++++.+++.+|..
T Consensus 32 ~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 32 KAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 43458999999999999999999999764
No 139
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.53 E-value=0.4 Score=46.53 Aligned_cols=22 Identities=36% Similarity=0.664 Sum_probs=20.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|+||+|||+|..++.+.
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7999999999999999999865
No 140
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=90.41 E-value=0.67 Score=44.86 Aligned_cols=31 Identities=29% Similarity=0.495 Sum_probs=21.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH----hCCcEEEEe
Q 001031 986 GILLFGPPGTGKTMLAKAVATE----AGANFINIS 1016 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e----Lg~pfi~I~ 1016 (1183)
++|+++|+|+|||.++-.++.. .+..++.+.
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~ 59 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLA 59 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEEC
T ss_pred CeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEc
Confidence 5889999999999876655543 244455544
No 141
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=90.40 E-value=0.69 Score=45.28 Aligned_cols=18 Identities=50% Similarity=0.743 Sum_probs=15.6
Q ss_pred ceEEEEcCCCChHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAK 1002 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAk 1002 (1183)
+.+++.+|+|+|||+.+.
T Consensus 41 ~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp SCEEEECSSHHHHHHHHH
T ss_pred CCEEEEcCCCCchhHHHH
Confidence 469999999999998763
No 142
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=89.80 E-value=0.31 Score=50.34 Aligned_cols=24 Identities=29% Similarity=0.483 Sum_probs=21.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHH
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
...|+|.|.+|+|||+|+.+|..+
T Consensus 32 ~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 32 SLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp EEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CcEEEEECCCCCcHHHHHHHHhCC
Confidence 357999999999999999999754
No 143
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=89.63 E-value=0.13 Score=50.23 Aligned_cols=29 Identities=24% Similarity=0.288 Sum_probs=24.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
.=|-|+|++|+|||++|+.+ .+.|++++.
T Consensus 4 ~IIgitG~~gSGKstva~~l-~~~g~~~~~ 32 (191)
T d1uf9a_ 4 IIIGITGNIGSGKSTVAALL-RSWGYPVLD 32 (191)
T ss_dssp EEEEEEECTTSCHHHHHHHH-HHTTCCEEE
T ss_pred EEEEEECCCCCCHHHHHHHH-HHCCCeEEE
Confidence 34668999999999999998 568888764
No 144
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=89.47 E-value=0.34 Score=46.21 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=20.7
Q ss_pred CCceEEEEcCCCChHHHHHHHHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
|...|+|.|.+|+|||+|+..+..
T Consensus 3 ~~~KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 3 ALHKVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHH
T ss_pred ceeEEEEECCCCcCHHHHHHHHHh
Confidence 335699999999999999999875
No 145
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=89.46 E-value=0.13 Score=51.20 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=23.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHh--CCcEEEEe
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA--GANFINIS 1016 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL--g~pfi~I~ 1016 (1183)
|++.|++|+|||||..++.+.+ +.....++
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~ivn 34 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVN 34 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEEe
Confidence 7899999999999999998776 33444443
No 146
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=89.41 E-value=0.36 Score=45.61 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=20.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
..|+|.|.||+|||+|+..+...
T Consensus 16 ~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 16 HKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHTT
T ss_pred EEEEEECCCCCCHHHHHHHHhcC
Confidence 57999999999999999998754
No 147
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=89.33 E-value=0.11 Score=51.41 Aligned_cols=30 Identities=30% Similarity=0.506 Sum_probs=25.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
.++|||.|++|+|||++|.++... |..++.
T Consensus 14 g~gvl~~G~sG~GKStlal~l~~~-g~~lv~ 43 (176)
T d1kkma_ 14 GLGVLITGDSGVGKSETALELVQR-GHRLIA 43 (176)
T ss_dssp TEEEEEECCTTSCHHHHHHHHHHT-TCEEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEEe
Confidence 478999999999999999888764 776654
No 148
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.11 E-value=0.24 Score=47.04 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|+..+...
T Consensus 5 Ki~viG~~~vGKTsli~~l~~~ 26 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQN 26 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999998764
No 149
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=89.08 E-value=0.33 Score=46.04 Aligned_cols=22 Identities=45% Similarity=0.593 Sum_probs=19.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
..|+|.|++|+|||+|+..+..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4599999999999999998854
No 150
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=88.38 E-value=0.65 Score=44.11 Aligned_cols=22 Identities=27% Similarity=0.395 Sum_probs=19.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
..|+|.|++|+|||+|...+..
T Consensus 13 ~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 13 MRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp EEEEEEEETTSSHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4699999999999999998864
No 151
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=88.37 E-value=0.11 Score=51.30 Aligned_cols=26 Identities=19% Similarity=0.171 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+..-++|+|+||+|||+++..+|..+
T Consensus 33 ~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 33 SQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 33458999999999999999998765
No 152
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=88.18 E-value=0.21 Score=48.85 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=27.0
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
|.|.|..|+||||+++.|++.+ |.+++.+..+
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~P 37 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFP 37 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 6789999999999999999876 7777776544
No 153
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.05 E-value=1.2 Score=42.69 Aligned_cols=21 Identities=29% Similarity=0.457 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|++|+|||+|+..+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 489999999999999998874
No 154
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.97 E-value=0.2 Score=50.24 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=25.9
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~ 1017 (1183)
|.|.|+.|+||||+++.|++.+ |.+++.+..
T Consensus 6 I~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~~ 39 (209)
T d1nn5a_ 6 IVLEGVDRAGKSTQSRKLVEALCAAGHRAELLRF 39 (209)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeC
Confidence 6677999999999999999877 777776643
No 155
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=87.97 E-value=0.38 Score=51.31 Aligned_cols=73 Identities=19% Similarity=0.253 Sum_probs=52.7
Q ss_pred HHHHHhhcccCCCccccccccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHH
Q 001031 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKAL 514 (1183)
Q Consensus 435 ~k~~l~~~i~~~~~~~vsfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKAL 514 (1183)
.++.|.+.|+-- |+.+..|..+.+.|... +. +-...-.-+||.||+| -....|||+|
T Consensus 16 l~~~L~~~viGQ---------------~~a~~~v~~~v~~~~~~--l~----~~~~p~~~~lf~Gp~G--vGKT~lak~l 72 (315)
T d1r6bx3 16 LGDRLKMLVFGQ---------------DKAIEALTEAIKMARAG--LG----HEHKPVGSFLFAGPTG--VGKTEVTVQL 72 (315)
T ss_dssp HHHHHTTTSCSC---------------HHHHHHHHHHHHHHHTT--CS----CTTSCSEEEEEECSTT--SSHHHHHHHH
T ss_pred HHHHhCCeecCh---------------HHHHHHHHHHHHHHHcc--CC----CCCCCceEEEEECCCc--chhHHHHHHH
Confidence 456666666654 88888888887655322 10 0001112489999999 7899999999
Q ss_pred HhhcCCeEEEEecCCC
Q 001031 515 AKHFSARLLIVDSLLL 530 (1183)
Q Consensus 515 A~~f~a~LLilDs~~~ 530 (1183)
|+.++.+++.+|.+.+
T Consensus 73 a~~l~~~~i~~d~s~~ 88 (315)
T d1r6bx3 73 SKALGIELLRFDMSEY 88 (315)
T ss_dssp HHHHTCEEEEEEGGGC
T ss_pred HhhccCCeeEeccccc
Confidence 9999999999998765
No 156
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=87.83 E-value=0.13 Score=53.83 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=18.0
Q ss_pred ceEEEEcCCCChHHH-HHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTM-LAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~-LAkAIA~eL 1008 (1183)
..+|+.|+||||||+ |+..++..+
T Consensus 25 g~~lV~g~aGSGKTt~l~~ri~~ll 49 (318)
T d1pjra1 25 GPLLIMAGAGSGKTRVLTHRIAYLM 49 (318)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCccHHHHHHHHHHHHH
Confidence 359999999999997 555555543
No 157
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.55 E-value=0.77 Score=45.61 Aligned_cols=51 Identities=20% Similarity=0.237 Sum_probs=28.5
Q ss_pred CCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001031 946 VTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1183)
Q Consensus 946 ~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l--~kP~~gVLL~GPPGTGKT~ 999 (1183)
.+|+|++-.+++.+.|.+.= +.+|....+..+ .-..+.+++..|+|+|||+
T Consensus 3 ~~F~~l~L~~~l~~~l~~~g---~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEMG---WEKPSPIQEESIPIALSGRDILARAKNGTGKSG 55 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTTT---CCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHH
T ss_pred CChhccCcCHHHHHHHHHCC---CCCCCHHHHHHHHHHHcCCCEEeeccCcccccc
Confidence 46777766666666665531 111111111000 0012579999999999996
No 158
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=87.55 E-value=0.3 Score=52.31 Aligned_cols=40 Identities=15% Similarity=0.107 Sum_probs=31.1
Q ss_pred CCCCceEEEEcCCCChHHHHHHHHHHHhC-----CcEEEEecCcc
Q 001031 981 TKPCKGILLFGPPGTGKTMLAKAVATEAG-----ANFINISMSSI 1020 (1183)
Q Consensus 981 ~kP~~gVLL~GPPGTGKT~LAkAIA~eLg-----~pfi~I~~s~L 1020 (1183)
.+.|-=|-|.|++|+||||+|+.|+..+. ..+..+++.++
T Consensus 77 ~k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F 121 (308)
T d1sq5a_ 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGF 121 (308)
T ss_dssp CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGG
T ss_pred CCCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeee
Confidence 34445688999999999999999999873 45666666654
No 159
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=87.32 E-value=0.18 Score=49.64 Aligned_cols=29 Identities=28% Similarity=0.505 Sum_probs=23.8
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi 1013 (1183)
..+|||.|++|+|||++|-++... |..++
T Consensus 15 g~gvli~G~sg~GKS~la~~l~~~-g~~li 43 (169)
T d1ko7a2 15 GVGVLITGDSGIGKSETALELIKR-GHRLV 43 (169)
T ss_dssp TEEEEEEESTTSSHHHHHHHHHHT-TCEEE
T ss_pred CEEEEEEeCCCCCHHHHHHHHHHc-CCeEE
Confidence 468999999999999999887765 66554
No 160
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=87.20 E-value=0.29 Score=50.45 Aligned_cols=17 Identities=29% Similarity=0.307 Sum_probs=14.6
Q ss_pred CCceEEEEcCCCChHHH
Q 001031 983 PCKGILLFGPPGTGKTM 999 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~ 999 (1183)
..+.+|+.+|+|+|||+
T Consensus 8 ~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 8 KKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp TTCEEEECCCTTSSTTT
T ss_pred cCCcEEEEECCCCCHHH
Confidence 34679999999999995
No 161
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=87.19 E-value=0.14 Score=52.89 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=16.5
Q ss_pred ceEEEEcCCCChHHHH-HHHHHH
Q 001031 985 KGILLFGPPGTGKTML-AKAVAT 1006 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~L-AkAIA~ 1006 (1183)
..+||.|+||||||++ +..++.
T Consensus 15 ~~~lI~g~aGTGKTt~l~~rv~~ 37 (306)
T d1uaaa1 15 GPCLVLAGAGSGKTRVITNKIAH 37 (306)
T ss_dssp SEEEECCCTTSCHHHHHHHHHHH
T ss_pred CCEEEEeeCCccHHHHHHHHHHH
Confidence 4589999999999985 444433
No 162
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=87.19 E-value=0.16 Score=50.48 Aligned_cols=30 Identities=30% Similarity=0.462 Sum_probs=24.7
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEEE
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGANFIN 1014 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~ 1014 (1183)
..+|||.|++|+|||++|.++... |..++.
T Consensus 15 g~gvli~G~sG~GKS~lal~l~~~-G~~lva 44 (177)
T d1knxa2 15 GVGVLLTGRSGIGKSECALDLINK-NHLFVG 44 (177)
T ss_dssp TEEEEEEESSSSSHHHHHHHHHTT-TCEEEE
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHc-CCceec
Confidence 478999999999999999888653 766654
No 163
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.18 E-value=0.44 Score=50.50 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=27.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh------CCcEEEEecCcc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA------GANFINISMSSI 1020 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL------g~pfi~I~~s~L 1020 (1183)
-=|-|.|++|+|||||+..|...+ ...+..++..++
T Consensus 28 ~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~Ddf 69 (286)
T d1odfa_ 28 LFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDF 69 (286)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGG
T ss_pred EEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCC
Confidence 345689999999999999887665 345666776664
No 164
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=86.92 E-value=0.15 Score=49.74 Aligned_cols=30 Identities=20% Similarity=0.186 Sum_probs=25.5
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi 1013 (1183)
|.-|.|.|+.|+||||+++.|++.++...+
T Consensus 9 p~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 9 PFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred ceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 356899999999999999999999865443
No 165
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.86 E-value=0.2 Score=49.04 Aligned_cols=24 Identities=25% Similarity=0.564 Sum_probs=21.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+.|+|.||+|+||++|++.+....
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~ 27 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKH 27 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHC
T ss_pred CcEEEECCCCCCHHHHHHHHHHhC
Confidence 359999999999999999998775
No 166
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=86.68 E-value=2.5 Score=43.90 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=24.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH---hCCcEEEEecC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE---AGANFINISMS 1018 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e---Lg~pfi~I~~s 1018 (1183)
..-||+|..|+|||.++-..+.. .|..+..+-..
T Consensus 105 m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt 141 (264)
T d1gm5a3 105 MNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPT 141 (264)
T ss_dssp CCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSC
T ss_pred ceeeeeccccccccHHHHHHHHHHHhcccceeEEeeh
Confidence 56799999999999977665433 36666655543
No 167
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=86.57 E-value=0.08 Score=53.77 Aligned_cols=35 Identities=20% Similarity=0.374 Sum_probs=31.4
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCCC
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1183)
.|||.|||| ....+||||||..++..+++++...+
T Consensus 34 ~ilL~GpPG--tGKT~la~~la~~~~~~~~~i~~d~~ 68 (273)
T d1gvnb_ 34 AFLLGGQPG--SGKTSLRSAIFEETQGNVIVIDNDTF 68 (273)
T ss_dssp EEEEECCTT--SCTHHHHHHHHHHTTTCCEEECTHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHhhcceEEEecHHH
Confidence 499999999 68999999999999999999987554
No 168
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.51 E-value=0.18 Score=46.41 Aligned_cols=22 Identities=27% Similarity=0.505 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|+||+|||+|+..+...
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999998764
No 169
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=86.47 E-value=1.4 Score=41.51 Aligned_cols=30 Identities=23% Similarity=0.363 Sum_probs=23.2
Q ss_pred EEEcCCCChHHH-HHHHHHH--HhCCcEEEEec
Q 001031 988 LLFGPPGTGKTM-LAKAVAT--EAGANFINISM 1017 (1183)
Q Consensus 988 LL~GPPGTGKT~-LAkAIA~--eLg~pfi~I~~ 1017 (1183)
+++||-.+|||+ |.+.+-+ ..|..++.++.
T Consensus 6 ~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp 38 (139)
T d2b8ta1 6 FITGPMFAGKTAELIRRLHRLEYADVKYLVFKP 38 (139)
T ss_dssp EEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEccccCHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 789999999999 7777643 34777777664
No 170
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.41 E-value=1.3 Score=41.17 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~~ 25 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCAG 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998754
No 171
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.34 E-value=0.84 Score=43.31 Aligned_cols=22 Identities=32% Similarity=0.569 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|+..+.+.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~~ 29 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVTN 29 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5899999999999999888763
No 172
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=86.28 E-value=0.17 Score=50.57 Aligned_cols=28 Identities=39% Similarity=0.612 Sum_probs=23.3
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 987 ILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
|-|+|.+|+|||++++.+. .+|++++..
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~vida 33 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGINVIDA 33 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCEEEEH
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCcEEEc
Confidence 5589999999999999875 789876653
No 173
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=86.21 E-value=0.16 Score=47.88 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=20.0
Q ss_pred CceEEEEcCCCChHHHHHHHHHH
Q 001031 984 CKGILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
...|+|.|++|+|||+|..++..
T Consensus 13 ~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 13 TGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp CEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCEEEEECCCCCCHHHHHHHHhC
Confidence 35799999999999999998843
No 174
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=86.11 E-value=0.31 Score=49.13 Aligned_cols=58 Identities=14% Similarity=0.182 Sum_probs=37.9
Q ss_pred cccccccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcCC
Q 001031 449 IEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFSA 520 (1183)
Q Consensus 449 ~~vsfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a 520 (1183)
-+.||||| ++.+.-+.+...|-- +..+..+...-++|.||+| ....-|+.|+|+++..
T Consensus 5 ~~~tFdnF--~vg~~N~~a~~~~~~----------~~~~~~~~~n~l~l~G~~G--~GKTHLl~A~~~~~~~ 62 (213)
T d1l8qa2 5 PKYTLENF--IVGEGNRLAYEVVKE----------ALENLGSLYNPIFIYGSVG--TGKTHLLQAAGNEAKK 62 (213)
T ss_dssp TTCCSSSC--CCCTTTHHHHHHHHH----------HHHTTTTSCSSEEEECSSS--SSHHHHHHHHHHHHHH
T ss_pred CCCChhhc--cCCCcHHHHHHHHHH----------HHhCcCCCCCcEEEECCCC--CcHHHHHHHHHHHhcc
Confidence 35799998 666655544332221 1222223334489999999 7899999999998753
No 175
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=86.07 E-value=0.15 Score=50.65 Aligned_cols=28 Identities=29% Similarity=0.501 Sum_probs=23.6
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEEE
Q 001031 987 ILLFGPPGTGKTMLAKAVATEAGANFINI 1015 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eLg~pfi~I 1015 (1183)
|-|+|+.|||||++|+.+. ++|++++..
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vida 32 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLVDA 32 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEEEH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEEEc
Confidence 4589999999999999886 689888754
No 176
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=85.96 E-value=0.2 Score=46.45 Aligned_cols=23 Identities=30% Similarity=0.473 Sum_probs=20.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
..|+|.|.||+|||+|..++...
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhCC
Confidence 35999999999999999998764
No 177
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=85.24 E-value=0.22 Score=50.08 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=21.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhC
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
=++|.||+|+|||+|.+.+.....
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 489999999999999999998863
No 178
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=85.22 E-value=1.2 Score=47.64 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=22.0
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHh
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
...|=|+||||+|||+|..+++..+
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~ 78 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLL 78 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHH
Confidence 3569999999999999999998765
No 179
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.64 E-value=0.71 Score=43.74 Aligned_cols=21 Identities=43% Similarity=0.817 Sum_probs=18.6
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 3 Ki~lvG~~~vGKTsLi~~~~~ 23 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARIFGG 23 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHhC
Confidence 489999999999999998864
No 180
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.02 E-value=0.36 Score=48.33 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=25.2
Q ss_pred CceEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001031 984 CKGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~eLg~pf 1012 (1183)
|+-|.|.|+-|+||||+++.|+..++...
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcC
Confidence 46689999999999999999999986543
No 181
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=83.89 E-value=0.77 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=24.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcEEEEecC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMS 1018 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL-----g~pfi~I~~s 1018 (1183)
..|||.|..|+|||+|++.+...- |+....++..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~~~~~pTiG~~~~~~~~~ 45 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVD 45 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHCCCCCSCEEEEEEET
T ss_pred CEEEEECCCCCCHHHHHHHHhcCCcCCCCCeEEEEEEEC
Confidence 469999999999999999885442 4444444433
No 182
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=83.71 E-value=0.27 Score=48.68 Aligned_cols=23 Identities=30% Similarity=0.358 Sum_probs=21.0
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
=|.|.|+.|+||||+++.+++.+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 37889999999999999999877
No 183
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.49 E-value=0.28 Score=46.85 Aligned_cols=22 Identities=23% Similarity=0.459 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|++|+|||+|+..+.+.
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTDK 26 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHhcC
Confidence 4899999999999999998754
No 184
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=83.28 E-value=0.26 Score=49.59 Aligned_cols=28 Identities=25% Similarity=0.183 Sum_probs=24.0
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFI 1013 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi 1013 (1183)
-|-|+|+.||||||+|+.++..+|++++
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g~~~i 30 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYSAVKY 30 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSCEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHhCCCeEE
Confidence 3779999999999999999998876543
No 185
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=83.26 E-value=11 Score=38.79 Aligned_cols=24 Identities=33% Similarity=0.583 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
++|-|.|..|+|||+|+.++....
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHc
Confidence 578999999999999999997654
No 186
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=83.07 E-value=0.4 Score=52.33 Aligned_cols=33 Identities=27% Similarity=0.543 Sum_probs=26.8
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~ 1017 (1183)
+|+++.|++|+|||++++.+...+ +.+++.++.
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 689999999999999887766543 777777764
No 187
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=82.97 E-value=1.8 Score=46.18 Aligned_cols=34 Identities=24% Similarity=0.383 Sum_probs=26.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---C--CcEEEEecC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---G--ANFINISMS 1018 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g--~pfi~I~~s 1018 (1183)
..|=|.||||+|||+|..+++..+ + .-++.++.+
T Consensus 52 ~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDps 90 (323)
T d2qm8a1 52 IRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPS 90 (323)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGG
T ss_pred eEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccc
Confidence 568999999999999999998764 3 344555543
No 188
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=81.79 E-value=0.28 Score=49.11 Aligned_cols=24 Identities=38% Similarity=0.555 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+.|.||.|+|||+|.+.|+..+
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~gl~ 51 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTISTYL 51 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCChHHHHHHHHhccc
Confidence 458899999999999999998765
No 189
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.77 E-value=0.36 Score=45.64 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 6 KivlvG~~~vGKTsli~~~~~~ 27 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTEK 27 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998764
No 190
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.65 E-value=0.55 Score=46.97 Aligned_cols=32 Identities=25% Similarity=0.206 Sum_probs=27.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEec
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINISM 1017 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~ 1017 (1183)
=|.|.|+-|+||||+++.+++.+...+..+.-
T Consensus 5 ~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~~ 36 (214)
T d1tmka_ 5 LILIEGLDRTGKTTQCNILYKKLQPNCKLLKF 36 (214)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHTTTSEEEEES
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhCCEEEEE
Confidence 38899999999999999999999776665543
No 191
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.60 E-value=0.87 Score=43.65 Aligned_cols=19 Identities=37% Similarity=0.614 Sum_probs=18.0
Q ss_pred eEEEEcCCCChHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAV 1004 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAI 1004 (1183)
.|+|.|.+|+|||+|+..+
T Consensus 4 KivllG~~~vGKTsll~r~ 22 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQM 22 (200)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 5899999999999999988
No 192
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=81.47 E-value=0.38 Score=45.42 Aligned_cols=21 Identities=14% Similarity=0.351 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|++|+|||+|+..+.+
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999998875
No 193
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.90 E-value=0.4 Score=45.27 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~~ 26 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVTG 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998764
No 194
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=80.89 E-value=0.41 Score=45.51 Aligned_cols=22 Identities=32% Similarity=0.440 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|++|+|||+|+..+...
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~~ 28 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYADD 28 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHcC
Confidence 4999999999999999998764
No 195
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=80.67 E-value=0.32 Score=45.37 Aligned_cols=32 Identities=38% Similarity=0.578 Sum_probs=28.0
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
+.|+|.|||| -..-++|++||+.|+.+++-.|
T Consensus 5 ~~I~i~G~pG--sGKTTia~~La~~l~~~~i~~~ 36 (173)
T d1rkba_ 5 PNILLTGTPG--VGKTTLGKELASKSGLKYINVG 36 (173)
T ss_dssp CCEEEECSTT--SSHHHHHHHHHHHHCCEEEEHH
T ss_pred CEEEEECCCC--CCHHHHHHHHHHHHCCcEEech
Confidence 6899999999 6899999999999999876443
No 196
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.53 E-value=0.89 Score=43.19 Aligned_cols=22 Identities=41% Similarity=0.545 Sum_probs=18.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|++|+|||+|+..+...
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~~ 26 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLTG 26 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC--
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999987654
No 197
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=80.47 E-value=0.36 Score=44.99 Aligned_cols=22 Identities=27% Similarity=0.585 Sum_probs=20.0
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|.|.|.||+|||+|+.++..+
T Consensus 2 kI~liG~~n~GKSSLin~l~g~ 23 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLNE 23 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999765
No 198
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=80.47 E-value=0.51 Score=43.90 Aligned_cols=34 Identities=15% Similarity=0.219 Sum_probs=30.2
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs 527 (1183)
++=|+|+||+| -..-++||+||+.|+.+.+.+|.
T Consensus 3 ~kiI~l~G~~G--sGKsTva~~L~~~l~~~~~~~~~ 36 (178)
T d1qhxa_ 3 TRMIILNGGSS--AGKSGIVRCLQSVLPEPWLAFGV 36 (178)
T ss_dssp CCEEEEECCTT--SSHHHHHHHHHHHSSSCEEEEEH
T ss_pred CeEEEEECCCC--CCHHHHHHHHHHHcCCCeEEeec
Confidence 45689999999 68999999999999999888875
No 199
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.35 E-value=0.41 Score=45.49 Aligned_cols=22 Identities=36% Similarity=0.603 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|++.+.+.
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~~ 28 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQG 28 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999999863
No 200
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=80.06 E-value=0.42 Score=45.31 Aligned_cols=21 Identities=29% Similarity=0.594 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|.|.|++|+|||+|+.++..
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999964
No 201
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=80.03 E-value=0.4 Score=49.55 Aligned_cols=22 Identities=32% Similarity=0.662 Sum_probs=19.7
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+.|.||.|+|||+|.+.|+..+
T Consensus 27 ~~liGpnGaGKSTll~~i~Gl~ 48 (240)
T d2onka1 27 CVLLGPTGAGKSVFLELIAGIV 48 (240)
T ss_dssp EEEECCTTSSHHHHHHHHHTSS
T ss_pred EEEECCCCChHHHHHHHHHcCC
Confidence 5578999999999999999866
No 202
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.89 E-value=0.46 Score=45.08 Aligned_cols=22 Identities=23% Similarity=0.415 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|.+|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~~ 29 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVKG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999998854
No 203
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.85 E-value=0.46 Score=45.38 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|++|+|||+|+..+.+.
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~~ 27 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTRN 27 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998653
No 204
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=79.76 E-value=0.4 Score=49.85 Aligned_cols=26 Identities=27% Similarity=0.422 Sum_probs=22.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+...+-|.||+|+|||||++.|+..+
T Consensus 40 ~Ge~iaivG~sGsGKSTLl~ll~gl~ 65 (253)
T d3b60a1 40 AGKTVALVGRSGSGKSTIASLITRFY 65 (253)
T ss_dssp TTCEEEEEECTTSSHHHHHHHHTTTT
T ss_pred CCCEEEEECCCCChHHHHHHHHhccc
Confidence 34569999999999999999998655
No 205
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=79.75 E-value=0.93 Score=46.30 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=30.1
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
.++-+++.|.=|+|||+++.++|..+ |..+.-+++.
T Consensus 7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~D 45 (296)
T d1ihua1 7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTD 45 (296)
T ss_dssp CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 45678999999999999999998877 7777777754
No 206
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=79.74 E-value=0.49 Score=48.61 Aligned_cols=24 Identities=29% Similarity=0.567 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||||.+.|+...
T Consensus 27 ei~~liGpsGsGKSTLl~~i~Gl~ 50 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMIAGLE 50 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 458999999999999999998765
No 207
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.49 E-value=0.48 Score=44.83 Aligned_cols=21 Identities=29% Similarity=0.381 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998875
No 208
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=79.37 E-value=0.45 Score=48.88 Aligned_cols=24 Identities=21% Similarity=0.506 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||+|+|||||.+.|+...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~gl~ 55 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTMLNIIGCLD 55 (230)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCcchhhHhccCCC
Confidence 458999999999999999998755
No 209
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=79.35 E-value=0.4 Score=49.53 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=22.7
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+...+-|.||+|+|||||++.|+..+
T Consensus 28 ~Ge~vaIvG~sGsGKSTLl~ll~gl~ 53 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKSTLTKLIQRFY 53 (241)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHhcC
Confidence 44569999999999999999998765
No 210
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.28 E-value=0.48 Score=49.91 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=22.6
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+..-+-|.||.|+|||+|++.|+..+
T Consensus 61 ~Ge~vaivG~nGsGKSTLl~~i~Gl~ 86 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTSLLMLILGEL 86 (281)
T ss_dssp TTCEEEEEESTTSSHHHHHHHHHTSS
T ss_pred CCCEEEEECCCCChHHHHHHHHhCCC
Confidence 44558999999999999999998766
No 211
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=79.28 E-value=0.41 Score=50.77 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=25.9
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecCcc
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMSSI 1020 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s~L 1020 (1183)
=|-++|++|+|||++++++++.+ +.....+.+.++
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsf 43 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAF 43 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGG
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCC
Confidence 48999999999999999998876 667667766654
No 212
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=79.19 E-value=0.45 Score=45.25 Aligned_cols=21 Identities=24% Similarity=0.388 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|+||+|||+|..+|..
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999974
No 213
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=79.11 E-value=0.45 Score=49.14 Aligned_cols=24 Identities=33% Similarity=0.567 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||+|++.|+...
T Consensus 30 e~~~liG~sGaGKSTll~~i~gl~ 53 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMIAGLE 53 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHhcCC
Confidence 458999999999999999998765
No 214
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.05 E-value=0.5 Score=44.86 Aligned_cols=22 Identities=32% Similarity=0.575 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|+..+...
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~~ 25 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLTK 25 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4899999999999999988764
No 215
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=78.99 E-value=0.45 Score=49.05 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=22.3
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+..-+-|.||+|+|||||++.|+..+
T Consensus 27 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 52 (242)
T d1mv5a_ 27 PNSIIAFAGPSGGGKSTIFSLLERFY 52 (242)
T ss_dssp TTEEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHhh
Confidence 44568999999999999999998655
No 216
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.92 E-value=0.48 Score=44.98 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~~ 28 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQS 28 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 4999999999999999988753
No 217
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=78.90 E-value=0.8 Score=44.30 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=27.9
Q ss_pred ceEEEEcC-CCChHHHHHHHHHHHh---CCcEEEEec
Q 001031 985 KGILLFGP-PGTGKTMLAKAVATEA---GANFINISM 1017 (1183)
Q Consensus 985 ~gVLL~GP-PGTGKT~LAkAIA~eL---g~pfi~I~~ 1017 (1183)
+.++++|- +|+|||+++-.+|..+ |..+..++.
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 56899999 5999999999998877 788877763
No 218
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.82 E-value=0.47 Score=49.21 Aligned_cols=26 Identities=31% Similarity=0.483 Sum_probs=22.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+..-+-|.||.|+|||||++.|+..+
T Consensus 39 ~Ge~vaivG~sGsGKSTLl~li~gl~ 64 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKSTVAALLQNLY 64 (251)
T ss_dssp TTCEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHhccc
Confidence 44569999999999999999998655
No 219
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.67 E-value=0.23 Score=49.52 Aligned_cols=26 Identities=19% Similarity=0.231 Sum_probs=23.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGA 1010 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~ 1010 (1183)
+-|.|.|+-|+||||+++.|++.+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 45899999999999999999998843
No 220
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=78.66 E-value=0.45 Score=44.56 Aligned_cols=33 Identities=33% Similarity=0.263 Sum_probs=29.6
Q ss_pred eeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 495 ILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 495 ILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
|+|.||+| -..-++||+||+.++.+.+.+|.-.
T Consensus 7 I~l~G~~G--sGKSTia~~La~~lg~~~~~~~~d~ 39 (176)
T d1zp6a1 7 LLLSGHPG--SGKSTIAEALANLPGVPKVHFHSDD 39 (176)
T ss_dssp EEEEECTT--SCHHHHHHHHHTCSSSCEEEECTTH
T ss_pred EEEECCCC--CCHHHHHHHHHHHhCCCEEEecHHH
Confidence 78999999 6899999999999999999988633
No 221
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=78.47 E-value=0.4 Score=49.60 Aligned_cols=24 Identities=25% Similarity=0.353 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||+|+|||+|++.|+...
T Consensus 32 e~~~iiG~sGsGKSTLl~~i~Gl~ 55 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCVNLLE 55 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHcCCc
Confidence 458999999999999999998765
No 222
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=78.21 E-value=0.41 Score=43.67 Aligned_cols=32 Identities=28% Similarity=0.494 Sum_probs=27.4
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
+-|.|.||+| -..-++||+||+.++.+.+-.|
T Consensus 3 k~I~l~G~~G--sGKSTvak~La~~L~~~~id~~ 34 (169)
T d1kaga_ 3 RNIFLVGPMG--AGKSTIGRQLAQQLNMEFYDSD 34 (169)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHTTCEEEEHH
T ss_pred CeEEEECCCC--CCHHHHHHHHHHHhCCCeEeec
Confidence 4599999999 6899999999999999975433
No 223
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=78.21 E-value=0.55 Score=45.14 Aligned_cols=22 Identities=27% Similarity=0.576 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|.+|+|||+|+..+.+.
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~~ 25 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVNK 25 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999988753
No 224
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=78.20 E-value=0.42 Score=49.08 Aligned_cols=24 Identities=29% Similarity=0.582 Sum_probs=21.5
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||||++.|+.-.
T Consensus 27 e~~~liGpsGaGKSTll~~l~Gl~ 50 (229)
T d3d31a2 27 EYFVILGPTGAGKTLFLELIAGFH 50 (229)
T ss_dssp CEEEEECCCTHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhcCc
Confidence 458999999999999999999765
No 225
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.15 E-value=0.55 Score=44.46 Aligned_cols=21 Identities=29% Similarity=0.575 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|++|+|||+|+..+..
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 489999999999999999875
No 226
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=78.01 E-value=0.54 Score=44.31 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|++.|.+|+|||+|+..+...
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~~ 25 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVED 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998753
No 227
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.81 E-value=0.54 Score=44.84 Aligned_cols=22 Identities=23% Similarity=0.422 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~~ 29 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQS 29 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5999999999999999988753
No 228
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.75 E-value=0.55 Score=44.39 Aligned_cols=21 Identities=29% Similarity=0.528 Sum_probs=18.8
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999998875
No 229
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=77.70 E-value=0.62 Score=48.07 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=21.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||+|+|||||.+.|+...
T Consensus 33 e~~~liGpsGaGKSTLl~~i~Gl~ 56 (239)
T d1v43a3 33 EFLVLLGPSGCGKTTTLRMIAGLE 56 (239)
T ss_dssp CEEEEECCTTSSHHHHHHHHHTSS
T ss_pred CEEEEECCCCChHHHHHHHHHcCC
Confidence 458999999999999999998766
No 230
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.59 E-value=0.57 Score=43.98 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999999875
No 231
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.53 E-value=0.6 Score=44.24 Aligned_cols=22 Identities=32% Similarity=0.495 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|+..+.+.
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~~ 29 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKDG 29 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4999999999999999988763
No 232
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=77.35 E-value=0.55 Score=51.21 Aligned_cols=37 Identities=27% Similarity=0.214 Sum_probs=32.5
Q ss_pred CCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecC
Q 001031 490 TMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSL 528 (1183)
Q Consensus 490 ~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~ 528 (1183)
|-.+-|||.|||| ....+||+|||++++.+++-++.+
T Consensus 152 ~~~~~~~~~g~~~--~gk~~~~~~~~~~~~~~~i~in~s 188 (362)
T d1svma_ 152 PKKRYWLFKGPID--SGKTTLAAALLELCGGKALNVNLP 188 (362)
T ss_dssp TTCCEEEEECSTT--SSHHHHHHHHHHHHCCEEECCSSC
T ss_pred CCcCeEEEECCCC--CCHHHHHHHHHHHcCCCEEEEECc
Confidence 4557899999999 789999999999999999887754
No 233
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.35 E-value=0.58 Score=44.13 Aligned_cols=23 Identities=22% Similarity=0.345 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
..|+|.|++|+|||+|+..+...
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~~ 27 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVEG 27 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 46999999999999999998753
No 234
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=77.33 E-value=0.57 Score=47.36 Aligned_cols=21 Identities=33% Similarity=0.561 Sum_probs=18.6
Q ss_pred EEEEcCCCChHHHHHHHHHHH
Q 001031 987 ILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~e 1007 (1183)
-+|+|+.|+|||+|..||+-.
T Consensus 26 n~IvG~NGsGKStiL~Ai~~~ 46 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLLDAILVG 46 (292)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHH
Confidence 389999999999999999753
No 235
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.07 E-value=0.62 Score=44.49 Aligned_cols=23 Identities=30% Similarity=0.510 Sum_probs=20.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
-.|++.|.+|+|||+|+..+...
T Consensus 8 iKi~vvG~~~vGKTsli~~l~~~ 30 (177)
T d1x3sa1 8 LKILIIGESGVGKSSLLLRFTDD 30 (177)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCcCHHHHHHHHHhC
Confidence 35999999999999999998753
No 236
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=77.03 E-value=0.61 Score=44.61 Aligned_cols=22 Identities=32% Similarity=0.451 Sum_probs=19.5
Q ss_pred CceEEEEcCCCChHHHHHHHHH
Q 001031 984 CKGILLFGPPGTGKTMLAKAVA 1005 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA 1005 (1183)
-..|+|.|++|+|||+|...+.
T Consensus 17 ~~KI~lvG~~~vGKTsLi~~l~ 38 (182)
T d1moza_ 17 ELRILILGLDGAGKTTILYRLQ 38 (182)
T ss_dssp CEEEEEEEETTSSHHHHHHHTC
T ss_pred eEEEEEECCCCCCHHHHHHHHh
Confidence 3579999999999999999874
No 237
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.85 E-value=0.6 Score=44.30 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 7 KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 499999999999999998875
No 238
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.68 E-value=0.65 Score=44.29 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
..|+|.|.+|+|||+|+..+...
T Consensus 3 ~KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 3 KKLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 35899999999999999988764
No 239
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=76.52 E-value=0.6 Score=45.18 Aligned_cols=21 Identities=24% Similarity=0.393 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|.|.|+||+|||+|..+|.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 599999999999999999964
No 240
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=76.27 E-value=3.2 Score=43.70 Aligned_cols=24 Identities=38% Similarity=0.606 Sum_probs=21.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
..++|.|++|+|||+|+..|++..
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHH
T ss_pred CeeeEeCCCCCCHHHHHHHHHHHH
Confidence 369999999999999999998865
No 241
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=76.18 E-value=0.51 Score=48.79 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=21.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||+|+|||||++.|+...
T Consensus 32 e~~~iiG~sGsGKSTll~~i~gl~ 55 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIAGLD 55 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 469999999999999999998754
No 242
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=76.09 E-value=0.69 Score=43.65 Aligned_cols=22 Identities=23% Similarity=0.453 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+.+.
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~~ 27 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVED 27 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4899999999999999998753
No 243
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.71 E-value=0.72 Score=43.50 Aligned_cols=22 Identities=23% Similarity=0.486 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 5 KivvvG~~~vGKTsli~r~~~~ 26 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQG 26 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHcC
Confidence 4899999999999999998754
No 244
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.38 E-value=0.74 Score=43.46 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=19.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~~ 26 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVSN 26 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988754
No 245
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=74.97 E-value=0.94 Score=44.95 Aligned_cols=57 Identities=23% Similarity=0.367 Sum_probs=38.9
Q ss_pred ccccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcC-----CeEEEEe
Q 001031 452 SFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFS-----ARLLIVD 526 (1183)
Q Consensus 452 sfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~-----a~LLilD 526 (1183)
+|++|=. .++++.-|..+. +...+ +-|||+||+| ....+|||+||+++. ...+-++
T Consensus 22 ~~~diig--~~~~~~~l~~~i----~~~~~-----------~~lll~Gp~G--~GKTtla~~iak~l~~~~~~~~~~e~n 82 (231)
T d1iqpa2 22 RLDDIVG--QEHIVKRLKHYV----KTGSM-----------PHLLFAGPPG--VGKTTAALALARELFGENWRHNFLELN 82 (231)
T ss_dssp STTTCCS--CHHHHHHHHHHH----HHTCC-----------CEEEEESCTT--SSHHHHHHHHHHHHHGGGHHHHEEEEE
T ss_pred CHHHccC--cHHHHHHHHHHH----HcCCC-----------CeEEEECCCC--CcHHHHHHHHHHHHHhcccCCCeeEEe
Confidence 4666554 478888777754 22111 2399999999 799999999999764 3455454
Q ss_pred c
Q 001031 527 S 527 (1183)
Q Consensus 527 s 527 (1183)
.
T Consensus 83 ~ 83 (231)
T d1iqpa2 83 A 83 (231)
T ss_dssp T
T ss_pred c
Confidence 3
No 246
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=74.89 E-value=0.69 Score=48.10 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||+|+++|+...
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i~Gl~ 52 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCINFLE 52 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHcCc
Confidence 458999999999999999998654
No 247
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=74.82 E-value=0.27 Score=46.36 Aligned_cols=22 Identities=32% Similarity=0.347 Sum_probs=20.1
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.+|+||.|+|||++..||.-.+
T Consensus 27 tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 27 TTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHSCCSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHh
Confidence 5889999999999999998776
No 248
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.12 E-value=0.82 Score=43.83 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 7 KivviG~~~vGKTsli~~~~~~ 28 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTTN 28 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHHhC
Confidence 5999999999999999988764
No 249
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=74.05 E-value=0.69 Score=47.13 Aligned_cols=23 Identities=30% Similarity=0.430 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.+|+|+.|+|||++..||.-.+
T Consensus 25 ~~vi~G~NgsGKTtileAI~~~l 47 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLLDAILVGL 47 (369)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHH
Confidence 35899999999999999996533
No 250
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=74.03 E-value=0.85 Score=43.29 Aligned_cols=23 Identities=22% Similarity=0.380 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
-.|+|.|.+|+|||+|+..+...
T Consensus 5 ~Ki~lvG~~~vGKTsll~~~~~~ 27 (169)
T d1x1ra1 5 YKLVVVGDGGVGKSALTIQFFQK 27 (169)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHS
T ss_pred EEEEEECCCCcCHHHHHHHHHhC
Confidence 45899999999999999998763
No 251
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=73.92 E-value=0.79 Score=44.56 Aligned_cols=22 Identities=32% Similarity=0.573 Sum_probs=19.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|+..+...
T Consensus 8 KivvvG~~~vGKTsli~~l~~~ 29 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFSDD 29 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhhC
Confidence 4899999999999999988753
No 252
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.83 E-value=0.8 Score=43.60 Aligned_cols=21 Identities=38% Similarity=0.634 Sum_probs=18.9
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 5 Kv~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999998864
No 253
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=72.99 E-value=0.53 Score=48.98 Aligned_cols=26 Identities=19% Similarity=0.286 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+..-+.|.||+|+|||||++.|+...
T Consensus 43 ~Ge~vaivG~sGsGKSTLl~ll~gl~ 68 (255)
T d2hyda1 43 KGETVAFVGMSGGGKSTLINLIPRFY 68 (255)
T ss_dssp TTCEEEEECSTTSSHHHHHTTTTTSS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHhcC
Confidence 44569999999999999999997654
No 254
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.97 E-value=0.55 Score=44.70 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=9.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|+|.|.+|+|||+|+..+..
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999988764
No 255
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=72.84 E-value=3.4 Score=40.75 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=44.3
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhC----------------------------CcEEEEecCcccc---ccccchHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEAG----------------------------ANFINISMSSITS---KWFGEGEKY 1031 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eLg----------------------------~pfi~I~~s~L~s---~~~GesE~~ 1031 (1183)
|.-+|.+.|-+++|||+|+.+|...++ ..++.+......- +..|. ..+
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~~~g~~~~~~~~~~~~~~d~~~eE~~rgiTi~~~~~~~~~~~~~i~iiDtPGh-~df 80 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTYVAAAENPNVEVKDYGDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGH-ADY 80 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHHHHHHSCTTSCCCCHHHHSCSHHHHHHTCCCSCEEEEEECSSCEEEEEECCCS-GGG
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHHHhhhccCCcchhhhhhcccchHHhcCCeEEEeeEEEEEeCCeEEEEEeCCCc-hhh
Confidence 556799999999999999999964421 1112222111100 11121 345
Q ss_pred HHHHHHHHhccCCeEEEEeCCccc
Q 001031 1032 VKAVFSLASKIAPSVVFVDEVDSM 1055 (1183)
Q Consensus 1032 Ir~lF~~A~k~~PsILfIDEID~L 1055 (1183)
+..+...+....-+||+||=.+-+
T Consensus 81 ~~~~~~~~~~aD~avlVvda~~Gv 104 (204)
T d2c78a3 81 IKNMITGAAQMDGAILVVSAADGP 104 (204)
T ss_dssp HHHHHHHHTTCSSEEEEEETTTCC
T ss_pred HHHHHHHHHHCCEEEEEEECCCCC
Confidence 666677777777889999977654
No 256
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.63 E-value=3.2 Score=39.13 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.|+|.|..|+|||+|...+...-
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~~~ 26 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRIIH 26 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhCCC
Confidence 58999999999999999986553
No 257
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.31 E-value=0.91 Score=43.61 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+...
T Consensus 4 KivliG~~~vGKTsli~r~~~~ 25 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAKD 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999988764
No 258
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=71.96 E-value=3.2 Score=39.00 Aligned_cols=22 Identities=27% Similarity=0.489 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|..|+|||+|++.+...
T Consensus 4 KivllG~~~vGKTsl~~r~~~~ 25 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKII 25 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 5899999999999999987544
No 259
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=71.91 E-value=0.78 Score=47.15 Aligned_cols=24 Identities=33% Similarity=0.423 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||||.++|+..+
T Consensus 33 ei~~liGpnGaGKSTl~~~i~Gl~ 56 (240)
T d1ji0a_ 33 QIVTLIGANGAGKTTTLSAIAGLV 56 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHhCCC
Confidence 458999999999999999998765
No 260
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.76 E-value=0.95 Score=43.60 Aligned_cols=22 Identities=27% Similarity=0.375 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|.+|+|||+|+..+.+.
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~~ 32 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAND 32 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhhC
Confidence 4899999999999999988754
No 261
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=71.50 E-value=0.77 Score=47.81 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=19.7
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-+|+||.|+|||++..||+-.+
T Consensus 29 nvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 29 TAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp EEEEECTTSSSHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 3999999999999999997655
No 262
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=71.30 E-value=5.8 Score=40.24 Aligned_cols=33 Identities=27% Similarity=0.180 Sum_probs=24.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEec
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISM 1017 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~ 1017 (1183)
...||+|..|+|||.++-..+... |..++.+-.
T Consensus 77 ~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~P 112 (233)
T d2eyqa3 77 MDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVP 112 (233)
T ss_dssp CEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECS
T ss_pred cCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEcc
Confidence 578999999999999776554443 666666554
No 263
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=71.11 E-value=0.83 Score=43.18 Aligned_cols=31 Identities=32% Similarity=0.477 Sum_probs=28.0
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLi 524 (1183)
.|||.|.||+| -..-+++|+||+.++.+++=
T Consensus 1 ~p~IvliG~~G--~GKSTig~~La~~l~~~fiD 31 (165)
T d2iyva1 1 APKAVLVGLPG--SGKSTIGRRLAKALGVGLLD 31 (165)
T ss_dssp CCSEEEECSTT--SSHHHHHHHHHHHHTCCEEE
T ss_pred CCcEEEECCCC--CCHHHHHHHHHHHhCCCeEe
Confidence 48999999999 68999999999999999763
No 264
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=70.92 E-value=0.98 Score=42.53 Aligned_cols=21 Identities=29% Similarity=0.439 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
-|+|.|.||+|||+|..++.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 489999999999999999975
No 265
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.76 E-value=1 Score=43.48 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.|+|.|++|+|||+|+..+...
T Consensus 5 KvvllG~~~vGKTSli~r~~~~ 26 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTTN 26 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 5899999999999999887654
No 266
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=70.51 E-value=15 Score=37.96 Aligned_cols=24 Identities=38% Similarity=0.535 Sum_probs=21.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
..++|+|++|+|||+|+..+++..
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHHH
Confidence 359999999999999999998764
No 267
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=70.42 E-value=6.7 Score=40.76 Aligned_cols=25 Identities=20% Similarity=0.226 Sum_probs=22.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
++|-|.|..|+|||+|+.++....|
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 6899999999999999999976653
No 268
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=70.05 E-value=0.67 Score=43.56 Aligned_cols=21 Identities=14% Similarity=0.273 Sum_probs=19.1
Q ss_pred ceEEEEcCCCChHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVA 1005 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA 1005 (1183)
..|.|.|.|++|||+|..+|.
T Consensus 17 ~~I~lvG~~NvGKSSL~n~L~ 37 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSALNTLT 37 (188)
T ss_dssp EEEEEEECTTSSHHHHHTTTC
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 469999999999999999884
No 269
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=69.94 E-value=16 Score=34.00 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=22.3
Q ss_pred EEEEcCCCChHHH-HHHHHH--HHhCCcEEEEec
Q 001031 987 ILLFGPPGTGKTM-LAKAVA--TEAGANFINISM 1017 (1183)
Q Consensus 987 VLL~GPPGTGKT~-LAkAIA--~eLg~pfi~I~~ 1017 (1183)
=|++||-.+|||+ |.+.+- ...|..++.++.
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~ 43 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKP 43 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcCCcEEEEEe
Confidence 4889999999999 666663 334777766653
No 270
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=69.42 E-value=1.1 Score=45.90 Aligned_cols=24 Identities=33% Similarity=0.459 Sum_probs=21.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||+|.+.|+..+
T Consensus 29 ei~glvG~nGaGKSTLl~~l~G~~ 52 (238)
T d1vpla_ 29 EIFGLIGPNGAGKTTTLRIISTLI 52 (238)
T ss_dssp CEEEEECCTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCCHHHHHHHHhcCC
Confidence 447799999999999999998765
No 271
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=68.75 E-value=2.1 Score=43.36 Aligned_cols=32 Identities=34% Similarity=0.505 Sum_probs=26.6
Q ss_pred EEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
|++.|.=|+|||+++..+|..+ |..+..+++.
T Consensus 23 ii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 23 IMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 7888999999999988887766 7788877764
No 272
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=68.69 E-value=1 Score=46.62 Aligned_cols=24 Identities=29% Similarity=0.530 Sum_probs=21.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
.-+-|.||.|+|||+|++.|+..+
T Consensus 31 ei~~liG~nGaGKSTLl~~i~Gl~ 54 (254)
T d1g6ha_ 31 DVTLIIGPNGSGKSTLINVITGFL 54 (254)
T ss_dssp CEEEEECSTTSSHHHHHHHHTTSS
T ss_pred CEEEEECCCCCcHHHHHHHHHCCC
Confidence 458999999999999999998654
No 273
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=67.88 E-value=1 Score=43.05 Aligned_cols=20 Identities=35% Similarity=0.532 Sum_probs=18.2
Q ss_pred eEEEEcCCCChHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVA 1005 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA 1005 (1183)
.|-|.|+||+|||+|..++.
T Consensus 3 ~VaiiG~~nvGKSSLin~L~ 22 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVS 22 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSE
T ss_pred eEEEECCCCCCHHHHHHHHh
Confidence 48899999999999999985
No 274
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=67.73 E-value=0.98 Score=43.01 Aligned_cols=21 Identities=33% Similarity=0.504 Sum_probs=18.7
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|.|.|.||+|||+|+.++..
T Consensus 3 ~VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp SEEEECCGGGCHHHHHHHHCS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 488999999999999999853
No 275
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.64 E-value=1.7 Score=42.66 Aligned_cols=38 Identities=16% Similarity=0.153 Sum_probs=28.4
Q ss_pred CEEEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEecc
Q 001031 705 PLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHT 745 (1183)
Q Consensus 705 P~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~ 745 (1183)
.-||+|+|+|++. .+..+.+...++.-....++|.+++
T Consensus 109 ~~viiiDe~d~l~---~~~~~~l~~~~~~~~~~~~~i~~~~ 146 (237)
T d1sxjd2 109 YKIIILDEADSMT---ADAQSALRRTMETYSGVTRFCLICN 146 (237)
T ss_dssp CEEEEETTGGGSC---HHHHHHHHHHHHHTTTTEEEEEEES
T ss_pred ceEEEEecccccC---HHHHHHHhhcccccccccccccccc
Confidence 3489999999953 3455567777777788888888877
No 276
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=67.57 E-value=1.4 Score=41.83 Aligned_cols=23 Identities=26% Similarity=0.501 Sum_probs=20.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
-.|.|.|.+|+|||+|..++...
T Consensus 9 ~kV~iiG~~~~GKSTLin~l~~~ 31 (186)
T d1mkya2 9 IKVAIVGRPNVGKSTLFNAILNK 31 (186)
T ss_dssp EEEEEECSTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCCHHHHHHHHHCC
Confidence 46899999999999999999753
No 277
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=67.55 E-value=4.5 Score=38.40 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.|-|.|.|++|||+|..++..
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 588999999999999999974
No 278
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=67.26 E-value=1.1 Score=42.42 Aligned_cols=32 Identities=38% Similarity=0.413 Sum_probs=28.1
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
+.|.|.||+| -..-+++|+||++++.+++=+|
T Consensus 1 k~I~liG~~G--sGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMG--SGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTT--SCHHHHHHHHHHHHTCEEEEHH
T ss_pred CcEEEECCCC--CCHHHHHHHHHHHhCCCEEecC
Confidence 3699999999 6899999999999999987544
No 279
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=67.09 E-value=0.96 Score=46.06 Aligned_cols=23 Identities=35% Similarity=0.517 Sum_probs=20.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.-+-|.||.|+|||+|.+.|+..
T Consensus 26 ei~~iiG~nGaGKSTLl~~l~Gl 48 (231)
T d1l7vc_ 26 EILHLVGPNGAGKSTLLARMAGM 48 (231)
T ss_dssp CEEECBCCTTSSHHHHHHHHHTS
T ss_pred CEEEEECCCCCcHHHHHHHHhCC
Confidence 45899999999999999999863
No 280
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=67.07 E-value=1.2 Score=41.50 Aligned_cols=33 Identities=24% Similarity=0.243 Sum_probs=28.5
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs 527 (1183)
+-|+|.||+| -..-++||+||++++++.+..|-
T Consensus 7 ~iivl~G~~G--sGKsT~a~~La~~l~~~~~~~d~ 39 (171)
T d1knqa_ 7 HIYVLMGVSG--SGKSAVASEVAHQLHAAFLDGDF 39 (171)
T ss_dssp EEEEEECSTT--SCHHHHHHHHHHHHTCEEEEGGG
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHhCCCeechhh
Confidence 3477899999 68999999999999999877664
No 281
>d1vioa2 d.66.1.5 (A:0-57) Pseudouridine synthase RsuA N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=65.72 E-value=1.6 Score=34.92 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=21.8
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEE
Q 001031 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1183)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f 223 (1183)
.|.|+|||+.+.+. .+.++.||+|.|
T Consensus 25 ~g~V~Vng~~v~~~-~~~v~~~d~I~~ 50 (58)
T d1vioa2 25 QSAVKINGEIVKSG-SVQISQEDEIYF 50 (58)
T ss_dssp TTCEEETTEECCCT-TCEECTTSCEEE
T ss_pred cCeEEECCEEeCCC-CCCCCCCCEEEE
Confidence 46799999999986 466788999988
No 282
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=65.35 E-value=1.7 Score=39.93 Aligned_cols=28 Identities=29% Similarity=0.476 Sum_probs=24.4
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeE
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARL 522 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~L 522 (1183)
+-|+|.||+| -..-++||+||++++-..
T Consensus 3 klI~i~G~~G--sGKTTva~~L~~~~~~~~ 30 (176)
T d2bdta1 3 KLYIITGPAG--VGKSTTCKRLAAQLDNSA 30 (176)
T ss_dssp EEEEEECSTT--SSHHHHHHHHHHHSSSEE
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHcCCCE
Confidence 4599999999 699999999999998653
No 283
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.78 E-value=3.1 Score=38.61 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=22.0
Q ss_pred EEEEcCCCChHHH-HHHHHHHH--hCCcEEEEec
Q 001031 987 ILLFGPPGTGKTM-LAKAVATE--AGANFINISM 1017 (1183)
Q Consensus 987 VLL~GPPGTGKT~-LAkAIA~e--Lg~pfi~I~~ 1017 (1183)
-|++||-.+|||+ |.+.+-+. .|..++.+..
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ikp 38 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKY 38 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEec
Confidence 4789999999999 66655433 3666666653
No 284
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.22 E-value=2 Score=41.15 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=21.2
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
|--.|++.|.+|+|||+|+..+...
T Consensus 4 p~~ki~vlG~~~vGKTsLi~~~~~~ 28 (175)
T d2bmja1 4 PELRLGVLGDARSGKSSLIHRFLTG 28 (175)
T ss_dssp CEEEEEEECCTTTTHHHHHHHHHHS
T ss_pred CcEEEEEECCCCCCHHHHHHHHHhC
Confidence 3356999999999999999988764
No 285
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=62.63 E-value=0.73 Score=42.79 Aligned_cols=27 Identities=22% Similarity=0.315 Sum_probs=23.6
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeE
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARL 522 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~L 522 (1183)
-|+|+|++| -..-++||+||+.++++.
T Consensus 8 ~I~l~G~~G--sGKTTia~~La~~L~~~~ 34 (183)
T d1m8pa3 8 TIFLTGYMN--SGKDAIARALQVTLNQQG 34 (183)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHHHHC
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHhhcC
Confidence 389999999 689999999999997754
No 286
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=62.49 E-value=3.1 Score=42.07 Aligned_cols=34 Identities=15% Similarity=0.453 Sum_probs=28.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
+.|-++|.=|+|||++|-.+|..+ |..+.-+|+.
T Consensus 2 r~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 2 RQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 357789999999999999888776 7888888764
No 287
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.27 E-value=2 Score=42.28 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=27.9
Q ss_pred EEEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccC
Q 001031 706 LIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1183)
Q Consensus 706 ~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~~ 746 (1183)
-||+|+|+|.+... ....+...++..+..+++|..++.
T Consensus 103 kviiiDe~d~~~~~---~~~~ll~~~e~~~~~~~~i~~~~~ 140 (224)
T d1sxjb2 103 KIVILDEADSMTAG---AQQALRRTMELYSNSTRFAFACNQ 140 (224)
T ss_dssp EEEEEESGGGSCHH---HHHTTHHHHHHTTTTEEEEEEESC
T ss_pred EEEEEecccccchh---HHHHHhhhccccccceeeeeccCc
Confidence 48889999984433 334467788888888888888883
No 288
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=62.10 E-value=2.9 Score=41.19 Aligned_cols=53 Identities=17% Similarity=0.128 Sum_probs=35.4
Q ss_pred ccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcC
Q 001031 454 ESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFS 519 (1183)
Q Consensus 454 d~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~ 519 (1183)
++|++= |.....|..+--.+++.+ ....+.|||.||+| ....++||+||+++.
T Consensus 16 ~~l~~R--e~ei~~l~~~l~~~l~~~---------~~~~~~lll~GppG--tGKT~l~~~l~~~l~ 68 (276)
T d1fnna2 16 KRLPHR--EQQLQQLDILLGNWLRNP---------GHHYPRATLLGRPG--TGKTVTLRKLWELYK 68 (276)
T ss_dssp SCCTTC--HHHHHHHHHHHHHHHHST---------TSSCCEEEEECCTT--SSHHHHHHHHHHHHT
T ss_pred CCCCCH--HHHHHHHHHHHHHHHhCC---------CCCCCceEEECCCC--CCHHHHHHHHHHHHh
Confidence 445543 444455554444333332 24567899999999 799999999999864
No 289
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=62.07 E-value=1.9 Score=45.75 Aligned_cols=23 Identities=30% Similarity=0.611 Sum_probs=19.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHhC
Q 001031 987 ILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
-+|+||.|+|||++..||.-.+|
T Consensus 28 ~~i~G~NGsGKS~ileAi~~~lg 50 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMMDAISFVLG 50 (427)
T ss_dssp EEEECSTTSSHHHHHHHHHHHTT
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 38999999999999999975554
No 290
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=62.03 E-value=1.7 Score=41.07 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=28.3
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
++.|.|.||+| -..-+++|.||+++|.+++=.|
T Consensus 2 ~~~Iil~G~~G--sGKSTia~~LA~~Lg~~~id~D 34 (170)
T d1e6ca_ 2 TEPIFMVGARG--CGMTTVGRELARALGYEFVDTD 34 (170)
T ss_dssp CCCEEEESCTT--SSHHHHHHHHHHHHTCEEEEHH
T ss_pred CCCEEEECCCC--CCHHHHHHHHHHHhCCCEEehh
Confidence 46799999999 6899999999999999976333
No 291
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=61.59 E-value=1.2 Score=45.64 Aligned_cols=22 Identities=27% Similarity=0.478 Sum_probs=19.2
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-+|+||.|+|||++..||+-.+
T Consensus 27 nvlvG~NgsGKS~iL~Ai~~~l 48 (308)
T d1e69a_ 27 TAIVGPNGSGKSNIIDAIKWVF 48 (308)
T ss_dssp EEEECCTTTCSTHHHHHHHHTS
T ss_pred EEEECCCCCcHHHHHHHHHHHh
Confidence 5899999999999999996544
No 292
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=61.55 E-value=1.8 Score=40.85 Aligned_cols=30 Identities=17% Similarity=0.261 Sum_probs=26.1
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEEE
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIV 525 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LLil 525 (1183)
||+|.|||| -..-++||.||+++|...+-.
T Consensus 2 ~I~i~G~pG--SGKsT~a~~La~~~~~~~i~~ 31 (182)
T d1zina1 2 NLVLMGLPG--AGKGTQAEKIVAAYGIPHIST 31 (182)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHCCCEEEH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHCCceech
Confidence 699999999 588999999999998886643
No 293
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=61.23 E-value=1.6 Score=46.91 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=25.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhC--CcEEEE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAG--ANFINI 1015 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg--~pfi~I 1015 (1183)
..|.|.|+-|+|||++++.+++.++ ..++.+
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~~~~~v~~~ 39 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGGCSSCEEEE
T ss_pred EEEEEECCccCCHHHHHHHHHHHhccCCCeEEE
Confidence 4689999999999999999999884 344444
No 294
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.73 E-value=1.1 Score=42.55 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=26.2
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
.-|+|+||+| -..-+|||+||++++.+..-.|
T Consensus 20 ~vI~L~G~pG--SGKTTiAk~La~~l~~~~~~~~ 51 (195)
T d1x6va3 20 CTVWLTGLSG--AGKTTVSMALEEYLVCHGIPCY 51 (195)
T ss_dssp EEEEEESSCH--HHHHHHHHHHHHHHHHTTCCEE
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHHHhcCCCcc
Confidence 3699999999 6899999999999976544433
No 295
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=60.41 E-value=2.2 Score=38.35 Aligned_cols=31 Identities=19% Similarity=0.296 Sum_probs=25.0
Q ss_pred CCceEEEcCeecCCCceEEeeCCCEEEEccCCC
Q 001031 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGK 228 (1183)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~ 228 (1183)
.+|.|.|||+.+ | ....++.||.|.|...+.
T Consensus 28 ~~G~V~vNg~~v-K-ps~~vk~GDvI~i~~~~~ 58 (104)
T d1dm9a_ 28 EGGKVHYNGQRS-K-PSKIVELNATLTLRQGND 58 (104)
T ss_dssp HTTCEEETTEEC-C-TTCBCCTTCEEEEEETTE
T ss_pred HcCCeeeCCeec-c-ccccCCCCCEEEEEeCCe
Confidence 357899999987 4 357889999999977754
No 296
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=59.87 E-value=2.3 Score=43.25 Aligned_cols=28 Identities=25% Similarity=0.267 Sum_probs=22.1
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcE
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANF 1012 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pf 1012 (1183)
+..+|.|++|+|||+|..++........
T Consensus 96 kt~~~~G~SGVGKSTLiN~L~~~~~~~T 123 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAINPGLKLRV 123 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHHSTTCCCC-
T ss_pred CeEEEECCCCCCHHHHHHhhcchhhhhc
Confidence 4678999999999999999976554433
No 297
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=59.04 E-value=3.2 Score=41.09 Aligned_cols=39 Identities=31% Similarity=0.254 Sum_probs=26.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcEEEEecCccccc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISMSSITSK 1023 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL-----g~pfi~I~~s~L~s~ 1023 (1183)
.|.||.=++|+|||..+-+++..+ ..+++.+....+...
T Consensus 32 ~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~~ 75 (230)
T d1z63a1 32 FGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLKN 75 (230)
T ss_dssp CCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHHH
T ss_pred CCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecchhhhhH
Confidence 478998999999999888776654 134544544444333
No 298
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=59.02 E-value=11 Score=37.35 Aligned_cols=40 Identities=18% Similarity=0.306 Sum_probs=32.9
Q ss_pred CCEEEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccC
Q 001031 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1183)
Q Consensus 704 ~P~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~~ 746 (1183)
+.-||+|+|+|++ +.+..+.|...|+..++++++|+++|+
T Consensus 115 ~~kviiIde~d~l---~~~~q~~Llk~lE~~~~~~~~il~tn~ 154 (239)
T d1njfa_ 115 RFKVYLIDEVHML---SRHSFNALLKTLEEPPEHVKFLLATTD 154 (239)
T ss_dssp SSEEEEEETGGGS---CHHHHHHHHHHHHSCCTTEEEEEEESC
T ss_pred CCEEEEEECcccC---CHHHHHHHHHHHhcCCCCeEEEEEcCC
Confidence 4569999999994 355566788999998999999999994
No 299
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.99 E-value=2.6 Score=42.05 Aligned_cols=55 Identities=20% Similarity=0.292 Sum_probs=34.5
Q ss_pred CCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHHH
Q 001031 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTML 1000 (1183)
Q Consensus 943 e~~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l--~kP~~gVLL~GPPGTGKT~L 1000 (1183)
++..+|++++-.+.+.+.|.+.= +.++....+..+ ....+.+++..|+|+|||..
T Consensus 9 e~i~sF~~l~L~~~l~~~L~~~g---~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTla 65 (218)
T d2g9na1 9 EIVDSFDDMNLSESLLRGIYAYG---FEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTAT 65 (218)
T ss_dssp CCCCCGGGSCCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHH
T ss_pred CccCCHHHCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhh
Confidence 45568999988888888886531 222222211100 01225799999999999983
No 300
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.47 E-value=2.2 Score=42.79 Aligned_cols=23 Identities=39% Similarity=0.462 Sum_probs=20.5
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.+|.|.-|+|||||.+.+.+..
T Consensus 5 v~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEEeeCCCCCHHHHHHHHHhcC
Confidence 47999999999999999998764
No 301
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=55.91 E-value=2.9 Score=44.28 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=49.3
Q ss_pred HHHHHhhcccCCCccccccccccccchhhHHHHHHhhhhhhccccccccccCCCC-CCCC--ceeecCCCCchHHHHHHH
Q 001031 435 FKDSLQEGILGPENIEVSFESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLP-TMCP--RILLSGPAGSEIYQETLA 511 (1183)
Q Consensus 435 ~k~~l~~~i~~~~~~~vsfd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~-~~s~--rILLsgp~GsE~Yqe~La 511 (1183)
.++.|++.|+ |+ ++.+..+..+..-|. . .|. +..| -|||.||+| .....||
T Consensus 17 l~~~L~~~v~-GQ--------------~~ai~~v~~~i~~~~----~-----~l~~~~kp~~~~lf~Gp~G--~GKt~la 70 (315)
T d1qvra3 17 LEEELHKRVV-GQ--------------DEAIRAVADAIRRAR----A-----GLKDPNRPIGSFLFLGPTG--VGKTELA 70 (315)
T ss_dssp HHHHHHHHSC-SC--------------HHHHHHHHHHHHHHG----G-----GCSCSSSCSEEEEEBSCSS--SSHHHHH
T ss_pred HHHHhcCeEe-CH--------------HHHHHHHHHHHHHHh----c-----CCCCCCCCceEEEEECCCc--chHHHHH
Confidence 6778888887 32 556666655544221 1 121 2222 489999999 7889999
Q ss_pred HHHHhhc---CCeEEEEecCCCCC
Q 001031 512 KALAKHF---SARLLIVDSLLLPG 532 (1183)
Q Consensus 512 KALA~~f---~a~LLilDs~~~~g 532 (1183)
|+||+.+ +.+++-+|.+.+..
T Consensus 71 k~la~~l~~~~~~~~~~~~~~~~~ 94 (315)
T d1qvra3 71 KTLAATLFDTEEAMIRIDMTEYME 94 (315)
T ss_dssp HHHHHHHHSSGGGEEEECTTTCCS
T ss_pred HHHHHHhcCCCcceEEEecccccc
Confidence 9999998 88999999866544
No 302
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=55.89 E-value=18 Score=35.07 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=40.4
Q ss_pred HHHHHHHHhhccC-CCCEEEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccC
Q 001031 690 INELFEVALNESK-SSPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1183)
Q Consensus 690 ~~~l~evl~s~~~-~~P~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~~ 746 (1183)
+..|.+.+...+. .+.-|+.|+|+|.+ +.+.-+.+.+.||.-+.++++|..++.
T Consensus 93 ir~l~~~~~~~~~~~~~kviIide~d~l---~~~a~n~Llk~lEep~~~~~fIl~t~~ 147 (207)
T d1a5ta2 93 VREVTEKLNEHARLGGAKVVWVTDAALL---TDAAANALLKTLEEPPAETWFFLATRE 147 (207)
T ss_dssp HHHHHHHTTSCCTTSSCEEEEESCGGGB---CHHHHHHHHHHHTSCCTTEEEEEEESC
T ss_pred hhHHhhhhhhccccCccceEEechhhhh---hhhhhHHHHHHHHhhcccceeeeeecC
Confidence 4555665544332 35679999999993 355677889999999999999999883
No 303
>d1whha_ b.34.10.1 (A:) CLIP170-related 59kda protein CLIPR-59 (1500005P14Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=54.85 E-value=11 Score=33.64 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=24.4
Q ss_pred ceeeeecCCCCCCCCCC------CCCCCCCCccccccccc
Q 001031 643 KIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASSLR 676 (1183)
Q Consensus 643 kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~~~ 676 (1183)
-|||-||.|..+ +|.. =.|...||-|+..+.+.
T Consensus 55 ~~GVEld~p~Gk-ndGt~~G~rYF~C~p~~GiFv~~~~v~ 93 (102)
T d1whha_ 55 WYGIELDQPTGK-HDGSVFGVRYFTCAPRHGVFAPASRIQ 93 (102)
T ss_dssp EEEEECSSSCCS-SSSEETTEECSCCCTTTEEEECGGGEE
T ss_pred EEEEEeCCCCCC-CCCEECCEEEEecCCCcEEEeCHHHce
Confidence 489999998643 3332 57999999998887665
No 304
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=54.33 E-value=2.2 Score=45.75 Aligned_cols=25 Identities=32% Similarity=0.305 Sum_probs=22.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCC
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGA 1010 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~ 1010 (1183)
.|.|.|+-|+|||++++.+++.+..
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 5899999999999999999998853
No 305
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.69 E-value=4 Score=40.43 Aligned_cols=54 Identities=22% Similarity=0.262 Sum_probs=33.5
Q ss_pred CCCCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001031 943 DIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1183)
Q Consensus 943 e~~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l--~kP~~gVLL~GPPGTGKT~ 999 (1183)
++..+|++++-.+++.+.|.+.- +.++....+..+ ....+.+++..|+|+|||+
T Consensus 7 ~~~~sF~~l~l~~~l~~~L~~~g---~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~ 62 (212)
T d1qdea_ 7 KVVYKFDDMELDENLLRGVFGYG---FEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTG 62 (212)
T ss_dssp CCCCCGGGGTCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred ccccChhhCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHcCCCEEeecccccchhh
Confidence 44568999987788888886532 222211111100 0122579999999999998
No 306
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=53.69 E-value=11 Score=41.41 Aligned_cols=56 Identities=21% Similarity=0.265 Sum_probs=41.6
Q ss_pred cccccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecC
Q 001031 948 FDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1018 (1183)
Q Consensus 948 fdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s 1018 (1183)
|.--|-+..+++.|.+.+.. ..+..+|.|-+|+|||+++.++++..+.|++.+...
T Consensus 10 ~~p~gDQP~aI~~l~~~l~~---------------g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n 65 (413)
T d1t5la1 10 YEPQGDQPQAIAKLVDGLRR---------------GVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHN 65 (413)
T ss_dssp SCCCTTHHHHHHHHHHHHHH---------------TCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCCCCCCHHHHHHHHHHHhc---------------CCCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCC
Confidence 33445556666666665531 124689999999999999999999999999888654
No 307
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=52.53 E-value=2.3 Score=41.69 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=31.5
Q ss_pred CCEEEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEecc
Q 001031 704 SPLIVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHT 745 (1183)
Q Consensus 704 ~P~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~ 745 (1183)
+.-||+|+|+|.+ +.+....+...|+..+.++++|.++|
T Consensus 99 ~~kiiiiDe~d~~---~~~~~~~Ll~~le~~~~~~~~~~~~~ 137 (227)
T d1sxjc2 99 GFKLIILDEADAM---TNAAQNALRRVIERYTKNTRFCVLAN 137 (227)
T ss_dssp SCEEEEETTGGGS---CHHHHHHHHHHHHHTTTTEEEEEEES
T ss_pred CeEEEEEeccccc---hhhHHHHHHHHhhhcccceeeccccC
Confidence 4459999999984 34456678889999999999998888
No 308
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.77 E-value=3 Score=40.85 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=28.1
Q ss_pred CcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001031 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1183)
Q Consensus 947 tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l--~kP~~gVLL~GPPGTGKT~ 999 (1183)
+|++++-.+.+.+.|.+.= +.+|....+..+ .-..+.+++.+|+|+|||+
T Consensus 2 sF~~l~L~~~l~~~L~~~g---~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTl 53 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEAG---FEKPSPIQEEAIPVAITGRDILARAKNGTGKTA 53 (206)
T ss_dssp CGGGGCCCHHHHHHHHHTT---CCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHH
T ss_pred ChHHcCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHcCCCEEEecCCcchhhh
Confidence 5777776677777776531 111111111000 0012579999999999995
No 309
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=51.22 E-value=6.8 Score=37.95 Aligned_cols=31 Identities=23% Similarity=0.377 Sum_probs=24.7
Q ss_pred EEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 988 LLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 988 LL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
+..|..|+|||++|..+|..+ |..+..+++.
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 344889999999999988776 7788887753
No 310
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=50.92 E-value=6.1 Score=40.25 Aligned_cols=33 Identities=15% Similarity=0.379 Sum_probs=26.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 986 GILLFGPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
.|.++|.=|+|||+++..+|..+ |..+.-+++.
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~D 39 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 46779999999999888777655 8888877763
No 311
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=50.69 E-value=3.5 Score=41.01 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=21.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh---CCcEEEEe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA---GANFINIS 1016 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL---g~pfi~I~ 1016 (1183)
+.+++.+|+|+|||..+-..+... +..++.+.
T Consensus 59 ~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~ 93 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIF 93 (237)
T ss_dssp CCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEe
Confidence 579999999999998655444332 44444444
No 312
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=50.02 E-value=7.4 Score=37.66 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=25.6
Q ss_pred EEEE-cCCCChHHHHHHHHHHHh---CCcEEEEecC
Q 001031 987 ILLF-GPPGTGKTMLAKAVATEA---GANFINISMS 1018 (1183)
Q Consensus 987 VLL~-GPPGTGKT~LAkAIA~eL---g~pfi~I~~s 1018 (1183)
|-++ +.-|+|||+++..+|..+ |.++..+++.
T Consensus 5 Iav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 5 ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 5556 668999999999998776 7888888753
No 313
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=49.93 E-value=2.8 Score=44.84 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=19.8
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCC
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGA 1010 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~ 1010 (1183)
.|.|.|+-|+|||++++.+++.++.
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC----
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCC
Confidence 4889999999999999999988743
No 314
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=49.92 E-value=2.2 Score=43.51 Aligned_cols=27 Identities=33% Similarity=0.553 Sum_probs=19.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCc
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGAN 1011 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~p 1011 (1183)
+..+|.|++|+|||+|..++.......
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L~~~~~~~ 124 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAISPELGLR 124 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHHCC-----
T ss_pred ceEEEECCCCccHHHHHHhhccHhHhh
Confidence 356788999999999999997655443
No 315
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=48.93 E-value=5.1 Score=36.82 Aligned_cols=28 Identities=21% Similarity=0.387 Sum_probs=24.3
Q ss_pred CCCceeecCCCCchHHHHHHHHHHHhhcCC
Q 001031 491 MCPRILLSGPAGSEIYQETLAKALAKHFSA 520 (1183)
Q Consensus 491 ~s~rILLsgp~GsE~Yqe~LaKALA~~f~a 520 (1183)
-.-.|+|+||+| -..-+++|+||+.|+.
T Consensus 4 k~~~I~i~G~~G--sGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 4 KGINILITGTPG--TGKTSMAEMIAAELDG 31 (174)
T ss_dssp SSCEEEEECSTT--SSHHHHHHHHHHHSTT
T ss_pred CCCEEEEEeCCC--CCHHHHHHHHHHHhCC
Confidence 345699999999 6899999999999974
No 316
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=47.93 E-value=4.1 Score=39.17 Aligned_cols=36 Identities=36% Similarity=0.502 Sum_probs=29.1
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCCCC
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLLP 531 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~~ 531 (1183)
.|=|.+.|||| -..-++||.||++||-.. |++-+|+
T Consensus 3 ~piI~I~GppG--SGKgT~ak~La~~~gl~~--iStGdLl 38 (225)
T d1ckea_ 3 APVITIDGPSG--AGKGTLCKAMAEALQWHL--LDSGAIY 38 (225)
T ss_dssp SCEEEEECCTT--SSHHHHHHHHHHHHTCEE--EEHHHHH
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHHhCCcE--ECHHHHH
Confidence 45699999999 589999999999998775 5555543
No 317
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=46.69 E-value=4.6 Score=38.70 Aligned_cols=34 Identities=12% Similarity=0.144 Sum_probs=27.2
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCC
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLL 529 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~ 529 (1183)
++-|+|.|||| -..-++||.||+++|... +|+.+
T Consensus 8 ~~iI~l~G~pG--SGKsT~a~~La~~~g~~~--is~g~ 41 (194)
T d3adka_ 8 SKIIFVVGGPG--SGKGTQCEKIVQKYGYTH--LSTGD 41 (194)
T ss_dssp SCEEEEEECTT--SSHHHHHHHHHHHTCCEE--EEHHH
T ss_pred CcEEEEECCCC--CCHHHHHHHHHHHhCCee--EeccH
Confidence 35699999999 588999999999998765 45433
No 318
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=46.63 E-value=4.7 Score=38.94 Aligned_cols=29 Identities=28% Similarity=0.447 Sum_probs=25.6
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 523 (1183)
-||+|.|||| -..-++|+.||+++|...+
T Consensus 7 mrIiliG~PG--SGKtT~a~~La~~~g~~~i 35 (189)
T d2ak3a1 7 LRAAIMGAPG--SGKGTVSSRITKHFELKHL 35 (189)
T ss_dssp CEEEEECCTT--SSHHHHHHHHHHHBCCEEE
T ss_pred eeEEEECCCC--CCHHHHHHHHHHHHCCeEE
Confidence 4899999999 5899999999999997654
No 319
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.31 E-value=3.8 Score=40.30 Aligned_cols=50 Identities=16% Similarity=0.161 Sum_probs=28.5
Q ss_pred CcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001031 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1183)
Q Consensus 947 tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l--~kP~~gVLL~GPPGTGKT~ 999 (1183)
.|+|++-.+++.+.|.+. - +.+|.......+ ....+.+++..|+|+|||+
T Consensus 2 ~F~dl~L~~~l~~~l~~~-g--~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTl 53 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDC-G--FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 53 (207)
T ss_dssp CSTTSCCCHHHHHHHHHT-T--CCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHH
T ss_pred CccccCcCHHHHHHHHHC-C--CCCCCHHHHHHHHHHHcCCCeEEEecccccccc
Confidence 577777677777766653 1 122211111000 0112579999999999987
No 320
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.09 E-value=4 Score=37.40 Aligned_cols=26 Identities=23% Similarity=0.507 Sum_probs=22.4
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcC
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFS 519 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~ 519 (1183)
++-|+|.|||| ...-+|++++|..+.
T Consensus 1 ~k~v~ItG~~G--tGKTtl~~~i~~~l~ 26 (189)
T d2i3ba1 1 ARHVFLTGPPG--VGKTTLIHKASEVLK 26 (189)
T ss_dssp CCCEEEESCCS--SCHHHHHHHHHHHHH
T ss_pred CcEEEEECCCC--CcHHHHHHHHHHHHH
Confidence 36799999999 789999999998873
No 321
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=46.05 E-value=3.8 Score=39.09 Aligned_cols=29 Identities=10% Similarity=0.264 Sum_probs=25.8
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 523 (1183)
-+|+|.||+| -..-++|+.||++++.+.+
T Consensus 4 m~I~i~GppG--sGKsT~a~~La~~~~~~~i 32 (189)
T d1zaka1 4 LKVMISGAPA--SGKGTQCELIKTKYQLAHI 32 (189)
T ss_dssp CCEEEEESTT--SSHHHHHHHHHHHHCCEEC
T ss_pred eEEEEECCCC--CCHHHHHHHHHHHHCCcEE
Confidence 4799999999 5889999999999988864
No 322
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=45.96 E-value=5 Score=38.33 Aligned_cols=32 Identities=25% Similarity=0.271 Sum_probs=27.0
Q ss_pred CCCCceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001031 490 TMCPRILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1183)
Q Consensus 490 ~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 523 (1183)
+.-+.|+|.|||| -..-++||.||++||...+
T Consensus 6 ~~~~iI~i~GppG--SGKsT~a~~La~~~g~~~i 37 (196)
T d1ukza_ 6 DQVSVIFVLGGPG--AGKGTQCEKLVKDYSFVHL 37 (196)
T ss_dssp TTCEEEEEECSTT--SSHHHHHHHHHHHSSCEEE
T ss_pred CCCcEEEEECCCC--CCHHHHHHHHHHHhCCeEE
Confidence 3456899999999 5899999999999987654
No 323
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=45.52 E-value=5.9 Score=42.47 Aligned_cols=23 Identities=30% Similarity=0.306 Sum_probs=17.6
Q ss_pred eEEEEcCCCChHHH-HHHHHHHHh
Q 001031 986 GILLFGPPGTGKTM-LAKAVATEA 1008 (1183)
Q Consensus 986 gVLL~GPPGTGKT~-LAkAIA~eL 1008 (1183)
.+|+.+.+|||||+ |+..++..+
T Consensus 18 ~~lv~A~AGsGKT~~l~~r~~~ll 41 (485)
T d1w36b1 18 ERLIEASAGTGKTFTIAALYLRLL 41 (485)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CeEEEEcCchHHHHHHHHHHHHHH
Confidence 48889999999998 455565554
No 324
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=45.46 E-value=5.5 Score=37.85 Aligned_cols=32 Identities=34% Similarity=0.418 Sum_probs=26.8
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs 527 (1183)
.-||+|-|||| --.-++||-||++||... +++
T Consensus 3 ~~riil~G~pG--SGKsT~a~~La~~~g~~~--i~~ 34 (190)
T d1ak2a1 3 GVRAVLLGPPG--AGKGTQAPKLAKNFCVCH--LAT 34 (190)
T ss_dssp CCEEEEECCTT--SSHHHHHHHHHHHHTCEE--EEH
T ss_pred ccEEEEECCCC--CCHHHHHHHHHHHhCCeE--EeH
Confidence 45899999999 589999999999998664 454
No 325
>d1v8ca1 d.15.3.1 (A:1-87) MoaD-related protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=45.39 E-value=4.9 Score=34.26 Aligned_cols=27 Identities=22% Similarity=0.220 Sum_probs=22.1
Q ss_pred eEEEcCeecC--CCceEEeeCCCEEEEcc
Q 001031 199 EVEVNGNVHP--KDSQVVLRGGDELVFSP 225 (1183)
Q Consensus 199 ~v~vNg~~~~--k~~~~~L~~gDev~f~~ 225 (1183)
.|+|||+.+. .+-..+|+.||||+|-.
T Consensus 54 ~i~vng~~i~~~~~~~~~l~~gdeV~i~P 82 (87)
T d1v8ca1 54 SVFLEGRDVRYLQGLSTPLSPGATLDLFP 82 (87)
T ss_dssp EEEETTEEGGGTTGGGCBCCTTCEEEEEC
T ss_pred EEEEcCeeeecccCCcccCCCCCEEEEEC
Confidence 4889999885 46688999999998743
No 326
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.36 E-value=3.1 Score=39.68 Aligned_cols=27 Identities=22% Similarity=0.459 Sum_probs=23.3
Q ss_pred CCc-eeecCCCCchHHHHHHHHHHHhhcCC
Q 001031 492 CPR-ILLSGPAGSEIYQETLAKALAKHFSA 520 (1183)
Q Consensus 492 s~r-ILLsgp~GsE~Yqe~LaKALA~~f~a 520 (1183)
||. |+|.|+|| -..-+||++||+++++
T Consensus 1 ~p~li~l~Glpg--sGKSTla~~L~~~l~~ 28 (213)
T d1bifa1 1 CPTLIVMVGLPA--RGKTYISKKLTRYLNF 28 (213)
T ss_dssp CCEEEEEECCTT--SSHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCC--CCHHHHHHHHHHHHHh
Confidence 455 89999999 5899999999999864
No 327
>d1kska3 d.66.1.5 (A:1-59) Pseudouridine synthase RsuA N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.91 E-value=5.8 Score=31.56 Aligned_cols=26 Identities=15% Similarity=0.298 Sum_probs=20.4
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEE
Q 001031 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1183)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f 223 (1183)
+|-|.|||+.+.+.... +..||+|.|
T Consensus 24 ~g~V~Vng~~v~~~~~~-V~~~d~I~~ 49 (59)
T d1kska3 24 GNRVTVDGEIVRNAAFK-LLPEHDVAY 49 (59)
T ss_dssp TTCEEETTEECCCTTCE-ECTTCCEEE
T ss_pred cCcEEECCEEeecCCcC-cCCCCEEEE
Confidence 46799999999987443 467899877
No 328
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=44.70 E-value=5.5 Score=39.34 Aligned_cols=57 Identities=21% Similarity=0.059 Sum_probs=35.1
Q ss_pred cccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCCchHHHHHHHHHHHhhcC
Q 001031 453 FESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAGSEIYQETLAKALAKHFS 519 (1183)
Q Consensus 453 fd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~ 519 (1183)
+++|||= |.....|..+.+--+.+ +..-+....-++|.|||| ....+++|++|+++.
T Consensus 15 P~~~~~R--e~e~~~l~~~l~~~~~~------~~~~~~~~~~l~l~GppG--tGKT~l~~~l~~~l~ 71 (287)
T d1w5sa2 15 PPELRVR--RGEAEALARIYLNRLLS------GAGLSDVNMIYGSIGRVG--IGKTTLAKFTVKRVS 71 (287)
T ss_dssp CSSCSSS--CHHHHHHHHHHHHHHHT------SSCBCCEEEEEECTTCCS--SSHHHHHHHHHHHHH
T ss_pred CCCCCCH--HHHHHHHHHHHHHHHHc------CCCCCCcceEEEeECCCC--CCHHHHHHHHHHHHH
Confidence 4566654 55566666655422222 111112222367899999 899999999999974
No 329
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=44.68 E-value=17 Score=35.38 Aligned_cols=25 Identities=28% Similarity=0.352 Sum_probs=21.6
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHH
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
|.-+|-+.|-.+.|||+|+.+|...
T Consensus 2 p~ini~iiGHvd~GKSTL~~~l~~~ 26 (196)
T d1d2ea3 2 PHVNVGTIGHVDHGKTTLTAAITKI 26 (196)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCcHHHHHHHHHHH
Confidence 5467899999999999999999753
No 330
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=44.42 E-value=3 Score=40.53 Aligned_cols=15 Identities=33% Similarity=0.430 Sum_probs=13.9
Q ss_pred ceEEEEcCCCChHHH
Q 001031 985 KGILLFGPPGTGKTM 999 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~ 999 (1183)
+.+++..|+|||||+
T Consensus 39 ~dvii~a~TGSGKTl 53 (209)
T d1q0ua_ 39 ESMVGQSQTGTGKTH 53 (209)
T ss_dssp CCEEEECCSSHHHHH
T ss_pred CCeEeecccccccce
Confidence 479999999999997
No 331
>d1vjka_ d.15.3.1 (A:) Molybdopterin synthase subunit MoaD {Pyrococcus furiosus [TaxId: 2261]}
Probab=44.14 E-value=5.8 Score=33.60 Aligned_cols=24 Identities=29% Similarity=0.346 Sum_probs=20.0
Q ss_pred eEEEcCeecCCCceEEeeCCCEEEEc
Q 001031 199 EVEVNGNVHPKDSQVVLRGGDELVFS 224 (1183)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gDev~f~ 224 (1183)
.|.|||+.++.. .+|+.||||+|-
T Consensus 61 ~iavN~~~~~~d--~~L~~gDevai~ 84 (88)
T d1vjka_ 61 NIAVNGRYVSWD--EELKDGDVVGVF 84 (88)
T ss_dssp EEEETTBCCCTT--CBCCTTCEEEEE
T ss_pred EEEEcceEcCCC--cCcCCCCEEEEe
Confidence 478999999865 579999999884
No 332
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=43.89 E-value=5.4 Score=44.58 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=16.9
Q ss_pred ceEEEEcCCCChHHHHH-HHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA-KAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA-kAIA~e 1007 (1183)
.++|+.|.||||||+.+ ..++..
T Consensus 25 ~~~lV~A~AGSGKT~~lv~ri~~l 48 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVLTHRIAYL 48 (623)
T ss_dssp SCEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCEEEEEeCchHHHHHHHHHHHHH
Confidence 35888999999999854 445443
No 333
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.69 E-value=3.2 Score=43.83 Aligned_cols=17 Identities=29% Similarity=0.493 Sum_probs=15.4
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||+.|+|||+..
T Consensus 77 ~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 77 GTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred cceeeecccCCCCceec
Confidence 46999999999999976
No 334
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=43.20 E-value=3.9 Score=43.54 Aligned_cols=17 Identities=47% Similarity=0.733 Sum_probs=15.1
Q ss_pred eEEEEcCCCChHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAK 1002 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAk 1002 (1183)
--||+|.+|||||+|..
T Consensus 16 valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 16 VAVFFGLSGTGKTTLST 32 (318)
T ss_dssp EEEEEECTTSCHHHHTC
T ss_pred EEEEEccCCCCcccccc
Confidence 47999999999999774
No 335
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=43.17 E-value=6.1 Score=40.87 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=24.6
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH-----hCCcEEEEe
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE-----AGANFINIS 1016 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e-----Lg~pfi~I~ 1016 (1183)
..+=|.|.|.+|||||-.++... .++||.+++
T Consensus 11 ~kiGivG~Pn~GKSTlfnalT~~~~~~~anypftTi~ 47 (296)
T d1ni3a1 11 LKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATID 47 (296)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHSTTTSTTCCSSCCCC
T ss_pred cEEEEECCCCCCHHHHHHHHHCCCCCCcCCCCccCcc
Confidence 34889999999999999999643 356766544
No 336
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=42.80 E-value=5.7 Score=38.18 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=24.9
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEEccC
Q 001031 197 KGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1183)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1183)
-|.|.|||++|..- .+.++.||+|.+--.
T Consensus 75 Hghi~vNgk~v~iP-Sy~vk~GDvIsvkek 103 (159)
T d1c06a_ 75 HGHILVDGSRVNIP-SYRVKPGQTIAVREK 103 (159)
T ss_dssp TSCEEETTEECCCS-SCCCCSSCEEEECGG
T ss_pred hcceEccceEEEec-ceeecCCcEEeeccc
Confidence 37799999999998 899999999988433
No 337
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.79 E-value=5.5 Score=37.68 Aligned_cols=32 Identities=34% Similarity=0.455 Sum_probs=27.0
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEE
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIV 525 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLil 525 (1183)
|=||+|-|||| -..-++||.||+++|...+-.
T Consensus 2 ~mrIvl~G~pG--SGKtT~a~~La~~~g~~~i~~ 33 (180)
T d1akya1 2 SIRMVLIGPPG--AGKGTQAPNLQERFHAAHLAT 33 (180)
T ss_dssp CCEEEEECCTT--SSHHHHHHHHHHHHCCEEEEH
T ss_pred ceEEEEECCCC--CCHHHHHHHHHHHhCCceEec
Confidence 34899999999 589999999999998775544
No 338
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=42.79 E-value=7.4 Score=38.03 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=30.8
Q ss_pred CcccccCcHHHHHHHHHHHHcccCChhhhhcC---CCCCCCceEEEEcCCCChHHHHHHHHH
Q 001031 947 TFDDIGALENVKDTLKELVMLPLQRPELFCKG---QLTKPCKGILLFGPPGTGKTMLAKAVA 1005 (1183)
Q Consensus 947 tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~---~l~kP~~gVLL~GPPGTGKT~LAkAIA 1005 (1183)
+|+|++-.+.+.+.|.+.= +..|...... .+......+++..|+|+|||+.+-...
T Consensus 5 sf~~l~l~~~l~~~l~~~g---~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 5 NFNELNLSDNILNAIRNKG---FEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp CGGGSSCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHH
T ss_pred CHHHcCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeeccc
Confidence 6777766666766665531 1111111000 001111479999999999999665443
No 339
>d1whja_ b.34.10.1 (A:) Restin-like protein 2, Rsnl2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.38 E-value=15 Score=32.66 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=24.3
Q ss_pred CceeeeecCCCCCCCCCC------CCCCCCCCccccccccc
Q 001031 642 SKIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASSLR 676 (1183)
Q Consensus 642 ~kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~~~ 676 (1183)
--|||.||.|..+ +|.. =.|...||-|+..+.+.
T Consensus 53 ~~vGVeldep~Gk-ndGt~~G~~YF~C~~~~GiFv~~~~v~ 92 (102)
T d1whja_ 53 QWAGIELDEPEGK-NNGSVGRVQYFKCAPKYGIFAPLSKIS 92 (102)
T ss_dssp EEEEEEESSSCCS-BSSEETTEECCCCCTTTEEEEEGGGEE
T ss_pred cEEEEEECCCCCC-CCCEECCEEEeecCCCcEEEecHHHee
Confidence 4689999998543 2322 47999999888777654
No 340
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=41.36 E-value=13 Score=38.07 Aligned_cols=44 Identities=23% Similarity=0.382 Sum_probs=27.0
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHh---C-------CcEEEEecCcccccccc
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEA---G-------ANFINISMSSITSKWFG 1026 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eL---g-------~pfi~I~~s~L~s~~~G 1026 (1183)
...|.||.=..|+|||..+-++...+ + .+++.+....+...|..
T Consensus 78 ~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl~~qW~~ 131 (298)
T d1z3ix2 78 NSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYN 131 (298)
T ss_dssp TCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHHHHHHHH
T ss_pred cCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccchhhHHHHH
Confidence 34689999999999998655443322 1 13555555555555543
No 341
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=41.27 E-value=23 Score=35.01 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=22.3
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhC
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
+..++.+.|-...|||+|+.+|....+
T Consensus 8 ~~~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 8 EMLRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred CcceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 334689999999999999999976554
No 342
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=41.27 E-value=4.9 Score=42.65 Aligned_cols=17 Identities=47% Similarity=0.733 Sum_probs=14.9
Q ss_pred eEEEEcCCCChHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAK 1002 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAk 1002 (1183)
--||+|.+|||||+|..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (313)
T d2olra1 16 VAVFFGLSGTGKTTLST 32 (313)
T ss_dssp EEEEECSTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 46999999999999874
No 343
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=41.22 E-value=3.6 Score=44.03 Aligned_cols=17 Identities=24% Similarity=0.581 Sum_probs=14.9
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||++|+|||+..
T Consensus 81 ~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 81 GTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEecccCCCCcceee
Confidence 46999999999999864
No 344
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=41.01 E-value=6.3 Score=42.83 Aligned_cols=23 Identities=17% Similarity=0.388 Sum_probs=20.5
Q ss_pred CceEEEEcCCCChHHHHHHHHHH
Q 001031 984 CKGILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 984 ~~gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
+-.|.|.|.||+|||+|..+|..
T Consensus 56 ~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 56 VLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHT
T ss_pred CcEEEEECCCCCCHHHHHHHHhC
Confidence 36799999999999999999963
No 345
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.23 E-value=7.3 Score=38.84 Aligned_cols=52 Identities=21% Similarity=0.348 Sum_probs=32.6
Q ss_pred CCCcccccCcHHHHHHHHHHHHcccCChhhhhcCCC--CCCCceEEEEcCCCChHHH
Q 001031 945 GVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQL--TKPCKGILLFGPPGTGKTM 999 (1183)
Q Consensus 945 ~~tfdDI~Gle~vk~~L~e~V~lpl~~~elf~k~~l--~kP~~gVLL~GPPGTGKT~ 999 (1183)
..+|++++-.+.+.+.|.+.= +.+|.......+ .-..+.+++..|+|||||.
T Consensus 16 ~~sF~~l~L~~~l~~~L~~~g---~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 16 TPTFDTMGLREDLLRGIYAYG---FEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CCSGGGGCCCHHHHHHHHHHT---CCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCCHHHCCCCHHHHHHHHHCC---CCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhh
Confidence 458999988888888887641 122211111000 0113579999999999997
No 346
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=40.19 E-value=20 Score=38.86 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=29.9
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHhCCcEEEEecC
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEAGANFINISMS 1018 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s 1018 (1183)
+.++|.|.+|++|++++.+++...+.|++.|...
T Consensus 29 ~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~ 62 (408)
T d1c4oa1 29 RFVTLLGATGTGKTVTMAKVIEALGRPALVLAPN 62 (408)
T ss_dssp SEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESS
T ss_pred CcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCC
Confidence 3589999999999999999999999998877643
No 347
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.17 E-value=5.2 Score=37.70 Aligned_cols=28 Identities=36% Similarity=0.501 Sum_probs=24.7
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 523 (1183)
+|+|-|||| -..-++||.||++||-..+
T Consensus 2 ~I~i~G~pG--sGKsT~a~~La~~~g~~~i 29 (181)
T d2cdna1 2 RVLLLGPPG--AGKGTQAVKLAEKLGIPQI 29 (181)
T ss_dssp EEEEECCTT--SSHHHHHHHHHHHHTCCEE
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHCCceE
Confidence 699999999 5899999999999987644
No 348
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=40.09 E-value=6.3 Score=38.04 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=26.7
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCCC
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLL 530 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~ 530 (1183)
.|-+.|||| -..-++||.||++||.+ -+|+-+|
T Consensus 5 ~IaIdGp~G--sGKgT~ak~La~~lg~~--~istGdl 37 (223)
T d1q3ta_ 5 QIAIDGPAS--SGKSTVAKIIAKDFGFT--YLDTGAM 37 (223)
T ss_dssp EEEEECSSC--SSHHHHHHHHHHHHCCE--EEEHHHH
T ss_pred EEEEECCCC--CCHHHHHHHHHHHhCCc--EECHHHH
Confidence 467889999 68999999999999877 4565444
No 349
>d1ixda_ b.34.10.1 (A:) Cylindromatosis tumour-suppressor Cyld {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.99 E-value=31 Score=30.59 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=25.7
Q ss_pred ceeeeecCCCCCCCCCC------CCCCCCCCccccccccccc
Q 001031 643 KIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASSLRLD 678 (1183)
Q Consensus 643 kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~~~~d 678 (1183)
-|||.||.+..+.+|.. =.|...||.|+..+.++.|
T Consensus 49 ~~GVeldd~~~G~ndGt~~G~rYF~C~~~~G~Fv~~~~~~~~ 90 (104)
T d1ixda_ 49 LAGLELEDECAGCTDGTFRGTRYFTCALKKALFVKLKSCRPD 90 (104)
T ss_dssp EEEEEESSCCTTCBSSEETTEECSCCCTTCBEEEEGGGEEEC
T ss_pred EEEEEeCCCCCCCcCCEECCEEEEecCCCcEEEechHHCccc
Confidence 58999976544444444 5699999988888766644
No 350
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=39.80 E-value=5.8 Score=37.24 Aligned_cols=28 Identities=21% Similarity=0.294 Sum_probs=24.5
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 523 (1183)
+|+|.|||| --.-++++.||++++...+
T Consensus 2 ~I~i~G~pG--SGKsT~~~~La~~~~~~~i 29 (179)
T d1e4va1 2 RIILLGAPV--AGKGTQAQFIMEKYGIPQI 29 (179)
T ss_dssp EEEEEESTT--SSHHHHHHHHHHHHCCCEE
T ss_pred EEEEECCCC--CCHHHHHHHHHHHhCCcee
Confidence 699999999 5899999999999987644
No 351
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=39.60 E-value=6.4 Score=37.10 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=25.3
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LLi 524 (1183)
+|+|.|||| --.-++|+-||++++...+-
T Consensus 2 ~I~i~G~pG--SGKsT~a~~La~~~g~~~is 30 (182)
T d1s3ga1 2 NIVLMGLPG--AGKGTQADRIVEKYGTPHIS 30 (182)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHCCceee
Confidence 699999999 58899999999999887554
No 352
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=39.34 E-value=7.5 Score=38.02 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=31.7
Q ss_pred EEEEcChhhhhcCChhhHHHHHHHHhcCCCCEEEEEeccC
Q 001031 707 IVFVKDIEKSLTGNNDAYGALKSKLENLPSNVVVIGSHTQ 746 (1183)
Q Consensus 707 Ilf~~Die~~l~~~~~~~~~i~~~L~~L~g~vivIgs~~~ 746 (1183)
|++|+|+|.+ +.+.-+.+-+.||.-+++++.|-.+++
T Consensus 82 viIId~ad~l---~~~aqNaLLK~LEEPp~~t~fiLit~~ 118 (198)
T d2gnoa2 82 YVIVHDCERM---TQQAANAFLKALEEPPEYAVIVLNTRR 118 (198)
T ss_dssp EEEETTGGGB---CHHHHHHTHHHHHSCCTTEEEEEEESC
T ss_pred EEEEeCcccc---chhhhhHHHHHHhCCCCCceeeeccCC
Confidence 8999999994 567777899999999999999988884
No 353
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.01 E-value=18 Score=33.15 Aligned_cols=33 Identities=15% Similarity=0.112 Sum_probs=25.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh-----CCcEEEEec
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA-----GANFINISM 1017 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL-----g~pfi~I~~ 1017 (1183)
-.|+|.|-.|+||++||+++...+ +.++-.++.
T Consensus 7 f~i~~tg~~~~gk~~ia~al~~~l~q~~G~R~vtll~~ 44 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIALLSTFLQFGGGRYYKIFEH 44 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHHHTTSCSCCCEEECCC
T ss_pred eEEEEeCCCCCCHHHHHHHHHHHHHHhcCCcceEEecC
Confidence 359999999999999999997665 345554544
No 354
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=38.83 E-value=33 Score=35.20 Aligned_cols=24 Identities=29% Similarity=0.367 Sum_probs=19.2
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
..++|+|++|+|||+|+..++...
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~~ 91 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILNQ 91 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHTC
T ss_pred ceEeeccCCCCChHHHHHHHHhhh
Confidence 358999999999999997655443
No 355
>d2gy9d1 d.66.1.2 (D:2-205) Ribosomal protein S4 {Escherichia coli [TaxId: 562]}
Probab=38.63 E-value=5.4 Score=39.81 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=25.5
Q ss_pred CCceEEEcCeecCCCceEEeeCCCEEEEccC
Q 001031 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1183)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1183)
+-|.|.|||++|..- .+.++.||+|.+--.
T Consensus 117 ~Hghi~VNgk~VnIP-Sy~vk~GDvIsvkek 146 (204)
T d2gy9d1 117 SHKAIMVNGRVVNIA-SYQVSPNDVVSIREK 146 (204)
T ss_dssp HTTCEEESSSBCCCT-TCBCCTTCBEEECTT
T ss_pred HhcceecCCEEEEec-cEeecCCCEEEeccc
Confidence 346799999999998 899999999988543
No 356
>d2hqha1 b.34.10.1 (A:26-97) Dynactin 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.18 E-value=8.5 Score=32.24 Aligned_cols=34 Identities=26% Similarity=0.491 Sum_probs=23.7
Q ss_pred CceeeeecCCCCCCCCCC------CCCCCCCCccccccccc
Q 001031 642 SKIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASSLR 676 (1183)
Q Consensus 642 ~kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~~~ 676 (1183)
--|||.||.|..+ +|.. =.|...||.|+..+.++
T Consensus 31 ~~vGVeldep~Gk-ndGt~~G~~YF~C~~~~G~Fv~~~~v~ 70 (72)
T d2hqha1 31 KWVGVILDEAKGK-NDGTVQGRKYFTCDEGHGIFVRQSQIQ 70 (72)
T ss_dssp CEEEEEESSSCSS-BSSEETTEESSCCCTTTEEEECGGGEE
T ss_pred cEEEEEEccCCCC-CCCEECCEEEEecCCCcEEEechHHEE
Confidence 4689999998543 3333 56999999887666543
No 357
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=37.33 E-value=19 Score=36.05 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=22.2
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHHh
Q 001031 982 KPCKGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 982 kP~~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+|..+|.+.|-.+.|||+|+.+|+..+
T Consensus 4 k~~iNi~iiGHvD~GKsTl~~~ll~~~ 30 (239)
T d1f60a3 4 KSHINVVVIGHVDSGKSTTTGHLIYKC 30 (239)
T ss_dssp CEEEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCccEEEEEeCCCCCHHHHHHHHHHHc
Confidence 344589999999999999999987543
No 358
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=37.32 E-value=4.7 Score=37.78 Aligned_cols=37 Identities=22% Similarity=0.241 Sum_probs=29.6
Q ss_pred CCCCCCCCcee-ecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001031 486 SDLPTMCPRIL-LSGPAGSEIYQETLAKALAKHFSARLLI 524 (1183)
Q Consensus 486 ~~l~~~s~rIL-Lsgp~GsE~Yqe~LaKALA~~f~a~LLi 524 (1183)
..+.+..|.|. ++||+|| ..-+|||+|+++|+...+.
T Consensus 15 ~~~~~~~~~iIgI~G~~GS--GKSTla~~L~~~l~~~~~~ 52 (198)
T d1rz3a_ 15 LAIKTAGRLVLGIDGLSRS--GKTTLANQLSQTLREQGIS 52 (198)
T ss_dssp HTSCCSSSEEEEEEECTTS--SHHHHHHHHHHHHHHTTCC
T ss_pred HhccCCCCEEEEEECCCCC--CHHHHHHHHHHHhcccccc
Confidence 35777788755 9999995 8999999999988875433
No 359
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=37.10 E-value=4.7 Score=42.62 Aligned_cols=17 Identities=29% Similarity=0.532 Sum_probs=15.0
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||..|+|||+..
T Consensus 86 ~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 86 CSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEeeeccccccceee
Confidence 45999999999999975
No 360
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=36.87 E-value=6.2 Score=41.97 Aligned_cols=17 Identities=47% Similarity=0.727 Sum_probs=15.1
Q ss_pred eEEEEcCCCChHHHHHH
Q 001031 986 GILLFGPPGTGKTMLAK 1002 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAk 1002 (1183)
--||+|-+|||||+|..
T Consensus 16 ~alfFGLSGTGKTTLs~ 32 (323)
T d1ii2a1 16 VTVFFGLSGTGKTTLSA 32 (323)
T ss_dssp EEEEECCTTSSHHHHHC
T ss_pred EEEEEccCCCCccccee
Confidence 46899999999999984
No 361
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=36.09 E-value=8 Score=39.52 Aligned_cols=30 Identities=30% Similarity=0.410 Sum_probs=21.3
Q ss_pred eEEEEcCCCChHHHHHHHHHHH----hCCcEEEE
Q 001031 986 GILLFGPPGTGKTMLAKAVATE----AGANFINI 1015 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~e----Lg~pfi~I 1015 (1183)
.+=|.|-|.+|||||-.++... .++||.++
T Consensus 4 ~~GivG~Pn~GKSTlf~~lt~~~~~~~~ypf~ti 37 (278)
T d1jala1 4 KCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTI 37 (278)
T ss_dssp EEEEECCTTSSHHHHHHHHHHTC------CCCCC
T ss_pred eEEEECCCCCCHHHHHHHHHCCCCccccCCCCCC
Confidence 4678999999999999998633 35666543
No 362
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=35.61 E-value=14 Score=37.28 Aligned_cols=60 Identities=18% Similarity=0.207 Sum_probs=43.8
Q ss_pred cccccccchhhHHHHHHhhhhhhccccccccccCCCCCCCCceeecCCCC---chHHHHHHHHHHHhhcCCeEEE
Q 001031 453 FESFPYYLSDITKNVLIASTYVHLKCNNFAKYASDLPTMCPRILLSGPAG---SEIYQETLAKALAKHFSARLLI 524 (1183)
Q Consensus 453 fd~FPYylse~tk~~L~~~~~~hLk~~~~~k~~~~l~~~s~rILLsgp~G---sE~Yqe~LaKALA~~f~a~LLi 524 (1183)
-++|||-|.+.-+.++-+..- -+....+ -.-||+|..| ||+|-...+.++.+..+|=+|+
T Consensus 49 ~~~lP~~lt~~Q~~~~~~i~~-~~~~~~~-----------~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~ 111 (233)
T d2eyqa3 49 CDSFPFETTPDQAQAINAVLS-DMCQPLA-----------MDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLV 111 (233)
T ss_dssp HHTCCSCCCHHHHHHHHHHHH-HHHSSSC-----------CEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEEC
T ss_pred hhccccccchhHHHHHHHHHH-HHhccCc-----------cCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEc
Confidence 367999999888877654322 2222222 2469999999 9999999999999888876553
No 363
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=34.53 E-value=11 Score=36.06 Aligned_cols=24 Identities=25% Similarity=0.331 Sum_probs=18.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
+.+|+.-|+|+|||..+.......
T Consensus 41 ~~vlv~apTGsGKT~~~~~~~~~~ 64 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCYQIPALLL 64 (206)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHHS
T ss_pred CCEEEEcCCCCCCcchhhhhhhhc
Confidence 479999999999998765444333
No 364
>d1fm0d_ d.15.3.1 (D:) Molybdopterin synthase subunit MoaD {Escherichia coli [TaxId: 562]}
Probab=33.84 E-value=12 Score=31.30 Aligned_cols=24 Identities=33% Similarity=0.372 Sum_probs=19.4
Q ss_pred eEEEcCeecCCCceEEeeCCCEEEEc
Q 001031 199 EVEVNGNVHPKDSQVVLRGGDELVFS 224 (1183)
Q Consensus 199 ~v~vNg~~~~k~~~~~L~~gDev~f~ 224 (1183)
.|-||++.++.. .+|+.||||+|=
T Consensus 52 ~vavn~~~~~~~--~~l~~gdevAi~ 75 (81)
T d1fm0d_ 52 LAAVNQTLVSFD--HPLTDGDEVAFF 75 (81)
T ss_dssp EEEETTEECCTT--CBCCTTCEEEEE
T ss_pred EEecCceecCCC--CCcCCCCEEEEE
Confidence 467899988765 589999999883
No 365
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=33.54 E-value=18 Score=38.08 Aligned_cols=17 Identities=35% Similarity=0.642 Sum_probs=14.9
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||..|+|||+..
T Consensus 84 ~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 84 VCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred cceeeeeccCCcccccc
Confidence 46899999999999865
No 366
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=33.27 E-value=5.4 Score=42.36 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=14.9
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||..|+|||+..
T Consensus 82 ~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 82 CTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EEEEEEECTTSSHHHHH
T ss_pred ceEEeeeeccccceEEe
Confidence 46999999999999865
No 367
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=33.05 E-value=11 Score=43.89 Aligned_cols=24 Identities=25% Similarity=0.410 Sum_probs=21.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.|+|.|.+|+|||.-++.|.+++
T Consensus 87 QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 87 QCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCCHHHHHHHHHHHH
Confidence 579999999999999999887765
No 368
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=32.71 E-value=11 Score=44.06 Aligned_cols=24 Identities=33% Similarity=0.451 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
..|++.|.+|+|||.-++.|.+++
T Consensus 126 QsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 126 QSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCCHHHHHHHHHHHH
Confidence 589999999999999999887765
No 369
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=32.55 E-value=9.2 Score=36.19 Aligned_cols=30 Identities=17% Similarity=0.196 Sum_probs=25.3
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEE
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLI 524 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLi 524 (1183)
+-|+|.|||| -..-++|+.||+++|...+-
T Consensus 7 ~iI~i~G~pG--SGKsT~a~~La~~~g~~~i~ 36 (194)
T d1qf9a_ 7 NVVFVLGGPG--SGKGTQCANIVRDFGWVHLS 36 (194)
T ss_dssp EEEEEEESTT--SSHHHHHHHHHHHHCCEEEE
T ss_pred cEEEEECCCC--CCHHHHHHHHHHHHCCceEc
Confidence 3589999999 57889999999999976553
No 370
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.19 E-value=9.1 Score=36.17 Aligned_cols=31 Identities=10% Similarity=0.195 Sum_probs=25.6
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs 527 (1183)
+.|+|.|||| -..-++||.||+++|..- +++
T Consensus 2 ~iI~i~GppG--SGKsT~a~~La~~~g~~~--i~~ 32 (194)
T d1teva_ 2 LVVFVLGGPG--AGKGTQCARIVEKYGYTH--LSA 32 (194)
T ss_dssp EEEEEECCTT--SSHHHHHHHHHHHHCCEE--EEH
T ss_pred cEEEEECCCC--CCHHHHHHHHHHHhCCce--EcH
Confidence 4689999999 589999999999998644 554
No 371
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=32.14 E-value=9.9 Score=39.61 Aligned_cols=23 Identities=30% Similarity=0.368 Sum_probs=19.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHH
Q 001031 985 KGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
..++|.|++|+|||+|+..++..
T Consensus 69 Qr~~If~~~g~GKt~ll~~~~~~ 91 (285)
T d2jdia3 69 QRELIIGDRQTGKTSIAIDTIIN 91 (285)
T ss_dssp CBCEEEESTTSSHHHHHHHHHHH
T ss_pred CEEEeecCCCCChHHHHHHHHHh
Confidence 35899999999999998877644
No 372
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=31.57 E-value=5.2 Score=42.98 Aligned_cols=17 Identities=29% Similarity=0.528 Sum_probs=14.9
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||..|+|||+..
T Consensus 115 ~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 115 ATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEEESTTSSHHHHH
T ss_pred ceEEeeccCCCCCceee
Confidence 46999999999999875
No 373
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=30.62 E-value=13 Score=43.51 Aligned_cols=24 Identities=38% Similarity=0.408 Sum_probs=21.7
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.|++.|.+|+|||.-++.|.+++
T Consensus 92 Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 92 QSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 579999999999999999887776
No 374
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=30.12 E-value=23 Score=36.25 Aligned_cols=49 Identities=18% Similarity=0.182 Sum_probs=31.6
Q ss_pred ccCcHHHHHHHHHHHHcccCChhhhhcCCCCCCCceEEEEcCCCChHHHHHHHHHHHh----CCcEEEEe
Q 001031 951 IGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEA----GANFINIS 1016 (1183)
Q Consensus 951 I~Gle~vk~~L~e~V~lpl~~~elf~k~~l~kP~~gVLL~GPPGTGKT~LAkAIA~eL----g~pfi~I~ 1016 (1183)
+.-.+-+++.+...+.. .+.+|.-|+|+|||.++.+++..+ +...+.+-
T Consensus 112 ~~~rdyQ~~av~~~l~~-----------------~~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liiv 164 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVN-----------------RRRILNLPTSAGRSLIQALLARYYLENYEGKILIIV 164 (282)
T ss_dssp CCCCHHHHHHHHHHHHH-----------------SEEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEEC
T ss_pred cccchHHHHHHHHHHhc-----------------CCceeEEEcccCccHHHHHHHHHhhhcccceEEEEE
Confidence 33456666666665541 245777799999999888887543 34444443
No 375
>d2exda1 b.40.12.1 (A:72-143) Hypothetical protein PH0471 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=29.85 E-value=20 Score=29.69 Aligned_cols=46 Identities=24% Similarity=0.228 Sum_probs=35.0
Q ss_pred cceEEEEEecCCceEEEcCeecCCCceEEeeCCCEEEEccC-CCeeE
Q 001031 186 PSGALLEITGGKGEVEVNGNVHPKDSQVVLRGGDELVFSPS-GKHSY 231 (1183)
Q Consensus 186 ~~~a~le~~~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~-~~~ay 231 (1183)
....++++....|.|.|+|+...--..-+|.-|++|.+..- |.+.+
T Consensus 19 ~~g~v~~~~~~~G~V~v~Ge~W~A~s~~~i~~G~~V~Vv~~~G~~L~ 65 (72)
T d2exda1 19 KVGKVVKIAEDHYLVEVEGDKWIAYSDEKLSLGDRVMVVDVDGLKLK 65 (72)
T ss_dssp CEEEEEECCTTCEEEEETTEEEEECCSSCCCTTCEEEEEEECSSCEE
T ss_pred CEEEEEEecCCCEEEEECCEEEEEEeCCccCCCCEEEEEEeECCEEE
Confidence 33456889999999999999987766778999999977544 44333
No 376
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=29.81 E-value=15 Score=36.23 Aligned_cols=22 Identities=27% Similarity=0.403 Sum_probs=19.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHh
Q 001031 987 ILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
|-|.|.+++|||+|+.+|....
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~~ 29 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGSA 29 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhhc
Confidence 8889999999999999997654
No 377
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=29.62 E-value=9 Score=35.06 Aligned_cols=27 Identities=11% Similarity=0.220 Sum_probs=23.2
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCC
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSA 520 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a 520 (1183)
|+=|++.||+| -..-+++|.||++|+.
T Consensus 1 ~kiI~i~G~~G--sGKsT~~~~L~~~l~~ 27 (190)
T d1khta_ 1 NKVVVVTGVPG--VGSTTSSQLAMDNLRK 27 (190)
T ss_dssp CCEEEEECCTT--SCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCC--CCHHHHHHHHHHHHHH
Confidence 45699999999 6899999999998865
No 378
>d1p9ka_ d.66.1.6 (A:) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
Probab=29.54 E-value=6.1 Score=33.50 Aligned_cols=26 Identities=27% Similarity=0.581 Sum_probs=20.2
Q ss_pred CceEEEcCeecCCCceEEeeCCCEEEE
Q 001031 197 KGEVEVNGNVHPKDSQVVLRGGDELVF 223 (1183)
Q Consensus 197 ~G~v~vNg~~~~k~~~~~L~~gDev~f 223 (1183)
.|.|.|||+.+.+... .++.||+|.|
T Consensus 45 ~G~V~VNG~~~~~p~~-~V~~~d~I~v 70 (79)
T d1p9ka_ 45 EGQVKVDGAVETRKRC-KIVAGQTVSF 70 (79)
T ss_dssp HHHHEETTBCCCCSSC-CCCSSEEEEE
T ss_pred hCCcccCCEEeccccc-cCCCCCEEEE
Confidence 4779999999976644 5566899987
No 379
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=29.42 E-value=13 Score=44.06 Aligned_cols=24 Identities=38% Similarity=0.499 Sum_probs=21.0
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.|++.|.+|+|||.-++.|.+++
T Consensus 124 QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 124 QSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHH
Confidence 579999999999999888777665
No 380
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.27 E-value=12 Score=35.48 Aligned_cols=33 Identities=30% Similarity=0.402 Sum_probs=26.8
Q ss_pred CceeecCCCCchHHHHHHHHHHHhhcCCeEEEEec
Q 001031 493 PRILLSGPAGSEIYQETLAKALAKHFSARLLIVDS 527 (1183)
Q Consensus 493 ~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs 527 (1183)
|=|.|+||+| -..-+|+|.|+++|.-.+-+.-+
T Consensus 2 rpIvl~GpsG--~GK~tl~~~L~~~~~~~~~~~~~ 34 (186)
T d1gkya_ 2 RPIVISGPSG--TGKSTLLKKLFAEYPDSFGFSVS 34 (186)
T ss_dssp CCEEEECCTT--SSHHHHHHHHHHHCTTTEEECCE
T ss_pred CeEEEECCCC--CCHHHHHHHHHHhCCcceeEEEe
Confidence 4599999999 58999999999999876654443
No 381
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=28.70 E-value=14 Score=43.63 Aligned_cols=24 Identities=33% Similarity=0.389 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.|+|.|.+|+|||.-++.|.+.+
T Consensus 122 Q~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 122 QSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHH
Confidence 579999999999999988887765
No 382
>d2uubd1 d.66.1.2 (D:2-209) Ribosomal protein S4 {Thermus thermophilus [TaxId: 274]}
Probab=28.55 E-value=13 Score=37.09 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=25.2
Q ss_pred CCceEEEcCeecCCCceEEeeCCCEEEEccC
Q 001031 196 GKGEVEVNGNVHPKDSQVVLRGGDELVFSPS 226 (1183)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~ 226 (1183)
+-|.|.|||++|..- .+.++.||+|.+--.
T Consensus 121 ~Hg~i~vNg~~v~ip-s~~~~~gd~I~vrek 150 (208)
T d2uubd1 121 RHGHITVNGRRVDLP-SYRVRPGDEIAVAEK 150 (208)
T ss_dssp HTTCEEETTEECCCT-TCBCCTTCEEEECGG
T ss_pred HhcCeecCCeEEEec-cEEecCCceeehhhc
Confidence 346799999999987 889999999988543
No 383
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=27.98 E-value=13 Score=38.34 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=17.6
Q ss_pred EEEEcCCCChHHHHHHHHHH----HhCCcEEEEe
Q 001031 987 ILLFGPPGTGKTMLAKAVAT----EAGANFINIS 1016 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~----eLg~pfi~I~ 1016 (1183)
|=|.|-|.+|||+|..++.. ..++||.+++
T Consensus 3 v~lvG~pn~GKStlfn~lt~~~~~v~nypftT~~ 36 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATLVDVEIANYPFTTIE 36 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC--------------
T ss_pred EeEECCCCCCHHHHHHHHHCCCCchhcCCCCccc
Confidence 66899999999999999942 2367766543
No 384
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=27.69 E-value=12 Score=39.84 Aligned_cols=17 Identities=35% Similarity=0.640 Sum_probs=15.0
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||..|+|||+..
T Consensus 76 ~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeeeccccCCCCccccc
Confidence 46999999999999974
No 385
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=27.06 E-value=17 Score=35.62 Aligned_cols=27 Identities=22% Similarity=0.474 Sum_probs=22.4
Q ss_pred CCceEEEEcCCCChHHHHHHHHHHHhC
Q 001031 983 PCKGILLFGPPGTGKTMLAKAVATEAG 1009 (1183)
Q Consensus 983 P~~gVLL~GPPGTGKT~LAkAIA~eLg 1009 (1183)
|.-+|.+.|--+.|||+|+.+|...+|
T Consensus 2 p~iNi~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 2 PHLNLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHHHHB
T ss_pred CccEEEEEecCCCCHHHHHHHHHHHcC
Confidence 445789999999999999999865554
No 386
>d1y9qa2 b.82.1.15 (A:83-181) Probable transcriptional regulator VC1968, C-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=26.95 E-value=36 Score=28.94 Aligned_cols=37 Identities=19% Similarity=0.310 Sum_probs=30.4
Q ss_pred EEEEEecCCceEEEcCeecCCCceEEeeCCCEEEEccCCCeeE
Q 001031 189 ALLEITGGKGEVEVNGNVHPKDSQVVLRGGDELVFSPSGKHSY 231 (1183)
Q Consensus 189 a~le~~~~~G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~~ay 231 (1183)
-++=+.++.+.|.+||+ .++|+.||-+.|-....|+|
T Consensus 46 E~~~Vl~G~~~~~~~~~------~~~l~~GD~~~~~~~~~H~~ 82 (99)
T d1y9qa2 46 EYIHVLEGIMKVFFDEQ------WHELQQGEHIRFFSDQPHGY 82 (99)
T ss_dssp EEEEEEESCEEEEETTE------EEEECTTCEEEEECSSSEEE
T ss_pred EEEEEEcCceEEEecce------EEEecCCCEEEECCCCeEEE
Confidence 44556677888888875 88999999999998888888
No 387
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=26.65 E-value=17 Score=42.51 Aligned_cols=24 Identities=33% Similarity=0.429 Sum_probs=21.4
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
-.|+|.|.+|+|||.-++.|.+.+
T Consensus 95 Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 95 QSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 589999999999999998887765
No 388
>d1whka_ b.34.10.1 (A:) Restin-like protein 2, Rsnl2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.50 E-value=43 Score=28.95 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=25.3
Q ss_pred CceeeeecCCCCCCCCCC------CCCCCCCCcccccccccc
Q 001031 642 SKIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASSLRL 677 (1183)
Q Consensus 642 ~kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~~~~ 677 (1183)
--|||.||.|..+ +|.. =.|...||-|+..+.+.+
T Consensus 42 ~~vGVElD~p~Gk-ndGtv~G~~YF~C~~~~G~Fv~~~~v~~ 82 (91)
T d1whka_ 42 IWLGLELRSAKGK-NDGAVGDKRYFTCKPNYGVLVRPSRVTY 82 (91)
T ss_dssp EEEEEECSSSCSS-CCSEETTEECCCCSTTCCCEECGGGEEC
T ss_pred CEEEEEeCCCCCC-CCCEECCEEEeecCCCceEEeCHHHeEE
Confidence 4589999997543 3322 469999998888776654
No 389
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=26.45 E-value=11 Score=34.53 Aligned_cols=35 Identities=9% Similarity=0.113 Sum_probs=27.3
Q ss_pred cCCCCEEEEEcChhhhhcCChhhHHHHHHHHhcCC
Q 001031 701 SKSSPLIVFVKDIEKSLTGNNDAYGALKSKLENLP 735 (1183)
Q Consensus 701 ~~~~P~Ilf~~Die~~l~~~~~~~~~i~~~L~~L~ 735 (1183)
....|-||.+|++........++...+...|...+
T Consensus 96 ~~~~~~vlllDE~~~~~~~~~~~~~~l~~~l~~~~ 130 (178)
T d1ye8a1 96 KKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPN 130 (178)
T ss_dssp HHCTTCEEEECCCSTTGGGCHHHHHHHHHHHTCTT
T ss_pred HhcCCCceeecCCCccchhhHHHHHHHHHHhccCC
Confidence 34799999999997766677888888888887543
No 390
>d1h3fa2 d.66.1.4 (A:352-432) Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=26.26 E-value=29 Score=29.03 Aligned_cols=32 Identities=6% Similarity=0.097 Sum_probs=22.2
Q ss_pred ceEEEcCeecCCCceEEeeCCCEEEEccCCCee
Q 001031 198 GEVEVNGNVHPKDSQVVLRGGDELVFSPSGKHS 230 (1183)
Q Consensus 198 G~v~vNg~~~~k~~~~~L~~gDev~f~~~~~~a 230 (1183)
|-|+|||+++.-- ...|..||++++..-.++-
T Consensus 43 g~V~iN~~ki~d~-~~~l~~~~~~il~~GKK~~ 74 (81)
T d1h3fa2 43 RGLRLDGEVLTDP-MLQVDLSRPRILQRGKDRF 74 (81)
T ss_dssp TCEEETTEECCCT-TCEEECSSCEEEEETTTEE
T ss_pred CCEEECCEEecCc-cceecCCCeEEEEecCccE
Confidence 4579999999643 4567788888775544433
No 391
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=26.19 E-value=17 Score=35.23 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=33.5
Q ss_pred CCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEecCCCCC
Q 001031 492 CPRILLSGPAGSEIYQETLAKALAKHFSARLLIVDSLLLPG 532 (1183)
Q Consensus 492 s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilDs~~~~g 532 (1183)
++.|+|.||+| +...+|++.+|+..+.+...+|......
T Consensus 29 ~~~i~i~G~~G--~GKTsLl~~~~~~~~~~~~~i~~~~~~~ 67 (283)
T d2fnaa2 29 APITLVLGLRR--TGKSSIIKIGINELNLPYIYLDLRKFEE 67 (283)
T ss_dssp SSEEEEEESTT--SSHHHHHHHHHHHHTCCEEEEEGGGGTT
T ss_pred CCEEEEEcCCC--CcHHHHHHHHHHHCCCCeEEEEeccccc
Confidence 46799999999 8999999999999999999998765433
No 392
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=25.94 E-value=80 Score=25.25 Aligned_cols=34 Identities=15% Similarity=0.195 Sum_probs=30.6
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCc
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~ 1019 (1183)
.|.||+-+||+.-..|+.+....|.+|..++...
T Consensus 2 ki~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~~ 35 (76)
T d1h75a_ 2 RITIYTRNDCVQCHATKRAMENRGFDFEMINVDR 35 (76)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEEeCCCCccHHHHHHHHHhcCceeEEEeecC
Confidence 4789999999999999999999999999988643
No 393
>d2ogqa2 d.223.1.2 (A:507-593) Serine/threonine-protein kinase plk C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.92 E-value=38 Score=28.91 Aligned_cols=31 Identities=13% Similarity=0.337 Sum_probs=23.4
Q ss_pred CCceEEEcCeecCCCceEEeeC-CCEEEEccCCC
Q 001031 196 GKGEVEVNGNVHPKDSQVVLRG-GDELVFSPSGK 228 (1183)
Q Consensus 196 ~~G~v~vNg~~~~k~~~~~L~~-gDev~f~~~~~ 228 (1183)
+||+|+|| .+.-+++++|.+ |+-|.+.-..+
T Consensus 20 SngtvQVN--fF~DhtKiil~~~~~~vtyid~~~ 51 (87)
T d2ogqa2 20 SNGSVQIN--FFQDHTKLILCPLMAAVTYIDEKR 51 (87)
T ss_dssp TTSCEEEE--ETTTCCEEEEETTTTEEEEECTTC
T ss_pred cCCcEEEE--EeCCCcEEEEcCCCCEEEEEecCC
Confidence 68899998 565677888887 67777766655
No 394
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.76 E-value=13 Score=35.17 Aligned_cols=36 Identities=11% Similarity=-0.035 Sum_probs=28.3
Q ss_pred CCCCCceeecCCCCchHHHHHHHHHHHhhcCCeEEEEe
Q 001031 489 PTMCPRILLSGPAGSEIYQETLAKALAKHFSARLLIVD 526 (1183)
Q Consensus 489 ~~~s~rILLsgp~GsE~Yqe~LaKALA~~f~a~LLilD 526 (1183)
++-..=|||+|||| -..-++||.|+...++..+-.|
T Consensus 11 ~~~p~liil~G~pG--sGKST~a~~l~~~~~~~~i~~D 46 (172)
T d1yj5a2 11 SPNPEVVVAVGFPG--AGKSTFIQEHLVSAGYVHVNRD 46 (172)
T ss_dssp CSSCCEEEEECCTT--SSHHHHHHHHTGGGTCEEEEHH
T ss_pred CCCCEEEEEECCCC--CCHHHHHHHHHHhcCCEEEchH
Confidence 34445799999999 5788999999999887766544
No 395
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=25.37 E-value=1.9e+02 Score=24.74 Aligned_cols=85 Identities=12% Similarity=0.056 Sum_probs=36.7
Q ss_pred HHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcEE
Q 001031 1035 VFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRL 1114 (1183)
Q Consensus 1035 lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI 1114 (1183)
.+..+....|.+|++|-- | +. -.+.+..+ .+.. ......-+++++.+.........++..-++ -+
T Consensus 37 al~~~~~~~~dlil~D~~--m-p~---~dG~el~~----~ir~----~~~~~~iPii~lt~~~~~~~~~~~~~~G~~-~~ 101 (123)
T d1mb3a_ 37 ALSIARENKPDLILMDIQ--L-PE---ISGLEVTK----WLKE----DDDLAHIPVVAVTAFAMKGDEERIREGGCE-AY 101 (123)
T ss_dssp HHHHHHHHCCSEEEEESB--C-SS---SBHHHHHH----HHHH----STTTTTSCEEEEC------CHHHHHHHTCS-EE
T ss_pred HHHHHHhCCCCEEEEEec--c-CC---CcHHHHHH----HHHh----CCCcCCCCeEEEEEecCHHHHHHHHHcCCC-EE
Confidence 344555678999999932 2 11 11222222 2221 111122334444332333333233322343 23
Q ss_pred EecCCCHHHHHHHHHHHHhh
Q 001031 1115 MVNLPDAPNREKIIRVILAK 1134 (1183)
Q Consensus 1115 ~I~lPd~eeR~eILk~iL~k 1134 (1183)
...+-+.++..+.++.++++
T Consensus 102 l~KP~~~~~L~~~i~~~l~r 121 (123)
T d1mb3a_ 102 ISKPISVVHFLETIKRLLER 121 (123)
T ss_dssp ECSSCCHHHHHHHHHHHHSC
T ss_pred EECCCCHHHHHHHHHHHHhC
Confidence 34445777777777777754
No 396
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=24.84 E-value=21 Score=36.16 Aligned_cols=26 Identities=27% Similarity=0.443 Sum_probs=22.1
Q ss_pred CCCceEEEEcCCCChHHHHHHHHHHH
Q 001031 982 KPCKGILLFGPPGTGKTMLAKAVATE 1007 (1183)
Q Consensus 982 kP~~gVLL~GPPGTGKT~LAkAIA~e 1007 (1183)
.....+++.|-|.+|||+|+.++...
T Consensus 110 ~~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 110 PRAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCceEEEEEecCccchhhhhhhhhcc
Confidence 34456999999999999999999864
No 397
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.83 E-value=17 Score=34.58 Aligned_cols=28 Identities=36% Similarity=0.466 Sum_probs=23.6
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhcCCeEE
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHFSARLL 523 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f~a~LL 523 (1183)
-|.|+||+| -.+.+|+|+|++.|.-.+.
T Consensus 2 pIvl~GPsG--sGK~tl~~~L~~~~~~~~~ 29 (190)
T d1lvga_ 2 PVVLSGPSG--AGKSTLLKKLFQEHSSIFG 29 (190)
T ss_dssp CEEEECCTT--SSHHHHHHHHHHHHTTTEE
T ss_pred eEEEECCCC--CCHHHHHHHHHHhCCCcee
Confidence 389999999 4889999999999976543
No 398
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=24.52 E-value=18 Score=35.25 Aligned_cols=37 Identities=22% Similarity=0.172 Sum_probs=29.4
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhc----CCeEEEEecCCCCC
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHF----SARLLIVDSLLLPG 532 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f----~a~LLilDs~~~~g 532 (1183)
-|+|+|++| -...+||++|++.+ +.+..+||.-.+--
T Consensus 26 vIwltGlsG--sGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~ 66 (208)
T d1m7ga_ 26 TIWLTGLSA--SGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66 (208)
T ss_dssp EEEEECSTT--SSHHHHHHHHHHHHHHHHCCCEEEECHHHHTT
T ss_pred EEEEECCCC--CCHHHHHHHHHHHHHHhcCceEEEEcchHHHH
Confidence 499999999 58889999999765 56778888766433
No 399
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.32 E-value=15 Score=39.08 Aligned_cols=17 Identities=35% Similarity=0.599 Sum_probs=14.9
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||+.|+|||+..
T Consensus 126 ~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 126 ICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eeEEeeccCCCccceEe
Confidence 46999999999999864
No 400
>d1xo3a_ d.15.3.3 (A:) C9orf74 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.15 E-value=13 Score=32.52 Aligned_cols=28 Identities=18% Similarity=0.210 Sum_probs=21.7
Q ss_pred eEEEcCeec--CCCceEEeeCCCEEEEccC
Q 001031 199 EVEVNGNVH--PKDSQVVLRGGDELVFSPS 226 (1183)
Q Consensus 199 ~v~vNg~~~--~k~~~~~L~~gDev~f~~~ 226 (1183)
-|+|||.-+ ..|-..+|+.||||.|-.+
T Consensus 68 ~v~vN~~di~~l~gl~t~l~dgDeV~~~p~ 97 (101)
T d1xo3a_ 68 LVLINDADWELLGELDYQLQDQDSILFIST 97 (101)
T ss_dssp EEEETTEEHHHHTTTSCCCCTTCEEEEEET
T ss_pred EEEEcCcceeccCCCccCcCCCCEEEEeCC
Confidence 478999865 4566789999999988443
No 401
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.58 E-value=23 Score=33.92 Aligned_cols=26 Identities=31% Similarity=0.413 Sum_probs=22.3
Q ss_pred CCCCceEEEEcCCCChHHHHHHHHHH
Q 001031 981 TKPCKGILLFGPPGTGKTMLAKAVAT 1006 (1183)
Q Consensus 981 ~kP~~gVLL~GPPGTGKT~LAkAIA~ 1006 (1183)
.+|.-+|.+.|....|||||+.+|..
T Consensus 5 ~~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 5 VQPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCCeEEEEEEccCCcHHHHHHHHHh
Confidence 35656899999999999999999964
No 402
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=23.40 E-value=17 Score=37.62 Aligned_cols=23 Identities=30% Similarity=0.388 Sum_probs=20.9
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhc
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHF 518 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f 518 (1183)
-|||.|||| .-..||||+||.=+
T Consensus 30 ~vLl~G~pG--~GKT~lar~~~~iL 52 (333)
T d1g8pa_ 30 GVLVFGDRG--TGKSTAVRALAALL 52 (333)
T ss_dssp CEEEECCGG--GCTTHHHHHHHHHS
T ss_pred eEEEECCCC--ccHHHHHHHHHHhC
Confidence 589999999 79999999999865
No 403
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=22.92 E-value=1.6e+02 Score=25.21 Aligned_cols=86 Identities=8% Similarity=0.057 Sum_probs=41.8
Q ss_pred HHHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcE
Q 001031 1034 AVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRR 1113 (1183)
Q Consensus 1034 ~lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~v 1113 (1183)
+.+..+....|.+|++|-. | +.- .+.+. ...+.. ......-+++++.+.+.......++..-+. -
T Consensus 35 ~al~~l~~~~~dlil~D~~--m-p~~---~G~~l----~~~lr~----~~~~~~~pvi~lt~~~~~~~~~~~~~~G~~-d 99 (121)
T d1zesa1 35 SAVNQLNEPWPDLILLDWM--L-PGG---SGIQF----IKHLKR----ESMTRDIPVVMLTARGEEEDRVRGLETGAD-D 99 (121)
T ss_dssp HHHHHSSSSCCSEEEECSS--C-TTS---CHHHH----HHHHHH----STTTTTSCEEEEESCCSHHHHHHHHHHTCS-E
T ss_pred HHHHHHHccCCCEEEeecC--C-CCC---CHHHH----HHHHHh----CccCCCCeEEEEECCCCHHHHHHHHHCCCC-E
Confidence 4556667788999999943 1 111 12222 222221 111122344544443433333334433443 2
Q ss_pred EEecCCCHHHHHHHHHHHHhh
Q 001031 1114 LMVNLPDAPNREKIIRVILAK 1134 (1183)
Q Consensus 1114 I~I~lPd~eeR~eILk~iL~k 1134 (1183)
+...+.+.++....++.++++
T Consensus 100 ~l~KP~~~~~L~~~v~~~lrR 120 (121)
T d1zesa1 100 YITKPFSPKELVARIKAVMRR 120 (121)
T ss_dssp EEESSCCHHHHHHHHHHHHHT
T ss_pred EEECCCCHHHHHHHHHHHHcC
Confidence 334445777777777766653
No 404
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=22.86 E-value=17 Score=35.23 Aligned_cols=32 Identities=28% Similarity=0.414 Sum_probs=24.8
Q ss_pred EEEEcCCCChHHHHHHHHHHHhCCcEEEEecCc
Q 001031 987 ILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1183)
Q Consensus 987 VLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~ 1019 (1183)
+|+.|+..+|||.+|..++.. +.+++++-.+.
T Consensus 2 iLVtGGarSGKS~~AE~l~~~-~~~~~YiAT~~ 33 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGD-APQVLYIATSQ 33 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCS-CSSEEEEECCC
T ss_pred EEEECCCCccHHHHHHHHHhc-CCCcEEEEccC
Confidence 699999999999999998754 44566665443
No 405
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=21.41 E-value=18 Score=32.26 Aligned_cols=23 Identities=26% Similarity=0.205 Sum_probs=19.4
Q ss_pred ceeecCCCCchHHHHHHHHHHHhhc
Q 001031 494 RILLSGPAGSEIYQETLAKALAKHF 518 (1183)
Q Consensus 494 rILLsgp~GsE~Yqe~LaKALA~~f 518 (1183)
=|+|.||+| -..-+|||+|+.++
T Consensus 4 lIii~G~pG--sGKTTla~~L~~~~ 26 (152)
T d1ly1a_ 4 IILTIGCPG--SGKSTWAREFIAKN 26 (152)
T ss_dssp EEEEECCTT--SSHHHHHHHHHHHS
T ss_pred EEEEECCCC--CCHHHHHHHHHHhC
Confidence 488999999 58899999997655
No 406
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=21.22 E-value=1.2e+02 Score=23.79 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=30.7
Q ss_pred eEEEEcCCCChHHHHHHHHHHHhCCcEEEEecCc
Q 001031 986 GILLFGPPGTGKTMLAKAVATEAGANFINISMSS 1019 (1183)
Q Consensus 986 gVLL~GPPGTGKT~LAkAIA~eLg~pfi~I~~s~ 1019 (1183)
.|.||+-++|+--.-|+.+....|.+|..++..+
T Consensus 2 ~v~iYt~~~C~~C~~ak~~L~~~~i~~~~~~i~~ 35 (74)
T d1r7ha_ 2 SITLYTKPACVQCTATKKALDRAGLAYNTVDISL 35 (74)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCCEEEETTT
T ss_pred EEEEEeCCCChhHHHHHHHHHHcCCceEEEEccC
Confidence 4889999999999999999999999999988643
No 407
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=21.19 E-value=1.2e+02 Score=26.33 Aligned_cols=87 Identities=15% Similarity=0.029 Sum_probs=41.6
Q ss_pred HHHHHhccCCeEEEEeCCcccccCCCCcchHHHHHHHHHHHHHhhcCCcccCCCCEEEEEecCCCCCCcHHHHhccCcEE
Q 001031 1035 VFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRL 1114 (1183)
Q Consensus 1035 lF~~A~k~~PsILfIDEID~Ll~~r~~~~~~e~l~~il~~LL~~Ldgl~~k~~~~VlVIaTTN~p~~Ld~aLlrRFd~vI 1114 (1183)
.+..+...+|.+|++|=- | +.. .+.+. +..++.......-+++++.+-...+....++..-+. .+
T Consensus 41 a~~~~~~~~~dlii~D~~--m-P~~---dG~el--------~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~~~G~~-~~ 105 (128)
T d1jbea_ 41 ALNKLQAGGYGFVISDWN--M-PNM---DGLEL--------LKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGAS-GY 105 (128)
T ss_dssp HHHHHTTCCCCEEEEESC--C-SSS---CHHHH--------HHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCS-EE
T ss_pred HHHHHhcCCCCEEEEecc--c-ccC---CHHHH--------HHHHHhCccCCCCcEEEEECcCCHHHHHHHHHCCCC-EE
Confidence 345667788999999732 1 111 12222 222222221222345444333433333334433332 23
Q ss_pred EecCCCHHHHHHHHHHHHhhcc
Q 001031 1115 MVNLPDAPNREKIIRVILAKEE 1136 (1183)
Q Consensus 1115 ~I~lPd~eeR~eILk~iL~k~~ 1136 (1183)
...+-+..+....++.++++.+
T Consensus 106 l~KP~~~~~L~~~l~~~l~r~~ 127 (128)
T d1jbea_ 106 VVKPFTAATLEEKLNKIFEKLG 127 (128)
T ss_dssp EESSCCHHHHHHHHHHHHHHHT
T ss_pred EECCCCHHHHHHHHHHHHHHcC
Confidence 3444577777777777776543
No 408
>d2e3ia1 b.34.10.1 (A:58-128) Restin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.12 E-value=18 Score=30.03 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=22.6
Q ss_pred CceeeeecCCCCCCCCCC------CCCCCCCCcccccccc
Q 001031 642 SKIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASSL 675 (1183)
Q Consensus 642 ~kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~~ 675 (1183)
--|||.||.|..+ +|.. =.|...||-|+..+.+
T Consensus 29 ~~vGVEld~p~Gk-~dGt~~G~~YF~c~~~~G~Fv~~~~v 67 (71)
T d2e3ia1 29 QWAGIVLDEPIGK-NDGSVAGVRYFQCEPLKGIFTRPSKL 67 (71)
T ss_dssp EEEEEEESSSCSS-BSSEETTEESSCCSTTCEEEECGGGE
T ss_pred cEEEEEECCCCCC-CCCEECCEEEEecCCCcEEEeCHHHE
Confidence 3589999998643 3333 4688888888666544
No 409
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.05 E-value=22 Score=37.76 Aligned_cols=24 Identities=17% Similarity=0.353 Sum_probs=21.3
Q ss_pred ceEEEEcCCCChHHHHHHHHHHHh
Q 001031 985 KGILLFGPPGTGKTMLAKAVATEA 1008 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LAkAIA~eL 1008 (1183)
++|-|.|..|.|||+|+.++....
T Consensus 18 RNI~iiGhvd~GKTTL~d~Ll~~~ 41 (341)
T d1n0ua2 18 RNMSVIAHVDHGKSTLTDSLVQRA 41 (341)
T ss_dssp EEEEEECCGGGTHHHHHHHHHHHH
T ss_pred cEEEEEeCCCCcHHHHHHHHHHHC
Confidence 679999999999999999997544
No 410
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=20.92 E-value=19 Score=37.85 Aligned_cols=17 Identities=29% Similarity=0.569 Sum_probs=15.3
Q ss_pred ceEEEEcCCCChHHHHH
Q 001031 985 KGILLFGPPGTGKTMLA 1001 (1183)
Q Consensus 985 ~gVLL~GPPGTGKT~LA 1001 (1183)
..|+-||..|+|||+..
T Consensus 88 ~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 88 VCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred ceeeeeccCCCCCceee
Confidence 46999999999999975
No 411
>d2e3ha1 b.34.10.1 (A:212-282) CLIP-115 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.77 E-value=30 Score=28.60 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=22.2
Q ss_pred CceeeeecCCCCCCCCCC------CCCCCCCCccccccc
Q 001031 642 SKIGVRFDRSIPEGNNLG------GFCEDDHGFFCTASS 674 (1183)
Q Consensus 642 ~kvgV~fd~~~~~~~~l~------~~~~~~~~~~~~~~~ 674 (1183)
--|||-||.|..+ +|.. =.|.+.||-|+..+.
T Consensus 29 ~~~GVeld~~~Gk-~dG~~~G~~YF~c~~~~G~Fv~~~k 66 (71)
T d2e3ha1 29 EWCGVELDEPLGK-NDGAVAGTRYFQCQPKYGLFAPVHK 66 (71)
T ss_dssp EEEEEEESSSCCS-BSSEETTEESCCCCTTCEEEEEGGG
T ss_pred CEEEEEECCCCCC-CCCEECCEEEEecCCCCEEEeCHHH
Confidence 4689999998643 3333 468888888866654
Done!