Query 001034
Match_columns 1182
No_of_seqs 350 out of 2942
Neff 4.3
Searched_HMMs 46136
Date Thu Mar 28 13:58:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001034.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001034hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0667 Dual-specificity tyros 100.0 1E-56 2.3E-61 523.6 26.7 320 852-1175 169-507 (586)
2 KOG0605 NDR and related serine 100.0 1.5E-53 3.2E-58 488.1 24.9 338 766-1176 60-451 (550)
3 KOG0598 Ribosomal protein S6 k 100.0 4.6E-47 9.9E-52 421.1 22.3 253 867-1176 23-287 (357)
4 KOG0575 Polo-like serine/threo 100.0 1.2E-46 2.5E-51 436.6 26.1 254 869-1180 18-279 (592)
5 KOG0615 Serine/threonine prote 100.0 2E-47 4.3E-52 427.5 18.0 260 866-1177 169-444 (475)
6 KOG0616 cAMP-dependent protein 100.0 2.3E-46 5.1E-51 406.2 20.7 251 868-1176 43-303 (355)
7 KOG0661 MAPK related serine/th 100.0 6E-47 1.3E-51 429.0 13.1 283 866-1176 7-297 (538)
8 KOG0592 3-phosphoinositide-dep 100.0 4.6E-45 1E-49 418.4 21.9 251 869-1176 73-344 (604)
9 KOG0593 Predicted protein kina 100.0 8.5E-46 1.9E-50 402.5 14.3 280 869-1175 2-289 (396)
10 PTZ00284 protein kinase; Provi 100.0 9.4E-44 2E-48 409.1 30.3 300 868-1177 128-445 (467)
11 KOG0581 Mitogen-activated prot 100.0 1.2E-44 2.7E-49 402.0 21.1 256 867-1178 77-343 (364)
12 KOG0671 LAMMER dual specificit 100.0 1.9E-45 4.2E-50 409.0 13.0 319 853-1176 73-412 (415)
13 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.4E-43 9.5E-48 375.5 29.0 276 869-1173 5-288 (288)
14 KOG0660 Mitogen-activated prot 100.0 4.2E-44 9.2E-49 396.6 20.1 284 867-1179 20-319 (359)
15 KOG0659 Cdk activating kinase 100.0 1.3E-43 2.8E-48 380.7 21.5 282 869-1179 2-290 (318)
16 cd07848 STKc_CDKL5 Catalytic d 100.0 1.3E-42 2.8E-47 368.2 27.0 278 869-1173 1-287 (287)
17 KOG0694 Serine/threonine prote 100.0 1.8E-43 3.9E-48 413.9 22.5 256 864-1176 363-630 (694)
18 KOG0600 Cdc2-related protein k 100.0 9.8E-44 2.1E-48 405.1 19.2 282 867-1176 115-406 (560)
19 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.4E-42 7.3E-47 370.5 28.1 285 868-1177 4-295 (303)
20 KOG1290 Serine/threonine prote 100.0 8.5E-43 1.8E-47 395.7 23.1 321 851-1180 59-560 (590)
21 KOG0583 Serine/threonine prote 100.0 3.6E-42 7.8E-47 390.4 28.0 254 866-1175 14-280 (370)
22 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.3E-42 1.6E-46 370.5 28.9 282 870-1178 1-298 (338)
23 cd07876 STKc_JNK2 Catalytic do 100.0 7.8E-42 1.7E-46 377.8 28.9 302 858-1179 7-324 (359)
24 cd07862 STKc_CDK6 Catalytic do 100.0 6.7E-42 1.4E-46 363.2 26.8 279 869-1173 1-290 (290)
25 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-41 2.8E-46 359.9 27.9 278 870-1173 1-288 (288)
26 KOG0663 Protein kinase PITSLRE 100.0 2.1E-42 4.5E-47 379.8 20.2 287 868-1181 75-372 (419)
27 cd05612 STKc_PRKX_like Catalyt 100.0 8.7E-42 1.9E-46 366.6 23.8 249 869-1175 1-259 (291)
28 cd07874 STKc_JNK3 Catalytic do 100.0 2.9E-41 6.3E-46 372.1 28.1 301 859-1179 4-320 (355)
29 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.3E-41 1.2E-45 362.2 29.0 282 869-1177 6-293 (309)
30 PTZ00263 protein kinase A cata 100.0 1.5E-41 3.2E-46 372.5 24.8 250 868-1175 17-276 (329)
31 PTZ00036 glycogen synthase kin 100.0 2.3E-41 4.9E-46 388.7 27.4 284 868-1178 65-359 (440)
32 cd07875 STKc_JNK1 Catalytic do 100.0 5.9E-41 1.3E-45 371.4 28.8 293 867-1179 22-327 (364)
33 KOG0670 U4/U6-associated splic 100.0 4.7E-43 1E-47 398.6 10.9 317 855-1175 418-751 (752)
34 PHA03212 serine/threonine kina 100.0 4.3E-41 9.4E-46 381.1 26.8 285 868-1180 91-386 (391)
35 KOG0658 Glycogen synthase kina 100.0 7.2E-42 1.6E-46 379.5 18.2 281 869-1179 24-315 (364)
36 KOG0594 Protein kinase PCTAIRE 100.0 2.6E-41 5.6E-46 374.0 22.1 289 869-1180 11-312 (323)
37 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-40 3.4E-45 369.0 28.2 253 869-1176 1-299 (363)
38 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.2E-41 1.3E-45 367.3 24.0 283 868-1180 14-308 (343)
39 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-40 2.7E-45 364.0 26.3 258 869-1176 1-263 (333)
40 cd05571 STKc_PKB Catalytic dom 100.0 5.8E-41 1.3E-45 366.4 23.1 243 875-1175 1-256 (323)
41 cd05599 STKc_NDR_like Catalyti 100.0 1.1E-40 2.4E-45 368.2 25.1 253 869-1176 1-302 (364)
42 cd05587 STKc_cPKC Catalytic do 100.0 2.3E-40 5E-45 361.3 26.8 250 870-1176 1-263 (324)
43 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.1E-40 1.1E-44 352.7 28.9 284 869-1179 6-295 (301)
44 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-40 2.8E-45 370.3 24.7 281 870-1176 1-294 (372)
45 PTZ00426 cAMP-dependent protei 100.0 1.7E-40 3.7E-45 368.2 25.1 254 865-1176 26-290 (340)
46 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-40 2.9E-45 363.6 23.2 253 869-1176 1-291 (350)
47 cd05625 STKc_LATS1 Catalytic d 100.0 2.7E-40 5.8E-45 369.0 25.4 252 870-1176 2-311 (382)
48 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-40 8.9E-45 359.3 26.3 250 871-1176 1-263 (324)
49 cd05631 STKc_GRK4 Catalytic do 100.0 4.4E-40 9.6E-45 351.8 25.7 254 871-1176 2-267 (285)
50 KOG0588 Serine/threonine prote 100.0 7.2E-41 1.6E-45 389.8 20.9 252 867-1176 10-269 (786)
51 KOG0032 Ca2+/calmodulin-depend 100.0 4.6E-40 9.9E-45 374.8 27.0 261 864-1176 30-299 (382)
52 cd05629 STKc_NDR_like_fungal C 100.0 3.3E-40 7.2E-45 367.7 25.2 253 869-1176 1-311 (377)
53 cd07868 STKc_CDK8 Catalytic do 100.0 6.1E-40 1.3E-44 353.9 25.9 286 875-1173 7-317 (317)
54 KOG0595 Serine/threonine-prote 100.0 2.7E-40 5.9E-45 370.5 23.8 257 867-1176 8-274 (429)
55 cd05626 STKc_LATS2 Catalytic d 100.0 8.6E-40 1.9E-44 365.9 27.2 252 870-1175 2-310 (381)
56 cd05585 STKc_YPK1_like Catalyt 100.0 5.9E-40 1.3E-44 356.3 24.4 242 877-1176 1-253 (312)
57 cd07850 STKc_JNK Catalytic dom 100.0 1.5E-39 3.2E-44 358.9 27.6 300 859-1178 3-319 (353)
58 cd06649 PKc_MEK2 Catalytic dom 100.0 2.8E-39 6.1E-44 354.3 29.5 296 867-1177 3-308 (331)
59 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-39 7.1E-44 340.4 28.9 278 870-1173 1-285 (285)
60 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-39 2.5E-44 355.7 26.3 250 870-1176 1-263 (323)
61 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-39 2.4E-44 344.6 25.2 276 870-1173 1-284 (284)
62 cd05598 STKc_LATS Catalytic do 100.0 6.9E-40 1.5E-44 364.4 24.0 252 869-1175 1-306 (376)
63 KOG0610 Putative serine/threon 100.0 1.7E-40 3.7E-45 372.3 19.0 255 868-1176 76-398 (459)
64 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-39 2.3E-44 361.5 25.2 253 869-1176 1-299 (360)
65 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-39 2.2E-44 358.5 24.0 244 875-1176 1-257 (328)
66 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-39 3.3E-44 355.9 24.2 244 875-1176 1-257 (323)
67 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-39 3.4E-44 355.3 24.2 244 875-1175 1-258 (320)
68 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-39 2.6E-44 355.3 22.7 254 869-1176 1-269 (330)
69 PF00069 Pkinase: Protein kina 100.0 6.1E-39 1.3E-43 331.9 26.7 252 871-1173 1-260 (260)
70 KOG0597 Serine-threonine prote 100.0 1E-40 2.2E-45 382.5 14.6 251 869-1177 2-258 (808)
71 cd07845 STKc_CDK10 Catalytic d 100.0 8E-39 1.7E-43 344.6 28.2 286 868-1180 6-300 (309)
72 KOG0033 Ca2+/calmodulin-depend 100.0 1.8E-41 3.8E-46 360.8 7.4 261 865-1176 7-273 (355)
73 cd07867 STKc_CDC2L6 Catalytic 100.0 7.1E-39 1.5E-43 344.2 27.7 286 875-1173 7-317 (317)
74 cd05614 STKc_MSK2_N N-terminal 100.0 3.9E-39 8.4E-44 351.6 25.5 250 870-1176 1-273 (332)
75 cd07832 STKc_CCRK Catalytic do 100.0 1E-38 2.2E-43 336.2 27.4 278 870-1174 1-286 (286)
76 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-39 6.4E-44 352.2 24.1 243 876-1175 2-259 (321)
77 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-39 3.2E-44 355.1 21.3 244 875-1176 1-258 (325)
78 cd05620 STKc_nPKC_delta Cataly 100.0 4.7E-39 1E-43 351.0 24.7 245 875-1176 1-254 (316)
79 cd05615 STKc_cPKC_alpha Cataly 100.0 8.9E-39 1.9E-43 349.8 26.8 250 870-1176 1-263 (323)
80 KOG0578 p21-activated serine/t 100.0 4.3E-40 9.3E-45 379.8 17.2 252 869-1176 273-529 (550)
81 PHA03207 serine/threonine kina 100.0 7.8E-39 1.7E-43 360.4 26.7 284 865-1176 88-381 (392)
82 cd05596 STKc_ROCK Catalytic do 100.0 5.9E-39 1.3E-43 359.3 25.3 253 868-1175 42-309 (370)
83 cd05570 STKc_PKC Catalytic dom 100.0 6.5E-39 1.4E-43 349.6 24.7 245 875-1176 1-258 (318)
84 KOG0585 Ca2+/calmodulin-depend 100.0 1.5E-39 3.2E-44 368.7 19.8 260 865-1180 93-383 (576)
85 KOG0612 Rho-associated, coiled 100.0 8E-41 1.7E-45 404.6 10.1 254 868-1176 74-344 (1317)
86 KOG0582 Ste20-like serine/thre 100.0 5.6E-39 1.2E-43 362.4 24.2 265 867-1177 24-300 (516)
87 cd07844 STKc_PCTAIRE_like Cata 100.0 3.2E-38 6.9E-43 335.3 28.4 279 868-1173 4-291 (291)
88 cd06650 PKc_MEK1 Catalytic dom 100.0 1.7E-38 3.8E-43 349.4 27.1 293 867-1178 3-307 (333)
89 cd05621 STKc_ROCK2 Catalytic d 100.0 9.2E-39 2E-43 358.6 25.2 254 868-1176 42-310 (370)
90 cd07841 STKc_CDK7 Catalytic do 100.0 2E-38 4.3E-43 337.9 26.4 282 870-1180 1-292 (298)
91 cd07831 STKc_MOK Catalytic dom 100.0 2.5E-38 5.4E-43 332.5 26.8 273 871-1173 1-282 (282)
92 cd07842 STKc_CDK8_like Catalyt 100.0 2.2E-38 4.8E-43 338.9 26.8 288 870-1173 1-316 (316)
93 cd07847 STKc_CDKL1_4 Catalytic 100.0 5E-38 1.1E-42 330.9 29.0 278 869-1173 1-286 (286)
94 cd05592 STKc_nPKC_theta_delta 100.0 1.2E-38 2.5E-43 347.9 24.6 245 875-1176 1-254 (316)
95 cd05584 STKc_p70S6K Catalytic 100.0 1.2E-38 2.5E-43 348.3 24.2 244 875-1176 2-262 (323)
96 cd05619 STKc_nPKC_theta Cataly 100.0 1.9E-38 4.1E-43 346.7 25.5 245 875-1176 1-254 (316)
97 cd05597 STKc_DMPK_like Catalyt 100.0 3.3E-38 7.1E-43 346.4 27.2 256 869-1176 1-272 (331)
98 cd05588 STKc_aPKC Catalytic do 100.0 1.5E-38 3.2E-43 348.9 24.4 244 875-1175 1-267 (329)
99 PHA03209 serine/threonine kina 100.0 9.6E-39 2.1E-43 355.1 23.0 278 869-1175 66-356 (357)
100 cd05575 STKc_SGK Catalytic dom 100.0 8.7E-39 1.9E-43 348.8 22.2 243 875-1175 1-256 (323)
101 KOG0580 Serine/threonine prote 100.0 1.4E-39 3.1E-44 345.8 15.4 259 865-1175 18-278 (281)
102 KOG0198 MEKK and related serin 100.0 3.6E-39 7.9E-44 358.6 19.2 255 869-1177 17-283 (313)
103 cd07837 STKc_CdkB_plant Cataly 100.0 7.8E-38 1.7E-42 332.3 28.3 283 869-1174 1-295 (295)
104 cd07860 STKc_CDK2_3 Catalytic 100.0 3.1E-38 6.6E-43 333.6 25.0 277 870-1173 1-284 (284)
105 PLN00009 cyclin-dependent kina 100.0 7.7E-38 1.7E-42 333.5 28.3 282 869-1176 2-290 (294)
106 cd05605 STKc_GRK4_like Catalyt 100.0 4.5E-38 9.7E-43 336.4 26.2 255 870-1176 1-267 (285)
107 cd05586 STKc_Sck1_like Catalyt 100.0 7.6E-39 1.6E-43 349.7 20.5 246 877-1176 1-259 (330)
108 cd07865 STKc_CDK9 Catalytic do 100.0 9.5E-38 2.1E-42 332.5 28.1 281 868-1173 11-310 (310)
109 KOG4717 Serine/threonine prote 100.0 5E-39 1.1E-43 364.9 19.1 261 865-1181 14-281 (864)
110 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.7E-37 3.7E-42 330.4 29.3 279 869-1173 5-291 (291)
111 cd05608 STKc_GRK1 Catalytic do 100.0 5.4E-38 1.2E-42 335.0 25.1 250 877-1176 1-263 (280)
112 cd05622 STKc_ROCK1 Catalytic d 100.0 4.8E-38 1E-42 352.5 25.9 254 868-1176 42-310 (371)
113 KOG0690 Serine/threonine prote 100.0 6.1E-40 1.3E-44 358.4 9.8 256 864-1176 163-430 (516)
114 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-37 2.9E-42 328.1 27.2 278 870-1173 1-284 (284)
115 cd05623 STKc_MRCK_alpha Cataly 100.0 8.7E-38 1.9E-42 342.7 26.4 256 869-1176 1-272 (332)
116 PLN00034 mitogen-activated pro 100.0 3E-38 6.4E-43 349.1 22.8 254 868-1178 73-336 (353)
117 cd05582 STKc_RSK_N N-terminal 100.0 1.7E-38 3.6E-43 345.3 20.4 244 875-1176 2-260 (318)
118 cd05618 STKc_aPKC_iota Catalyt 100.0 4.9E-38 1.1E-42 345.3 24.1 245 875-1176 1-268 (329)
119 cd05617 STKc_aPKC_zeta Catalyt 100.0 8E-38 1.7E-42 342.8 25.4 246 875-1176 1-266 (327)
120 cd07833 STKc_CDKL Catalytic do 100.0 1.6E-37 3.4E-42 327.5 26.7 278 869-1173 1-288 (288)
121 cd07849 STKc_ERK1_2_like Catal 100.0 9.6E-38 2.1E-42 341.8 26.0 285 867-1179 3-301 (336)
122 cd05624 STKc_MRCK_beta Catalyt 100.0 9.5E-38 2.1E-42 342.8 25.7 256 869-1176 1-272 (331)
123 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-37 3.2E-42 331.1 26.1 278 869-1173 5-293 (293)
124 cd05604 STKc_SGK3 Catalytic do 100.0 3.9E-38 8.5E-43 343.9 22.1 243 875-1175 1-256 (325)
125 cd05580 STKc_PKA Catalytic dom 100.0 2.3E-37 5.1E-42 330.4 27.5 250 869-1176 1-260 (290)
126 cd05630 STKc_GRK6 Catalytic do 100.0 1.6E-37 3.4E-42 332.8 25.9 254 870-1175 1-266 (285)
127 KOG0608 Warts/lats-like serine 100.0 2E-38 4.4E-43 365.8 20.3 252 869-1175 629-933 (1034)
128 cd06625 STKc_MEKK3_like Cataly 100.0 3.2E-37 6.8E-42 321.1 27.2 249 869-1173 2-263 (263)
129 KOG0599 Phosphorylase kinase g 100.0 3.6E-39 7.8E-44 346.9 12.8 252 869-1173 17-286 (411)
130 cd05602 STKc_SGK1 Catalytic do 100.0 6.8E-38 1.5E-42 342.0 23.0 243 875-1175 1-256 (325)
131 PTZ00024 cyclin-dependent prot 100.0 2E-37 4.4E-42 337.9 26.5 285 866-1180 5-323 (335)
132 cd07835 STKc_CDK1_like Catalyt 100.0 2.1E-37 4.6E-42 327.1 25.7 276 871-1173 1-283 (283)
133 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.6E-37 3.4E-42 340.8 25.1 284 867-1179 3-300 (337)
134 cd05603 STKc_SGK2 Catalytic do 100.0 8.9E-38 1.9E-42 340.0 22.6 243 875-1175 1-256 (321)
135 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-37 2.3E-42 338.3 22.9 283 870-1179 1-298 (330)
136 KOG0591 NIMA (never in mitosis 100.0 1.3E-39 2.9E-44 351.7 7.9 246 866-1164 16-275 (375)
137 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-37 2.5E-42 340.9 23.2 284 868-1180 4-304 (334)
138 PHA03211 serine/threonine kina 100.0 2.8E-37 6E-42 359.1 27.5 281 867-1175 167-460 (461)
139 cd06619 PKc_MKK5 Catalytic dom 100.0 3.2E-37 6.9E-42 327.7 25.4 258 870-1179 2-262 (279)
140 cd06637 STKc_TNIK Catalytic do 100.0 4E-37 8.6E-42 322.6 25.8 253 868-1173 5-272 (272)
141 cd07840 STKc_CDK9_like Catalyt 100.0 4.3E-37 9.4E-42 322.5 25.9 276 871-1173 1-287 (287)
142 cd07880 STKc_p38gamma_MAPK12 C 100.0 5.1E-37 1.1E-41 338.5 27.7 283 867-1179 13-307 (343)
143 cd07838 STKc_CDK4_6_like Catal 100.0 7.6E-37 1.7E-41 321.4 27.7 276 871-1173 1-287 (287)
144 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.1E-37 4.5E-42 327.0 23.4 278 869-1173 1-286 (286)
145 PTZ00283 serine/threonine prot 100.0 4.7E-37 1E-41 359.0 28.3 257 866-1175 29-302 (496)
146 cd06615 PKc_MEK Catalytic doma 100.0 1E-36 2.2E-41 330.0 28.5 291 869-1179 1-296 (308)
147 cd07851 STKc_p38 Catalytic dom 100.0 3.1E-37 6.7E-42 339.8 24.4 283 867-1179 13-307 (343)
148 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.3E-36 2.9E-41 333.9 29.1 286 867-1180 8-298 (328)
149 cd08227 PK_STRAD_alpha Pseudok 100.0 4.9E-37 1.1E-41 335.0 25.5 289 873-1177 2-314 (327)
150 cd07866 STKc_BUR1 Catalytic do 100.0 7.4E-37 1.6E-41 325.7 26.0 279 868-1173 7-311 (311)
151 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.8E-37 1.7E-41 323.3 25.9 254 867-1173 14-282 (282)
152 cd05632 STKc_GRK5 Catalytic do 100.0 1.2E-36 2.6E-41 325.4 27.6 255 870-1176 1-267 (285)
153 cd08529 STKc_FA2-like Catalyti 100.0 2E-36 4.3E-41 313.2 28.3 249 870-1173 1-256 (256)
154 cd07879 STKc_p38delta_MAPK13 C 100.0 6.1E-37 1.3E-41 337.3 25.7 281 867-1176 13-303 (342)
155 cd08223 STKc_Nek4 Catalytic do 100.0 2.4E-36 5.1E-41 313.5 28.6 249 870-1173 1-257 (257)
156 cd05607 STKc_GRK7 Catalytic do 100.0 6.6E-37 1.4E-41 326.1 25.0 249 877-1176 1-260 (277)
157 cd07864 STKc_CDK12 Catalytic d 100.0 1E-36 2.3E-41 324.7 26.4 281 866-1173 4-302 (302)
158 PTZ00267 NIMA-related protein 100.0 8.6E-37 1.9E-41 354.0 28.0 255 868-1175 66-328 (478)
159 cd06612 STKc_MST1_2 Catalytic 100.0 1E-36 2.2E-41 315.4 25.5 250 869-1173 3-256 (256)
160 cd06608 STKc_myosinIII_like Ca 100.0 1.4E-36 3.1E-41 316.0 26.7 256 868-1173 5-275 (275)
161 cd05118 STKc_CMGC Catalytic do 100.0 5.4E-37 1.2E-41 321.9 23.7 276 871-1173 1-283 (283)
162 PHA03210 serine/threonine kina 100.0 2.2E-37 4.7E-42 361.8 22.9 292 864-1176 143-460 (501)
163 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.7E-36 3.7E-41 334.7 28.6 286 867-1180 15-310 (345)
164 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.1E-36 4.5E-41 314.2 27.4 256 869-1173 1-267 (267)
165 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-36 2.8E-41 320.4 26.3 258 869-1177 1-268 (283)
166 cd05574 STKc_phototropin_like 100.0 1.8E-36 3.9E-41 326.8 27.8 254 869-1176 1-295 (316)
167 cd06644 STKc_STK10_LOK Catalyt 100.0 1.7E-36 3.7E-41 323.5 26.8 258 867-1177 10-276 (292)
168 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-36 3.1E-41 334.4 27.0 282 867-1176 3-306 (342)
169 cd06639 STKc_myosinIIIB Cataly 100.0 4.9E-36 1.1E-40 319.2 29.2 258 867-1174 20-291 (291)
170 cd07829 STKc_CDK_like Catalyti 100.0 9.9E-37 2.2E-41 319.8 23.4 275 871-1173 1-282 (282)
171 cd06609 STKc_MST3_like Catalyt 100.0 2E-36 4.4E-41 318.9 25.7 252 869-1177 1-258 (274)
172 cd06611 STKc_SLK_like Catalyti 100.0 1.2E-36 2.5E-41 321.7 23.8 255 868-1176 4-268 (280)
173 cd06654 STKc_PAK1 Catalytic do 100.0 4.8E-36 1E-40 323.0 28.9 253 868-1176 19-276 (296)
174 cd07857 STKc_MPK1 Catalytic do 100.0 3.9E-36 8.5E-41 328.6 28.4 284 870-1179 1-301 (332)
175 cd06638 STKc_myosinIIIA Cataly 100.0 3.8E-36 8.3E-41 318.0 27.3 257 867-1173 16-286 (286)
176 cd06630 STKc_MEKK1 Catalytic d 100.0 1.7E-36 3.7E-41 316.4 24.2 253 870-1174 1-268 (268)
177 cd06628 STKc_MAPKKK_Byr2_like 100.0 3.7E-36 8E-41 314.4 26.7 247 870-1173 1-267 (267)
178 cd08221 STKc_Nek9 Catalytic do 100.0 7.1E-36 1.5E-40 310.4 28.6 249 870-1173 1-256 (256)
179 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.1E-36 2.4E-41 322.8 22.8 260 869-1179 1-271 (286)
180 cd06645 STKc_MAP4K3 Catalytic 100.0 1.3E-36 2.8E-41 318.6 22.8 252 868-1172 8-267 (267)
181 cd06643 STKc_SLK Catalytic dom 100.0 2.9E-36 6.3E-41 319.6 25.8 254 871-1177 7-269 (282)
182 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.7E-36 3.6E-41 331.2 24.5 253 868-1169 6-329 (338)
183 cd06646 STKc_MAP4K5 Catalytic 100.0 2.2E-36 4.7E-41 316.8 24.4 253 867-1172 7-267 (267)
184 cd06631 STKc_YSK4 Catalytic do 100.0 4.6E-36 1E-40 314.1 26.7 248 870-1173 1-265 (265)
185 cd08220 STKc_Nek8 Catalytic do 100.0 6.7E-36 1.5E-40 309.3 27.5 250 870-1173 1-256 (256)
186 cd08218 STKc_Nek1 Catalytic do 100.0 6.6E-36 1.4E-40 310.7 27.5 249 870-1173 1-256 (256)
187 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-36 2.9E-41 320.3 22.6 276 871-1173 1-283 (283)
188 cd08217 STKc_Nek2 Catalytic do 100.0 7.5E-36 1.6E-40 308.3 27.4 251 870-1173 1-265 (265)
189 cd06656 STKc_PAK3 Catalytic do 100.0 3.9E-36 8.4E-41 323.8 26.1 254 868-1177 18-276 (297)
190 cd06613 STKc_MAP4K3_like Catal 100.0 8.7E-36 1.9E-40 309.4 27.2 253 868-1172 2-262 (262)
191 cd06655 STKc_PAK2 Catalytic do 100.0 8.3E-36 1.8E-40 321.7 27.8 252 869-1176 19-275 (296)
192 KOG0201 Serine/threonine prote 100.0 3.3E-38 7.1E-43 356.0 9.4 250 869-1175 13-268 (467)
193 PTZ00266 NIMA-related protein 100.0 3.6E-36 7.9E-41 371.7 28.0 266 863-1179 7-304 (1021)
194 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-35 2.8E-40 306.8 26.5 248 870-1173 1-258 (258)
195 cd05609 STKc_MAST Catalytic do 100.0 1.9E-35 4.1E-40 318.5 28.7 252 869-1175 1-278 (305)
196 cd06605 PKc_MAPKK Catalytic do 100.0 3.2E-36 7E-41 313.8 21.8 252 869-1175 1-262 (265)
197 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-35 3.7E-40 306.9 27.0 251 869-1176 1-262 (264)
198 cd05611 STKc_Rim15_like Cataly 100.0 9.5E-36 2.1E-40 310.8 25.1 248 875-1176 2-257 (260)
199 cd05581 STKc_PDK1 Catalytic do 100.0 5.1E-36 1.1E-40 313.4 22.8 248 869-1173 1-280 (280)
200 cd05096 PTKc_DDR1 Catalytic do 100.0 1.9E-35 4.2E-40 317.7 27.9 259 867-1169 3-300 (304)
201 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-35 2.6E-40 310.5 25.1 244 877-1176 1-258 (262)
202 cd06607 STKc_TAO Catalytic dom 100.0 1.3E-35 2.7E-40 320.2 26.1 256 866-1177 12-274 (307)
203 cd08225 STKc_Nek5 Catalytic do 100.0 1.8E-35 3.8E-40 306.3 26.1 250 870-1173 1-257 (257)
204 cd05578 STKc_Yank1 Catalytic d 100.0 4.1E-36 8.9E-41 313.3 21.5 247 870-1173 1-258 (258)
205 cd07852 STKc_MAPK15 Catalytic 100.0 5.5E-36 1.2E-40 327.5 23.0 282 866-1176 4-301 (337)
206 cd05122 PKc_STE Catalytic doma 100.0 4.9E-35 1.1E-39 297.9 28.1 249 870-1172 1-253 (253)
207 cd06651 STKc_MEKK3 Catalytic d 100.0 2.6E-35 5.7E-40 309.8 26.9 248 870-1174 3-265 (266)
208 cd06652 STKc_MEKK2 Catalytic d 100.0 4.7E-35 1E-39 307.1 28.3 249 869-1174 2-265 (265)
209 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 5.9E-35 1.3E-39 311.5 29.5 261 869-1176 1-272 (287)
210 cd08215 STKc_Nek Catalytic dom 100.0 4.1E-35 8.9E-40 300.9 27.2 251 870-1173 1-258 (258)
211 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.9E-35 6.3E-40 309.1 26.5 252 870-1173 2-272 (272)
212 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-35 7.7E-40 305.7 26.8 246 870-1170 1-252 (255)
213 KOG0611 Predicted serine/threo 100.0 5.7E-37 1.2E-41 341.6 14.1 253 866-1177 50-310 (668)
214 cd06917 STKc_NAK1_like Catalyt 100.0 2.3E-35 5E-40 310.7 25.5 256 870-1179 2-264 (277)
215 cd06626 STKc_MEKK4 Catalytic d 100.0 4.7E-35 1E-39 304.3 27.2 249 870-1173 1-264 (264)
216 KOG0604 MAP kinase-activated p 100.0 4.3E-37 9.4E-42 334.3 12.0 261 867-1176 59-328 (400)
217 cd06641 STKc_MST3 Catalytic do 100.0 3.6E-35 7.7E-40 311.1 26.3 253 870-1180 5-263 (277)
218 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.8E-35 3.8E-40 314.5 24.0 266 869-1179 5-275 (284)
219 cd06616 PKc_MKK4 Catalytic dom 100.0 1.4E-35 3E-40 314.7 23.1 261 869-1175 4-272 (288)
220 KOG0192 Tyrosine kinase specif 100.0 1.5E-35 3.3E-40 335.8 24.6 244 870-1169 42-298 (362)
221 cd05633 STKc_GRK3 Catalytic do 100.0 3.9E-35 8.5E-40 313.4 26.4 246 876-1175 1-260 (279)
222 KOG0589 Serine/threonine prote 100.0 1.7E-36 3.7E-41 346.8 16.9 252 868-1174 3-262 (426)
223 cd05606 STKc_beta_ARK Catalyti 100.0 2.9E-35 6.4E-40 313.7 25.3 246 876-1176 1-261 (278)
224 cd06658 STKc_PAK5 Catalytic do 100.0 9.8E-36 2.1E-40 320.5 21.8 256 869-1180 22-282 (292)
225 cd06606 STKc_MAPKKK Catalytic 100.0 1E-34 2.2E-39 296.8 28.1 248 870-1173 1-260 (260)
226 KOG0696 Serine/threonine prote 100.0 1.2E-36 2.5E-41 339.6 14.9 256 865-1176 345-612 (683)
227 cd06659 STKc_PAK6 Catalytic do 100.0 1.8E-35 3.8E-40 319.3 23.0 253 873-1180 25-281 (297)
228 cd06640 STKc_MST4 Catalytic do 100.0 3.6E-35 7.7E-40 311.1 24.8 252 869-1178 4-261 (277)
229 PHA03390 pk1 serine/threonine- 100.0 4.2E-35 9.1E-40 311.3 25.4 248 869-1175 14-267 (267)
230 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-34 3E-39 297.7 27.8 247 870-1173 1-254 (254)
231 cd05049 PTKc_Trk Catalytic dom 100.0 4.2E-35 9E-40 308.6 23.8 250 869-1169 5-276 (280)
232 cd05577 STKc_GRK Catalytic dom 100.0 5.6E-35 1.2E-39 309.6 25.0 248 877-1176 1-260 (277)
233 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-34 2.3E-39 304.7 26.6 247 869-1170 6-258 (263)
234 KOG0666 Cyclin C-dependent kin 100.0 1.9E-36 4.2E-41 330.3 13.7 296 869-1179 24-346 (438)
235 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.4E-34 3E-39 302.1 26.5 244 869-1169 4-253 (256)
236 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-34 2.6E-39 302.8 26.1 246 868-1169 5-256 (261)
237 cd05579 STKc_MAST_like Catalyt 100.0 4.8E-35 1E-39 302.3 22.8 244 877-1176 1-263 (265)
238 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.1E-34 2.4E-39 306.3 26.0 245 869-1169 5-260 (266)
239 cd05048 PTKc_Ror Catalytic Dom 100.0 6.5E-35 1.4E-39 308.2 24.2 252 868-1170 4-279 (283)
240 cd08226 PK_STRAD_beta Pseudoki 100.0 4.3E-35 9.3E-40 319.9 23.5 290 876-1178 5-316 (328)
241 cd06648 STKc_PAK_II Catalytic 100.0 1.6E-34 3.6E-39 309.0 27.5 254 870-1179 20-278 (285)
242 cd06624 STKc_ASK Catalytic dom 100.0 2.2E-34 4.8E-39 302.5 27.0 247 875-1173 14-268 (268)
243 cd06633 STKc_TAO3 Catalytic do 100.0 2.4E-34 5.3E-39 312.6 28.1 251 870-1176 22-279 (313)
244 KOG0662 Cyclin-dependent kinas 100.0 7.9E-36 1.7E-40 306.9 15.5 281 870-1178 3-291 (292)
245 KOG0986 G protein-coupled rece 100.0 4.1E-36 8.9E-41 339.1 14.4 260 866-1176 182-452 (591)
246 KOG0579 Ste20-like serine/thre 100.0 1.2E-36 2.6E-41 350.3 10.1 255 869-1176 32-295 (1187)
247 cd00192 PTKc Catalytic domain 100.0 1.9E-34 4E-39 296.7 25.2 245 875-1170 1-260 (262)
248 cd05035 PTKc_Axl_like Catalyti 100.0 1.7E-34 3.6E-39 301.6 25.0 249 871-1170 1-268 (273)
249 cd08228 STKc_Nek6 Catalytic do 100.0 2.9E-34 6.2E-39 300.2 26.7 250 869-1170 2-261 (267)
250 PHA02988 hypothetical protein; 100.0 1.9E-34 4.2E-39 310.2 25.9 237 875-1169 26-274 (283)
251 cd05061 PTKc_InsR Catalytic do 100.0 3.6E-34 7.9E-39 305.7 27.8 259 867-1176 4-286 (288)
252 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-34 3.7E-39 306.7 24.9 256 867-1176 17-276 (286)
253 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-34 5.3E-39 296.9 25.3 251 870-1173 1-256 (256)
254 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.4E-35 5.1E-40 311.9 18.0 248 870-1175 5-258 (277)
255 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.5E-34 7.6E-39 303.6 26.6 254 868-1170 5-274 (277)
256 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-34 3.1E-39 311.1 23.9 254 868-1177 18-276 (293)
257 cd05062 PTKc_IGF-1R Catalytic 100.0 3.5E-34 7.6E-39 303.0 26.4 254 866-1170 3-274 (277)
258 cd06618 PKc_MKK7 Catalytic dom 100.0 2.4E-34 5.2E-39 308.2 25.4 255 868-1175 14-278 (296)
259 KOG1151 Tousled-like protein k 100.0 2.4E-36 5.2E-41 338.8 10.3 263 863-1174 457-745 (775)
260 cd05123 STKc_AGC Catalytic dom 100.0 1.5E-34 3.2E-39 298.3 22.8 239 877-1173 1-250 (250)
261 cd05059 PTKc_Tec_like Catalyti 100.0 2.4E-34 5.1E-39 301.0 24.6 245 869-1170 4-254 (256)
262 cd06635 STKc_TAO1 Catalytic do 100.0 4.1E-34 9E-39 310.8 27.1 252 869-1176 25-283 (317)
263 cd05084 PTKc_Fes Catalytic dom 100.0 3.2E-34 7E-39 298.0 24.7 238 876-1169 2-248 (252)
264 cd05032 PTKc_InsR_like Catalyt 100.0 4.9E-34 1.1E-38 300.0 26.2 252 867-1169 4-273 (277)
265 cd05106 PTKc_CSF-1R Catalytic 100.0 1.7E-34 3.7E-39 324.2 24.0 254 867-1169 36-367 (374)
266 KOG0596 Dual specificity; seri 100.0 2.9E-35 6.2E-40 338.1 18.1 258 868-1179 360-636 (677)
267 cd08222 STKc_Nek11 Catalytic d 100.0 1.7E-34 3.7E-39 301.4 22.3 250 870-1173 1-260 (260)
268 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.2E-34 1.1E-38 298.4 26.0 247 866-1169 3-255 (260)
269 cd05075 PTKc_Axl Catalytic dom 100.0 4.7E-34 1E-38 299.4 25.6 248 872-1170 2-267 (272)
270 cd05068 PTKc_Frk_like Catalyti 100.0 6.2E-34 1.3E-38 298.0 26.4 246 868-1169 5-256 (261)
271 cd05071 PTKc_Src Catalytic dom 100.0 5.4E-34 1.2E-38 300.4 26.0 245 868-1169 5-255 (262)
272 KOG0603 Ribosomal protein S6 k 100.0 2.3E-35 5E-40 344.4 17.2 252 867-1180 320-574 (612)
273 cd05104 PTKc_Kit Catalytic dom 100.0 2.4E-34 5.1E-39 322.8 24.3 254 868-1170 34-370 (375)
274 cd06657 STKc_PAK4 Catalytic do 100.0 4.8E-34 1E-38 308.0 25.7 250 874-1179 25-279 (292)
275 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-33 3E-38 296.5 28.5 248 869-1173 2-264 (264)
276 cd05090 PTKc_Ror1 Catalytic do 100.0 6.7E-34 1.5E-38 301.7 26.4 251 869-1170 5-279 (283)
277 cd05039 PTKc_Csk_like Catalyti 100.0 8.8E-34 1.9E-38 295.4 26.7 245 868-1169 5-251 (256)
278 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7E-34 1.5E-38 298.6 26.0 245 869-1170 4-254 (256)
279 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.5E-34 5.4E-39 299.7 22.4 245 869-1169 6-256 (261)
280 cd06634 STKc_TAO2 Catalytic do 100.0 3.9E-34 8.4E-39 309.9 24.7 252 869-1176 15-273 (308)
281 cd05034 PTKc_Src_like Catalyti 100.0 1.2E-33 2.6E-38 294.6 27.5 247 867-1169 4-256 (261)
282 cd08216 PK_STRAD Pseudokinase 100.0 3.6E-34 7.8E-39 308.1 24.2 278 881-1180 12-305 (314)
283 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.8E-34 1.5E-38 297.6 25.6 246 867-1169 4-255 (260)
284 cd05613 STKc_MSK1_N N-terminal 100.0 6.2E-34 1.3E-38 303.0 25.5 254 870-1176 1-274 (290)
285 cd05093 PTKc_TrkB Catalytic do 100.0 8.2E-34 1.8E-38 302.9 26.5 250 869-1169 5-274 (288)
286 cd05069 PTKc_Yes Catalytic dom 100.0 1.1E-33 2.4E-38 296.5 27.0 246 867-1169 4-255 (260)
287 cd08229 STKc_Nek7 Catalytic do 100.0 3.8E-34 8.2E-39 299.3 23.2 249 869-1169 2-260 (267)
288 cd05082 PTKc_Csk Catalytic dom 100.0 8.8E-34 1.9E-38 296.1 25.8 243 869-1169 6-251 (256)
289 cd05089 PTKc_Tie1 Catalytic do 100.0 8.8E-34 1.9E-38 304.5 26.3 252 869-1170 2-271 (297)
290 cd05051 PTKc_DDR Catalytic dom 100.0 8.2E-34 1.8E-38 301.7 25.7 258 868-1169 4-292 (296)
291 cd05088 PTKc_Tie2 Catalytic do 100.0 6.5E-34 1.4E-38 307.5 25.0 253 868-1170 6-276 (303)
292 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-33 2.4E-38 305.1 26.8 255 866-1170 15-295 (307)
293 cd05053 PTKc_FGFR Catalytic do 100.0 9.7E-34 2.1E-38 301.3 25.7 253 868-1170 11-287 (293)
294 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.4E-33 5.2E-38 292.0 28.0 249 869-1169 2-260 (267)
295 cd05112 PTKc_Itk Catalytic dom 100.0 2E-33 4.3E-38 292.2 26.9 245 869-1170 4-254 (256)
296 KOG0574 STE20-like serine/thre 100.0 9.8E-37 2.1E-41 330.8 2.2 252 870-1177 34-290 (502)
297 cd05033 PTKc_EphR Catalytic do 100.0 1.5E-33 3.3E-38 295.8 26.0 246 869-1170 4-261 (266)
298 cd05108 PTKc_EGFR Catalytic do 100.0 8.1E-34 1.8E-38 307.9 24.7 246 868-1170 6-264 (316)
299 smart00219 TyrKc Tyrosine kina 100.0 1.8E-33 3.9E-38 290.2 25.3 244 871-1169 1-256 (258)
300 cd05091 PTKc_Ror2 Catalytic do 100.0 5E-34 1.1E-38 302.1 21.7 251 869-1170 5-279 (283)
301 cd05109 PTKc_HER2 Catalytic do 100.0 2.2E-33 4.7E-38 297.3 26.2 246 867-1169 5-263 (279)
302 cd05583 STKc_MSK_N N-terminal 100.0 1.7E-33 3.6E-38 299.5 25.0 254 870-1176 1-272 (288)
303 cd05050 PTKc_Musk Catalytic do 100.0 1.8E-33 3.9E-38 299.1 25.2 251 868-1169 4-284 (288)
304 PHA02882 putative serine/threo 100.0 2E-33 4.4E-38 302.9 25.6 263 862-1169 5-291 (294)
305 cd05054 PTKc_VEGFR Catalytic d 100.0 6.6E-34 1.4E-38 314.5 22.2 254 868-1170 6-329 (337)
306 KOG4236 Serine/threonine prote 100.0 3.5E-35 7.5E-40 334.3 12.2 248 875-1175 570-824 (888)
307 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.6E-33 7.7E-38 292.8 26.5 246 868-1169 4-262 (268)
308 cd05610 STKc_MASTL Catalytic d 100.0 2.4E-33 5.2E-38 338.8 28.6 145 868-1026 3-152 (669)
309 cd05095 PTKc_DDR2 Catalytic do 100.0 3E-33 6.6E-38 299.7 26.2 258 868-1169 4-292 (296)
310 KOG0607 MAP kinase-interacting 100.0 7E-35 1.5E-39 318.8 13.7 272 869-1176 77-367 (463)
311 cd05094 PTKc_TrkC Catalytic do 100.0 3.9E-33 8.4E-38 298.2 26.4 250 869-1169 5-277 (291)
312 cd05055 PTKc_PDGFR Catalytic d 100.0 3.6E-33 7.8E-38 302.0 26.4 252 865-1169 31-296 (302)
313 cd05073 PTKc_Hck Catalytic dom 100.0 5.9E-33 1.3E-37 291.1 26.9 247 866-1169 3-255 (260)
314 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.7E-33 8E-38 300.1 25.8 255 866-1170 12-292 (304)
315 cd05116 PTKc_Syk Catalytic dom 100.0 3.9E-33 8.4E-38 292.0 25.1 236 876-1169 2-250 (257)
316 cd05045 PTKc_RET Catalytic dom 100.0 5E-33 1.1E-37 296.6 26.2 249 870-1169 1-281 (290)
317 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.9E-33 1.5E-37 300.4 27.3 253 867-1169 10-288 (314)
318 cd05576 STKc_RPK118_like Catal 100.0 8.3E-34 1.8E-38 295.9 19.3 228 880-1173 4-237 (237)
319 cd05060 PTKc_Syk_like Catalyti 100.0 5.7E-33 1.2E-37 290.1 25.5 237 875-1169 1-250 (257)
320 KOG0197 Tyrosine kinases [Sign 100.0 5.3E-34 1.1E-38 328.0 19.2 243 871-1169 208-456 (468)
321 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.1E-33 1.1E-37 304.4 25.9 254 867-1170 10-289 (334)
322 cd05083 PTKc_Chk Catalytic dom 100.0 4.7E-33 1E-37 290.3 24.5 242 869-1169 6-249 (254)
323 cd05097 PTKc_DDR_like Catalyti 100.0 4E-33 8.7E-38 298.6 24.1 258 868-1169 4-291 (295)
324 cd05066 PTKc_EphR_A Catalytic 100.0 7.1E-33 1.5E-37 291.6 25.5 245 869-1169 4-261 (267)
325 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.5E-33 1.4E-37 294.2 25.3 259 868-1169 2-276 (283)
326 cd05065 PTKc_EphR_B Catalytic 100.0 7.7E-33 1.7E-37 291.0 25.2 245 869-1169 4-263 (269)
327 cd05092 PTKc_TrkA Catalytic do 100.0 7E-33 1.5E-37 294.6 25.0 250 869-1169 5-276 (280)
328 cd05046 PTK_CCK4 Pseudokinase 100.0 8.9E-33 1.9E-37 290.8 25.3 252 869-1170 5-272 (275)
329 cd05047 PTKc_Tie Catalytic dom 100.0 9.7E-33 2.1E-37 291.6 25.6 244 876-1169 2-263 (270)
330 KOG1989 ARK protein kinase fam 100.0 1.4E-33 3.1E-38 338.1 21.4 246 868-1170 36-307 (738)
331 cd05111 PTK_HER3 Pseudokinase 100.0 9.6E-33 2.1E-37 294.0 25.5 245 868-1169 6-263 (279)
332 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-32 2.6E-37 289.7 25.1 246 868-1170 5-261 (270)
333 cd05040 PTKc_Ack_like Catalyti 100.0 1.5E-32 3.1E-37 285.9 25.2 240 875-1169 1-253 (257)
334 cd05044 PTKc_c-ros Catalytic d 100.0 7.2E-33 1.6E-37 290.0 23.1 245 876-1169 2-265 (269)
335 KOG4279 Serine/threonine prote 100.0 3.3E-34 7.1E-39 333.1 14.2 249 876-1176 582-838 (1226)
336 cd05041 PTKc_Fes_like Catalyti 100.0 1.6E-32 3.5E-37 284.6 25.4 237 876-1169 2-247 (251)
337 PF07714 Pkinase_Tyr: Protein 100.0 9.8E-33 2.1E-37 292.0 23.9 243 872-1169 2-257 (259)
338 cd05103 PTKc_VEGFR2 Catalytic 100.0 6.5E-33 1.4E-37 306.0 23.4 254 868-1170 6-335 (343)
339 cd05085 PTKc_Fer Catalytic dom 100.0 2.4E-32 5.3E-37 283.1 26.1 238 876-1170 2-247 (250)
340 KOG0983 Mitogen-activated prot 100.0 6.8E-34 1.5E-38 306.6 14.4 253 870-1175 93-354 (391)
341 KOG0586 Serine/threonine prote 100.0 1.5E-33 3.2E-38 328.2 18.1 254 867-1178 54-314 (596)
342 cd05057 PTKc_EGFR_like Catalyt 100.0 3.1E-32 6.6E-37 288.5 26.5 245 868-1169 6-263 (279)
343 KOG0577 Serine/threonine prote 100.0 3E-34 6.5E-39 329.9 11.9 250 871-1176 28-284 (948)
344 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.5E-32 5.4E-37 289.3 25.6 261 869-1169 4-278 (284)
345 cd05043 PTK_Ryk Pseudokinase d 100.0 3.2E-32 6.8E-37 288.0 26.1 251 868-1169 5-271 (280)
346 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.8E-32 3.8E-37 312.7 26.0 253 868-1169 36-392 (400)
347 cd08528 STKc_Nek10 Catalytic d 100.0 2.8E-32 6E-37 286.2 25.4 250 870-1170 1-266 (269)
348 cd05042 PTKc_Aatyk Catalytic d 100.0 2.9E-32 6.3E-37 286.7 25.5 246 876-1169 2-265 (269)
349 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.2E-32 2.6E-37 292.9 22.6 260 870-1170 5-279 (284)
350 cd05115 PTKc_Zap-70 Catalytic 100.0 3.4E-32 7.5E-37 286.5 25.7 237 876-1169 2-250 (257)
351 KOG0669 Cyclin T-dependent kin 100.0 5.5E-35 1.2E-39 312.3 3.9 288 868-1181 16-326 (376)
352 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.8E-33 1.5E-37 290.9 19.5 238 876-1170 2-256 (258)
353 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.5E-32 5.4E-37 283.2 23.3 237 875-1169 1-256 (259)
354 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.8E-32 6.1E-37 286.1 23.9 249 871-1170 1-268 (273)
355 PRK13184 pknD serine/threonine 100.0 3.1E-32 6.8E-37 335.6 27.6 252 869-1169 2-284 (932)
356 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.8E-32 8.2E-37 287.5 24.2 239 876-1170 2-260 (262)
357 KOG0665 Jun-N-terminal kinase 100.0 1.6E-33 3.6E-38 308.8 14.0 287 867-1174 15-314 (369)
358 cd05058 PTKc_Met_Ron Catalytic 100.0 5.8E-32 1.3E-36 282.1 24.8 239 876-1170 2-255 (262)
359 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 7.9E-32 1.7E-36 283.9 25.6 246 876-1169 2-265 (269)
360 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.1E-32 8.8E-37 285.2 23.1 260 869-1169 4-278 (284)
361 KOG2345 Serine/threonine prote 100.0 4.2E-33 9.2E-38 297.8 15.1 253 868-1170 20-296 (302)
362 KOG0584 Serine/threonine prote 100.0 3.5E-33 7.7E-38 325.4 15.7 247 873-1176 44-302 (632)
363 cd05107 PTKc_PDGFR_beta Cataly 100.0 7E-32 1.5E-36 308.1 26.0 254 868-1170 36-395 (401)
364 KOG0614 cGMP-dependent protein 100.0 2.6E-34 5.7E-39 327.0 6.0 252 869-1176 420-683 (732)
365 PLN03225 Serine/threonine-prot 100.0 3.4E-32 7.3E-37 323.8 23.9 275 868-1176 131-456 (566)
366 cd05110 PTKc_HER4 Catalytic do 100.0 1E-31 2.2E-36 289.8 24.7 246 868-1170 6-264 (303)
367 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-31 2.5E-36 286.1 23.9 239 876-1170 2-272 (274)
368 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.1E-31 8.9E-36 279.5 25.2 245 876-1169 2-264 (268)
369 smart00220 S_TKc Serine/Threon 100.0 4.2E-31 9.1E-36 266.3 23.4 238 881-1173 1-244 (244)
370 KOG4721 Serine/threonine prote 100.0 7.4E-33 1.6E-37 317.7 12.0 233 874-1170 129-364 (904)
371 KOG0668 Casein kinase II, alph 100.0 5E-33 1.1E-37 294.5 9.8 281 867-1178 36-330 (338)
372 KOG0695 Serine/threonine prote 100.0 2.1E-32 4.5E-37 300.0 14.7 253 868-1175 249-521 (593)
373 KOG1187 Serine/threonine prote 100.0 1.1E-31 2.3E-36 304.2 19.6 197 869-1078 75-281 (361)
374 KOG0193 Serine/threonine prote 100.0 4.5E-32 9.8E-37 314.8 14.4 249 865-1169 388-648 (678)
375 KOG4645 MAPKKK (MAP kinase kin 100.0 4.2E-33 9.1E-38 341.3 6.1 252 867-1176 1233-1500(1509)
376 KOG1026 Nerve growth factor re 100.0 3.6E-31 7.7E-36 316.9 18.3 250 868-1168 485-756 (774)
377 KOG0587 Traf2- and Nck-interac 100.0 7.4E-31 1.6E-35 313.4 20.2 257 867-1175 17-287 (953)
378 KOG1035 eIF-2alpha kinase GCN2 100.0 4E-31 8.6E-36 323.1 16.2 253 867-1174 477-875 (1351)
379 KOG0664 Nemo-like MAPK-related 100.0 3.4E-32 7.5E-37 293.0 4.5 275 875-1175 59-348 (449)
380 KOG0194 Protein tyrosine kinas 100.0 2.2E-30 4.9E-35 300.7 19.7 248 867-1169 155-415 (474)
381 PLN03224 probable serine/threo 100.0 3.1E-29 6.8E-34 295.1 24.9 276 867-1176 143-506 (507)
382 KOG1167 Serine/threonine prote 100.0 9.2E-31 2E-35 294.9 11.1 294 867-1176 34-387 (418)
383 KOG4250 TANK binding protein k 100.0 1.9E-30 4E-35 305.7 13.3 202 867-1077 11-226 (732)
384 KOG1006 Mitogen-activated prot 100.0 2.3E-31 4.9E-36 286.6 4.1 262 868-1175 63-332 (361)
385 KOG1095 Protein tyrosine kinas 100.0 4.8E-29 1E-33 306.9 22.9 251 868-1169 691-956 (1025)
386 KOG1027 Serine/threonine prote 100.0 2.6E-29 5.7E-34 299.2 11.6 246 874-1174 514-771 (903)
387 PLN00113 leucine-rich repeat r 100.0 4E-28 8.8E-33 301.5 20.0 185 871-1077 692-880 (968)
388 KOG4278 Protein tyrosine kinas 100.0 4.6E-28 1E-32 279.7 17.3 244 871-1169 269-518 (1157)
389 cd00180 PKc Catalytic domain o 100.0 1E-26 2.2E-31 226.9 23.5 208 877-1171 1-215 (215)
390 KOG1094 Discoidin domain recep 100.0 6.8E-28 1.5E-32 278.4 17.0 256 865-1169 534-799 (807)
391 KOG4257 Focal adhesion tyrosin 99.9 6.8E-28 1.5E-32 279.3 15.1 242 871-1169 391-644 (974)
392 KOG1152 Signal transduction se 99.9 3.5E-28 7.5E-33 280.7 11.5 198 869-1077 561-771 (772)
393 KOG0199 ACK and related non-re 99.9 2.7E-27 5.9E-32 276.9 14.9 247 868-1170 109-368 (1039)
394 KOG0984 Mitogen-activated prot 99.9 2.3E-27 4.9E-32 249.1 12.6 214 868-1090 45-268 (282)
395 smart00221 STYKc Protein kinas 99.9 1.6E-25 3.4E-30 225.6 21.9 205 871-1088 1-215 (225)
396 PLN00181 protein SPA1-RELATED; 99.9 3.1E-27 6.8E-32 289.9 10.6 195 932-1176 34-271 (793)
397 KOG0196 Tyrosine kinase, EPH ( 99.9 1.5E-26 3.2E-31 273.8 14.0 245 869-1169 629-886 (996)
398 KOG0576 Mitogen-activated prot 99.9 3.5E-27 7.6E-32 275.8 6.5 257 867-1176 13-277 (829)
399 KOG0200 Fibroblast/platelet-de 99.9 5.5E-25 1.2E-29 264.3 23.2 251 869-1169 296-574 (609)
400 KOG3653 Transforming growth fa 99.9 6.6E-26 1.4E-30 258.4 12.2 267 868-1172 209-507 (534)
401 KOG1345 Serine/threonine kinas 99.9 2.1E-26 4.6E-31 248.9 6.2 257 867-1172 22-289 (378)
402 smart00750 KIND kinase non-cat 99.9 7E-25 1.5E-29 217.9 12.5 167 955-1175 1-170 (176)
403 COG0515 SPS1 Serine/threonine 99.9 1.2E-22 2.5E-27 205.0 27.3 258 871-1177 2-282 (384)
404 KOG1025 Epidermal growth facto 99.9 2.3E-24 4.9E-29 255.9 16.9 241 872-1169 699-952 (1177)
405 KOG2052 Activin A type IB rece 99.9 1.4E-23 3E-28 238.3 16.6 196 858-1070 200-421 (513)
406 KOG1164 Casein kinase (serine/ 99.9 5.6E-22 1.2E-26 219.9 24.1 205 870-1080 19-242 (322)
407 KOG1163 Casein kinase (serine/ 99.9 6.1E-22 1.3E-26 212.0 14.3 213 866-1089 12-238 (341)
408 KOG0590 Checkpoint kinase and 99.9 6.2E-23 1.3E-27 246.3 5.2 266 869-1179 317-594 (601)
409 KOG0606 Microtubule-associated 99.9 4.6E-22 1E-26 242.3 10.4 220 866-1175 80-320 (1205)
410 KOG0603 Ribosomal protein S6 k 99.9 1.1E-22 2.3E-27 239.0 4.1 236 877-1176 2-249 (612)
411 KOG1024 Receptor-like protein 99.9 5.1E-21 1.1E-25 214.7 16.3 250 869-1169 284-550 (563)
412 KOG1165 Casein kinase (serine/ 99.9 3.9E-21 8.6E-26 212.7 15.0 212 866-1088 25-252 (449)
413 PRK09188 serine/threonine prot 99.8 3.3E-20 7.2E-25 211.4 14.9 163 863-1049 12-194 (365)
414 PF14531 Kinase-like: Kinase-l 99.8 3.1E-19 6.8E-24 197.7 15.3 241 871-1161 14-288 (288)
415 KOG1240 Protein kinase contain 99.8 3.5E-20 7.6E-25 226.1 7.4 244 870-1170 24-291 (1431)
416 cd05147 RIO1_euk RIO kinase fa 99.8 1.9E-18 4E-23 179.8 11.7 139 874-1029 2-168 (190)
417 PRK10359 lipopolysaccharide co 99.8 2.3E-18 5.1E-23 185.8 11.6 177 859-1069 21-216 (232)
418 cd05145 RIO1_like RIO kinase f 99.7 2E-17 4.4E-22 170.6 14.6 140 874-1030 2-169 (190)
419 KOG1166 Mitotic checkpoint ser 99.7 1.1E-17 2.4E-22 207.2 12.0 196 866-1073 695-901 (974)
420 PRK12274 serine/threonine prot 99.7 5.8E-17 1.3E-21 173.3 15.9 183 872-1079 5-211 (218)
421 KOG4158 BRPK/PTEN-induced prot 99.7 2.5E-17 5.5E-22 185.7 12.4 189 928-1165 273-505 (598)
422 PRK10345 hypothetical protein; 99.7 6.5E-16 1.4E-20 164.3 15.7 138 875-1025 8-156 (210)
423 smart00090 RIO RIO-like kinase 99.7 4.4E-16 9.6E-21 167.7 12.0 144 871-1030 30-200 (237)
424 PRK14879 serine/threonine prot 99.6 8E-15 1.7E-19 151.0 15.7 132 875-1027 2-143 (211)
425 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.1E-15 2.5E-20 177.7 5.3 176 944-1174 329-516 (516)
426 KOG0195 Integrin-linked kinase 99.6 2.6E-15 5.7E-20 163.4 7.5 242 869-1168 190-440 (448)
427 cd05144 RIO2_C RIO kinase fami 99.5 4E-14 8.7E-19 146.2 13.4 137 871-1029 17-176 (198)
428 TIGR03724 arch_bud32 Kae1-asso 99.5 6.4E-14 1.4E-18 143.3 14.3 129 876-1028 1-139 (199)
429 cd05119 RIO RIO kinase family, 99.5 8.1E-14 1.8E-18 141.0 12.3 138 874-1029 2-165 (187)
430 cd05120 APH_ChoK_like Aminogly 99.5 1.6E-13 3.4E-18 129.5 11.0 134 873-1027 2-138 (155)
431 PRK09605 bifunctional UGMP fam 99.5 2.6E-13 5.7E-18 161.2 15.0 136 868-1028 332-477 (535)
432 KOG0590 Checkpoint kinase and 99.5 4.2E-15 9.2E-20 179.3 -2.0 258 868-1175 19-291 (601)
433 KOG0606 Microtubule-associated 99.4 5.2E-14 1.1E-18 173.1 2.2 259 867-1176 802-1098(1205)
434 KOG1023 Natriuretic peptide re 99.4 1.6E-12 3.5E-17 153.0 11.7 198 928-1169 4-219 (484)
435 PRK01723 3-deoxy-D-manno-octul 99.4 1.1E-11 2.3E-16 134.0 15.3 133 876-1027 38-191 (239)
436 cd05146 RIO3_euk RIO kinase fa 99.2 3.5E-10 7.5E-15 120.2 13.7 139 875-1029 3-175 (197)
437 cd05151 ChoK Choline Kinase (C 99.1 2.9E-10 6.3E-15 112.8 12.1 129 874-1027 3-136 (170)
438 KOG0601 Cyclin-dependent kinas 99.1 5.6E-11 1.2E-15 140.7 7.5 254 866-1176 111-385 (524)
439 PRK04750 ubiB putative ubiquin 99.1 1.5E-10 3.2E-15 138.7 6.4 151 870-1030 121-316 (537)
440 TIGR01982 UbiB 2-polyprenylphe 99.0 1.6E-09 3.4E-14 127.0 12.5 141 875-1029 123-308 (437)
441 KOG0601 Cyclin-dependent kinas 99.0 4.9E-10 1.1E-14 132.8 6.2 254 866-1177 262-521 (524)
442 KOG1266 Protein kinase [Signal 99.0 1E-09 2.2E-14 123.2 8.1 195 930-1175 126-336 (458)
443 KOG1243 Protein kinase [Genera 98.9 2.1E-08 4.6E-13 120.7 14.0 165 887-1071 30-199 (690)
444 cd05154 ACAD10_11_like Acyl-Co 98.8 2.5E-08 5.5E-13 102.4 11.5 142 875-1027 4-206 (223)
445 KOG3741 Poly(A) ribonuclease s 98.8 1.2E-07 2.6E-12 111.8 17.5 169 883-1073 290-474 (655)
446 KOG3087 Serine/threonine prote 98.8 6.9E-08 1.5E-12 102.4 13.2 143 873-1027 11-165 (229)
447 COG3642 Mn2+-dependent serine/ 98.7 7.4E-08 1.6E-12 102.1 12.2 129 876-1028 3-141 (204)
448 PF01163 RIO1: RIO1 family; I 98.6 1.4E-07 3E-12 99.8 10.8 127 884-1029 1-157 (188)
449 KOG2137 Protein kinase [Signal 98.5 3.3E-08 7E-13 119.5 3.1 152 984-1177 107-272 (700)
450 PRK15123 lipopolysaccharide co 98.5 1.6E-06 3.5E-11 96.3 16.1 133 885-1027 38-194 (268)
451 PF06293 Kdo: Lipopolysacchari 98.2 1.6E-05 3.4E-10 84.3 13.4 108 910-1027 56-170 (206)
452 COG0478 RIO-like serine/threon 98.2 5.3E-06 1.1E-10 92.6 10.1 137 871-1028 93-252 (304)
453 PF06176 WaaY: Lipopolysacchar 98.1 3E-05 6.5E-10 84.6 12.7 146 862-1026 24-182 (229)
454 COG1718 RIO1 Serine/threonine 98.0 6.3E-05 1.4E-09 83.4 14.2 139 875-1030 54-218 (268)
455 PRK09902 hypothetical protein; 98.0 0.00014 3E-09 79.1 15.2 141 878-1026 27-178 (216)
456 PF01636 APH: Phosphotransfera 97.9 0.00026 5.7E-09 72.8 15.8 76 874-956 2-80 (239)
457 COG4248 Uncharacterized protei 97.9 5.3E-05 1.2E-09 88.4 11.3 191 874-1077 16-224 (637)
458 TIGR02172 Fb_sc_TIGR02172 Fibr 97.7 0.00035 7.7E-09 75.6 13.3 73 875-956 7-79 (226)
459 cd05150 APH Aminoglycoside 3'- 97.6 0.00065 1.4E-08 72.8 13.1 72 876-956 5-77 (244)
460 COG0661 AarF Predicted unusual 97.6 0.00039 8.5E-09 84.0 11.5 144 875-1030 131-317 (517)
461 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0014 3E-08 70.5 14.3 134 875-1022 7-166 (199)
462 KOG1235 Predicted unusual prot 97.5 0.00074 1.6E-08 81.9 13.1 144 875-1031 167-358 (538)
463 PF13095 FTA2: Kinetochore Sim 97.5 0.0011 2.3E-08 71.9 12.7 129 869-1025 37-206 (207)
464 cd05157 ETNK_euk Ethanolamine 97.4 0.0017 3.8E-08 68.8 12.7 73 874-955 3-76 (235)
465 KOG0576 Mitogen-activated prot 97.4 3.7E-05 8.1E-10 93.2 -0.1 184 872-1077 245-432 (829)
466 cd05155 APH_ChoK_like_1 Unchar 97.3 0.0012 2.7E-08 70.7 10.6 72 875-955 3-78 (235)
467 PLN02876 acyl-CoA dehydrogenas 97.3 0.0018 4E-08 82.1 13.8 80 874-956 43-129 (822)
468 KOG1035 eIF-2alpha kinase GCN2 97.1 0.0094 2E-07 77.0 16.0 195 914-1176 231-440 (1351)
469 KOG2270 Serine/threonine prote 96.9 0.0091 2E-07 69.9 12.5 139 873-1029 148-315 (520)
470 cd05156 ChoK_euk Choline Kinas 96.9 0.0065 1.4E-07 67.3 11.1 72 875-955 4-81 (302)
471 TIGR02721 ycfN_thiK thiamine k 96.7 0.0076 1.6E-07 65.4 10.1 137 877-1027 4-175 (256)
472 PRK05231 homoserine kinase; Pr 96.7 0.028 6.1E-07 62.8 14.6 77 875-956 28-107 (319)
473 PRK10593 hypothetical protein; 96.7 0.033 7.2E-07 62.8 14.9 77 874-956 19-98 (297)
474 COG2112 Predicted Ser/Thr prot 96.7 0.0094 2E-07 63.9 9.8 134 871-1031 24-159 (201)
475 cd05153 HomoserineK_II Homoser 96.7 0.024 5.2E-07 62.5 13.4 147 874-1027 19-205 (296)
476 TIGR00938 thrB_alt homoserine 96.4 0.027 5.9E-07 63.0 12.1 148 874-1027 27-217 (307)
477 PRK09550 mtnK methylthioribose 96.3 0.029 6.4E-07 66.3 12.3 77 874-955 31-115 (401)
478 KOG2268 Serine/threonine prote 96.3 0.003 6.4E-08 72.8 3.8 135 870-1027 93-251 (465)
479 PLN02236 choline kinase 96.2 0.035 7.5E-07 64.0 11.8 143 875-1027 42-231 (344)
480 PLN02421 phosphotransferase, a 96.2 0.03 6.6E-07 63.9 11.3 72 876-956 21-95 (330)
481 PF12260 PIP49_C: Protein-kina 96.0 0.017 3.7E-07 61.4 7.6 101 913-1027 7-111 (188)
482 PF01633 Choline_kinase: Choli 95.7 0.035 7.6E-07 58.7 8.1 53 894-955 2-54 (211)
483 KOG1093 Predicted protein kina 95.4 0.024 5.2E-07 68.6 6.2 91 1054-1176 110-200 (725)
484 cd05152 MPH2' Macrolide 2'-Pho 95.3 0.16 3.5E-06 56.9 12.2 53 877-931 19-71 (276)
485 TIGR02906 spore_CotS spore coa 95.1 0.48 1E-05 52.4 14.9 29 995-1026 187-215 (313)
486 PRK11768 serine/threonine prot 94.8 0.42 9E-06 54.7 13.7 74 880-956 36-112 (325)
487 PF03881 Fructosamin_kin: Fruc 94.3 0.45 9.8E-06 54.1 12.6 75 874-955 22-96 (288)
488 PTZ00384 choline kinase; Provi 94.3 0.31 6.7E-06 57.5 11.5 73 875-956 56-134 (383)
489 TIGR01767 MTRK 5-methylthiorib 94.0 0.38 8.2E-06 56.7 11.2 75 876-955 2-84 (370)
490 PRK06148 hypothetical protein; 93.8 0.76 1.7E-05 60.5 14.7 149 876-1027 32-236 (1013)
491 TIGR02904 spore_ysxE spore coa 93.6 0.58 1.3E-05 52.7 11.5 30 996-1027 197-226 (309)
492 COG2334 Putative homoserine ki 93.2 0.78 1.7E-05 53.3 11.9 142 881-1027 37-228 (331)
493 PTZ00296 choline kinase; Provi 92.6 0.8 1.7E-05 55.1 11.4 74 874-956 110-191 (442)
494 PRK12396 5-methylribose kinase 92.5 0.74 1.6E-05 55.0 10.7 76 874-954 34-116 (409)
495 KOG1826 Ras GTPase activating 92.3 0.14 3E-06 68.4 4.7 143 929-1075 1287-1440(2724)
496 PLN02756 S-methyl-5-thioribose 91.7 1.2 2.5E-05 53.5 11.1 75 874-955 37-119 (418)
497 COG5072 ALK1 Serine/threonine 89.3 1.1 2.3E-05 53.4 7.8 104 943-1062 298-402 (488)
498 COG3173 Predicted aminoglycosi 88.0 4.4 9.5E-05 47.2 11.6 30 996-1027 199-228 (321)
499 COG0510 ycfN Thiamine kinase a 83.6 1.7 3.7E-05 49.0 5.5 48 978-1027 134-183 (269)
500 PF07387 Seadorna_VP7: Seadorn 82.4 5.2 0.00011 45.2 8.3 84 911-1024 104-189 (308)
No 1
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1e-56 Score=523.62 Aligned_cols=320 Identities=48% Similarity=0.797 Sum_probs=291.6
Q ss_pred CcCCCccceeeeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCc
Q 001034 852 GFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKY 931 (1182)
Q Consensus 852 ~fee~~~f~V~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HP 931 (1182)
.+++...|.+..++.+..+|+|++.||+|+||+|.+|.+..|++.||||++++.+.+..+...|+++|..|+...+....
T Consensus 169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~ 248 (586)
T KOG0667|consen 169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY 248 (586)
T ss_pred CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence 44567789999999999999999999999999999999999999999999999999999999999999999977777788
Q ss_pred ceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc
Q 001034 932 HLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS 1011 (1182)
Q Consensus 932 nIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs 1011 (1182)
|||+++++|...+|+|||+|++..+|+++++.++..+ |++..++.|+.||+.||.+||+.+|||+||||+||||..
T Consensus 249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~G----lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~ 324 (586)
T KOG0667|consen 249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRG----LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD 324 (586)
T ss_pred eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc
Confidence 9999999999999999999999999999999998765 999999999999999999999999999999999999998
Q ss_pred CCCceEEEecCCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 001034 1012 YSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1012 ~~dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~il 1091 (1182)
.....|||||||+|++..+..+++++++.|+|||+|+|.+|+.++||||||||++||++|.++|.+.++.++++.|++++
T Consensus 325 ~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~l 404 (586)
T KOG0667|consen 325 PKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVL 404 (586)
T ss_pred CCcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHh
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhcccccchhhcc-cchhhhhhcch----------------hhhhhccc-cccccccCCC-CCcHHHHHHHHH
Q 001034 1092 GPIEQGMLAKGRDTYKYFTK-NHMLYERNQET----------------NRLEYLIP-KKTSLRHRLP-MGDQGFIDFVAH 1152 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k-~~~~~er~~et----------------s~Le~liP-k~~sL~~~l~-~~SeeL~DLIrk 1152 (1182)
|.+|..|+..++.+.++|++ ...+....... ...+...| ....+..... .....|++||.+
T Consensus 405 G~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~ 484 (586)
T KOG0667|consen 405 GLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKR 484 (586)
T ss_pred CCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHH
Confidence 99999999999999999998 44443222221 12344555 5555666665 456789999999
Q ss_pred hcccCCCCCCCHHHHHcCCCCCC
Q 001034 1153 LLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1153 MLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
||.+||.+|+|+.++|+||||+.
T Consensus 485 ~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 485 CLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred HhccCchhcCCHHHHhcCccccc
Confidence 99999999999999999999983
No 2
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.5e-53 Score=488.11 Aligned_cols=338 Identities=23% Similarity=0.345 Sum_probs=262.6
Q ss_pred CCCCCCCCHHHHHhccCCCCccchhHHHhhhHHHHHHhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhhhhHh
Q 001034 766 DSSRDENNANAVRSANSSPSTLSNYEREHVKREEAEKISGMREEDPGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIV 845 (1182)
Q Consensus 766 ~~~~d~~Ssnt~~ra~saK~tIEn~~r~~vk~eeerkir~l~ee~p~a~leeEe~aaiqeq~rqlke~eee~E~~~~kiv 845 (1182)
......+++.|.+++++++++++++|...++...+|++|+...+...+...- ..+...+..+.....+.++-+
T Consensus 60 ~~~~~~~s~~T~~k~~~~k~~ien~Y~~~~~~~~~R~er~~~le~~l~~~~~-s~~~~~~~~~~~~~kEte~lR------ 132 (550)
T KOG0605|consen 60 SEYEFLVSNKTKRKVAAAKQYIENHYSSQIKYLNERKERRKELEEKLASEDV-SEEEQNELLKSLLSKETEYLR------ 132 (550)
T ss_pred cccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cHHHHHHHHHHHhhHHHHHHH------
Confidence 4556678899999999999999999999999999999887777666554311 111112222222222333211
Q ss_pred hcccCCCcCCCccceeeeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCC
Q 001034 846 HRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKH 925 (1182)
Q Consensus 846 ~rkn~~~fee~~~f~V~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~ 925 (1182)
.++.+ +-.++|+++++||+||||+||+|+.+.||+.||||++++........+.+++..+.+.+.
T Consensus 133 ~~R~r---------------~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~ 197 (550)
T KOG0605|consen 133 LRRTR---------------LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE 197 (550)
T ss_pred hcccc---------------CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh
Confidence 11111 134789999999999999999999999999999999999865544444444444444333
Q ss_pred CCCCCcceEEEEEEEEecCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCC
Q 001034 926 DPGDKYHLLRLYDYFYYREHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKP 1004 (1182)
Q Consensus 926 ~~l~HPnIVkL~dsFqd~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKP 1004 (1182)
..++|||+||++|++..++||||||++|+ +..++.... .|++..+++|+.+++.||..||+.|||||||||
T Consensus 198 --~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKP 269 (550)
T KOG0605|consen 198 --VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIHQLGYIHRDIKP 269 (550)
T ss_pred --cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHHHcCcccccCCh
Confidence 25569999999999999999999999975 444444332 299999999999999999999999999999999
Q ss_pred ccEEEccCCCceEEEecCCCccccCC------------------------------C--------------------ccc
Q 001034 1005 ENILVKSYSRCEVKVIDLGSSCFETD------------------------------H--------------------LCS 1034 (1182)
Q Consensus 1005 eNILIDs~~dG~IKLiDFGLA~~~~~------------------------------~--------------------~ss 1034 (1182)
+|+|||. .|+|||+|||||+.... . ..+
T Consensus 270 dNlLiD~--~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~S 347 (550)
T KOG0605|consen 270 DNLLIDA--KGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYS 347 (550)
T ss_pred hheeecC--CCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhc
Confidence 9999994 88999999998742100 0 234
Q ss_pred ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccch
Q 001034 1035 YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHM 1114 (1182)
Q Consensus 1035 ~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~ 1114 (1182)
.+|||.|||||++.+.+|+..||||||||||||||+|++||+++++.+++++|+.+.-.
T Consensus 348 tVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~--------------------- 406 (550)
T KOG0605|consen 348 TVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET--------------------- 406 (550)
T ss_pred ccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh---------------------
Confidence 68999999999999999999999999999999999999999999999999999743211
Q ss_pred hhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q 001034 1115 LYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS---ASDALKHPWLSHP 1176 (1182)
Q Consensus 1115 ~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT---AeELLqHPWFk~~ 1176 (1182)
+..|.. ...+.+++|||.+||+ ||.+|+- ++||.+||||+..
T Consensus 407 ------------l~fP~~-------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v 451 (550)
T KOG0605|consen 407 ------------LKFPEE-------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV 451 (550)
T ss_pred ------------ccCCCc-------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence 111221 1235899999999999 9999975 9999999999875
No 3
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-47 Score=421.11 Aligned_cols=253 Identities=26% Similarity=0.435 Sum_probs=219.5
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
-.++|+++++||+|+||+|++|+.+.+++.||||++++.. ....+..+|..+|..+. ||+||+++..||+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~------hPFiv~l~ysFQt 96 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK------HPFIVKLIYSFQT 96 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC------CCcEeeeEEeccc
Confidence 3578999999999999999999999999999999998764 34567888999999865 4599999999999
Q ss_pred cCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..++|+|++|+.|+ |+..+.... .|++..+++|+.+|+.||.|||++|||||||||+||||+ .+|+|+|+|
T Consensus 97 ~~kLylVld~~~GGeLf~hL~~eg------~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd--~~GHi~LtD 168 (357)
T KOG0598|consen 97 EEKLYLVLDYLNGGELFYHLQREG------RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD--EQGHIKLTD 168 (357)
T ss_pred CCeEEEEEeccCCccHHHHHHhcC------CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec--CCCcEEEec
Confidence 99999999999975 554444332 299999999999999999999999999999999999999 488999999
Q ss_pred CCCccc---cCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1022 LGSSCF---ETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1022 FGLA~~---~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
||+|+. ......+.|||+.|||||++.+.+|+.++||||||+++|+||+|.+||.+.+...++.+|.....+.
T Consensus 169 FgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~---- 244 (357)
T KOG0598|consen 169 FGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPL---- 244 (357)
T ss_pred cccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCC----
Confidence 999974 2345667899999999999999999999999999999999999999999999999998885222110
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC----CHHHHHcCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP----SASDALKHPWLS 1174 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP----TAeELLqHPWFk 1174 (1182)
...-.+.++++||+++|..||++|+ .+.++-+||||.
T Consensus 245 ---------------------------------------~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~ 285 (357)
T KOG0598|consen 245 ---------------------------------------PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFK 285 (357)
T ss_pred ---------------------------------------CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccc
Confidence 1112478999999999999999995 789999999997
Q ss_pred CC
Q 001034 1175 HP 1176 (1182)
Q Consensus 1175 ~~ 1176 (1182)
..
T Consensus 286 ~i 287 (357)
T KOG0598|consen 286 GI 287 (357)
T ss_pred cC
Confidence 53
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-46 Score=436.56 Aligned_cols=254 Identities=29% Similarity=0.515 Sum_probs=226.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEec----cchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN----NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk----~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
.+|...+.||+|||+.||.+++..+|+.||+|++.+ .....+...+|++|.+.|.|+ |||+++.+|++.+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~Hp------nIV~f~~~FEDs~ 91 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHP------NIVQFYHFFEDSN 91 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCC------cEEeeeeEeecCC
Confidence 589999999999999999999999999999999987 445667888999999988765 8999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|||+|+|. ++|..+++.++ .+++.+++.|++||+.||.|||+++|||||||..|||++ .+.+|||+|||
T Consensus 92 nVYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~--~~~~VKIgDFG 163 (592)
T KOG0575|consen 92 NVYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN--ENMNVKIGDFG 163 (592)
T ss_pred ceEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec--CcCcEEecccc
Confidence 9999999999 56666666433 299999999999999999999999999999999999999 47789999999
Q ss_pred CccccC---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1024 SSCFET---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1024 LA~~~~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
+|+... +...+.||||.|+|||++....++..+||||+|||||.||+|+|||...+..+++.+|...
T Consensus 164 LAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~---------- 233 (592)
T KOG0575|consen 164 LATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN---------- 233 (592)
T ss_pred eeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc----------
Confidence 998766 5567899999999999999999999999999999999999999999999999999998411
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
++.+|. ..+.++++||++||+.||.+|||+.+||.|+||+..+.|-
T Consensus 234 -------------------------~Y~~P~---------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~ 279 (592)
T KOG0575|consen 234 -------------------------EYSMPS---------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPA 279 (592)
T ss_pred -------------------------Cccccc---------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCC
Confidence 222332 3468899999999999999999999999999998887763
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-47 Score=427.46 Aligned_cols=260 Identities=29% Similarity=0.486 Sum_probs=217.0
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch--------hhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--------FFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--------~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
.+.+.|.+.+.||.|+||.|.+|..+.+|+.||||++.+... ......+|+++|+.|+|+ +||+++
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP------~IV~~~ 242 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHP------NIVRIK 242 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCC------CEEEEe
Confidence 356779999999999999999999999999999999986531 223457899999999765 899999
Q ss_pred EEEEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC-CCc
Q 001034 938 DYFYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY-SRC 1015 (1182)
Q Consensus 938 dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~-~dG 1015 (1182)
++|....+.||||||++| .|.+++..+.. +.+...+.+++||+.||.|||++||+||||||+|||+... .++
T Consensus 243 d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~------l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 243 DFFEVPDSSYMVLEYVEGGELFDKVVANKY------LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred eeeecCCceEEEEEEecCccHHHHHHhccc------cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcce
Confidence 999999999999999995 68888876653 6777889999999999999999999999999999999864 568
Q ss_pred eEEEecCCCccccC--CCcccccCCCcccchhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHh
Q 001034 1016 EVKVIDLGSSCFET--DHLCSYVQSRSYRAPEVILGLS---YDKKIDIWSLGCILAELCTGNVLFQNDSPAT-LLARVIG 1089 (1182)
Q Consensus 1016 ~IKLiDFGLA~~~~--~~~ss~vGTp~YmAPEVLlg~~---yS~kSDIWSLGVILYELLTGr~PF~g~d~~e-lLakIv~ 1089 (1182)
.+||+|||+|++.. .-..+.||||.|.|||++.+.. +..++|+|||||+||-||+|++||....... +..+|.+
T Consensus 317 llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~ 396 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK 396 (475)
T ss_pred EEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence 99999999999874 3467899999999999998765 3458899999999999999999998754433 5555532
Q ss_pred hcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1090 IIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1090 ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
....+- ......+++++++||.+||..||+.|||+.|||+
T Consensus 397 G~y~f~----------------------------------------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYAFG----------------------------------------PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred Cccccc----------------------------------------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 111110 0112245789999999999999999999999999
Q ss_pred CCCCCCCC
Q 001034 1170 HPWLSHPY 1177 (1182)
Q Consensus 1170 HPWFk~~~ 1177 (1182)
||||+...
T Consensus 437 hpW~~~~~ 444 (475)
T KOG0615|consen 437 HPWFKDAP 444 (475)
T ss_pred Chhhhccc
Confidence 99998543
No 6
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=406.19 Aligned_cols=251 Identities=25% Similarity=0.464 Sum_probs=225.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|++++.||.|+||+|.+++++.+|..||+|++.+.. .+.++..+|..+|+.+.| |++++|++.|.+.
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~------PFlv~l~~t~~d~ 116 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH------PFLVKLYGTFKDN 116 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC------ceeEEEEEeeccC
Confidence 468999999999999999999999999999999998764 456788889999998864 4999999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++||||||++| -|..+++..+. |++..+++|++||+.||+|||+++|++|||||+|||||. +|+|||+||
T Consensus 117 ~~lymvmeyv~GGElFS~Lrk~~r------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~--~G~iKitDF 188 (355)
T KOG0616|consen 117 SNLYMVMEYVPGGELFSYLRKSGR------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQ--NGHIKITDF 188 (355)
T ss_pred CeEEEEEeccCCccHHHHHHhcCC------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeecc--CCcEEEEec
Confidence 999999999996 47777776543 999999999999999999999999999999999999994 889999999
Q ss_pred CCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1023 GSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1023 GLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
|+|+.....+.+.||||.|+|||++...+|+.++|||+|||++|||++|++||.+.++..++.+|+..--.+|
T Consensus 189 GFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP------- 261 (355)
T KOG0616|consen 189 GFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP------- 261 (355)
T ss_pred cceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC-------
Confidence 9999998889999999999999999999999999999999999999999999999999999999963322222
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC-----CCHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR-----PSASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR-----PTAeELLqHPWFk~~ 1176 (1182)
+-.+..+++||+++|+.|-.+| ...++|..||||+..
T Consensus 262 -------------------------------------~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 262 -------------------------------------SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred -------------------------------------cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 1236889999999999999999 467799999999864
No 7
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-47 Score=428.98 Aligned_cols=283 Identities=30% Similarity=0.525 Sum_probs=244.0
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhH--HHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFD--QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~d--q~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.+.+||.++++||.|+||.||+|+.+.++..||||.+++.-...+ .-++|++.|++++. |||||+|++++.+.
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~-----hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNP-----HPNIIKLKEVIRDN 81 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCC-----CCcchhhHHHhhcc
Confidence 456899999999999999999999999999999999987532222 35689999999872 45999999999998
Q ss_pred C-eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 E-HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e-~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
. ++|+|||||..+|+++++.+.. .|++..++.|++||++||.|+|++|+.||||||+|||+.. ...|||+||
T Consensus 82 ~~~L~fVfE~Md~NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~--~~~iKiaDF 154 (538)
T KOG0661|consen 82 DRILYFVFEFMDCNLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG--NDVIKIADF 154 (538)
T ss_pred CceEeeeHHhhhhhHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc--cceeEeccc
Confidence 7 9999999999999999997743 3999999999999999999999999999999999999984 667999999
Q ss_pred CCccccC--CCcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1023 GSSCFET--DHLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1023 GLA~~~~--~~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
|+|+-.. .+.+.++.|++|+|||+++.. -|+.++|+|++|||++|+.+-++.|.+.+..+.+.+|..++|.+....+
T Consensus 155 GLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 155 GLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred ccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 9998543 346678999999999999764 6899999999999999999999999999999999999999998876555
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccc--cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKK--TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~--~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
..+. .....+++..|.. ..+...++..+.++.+||.+||.|||.+||||.|+|+||||+..
T Consensus 235 ~eg~----------------~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 235 PEGY----------------NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred hhHH----------------HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 4432 2223444444443 35566777889999999999999999999999999999999865
No 8
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-45 Score=418.42 Aligned_cols=251 Identities=24% Similarity=0.419 Sum_probs=223.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
.+|.+++.||.|+|++|++|.++.+++.|||||+.+.- .....+..|..+|.+|. .||.|++||..|++..
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-----~hPgivkLy~TFQD~~ 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-----GHPGIVKLYFTFQDEE 147 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-----CCCCeEEEEEEeeccc
Confidence 57899999999999999999999999999999997642 22345667888899886 4669999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+|+|+||++ |.|+++++.... |.+..+++|+.||+.||+|||++|||||||||+||||+ ++++|||+|||
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gs------fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd--~dmhikITDFG 219 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGS------FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD--KDGHIKITDFG 219 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCc------chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc--CCCcEEEeecc
Confidence 9999999999 689999987643 99999999999999999999999999999999999999 58899999999
Q ss_pred CccccCCC----------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 001034 1024 SSCFETDH----------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARV 1087 (1182)
Q Consensus 1024 LA~~~~~~----------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakI 1087 (1182)
.|+.+... ..+++||..|.+||++.....+..+|+|+||||||+|+.|.+||.+.++.-++++|
T Consensus 220 sAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI 299 (604)
T KOG0592|consen 220 SAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKI 299 (604)
T ss_pred ccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence 98754321 14589999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHH
Q 001034 1088 IGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDA 1167 (1182)
Q Consensus 1088 v~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeEL 1167 (1182)
+.+-.++|.. .++.+++||+++|..||.+|+|+.+|
T Consensus 300 ~~l~y~fp~~--------------------------------------------fp~~a~dLv~KLLv~dp~~Rlt~~qI 335 (604)
T KOG0592|consen 300 QALDYEFPEG--------------------------------------------FPEDARDLIKKLLVRDPSDRLTSQQI 335 (604)
T ss_pred HHhcccCCCC--------------------------------------------CCHHHHHHHHHHHccCccccccHHHH
Confidence 8665555442 24788999999999999999999999
Q ss_pred HcCCCCCCC
Q 001034 1168 LKHPWLSHP 1176 (1182)
Q Consensus 1168 LqHPWFk~~ 1176 (1182)
.+||||...
T Consensus 336 k~HpFF~~V 344 (604)
T KOG0592|consen 336 KAHPFFEGV 344 (604)
T ss_pred hhCcccccC
Confidence 999999865
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.5e-46 Score=402.45 Aligned_cols=280 Identities=26% Similarity=0.456 Sum_probs=245.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|+.+.++|+|+||.|++|+++.||+.||||.+...+ ....-.++|+++|+++.|+ |+|.|+.+|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~------NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHE------NLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccc------hHHHHHHHHHhcce
Confidence 57889999999999999999999999999999997653 3456678999999999766 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++||+||++.++++.+..... | ++...++.|++|++.|+.|||++++|||||||+||||.. +|.+||||||+|
T Consensus 76 lhLVFE~~dhTvL~eLe~~p~--G---~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~--~gvvKLCDFGFA 148 (396)
T KOG0593|consen 76 LHLVFEYCDHTVLHELERYPN--G---VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ--NGVVKLCDFGFA 148 (396)
T ss_pred eEEEeeecchHHHHHHHhccC--C---CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec--CCcEEeccchhh
Confidence 999999999998888877653 2 889999999999999999999999999999999999994 888999999999
Q ss_pred cccC---CCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1026 CFET---DHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1026 ~~~~---~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+.+. +..+.++.|++|+|||++.+ .+|+..+|||++||++.||++|.+.|.+.+..+++-.|+..+|++...-.
T Consensus 149 R~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq-- 226 (396)
T KOG0593|consen 149 RTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQ-- 226 (396)
T ss_pred HhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHH--
Confidence 8765 33557899999999999998 68999999999999999999999999999999999999999998654221
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccc-cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKK-TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~-~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
.++..++....+..+.|.. .++...++..+.-+++|+.+||..||.+|++.+++|.||||..
T Consensus 227 ------------~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 227 ------------SIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred ------------HHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 2233445555666655554 4678888999999999999999999999999999999999943
No 10
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=9.4e-44 Score=409.12 Aligned_cols=300 Identities=28% Similarity=0.501 Sum_probs=237.1
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-CeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~-e~L 946 (1182)
.++|+++++||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+.....|++|++++++|... .++
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 5789999999999999999999999999999999976555555667899999999888777788899999999865 589
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCC------------
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYS------------ 1013 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~------------ 1013 (1182)
||||+++.++|++++.... .+++..++.|+.||+.||.|||+ .|||||||||+|||++..+
T Consensus 208 ~iv~~~~g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 208 CIVMPKYGPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred EEEEeccCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 9999999999998876542 28889999999999999999997 6999999999999998532
Q ss_pred --CceEEEecCCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 001034 1014 --RCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1014 --dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~il 1091 (1182)
.+.+||+|||++..........+||+.|+|||++.+..|+.++||||||||||||++|++||.+.+..+.+..|...+
T Consensus 282 ~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~ 361 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL 361 (467)
T ss_pred CCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence 135999999998766655667789999999999999999999999999999999999999999999999999999999
Q ss_pred CCcchhhhhccccc--chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1092 GPIEQGMLAKGRDT--YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s--~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
|.+|..+....... ..++........... ...+.... ....+ .....+..+.+||.+||++||.+||||.|||+
T Consensus 362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~--~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTD-PKHLARIA-RARPV--REVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred CCCCHHHHhhccchhHHHHhhhcccccccCC-HHHHHhhh-cccch--hhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 99988776432110 111111111000000 00000000 00000 00112577999999999999999999999999
Q ss_pred CCCCCCCC
Q 001034 1170 HPWLSHPY 1177 (1182)
Q Consensus 1170 HPWFk~~~ 1177 (1182)
||||...+
T Consensus 438 Hp~~~~~~ 445 (467)
T PTZ00284 438 HPYVLKYY 445 (467)
T ss_pred CccccccC
Confidence 99998754
No 11
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-44 Score=402.03 Aligned_cols=256 Identities=29% Similarity=0.434 Sum_probs=216.5
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEec--cchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN--NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk--~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
...+.+.++.||+|+.|+||+|+++.|++.+|+|++.. +.....++.+|+++++.++++ +||.+|+.|....
T Consensus 77 ~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~sp------yIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 77 SLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSP------YIVGFYGAFYSNG 150 (364)
T ss_pred CHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCC------CeeeEeEEEEeCC
Confidence 34567778899999999999999999999999999943 456678899999999998544 9999999999998
Q ss_pred -eEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEec
Q 001034 945 -HLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 945 -~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
.++|+||||+|+ |..+++... .+++..+..++.+|++||.|||. .+||||||||+||||++ +|+|||||
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNs--kGeVKicD 222 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNS--KGEVKICD 222 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeecc--CCCEEecc
Confidence 499999999965 555544332 28999999999999999999995 99999999999999995 88999999
Q ss_pred CCCccccCC-CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHhhcCCcc
Q 001034 1022 LGSSCFETD-HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQND-----SPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1022 FGLA~~~~~-~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~-----d~~elLakIv~ilGp~P 1095 (1182)
||.+..... ..++++||..|||||.+.+..|+.++||||||+.++||++|++||... +..+++..|+ .+++|
T Consensus 223 FGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv--~~ppP 300 (364)
T KOG0581|consen 223 FGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIV--DEPPP 300 (364)
T ss_pred ccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHh--cCCCC
Confidence 999976544 457899999999999999999999999999999999999999999764 5555555553 11222
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
. .|. ...+++|++||..||++||.+||++.|||+|||++.
T Consensus 301 ~--------------------------------lP~--------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~ 340 (364)
T KOG0581|consen 301 R--------------------------------LPE--------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKK 340 (364)
T ss_pred C--------------------------------CCc--------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhh
Confidence 1 000 135899999999999999999999999999999987
Q ss_pred CCC
Q 001034 1176 PYE 1178 (1182)
Q Consensus 1176 ~~e 1178 (1182)
...
T Consensus 341 ~~~ 343 (364)
T KOG0581|consen 341 FED 343 (364)
T ss_pred ccc
Confidence 644
No 12
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-45 Score=408.99 Aligned_cols=319 Identities=35% Similarity=0.645 Sum_probs=269.8
Q ss_pred cCCCccceeeeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcc
Q 001034 853 FEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYH 932 (1182)
Q Consensus 853 fee~~~f~V~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPn 932 (1182)
-+....+....++.+.++|.|++.||.|.||.|..+.+..++..|||||++.-..+.+..+-|+.+|+++++..+.....
T Consensus 73 dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~r 152 (415)
T KOG0671|consen 73 DDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFR 152 (415)
T ss_pred CCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceE
Confidence 34556688899999999999999999999999999999999999999999998888899999999999999887766668
Q ss_pred eEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC
Q 001034 933 LLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY 1012 (1182)
Q Consensus 933 IVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~ 1012 (1182)
+|++.++|....|.|||+|.++-+++++++.+.. .+|+...++.|++||+.++.|||+.+++|.||||+|||+.+.
T Consensus 153 cv~m~~wFdyrghiCivfellG~S~~dFlk~N~y----~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 153 CVQMRDWFDYRGHICIVFELLGLSTFDFLKENNY----IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSS 228 (415)
T ss_pred EEeeehhhhccCceEEEEeccChhHHHHhccCCc----cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEecc
Confidence 9999999999999999999999999999986544 459999999999999999999999999999999999998531
Q ss_pred ------------------CCceEEEecCCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001034 1013 ------------------SRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVL 1074 (1182)
Q Consensus 1013 ------------------~dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~P 1074 (1182)
....|+|+|||.|++..+...+.+.|..|+|||++++.+|+.+|||||+||||+||.+|...
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~L 308 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETL 308 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeecccee
Confidence 13469999999999999988999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCC---CCcHHHHHHHH
Q 001034 1075 FQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLP---MGDQGFIDFVA 1151 (1182)
Q Consensus 1075 F~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~---~~SeeL~DLIr 1151 (1182)
|+.++..++++.|-.++||+|..|..... ..++|......+..........+....-..+...+. .....|.|||+
T Consensus 309 FqtHen~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~ 387 (415)
T KOG0671|consen 309 FQTHENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLR 387 (415)
T ss_pred cccCCcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHH
Confidence 99999999999999999999999987764 445555443333222222212221111122222222 22357999999
Q ss_pred HhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1152 HLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1152 kMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+||.+||.+|+|+.|||.||||+..
T Consensus 388 ~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 388 RMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred HHHccCccccccHHHHhcCHHhhcC
Confidence 9999999999999999999999865
No 13
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.4e-43 Score=375.46 Aligned_cols=276 Identities=26% Similarity=0.433 Sum_probs=224.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|+++... .......+|+.+++.+.| |||+++++++.....+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~ 78 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH------ANIVTLHDIIHTERCL 78 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC------CCEeeEEEEEcCCCeE
Confidence 57999999999999999999999999999999997542 223456789999988865 4899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.++|..++..... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 79 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~DfG~~~ 151 (288)
T cd07871 79 TLVFEYLDSDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE--KGELKLADFGLAR 151 (288)
T ss_pred EEEEeCCCcCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEECcCccee
Confidence 99999999999888765432 2788899999999999999999999999999999999984 6789999999986
Q ss_pred ccCC---CcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETD---HLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~---~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
.... ......+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.++...+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07871 152 AKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGI 231 (288)
T ss_pred eccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcc
Confidence 5432 2234567999999999876 56899999999999999999999999999999999999988888776665432
Q ss_pred cccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.....+. ....|. ........+..+.++++||.+||++||.+|||+.|+|+||||
T Consensus 232 ~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 232 TSNEEFR----------------SYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred ccchhhh----------------ccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 2111110 001111 111112234567899999999999999999999999999998
No 14
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-44 Score=396.64 Aligned_cols=284 Identities=33% Similarity=0.546 Sum_probs=240.5
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEec---cchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk---~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+..+|..++.||.|+||.|+.|.++.+|+.||||.+.. ........++|+++|++++|. ||+.+++++.-+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~He------NIi~l~di~~p~ 93 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHE------NIIGLLDIFRPP 93 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCC------CcceEEeecccc
Confidence 34567778999999999999999999999999999873 345567889999999999765 899999998762
Q ss_pred -----CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 944 -----EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 944 -----e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
+.+|+|+|+|+.+|...++..+. ++...++.+++||++||.|+|+.+|+||||||.|+|++ .++.+|
T Consensus 94 ~~~~f~DvYiV~elMetDL~~iik~~~~------L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n--~~c~lK 165 (359)
T KOG0660|consen 94 SRDKFNDVYLVFELMETDLHQIIKSQQD------LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN--ADCDLK 165 (359)
T ss_pred cccccceeEEehhHHhhHHHHHHHcCcc------ccHHHHHHHHHHHHHhcchhhcccccccccchhheeec--cCCCEE
Confidence 57999999999999998886653 88999999999999999999999999999999999999 488899
Q ss_pred EecCCCccccC-----CCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1019 VIDLGSSCFET-----DHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1019 LiDFGLA~~~~-----~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|+|||+|+... ...+.++.|.+|+|||+++. ..|+.++||||+||||.|||+|++.|.+.+...++..|+..+|
T Consensus 166 I~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 166 ICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred eccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 99999998773 34467889999999999864 5799999999999999999999999999999999999999999
Q ss_pred Ccchhhhhccccc--chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1093 PIEQGMLAKGRDT--YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1093 p~PeemL~~~k~s--~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.+++..+...... ..+. -+...-........+++.++.+++||.+||.+||.+|+||+|+|+|
T Consensus 246 tP~~e~l~~i~s~~ar~yi---------------~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYI---------------KSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCHHHHHHhccHHHHHHH---------------HhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 9887776543211 0110 0111111234456678889999999999999999999999999999
Q ss_pred CCCCCCCCC
Q 001034 1171 PWLSHPYEP 1179 (1182)
Q Consensus 1171 PWFk~~~eP 1179 (1182)
|||+.-..|
T Consensus 311 PYl~~~hdp 319 (359)
T KOG0660|consen 311 PYLAPYHDP 319 (359)
T ss_pred hhhhhhcCC
Confidence 999876554
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.3e-43 Score=380.73 Aligned_cols=282 Identities=30% Similarity=0.511 Sum_probs=242.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch---hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD---FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~---~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.+|..++.||+|.||.||+|++..+|+.||||.++..+. .....++|+++|+.+.|+ ||+.|+++|-....
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~------nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHP------NIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCc------chhhhhhhccCCCc
Confidence 578889999999999999999999999999999986542 245678999999999765 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+.||+|||+.+|...++... ..++...++.|+.++++||+|||++.|+||||||.|+||++ +|.+||+|||++
T Consensus 76 l~lVfEfm~tdLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~--~g~lKiADFGLA 148 (318)
T KOG0659|consen 76 LSLVFEFMPTDLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS--DGQLKIADFGLA 148 (318)
T ss_pred eEEEEEeccccHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC--CCcEEeecccch
Confidence 99999999999998887543 45999999999999999999999999999999999999995 888999999999
Q ss_pred cccCCCc---ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1026 CFETDHL---CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1026 ~~~~~~~---ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+...... ...+-|.+|+|||++.|. .|+..+|+||+|||+.||+-|.+.|.+.+..+++..|...+|.+....|..
T Consensus 149 r~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~ 228 (318)
T KOG0659|consen 149 RFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPE 228 (318)
T ss_pred hccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcc
Confidence 9765432 233789999999999886 599999999999999999999999999999999999999999887766665
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
......|. .+. ..| ..++...++..+.+++||+.+||.+||.+|+|+.|+|+||||+...-|
T Consensus 229 ~~~lpdY~--------------~~~-~~P-~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p 290 (318)
T KOG0659|consen 229 MTSLPDYV--------------KIQ-QFP-KPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP 290 (318)
T ss_pred ccccccHH--------------HHh-cCC-CCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence 54433321 111 112 223444778889999999999999999999999999999999975444
No 16
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.3e-42 Score=368.21 Aligned_cols=278 Identities=26% Similarity=0.482 Sum_probs=222.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|++.+.||.|+||.||+|+++.+++.||||++.... .....+.+|+.+++.++|+ ||++++++|.....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~~ 74 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE------NIVELKEAFRRRGK 74 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc------cccchhhhEecCCE
Confidence 47999999999999999999999999999999997542 2345667888988888654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||+.++++..+..... .+++..++.++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~--~~~~kl~Dfg~~ 147 (287)
T cd07848 75 LYLVFEYVEKNMLELLEEMPN-----GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH--NDVLKLCDFGFA 147 (287)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEEeeccCc
Confidence 999999999988877654321 2888899999999999999999999999999999999984 678999999998
Q ss_pred cccCCC----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1026 CFETDH----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1026 ~~~~~~----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
...... .....+++.|+|||++.+..++.++|||||||++|+|++|++||.+.+....+..+....++++...+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07848 148 RNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKL 227 (287)
T ss_pred ccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHh
Confidence 764322 2245789999999999999999999999999999999999999999888888888888888877654432
Q ss_pred ccccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
......+ ......... ...........+..+.+||.+||++||++|||+.++|+||||
T Consensus 228 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 228 FYSNPRF--------------HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred hhccchh--------------cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1110000 000000000 000011223467899999999999999999999999999998
No 17
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-43 Score=413.85 Aligned_cols=256 Identities=26% Similarity=0.430 Sum_probs=222.3
Q ss_pred CceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 864 NSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 864 g~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
+.+-.++|.++++||+|+||+|+++..+.+++.||||++++.. +..+....|.+|+...+ .||+|+.|+..
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----~HPFL~~L~~~ 437 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----RHPFLVNLFSC 437 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----cCCeEeecccc
Confidence 3445688999999999999999999999999999999999864 55667778888888776 57899999999
Q ss_pred EEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 940 FYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
||..+|+|+||||+.|+.. ++.... ..|++..+++|+++|+.||.|||++||||||||.+|||+|. .|++||
T Consensus 438 fQT~~~l~fvmey~~Ggdm-~~~~~~-----~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~--eGh~ki 509 (694)
T KOG0694|consen 438 FQTKEHLFFVMEYVAGGDL-MHHIHT-----DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDT--EGHVKI 509 (694)
T ss_pred cccCCeEEEEEEecCCCcE-EEEEec-----ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcc--cCcEEe
Confidence 9999999999999998772 222111 13999999999999999999999999999999999999995 889999
Q ss_pred ecCCCccc---cCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1020 IDLGSSCF---ETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1020 iDFGLA~~---~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
+|||+++- ....++++||||.|||||++.+..|+.++|||||||+|||||+|..||.+++.++++..|+..-.
T Consensus 510 ADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~---- 585 (694)
T KOG0694|consen 510 ADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV---- 585 (694)
T ss_pred cccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC----
Confidence 99999974 45567899999999999999999999999999999999999999999999999999999851100
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHcCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-----SDALKHP 1171 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-----eELLqHP 1171 (1182)
.....++.++.++|++||..+|++|+-+ .+|.+||
T Consensus 586 ----------------------------------------~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hp 625 (694)
T KOG0694|consen 586 ----------------------------------------RYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHP 625 (694)
T ss_pred ----------------------------------------CCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCC
Confidence 0112457899999999999999999875 7899999
Q ss_pred CCCCC
Q 001034 1172 WLSHP 1176 (1182)
Q Consensus 1172 WFk~~ 1176 (1182)
||...
T Consensus 626 FFr~i 630 (694)
T KOG0694|consen 626 FFRSI 630 (694)
T ss_pred ccccC
Confidence 99763
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-44 Score=405.10 Aligned_cols=282 Identities=28% Similarity=0.470 Sum_probs=238.8
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
..+.|+.+++||+|+||.||+|++..+|+.||+|.++.+. ....-..+|+.||++|.|+ ||++|.+.....
T Consensus 115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~Hp------NIikL~eivt~~ 188 (560)
T KOG0600|consen 115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHP------NIIKLEEIVTSK 188 (560)
T ss_pred chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCC------cccceeeEEEec
Confidence 3567899999999999999999999999999999998653 4455677999999999766 899999999887
Q ss_pred --CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 944 --EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 944 --e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..+|||+|||+.+|.-++... .+.|++.+++.|++||+.||+|||.+||+|||||..||||| .+|.+||+|
T Consensus 189 ~~~siYlVFeYMdhDL~GLl~~p-----~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid--n~G~LKiaD 261 (560)
T KOG0600|consen 189 LSGSIYLVFEYMDHDLSGLLSSP-----GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID--NNGVLKIAD 261 (560)
T ss_pred CCceEEEEEecccchhhhhhcCC-----CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc--CCCCEEecc
Confidence 689999999999888776542 34499999999999999999999999999999999999999 588999999
Q ss_pred CCCccccCC----CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1022 LGSSCFETD----HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1022 FGLA~~~~~----~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
||+|++... ..+..+-|.+|+|||+++|. .|+.++|+||+||||.||++|++.|.+.+..+++.+|..++|.+.+
T Consensus 262 FGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e 341 (560)
T KOG0600|consen 262 FGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTE 341 (560)
T ss_pred ccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCCh
Confidence 999996443 24566789999999999987 5999999999999999999999999999999999999999999888
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
..|.. .+.. ....+....+....+...+...+..+++|+..||..||.+|.||.++|+|+||+..
T Consensus 342 ~~W~~-~kLP--------------~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 342 DYWPV-SKLP--------------HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred hcccc-ccCC--------------cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 76652 1111 11122222333344455567778999999999999999999999999999999443
No 19
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.4e-42 Score=370.47 Aligned_cols=285 Identities=25% Similarity=0.372 Sum_probs=218.3
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.++|++.+.||.|+||.||+|+++.+++.||||++.... .......+|+.+++.+.| |||+++++++.....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~ 77 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH------ANIVLLHDIIHTKET 77 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC------CCcCeEEEEEecCCe
Confidence 468999999999999999999999999999999997543 223356778899888865 489999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||+.++|..++..... .+++..++.++.||+.||.|||+.||+||||||+|||++. .+.+||+|||++
T Consensus 78 ~~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~ 150 (303)
T cd07869 78 LTLVFEYVHTDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISD--TGELKLADFGLA 150 (303)
T ss_pred EEEEEECCCcCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECCCCcc
Confidence 999999999999888765432 2788899999999999999999999999999999999984 678999999998
Q ss_pred cccCC---CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETD---HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQND-SPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~---~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~-d~~elLakIv~ilGp~PeemL~ 1100 (1182)
..... .....++++.|+|||++.+. .++.++|||||||++|+|++|.+||.+. +....+..+...++.+....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred eeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 65332 22345779999999998764 5889999999999999999999999874 4556667776666655443322
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
...... .+... .+....+............+..+.+||.+||++||++|||+.+||+||||+...
T Consensus 231 ~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 231 GVHSLP-HFKPE-----------RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred chhhcc-ccccc-----------cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 211100 00000 000000100000000112457899999999999999999999999999998864
No 20
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-43 Score=395.66 Aligned_cols=321 Identities=34% Similarity=0.591 Sum_probs=274.3
Q ss_pred CCcCCCccceeeeCceec-CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCC--C
Q 001034 851 TGFEEDKNFHVVLNSVIA-GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHD--P 927 (1182)
Q Consensus 851 ~~fee~~~f~V~ig~iL~-drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~--~ 927 (1182)
..|....+.+|.+++++. +||.+.++||.|.|++||+|.|..+.++|||||.+....+.+..+.|+++|++++..+ .
T Consensus 59 ~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~ 138 (590)
T KOG1290|consen 59 EDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPND 138 (590)
T ss_pred hhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 345567788999999999 9999999999999999999999999999999999999999999999999999998766 3
Q ss_pred CCCcceEEEEEEEEec----CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCcccccc
Q 001034 928 GDKYHLLRLYDYFYYR----EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDL 1002 (1182)
Q Consensus 928 l~HPnIVkL~dsFqd~----e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDI 1002 (1182)
....+||+|++.|... .|+|+|+|+++.+|+.++++....+ ++...++.|++||+.||.|||. +||||.||
T Consensus 139 ~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrG----lpl~~VK~I~~qvL~GLdYLH~ecgIIHTDl 214 (590)
T KOG1290|consen 139 PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRG----LPLSCVKEICRQVLTGLDYLHRECGIIHTDL 214 (590)
T ss_pred CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCC----CcHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence 4456899999999875 7999999999999999999887765 8999999999999999999995 79999999
Q ss_pred CCccEEEcc-----------------------------------------------------------------------
Q 001034 1003 KPENILVKS----------------------------------------------------------------------- 1011 (1182)
Q Consensus 1003 KPeNILIDs----------------------------------------------------------------------- 1011 (1182)
||+|||+..
T Consensus 215 KPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~ 294 (590)
T KOG1290|consen 215 KPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGI 294 (590)
T ss_pred CcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccc
Confidence 999999720
Q ss_pred -------------------------------------------C------------------------------------
Q 001034 1012 -------------------------------------------Y------------------------------------ 1012 (1182)
Q Consensus 1012 -------------------------------------------~------------------------------------ 1012 (1182)
.
T Consensus 295 ~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~ 374 (590)
T KOG1290|consen 295 EEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTI 374 (590)
T ss_pred cccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccc
Confidence 0
Q ss_pred --------------CCceEEEecCCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-
Q 001034 1013 --------------SRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN- 1077 (1182)
Q Consensus 1013 --------------~dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g- 1077 (1182)
.+..|||.|||-||....+.+.-++|+.|+|||++++.+|+..+||||++||+|||+||..+|..
T Consensus 375 ~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePh 454 (590)
T KOG1290|consen 375 ASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPH 454 (590)
T ss_pred ccccccCCCCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCC
Confidence 00137899999999988888888999999999999999999999999999999999999999954
Q ss_pred -----CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCC---CCCcHHHHHH
Q 001034 1078 -----DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRL---PMGDQGFIDF 1149 (1182)
Q Consensus 1078 -----~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l---~~~SeeL~DL 1149 (1182)
...+++++.||.++|.+|..+...++.+..+|++.+.+.... ++.++. ....|...+ .....+|.+|
T Consensus 455 sG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~----~LK~Wp-L~~VL~eKY~~s~e~A~~fsdF 529 (590)
T KOG1290|consen 455 SGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIR----RLKPWP-LYEVLIEKYEWSEEDAQQFSDF 529 (590)
T ss_pred CCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceeccc----ccCCCc-HHHHHHHHhCCCHHHHHHHHHH
Confidence 346789999999999999999999999999999887664321 111111 111111111 2234689999
Q ss_pred HHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1150 VAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1150 IrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
|.-||+++|++||||.++|+||||.....|+
T Consensus 530 L~PmLef~PeKR~tA~~cl~hPwLn~~~~~~ 560 (590)
T KOG1290|consen 530 LSPMLEFDPEKRPTAAQCLKHPWLNPVAGPP 560 (590)
T ss_pred HHHHHhcCccccccHHHHhcCccccCCCCCc
Confidence 9999999999999999999999999877664
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-42 Score=390.41 Aligned_cols=254 Identities=28% Similarity=0.470 Sum_probs=219.9
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
...++|.+.+.||.|+||+|++|++..+++.||+|++.+.. .....+.+|+.+++.+.+ ||||++++.+
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~-----HpnI~~l~ev 88 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS-----HPNIIRLLEV 88 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc-----CCCEeEEEEE
Confidence 45689999999999999999999999999999999887641 123455679999999873 3499999999
Q ss_pred EEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 940 FYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
+....++||||||+.| .|++++.... .+.+..++++++||+.||+|||++||+||||||+|||++... +.+|
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~-~~~K 161 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNE-GNLK 161 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCC-CCEE
Confidence 9999999999999996 8999888632 288999999999999999999999999999999999999632 8899
Q ss_pred EecCCCcccc---CCCcccccCCCcccchhhhcCCC-CC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1019 VIDLGSSCFE---TDHLCSYVQSRSYRAPEVILGLS-YD-KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1019 LiDFGLA~~~---~~~~ss~vGTp~YmAPEVLlg~~-yS-~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
|+|||++... .....+.|||+.|+|||++.+.. |+ .++||||+|||||.|++|+.||...+...++.+|....-.
T Consensus 162 l~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 162 LSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK 241 (370)
T ss_pred EeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc
Confidence 9999999876 34567899999999999999987 86 8999999999999999999999998888888776422111
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCC-cHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMG-DQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~-SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
+|. .. +.++++||++||..||.+|+|+.+++.|||
T Consensus 242 -----------------------------------~p~---------~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w 277 (370)
T KOG0583|consen 242 -----------------------------------IPS---------YLLSPEARSLIEKMLVPDPSTRITLLEILEHPW 277 (370)
T ss_pred -----------------------------------CCC---------CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChh
Confidence 121 12 789999999999999999999999999999
Q ss_pred CCC
Q 001034 1173 LSH 1175 (1182)
Q Consensus 1173 Fk~ 1175 (1182)
|+.
T Consensus 278 ~~~ 280 (370)
T KOG0583|consen 278 FQK 280 (370)
T ss_pred hcc
Confidence 997
No 22
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.3e-42 Score=370.47 Aligned_cols=282 Identities=29% Similarity=0.497 Sum_probs=222.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--- 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--- 943 (1182)
+|++.+.||+|+||.||+|++..+++.||||++... ......+.+|+.+++.++|+ ||+++++++...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hp------niv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHP------DIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCC------CEeeecceEeccCCC
Confidence 699999999999999999999999999999998743 12234567899998888654 899999988643
Q ss_pred --CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 944 --EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 944 --e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..+|+||||+.++|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kL~D 146 (338)
T cd07859 75 EFKDIYVVFELMESDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANA--DCKLKICD 146 (338)
T ss_pred CCceEEEEEecCCCCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEcc
Confidence 3589999999999888876443 2889999999999999999999999999999999999984 77899999
Q ss_pred CCCccccCCC------cccccCCCcccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1022 LGSSCFETDH------LCSYVQSRSYRAPEVILG--LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1022 FGLA~~~~~~------~ss~vGTp~YmAPEVLlg--~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
||++...... ....++|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+...++.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~ 226 (338)
T cd07859 147 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT 226 (338)
T ss_pred CccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCC
Confidence 9998753221 134578999999999876 67899999999999999999999999998888888888888887
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
++........... .... ...+.... .......++..+..+.+||.+||+.||.+|||+.+||+||||
T Consensus 227 ~~~~~~~~i~~~~-----~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f 293 (338)
T cd07859 227 PSPETISRVRNEK-----ARRY------LSSMRKKQ--PVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293 (338)
T ss_pred CCHHHHHHhhhhh-----HHHH------HHhhcccC--CCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence 7665443321100 0000 00000001 111223345667899999999999999999999999999999
Q ss_pred CCCCC
Q 001034 1174 SHPYE 1178 (1182)
Q Consensus 1174 k~~~e 1178 (1182)
+....
T Consensus 294 ~~~~~ 298 (338)
T cd07859 294 KGLAK 298 (338)
T ss_pred hhcCc
Confidence 76543
No 23
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.8e-42 Score=377.80 Aligned_cols=302 Identities=32% Similarity=0.554 Sum_probs=229.4
Q ss_pred cceeeeCc---eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCc
Q 001034 858 NFHVVLNS---VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKY 931 (1182)
Q Consensus 858 ~f~V~ig~---iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HP 931 (1182)
.|++..+. .+.++|++++.||.|+||.||+|.+..+++.||+|++... ........+|+.+++.++| |
T Consensus 7 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~ 80 (359)
T cd07876 7 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH------K 80 (359)
T ss_pred cceecccchhhhhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCC------C
Confidence 34445544 4678999999999999999999999999999999999653 2334566778888887754 4
Q ss_pred ceEEEEEEEEecC------eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCc
Q 001034 932 HLLRLYDYFYYRE------HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPE 1005 (1182)
Q Consensus 932 nIVkL~dsFqd~e------~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPe 1005 (1182)
||++++++|.... .+|+||||+.+++...+.. .+++..+..++.||+.||.|||++||+||||||+
T Consensus 81 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~ 152 (359)
T cd07876 81 NIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 152 (359)
T ss_pred CEeeeeeeeccCCCccccceeEEEEeCCCcCHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 8999999987543 5799999999998877642 1778889999999999999999999999999999
Q ss_pred cEEEccCCCceEEEecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATL 1083 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~el 1083 (1182)
|||++. ++.+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....
T Consensus 153 NIl~~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~ 230 (359)
T cd07876 153 NIVVKS--DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ 230 (359)
T ss_pred HEEECC--CCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 999984 678999999998754322 3345789999999999999999999999999999999999999999988888
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccccc--ccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKT--SLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~--sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
+..++..++.++..++.........+......+. ...+....+... .........+..+++||.+||++||++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 306 (359)
T cd07876 231 WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYP----GISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKR 306 (359)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCC----CcchhhhccccccccccccccccchhHHHHHHHHhccCcccC
Confidence 8888888887766554332211111100000000 000011111110 0111122346789999999999999999
Q ss_pred CCHHHHHcCCCCCCCCCC
Q 001034 1162 PSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1162 PTAeELLqHPWFk~~~eP 1179 (1182)
||+.|||+||||+.-+.|
T Consensus 307 ~t~~e~l~hp~~~~~~~~ 324 (359)
T cd07876 307 ISVDEALRHPYITVWYDP 324 (359)
T ss_pred CCHHHHhcCchhhhhcCc
Confidence 999999999999864444
No 24
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.7e-42 Score=363.24 Aligned_cols=279 Identities=28% Similarity=0.446 Sum_probs=218.1
Q ss_pred CCEEEEEEeccCCceEEEEEEECC-CCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe--
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLH-TGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY-- 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~-TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd-- 942 (1182)
.+|++++.||+|+||.||+|++.. +++.||+|+++... .......+|+.+++.+... .||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~hpniv~~~~~~~~~~ 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF---EHPNVVRLFDVCTVSR 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhccc---CCCCcceEEEEEeccc
Confidence 479999999999999999999854 57889999987542 2233556778877777543 57899999999863
Q ss_pred ---cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 943 ---REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 943 ---~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
...+++||||+.++|..++...... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||
T Consensus 78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~--~~~~kl 151 (290)
T cd07862 78 TDRETKLTLVFEHVDQDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS--SGQIKL 151 (290)
T ss_pred CCCCCcEEEEEccCCCCHHHHHHhCCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcC--CCCEEE
Confidence 3569999999999998888654322 2788999999999999999999999999999999999984 678999
Q ss_pred ecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1020 IDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1020 iDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..|+...+.+...
T Consensus 152 ~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 152 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred ccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999998754332 334578999999999999999999999999999999999999999999989999998777644332
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.+........ ..+. .-....+....+..+..+.+||.+||++||++|||+.++|+||||
T Consensus 232 ~~~~~~~~~~---------------~~~~--~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 232 DWPRDVALPR---------------QAFH--SKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hchhhhcccc---------------hhcc--CCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 2211100000 0000 000011112234567899999999999999999999999999998
No 25
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.3e-41 Score=359.94 Aligned_cols=278 Identities=28% Similarity=0.445 Sum_probs=219.4
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--- 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--- 943 (1182)
+|++++.||+|+||.||+|.++.+++.||+|+++... ........|+.+++.+.+. .||||++++++|...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAF---DHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhc---CCCCeeeeeeeeccccCC
Confidence 5899999999999999999999999999999987532 1223456788888877543 478999999998753
Q ss_pred --CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 944 --EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 944 --e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..+++||||+.++|..++...... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~kl~d 151 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPPP----GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS--GGQVKLAD 151 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECc
Confidence 468999999999988887654321 2889999999999999999999999999999999999984 67799999
Q ss_pred CCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1022 LGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1022 FGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
||++...... .....+++.|+|||++.+..++.++|||||||++|+|++|++||........+.++....+.+....+
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 152 FGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 9998765432 23456789999999999999999999999999999999999999998888888888877665433222
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
........ . .+............+..+..+.+||.+||++||.+|||+.++|.||||
T Consensus 232 ~~~~~~~~---------------~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 232 PRDVTLPR---------------G--AFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccccccc---------------c--ccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 11000000 0 000000111222334567889999999999999999999999999998
No 26
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.1e-42 Score=379.81 Aligned_cols=287 Identities=25% Similarity=0.399 Sum_probs=240.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
.+.|+.+..|+.|+||.||+|+++.+++.||+|.++-++ .+.-..++|+.+|..++|+ |||.+..+..-.
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~------NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHP------NIVEVKEVVVGSN 148 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCC------CeeeeEEEEeccc
Confidence 367999999999999999999999999999999997543 2233567899999988755 899999987754
Q ss_pred -CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 -EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 -e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+.+||||||+..+|..++..... .|...+++.++.|++.||.|||.+.|+||||||+|+|+. ..|.+||+||
T Consensus 149 ~d~iy~VMe~~EhDLksl~d~m~q-----~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~--~~G~lKiaDF 221 (419)
T KOG0663|consen 149 MDKIYIVMEYVEHDLKSLMETMKQ-----PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS--HKGILKIADF 221 (419)
T ss_pred cceeeeeHHHHHhhHHHHHHhccC-----CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec--cCCcEEeccc
Confidence 67999999999999998887652 389999999999999999999999999999999999999 4788999999
Q ss_pred CCccccCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1023 GSSCFETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1023 GLA~~~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
|+|+....+ .+..+-|.+|+|||++++. .|+.++|+||+|||+.||+++++.|.+.+..+++.+|...+|.+.+.+
T Consensus 222 GLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~i 301 (419)
T KOG0663|consen 222 GLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAI 301 (419)
T ss_pred chhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCcccc
Confidence 999987766 5667889999999999986 599999999999999999999999999999999999999999988877
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCC--cHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMG--DQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~--SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
|..-...... ..+.+.......++..++.. +....+|+..+|.+||.+|.||.++|+|+||.+.
T Consensus 302 wpg~~~lp~~--------------k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 302 WPGYSELPAV--------------KKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred CCCccccchh--------------hccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 7643222110 01111111122334444443 4899999999999999999999999999999998
Q ss_pred CCCCC
Q 001034 1177 YEPIS 1181 (1182)
Q Consensus 1177 ~eP~~ 1181 (1182)
+.|++
T Consensus 368 P~p~~ 372 (419)
T KOG0663|consen 368 PLPID 372 (419)
T ss_pred CCCCC
Confidence 88765
No 27
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.7e-42 Score=366.61 Aligned_cols=249 Identities=22% Similarity=0.333 Sum_probs=212.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||+|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+.| |||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~ 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH------PFIIRLFWTEHDQR 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC------CcHhhhHhhhccCC
Confidence 46999999999999999999999999999999997542 234456778888888865 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|+||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~--~~~~kl~Dfg 146 (291)
T cd05612 75 FLYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK--EGHIKLTDFG 146 (291)
T ss_pred eEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEEecC
Confidence 99999999985 6777776443 2788899999999999999999999999999999999984 6789999999
Q ss_pred CccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1024 SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1024 LA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
++..........+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.....+
T Consensus 147 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~---------- 216 (291)
T cd05612 147 FAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE---------- 216 (291)
T ss_pred cchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC----------
Confidence 9987666556678999999999999999999999999999999999999999988877766666411100
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSH 1175 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~ 1175 (1182)
+ ....+..+++||++||+.||.+||+ +.++++||||+.
T Consensus 217 -------------------------~---------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 259 (291)
T cd05612 217 -------------------------F---------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKS 259 (291)
T ss_pred -------------------------C---------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccC
Confidence 0 1123678999999999999999995 999999999975
No 28
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.9e-41 Score=372.11 Aligned_cols=301 Identities=30% Similarity=0.519 Sum_probs=229.4
Q ss_pred ceeeeCc---eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcc
Q 001034 859 FHVVLNS---VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYH 932 (1182)
Q Consensus 859 f~V~ig~---iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPn 932 (1182)
|++..+. .+.++|++++.||+|+||.||+|.+..+++.||||++... ........+|+.+++.+.|+ |
T Consensus 4 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------n 77 (355)
T cd07874 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK------N 77 (355)
T ss_pred eeeccCchhhhhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCC------c
Confidence 3444444 3568999999999999999999999999999999999753 23345666788888887654 8
Q ss_pred eEEEEEEEEec------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCcc
Q 001034 933 LLRLYDYFYYR------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPEN 1006 (1182)
Q Consensus 933 IVkL~dsFqd~------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeN 1006 (1182)
|++++++|... ..+|+||||+.+++...+.. .++...++.++.||+.||.|||+.||+||||||+|
T Consensus 78 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~N 149 (355)
T cd07874 78 IISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 149 (355)
T ss_pred hhceeeeeeccccccccceeEEEhhhhcccHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHH
Confidence 99999998754 35799999999998877642 17788899999999999999999999999999999
Q ss_pred EEEccCCCceEEEecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001034 1007 ILVKSYSRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLL 1084 (1182)
Q Consensus 1007 ILIDs~~dG~IKLiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elL 1084 (1182)
||++. ++.+||+|||+++..... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+
T Consensus 150 ill~~--~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 227 (355)
T cd07874 150 IVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 227 (355)
T ss_pred EEECC--CCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99984 678999999999765433 23467899999999999999999999999999999999999999999888888
Q ss_pred HHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccc--cccccCCCCCcHHHHHHHHHhcccCCCCCC
Q 001034 1085 ARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKK--TSLRHRLPMGDQGFIDFVAHLLEINPKKRP 1162 (1182)
Q Consensus 1085 akIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~--~sL~~~l~~~SeeL~DLIrkMLq~DPekRP 1162 (1182)
..++..++.+...++.........+......+.. ..+....+.. ..........+..+++||.+||++||++||
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rp 303 (355)
T cd07874 228 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG----LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303 (355)
T ss_pred HHHHHHhCCCCHHHHHhhcHHHHHHHhcCCcccc----ccchhhccccccccccccccccchHHHHHHHHHhcCCchhcC
Confidence 8888877766554444332221111111000000 0000000000 000111223467899999999999999999
Q ss_pred CHHHHHcCCCCCCCCCC
Q 001034 1163 SASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1163 TAeELLqHPWFk~~~eP 1179 (1182)
|+.|||+||||+..++|
T Consensus 304 s~~ell~hp~~~~~~~~ 320 (355)
T cd07874 304 SVDEALQHPYINVWYDP 320 (355)
T ss_pred CHHHHhcCcchhcccCh
Confidence 99999999999876554
No 29
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.3e-41 Score=362.15 Aligned_cols=282 Identities=25% Similarity=0.392 Sum_probs=226.1
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|.+.+.||.|+||.||+|.++.+++.||+|+++... .......+|+.+++.++| +||+++++++....++
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~ 79 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH------ANIVTLHDIVHTDKSL 79 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC------CCcceEEEEEeeCCeE
Confidence 67999999999999999999999999999999987543 223356678888888865 4899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.+++..++..... .+++..++.++.||+.||.|||++||+||||||+|||++. .+.+||+|||++.
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~ 152 (309)
T cd07872 80 TLVFEYLDKDLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (309)
T ss_pred EEEEeCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECccccce
Confidence 99999999998888765432 2788889999999999999999999999999999999984 6789999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..++..++.++...+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07872 153 AKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGI 232 (309)
T ss_pred ecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhh
Confidence 53322 233467899999999875 46899999999999999999999999999998999999888887766554432
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.....+.. ..+.......+....+.++.++++||.+||++||.+|||+.|+|+||||+...
T Consensus 233 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 233 SSNDEFKN--------------YNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred cchhhhhh--------------hhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 21111100 00000001111223345688999999999999999999999999999999754
No 30
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-41 Score=372.52 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=214.0
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|++.+.||.|+||.||+|+++.+++.||||++.+.. .....+.+|+.+++.+.| |||++++++|...
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~ 90 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH------PFIVNMMCSFQDE 90 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC------CCCCcEEEEEEcC
Confidence 478999999999999999999999999999999997643 234567788888888865 4899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++|+||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~kl~Df 162 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDN--KGHVKVTDF 162 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECC--CCCEEEeec
Confidence 999999999985 6777665432 2788899999999999999999999999999999999984 678999999
Q ss_pred CCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1023 GSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1023 GLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
|++..........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.....+
T Consensus 163 g~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--------- 233 (329)
T PTZ00263 163 GFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLK--------- 233 (329)
T ss_pred cCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcC---------
Confidence 99987766666778999999999999999999999999999999999999999988877766665311000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSH 1175 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~ 1175 (1182)
+| ..++..+.+||.+||+.||.+||+ +.+|+.||||+.
T Consensus 234 --------------------------~p---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 234 --------------------------FP---------NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred --------------------------CC---------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 01 124678999999999999999997 799999999986
No 31
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.3e-41 Score=388.72 Aligned_cols=284 Identities=26% Similarity=0.468 Sum_probs=221.2
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec----
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR---- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~---- 943 (1182)
..+|++++.||+|+||.||+|.+..+++.||||++..... ...+|+.+++.+.|+ ||++++++|...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~------niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLNHI------NIIFLKDYYYTECFKK 135 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcCCC------CCcceeeeEeeccccc
Confidence 4679999999999999999999999999999999876543 234688898888654 899999887542
Q ss_pred ----CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 944 ----EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 944 ----e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
..+++||||+++++..++....... ..+++..++.++.||+.||.|||+++||||||||+|||++. ..+.+||
T Consensus 136 ~~~~~~l~lvmE~~~~~l~~~~~~~~~~~--~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~-~~~~vkL 212 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQTVHKYMKHYARNN--HALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP-NTHTLKL 212 (440)
T ss_pred CCCceEEEEEEecCCccHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC-CCCceee
Confidence 2578999999999888876543222 23889999999999999999999999999999999999984 3346999
Q ss_pred ecCCCccccCC--CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1020 IDLGSSCFETD--HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1020 iDFGLA~~~~~--~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
+|||+++.... .....++|+.|+|||++.+. .|+.++|||||||+||+|++|++||.+.+..+.+.+++..++.++.
T Consensus 213 ~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 213 CDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred eccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 99999975432 33456789999999998764 6999999999999999999999999999999999999988887765
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
..+......+..+. +. ......+...+ ....+.++++||.+||++||.+|||+.|+|+||||...
T Consensus 293 ~~~~~~~~~~~~~~-----~~-~~~~~~l~~~~---------p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 293 DQLKEMNPNYADIK-----FP-DVKPKDLKKVF---------PKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHHHhchhhhccc-----CC-ccCchhHHHHh---------ccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence 44432211100000 00 00000011111 12356899999999999999999999999999999765
Q ss_pred CC
Q 001034 1177 YE 1178 (1182)
Q Consensus 1177 ~e 1178 (1182)
..
T Consensus 358 ~~ 359 (440)
T PTZ00036 358 RD 359 (440)
T ss_pred hc
Confidence 43
No 32
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.9e-41 Score=371.43 Aligned_cols=293 Identities=31% Similarity=0.526 Sum_probs=225.6
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.++|++.+.||+|+||.||+|.+..+++.||||++... ........+|+.+++.+.| +||++++++|...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH------KNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCC------CCccccceeeccc
Confidence 468999999999999999999999999999999999753 2334556778888887755 4899999987643
Q ss_pred ------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 944 ------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 944 ------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
..+|+||||+.+++...+.. .++...+..++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 96 ~~~~~~~~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~ 165 (364)
T cd07875 96 KSLEEFQDVYIVMELMDANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS--DCTL 165 (364)
T ss_pred ccccccCeEEEEEeCCCCCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECC--CCcE
Confidence 35899999999998887642 1678889999999999999999999999999999999984 6789
Q ss_pred EEecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1018 KVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.+++..++.++
T Consensus 166 kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred EEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99999999765433 2345789999999999999999999999999999999999999999999999999988888766
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccc--cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKK--TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~--~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
..++.........+......+.. .......+.. ..........+..+++||.+||++||.+|||+.+||+||||
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~ 321 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAG----YSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 321 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCC----CChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence 55544332221111100000000 0000001100 00111122346789999999999999999999999999999
Q ss_pred CCCCCC
Q 001034 1174 SHPYEP 1179 (1182)
Q Consensus 1174 k~~~eP 1179 (1182)
..-+.|
T Consensus 322 ~~~~~~ 327 (364)
T cd07875 322 NVWYDP 327 (364)
T ss_pred ccccCc
Confidence 865444
No 33
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=4.7e-43 Score=398.60 Aligned_cols=317 Identities=35% Similarity=0.604 Sum_probs=273.2
Q ss_pred CCccceeeeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceE
Q 001034 855 EDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLL 934 (1182)
Q Consensus 855 e~~~f~V~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIV 934 (1182)
...+|.+.+++++..+|.+....|+|-|++|.+|.+..-|..||||||++++.....-+.|+.||+.|+...+....|++
T Consensus 418 aEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 418 AEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred ccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 45689999999999999999999999999999999999999999999999988888899999999999999888889999
Q ss_pred EEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC
Q 001034 935 RLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR 1014 (1182)
Q Consensus 935 kL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d 1014 (1182)
+|+..|...+|+|||+|.+..+|.+.++..... +-|.+..++.|+.||+.||..|-.+||+|.||||+|||++. +.
T Consensus 498 rl~r~F~hknHLClVFE~LslNLRevLKKyG~n---vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE-~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRN---VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE-SK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhhhchHHHHHHHhCcc---cceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc-Cc
Confidence 999999999999999999999999999876543 33888999999999999999999999999999999999996 56
Q ss_pred ceEEEecCCCccccCCC-cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1015 CEVKVIDLGSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1015 G~IKLiDFGLA~~~~~~-~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
..+||||||.|.+.... .+.+.-+..|.|||+++|.+|+...|+||+||+||||.||+..|.+.++-.++..+|.+.|+
T Consensus 574 ~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk 653 (752)
T KOG0670|consen 574 NILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK 653 (752)
T ss_pred ceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence 68999999999876554 55667788999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhcccccchhhcccchhhhhhcc-------hhhhhhccccccc---cc--cCCC----CCcHHHHHHHHHhcccC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQE-------TNRLEYLIPKKTS---LR--HRLP----MGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~e-------ts~Le~liPk~~s---L~--~~l~----~~SeeL~DLIrkMLq~D 1157 (1182)
+|..|+..+...-..|+++...+....- ...+....|.... +. +.++ ..-..|++||.+||..|
T Consensus 654 ~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 654 FPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred CcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 9999999887766677776554321111 1122233332211 11 1111 22367999999999999
Q ss_pred CCCCCCHHHHHcCCCCCC
Q 001034 1158 PKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1158 PekRPTAeELLqHPWFk~ 1175 (1182)
|++|.|..++|+||||+.
T Consensus 734 P~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 734 PEKRITVNQALKHPFITE 751 (752)
T ss_pred hhhcCCHHHHhcCCcccC
Confidence 999999999999999986
No 34
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-41 Score=381.05 Aligned_cols=285 Identities=21% Similarity=0.328 Sum_probs=220.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
..+|++++.||+|+||.||+|.+..+++.||||.... ....+|+.+++.++| |||++++++|......|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~H------pnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAINH------PSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCCC------CCCCCEeEEEEECCeeE
Confidence 4679999999999999999999999999999997643 345789999999865 48999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+|||++.++|+.++.... .+++..++.++.||+.||.|||++||+||||||+|||++. .+.+||+|||+++.
T Consensus 160 lv~e~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~--~~~vkL~DFG~a~~ 231 (391)
T PHA03212 160 LILPRYKTDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINH--PGDVCLGDFGAACF 231 (391)
T ss_pred EEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcC--CCCEEEEeCCcccc
Confidence 999999999888876542 2788899999999999999999999999999999999984 67899999999865
Q ss_pred cCC----CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-------CHHHHHHHHHhhcCCcch
Q 001034 1028 ETD----HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQND-------SPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1028 ~~~----~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~-------d~~elLakIv~ilGp~Pe 1096 (1182)
... .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||... .....+..++..+|..|.
T Consensus 232 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~ 311 (391)
T PHA03212 232 PVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPN 311 (391)
T ss_pred cccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChh
Confidence 322 233467999999999999999999999999999999999999887542 345667778877887665
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+......... . .+.. ........+............+.++.+||.+||++||.+||||.|||+||||+..
T Consensus 312 ~~~~~~~~~~~---~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 312 EFPIDAQANLD---E---IYIG---LAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hcCcchhHHHH---H---HHHH---HHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 44321110000 0 0000 0000000011000011112345789999999999999999999999999999987
Q ss_pred CCCC
Q 001034 1177 YEPI 1180 (1182)
Q Consensus 1177 ~eP~ 1180 (1182)
..|.
T Consensus 383 ~~~~ 386 (391)
T PHA03212 383 PDPY 386 (391)
T ss_pred CCCC
Confidence 6654
No 35
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-42 Score=379.49 Aligned_cols=281 Identities=29% Similarity=0.509 Sum_probs=233.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--C--
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--E-- 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e-- 944 (1182)
-.|.-.+++|+|+||.||+|+...+++.||||..-.++... ..|+.+|+.+. |||||+|..+|... .
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~------HpNIV~L~~~f~~~~~~d~ 94 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLD------HPNIVRLLYFFSSSTESDE 94 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcC------CcCeeeEEEEEEecCCCch
Confidence 35888999999999999999999999999999987776543 36888888664 55999999999864 2
Q ss_pred -eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 -HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 -~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++.+|||||+.+|+.+++.....+ ..++...++.+++||++||.|||+.||+||||||.|||+|. ..|.+||||||
T Consensus 95 ~~lnlVleymP~tL~~~~r~~~~~~--~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-~tg~LKicDFG 171 (364)
T KOG0658|consen 95 VYLNLVLEYMPETLYRVIRHYTRAN--QRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-DTGVLKICDFG 171 (364)
T ss_pred hHHHHHHHhchHHHHHHHHHHhhcC--CCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-CCCeEEeccCC
Confidence 578999999999999998642222 23788889999999999999999999999999999999996 67899999999
Q ss_pred CccccC--CCcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1024 SSCFET--DHLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1024 LA~~~~--~~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
+|+.+. ++..++.-|+.|+|||++.+. .|+.++||||.||++.||+-|++.|.+.+..+++..|++++|.+..+-..
T Consensus 172 SAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 172 SAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred cceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHh
Confidence 998643 445677889999999999886 69999999999999999999999999999999999999999998876655
Q ss_pred cccccchhhcccchhhhhhcchhhhhhcccccc--cc-ccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKT--SL-RHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~--sL-~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.....+. +...|... .+ .......++++.+|+.++|+++|.+|.++.|+|.||||...-
T Consensus 252 ~mn~~y~------------------~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 252 SMNPNYT------------------EFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred hcCcccc------------------cccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence 4433221 11111111 11 123456789999999999999999999999999999998766
Q ss_pred CC
Q 001034 1178 EP 1179 (1182)
Q Consensus 1178 eP 1179 (1182)
+|
T Consensus 314 ~~ 315 (364)
T KOG0658|consen 314 DP 315 (364)
T ss_pred Cc
Confidence 55
No 36
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.6e-41 Score=374.05 Aligned_cols=289 Identities=32% Similarity=0.457 Sum_probs=239.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch---hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC-
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD---FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE- 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~---~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e- 944 (1182)
..|..+++||.|+||+||+|+.+.+|+.||+|.++.... ......+|+.+|+.++|.+ ||+.|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~-----~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHAN-----HIVRLHDVIHTSNN 85 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCc-----ceEEEEeeeeeccc
Confidence 346667789999999999999999999999999987644 4456789999999999873 3999999999887
Q ss_pred -----eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 945 -----HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 945 -----~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
.+++||||+.-+|..++....... ..++...++.+++||+.||.|||+++|+||||||.||||++ .|.+||
T Consensus 86 ~~~~~~l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~--~G~lKl 161 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS--SGVLKL 161 (323)
T ss_pred ccccceEEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC--CCcEee
Confidence 899999999999999998876431 12666889999999999999999999999999999999995 888999
Q ss_pred ecCCCccccC---CCcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1020 IDLGSSCFET---DHLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1020 iDFGLA~~~~---~~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
+|||+|+... ......+.|.+|+|||++.+. .|+...||||+|||++||+++++.|.+.+..+++.+|...+|.+.
T Consensus 162 aDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 162 ADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred eccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 9999997543 224566889999999999987 699999999999999999999999999999999999999999988
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
+..|..-.....+-. .+. ..+....+....+..+....+|+.+||+++|.+|.||..+|.||||.+
T Consensus 242 e~~Wp~v~~~~~~k~----~f~----------~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKA----PFP----------KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred ccCCCCccccccccc----cCc----------CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 766654332222110 000 001112333444555678999999999999999999999999999998
Q ss_pred CCCCC
Q 001034 1176 PYEPI 1180 (1182)
Q Consensus 1176 ~~eP~ 1180 (1182)
..++.
T Consensus 308 ~~~~~ 312 (323)
T KOG0594|consen 308 LPEKS 312 (323)
T ss_pred cccch
Confidence 86654
No 37
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-40 Score=369.01 Aligned_cols=253 Identities=22% Similarity=0.351 Sum_probs=207.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||+|+||+||+|.++.+++.||||++++.. .....+..|+.++..+. |++|+++++.|....
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~------~~~iv~~~~~~~~~~ 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD------SLWVVKMFYSFQDKL 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC------CCCcceEEEEEecCC
Confidence 46999999999999999999999999999999997642 23345667888888775 458999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.| +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~--~~~vkL~DFG 146 (363)
T cd05628 75 NLYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS--KGHVKLSDFG 146 (363)
T ss_pred eEEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCCEEEeecc
Confidence 99999999985 6777665432 2889999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCC--------------------------------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHH
Q 001034 1024 SSCFETDH--------------------------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCIL 1065 (1182)
Q Consensus 1024 LA~~~~~~--------------------------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVIL 1065 (1182)
+++..... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 98643211 1245799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHH
Q 001034 1066 AELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQG 1145 (1182)
Q Consensus 1066 YELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~See 1145 (1182)
|+|++|++||.+.+..+.+.+++.....+ .+|. ....+.+
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~~---------------------------------~~p~-------~~~~s~~ 266 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKETL---------------------------------IFPP-------EVPISEK 266 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCcc---------------------------------cCCC-------cCCCCHH
Confidence 99999999999988888777775221110 0111 1124688
Q ss_pred HHHHHHHhcccCCC---CCCCHHHHHcCCCCCCC
Q 001034 1146 FIDFVAHLLEINPK---KRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1146 L~DLIrkMLq~DPe---kRPTAeELLqHPWFk~~ 1176 (1182)
+++||.+||. +|. .||++.+|++||||+..
T Consensus 267 ~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 267 AKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 9999999876 454 45899999999999764
No 38
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=6.2e-41 Score=367.29 Aligned_cols=283 Identities=30% Similarity=0.531 Sum_probs=225.1
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
.++|++++.||.|+||.||+|.+..+++.||||++.... .....+.+|+.+|+.+.|+ ||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHE------NVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCC------chhhhhhhhcccc
Confidence 478999999999999999999999999999999997542 2234566788888888654 899999888643
Q ss_pred -----CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 944 -----EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 944 -----e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
...|++|+++.++|..++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~--~~~~k 158 (343)
T cd07878 88 SIENFNEVYLVTNLMGADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE--DCELR 158 (343)
T ss_pred cccccCcEEEEeecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC--CCCEE
Confidence 457999999988887766432 2889999999999999999999999999999999999984 67899
Q ss_pred EecCCCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1019 VIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1019 LiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
|+|||++..........++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+.++....+.++..
T Consensus 159 l~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 159 ILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238 (343)
T ss_pred EcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 9999999877666667789999999999987 568999999999999999999999999988888888888877766554
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
++........ .......+. ...+.......++.+.+||.+||++||.+|||+.+||+||||..
T Consensus 239 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 239 VLKKISSEHA---------------RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHHhcchhhH---------------HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 4332211000 000000000 01112223345678999999999999999999999999999987
Q ss_pred CCCCC
Q 001034 1176 PYEPI 1180 (1182)
Q Consensus 1176 ~~eP~ 1180 (1182)
...|.
T Consensus 304 ~~~~~ 308 (343)
T cd07878 304 YHDPE 308 (343)
T ss_pred cCCCc
Confidence 65543
No 39
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.3e-40 Score=364.04 Aligned_cols=258 Identities=25% Similarity=0.342 Sum_probs=215.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||.|+||.||+|++..+++.||||++++.. .....+..|+.++..+.| |||++++++|....
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~iv~~~~~~~~~~ 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS------EWLVKLLYAFQDDE 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC------CCCccEEEEEEcCC
Confidence 46999999999999999999999999999999998643 234456778888887754 49999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.| +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. .+.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kL~Dfg 146 (333)
T cd05600 75 YLYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA--SGHIKLTDFG 146 (333)
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEEEeCc
Confidence 99999999985 6777765432 2788999999999999999999999999999999999984 7789999999
Q ss_pred CccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1024 SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1024 LA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
++..........+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+..+.+..+......+.
T Consensus 147 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~-------- 218 (333)
T cd05600 147 LSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ-------- 218 (333)
T ss_pred CCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc--------
Confidence 998766656677899999999999999999999999999999999999999998888777666642111000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.|... ......+.++.+||.+||..+|.+||++.+|++||||...
T Consensus 219 -------------------------~~~~~---~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 219 -------------------------RPVYD---DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred -------------------------CCCCC---ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 00000 0012457899999999999999999999999999999874
No 40
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.8e-41 Score=366.40 Aligned_cols=243 Identities=24% Similarity=0.371 Sum_probs=202.9
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|+++.+++.||||++++.. ........|+.+++.+.| |||++++++|....++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------p~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH------PFLTALKYSFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC------CCCCCEEEEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 233456678888887754 48999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~--~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 75 EYANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEeeCCCCcccc
Confidence 99986 5666655432 2889999999999999999999999999999999999984 6789999999987532
Q ss_pred ---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1030 ---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1030 ---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-------------- 212 (323)
T cd05571 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------------- 212 (323)
T ss_pred cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--------------
Confidence 223456799999999999999999999999999999999999999988777666555531000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSH 1175 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~ 1175 (1182)
.+ ....+..+.+||++||+.||++|| ++.+||+||||+.
T Consensus 213 ---------------------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 213 ---------------------RF---------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred ---------------------CC---------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 00 123478899999999999999999 8999999999976
No 41
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.1e-40 Score=368.15 Aligned_cols=253 Identities=23% Similarity=0.364 Sum_probs=208.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||.|+||+||+|++..+++.||||++.+.. .....+..|+.+++.+. |+||++++++|....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~ 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD------NPWVVKLYYSFQDEN 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceEEEEEcCC
Confidence 46999999999999999999999999999999997642 23345667888888876 459999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.| +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~--~~~~kl~Dfg 146 (364)
T cd05599 75 YLYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA--KGHIKLSDFG 146 (364)
T ss_pred eEEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEeecc
Confidence 99999999985 5666665432 2899999999999999999999999999999999999984 7789999999
Q ss_pred CccccCCC-----------------------------------------cccccCCCcccchhhhcCCCCCchhhHHHHH
Q 001034 1024 SSCFETDH-----------------------------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLG 1062 (1182)
Q Consensus 1024 LA~~~~~~-----------------------------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLG 1062 (1182)
++...... ....+||+.|+|||++....++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 98643211 1134689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCC
Q 001034 1063 CILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMG 1142 (1182)
Q Consensus 1063 VILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~ 1142 (1182)
|++|+|++|++||.+.+....+..++..... ...|. ....
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~~~-------~~~~ 266 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKET---------------------------------LQFPD-------EVPL 266 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCCc---------------------------------cCCCC-------CCCC
Confidence 9999999999999988877776666421100 00111 1134
Q ss_pred cHHHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q 001034 1143 DQGFIDFVAHLLEINPKKRPS---ASDALKHPWLSHP 1176 (1182)
Q Consensus 1143 SeeL~DLIrkMLq~DPekRPT---AeELLqHPWFk~~ 1176 (1182)
+..+++||++||. +|.+|++ +.++|+||||+..
T Consensus 267 s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 267 SPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 7889999999997 9999998 9999999999764
No 42
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.3e-40 Score=361.27 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=208.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+|++++.||+|+||.||+|++..+++.||||++++.. ........|..++..+.++ ++|++++++|.....
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~i~~~~~~~~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP-----PFLTQLHSCFQTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCC-----CceeeeEEEEEcCCE
Confidence 4899999999999999999999999999999998642 2345567788888777654 379999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~ 147 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA--EGHIKIADFGM 147 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC--CCCEEEeecCc
Confidence 9999999985 5666654332 2788999999999999999999999999999999999984 67899999999
Q ss_pred cccc---CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1025 SCFE---TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1025 A~~~---~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+... .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......+
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~------- 220 (324)
T cd05587 148 CKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY------- 220 (324)
T ss_pred ceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-------
Confidence 8642 222345678999999999999999999999999999999999999999888777776664211110
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-----SDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-----eELLqHPWFk~~ 1176 (1182)
....+..+.+||++||..||.+|+++ .++++||||...
T Consensus 221 -------------------------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 221 -------------------------------------PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred -------------------------------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 11346789999999999999999986 899999999764
No 43
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.1e-40 Score=352.67 Aligned_cols=284 Identities=25% Similarity=0.405 Sum_probs=224.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|.++... ........|+.+++.+.| +||++++++|.....+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~nI~~~~~~~~~~~~~ 79 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH------ANIVTLHDIIHTEKSL 79 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC------CCcceEEEEEecCCeE
Confidence 67999999999999999999999999999999987542 223456678899888865 4899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.++|..++..... .+++..++.++.||+.||.|||+.||+|+||||+|||++. ++.++|+|||++.
T Consensus 80 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~~ 152 (301)
T cd07873 80 TLVFEYLDKDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINE--RGELKLADFGLAR 152 (301)
T ss_pred EEEEeccccCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECC--CCcEEECcCcchh
Confidence 99999999998888765422 2788899999999999999999999999999999999984 6789999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|++||...+....+..+...++.++...+...
T Consensus 153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence 53322 2234568899999998764 5889999999999999999999999999988888888888876665444321
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
.....+ ....+.......+....+..+..+.+||.+||++||.+|||+.++|+||||+..-|-
T Consensus 233 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~~ 295 (301)
T cd07873 233 LSNEEF--------------KSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGER 295 (301)
T ss_pred hccccc--------------cccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccch
Confidence 110000 000000000111112234567899999999999999999999999999999876543
No 44
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.3e-40 Score=370.27 Aligned_cols=281 Identities=27% Similarity=0.449 Sum_probs=222.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC--
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE-- 944 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e-- 944 (1182)
.|++.+.||.|+||.||++.+..+++.||||++.... .....+.+|+.+++.++|+ ||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHD------NVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCC------CcCCHhheecCCCcc
Confidence 3788999999999999999999999999999986532 2345677888888887654 8999999998876
Q ss_pred ---eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 945 ---HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 945 ---~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
++|+||||+.++|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~--~~~~kL~D 146 (372)
T cd07853 75 PFEEIYVVTELMQSDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNS--NCVLKICD 146 (372)
T ss_pred ccceEEEEeeccccCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECC--CCCEEecc
Confidence 899999999998888775432 2889999999999999999999999999999999999994 67899999
Q ss_pred CCCccccCCC----cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1022 LGSSCFETDH----LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1022 FGLA~~~~~~----~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
||++...... .....+++.|+|||++.+. .++.++||||||||+|+|++|++||.+.++...+..|...+|.++.
T Consensus 147 fg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~ 226 (372)
T cd07853 147 FGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL 226 (372)
T ss_pred ccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence 9998754322 2334678999999999875 4899999999999999999999999999999999999988887665
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
..+......... .... .....+....+.......+.++++||.+||++||.+|||+.++|+||||+..
T Consensus 227 ~~~~~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 227 EAMRSACEGARA------HILR------GPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred HHHHHhhHHHHH------HHHh------CCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence 433321110000 0000 0000111111112234457899999999999999999999999999999874
No 45
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=368.16 Aligned_cols=254 Identities=24% Similarity=0.386 Sum_probs=213.6
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCC-cEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTG-MDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TG-r~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
.+..++|++.+.||+|+||.||+|.+..++ ..||+|++.+.. .....+..|+.+++.+.| |||++++++
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~Iv~~~~~ 99 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH------PFCVNLYGS 99 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC------CCCcceEEE
Confidence 344578999999999999999999876654 789999997542 234556778888888754 599999999
Q ss_pred EEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 940 FYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
|.....+|+||||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+|
T Consensus 100 ~~~~~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~ik 171 (340)
T PTZ00426 100 FKDESYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDK--DGFIK 171 (340)
T ss_pred EEeCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEE
Confidence 9999999999999975 6777776443 2889999999999999999999999999999999999984 77899
Q ss_pred EecCCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1019 VIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1019 LiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
|+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.++..++..+......
T Consensus 172 L~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~----- 246 (340)
T PTZ00426 172 MTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIY----- 246 (340)
T ss_pred EecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCC-----
Confidence 999999987666566778999999999999999999999999999999999999999988877766666311100
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWL 1173 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWF 1173 (1182)
. ....+..+.+||++||+.||.+|+ ++.++++||||
T Consensus 247 ------------------------------~---------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 247 ------------------------------F---------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred ------------------------------C---------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 0 112367899999999999999995 89999999999
Q ss_pred CCC
Q 001034 1174 SHP 1176 (1182)
Q Consensus 1174 k~~ 1176 (1182)
...
T Consensus 288 ~~~ 290 (340)
T PTZ00426 288 GNI 290 (340)
T ss_pred CCC
Confidence 863
No 46
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-40 Score=363.62 Aligned_cols=253 Identities=26% Similarity=0.410 Sum_probs=211.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||.|+||.||+|++..+++.||||++++.. .....+..|+.++..+. |+||++++++|....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD------SPWIVKLYYSFQDEE 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC------CCCccchhhheecCC
Confidence 47999999999999999999999999999999998642 33455677888888876 459999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|+||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~--~~~~kL~Dfg 146 (350)
T cd05573 75 HLYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA--DGHIKLADFG 146 (350)
T ss_pred eEEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEeecCC
Confidence 99999999975 6777766442 2889999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCC--------------------------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 001034 1024 SSCFETDH--------------------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTG 1071 (1182)
Q Consensus 1024 LA~~~~~~--------------------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTG 1071 (1182)
++...... ....+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 98754332 2345789999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHH
Q 001034 1072 NVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVA 1151 (1182)
Q Consensus 1072 r~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIr 1151 (1182)
+.||...+....+.+++.....+ ..|. ...++..+.+||.
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~~---------------------------------~~p~-------~~~~~~~~~~li~ 266 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKESL---------------------------------RFPP-------DPPVSPEAIDLIC 266 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCcc---------------------------------cCCC-------CCCCCHHHHHHHH
Confidence 99999888777776664211110 0111 1125789999999
Q ss_pred HhcccCCCCCCC-HHHHHcCCCCCCC
Q 001034 1152 HLLEINPKKRPS-ASDALKHPWLSHP 1176 (1182)
Q Consensus 1152 kMLq~DPekRPT-AeELLqHPWFk~~ 1176 (1182)
+||. ||.+||+ +.+||+||||+..
T Consensus 267 ~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 267 RLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred HHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 9998 9999999 9999999999864
No 47
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.7e-40 Score=369.03 Aligned_cols=252 Identities=24% Similarity=0.341 Sum_probs=206.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+|++++.||+|+||+||+|+++.+++.||||++.+.. .....+.+|+.+++.+.| +||+++++.|....+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h------~~iv~~~~~~~~~~~ 75 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN------EWVVRLYYSFQDKDN 75 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC------CcCCeEEEEEEeCCE
Confidence 6999999999999999999999999999999997643 234566778888888754 489999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+||||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~--~g~~kL~DFGl 147 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFGL 147 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEEeECCC
Confidence 9999999985 5666665432 2788999999999999999999999999999999999984 77899999998
Q ss_pred ccccCC--------------------------------------------------CcccccCCCcccchhhhcCCCCCc
Q 001034 1025 SCFETD--------------------------------------------------HLCSYVQSRSYRAPEVILGLSYDK 1054 (1182)
Q Consensus 1025 A~~~~~--------------------------------------------------~~ss~vGTp~YmAPEVLlg~~yS~ 1054 (1182)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 742110 012347899999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccc
Q 001034 1055 KIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTS 1134 (1182)
Q Consensus 1055 kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~s 1134 (1182)
++||||||||||+|++|++||.+.++...+.++...... ...|
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p---- 270 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTS---------------------------------LHIP---- 270 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCC---------------------------------cCCC----
Confidence 999999999999999999999988877666555321100 0011
Q ss_pred cccCCCCCcHHHHHHHHHhcccCCCCCCC---HHHHHcCCCCCCC
Q 001034 1135 LRHRLPMGDQGFIDFVAHLLEINPKKRPS---ASDALKHPWLSHP 1176 (1182)
Q Consensus 1135 L~~~l~~~SeeL~DLIrkMLq~DPekRPT---AeELLqHPWFk~~ 1176 (1182)
.....+.++++||.+|+ .+|.+|++ +.++++||||+..
T Consensus 271 ---~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 271 ---PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred ---CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 11235788999999986 59999997 9999999999763
No 48
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.1e-40 Score=359.34 Aligned_cols=250 Identities=24% Similarity=0.375 Sum_probs=206.1
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
|++++.||+|+||.||+|.+..+++.||||++++.. .....+..|++++..+.. ..||||++++++|....++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~---l~hp~i~~~~~~~~~~~~~ 77 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANS---ERHPFLVNLFACFQTEDHV 77 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccc---cCCCChhceeeEEEcCCEE
Confidence 788999999999999999999999999999998542 233455666666665543 3588999999999999999
Q ss_pred EEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.++ |...+.. . .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 78 ~lv~E~~~~~~L~~~~~~-~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~--~~~~kL~Dfg~~ 148 (324)
T cd05589 78 CFVMEYAAGGDLMMHIHT-D------VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDT--EGFVKIADFGLC 148 (324)
T ss_pred EEEEcCCCCCcHHHHhhc-C------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC--CCcEEeCcccCC
Confidence 9999999975 4444321 1 2899999999999999999999999999999999999995 678999999998
Q ss_pred cccC---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFET---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
.... ......+|++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+..+......
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~--------- 219 (324)
T cd05589 149 KEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVR--------- 219 (324)
T ss_pred ccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---------
Confidence 6422 2234567899999999999999999999999999999999999999988877766655311000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
.....+..+.+||.+||+.||.+|| ++.++++||||+..
T Consensus 220 -----------------------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 220 -----------------------------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred -----------------------------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 0123468899999999999999999 79999999999763
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4.4e-40 Score=351.81 Aligned_cols=254 Identities=22% Similarity=0.281 Sum_probs=204.0
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
|++.+.||+|+||.||+|.++.+++.||+|++.+.. .....+.+|+.+++.+.|+ +|++++++|....++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~------~iv~~~~~~~~~~~~ 75 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSR------FVVSLAYAYETKDAL 75 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCC------cEEEEEEEEccCCeE
Confidence 788999999999999999999999999999987543 2223466788888888654 899999999999999
Q ss_pred EEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.++ |...+..... ..+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~--~~~~kl~Dfg~~ 149 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDD--RGHIRISDLGLA 149 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeCCCc
Confidence 9999999864 5444432221 23888999999999999999999999999999999999984 678999999998
Q ss_pred cccCC--CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1026 CFETD--HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1026 ~~~~~--~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...........+......
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~---------- 219 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE---------- 219 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc----------
Confidence 76432 234557899999999999999999999999999999999999999875543222222100000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
.........+..+.+||++||+.||.+||+ +.++++||||...
T Consensus 220 ------------------------------~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05631 220 ------------------------------DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNI 267 (285)
T ss_pred ------------------------------ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence 000112245789999999999999999997 9999999999764
No 50
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-41 Score=389.82 Aligned_cols=252 Identities=28% Similarity=0.473 Sum_probs=220.8
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..+-|++.+.||.|+-|.|.+|++..||+.+|||++.+.. .....+.+|+-||+.+.|+ |+++||+++..
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~Hp------nVl~LydVwe~ 83 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHP------NVLRLYDVWEN 83 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCC------Ceeeeeeeecc
Confidence 3467999999999999999999999999999999998752 3345677899999998766 89999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..++|+|.||+.| .|++++..... +++.++..+++||+.|+.|||..+||||||||+|+||+. ++.|||+|
T Consensus 84 ~~~lylvlEyv~gGELFdylv~kG~------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~--~~nIKIAD 155 (786)
T KOG0588|consen 84 KQHLYLVLEYVPGGELFDYLVRKGP------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDV--KNNIKIAD 155 (786)
T ss_pred CceEEEEEEecCCchhHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhc--ccCEeeec
Confidence 9999999999995 68888876543 899999999999999999999999999999999999995 55599999
Q ss_pred CCCccccC--CCcccccCCCcccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1022 LGSSCFET--DHLCSYVQSRSYRAPEVILGLSYD-KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1022 FGLA~~~~--~~~ss~vGTp~YmAPEVLlg~~yS-~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
||.|.... .-..+.||+|.|+|||++.|.+|. .++||||.|||||.||||++||.+++...++.++......
T Consensus 156 FGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~----- 230 (786)
T KOG0588|consen 156 FGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE----- 230 (786)
T ss_pred cceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc-----
Confidence 99997643 345688999999999999999986 7999999999999999999999999988888877422111
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+| ..++.++.+||++||..||++|+|.+||++|||++.-
T Consensus 231 ------------------------------MP---------s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 231 ------------------------------MP---------SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred ------------------------------CC---------CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 22 3457899999999999999999999999999999765
No 51
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-40 Score=374.79 Aligned_cols=261 Identities=29% Similarity=0.461 Sum_probs=227.4
Q ss_pred CceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 864 NSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 864 g~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
...+...|++.+.||+|.||.||+|+++.+|+.+|+|++.+... ......+|+.+|+++.. |||||.++++
T Consensus 30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~-----hpniv~l~~~ 104 (382)
T KOG0032|consen 30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG-----HPNIVQLKDA 104 (382)
T ss_pred cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC-----CCCEEEEEEE
Confidence 34566789999999999999999999999999999999987643 34678899999999973 5599999999
Q ss_pred EEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC--ce
Q 001034 940 FYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR--CE 1016 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d--G~ 1016 (1182)
|.+...+++|||++.| .|++.+... .+++..+..++.||+.|+.|||+.||+||||||+|||+..... +.
T Consensus 105 ~e~~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 105 FEDPDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred EEcCCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCc
Confidence 9999999999999995 677777654 2899999999999999999999999999999999999986543 57
Q ss_pred EEEecCCCccccCC--CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1017 VKVIDLGSSCFETD--HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1017 IKLiDFGLA~~~~~--~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
+|++|||++..... .....+||+.|+|||++...+|+..+||||+|||+|.||+|.+||.+.+....+.+|...-..+
T Consensus 178 ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDF 257 (382)
T ss_pred EEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCC
Confidence 99999999987665 4667899999999999999999999999999999999999999999999888887774221111
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
.....+.++..+++||++||..||.+|+|+.++|+|||++
T Consensus 258 ----------------------------------------~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 258 ----------------------------------------TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred ----------------------------------------CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 1123455689999999999999999999999999999998
Q ss_pred CC
Q 001034 1175 HP 1176 (1182)
Q Consensus 1175 ~~ 1176 (1182)
..
T Consensus 298 ~~ 299 (382)
T KOG0032|consen 298 SI 299 (382)
T ss_pred CC
Confidence 75
No 52
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.3e-40 Score=367.68 Aligned_cols=253 Identities=24% Similarity=0.365 Sum_probs=205.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||.|+||.||+|.++.+++.||||++.+.. .....+.+|+.+++.+. ||||++++++|....
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~iv~~~~~~~~~~ 74 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD------SPWVVSLYYSFQDAQ 74 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC------CCCcceEEEEEEcCC
Confidence 46999999999999999999999999999999997643 23345667888887765 459999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.| +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~--~~~~kl~DfG 146 (377)
T cd05629 75 YLYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR--GGHIKLSDFG 146 (377)
T ss_pred eeEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEEeecc
Confidence 99999999975 6777665432 2888999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCC--------------------------------------------------cccccCCCcccchhhhcCCCCC
Q 001034 1024 SSCFETDH--------------------------------------------------LCSYVQSRSYRAPEVILGLSYD 1053 (1182)
Q Consensus 1024 LA~~~~~~--------------------------------------------------~ss~vGTp~YmAPEVLlg~~yS 1053 (1182)
+++..... ....+||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 98521100 0124789999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccccc
Q 001034 1054 KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKT 1133 (1182)
Q Consensus 1054 ~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~ 1133 (1182)
.++|||||||++|+|++|++||.+.+....+..+......+ ..|.
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------------------~~p~-- 271 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL---------------------------------YFPD-- 271 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc---------------------------------CCCC--
Confidence 99999999999999999999999888777776664211100 0011
Q ss_pred ccccCCCCCcHHHHHHHHHhcccCCCCC---CCHHHHHcCCCCCCC
Q 001034 1134 SLRHRLPMGDQGFIDFVAHLLEINPKKR---PSASDALKHPWLSHP 1176 (1182)
Q Consensus 1134 sL~~~l~~~SeeL~DLIrkMLq~DPekR---PTAeELLqHPWFk~~ 1176 (1182)
....+.++.+||.+||. +|.+| +++.++|+||||+..
T Consensus 272 -----~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 272 -----DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred -----CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 11346889999999998 77765 599999999999853
No 53
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=6.1e-40 Score=353.85 Aligned_cols=286 Identities=26% Similarity=0.392 Sum_probs=208.5
Q ss_pred EEeccCCceEEEEEEEC--CCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe--cCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDL--HTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY--REHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk--~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd--~e~LyLVm 950 (1182)
.+||+|+||.||+|+++ .+++.||+|++..... .....+|+.+++.+.| |||++++++|.. ..++|+||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-SMSACREIALLRELKH------PNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-cHHHHHHHHHHHhcCC------CCCcceeeeEecCCCcEEEEEE
Confidence 57999999999999965 4778999999976532 3456789999998865 489999999865 46789999
Q ss_pred EecccChHHHHhhhccc---CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc--CCCceEEEecCCCc
Q 001034 951 ELLKANLYEFHKFNRES---GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS--YSRCEVKVIDLGSS 1025 (1182)
Q Consensus 951 EyL~GsLld~Lk~~~~s---ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs--~~dG~IKLiDFGLA 1025 (1182)
||+.++|..++...... .....+++..++.++.||+.||.|||++||+||||||+|||+.. ...+.+||+|||++
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99999998887644321 11234889999999999999999999999999999999999953 13568999999999
Q ss_pred cccCCC------cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHh
Q 001034 1026 CFETDH------LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSP---------ATLLARVIG 1089 (1182)
Q Consensus 1026 ~~~~~~------~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~---------~elLakIv~ 1089 (1182)
...... ....++|+.|+|||++.+. .++.++|||||||++|+|++|++||..... ...+.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 239 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHH
Confidence 764322 2345789999999999874 589999999999999999999999975332 355677777
Q ss_pred hcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1090 IIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1090 ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+|.++...+............ ...+...... ..+....+.......+..+++||++||++||.+|||++|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 240 VMGFPADKDWEDIKKMPEHSTL-MKDFRRNTYT-----NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred hcCCCChHHhHHHhhccchhhh-hhhhhccccC-----cccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 7776554443322111100000 0000000000 000000111112234678999999999999999999999999
Q ss_pred CCCC
Q 001034 1170 HPWL 1173 (1182)
Q Consensus 1170 HPWF 1173 (1182)
||||
T Consensus 314 hp~f 317 (317)
T cd07868 314 DPYF 317 (317)
T ss_pred CCCC
Confidence 9998
No 54
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-40 Score=370.47 Aligned_cols=257 Identities=30% Similarity=0.474 Sum_probs=217.2
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
..++|.+.+.||+|+||+||+|+++.++..||||.+.+. +...+....|+++|+.++|+ |||.|++.+..+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~------nIV~l~d~~~~~ 81 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHP------NIVRLLDCIEDD 81 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCc------ceeeEEEEEecC
Confidence 357899999999999999999999999999999999765 34456678999999999755 999999999999
Q ss_pred CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC-CC---ceEE
Q 001034 944 EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY-SR---CEVK 1018 (1182)
Q Consensus 944 e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~-~d---G~IK 1018 (1182)
+++|||||||. |+|..+++.... +++..++.++.||+.||++||+++||||||||.||||+.. .. -.+|
T Consensus 82 ~~i~lVMEyC~gGDLs~yi~~~~~------l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 82 DFIYLVMEYCNGGDLSDYIRRRGR------LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred CeEEEEEEeCCCCCHHHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEE
Confidence 99999999999 567777776542 8999999999999999999999999999999999999864 22 4699
Q ss_pred EecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1019 VIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1019 LiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
|+|||+|+..... ..+.||+|.|||||++..+.|+.++|+||+|+|+|+|++|++||...++.+++..+-..-.
T Consensus 156 IADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~---- 231 (429)
T KOG0595|consen 156 IADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE---- 231 (429)
T ss_pred ecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc----
Confidence 9999999986643 4678999999999999999999999999999999999999999999999888775521000
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+|.. ....+..+.+|+...|+.+|..|.+..+-+.|+++...
T Consensus 232 -------------------------------~~~~~------~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 232 -------------------------------IVPVL------PAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN 274 (429)
T ss_pred -------------------------------ccCch------hhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence 01110 11224556789999999999999999999999988654
No 55
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.6e-40 Score=365.89 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=204.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.|++++.||+|+||+||+|+++.+++.||||++.+.. .....+..|+.+++.+.| +||++++++|....+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h------~~iv~l~~~~~~~~~ 75 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN------EWVVKLYYSFQDKDN 75 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC------CCeeeeEEEEecCCE
Confidence 5899999999999999999999999999999997643 334566788888888754 499999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.| +|.+++.... .+++..++.++.||+.||.|||+.||+||||||+||||+. .+.+||+|||+
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~--~~~~kL~DFGl 147 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL--DGHIKLTDFGL 147 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECC--CCCEEEeeCcC
Confidence 9999999985 6766665432 2788899999999999999999999999999999999984 67899999998
Q ss_pred ccccCC--------------------------------------------------CcccccCCCcccchhhhcCCCCCc
Q 001034 1025 SCFETD--------------------------------------------------HLCSYVQSRSYRAPEVILGLSYDK 1054 (1182)
Q Consensus 1025 A~~~~~--------------------------------------------------~~ss~vGTp~YmAPEVLlg~~yS~ 1054 (1182)
+..... .....+||+.|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 743210 012357999999999999999999
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccc
Q 001034 1055 KIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTS 1134 (1182)
Q Consensus 1055 kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~s 1134 (1182)
++||||||||+|+|++|.+||...+......+++.....+ .+|
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~---------------------------------~~~---- 270 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTL---------------------------------HIP---- 270 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccccc---------------------------------CCC----
Confidence 9999999999999999999998877766555553111000 001
Q ss_pred cccCCCCCcHHHHHHHHHhccc--CCCCCCCHHHHHcCCCCCC
Q 001034 1135 LRHRLPMGDQGFIDFVAHLLEI--NPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1135 L~~~l~~~SeeL~DLIrkMLq~--DPekRPTAeELLqHPWFk~ 1175 (1182)
.....+.++++||.+||.. +|..|+++.+|++||||+.
T Consensus 271 ---~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 271 ---PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred ---CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 1123578999999996654 4455999999999999986
No 56
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.9e-40 Score=356.34 Aligned_cols=242 Identities=26% Similarity=0.403 Sum_probs=202.0
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||+|+||.||+|++..+++.||+|++++. ......+..|+.+++.+.| |||++++++|.....+|+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e~ 74 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC------PFIVPLKFSFQSPEKLYLVLAF 74 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CcEeceeeEEecCCeEEEEEcC
Confidence 69999999999999999999999999753 2334556778888888754 5899999999999999999999
Q ss_pred ccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC-
Q 001034 953 LKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD- 1030 (1182)
Q Consensus 953 L~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~- 1030 (1182)
+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 75 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~--~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 75 INGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDY--QGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECC--CCcEEEEECcccccCccC
Confidence 985 5667665432 2888999999999999999999999999999999999984 67899999999875322
Q ss_pred --CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchh
Q 001034 1031 --HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKY 1108 (1182)
Q Consensus 1031 --~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~ 1108 (1182)
.....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....+..++....
T Consensus 147 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~---------------- 210 (312)
T cd05585 147 DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL---------------- 210 (312)
T ss_pred CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC----------------
Confidence 23346799999999999999999999999999999999999999998877666655531100
Q ss_pred hcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC---CHHHHHcCCCCCCC
Q 001034 1109 FTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP---SASDALKHPWLSHP 1176 (1182)
Q Consensus 1109 F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP---TAeELLqHPWFk~~ 1176 (1182)
......+..+.+||.+||.+||.+|| ++.++|.||||...
T Consensus 211 ----------------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 211 ----------------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred ----------------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 00123468899999999999999997 58999999999864
No 57
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.5e-39 Score=358.91 Aligned_cols=300 Identities=31% Similarity=0.541 Sum_probs=230.5
Q ss_pred ceeeeCc---eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcc
Q 001034 859 FHVVLNS---VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYH 932 (1182)
Q Consensus 859 f~V~ig~---iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPn 932 (1182)
+++..+. .+.++|++++.||.|+||.||+|.+..+++.||||++.+. .........|+.+++.+.| +|
T Consensus 3 ~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~ 76 (353)
T cd07850 3 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNH------KN 76 (353)
T ss_pred eeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCC------CC
Confidence 4555555 4578999999999999999999999999999999998653 2233456678888888765 48
Q ss_pred eEEEEEEEEec------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCcc
Q 001034 933 LLRLYDYFYYR------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPEN 1006 (1182)
Q Consensus 933 IVkL~dsFqd~------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeN 1006 (1182)
|++++++|... .++|+||||+.++|...+... ++...+..++.||+.||.|||++||+||||||+|
T Consensus 77 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~N 148 (353)
T cd07850 77 IIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 148 (353)
T ss_pred CcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence 99999998654 357999999999988876532 6788899999999999999999999999999999
Q ss_pred EEEccCCCceEEEecCCCccccCCCc--ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001034 1007 ILVKSYSRCEVKVIDLGSSCFETDHL--CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLL 1084 (1182)
Q Consensus 1007 ILIDs~~dG~IKLiDFGLA~~~~~~~--ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elL 1084 (1182)
||++. ++.+||+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++|+.||...+....+
T Consensus 149 il~~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~ 226 (353)
T cd07850 149 IVVKS--DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQW 226 (353)
T ss_pred EEECC--CCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 99985 6789999999997654432 3346788999999999999999999999999999999999999999988899
Q ss_pred HHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccc---cccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1085 ARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTS---LRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1085 akIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~s---L~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
..++..++.++..+..........+....... ....+....+.... ........+..+++||.+||++||.+|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 302 (353)
T cd07850 227 NKIIEQLGTPSDEFMSRLQPTVRNYVENRPKY----AGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKR 302 (353)
T ss_pred HHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCC----CCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhC
Confidence 99998888877766554332222111111000 00001111111100 000122346789999999999999999
Q ss_pred CCHHHHHcCCCCCCCCC
Q 001034 1162 PSASDALKHPWLSHPYE 1178 (1182)
Q Consensus 1162 PTAeELLqHPWFk~~~e 1178 (1182)
||+.|||.||||..-+.
T Consensus 303 ~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 303 ISVDDALQHPYINVWYD 319 (353)
T ss_pred cCHHHHhcChhHhhccC
Confidence 99999999999975443
No 58
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.8e-39 Score=354.30 Aligned_cols=296 Identities=24% Similarity=0.312 Sum_probs=214.3
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
..++|++++.||+|+||.||++++..++..||+|++... ......+.+|+.+++.++|+ ||++++++|....
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~ 76 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP------YIVGFYGAFYSDG 76 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCC------CCCeEEEEEEECC
Confidence 357899999999999999999999999999999999764 23446788899999988654 8999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc-CccccccCCccEEEccCCCceEEEecC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL-GLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~-GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.+++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~--~~~~kl~Df 148 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNS--RGEIKLCDF 148 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcC--CCcEEEccC
Confidence 99999999986 6766665432 278889999999999999999986 6999999999999984 678999999
Q ss_pred CCccccCC-CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1023 GSSCFETD-HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1023 GLA~~~~~-~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
|++..... ......+++.|+|||++.+..++.++|||||||++|+|++|+.||...+..++...+-.............
T Consensus 149 g~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
T cd06649 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS 228 (331)
T ss_pred cccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccc
Confidence 99875433 23456789999999999999999999999999999999999999988776554332211000000000000
Q ss_pred ccccc----hhhcccchh-hhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1102 GRDTY----KYFTKNHML-YERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~----k~F~k~~~~-~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
..... ..+...... ................ .........++.++++||.+||++||++|||+.+||+||||+..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 229 ISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE-PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred cCcccccccccccccccccccchhHHHHHHHHHhC-CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 00000 000000000 0000000000000000 00011122467899999999999999999999999999999865
Q ss_pred C
Q 001034 1177 Y 1177 (1182)
Q Consensus 1177 ~ 1177 (1182)
.
T Consensus 308 ~ 308 (331)
T cd06649 308 E 308 (331)
T ss_pred c
Confidence 3
No 59
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-39 Score=340.43 Aligned_cols=278 Identities=29% Similarity=0.440 Sum_probs=218.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++++.||.|+||.||+|.+..++..||||+++... .......+|+.+++.+.| |||++++++|.....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~ 74 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH------PNIVCLQDVLMQESRL 74 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC------CCEeeeEEEEeeCCeE
Confidence 4899999999999999999999999999999986532 223556788899888864 5899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.++|..++..... ...+++..++.++.||+.||.|||+.+|+|+||||+|||++. ++.++|+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~ 149 (285)
T cd07861 75 YLIFEFLSMDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDN--KGVIKLADFGLAR 149 (285)
T ss_pred EEEEecCCCCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcC--CCcEEECccccee
Confidence 99999999988888765432 123889999999999999999999999999999999999984 7789999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|++||.+......+..+...++.+....+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 150 AFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred ecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 54322 2234568899999998754 5789999999999999999999999988877777777766666554443322
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.....+ .. . ........+......++.++++||++||+.||.+|||+.+||.||||
T Consensus 230 ~~~~~~-~~------------~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 230 TSLPDY-KN------------T--FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhhHHH-Hh------------h--ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 111100 00 0 00000011112234468999999999999999999999999999998
No 60
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-39 Score=355.66 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=206.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+|++++.||+|+||.||+|++..+++.||||++++.. ........|..++..+. .|++|++++++|.....
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-----KPPFLTQLHSCFQTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCeEeeEEEEEecCCE
Confidence 4889999999999999999999999999999998643 22234455666666554 34699999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.+ +|..++.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kL~DfG~ 147 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC--CCcEEEccCCC
Confidence 9999999985 6666654332 2888999999999999999999999999999999999994 67899999999
Q ss_pred ccccC---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1025 SCFET---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1025 A~~~~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+.... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+...++..+......
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~-------- 219 (323)
T cd05616 148 CKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-------- 219 (323)
T ss_pred ceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------
Confidence 86432 2234567899999999999999999999999999999999999999988887777666421110
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
. ....+.++.+||.+||+.||.+|++ ..++++||||...
T Consensus 220 ---------------------------~---------p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 220 ---------------------------Y---------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred ---------------------------C---------CCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 0 1134678999999999999999998 4899999999753
No 61
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.1e-39 Score=344.62 Aligned_cols=276 Identities=28% Similarity=0.436 Sum_probs=217.3
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++.+.||.|+||.||+|.+..+|+.||+|+++... .....+.+|+.+++.++|+ ||+++++++.+...+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~------~i~~~~~~~~~~~~~ 74 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK------NIVRLYDVLHSDKKL 74 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCC------CeeeHHHHhccCCce
Confidence 5899999999999999999999999999999997532 2234566789999888654 899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+|+||+.++|..++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.
T Consensus 75 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~--~~~~~l~dfg~~~ 147 (284)
T cd07839 75 TLVFEYCDQDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINK--NGELKLADFGLAR 147 (284)
T ss_pred EEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcC--CCcEEECccchhh
Confidence 99999999999888764322 2889999999999999999999999999999999999995 6789999999987
Q ss_pred ccCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVL-FQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~P-F~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
..... .....+++.|+|||++.+. .++.++|||||||++|+|++|..| |.+.+....+..+...++.++...+..
T Consensus 148 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 148 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred ccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHH
Confidence 54322 2234668899999998775 478999999999999999998877 566777778888877777655433221
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
......+ . .....+.........+..+..+++||.+||+.||.+|||+.+||+||||
T Consensus 228 ~~~~~~~-----~----------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 228 VSKLPDY-----K----------PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhhcccc-----c----------ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 1110000 0 0000111111223345678999999999999999999999999999998
No 62
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.9e-40 Score=364.43 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=206.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||+|+||.||+|++..+++.||||++.+.. .....+.+|+.+|+.+.| +||+++++.|....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h------~~iv~~~~~~~~~~ 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN------EWVVKLYYSFQDKD 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC------CCcceEEEEEEcCC
Confidence 36999999999999999999999999999999997542 233456778888888865 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.+ +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. .+.+||+|||
T Consensus 75 ~~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~--~~~ikL~DFG 146 (376)
T cd05598 75 NLYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 146 (376)
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC--CCCEEEEeCC
Confidence 99999999985 6777765432 2788899999999999999999999999999999999984 6789999999
Q ss_pred CccccCC----------------------------------------------CcccccCCCcccchhhhcCCCCCchhh
Q 001034 1024 SSCFETD----------------------------------------------HLCSYVQSRSYRAPEVILGLSYDKKID 1057 (1182)
Q Consensus 1024 LA~~~~~----------------------------------------------~~ss~vGTp~YmAPEVLlg~~yS~kSD 1057 (1182)
++..... .....+||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 9742110 011347999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccccccccc
Q 001034 1058 IWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRH 1137 (1182)
Q Consensus 1058 IWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~ 1137 (1182)
|||||||+|+|++|++||...++...+.++...... ..+|
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~~------- 266 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWETT---------------------------------LHIP------- 266 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCcc---------------------------------ccCC-------
Confidence 999999999999999999988876665554311000 0011
Q ss_pred CCCCCcHHHHHHHHHhcccCCCCCC---CHHHHHcCCCCCC
Q 001034 1138 RLPMGDQGFIDFVAHLLEINPKKRP---SASDALKHPWLSH 1175 (1182)
Q Consensus 1138 ~l~~~SeeL~DLIrkMLq~DPekRP---TAeELLqHPWFk~ 1175 (1182)
.....+..+.+||.+|+ .+|.+|+ |+.++++||||+.
T Consensus 267 ~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 267 SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 11235788999999977 5999999 9999999999986
No 63
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-40 Score=372.31 Aligned_cols=255 Identities=24% Similarity=0.345 Sum_probs=215.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.+.|++++.||+|.-|+||+|+...++..+|||++.+.. ....+...|..||+.+. ||+|+.||..|+..
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD------HPFlPTLYa~fet~ 149 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD------HPFLPTLYASFETD 149 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC------CCccchhhheeecc
Confidence 456888899999999999999999999999999998764 33456677888888875 55999999999999
Q ss_pred CeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
...|+|||||+|+ |..+.+.+.. ..|++..+++|+.+|+.||+|||-+|||+|||||+||||. .+|+|.|+||
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQp~----~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr--edGHIMLsDF 223 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQPG----KRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR--EDGHIMLSDF 223 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhCCC----CccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe--cCCcEEeeec
Confidence 9999999999975 5544444332 3499999999999999999999999999999999999999 5889999999
Q ss_pred CCcccc-----------------------------------C-C-----------------------CcccccCCCcccc
Q 001034 1023 GSSCFE-----------------------------------T-D-----------------------HLCSYVQSRSYRA 1043 (1182)
Q Consensus 1023 GLA~~~-----------------------------------~-~-----------------------~~ss~vGTp~YmA 1043 (1182)
.++... . . ...+++||-.|+|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 865210 0 0 0234688999999
Q ss_pred hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchh
Q 001034 1044 PEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETN 1123 (1182)
Q Consensus 1044 PEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets 1123 (1182)
||++.|...+.++|||+||++|||||.|..||.+.+..+++.+|+..-..+|
T Consensus 304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp---------------------------- 355 (459)
T KOG0610|consen 304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFP---------------------------- 355 (459)
T ss_pred ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCC----------------------------
Confidence 9999999999999999999999999999999999999999999862211111
Q ss_pred hhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC----HHHHHcCCCCCCC
Q 001034 1124 RLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1124 ~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT----AeELLqHPWFk~~ 1176 (1182)
..+.++..++|||+++|.+||.+|+. |.||-+||||+..
T Consensus 356 --------------~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gV 398 (459)
T KOG0610|consen 356 --------------EEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGV 398 (459)
T ss_pred --------------CCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCC
Confidence 11245789999999999999999999 9999999999876
No 64
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-39 Score=361.46 Aligned_cols=253 Identities=21% Similarity=0.357 Sum_probs=207.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
+.|++++.||+|+||.||+|.++.+++.||||+++... .....+..|+.++..+.| ++|+++++.|....
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~iv~~~~~~~~~~ 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG------AWVVKMFYSFQDKR 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC------CCEeeEEEEEEcCC
Confidence 46999999999999999999999999999999997532 234456678888877654 58999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||++| +|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~--~~~vkL~DfG 146 (360)
T cd05627 75 NLYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA--KGHVKLSDFG 146 (360)
T ss_pred EEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC--CCCEEEeecc
Confidence 99999999985 6777665432 2889999999999999999999999999999999999984 7789999999
Q ss_pred CccccCCC--------------------------------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHH
Q 001034 1024 SSCFETDH--------------------------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCIL 1065 (1182)
Q Consensus 1024 LA~~~~~~--------------------------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVIL 1065 (1182)
++...... ....+||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 98643211 1245799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHH
Q 001034 1066 AELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQG 1145 (1182)
Q Consensus 1066 YELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~See 1145 (1182)
|+|++|++||.+.++...+.+++..... ..+|. ....+..
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~~---------------------------------~~~p~-------~~~~s~~ 266 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKET---------------------------------LVFPP-------EVPISEK 266 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCCc---------------------------------eecCC-------CCCCCHH
Confidence 9999999999998887777666421100 00111 1124788
Q ss_pred HHHHHHHhcccCCCCCC---CHHHHHcCCCCCCC
Q 001034 1146 FIDFVAHLLEINPKKRP---SASDALKHPWLSHP 1176 (1182)
Q Consensus 1146 L~DLIrkMLq~DPekRP---TAeELLqHPWFk~~ 1176 (1182)
+++||.+|+. ||.+|+ ++.++++||||+..
T Consensus 267 ~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 267 AKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred HHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 9999999874 999998 58999999999864
No 65
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-39 Score=358.50 Aligned_cols=244 Identities=24% Similarity=0.369 Sum_probs=201.5
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|++..+++.||||++.+.. .....+..|+.+++.+.| |||++++++|....++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~iv~~~~~~~~~~~~~lv~ 74 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH------PFLTSLKYSFQTKDRLCFVM 74 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCCcceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999997642 234456678888877754 58999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 Ey~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~--~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 75 EYVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDK--DGHIKITDFGLCKEGI 146 (328)
T ss_pred eCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECC--CCcEEEecCcCCccCC
Confidence 99986 5555554322 2889999999999999999999999999999999999984 6789999999987532
Q ss_pred C---CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1030 D---HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1030 ~---~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~-------------- 212 (328)
T cd05593 147 TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI-------------- 212 (328)
T ss_pred CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCc--------------
Confidence 2 23346799999999999999999999999999999999999999988776665554421000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
.+ ....+..+.+||++||+.||.+|+ ++.+|++||||...
T Consensus 213 ---------------------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 213 ---------------------KF---------PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred ---------------------cC---------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 00 123468899999999999999997 89999999999764
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-39 Score=355.86 Aligned_cols=244 Identities=23% Similarity=0.362 Sum_probs=202.1
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||++++..+|+.||+|++++.. ........|+.+++.+.| |||++++++|....++||||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h------p~i~~~~~~~~~~~~~~lv~ 74 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH------PFLTALKYAFQTHDRLCFVM 74 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC------CCCcceeeEEecCCEEEEEE
Confidence 36899999999999999999999999997642 233455678888887755 48999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 75 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~--~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 75 EYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDK--DGHIKITDFGLCKEGI 146 (323)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcC--CCCEEecccHHhcccc
Confidence 99986 5555554322 2889999999999999999999999999999999999984 6789999999986432
Q ss_pred C---CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1030 D---HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1030 ~---~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
. .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....+..+.....
T Consensus 147 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~-------------- 212 (323)
T cd05595 147 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------------- 212 (323)
T ss_pred CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--------------
Confidence 2 22346789999999999999999999999999999999999999988877666655531000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
.+ ....+..+.+||.+||+.||.+|+ ++.++++||||...
T Consensus 213 ---------------------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 213 ---------------------RF---------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred ---------------------CC---------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 00 123468899999999999999998 99999999999763
No 67
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-39 Score=355.27 Aligned_cols=244 Identities=24% Similarity=0.406 Sum_probs=202.3
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|+++.+++.||||++++.. ........|..++..+. .||||++++++|....++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLYCCFQTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-----CCCchhceeeEEEcCCEEEEEE
Confidence 36899999999999999999999999997542 23445566777776653 3569999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~--~~~~kL~DfG~~~~~~ 147 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDH--EGHCKLADFGMCKEGI 147 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeeCCCCeecC
Confidence 99986 5665554432 2889999999999999999999999999999999999984 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+...++..+......
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~------------- 214 (320)
T cd05590 148 FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV------------- 214 (320)
T ss_pred cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCC-------------
Confidence 22234567899999999999999999999999999999999999999988877776666311000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH------HHHHcCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA------SDALKHPWLSH 1175 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA------eELLqHPWFk~ 1175 (1182)
.....+.++.+||++||+.||.+||++ .++++||||+.
T Consensus 215 -------------------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 215 -------------------------------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred -------------------------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 011246789999999999999999998 99999999975
No 68
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-39 Score=355.30 Aligned_cols=254 Identities=24% Similarity=0.338 Sum_probs=207.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|.+.+.||.|+||+||+|.++.+++.||||++++... ....+..|+.+++.+. |+||++++++|....
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~------~~~i~~~~~~~~~~~ 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN------SPWIPQLQYAFQDKD 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceeeEEecCC
Confidence 469999999999999999999999999999999986532 3344566777777654 459999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.+ +|.+++..... .+++..++.++.||+.||.|||+.+|+||||||+|||++. .+.+||+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~--~~~~kL~Dfg 147 (330)
T cd05601 75 NLYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR--TGHIKLADFG 147 (330)
T ss_pred eEEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC--CCCEEeccCC
Confidence 99999999975 67777665422 2889999999999999999999999999999999999984 7789999999
Q ss_pred CccccCCC----cccccCCCcccchhhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1024 SSCFETDH----LCSYVQSRSYRAPEVIL------GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1024 LA~~~~~~----~ss~vGTp~YmAPEVLl------g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
++...... .....+|+.|+|||++. ...++.++||||||||+|+|++|+.||...+....+.+++.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 227 (330)
T cd05601 148 SAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRF 227 (330)
T ss_pred CCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCc
Confidence 98754332 12347899999999997 456889999999999999999999999988877766666421000
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...| ..+..+..+.+||.+||+ +|.+|||+.++++||||
T Consensus 228 ---------------------------------~~~~-------~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~ 266 (330)
T cd05601 228 ---------------------------------LKFP-------EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF 266 (330)
T ss_pred ---------------------------------cCCC-------CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence 0001 123457889999999998 99999999999999999
Q ss_pred CCC
Q 001034 1174 SHP 1176 (1182)
Q Consensus 1174 k~~ 1176 (1182)
+..
T Consensus 267 ~~~ 269 (330)
T cd05601 267 SKI 269 (330)
T ss_pred CCC
Confidence 863
No 69
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6.1e-39 Score=331.86 Aligned_cols=252 Identities=34% Similarity=0.575 Sum_probs=206.0
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhH---HHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFD---QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~d---q~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
|++.+.||+|+||+||++++..+++.||+|++........ ....|+.+++.+.|+ ||+++++++.....+|
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~------~i~~~~~~~~~~~~~~ 74 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHP------NIVQILDVFQDDNYLY 74 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBT------TBCHEEEEEEESSEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccc------cccccccccccccccc
Confidence 8999999999999999999999999999999987753322 234588899988544 8999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+|||++.+ +|.+++..... +++..+..++.||+.||.+||+.+|+|+||||+|||++ .++.++|+|||++.
T Consensus 75 ~v~~~~~~~~L~~~l~~~~~------~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~--~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 75 IVMEYCPGGSLQDYLQKNKP------LSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD--ENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEETTEBHHHHHHHHSS------BBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES--TTSEEEESSGTTTE
T ss_pred cccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccc--cccccccccccccc
Confidence 99999998 78888773322 88999999999999999999999999999999999999 47889999999986
Q ss_pred c---cCCCcccccCCCcccchhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 F---ETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~---~~~~~ss~vGTp~YmAPEVLl-g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
. .........+++.|+|||++. +..++.++||||||+++|+|++|..||...........+...........
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 222 (260)
T PF00069_consen 147 KLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSS---- 222 (260)
T ss_dssp ESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHH----
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc----
Confidence 4 233445667899999999998 88899999999999999999999999988744444333322211110000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.. ........+.+||.+||+.||.+||++.++++||||
T Consensus 223 --------------------------~~-------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 223 --------------------------SQ-------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp --------------------------TT-------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred --------------------------cc-------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 00 000112789999999999999999999999999998
No 70
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-40 Score=382.53 Aligned_cols=251 Identities=26% Similarity=0.451 Sum_probs=222.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|.+.+.||+|+||.||+++.+.+.+.||||.+.+.. .......+|++|++.++|+ |||.++++|+...+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHp------niv~m~esfEt~~~ 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHP------NIVEMLESFETSAH 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCc------chhhHHHhhcccce
Confidence 57889999999999999999999999999999997653 3456688999999999766 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+++|.||+.|+|..++..... +++..++.|+++++.||.|||+.+|+|||+||.|||+. +.|.+||||||+|
T Consensus 76 ~~vVte~a~g~L~~il~~d~~------lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~--~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 76 LWVVTEYAVGDLFTILEQDGK------LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE--KGGTLKLCDFGLA 147 (808)
T ss_pred EEEEehhhhhhHHHHHHhccC------CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec--CCCceeechhhhh
Confidence 999999999999999886654 99999999999999999999999999999999999999 5788999999999
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
+..... ..+..|||.|||||++.+.+|+..+|+||||||+|||++|++||+..+..++...|..---+
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~--------- 218 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK--------- 218 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC---------
Confidence 865543 34668999999999999999999999999999999999999999998887777777411111
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.....+..|++||..+|.+||.+|+|=.++|.|||.+...
T Consensus 219 -----------------------------------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 219 -----------------------------------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred -----------------------------------CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 1125578999999999999999999999999999997654
No 71
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=8e-39 Score=344.63 Aligned_cols=286 Identities=25% Similarity=0.400 Sum_probs=225.3
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
.++|++.+.||.|+||.||+|.+..+++.||+|+++... .......+|+.+++.+.|+ ||+++++++...
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~i~~~~~~~~~~~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHP------NIVELKEVVVGKH 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCC------CCcceEEEEecCC
Confidence 467999999999999999999999999999999997542 1223456789999888655 899999999765
Q ss_pred -CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 -EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 -e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+|+||||+.++|..++.... ..+++..+..++.||+.||.|||+.|++||||||+|||++. .+.+||+||
T Consensus 80 ~~~~~lv~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~kL~df 152 (309)
T cd07845 80 LDSIFLVMEYCEQDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTD--KGCLKIADF 152 (309)
T ss_pred CCeEEEEEecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCCEEECcc
Confidence 5689999999998888877543 23889999999999999999999999999999999999984 678999999
Q ss_pred CCccccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1023 GSSCFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1023 GLA~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
|++...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.+...+
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T cd07845 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESI 232 (309)
T ss_pred ceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhh
Confidence 998765432 223345788999999876 4688999999999999999999999999999999999988887665544
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYE 1178 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~e 1178 (1182)
+........ .............+.......+..+.+||.+||++||++|||+.+||+||||+....
T Consensus 233 ~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~ 298 (309)
T cd07845 233 WPGFSDLPL--------------VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPL 298 (309)
T ss_pred chhhhcccc--------------cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCC
Confidence 322111000 000000000011122233445789999999999999999999999999999998776
Q ss_pred CC
Q 001034 1179 PI 1180 (1182)
Q Consensus 1179 P~ 1180 (1182)
|.
T Consensus 299 ~~ 300 (309)
T cd07845 299 PC 300 (309)
T ss_pred CC
Confidence 64
No 72
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=360.85 Aligned_cols=261 Identities=28% Similarity=0.426 Sum_probs=221.9
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
..+.+.|++.+.||+|+|+.|+++.+..+|+.+|+|++...+ ...+.+.+|++|-+.|+| ||||+|.+.+.
T Consensus 7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH------P~IvrL~~ti~ 80 (355)
T KOG0033|consen 7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH------PNIVRLHDSIQ 80 (355)
T ss_pred cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC------CcEeehhhhhc
Confidence 356788999999999999999999999999999999986542 345667778888777754 59999999999
Q ss_pred ecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC-ceEEEe
Q 001034 942 YREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR-CEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d-G~IKLi 1020 (1182)
.....|||+|+|.|+-+-+-...+ .++++..+..+++||+.||.|+|.+||||||+||.|+|+-+..+ .-+||+
T Consensus 81 ~~~~~ylvFe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~ 155 (355)
T KOG0033|consen 81 EESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLA 155 (355)
T ss_pred ccceeEEEEecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeec
Confidence 999999999999986444433333 24889999999999999999999999999999999999976443 369999
Q ss_pred cCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1021 DLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1021 DFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
|||++...... ....+|||.|||||++...+|+..+|||+.|||||-||.|++||.+.+...++.+|++.--..|.
T Consensus 156 ~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~-- 233 (355)
T KOG0033|consen 156 DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPS-- 233 (355)
T ss_pred ccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCC--
Confidence 99999765532 34678999999999999999999999999999999999999999999999999999743222211
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+..+.+++++++||++||..||.+|+|+.|+|+|||+.+.
T Consensus 234 --------------------------------------~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 234 --------------------------------------PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred --------------------------------------cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 2345678999999999999999999999999999999764
No 73
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.1e-39 Score=344.23 Aligned_cols=286 Identities=26% Similarity=0.407 Sum_probs=206.5
Q ss_pred EEeccCCceEEEEEEECC--CCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe--cCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLH--TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY--REHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~--TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd--~e~LyLVm 950 (1182)
.+||+|+||.||+|+.+. ++..||+|.+..... .....+|+.+++.+.|+ ||++++++|.. ...+|+||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-SMSACREIALLRELKHP------NVIALQKVFLSHSDRKVWLLF 79 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-cHHHHHHHHHHHhCCCC------CeeeEEEEEeccCCCeEEEEE
Confidence 579999999999999654 668899999876532 34567899999988654 89999999864 46789999
Q ss_pred EecccChHHHHhhhccc---CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC--CCceEEEecCCCc
Q 001034 951 ELLKANLYEFHKFNRES---GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY--SRCEVKVIDLGSS 1025 (1182)
Q Consensus 951 EyL~GsLld~Lk~~~~s---ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~--~dG~IKLiDFGLA 1025 (1182)
||+.++|..++...... .....+++..++.++.||+.||.|||+.+|+||||||+|||+... ..+.+||+|||++
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 99999998887643221 112348888999999999999999999999999999999999531 3578999999999
Q ss_pred cccCCC------cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH---------HHHHHHHHh
Q 001034 1026 CFETDH------LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSP---------ATLLARVIG 1089 (1182)
Q Consensus 1026 ~~~~~~------~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~---------~elLakIv~ 1089 (1182)
+..... .....+|+.|+|||++.+. .++.++|||||||++|+|++|.+||..... ...+.++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 239 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFS 239 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHH
Confidence 764332 2345678999999999774 589999999999999999999999975332 244566666
Q ss_pred hcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1090 IIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1090 ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.++.+....+........+................+ ...........+..+++||.+||+.||.+|||+.|||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 240 VMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSL------IKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred hcCCCChhhhhhhhhcccchhhhhhhcccccCCchh------hhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 666554443332221111100000000000000000 00111112234678999999999999999999999999
Q ss_pred CCCC
Q 001034 1170 HPWL 1173 (1182)
Q Consensus 1170 HPWF 1173 (1182)
||||
T Consensus 314 hp~f 317 (317)
T cd07867 314 DPYF 317 (317)
T ss_pred CCCC
Confidence 9998
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.9e-39 Score=351.62 Aligned_cols=250 Identities=25% Similarity=0.377 Sum_probs=200.0
Q ss_pred CEEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEeccc-----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDL---HTGMDVCVKIIKNNK-----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk---~TGr~VAVKIIkk~k-----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
+|++++.||+|+||.||+|++. .+++.||+|++.+.. ........|+.+++.+.+ |++|++++++|.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~~i~~~~~~~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQ-----SPFLVTLHYAFQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccC-----CCCcccEEEEEe
Confidence 4899999999999999999864 578999999997532 223456678888888753 459999999999
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
....+|+||||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~--~~~~kl~ 147 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS--EGHVVLT 147 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECC--CCCEEEe
Confidence 99999999999985 6666665432 2889999999999999999999999999999999999984 6789999
Q ss_pred cCCCccccCC----CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhhc
Q 001034 1021 DLGSSCFETD----HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPA----TLLARVIGII 1091 (1182)
Q Consensus 1021 DFGLA~~~~~----~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~----elLakIv~il 1091 (1182)
|||+++.... .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||...... .....+...
T Consensus 148 DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~- 226 (332)
T cd05614 148 DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC- 226 (332)
T ss_pred eCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC-
Confidence 9999875322 22346789999999999875 4889999999999999999999999643221 111111100
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHH
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASD 1166 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeE 1166 (1182)
.+ ......+..+.+||.+||+.||.+|| ++.+
T Consensus 227 -------------------------------------~~------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 227 -------------------------------------DP------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred -------------------------------------CC------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 00 01123578899999999999999999 8899
Q ss_pred HHcCCCCCCC
Q 001034 1167 ALKHPWLSHP 1176 (1182)
Q Consensus 1167 LLqHPWFk~~ 1176 (1182)
+++||||+..
T Consensus 264 ~l~h~~~~~~ 273 (332)
T cd05614 264 IKEHPFFKGL 273 (332)
T ss_pred HHcCCCcCCC
Confidence 9999999863
No 75
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1e-38 Score=336.20 Aligned_cols=278 Identities=28% Similarity=0.496 Sum_probs=221.3
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+.| +||++++++|.....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~ 74 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH------PYVVKLLDVFPHGSGF 74 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC------CCCcceeeEEecCCee
Confidence 5899999999999999999999999999999997643 234567788888888864 5899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.++|.+++..... .+++..++.++.||+.||.|||+.+++|+||||+||+++. .+.++|+|||++.
T Consensus 75 ~~v~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~--~~~~~l~dfg~~~ 147 (286)
T cd07832 75 VLVMEYMPSDLSEVLRDEER-----PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA--DGVLKIADFGLAR 147 (286)
T ss_pred EEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcC--CCcEEEeeeeecc
Confidence 99999997788888765432 3889999999999999999999999999999999999995 6789999999987
Q ss_pred ccCCC----cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETDH----LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~~----~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
..... .....++..|+|||++.+. .++.++|||||||++|+|++|.+||.+......+.+++..++.+....+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07832 148 LFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPG 227 (286)
T ss_pred cccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhh
Confidence 65432 2345788999999998754 468999999999999999999999999888888888888777654433222
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
......+ ..+.........+....+..+..+.+||.+||.++|.+|||+.++|+||||.
T Consensus 228 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 228 LTSLPDY--------------NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccCcchh--------------hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 1111000 0000000011112223345678999999999999999999999999999995
No 76
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-39 Score=352.19 Aligned_cols=243 Identities=25% Similarity=0.378 Sum_probs=201.9
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||+|+||.||+|+++.+++.||||++++.. ........|.+++..+. .||+|++++++|....++|+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~i~~~~~~~~~~~~~~lv~E 76 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-----KHPFLTALHCCFQTKDRLFFVME 76 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCeEEEEEe
Confidence 6899999999999999999999999998642 23344566777776653 36699999999999999999999
Q ss_pred eccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC-
Q 001034 952 LLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET- 1029 (1182)
Q Consensus 952 yL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~- 1029 (1182)
|+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 77 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~--~~~~kL~Dfg~~~~~~~ 148 (321)
T cd05591 77 YVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA--EGHCKLADFGMCKEGIL 148 (321)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEeecccceeccc
Confidence 9986 5655554332 2788999999999999999999999999999999999984 6789999999986432
Q ss_pred --CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccch
Q 001034 1030 --DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYK 1107 (1182)
Q Consensus 1030 --~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k 1107 (1182)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||...+....+..+.....
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~--------------- 213 (321)
T cd05591 149 NGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV--------------- 213 (321)
T ss_pred CCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------------
Confidence 223345789999999999999999999999999999999999999999888777766631100
Q ss_pred hhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-------CHHHHHcCCCCCC
Q 001034 1108 YFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-------SASDALKHPWLSH 1175 (1182)
Q Consensus 1108 ~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-------TAeELLqHPWFk~ 1175 (1182)
.. ....+.++.+||.+||+.||.+|| ++.++++||||..
T Consensus 214 --------------------~~---------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 214 --------------------LY---------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred --------------------CC---------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 00 112467899999999999999999 9999999999976
No 77
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-39 Score=355.08 Aligned_cols=244 Identities=24% Similarity=0.363 Sum_probs=199.8
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|.+..+++.||+|++.+.. ........|+++++.+. ||||++++++|.....+||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~------hp~i~~~~~~~~~~~~~~lv~ 74 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR------HPFLTALKYSFQTHDRLCFVM 74 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCCceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 22345566777777664 459999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
||+.+ +|..++.... .+++..++.++.||+.||.|||+ .||+||||||+|||++. ++.+||+|||++...
T Consensus 75 E~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~--~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 75 EYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDK--DGHIKITDFGLCKEG 146 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECC--CCCEEEecCCCCeec
Confidence 99986 4555544322 28899999999999999999997 79999999999999984 678999999998642
Q ss_pred C---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 T---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~------------- 213 (325)
T cd05594 147 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI------------- 213 (325)
T ss_pred CCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC-------------
Confidence 2 223345799999999999999999999999999999999999999988776665555421000
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
.. ....+..+.+||.+||++||.+|+ ++.++|+||||...
T Consensus 214 ----------------------~~---------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 214 ----------------------RF---------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred ----------------------CC---------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 00 123468899999999999999997 99999999999864
No 78
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.7e-39 Score=351.01 Aligned_cols=245 Identities=26% Similarity=0.405 Sum_probs=199.7
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|+++.+++.||||++++.. ........|..++..+. .||+|++++++|....++|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAW-----ENPFLTHLYCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhcc-----CCCCccCeeEEEEeCCEEEEEE
Confidence 36899999999999999999999999998643 22334555666665442 4669999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.+ +|..++.... .+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDR--DGHIKIADFGMCKENV 147 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEeCccCCCeecc
Confidence 99986 5666654322 2788999999999999999999999999999999999984 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...++..+.....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~-------------- 213 (316)
T cd05620 148 FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTP-------------- 213 (316)
T ss_pred cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--------------
Confidence 2233456789999999999999999999999999999999999999998877666555521000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-HHHHcCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-SDALKHPWLSHP 1176 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-eELLqHPWFk~~ 1176 (1182)
......+..+++||.+||+.||.+||++ .++++||||+..
T Consensus 214 ------------------------------~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 214 ------------------------------HYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 0011246789999999999999999998 588899999764
No 79
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=8.9e-39 Score=349.81 Aligned_cols=250 Identities=23% Similarity=0.330 Sum_probs=206.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+|++.+.||+|+||.||+|+++.+++.||||++++.. ........|..++..+.++ ++|++++++|.....
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~-----~~i~~~~~~~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP-----PFLTQLHSCFQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC-----CchhheeeEEecCCE
Confidence 4788999999999999999999999999999998643 2234456677777766544 489999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.| +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~--~~~ikL~Dfg~ 147 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS--EGHIKIADFGM 147 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEecccc
Confidence 9999999985 5666554322 2889999999999999999999999999999999999994 67899999999
Q ss_pred ccccCC---CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1025 SCFETD---HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1025 A~~~~~---~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+..... .....+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+....+..++.....
T Consensus 148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~-------- 219 (323)
T cd05615 148 CKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVS-------- 219 (323)
T ss_pred ccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------
Confidence 865322 233457899999999999999999999999999999999999999988877776666421100
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
. ....+..+.+||.+||+.+|.+|++ ..++++||||...
T Consensus 220 ---------------------------~---------p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 220 ---------------------------Y---------PKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ---------------------------C---------CccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 0 1124678999999999999999997 5799999999864
No 80
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-40 Score=379.77 Aligned_cols=252 Identities=26% Similarity=0.424 Sum_probs=217.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
..|...++||+|+-|.||.|....+++.||||.+.... ...+-+++|+.+|+.+.|. |||.+++.|.....++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~------NiVnfl~Sylv~deLW 346 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHP------NIVNFLDSYLVGDELW 346 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccch------HHHHHHHHhcccceeE
Confidence 56888889999999999999999999999999998654 3346688999999998765 9999999999999999
Q ss_pred EEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+|||||.|+ |.+.+.... +++.+++.|+++++.||+|||.+||||||||.+|||+.. +|.+||+|||+|.
T Consensus 347 VVMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~--~g~vKltDFGFca 417 (550)
T KOG0578|consen 347 VVMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM--DGSVKLTDFGFCA 417 (550)
T ss_pred EEEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc--CCcEEEeeeeeee
Confidence 999999964 555554332 899999999999999999999999999999999999995 6779999999997
Q ss_pred ccCC---CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETD---HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~---~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
.... ...+.+|||+|||||++....|+.++||||||+++.||+-|.+||.+.++...+..|. .-|.+.
T Consensus 418 qi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa-~ng~P~-------- 488 (550)
T KOG0578|consen 418 QISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-TNGTPK-------- 488 (550)
T ss_pred ccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh-hcCCCC--------
Confidence 6443 4567899999999999999999999999999999999999999999999888777763 112111
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
......++..|++||.+||+.||.+|++|.|||+||||+-.
T Consensus 489 --------------------------------lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 489 --------------------------------LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred --------------------------------cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 11223568999999999999999999999999999999544
No 81
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.8e-39 Score=360.41 Aligned_cols=284 Identities=24% Similarity=0.362 Sum_probs=216.9
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEEC--CCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDL--HTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk--~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
.++..+|++++.||.|+||.||+|... .+++.||+|.+.... ...+|+.+|+.++|+ ||++++++|..
T Consensus 88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~----~~~~E~~il~~l~h~------~iv~~~~~~~~ 157 (392)
T PHA03207 88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK----TPGREIDILKTISHR------AIINLIHAYRW 157 (392)
T ss_pred hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc----cHHHHHHHHHhcCCC------CccceeeeEee
Confidence 345678999999999999999999754 456889999987543 335789999988654 89999999999
Q ss_pred cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 943 REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 943 ~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
...+|+|||++.++|..++.... .+++..++.|+.||+.||.|||++||+||||||+|||++. .+.++|+||
T Consensus 158 ~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~--~~~~~l~Df 229 (392)
T PHA03207 158 KSTVCMVMPKYKCDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDE--PENAVLGDF 229 (392)
T ss_pred CCEEEEEehhcCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEccC
Confidence 99999999999999998884322 2889999999999999999999999999999999999984 678999999
Q ss_pred CCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhhcCCc
Q 001034 1023 GSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS---PATLLARVIGIIGPI 1094 (1182)
Q Consensus 1023 GLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d---~~elLakIv~ilGp~ 1094 (1182)
|+++..... ....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.. ....+..++..++..
T Consensus 230 G~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~ 309 (392)
T PHA03207 230 GAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVH 309 (392)
T ss_pred ccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccC
Confidence 998754332 224578999999999999999999999999999999999999997643 455667777766655
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
+..+....... +.+.. ..........+..|.. + .....+.++.+||++||++||.+|||+.+||.||||+
T Consensus 310 ~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 310 PLEFPQNGSTN---LCKHF---KQYAIVLRPPYTIPPV--I--RKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred ccccCCccchh---HHHHH---HhhcccccCCccccch--h--hccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 54332211100 00000 0000000000011100 0 1123467899999999999999999999999999998
Q ss_pred CC
Q 001034 1175 HP 1176 (1182)
Q Consensus 1175 ~~ 1176 (1182)
..
T Consensus 380 ~~ 381 (392)
T PHA03207 380 KE 381 (392)
T ss_pred cc
Confidence 64
No 82
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.9e-39 Score=359.27 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=207.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|++.+.||.|+||.||+|++..+++.||+|++.+.. .....+..|+.+++.++| |||++++++|...
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h------~~iv~~~~~~~~~ 115 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS------EWIVQLHYAFQDD 115 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC------CCcceEEEEEecC
Confidence 467999999999999999999999999999999997532 222345678888887754 5899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++|+||||+.| +|..++... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~--~~~~kL~Df 186 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcC--CCCEEEEec
Confidence 999999999985 566665432 2788889999999999999999999999999999999984 778999999
Q ss_pred CCccccCCC----cccccCCCcccchhhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1023 GSSCFETDH----LCSYVQSRSYRAPEVILGL----SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1023 GLA~~~~~~----~ss~vGTp~YmAPEVLlg~----~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|++...... ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+....+.+|+.....
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~- 265 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS- 265 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc-
Confidence 998754322 2356799999999999754 4789999999999999999999999988877776666421100
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK--RPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek--RPTAeELLqHPW 1172 (1182)
...| ....++.++.+||.+||+.+|.+ |+|+.+|++|||
T Consensus 266 --------------------------------~~~~-------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 266 --------------------------------LTFP-------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred --------------------------------CCCC-------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 0011 11235789999999999999987 999999999999
Q ss_pred CCC
Q 001034 1173 LSH 1175 (1182)
Q Consensus 1173 Fk~ 1175 (1182)
|+.
T Consensus 307 ~~~ 309 (370)
T cd05596 307 FKN 309 (370)
T ss_pred cCC
Confidence 986
No 83
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=6.5e-39 Score=349.60 Aligned_cols=245 Identities=25% Similarity=0.373 Sum_probs=202.0
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||.|+||+||+|.+..+++.||||++++.. ........|..+++.+. .||||++++++|....++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~h~~i~~~~~~~~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-----KHPFLTQLHSCFQTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 23445566777777664 4669999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.+ +|...+.... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~~~~~~ 147 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDS--EGHIKIADFGMCKEGI 147 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECC--CCcEEecccCCCeecC
Confidence 99986 5555554332 2889999999999999999999999999999999999984 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
.......++++.|+|||++.+..++.++|+|||||++|+|++|+.||.+.+....+..+....
T Consensus 148 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~--------------- 212 (318)
T cd05570 148 LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDE--------------- 212 (318)
T ss_pred cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---------------
Confidence 222344578999999999999999999999999999999999999998887766655553100
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHcCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-----SDALKHPWLSHP 1176 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-----eELLqHPWFk~~ 1176 (1182)
... ....+..+.+||++||+.||.+||++ .++++||||+..
T Consensus 213 --------------------~~~---------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 213 --------------------VRY---------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred --------------------CCC---------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 000 11346789999999999999999999 999999999774
No 84
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=368.68 Aligned_cols=260 Identities=25% Similarity=0.385 Sum_probs=216.2
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---------------hhhHHHHHHHHHHHHhcCCCCCC
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---------------DFFDQSLDEIKLLKYVNKHDPGD 929 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---------------~~~dq~l~EikILr~L~h~~~l~ 929 (1182)
....++|++++.||+|.||.|.+|++..+++.||||++.+.+ .-.+...+|+.||++|.|+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~---- 168 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHP---- 168 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCc----
Confidence 345689999999999999999999999999999999997642 2235788999999998764
Q ss_pred CcceEEEEEEEEec--CeEEEEEEecccChHHHHhhhcccCCccc-cCHHHHHHHHHHHHHHHHHHHhcCccccccCCcc
Q 001034 930 KYHLLRLYDYFYYR--EHLLIVCELLKANLYEFHKFNRESGGEVY-FTMPRLQSITIQCLEALQFLHGLGLIHCDLKPEN 1006 (1182)
Q Consensus 930 HPnIVkL~dsFqd~--e~LyLVmEyL~GsLld~Lk~~~~sggel~-Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeN 1006 (1182)
|||+|+.+..+. .++|||+|||..+-..... ...+ +.+.+++.|++.++.||+|||.+|||||||||+|
T Consensus 169 --nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN 240 (576)
T KOG0585|consen 169 --NVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN 240 (576)
T ss_pred --CeeEEEEeecCcccCceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 999999998876 6899999999865443322 2223 8999999999999999999999999999999999
Q ss_pred EEEccCCCceEEEecCCCccccCC--------CcccccCCCcccchhhhcCCC----CCchhhHHHHHHHHHHHHhCCCC
Q 001034 1007 ILVKSYSRCEVKVIDLGSSCFETD--------HLCSYVQSRSYRAPEVILGLS----YDKKIDIWSLGCILAELCTGNVL 1074 (1182)
Q Consensus 1007 ILIDs~~dG~IKLiDFGLA~~~~~--------~~ss~vGTp~YmAPEVLlg~~----yS~kSDIWSLGVILYELLTGr~P 1074 (1182)
+||+. .|+|||+|||.+..... .....+|||.|+|||++.+.. .+.+.|||||||+||.|+.|+.|
T Consensus 241 LLl~~--~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~P 318 (576)
T KOG0585|consen 241 LLLSS--DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLP 318 (576)
T ss_pred eEEcC--CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCC
Confidence 99995 68999999999875421 133479999999999998732 45789999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhc
Q 001034 1075 FQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLL 1154 (1182)
Q Consensus 1075 F~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkML 1154 (1182)
|.++...+++.+|+...-. +|. .+...+.+++||.+||
T Consensus 319 F~~~~~~~l~~KIvn~pL~-----------------------------------fP~-------~pe~~e~~kDli~~lL 356 (576)
T KOG0585|consen 319 FFDDFELELFDKIVNDPLE-----------------------------------FPE-------NPEINEDLKDLIKRLL 356 (576)
T ss_pred cccchHHHHHHHHhcCccc-----------------------------------CCC-------cccccHHHHHHHHHHh
Confidence 9999999999998622111 111 2244688999999999
Q ss_pred ccCCCCCCCHHHHHcCCCCCCC-CCCC
Q 001034 1155 EINPKKRPSASDALKHPWLSHP-YEPI 1180 (1182)
Q Consensus 1155 q~DPekRPTAeELLqHPWFk~~-~eP~ 1180 (1182)
++||.+|++..+|..|||.... -.|+
T Consensus 357 ~KdP~~Ri~l~~ik~Hpwvt~~g~~~~ 383 (576)
T KOG0585|consen 357 EKDPEQRITLPDIKLHPWVTRDGDSPQ 383 (576)
T ss_pred hcChhheeehhhheecceeccCCCCCc
Confidence 9999999999999999999887 4444
No 85
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8e-41 Score=404.65 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=215.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|+|+++||+|+||+|.+++.+.+++.||||++.+-. ....-+..|..+|...+.. ||+.|++.|++.
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~------Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSE------WIVQLHYAFQDE 147 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcH------HHHHHHHHhcCc
Confidence 478999999999999999999999999999999998732 3345566777887776544 999999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++|+|||||+| +|+.++.... .+++.-+++|+.+|+.||..||++|+|||||||+|||||. .|+|||+||
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~--~GHikLADF 219 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDK--SGHIKLADF 219 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecc--cCcEeeccc
Confidence 999999999996 5777766543 2899999999999999999999999999999999999995 888999999
Q ss_pred CCccccCC----CcccccCCCcccchhhhc----C-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1023 GSSCFETD----HLCSYVQSRSYRAPEVIL----G-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1023 GLA~~~~~----~~ss~vGTp~YmAPEVLl----g-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
|.|..... .....+|||+|++||++. + +.|+..||||||||++||||.|..||+.++..+++.+||..
T Consensus 220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h--- 296 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH--- 296 (1317)
T ss_pred hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch---
Confidence 99865442 245679999999999995 2 46999999999999999999999999999999999999722
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC---HHHHHcC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS---ASDALKH 1170 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT---AeELLqH 1170 (1182)
+-.+.+|. ...+|.++++||+++|+ +|+.|+. ++++-.|
T Consensus 297 ------------------------------k~~l~FP~-------~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 297 ------------------------------KESLSFPD-------ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred ------------------------------hhhcCCCc-------ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 00112221 12368999999999888 7999999 9999999
Q ss_pred CCCCCC
Q 001034 1171 PWLSHP 1176 (1182)
Q Consensus 1171 PWFk~~ 1176 (1182)
|||...
T Consensus 339 pFF~g~ 344 (1317)
T KOG0612|consen 339 PFFEGI 344 (1317)
T ss_pred ccccCC
Confidence 999764
No 86
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-39 Score=362.38 Aligned_cols=265 Identities=28% Similarity=0.401 Sum_probs=219.6
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
-.+.|++...||.|.-++||+|+...++..||||++..++ ...+.+..|+..+..+.| |||++++.+|....
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H------PNIv~~~~sFvv~~ 97 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH------PNIVTYHCSFVVDS 97 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC------CCcceEEEEEEecc
Confidence 3578999999999999999999999999999999998654 335677888888887755 49999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+++||.||. |+++++++..-..+ +.+..++.|+++++.||.|||.+|.||||||+.||||+ .+|.|||+|||
T Consensus 98 ~LWvVmpfMa~GS~ldIik~~~~~G----l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~--~dG~VkLadFg 171 (516)
T KOG0582|consen 98 ELWVVMPFMAGGSLLDIIKTYYPDG----LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID--SDGTVKLADFG 171 (516)
T ss_pred eeEEeehhhcCCcHHHHHHHHcccc----ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc--CCCcEEEcCce
Confidence 9999999999 57888888776554 99999999999999999999999999999999999999 48889999999
Q ss_pred CccccCCC-------cccccCCCcccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1024 SSCFETDH-------LCSYVQSRSYRAPEVILG--LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1024 LA~~~~~~-------~ss~vGTp~YmAPEVLlg--~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
.+...... ..+++||++|||||++.. .+|+.++||||||++..||.+|..||....+..++-.- +-+++
T Consensus 172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~t--Lqn~p 249 (516)
T KOG0582|consen 172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLT--LQNDP 249 (516)
T ss_pred eeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHH--hcCCC
Confidence 76432211 256799999999999754 47999999999999999999999999998888776443 33443
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
|... ... ........++..|+.||..||++||.+||||.++|+|+||+
T Consensus 250 p~~~-t~~-------------------------------~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk 297 (516)
T KOG0582|consen 250 PTLL-TSG-------------------------------LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK 297 (516)
T ss_pred CCcc-ccc-------------------------------CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence 3211 000 00111233456899999999999999999999999999998
Q ss_pred CCC
Q 001034 1175 HPY 1177 (1182)
Q Consensus 1175 ~~~ 1177 (1182)
+..
T Consensus 298 ~~k 300 (516)
T KOG0582|consen 298 KAK 300 (516)
T ss_pred hcc
Confidence 764
No 87
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.2e-38 Score=335.29 Aligned_cols=279 Identities=25% Similarity=0.422 Sum_probs=215.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.++|++.+.||.|+||.||++.++.+++.||||.+..... ....+.+|+.+++.++|+ ||+++++++....+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~------~i~~~~~~~~~~~~ 77 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHA------NIVTLHDIIHTKKT 77 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCc------ceeeEEEEEecCCe
Confidence 3689999999999999999999999999999999875431 223456799999988654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
.|+||||+.++|..++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++
T Consensus 78 ~~lv~e~~~~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~ 150 (291)
T cd07844 78 LTLVFEYLDTDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISE--RGELKLADFGLA 150 (291)
T ss_pred EEEEEecCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcC--CCCEEECccccc
Confidence 999999999988887764422 3788999999999999999999999999999999999985 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDS-PATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d-~~elLakIv~ilGp~PeemL~ 1100 (1182)
...... .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.... ..+.+..+...++.+....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 151 RAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred cccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 653321 222356788999999876 458899999999999999999999997655 566666676666665544433
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCc--HHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGD--QGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~S--eeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.......+.... ........+....+..+ ..+.+||.+||+++|.+|||+.++|+||||
T Consensus 231 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 231 GVSSNPEFKPYS--------------FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhhcccccccc--------------ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 322111111000 00000111111122233 789999999999999999999999999998
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-38 Score=349.38 Aligned_cols=293 Identities=24% Similarity=0.340 Sum_probs=213.5
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
..++|++.+.||.|+||.||++.+..++..+|+|++.... .....+.+|+++++.+.| +||++++++|....
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~ 76 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS------PYIVGFYGAFYSDG 76 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC------CcccceeEEEEECC
Confidence 4578999999999999999999999999999999987642 334567889999998865 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc-CccccccCCccEEEccCCCceEEEecC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL-GLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~-GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
++|+||||+.+ +|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+|||++. ++.+||+||
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~--~~~~kL~Df 148 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDF 148 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcC--CCCEEEeeC
Confidence 99999999985 7777775432 278888999999999999999974 7999999999999984 677999999
Q ss_pred CCccccCC-CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1023 GSSCFETD-HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1023 GLA~~~~~-~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
|++..... ......+++.|+|||++.+..++.++|||||||++|+|++|+.||...........+ +.........
T Consensus 149 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~ 224 (333)
T cd06650 149 GVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMF----GCPVEGDPAE 224 (333)
T ss_pred CcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHh----cCcccCCccc
Confidence 99875433 233457899999999999989999999999999999999999999876654433222 1111100000
Q ss_pred ccccc--hhhcccchhhhhhcc-----hhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1102 GRDTY--KYFTKNHMLYERNQE-----TNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1102 ~k~s~--k~F~k~~~~~er~~e-----ts~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
..... .........+..... ......... ...........+.++++||.+||++||.+|||+.+||+||||+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~ 303 (333)
T cd06650 225 SETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVN-EPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIK 303 (333)
T ss_pred cccCcccCCccchhhhhcccccccccHHHHHHHHhc-CCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHh
Confidence 00000 000000000000000 000000000 0000011123578899999999999999999999999999998
Q ss_pred CCCC
Q 001034 1175 HPYE 1178 (1182)
Q Consensus 1175 ~~~e 1178 (1182)
....
T Consensus 304 ~~~~ 307 (333)
T cd06650 304 RSEA 307 (333)
T ss_pred cCcc
Confidence 7754
No 89
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.2e-39 Score=358.56 Aligned_cols=254 Identities=20% Similarity=0.334 Sum_probs=206.1
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|++.+.||+|+||.||+|.++.+++.||+|++.+.. .....+..|+.+++.+.| |||++++++|...
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h------p~iv~~~~~~~~~ 115 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS------PWVVQLFCAFQDD 115 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC------CCEeeEEEEEEcC
Confidence 467999999999999999999999999999999997532 223345677777777654 5999999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++|+||||+.| +|.+++... .+++..++.++.||+.||.|||+++|+||||||+|||++. .+.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~--~~~~kL~DF 186 (370)
T cd05621 116 KYLYMVMEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDK--HGHLKLADF 186 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC--CCCEEEEec
Confidence 999999999985 677766432 2788899999999999999999999999999999999984 778999999
Q ss_pred CCccccCCC----cccccCCCcccchhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1023 GSSCFETDH----LCSYVQSRSYRAPEVILGLS----YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1023 GLA~~~~~~----~ss~vGTp~YmAPEVLlg~~----yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|++...... ....+||+.|+|||++.+.. ++.++|||||||+||+|++|++||...+....+.+|+.....+
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (370)
T cd05621 187 GTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 266 (370)
T ss_pred ccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc
Confidence 999764322 23567999999999997643 7899999999999999999999999888777776664211100
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK--RPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek--RPTAeELLqHPW 1172 (1182)
..|. ....+..+++||.+||..+|.+ |+|+.++++|||
T Consensus 267 ---------------------------------~~p~-------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 267 ---------------------------------NFPE-------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ---------------------------------CCCC-------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 0111 1234688999999999865543 899999999999
Q ss_pred CCCC
Q 001034 1173 LSHP 1176 (1182)
Q Consensus 1173 Fk~~ 1176 (1182)
|+..
T Consensus 307 ~~~~ 310 (370)
T cd05621 307 FKND 310 (370)
T ss_pred cCCC
Confidence 9863
No 90
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2e-38 Score=337.94 Aligned_cols=282 Identities=29% Similarity=0.474 Sum_probs=221.1
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch------hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD------FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~------~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+|++.+.||.|+||.||+|.+..+++.||||.++.... ....+..|+.+++.+.| +||+++++++...
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~ 74 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH------PNIIGLLDVFGHK 74 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC------CCChhhhheeecC
Confidence 58899999999999999999999999999999976532 23345567888877754 4899999999999
Q ss_pred CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 944 EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 944 e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..+|+||||+.++|..++.... ..+++..+..++.||+.||.|||++||+|+||+|+|||++. ++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg 147 (298)
T cd07841 75 SNINLVFEFMETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS--DGVLKLADFG 147 (298)
T ss_pred CEEEEEEcccCCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcC--CCCEEEccce
Confidence 9999999999778888876432 13889999999999999999999999999999999999995 6789999999
Q ss_pred CccccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1024 SSCFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1024 LA~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
++...... .....+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+....+.++...++.+....+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (298)
T cd07841 148 LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENW 227 (298)
T ss_pred eeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhh
Confidence 98765432 223456788999999865 46789999999999999999999999988887778777766655443332
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
........+ ..........+.......+..+++||.+||.++|.+|||+.+||+||||++.+.|
T Consensus 228 ~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~ 291 (298)
T cd07841 228 PGVTSLPDY----------------VEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAP 291 (298)
T ss_pred hhccccccc----------------ccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCC
Confidence 211110000 0000011111222334557899999999999999999999999999999998877
Q ss_pred C
Q 001034 1180 I 1180 (1182)
Q Consensus 1180 ~ 1180 (1182)
-
T Consensus 292 ~ 292 (298)
T cd07841 292 T 292 (298)
T ss_pred C
Confidence 4
No 91
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.5e-38 Score=332.55 Aligned_cols=273 Identities=32% Similarity=0.534 Sum_probs=216.6
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--CeE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--EHL 946 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e~L 946 (1182)
|++++.||.|+||.||++.+..+++.||+|++++... .......|+.+++++. .|+||+++++++.+. ..+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-----PHPNILRLIEVLFDRKTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-----CCCCccceEEEEecCCCCcE
Confidence 6789999999999999999999999999999876421 1223346777777664 255999999999988 899
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
++||||+.++++.++..... .+++..++.++.||+.||.|||+.+++||||+|+||+++. +.+||+|||++.
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~---~~~kl~dfg~~~ 147 (282)
T cd07831 76 ALVFELMDMNLYELIKGRKR-----PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD---DILKLADFGSCR 147 (282)
T ss_pred EEEEecCCccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC---CCeEEEeccccc
Confidence 99999999999888765331 3889999999999999999999999999999999999994 789999999987
Q ss_pred ccCCC--cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDH--LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~--~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....+++.|+|||++.. ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++.++..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence 64332 233467889999998754 457889999999999999999999999999988899998888877765532111
Q ss_pred ccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.. ....+..|. ...+....+..+..+++||.+||.++|.+|||+.++|+||||
T Consensus 228 ~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 228 KS-----------------RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cc-----------------ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 00 000011111 111122234568999999999999999999999999999998
No 92
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.2e-38 Score=338.91 Aligned_cols=288 Identities=27% Similarity=0.459 Sum_probs=214.6
Q ss_pred CEEEEEEeccCCceEEEEEEECC--CCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLH--TGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~--TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+|++.+.||.|+||.||+|+++. +++.||+|++.... .......+|+.+++.++| |||++++++|...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH------ENVVSLVEVFLEH 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC------CCccceEEEEeCC
Confidence 58999999999999999999988 89999999998632 334566788888888865 4899999999988
Q ss_pred --CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC--CCceEEE
Q 001034 944 --EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY--SRCEVKV 1019 (1182)
Q Consensus 944 --e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~--~dG~IKL 1019 (1182)
..+|+||||+.+++..++....... ...+++..++.++.||+.||.|||+.+|+||||||+|||++.. ..+.+||
T Consensus 75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 75 ADKSVYLLFDYAEHDLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred CCceEEEEEeCCCcCHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEE
Confidence 8899999999999888776544322 2348899999999999999999999999999999999999831 1678999
Q ss_pred ecCCCccccCCCc------ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---------HH
Q 001034 1020 IDLGSSCFETDHL------CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPA---------TL 1083 (1182)
Q Consensus 1020 iDFGLA~~~~~~~------ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~---------el 1083 (1182)
+|||++....... ...++++.|+|||++.+. .++.++|||||||++|+|++|++||.+.... ..
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 154 GDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 9999987643321 234678899999998764 5889999999999999999999999765432 34
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
+..++..++.++...+........+. ...... .....+. ...........+..+.+||.+||++||++|
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 304 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYD-TLMKDF--------KTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKR 304 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccch-hhhhhc--------cCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccC
Confidence 55666666654443322111111000 000000 0000000 000001112557899999999999999999
Q ss_pred CCHHHHHcCCCC
Q 001034 1162 PSASDALKHPWL 1173 (1182)
Q Consensus 1162 PTAeELLqHPWF 1173 (1182)
||+.+|++||||
T Consensus 305 ps~~eil~~~~f 316 (316)
T cd07842 305 ITAEEALEHPYF 316 (316)
T ss_pred cCHHHHhcCCCC
Confidence 999999999998
No 93
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=5e-38 Score=330.89 Aligned_cols=278 Identities=27% Similarity=0.456 Sum_probs=214.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+.|+ ||++++++|....+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~------~i~~~~~~~~~~~~ 74 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHP------NLVNLIEVFRRKRK 74 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCC------CEeeeeeEEeeCCE
Confidence 47999999999999999999999999999999987543 2234567889999888654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||++++++..+..... .+++..++.++.||+.||.|||+.+++|+||||+||+++. ++.++|+|||++
T Consensus 75 ~~~v~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~ 147 (286)
T cd07847 75 LHLVFEYCDHTVLNELEKNPR-----GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK--QGQIKLCDFGFA 147 (286)
T ss_pred EEEEEeccCccHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC--CCcEEECccccc
Confidence 999999999887766543321 2889999999999999999999999999999999999984 678999999998
Q ss_pred cccCCCc---ccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1026 CFETDHL---CSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1026 ~~~~~~~---ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
....... ....++..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd07847 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQI 227 (286)
T ss_pred eecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 7654322 24467889999999876 4588999999999999999999999998877777766665555433211110
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccc-cccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIP-KKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liP-k~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.. ...++.. .....+ ....+....+..+..+.+||.+||+.+|++|||+.++|.||||
T Consensus 228 ~~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 228 FS-TNQFFKG-------------LSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred cc-ccccccc-------------ccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 00 0000000 000000 0011112234567899999999999999999999999999998
No 94
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.2e-38 Score=347.91 Aligned_cols=245 Identities=25% Similarity=0.391 Sum_probs=198.8
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|.+..+++.||||++++.. ........|..++..+ ..||||++++++|....++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~i~~~~~~~~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-----WEHPFLTHLFCTFQTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-----cCCCCccceeeEEEcCCEEEEEE
Confidence 36899999999999999999999999998643 2223344555555443 24679999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.| +|..++.... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++....
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~--~~~~kL~Dfg~a~~~~ 147 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDK--DGHIKIADFGMCKENM 147 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECC--CCCEEEccCcCCeECC
Confidence 99985 5655554332 2889999999999999999999999999999999999984 6789999999987432
Q ss_pred ---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1030 ---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1030 ---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...++..+......
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~------------- 214 (316)
T cd05592 148 NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPH------------- 214 (316)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------------
Confidence 2234567899999999999999999999999999999999999999988877666655311100
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-HHHHcCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-SDALKHPWLSHP 1176 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-eELLqHPWFk~~ 1176 (1182)
.....+..+.+||.+||+.||.+||++ .++++||||...
T Consensus 215 -------------------------------~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 215 -------------------------------FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred -------------------------------CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 012246789999999999999999986 588899999764
No 95
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.2e-38 Score=348.33 Aligned_cols=244 Identities=25% Similarity=0.369 Sum_probs=200.9
Q ss_pred EEeccCCceEEEEEEEC---CCCcEEEEEEEeccc-----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 875 EYLGSAAFSKAIQAHDL---HTGMDVCVKIIKNNK-----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk---~TGr~VAVKIIkk~k-----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+.||+|+||.||+|++. .+++.||||++++.. ........|+.+++.+.| |||+++++.|.....+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~iv~~~~~~~~~~~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH------PFIVDLIYAFQTGGKL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC------CchhceeeEEecCCeE
Confidence 57999999999999864 578999999997542 223455678888888754 5999999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++.... .+.+..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~kl~Dfg~~ 147 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDA--QGHVKLTDFGLC 147 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEeeCcCC
Confidence 999999986 5666665432 2788889999999999999999999999999999999984 678999999998
Q ss_pred cccC---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFET---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|++||...+....+.++.....
T Consensus 148 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~---------- 217 (323)
T cd05584 148 KESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL---------- 217 (323)
T ss_pred eecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC----------
Confidence 6422 223345789999999999999999999999999999999999999988877666655531100
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
...+..+..+.+||++||++||.+|| ++.++++||||...
T Consensus 218 ----------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 218 ----------------------------------NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred ----------------------------------CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 01123467899999999999999999 89999999999764
No 96
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.9e-38 Score=346.71 Aligned_cols=245 Identities=26% Similarity=0.420 Sum_probs=199.8
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||+||+|++..+++.||||+++... ........|..++..+ ..||||++++++|....++|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~iv~~~~~~~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----WEHPFLTHLYCTFQTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCcCcceEEEEEeCCEEEEEE
Confidence 36899999999999999999999999998642 2233445566666543 24679999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.+ +|..++.... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++...
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~--~~~~kl~Dfg~~~~~~ 147 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDT--DGHIKIADFGMCKENM 147 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECC--CCCEEEccCCcceECC
Confidence 99985 6766665432 2788899999999999999999999999999999999985 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+++..+....
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--------------- 212 (316)
T cd05619 148 LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--------------- 212 (316)
T ss_pred CCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------------
Confidence 223345678999999999999999999999999999999999999998877766655542100
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHH-HHHcCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSAS-DALKHPWLSHP 1176 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAe-ELLqHPWFk~~ 1176 (1182)
+. .....+..+.+||.+||+.||.+||++. ++++||||...
T Consensus 213 -----------------------~~------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 213 -----------------------PC------YPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred -----------------------CC------CCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 00 0112467899999999999999999997 89999999764
No 97
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3.3e-38 Score=346.43 Aligned_cols=256 Identities=18% Similarity=0.274 Sum_probs=203.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||+|+||.||++++..+++.||||++.+.. .....+..|+.++..+. |+||++++++|....
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGD------RRWITNLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCCCceEEEEecCC
Confidence 47999999999999999999999999999999997532 22334566777777664 458999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|+||||+.| +|..++..... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~Dfg 147 (331)
T cd05597 75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK--NGHIRLADFG 147 (331)
T ss_pred eEEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC--CCCEEEEECC
Confidence 99999999975 67777654321 2888999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCC----cccccCCCcccchhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1024 SSCFETDH----LCSYVQSRSYRAPEVILG-----LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1024 LA~~~~~~----~ss~vGTp~YmAPEVLlg-----~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
++...... ....+||+.|+|||++.. ..++.++|||||||++|+|++|+.||.+.+..+.+..++.....
T Consensus 148 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~- 226 (331)
T cd05597 148 SCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH- 226 (331)
T ss_pred ceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc-
Confidence 98654322 123468999999999973 45788999999999999999999999988777766665311000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK--RPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek--RPTAeELLqHPW 1172 (1182)
.. +.......+..+++||++||+.++.+ |+++.++|+|||
T Consensus 227 --------------------------------~~------~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 227 --------------------------------FQ------FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred --------------------------------cc------CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 00 01112235789999999999765544 789999999999
Q ss_pred CCCC
Q 001034 1173 LSHP 1176 (1182)
Q Consensus 1173 Fk~~ 1176 (1182)
|...
T Consensus 269 ~~~~ 272 (331)
T cd05597 269 FEGI 272 (331)
T ss_pred CCCC
Confidence 9763
No 98
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.5e-38 Score=348.85 Aligned_cols=244 Identities=22% Similarity=0.337 Sum_probs=195.7
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|++..+++.||||++++.. .....+..|..++..+. .||||++++++|.....+||||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~Iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCCCceEEEEEcCCEEEEEE
Confidence 36899999999999999999999999998642 23345667778877764 3569999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.| +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~--~~~~kL~Dfg~~~~~~ 147 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYGMCKEGI 147 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEECcCccccccc
Confidence 99986 5655554332 2899999999999999999999999999999999999984 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------H-HHHHHHhhcCCcchh
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPA--------T-LLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~--------e-lLakIv~ilGp~Pee 1097 (1182)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...... . ....+.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~--------- 218 (329)
T cd05588 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL--------- 218 (329)
T ss_pred cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH---------
Confidence 22334568999999999999999999999999999999999999999532110 0 000000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC------HHHHHcCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS------ASDALKHP 1171 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT------AeELLqHP 1171 (1182)
.... ......+..+.+||++||++||.+|++ +.++++||
T Consensus 219 --------------------------------~~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05588 219 --------------------------------EKQI---RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHP 263 (329)
T ss_pred --------------------------------cCCC---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCC
Confidence 0000 011235788999999999999999987 78999999
Q ss_pred CCCC
Q 001034 1172 WLSH 1175 (1182)
Q Consensus 1172 WFk~ 1175 (1182)
||..
T Consensus 264 ~~~~ 267 (329)
T cd05588 264 FFRN 267 (329)
T ss_pred CCCC
Confidence 9975
No 99
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.6e-39 Score=355.07 Aligned_cols=278 Identities=23% Similarity=0.273 Sum_probs=208.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
..|++++.||.|+||.||+|.+..+++.||+|+..... ...|+.+++.++| +||++++++|......|+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-----~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-----TLIEAMLLQNVNH------PSVIRMKDTLVSGAITCM 134 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-----cHHHHHHHHhCCC------CCCcChhheEEeCCeeEE
Confidence 46999999999999999999999999999999865432 3468888888765 489999999999999999
Q ss_pred EEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 949 VCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 949 VmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||++.++|+.++..... .+++..++.|+.||+.||.|||++||+||||||+|||++. .+.+||+|||++...
T Consensus 135 v~e~~~~~l~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRSR-----PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND--VDQVCIGDLGAAQFP 207 (357)
T ss_pred EEEccCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEecCcccccc
Confidence 999999999988865432 3889999999999999999999999999999999999984 677999999998753
Q ss_pred CC--CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCC-CCCCCCC---------HHHHHHHHHhhcCCcch
Q 001034 1029 TD--HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGN-VLFQNDS---------PATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1029 ~~--~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr-~PF~g~d---------~~elLakIv~ilGp~Pe 1096 (1182)
.. ......||+.|+|||++.+..++.++|||||||++|+|+++. ++|.... ....+..++..++..|.
T Consensus 208 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 287 (357)
T PHA03209 208 VVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPE 287 (357)
T ss_pred ccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChh
Confidence 32 233467899999999999999999999999999999999855 4444321 12334455555554444
Q ss_pred hhhhcccc-cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1097 GMLAKGRD-TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1097 emL~~~k~-s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
.+...... ....|. .. ... ...|............+..+.+||.+||++||.+||||.|||+||||+.
T Consensus 288 ~~~~~~~~~~~~~~~-------~~---~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 288 EFPRDPGSRLVRGFI-------EY---ASL-ERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred hcCCCCccHHHHHHH-------hh---ccc-CCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 33211000 000000 00 000 0000000000011245678889999999999999999999999999986
No 100
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.7e-39 Score=348.79 Aligned_cols=243 Identities=26% Similarity=0.370 Sum_probs=197.1
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHH-HHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKL-LKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikI-Lr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||+|+||+||+|+++.+++.||||++.+... .......|..+ ++.+ .||||+++++.|.....+|+|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l------~hp~iv~~~~~~~~~~~~~lv 74 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV------KHPFLVGLHYSFQTADKLYFV 74 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC------CCCCCCCeeEEEEeCCEEEEE
Confidence 368999999999999999999999999975431 12233344333 3333 466999999999999999999
Q ss_pred EEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~--~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 75 LDYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (323)
T ss_pred EcCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECC--CCcEEEeccCCCccc
Confidence 999986 5666554332 2888999999999999999999999999999999999984 678999999998643
Q ss_pred C---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 T---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+++..+....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-------------- 212 (323)
T cd05575 147 IEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP-------------- 212 (323)
T ss_pred ccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--------------
Confidence 2 22334578999999999999999999999999999999999999999888777666653100
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH----HHHHcCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA----SDALKHPWLSH 1175 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA----eELLqHPWFk~ 1175 (1182)
....+..+..+.+||++||+.||.+||++ .++++||||..
T Consensus 213 ------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~ 256 (323)
T cd05575 213 ------------------------------LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSS 256 (323)
T ss_pred ------------------------------CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCC
Confidence 00112347889999999999999999998 69999999975
No 101
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-39 Score=345.82 Aligned_cols=259 Identities=25% Similarity=0.389 Sum_probs=218.7
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
....++|++.+.||+|-||.||+|+.+.++..||+|++.+... ....-+.++.+.+.-...+.||||+++|++|.+..
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi--~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI--LKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH--HHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 3445789999999999999999999999999999999987652 22222333333333334456779999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+||++||.. |.++..+...+.. .|.+..++.|++|++.||.|+|..+||||||||+|+|++. .+.+||+|||
T Consensus 96 riyLilEya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~--~~~lkiAdfG 169 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS--AGELKIADFG 169 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC--CCCeeccCCC
Confidence 9999999998 6788877743322 3899999999999999999999999999999999999995 7789999999
Q ss_pred Ccccc-CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1024 SSCFE-TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1024 LA~~~-~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
.+... .....+.|||..|.|||.+.+..++..+|+|++|++.||+|+|.+||.+.+..+++++|.+..-.
T Consensus 170 wsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~--------- 240 (281)
T KOG0580|consen 170 WSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLK--------- 240 (281)
T ss_pred ceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcccc---------
Confidence 98765 44566889999999999999999999999999999999999999999999999999998532222
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
+| ..++..+.|||.+||..+|.+|++..|++.|||+..
T Consensus 241 --------------------------~p---------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 241 --------------------------FP---------STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred --------------------------CC---------cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 22 245788999999999999999999999999999864
No 102
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=358.61 Aligned_cols=255 Identities=29% Similarity=0.413 Sum_probs=206.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch-hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC--e
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD-FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE--H 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~-~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e--~ 945 (1182)
.+|...+.||+|+||.||++.+..+|..+|||.+..... ..+...+|+.+|.+++|+ +||++++...... .
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p------~IV~~~G~~~~~~~~~ 90 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHP------NIVQYYGSSSSRENDE 90 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCC------CEEeeCCccccccCee
Confidence 457888999999999999999999999999999876531 145678899999999744 8999999755554 6
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
++|+|||+. |+|.+++..... .+++..++.+++||+.||.|||++|||||||||+|||++. .++.+||+|||+
T Consensus 91 ~~i~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~-~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 91 YNIFMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP-SNGDVKLADFGL 164 (313)
T ss_pred eEeeeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC-CCCeEEeccCcc
Confidence 999999999 578888876542 2999999999999999999999999999999999999994 257899999999
Q ss_pred ccccCC------CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhcCCcch
Q 001034 1025 SCFETD------HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQN-DSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1025 A~~~~~------~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~elLakIv~ilGp~Pe 1096 (1182)
+..... ......||+.|||||++... ....++|||||||++.||+||++||.. ....+.+-.|..
T Consensus 165 a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~------- 237 (313)
T KOG0198|consen 165 AKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGR------- 237 (313)
T ss_pred ccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhc-------
Confidence 875442 23467899999999999963 334599999999999999999999976 333332222210
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
...........+.++++||++||.+||++||||.++|+|||++..
T Consensus 238 -----------------------------------~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 238 -----------------------------------EDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred -----------------------------------cCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 000112223468899999999999999999999999999999765
Q ss_pred C
Q 001034 1177 Y 1177 (1182)
Q Consensus 1177 ~ 1177 (1182)
.
T Consensus 283 ~ 283 (313)
T KOG0198|consen 283 S 283 (313)
T ss_pred c
Confidence 4
No 103
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7.8e-38 Score=332.28 Aligned_cols=283 Identities=29% Similarity=0.440 Sum_probs=218.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|+++... .....+.+|+.+++.+.+ |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~~~ 75 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE-----SIYIVRLLDVEHVEEK 75 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC-----CCCccceeeeEeecCC
Confidence 46999999999999999999999999999999987543 223467789999998864 3589999999987766
Q ss_pred -----EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 946 -----LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 946 -----LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
.|+||||+.++|..++...... ....+++..++.++.||+.||.|||+.+|+||||+|+|||++. .++.+||+
T Consensus 76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-~~~~~kl~ 153 (295)
T cd07837 76 NGKPSLYLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-QKGLLKIA 153 (295)
T ss_pred CCCceEEEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-CCCeEEEe
Confidence 8999999999998887654322 1234899999999999999999999999999999999999984 36789999
Q ss_pred cCCCccccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1021 DLGSSCFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1021 DFGLA~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
|||++...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+....+..+...++.++.
T Consensus 154 dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (295)
T cd07837 154 DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTE 233 (295)
T ss_pred ecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 99998754322 223356888999999875 45789999999999999999999999998888877777766554443
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
..+......... ..+.......+....+..+..+.+||.+||.+||.+||++.++|.||||+
T Consensus 234 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 234 QVWPGVSKLRDW----------------HEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred hhCcchhhccch----------------hhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 322211100000 00000000011122345678999999999999999999999999999995
No 104
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=3.1e-38 Score=333.63 Aligned_cols=277 Identities=29% Similarity=0.465 Sum_probs=217.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.|++++.||.|+||.||+|++..+++.||||.+.... .....+..|+.+++.++| |||+++++++.....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~ 74 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH------PNIVKLLDVIHTENKL 74 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC------CCCcchhhhcccCCcE
Confidence 4889999999999999999999999999999987542 223467789999998865 4899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.++|..++..... ..+++..++.++.||+.||.|||+.+++|+||+|+||+++. ++.+||+|||++.
T Consensus 75 ~~v~e~~~~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~--~~~~~l~dfg~~~ 148 (284)
T cd07860 75 YLVFEFLHQDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINT--EGAIKLADFGLAR 148 (284)
T ss_pred EEEeeccccCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEeeccchh
Confidence 99999999888887765432 13788999999999999999999999999999999999994 6789999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGLS-YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~~-yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... .....+++.|+|||++.+.. ++.++|||||||++|+|+||+.||...+....+.++...++.++..++...
T Consensus 149 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07860 149 AFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 228 (284)
T ss_pred hcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhh
Confidence 54322 22345688899999987654 688999999999999999999999998888888888877776654433211
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.....+ .. .+.......+....+..+..+++||.+||+.||.+|||+.++|+||||
T Consensus 229 ~~~~~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 229 TSLPDY----KP-----------SFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred hHHHHH----Hh-----------hcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 100000 00 000000011112234467889999999999999999999999999998
No 105
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.7e-38 Score=333.49 Aligned_cols=282 Identities=25% Similarity=0.407 Sum_probs=222.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|++.+.||.|+||.||++.++.+++.||+|.+.... .....+..|+.+++.+.|+ ||+++++++....+
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~ 75 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG------NIVRLQDVVHSEKR 75 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCC------CEeeEEEEEecCCe
Confidence 57999999999999999999999999999999986542 2234567888999888654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
.|+||||+++++..++..... ..+++..++.++.||+.||.|||+++++|+||+|+||+++. ..+.+||+|||++
T Consensus 76 ~~lv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~-~~~~~kl~dfg~~ 150 (294)
T PLN00009 76 LYLVFEYLDLDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR-RTNALKLADFGLA 150 (294)
T ss_pred EEEEEecccccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC-CCCEEEEcccccc
Confidence 999999999988887754322 23678888999999999999999999999999999999984 3457999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+....+.++....+.+...++..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred cccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 754322 233466889999999876 4578999999999999999999999999888888888877777665555432
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
......+.. . ........+....+..+..+.+||.+||..+|++||++.++|+||||.+.
T Consensus 231 ~~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 231 VTSLPDYKS-------------A--FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred cccchhhhh-------------h--cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence 221111100 0 00000011112234567889999999999999999999999999999875
No 106
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=4.5e-38 Score=336.41 Aligned_cols=255 Identities=22% Similarity=0.278 Sum_probs=204.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.|++.+.||+|+||+||++.+..+++.||||++.... .....+.+|+.+++.++|+ +|+++++.|....+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~~ 74 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR------FVVSLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCC------CEeeeeeeecCCCe
Confidence 4889999999999999999999999999999997542 1223456788888888654 89999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.+ +|..++..... ..+++..+..++.||+.||.|||+.+|+||||||+|||++. .+.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05605 75 LCLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECC--CCCEEEeeCCC
Confidence 9999999986 55555433211 23889999999999999999999999999999999999984 67899999999
Q ss_pred ccccCC--CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1025 SCFETD--HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1025 A~~~~~--~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
+..... .....++++.|+|||++.+..++.++|||||||++|+|++|+.||.+.........+...+...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~------- 221 (285)
T cd05605 149 AVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQ------- 221 (285)
T ss_pred ceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcc-------
Confidence 876432 22345789999999999999999999999999999999999999987655433333211100000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
......++..+.+||.+||..||.+|| ++.+|++||||...
T Consensus 222 ---------------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 222 ---------------------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred ---------------------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 001123578899999999999999999 99999999999863
No 107
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.6e-39 Score=349.66 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=197.6
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||+|+||+||+|+++.+++.||||++.+.. ........|..++..+.. ..||+|+++++.|....++|+||||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~---~~~p~i~~~~~~~~~~~~~~lv~e~ 77 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLL---DESPFIVGLKFSFQTDSDLYLVTDY 77 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhcc---CCCCcCcceEEEEecCCeEEEEEcC
Confidence 699999999999999999999999997542 122334455556555432 2477999999999999999999999
Q ss_pred ccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC--
Q 001034 953 LKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET-- 1029 (1182)
Q Consensus 953 L~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~-- 1029 (1182)
+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 78 ~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~a~~~~~~ 149 (330)
T cd05586 78 MSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA--TGHIALCDFGLSKANLTD 149 (330)
T ss_pred CCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEecCCcCcCCCCC
Confidence 985 5666654322 2889999999999999999999999999999999999984 6789999999986432
Q ss_pred -CCcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccch
Q 001034 1030 -DHLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYK 1107 (1182)
Q Consensus 1030 -~~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k 1107 (1182)
......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+..+.+..+.....
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~--------------- 214 (330)
T cd05586 150 NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKV--------------- 214 (330)
T ss_pred CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCC---------------
Confidence 223456799999999999765 589999999999999999999999998887766665521000
Q ss_pred hhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC----CHHHHHcCCCCCCC
Q 001034 1108 YFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1108 ~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP----TAeELLqHPWFk~~ 1176 (1182)
.+| ....+..+.+||++||+.||.+|| ++.++++||||...
T Consensus 215 --------------------~~~--------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 215 --------------------RFP--------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred --------------------CCC--------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 001 012468899999999999999998 79999999999753
No 108
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=9.5e-38 Score=332.45 Aligned_cols=281 Identities=24% Similarity=0.408 Sum_probs=216.6
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
.++|++.+.||.|+||.||+|.+..+++.||||++.... .......+|+.+++.+.|+ +|+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~iv~~~~~~~~~~ 84 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHE------NVVNLIEICRTKA 84 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCC------CccceEEEEeccc
Confidence 367999999999999999999999999999999986532 2223456788888888654 8999999887654
Q ss_pred --------eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCce
Q 001034 945 --------HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCE 1016 (1182)
Q Consensus 945 --------~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~ 1016 (1182)
..|+||||+.+++..++.... ..+++..++.++.||+.||.|||++|++|+||||+|||++. ++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~ 157 (310)
T cd07865 85 TPYNRYKGSFYLVFEFCEHDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITK--DGI 157 (310)
T ss_pred ccccCCCceEEEEEcCCCcCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECC--CCc
Confidence 459999999998887775432 13889999999999999999999999999999999999984 678
Q ss_pred EEEecCCCccccCCCc-------ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 001034 1017 VKVIDLGSSCFETDHL-------CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1017 IKLiDFGLA~~~~~~~-------ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv 1088 (1182)
+||+|||++....... ....++..|+|||++.+. .++.++|+||||+++|+|++|++||.+.+....+..+.
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~ 237 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999986543221 234567889999998765 47889999999999999999999999998888888888
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
.+.+.++..++..... ...+.... ...... ...+ ..+ .....+..+++||.+||..||.+|||+.++|
T Consensus 238 ~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~-----~~~~--~~l--~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 238 QLCGSITPEVWPGVDK-LELFKKME--LPQGQK-----RKVK--ERL--KPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred HHhCCCChhhcccccc-hhhhhhcc--CCCccc-----hhhH--Hhc--ccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 8888877766543321 11111000 000000 0000 000 1112467889999999999999999999999
Q ss_pred cCCCC
Q 001034 1169 KHPWL 1173 (1182)
Q Consensus 1169 qHPWF 1173 (1182)
+||||
T Consensus 306 ~h~~f 310 (310)
T cd07865 306 NHDFF 310 (310)
T ss_pred cCCCC
Confidence 99998
No 109
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=364.89 Aligned_cols=261 Identities=30% Similarity=0.460 Sum_probs=232.4
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
-.+++-|.+.+.||+|.|+.|-+|++..+|..||||++.+.+ ....+++.|++.++.++|+ |||+||.+..
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHp------NiVRLYEViD 87 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHP------NIVRLYEVID 87 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCc------Ceeeeeehhc
Confidence 346788999999999999999999999999999999998765 3456788999999998765 8999999998
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
....+|||+|+-.+ +|++|+-.... + +.+..++.|+.||+.||.|||+..+|||||||+||.+.. +-|.|||+
T Consensus 88 TQTKlyLiLELGD~GDl~DyImKHe~-G----l~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE-KlGlVKLT 161 (864)
T KOG4717|consen 88 TQTKLYLILELGDGGDLFDYIMKHEE-G----LNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE-KLGLVKLT 161 (864)
T ss_pred ccceEEEEEEecCCchHHHHHHhhhc-c----ccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee-ecCceEee
Confidence 88999999999885 89999876643 2 899999999999999999999999999999999999875 67899999
Q ss_pred cCCCccc--cCCCcccccCCCcccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1021 DLGSSCF--ETDHLCSYVQSRSYRAPEVILGLSYD-KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1021 DFGLA~~--~~~~~ss~vGTp~YmAPEVLlg~~yS-~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
|||++-. .+....+.||+..|.|||+++|..|+ +++||||||||||-|+||++||.-.+..+++..||.+...+|.
T Consensus 162 DFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs- 240 (864)
T KOG4717|consen 162 DFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS- 240 (864)
T ss_pred eccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch-
Confidence 9999853 45567889999999999999999998 6889999999999999999999999999999999865544443
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.++.++++||..||..||.+|.+.++|..|+|++..-
T Consensus 241 -------------------------------------------hvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 241 -------------------------------------------HVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred -------------------------------------------hhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 2368899999999999999999999999999999887
Q ss_pred CCCC
Q 001034 1178 EPIS 1181 (1182)
Q Consensus 1178 eP~~ 1181 (1182)
+|++
T Consensus 278 ~~~s 281 (864)
T KOG4717|consen 278 RGLS 281 (864)
T ss_pred CCcc
Confidence 7764
No 110
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.7e-37 Score=330.43 Aligned_cols=279 Identities=26% Similarity=0.399 Sum_probs=213.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.+|.+.+.||.|+||.||+|.+..++..||+|++.... .......+|+.+++.+.|+ ||+++++++......
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~------ni~~~~~~~~~~~~~ 78 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHA------NIVLLHDIIHTKETL 78 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCC------CEeEEEEEEecCCeE
Confidence 67999999999999999999999999999999997543 2223566788888888654 899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||||+.++++.++..... .++...++.++.||+.||.|||+.||+|+||||+|||++. ++.++|+|||++.
T Consensus 79 ~lv~e~~~~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~Dfg~~~ 151 (291)
T cd07870 79 TFVFEYMHTDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISY--LGELKLADFGLAR 151 (291)
T ss_pred EEEEecccCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcC--CCcEEEecccccc
Confidence 99999999998887754321 2677888999999999999999999999999999999984 6789999999986
Q ss_pred ccCC---CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETD---HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDS-PATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~---~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d-~~elLakIv~ilGp~PeemL~~ 1101 (1182)
.... ......+++.|+|||++.+. .++.++|||||||++|+|++|..||...+ ..+.+.++...++.++..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence 5332 22334578899999998764 58899999999999999999999997643 4566667766677555444332
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccc-cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKK-TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~-~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
......+.. .... ...+.. ....... ..+..+.+||.+||..||.+|||+.++|.||||
T Consensus 232 ~~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~-~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 232 VSKLPNYKP-EWFL-----------PCKPQQLRVVWKRL-SRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhcccccc-hhcc-----------ccCCcchhhhcccc-CCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 221111100 0000 000000 0000011 125789999999999999999999999999998
No 111
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.4e-38 Score=334.99 Aligned_cols=250 Identities=23% Similarity=0.299 Sum_probs=196.4
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||.|+||+||++.++.+++.||+|++.+.. .....+..|+.+++.+.| ++|++++++|....++|+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~------~~i~~~~~~~~~~~~~~lv~e~ 74 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS------RFIVSLAYAFQTKTDLCLVMTI 74 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC------CcEeeeeEEEcCCCeEEEEEeC
Confidence 699999999999999999999999997543 223455678888888855 4899999999999999999999
Q ss_pred cccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+.++ |..++..... ....+++..+..++.||+.||.|||+++|+||||||+|||++. ++.++|+|||++......
T Consensus 75 ~~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 75 MNGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDN--DGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEeeCccceecCCC
Confidence 9864 5444432211 1123889999999999999999999999999999999999984 677999999998654322
Q ss_pred ---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchh
Q 001034 1032 ---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKY 1108 (1182)
Q Consensus 1032 ---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~ 1108 (1182)
.....+|+.|+|||++.+..++.++|+|||||++|+|++|+.||...........+....
T Consensus 151 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~----------------- 213 (280)
T cd05608 151 QSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRI----------------- 213 (280)
T ss_pred CccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhh-----------------
Confidence 234578999999999999999999999999999999999999997643221111110000
Q ss_pred hcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1109 FTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1109 F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
... .......++..+.+||.+||+.||.+|| ++.++++||||+..
T Consensus 214 --------------------~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 214 --------------------LND---SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred --------------------ccc---CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 000 0001124578899999999999999999 89999999999873
No 112
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=4.8e-38 Score=352.47 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=205.3
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|++.+.||.|+||.||+|+++.+++.||+|++.+.. .....+..|+.+++.+. ||||+++++.|...
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~------hp~iv~~~~~~~~~ 115 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN------SPWVVQLFYAFQDD 115 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCCeEEEEEEcC
Confidence 478999999999999999999999999999999997532 22234556777777765 45999999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++|+||||++| +|..++... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~--~~~ikL~Df 186 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK--SGHLKLADF 186 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECC--CCCEEEEeC
Confidence 999999999985 566666432 2788889999999999999999999999999999999984 778999999
Q ss_pred CCccccCCC----cccccCCCcccchhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1023 GSSCFETDH----LCSYVQSRSYRAPEVILGLS----YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1023 GLA~~~~~~----~ss~vGTp~YmAPEVLlg~~----yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|++...... ....+||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+....+.+|+.....+
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (371)
T cd05622 187 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 266 (371)
T ss_pred CceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcc
Confidence 998754322 23567999999999997643 7899999999999999999999999988877777764211100
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK--RPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek--RPTAeELLqHPW 1172 (1182)
.+| ....++..+++||.+||..+|.+ |+++.++++|||
T Consensus 267 ---------------------------------~~~-------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 267 ---------------------------------TFP-------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ---------------------------------cCC-------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 001 11245789999999999844433 789999999999
Q ss_pred CCCC
Q 001034 1173 LSHP 1176 (1182)
Q Consensus 1173 Fk~~ 1176 (1182)
|++.
T Consensus 307 ~~~~ 310 (371)
T cd05622 307 FKND 310 (371)
T ss_pred cCCC
Confidence 9763
No 113
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-40 Score=358.42 Aligned_cols=256 Identities=25% Similarity=0.377 Sum_probs=221.5
Q ss_pred CceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 864 NSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 864 g~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
..+..++|..+++||+|.||+|.+|+.+.+++.||||++++. ++...+.+.|-++|+.++|+ ++..|.++
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HP------FLt~LKYs 236 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHP------FLTSLKYS 236 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCc------HHHHhhhh
Confidence 345678899999999999999999999999999999999875 45567788888898887655 99999999
Q ss_pred EEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 940 FYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
|+...++|+||||..|+-+-++..+.. .|++..++++-.+|+.||.|||+.+||+||||.+|+|+| ++|+|||
T Consensus 237 FQt~drlCFVMeyanGGeLf~HLsrer-----~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD--kDGHIKi 309 (516)
T KOG0690|consen 237 FQTQDRLCFVMEYANGGELFFHLSRER-----VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD--KDGHIKI 309 (516)
T ss_pred hccCceEEEEEEEccCceEeeehhhhh-----cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec--cCCceEe
Confidence 999999999999999764444333321 399999999999999999999999999999999999999 5889999
Q ss_pred ecCCCccc---cCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1020 IDLGSSCF---ETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1020 iDFGLA~~---~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
+|||+++- ......++||||.|+|||++....|+.++|||.+||+||||+||+.||++.+...++..|+-.--
T Consensus 310 tDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~---- 385 (516)
T KOG0690|consen 310 TDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL---- 385 (516)
T ss_pred eecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc----
Confidence 99999973 44567789999999999999999999999999999999999999999999998888888751111
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHP 1171 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHP 1171 (1182)
.+| ...+++++.||..+|..||.+|+ .|.|+.+|+
T Consensus 386 -------------------------------kFP---------r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 386 -------------------------------KFP---------RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred -------------------------------cCC---------ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 111 24478999999999999999996 489999999
Q ss_pred CCCCC
Q 001034 1172 WLSHP 1176 (1182)
Q Consensus 1172 WFk~~ 1176 (1182)
||...
T Consensus 426 FF~~v 430 (516)
T KOG0690|consen 426 FFASV 430 (516)
T ss_pred hhccC
Confidence 99764
No 114
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.3e-37 Score=328.09 Aligned_cols=278 Identities=29% Similarity=0.485 Sum_probs=218.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
+|++.+.||.|++|.||+|++..++..||||+++... .....+..|+.+++.+.|+ ||++++++|....++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~------~i~~~~~~~~~~~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHE------NIVRLHDVIHTENKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCC------CEeeeeeeEeeCCcEE
Confidence 4899999999999999999999999999999997643 2235567788999888644 8999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|||||+.++|..++..... ...+++..+..++.||+.||.|||+.|++||||||+||+++. ++.++|+|||++..
T Consensus 75 lv~e~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~--~~~~~l~d~g~~~~ 149 (284)
T cd07836 75 LVFEYMDKDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINK--RGELKLADFGLARA 149 (284)
T ss_pred EEEecCCccHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCcEEEeecchhhh
Confidence 9999999998888765432 224899999999999999999999999999999999999984 67899999999865
Q ss_pred cCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1028 ETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1028 ~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
.... .....+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+..+.+.++......+....+....
T Consensus 150 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 150 FGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred hcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 4322 2234568899999998764 57899999999999999999999999988888888887666554443332211
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
....+ ... .............+..+..+++||.+||+.||.+||++.++|+||||
T Consensus 230 ~~~~~-~~~--------------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 230 QLPEY-KPT--------------FPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred cCchh-ccc--------------ccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 11000 000 00000001111223447889999999999999999999999999998
No 115
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8.7e-38 Score=342.71 Aligned_cols=256 Identities=18% Similarity=0.268 Sum_probs=203.7
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||+|+||.||+++.+.+++.||+|++.+.. .....+..|+.++..+. |++|+++++.|....
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~ 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD------NQWITTLHYAFQDEN 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCC------CCCEeeEEEEEecCC
Confidence 46999999999999999999999999999999997532 12233455666666553 559999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|+||||+. |+|.+++..... .+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||
T Consensus 75 ~~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~--~~~~~kL~DfG 147 (332)
T cd05623 75 NLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD--MNGHIRLADFG 147 (332)
T ss_pred EEEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC--CCCCEEEeecc
Confidence 9999999997 567777764322 288889999999999999999999999999999999998 46789999999
Q ss_pred CccccCCC----cccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1024 SSCFETDH----LCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1024 LA~~~~~~----~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
++...... ....+||+.|+|||++. ...++.++|||||||++|+|++|+.||...+..+.+.+++.....
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~- 226 (332)
T cd05623 148 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER- 226 (332)
T ss_pred hheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc-
Confidence 98643221 22357899999999986 346889999999999999999999999988887777766421100
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK--RPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek--RPTAeELLqHPW 1172 (1182)
...| .....++..+++||++||+.+|.. |+++.++++|||
T Consensus 227 --------------------------------~~~p------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~ 268 (332)
T cd05623 227 --------------------------------FQFP------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF 268 (332)
T ss_pred --------------------------------ccCC------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence 0011 111345789999999999765544 789999999999
Q ss_pred CCCC
Q 001034 1173 LSHP 1176 (1182)
Q Consensus 1173 Fk~~ 1176 (1182)
|+..
T Consensus 269 f~~~ 272 (332)
T cd05623 269 FTGI 272 (332)
T ss_pred cCCC
Confidence 9863
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3e-38 Score=349.12 Aligned_cols=254 Identities=24% Similarity=0.307 Sum_probs=199.0
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
...|++++.||.|+||.||+|.+..+++.||||++.... .....+.+|+.+++.+.| +||++++++|.....
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH------PNVVKCHDMFDHNGE 146 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC------CCcceeeeEeccCCe
Confidence 356788899999999999999999999999999996542 334567789999988865 489999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||+.++.+... ....+..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 147 ~~lv~e~~~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~--~~~~kL~DfG~~ 215 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT---------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS--AKNVKIADFGVS 215 (353)
T ss_pred EEEEEecCCCCccccc---------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEcccccc
Confidence 9999999997543211 12566778889999999999999999999999999999984 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILG-----LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg-----~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
...... ....+||..|+|||++.. ...+.++|||||||++|+|++|+.||......+....+....
T Consensus 216 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~------ 289 (353)
T PLN00034 216 RILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC------ 289 (353)
T ss_pred eecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh------
Confidence 764432 235678999999999843 234578999999999999999999997432211111110000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.. ........++..+++||.+||..||.+|||+.|||+||||....
T Consensus 290 -----------------------------~~-----~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 290 -----------------------------MS-----QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred -----------------------------cc-----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 00 00011234578899999999999999999999999999998874
Q ss_pred C
Q 001034 1178 E 1178 (1182)
Q Consensus 1178 e 1178 (1182)
.
T Consensus 336 ~ 336 (353)
T PLN00034 336 P 336 (353)
T ss_pred c
Confidence 3
No 117
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.7e-38 Score=345.30 Aligned_cols=244 Identities=25% Similarity=0.367 Sum_probs=201.2
Q ss_pred EEeccCCceEEEEEEE---CCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 875 EYLGSAAFSKAIQAHD---LHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkD---k~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
+.||+|+||.||++++ ..+++.||+|++.+.. ........|+.+++.+.| |||++++++|.....+|+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~~~~~~l 75 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH------PFIVKLHYAFQTEGKLYL 75 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC------CCcccEEEEEEcCCEEEE
Confidence 5799999999999986 3678999999998643 123345678888888754 599999999999999999
Q ss_pred EEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+. ++|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kL~Dfg~~~~ 147 (318)
T cd05582 76 ILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDE--EGHIKLTDFGLSKE 147 (318)
T ss_pred EEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECC--CCcEEEeeccCCcc
Confidence 999998 46776664322 3889999999999999999999999999999999999984 67899999999875
Q ss_pred cCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1028 ETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1028 ~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
.... ....+|++.|+|||++.+..++.++|||||||++|+|++|+.||...+....+..+......
T Consensus 148 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~----------- 216 (318)
T cd05582 148 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLG----------- 216 (318)
T ss_pred cCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCC-----------
Confidence 4322 34567899999999999999999999999999999999999999988777666655311100
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
+ ....+..+.+||++||+.||.+||+ +.+++.||||+..
T Consensus 217 ------------------------~---------p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 217 ------------------------M---------PQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ------------------------C---------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 0 1124678999999999999999999 7789999999753
No 118
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.9e-38 Score=345.31 Aligned_cols=245 Identities=22% Similarity=0.333 Sum_probs=194.3
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||.||+|++..+++.||+|++++.. .....+..|+.++..+. .||||++++++|.....+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-----CCCcCCceeeEEEeCCEEEEEE
Confidence 36899999999999999999999999998642 23344566777776653 3569999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~--~~~~kL~DfG~~~~~~ 147 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDS--EGHIKLTDYGMCKEGL 147 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECC--CCCEEEeeCCcccccc
Confidence 99996 4555544322 2889999999999999999999999999999999999984 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HH-HHHHHHhhcCCcchh
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP--------AT-LLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~--------~e-lLakIv~ilGp~Pee 1097 (1182)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||..... .. ....+.
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~--------- 218 (329)
T cd05618 148 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL--------- 218 (329)
T ss_pred CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHh---------
Confidence 2223456789999999999999999999999999999999999999953110 00 000000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC------HHHHHcCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS------ASDALKHP 1171 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT------AeELLqHP 1171 (1182)
... .......+..+.+||.+||+.||.+||+ +.++++||
T Consensus 219 --------------------------------~~~---~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp 263 (329)
T cd05618 219 --------------------------------EKQ---IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 263 (329)
T ss_pred --------------------------------cCC---CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCC
Confidence 000 0011245788999999999999999998 57999999
Q ss_pred CCCCC
Q 001034 1172 WLSHP 1176 (1182)
Q Consensus 1172 WFk~~ 1176 (1182)
||+..
T Consensus 264 ~f~~~ 268 (329)
T cd05618 264 FFRNV 268 (329)
T ss_pred CCCCC
Confidence 99763
No 119
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=8e-38 Score=342.83 Aligned_cols=246 Identities=23% Similarity=0.332 Sum_probs=196.2
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||+|+||+||+|++..+++.||+|++++.. .....+..|+.++..+.+ |++|++++++|....++|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----~~~i~~~~~~~~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASS-----NPFLVGLHSCFQTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcC-----CCCEeeEEEEEEeCCEEEEEE
Confidence 36999999999999999999999999998643 233456677787777643 459999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc-
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE- 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~- 1028 (1182)
||+.+ +|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~--~~~~kl~Dfg~~~~~~ 147 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDA--DGHIKLTDYGMCKEGL 147 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeC--CCCEEEeccccceecc
Confidence 99986 5655554332 2899999999999999999999999999999999999984 678999999998642
Q ss_pred --CCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhhcCCcchhhhh
Q 001034 1029 --TDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP------ATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1029 --~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~------~elLakIv~ilGp~PeemL~ 1100 (1182)
.......+||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ...+.+++
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~------------ 215 (327)
T cd05617 148 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI------------ 215 (327)
T ss_pred CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH------------
Confidence 2233456899999999999999999999999999999999999999953211 11111110
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC------HHHHHcCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS------ASDALKHPWLS 1174 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT------AeELLqHPWFk 1174 (1182)
.. .+ .......+..+.+||.+||..||.+|++ +.++++||||+
T Consensus 216 ------------------------~~--~~-----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~ 264 (327)
T cd05617 216 ------------------------LE--KP-----IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR 264 (327)
T ss_pred ------------------------Hh--CC-----CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence 00 00 0011234688999999999999999998 57999999997
Q ss_pred CC
Q 001034 1175 HP 1176 (1182)
Q Consensus 1175 ~~ 1176 (1182)
..
T Consensus 265 ~~ 266 (327)
T cd05617 265 SI 266 (327)
T ss_pred CC
Confidence 64
No 120
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.6e-37 Score=327.48 Aligned_cols=278 Identities=29% Similarity=0.517 Sum_probs=220.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|+++.. ......+..|+.+++.+.|. ||++++++|.....
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~ 74 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE------NIVNLKEAFRRKGR 74 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCC------CeeehhheEEECCE
Confidence 4799999999999999999999999999999998753 23346778899999988654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||+.++++..+..... .+++..+..++.||+.||.|||+.+++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~iv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~--~~~~kl~d~g~~ 147 (288)
T cd07833 75 LYLVFEYVERTLLELLEASPG-----GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE--SGVLKLCDFGFA 147 (288)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCEEEEeeecc
Confidence 999999999988776654322 2788999999999999999999999999999999999994 778999999998
Q ss_pred cccCCC----cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDH----LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~----~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
...... .....++..|+|||++.+. .++.++|+||||+++|+|++|++||...+..+.+..+...++..+..+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 148 RALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred cccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 764432 2345678899999999888 88999999999999999999999999888877777777777766554332
Q ss_pred cccccchhhcccchhhhhhcchhhhhhcccc-ccccccCCC-CCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPK-KTSLRHRLP-MGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk-~~sL~~~l~-~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.......+ .......+. ........+ .++..+++||++||..+|.+|||+.++++||||
T Consensus 228 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 228 LFSSNPRF--------------AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred hcccCccc--------------cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 21110000 000000000 001111122 347899999999999999999999999999998
No 121
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9.6e-38 Score=341.81 Aligned_cols=285 Identities=31% Similarity=0.551 Sum_probs=219.8
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
+.++|++.+.||.|+||.||+|.+..+++.||||++... .........|+.+++.++|+ ||+++++++...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~ 76 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHE------NIIGILDIIRPPS 76 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCC------CcCchhheeeccc
Confidence 457899999999999999999999999999999998642 23445677889999988754 899999876654
Q ss_pred ----CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 944 ----EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 944 ----e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
.++|+||||+.+++...+... .+++..++.++.||+.||.|||+.||+||||||+|||++. .+.+||
T Consensus 77 ~~~~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~--~~~~kl 147 (336)
T cd07849 77 FESFNDVYIVQELMETDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT--NCDLKI 147 (336)
T ss_pred ccccceEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC--CCCEEE
Confidence 468999999999888776532 2888999999999999999999999999999999999984 678999
Q ss_pred ecCCCccccCCC------cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1020 IDLGSSCFETDH------LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1020 iDFGLA~~~~~~------~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
+|||++...... ....++++.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+...++
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~ 227 (336)
T cd07849 148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG 227 (336)
T ss_pred CcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 999998654321 123467899999998765 4689999999999999999999999998888888888877777
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
.++...+........ ..+.. . ........+....+..+..+.+||.+||+.+|.+|||+.++|+|||
T Consensus 228 ~~~~~~~~~~~~~~~------~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~ 294 (336)
T cd07849 228 TPSQEDLNCIISLRA------RNYIK-----S--LPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294 (336)
T ss_pred CCCHHHHHHhhchhh------hhHHh-----h--cCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 654433221110000 00000 0 0000001111123445788999999999999999999999999999
Q ss_pred CCCCCCC
Q 001034 1173 LSHPYEP 1179 (1182)
Q Consensus 1173 Fk~~~eP 1179 (1182)
|+....|
T Consensus 295 ~~~~~~~ 301 (336)
T cd07849 295 LEQYHDP 301 (336)
T ss_pred ccccCCC
Confidence 9877654
No 122
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=9.5e-38 Score=342.79 Aligned_cols=256 Identities=18% Similarity=0.259 Sum_probs=204.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++++.||+|+||.||+++++.+++.||+|++.+.. .....+..|+.++..+. |++|++++++|....
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~l~~~~~~~~ 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGD------CQWITTLHYAFQDEN 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEcCC
Confidence 47999999999999999999999999999999997532 12233556666666654 459999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++||||||+.| +|..++..... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~--~~~~kl~DfG 147 (331)
T cd05624 75 YLYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM--NGHIRLADFG 147 (331)
T ss_pred EEEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC--CCCEEEEecc
Confidence 99999999985 67777654321 2788999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCC----cccccCCCcccchhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1024 SSCFETDH----LCSYVQSRSYRAPEVILG-----LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1024 LA~~~~~~----~ss~vGTp~YmAPEVLlg-----~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
++...... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.+.+++.....+
T Consensus 148 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~ 227 (331)
T cd05624 148 SCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERF 227 (331)
T ss_pred ceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcc
Confidence 98654332 123578999999999976 468899999999999999999999999888777666664211000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC--CCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK--RPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek--RPTAeELLqHPW 1172 (1182)
..| .....++..+++||.+||+..+.+ |+++.++++|||
T Consensus 228 ---------------------------------~~p------~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~ 268 (331)
T cd05624 228 ---------------------------------QFP------SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF 268 (331)
T ss_pred ---------------------------------cCC------CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence 001 112235789999999999976654 579999999999
Q ss_pred CCCC
Q 001034 1173 LSHP 1176 (1182)
Q Consensus 1173 Fk~~ 1176 (1182)
|...
T Consensus 269 f~~~ 272 (331)
T cd05624 269 FEGI 272 (331)
T ss_pred cCCC
Confidence 9763
No 123
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-37 Score=331.14 Aligned_cols=278 Identities=27% Similarity=0.419 Sum_probs=219.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-- 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~-- 943 (1182)
+.|++.+.||.|+||.||+|.+..+++.+|+|.++... .....+.+|+.+++.+.| |||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~~~~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH------PNIVTVKEVVVGSNL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC------CCEEEEEEEEEecCC
Confidence 46899999999999999999999999999999997543 222345678888888864 4899999999887
Q ss_pred CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 944 EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 944 e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..+||||||+.++|.+++..... .+++..++.++.||+.||.|||+.+++|+||||+|||++. ++.++|+|||
T Consensus 79 ~~~~lv~e~~~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~--~~~~~l~d~g 151 (293)
T cd07843 79 DKIYMVMEYVEHDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN--RGILKICDFG 151 (293)
T ss_pred CcEEEEehhcCcCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECC--CCcEEEeecC
Confidence 89999999999988888765432 3899999999999999999999999999999999999994 6789999999
Q ss_pred CccccCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1024 SSCFETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1024 LA~~~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
++...... .....+++.|+|||++.+. .++.++|+|||||++|+|++|.+||........+.+++..++.+....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 152 LAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred ceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 98754432 2334678889999998765 4689999999999999999999999999988889988887776655443
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCC--CcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPM--GDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~--~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
........... .....+....+...++. ++..+.+||++||+.+|++|||+.|+|.||||
T Consensus 232 ~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 232 PGFSELPGAKK--------------KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHhhccchhcc--------------cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 32211100000 00000111111222333 47889999999999999999999999999998
No 124
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3.9e-38 Score=343.94 Aligned_cols=243 Identities=26% Similarity=0.387 Sum_probs=196.4
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHH-HHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKL-LKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikI-Lr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||+|+||+||+|+++.+|+.||||++.+.. .....+..|..+ ++.+ .||||++++++|.....+|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~------~hp~iv~~~~~~~~~~~~~lv 74 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV------KHPFLVGLHYSFQTTEKLYFV 74 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC------CCCCCccEEEEEecCCEEEEE
Confidence 36899999999999999999999999997642 122233344433 3333 466999999999999999999
Q ss_pred EEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~--~~~~kL~DfG~~~~~ 146 (325)
T cd05604 75 LDFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (325)
T ss_pred EcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEEeecCCcccC
Confidence 999986 4555554322 2889999999999999999999999999999999999984 678999999998642
Q ss_pred C---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 T---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+..+++..++...
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~-------------- 212 (325)
T cd05604 147 IAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP-------------- 212 (325)
T ss_pred CCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--------------
Confidence 2 22345678999999999999999999999999999999999999999887776665553100
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH----HHHHcCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA----SDALKHPWLSH 1175 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA----eELLqHPWFk~ 1175 (1182)
....+..+..+.+||++||+.+|.+||++ .++++||||+.
T Consensus 213 ------------------------------~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 213 ------------------------------LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred ------------------------------ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 00112356789999999999999999987 59999999986
No 125
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.3e-37 Score=330.45 Aligned_cols=250 Identities=25% Similarity=0.452 Sum_probs=212.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||.|+||.||++.+..+++.||+|++.+.. .....+..|+++++.+.| |||+++++++....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~ 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH------PFLVNLYGSFQDDS 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC------CCccceeeEEEcCC
Confidence 46999999999999999999999999999999997643 234567778888888864 48999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|.|||++. ++.+||+|||
T Consensus 75 ~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~dfg 146 (290)
T cd05580 75 NLYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS--DGYIKITDFG 146 (290)
T ss_pred eEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC--CCCEEEeeCC
Confidence 9999999995 67877776542 2889999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1024 SSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1024 LA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
++..........++++.|+|||.+.+..++.++|+||||+++|+|++|..||...+......++.....+
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------- 216 (290)
T cd05580 147 FAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVR---------- 216 (290)
T ss_pred CccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcc----------
Confidence 9987665555667899999999999888999999999999999999999999887766555555311100
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
+ ....+..+.+||.+||..||.+|+ ++.++++||||+..
T Consensus 217 -------------------------~---------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 217 -------------------------F---------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred -------------------------C---------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 0 112367899999999999999999 99999999999764
No 126
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.6e-37 Score=332.80 Aligned_cols=254 Identities=23% Similarity=0.312 Sum_probs=202.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.|++.+.||+|+||.||++.+..+++.||+|.+.... .....+..|+.+++.++|+ +|+.+++.+....+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~------~i~~~~~~~~~~~~ 74 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR------FVVSLAYAYETKDA 74 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCC------CeeeeeEEEecCCE
Confidence 3788899999999999999999999999999987542 2223456788888888654 89999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.| +|..++..... ..+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~--~~~~~l~Dfg~ 148 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDD--HGHIRISDLGL 148 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECC--CCCEEEeeccc
Confidence 9999999985 56666543321 23888999999999999999999999999999999999984 67799999999
Q ss_pred ccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1025 SCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1025 A~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
+...... .....|++.|+|||++.+..++.++|+|||||++|+|++|++||...........+......
T Consensus 149 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~--------- 219 (285)
T cd05630 149 AVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE--------- 219 (285)
T ss_pred eeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---------
Confidence 8754322 23457899999999999999999999999999999999999999764321111111000000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSH 1175 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~ 1175 (1182)
. + .......+..+.+||++||+.||.+||| +.|+++||||+.
T Consensus 220 ----------------------~----~-----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 220 ----------------------V----Q-----EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred ----------------------h----h-----hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 0 0 0011234678999999999999999999 999999999975
No 127
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-38 Score=365.81 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=202.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhH----HHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFD----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~d----q~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
.-|..++.||-|+||+|.++....|...||||.+++..-... +..+|..||... +.+|||+||.+|+++.
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA------Dn~WVVrLyySFQDkd 702 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA------DNEWVVRLYYSFQDKD 702 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc------CCcceEEEEEEeccCC
Confidence 458889999999999999999999999999999988654444 444555555554 4459999999999999
Q ss_pred eEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+|+||+|++|+ +..++.... .|.+..+++|+++|..||+++|++|+|||||||+|||||. +|+|||+|||
T Consensus 703 nLYFVMdYIPGGDmMSLLIrmg------IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDr--dGHIKLTDFG 774 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIRMG------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR--DGHIKLTDFG 774 (1034)
T ss_pred ceEEEEeccCCccHHHHHHHhc------cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEcc--CCceeeeecc
Confidence 999999999964 555555433 2999999999999999999999999999999999999995 8899999999
Q ss_pred CccccC-----------CC----------------------------------cccccCCCcccchhhhcCCCCCchhhH
Q 001034 1024 SSCFET-----------DH----------------------------------LCSYVQSRSYRAPEVILGLSYDKKIDI 1058 (1182)
Q Consensus 1024 LA~~~~-----------~~----------------------------------~ss~vGTp~YmAPEVLlg~~yS~kSDI 1058 (1182)
||+-.. ++ ..+.+||+.|+|||++....|+..|||
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 985211 00 124588999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccC
Q 001034 1059 WSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHR 1138 (1182)
Q Consensus 1059 WSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~ 1138 (1182)
||.|||||||+.|++||..+++.++..+|+.+.. ......
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~----------------------------------------~l~~~~ 894 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPGETQYKVINWRN----------------------------------------FLHIPY 894 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCCcceeeeeehhh----------------------------------------cccccc
Confidence 9999999999999999998887665555431100 001112
Q ss_pred CCCCcHHHHHHHHHhcccCCCCCC---CHHHHHcCCCCCC
Q 001034 1139 LPMGDQGFIDFVAHLLEINPKKRP---SASDALKHPWLSH 1175 (1182)
Q Consensus 1139 l~~~SeeL~DLIrkMLq~DPekRP---TAeELLqHPWFk~ 1175 (1182)
..+.+.++++||.++++ +++.|+ -+.+|-.||||+.
T Consensus 895 ~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 895 QGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred ccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccc
Confidence 34568999999998665 688886 4778999999974
No 128
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.2e-37 Score=321.09 Aligned_cols=249 Identities=26% Similarity=0.339 Sum_probs=202.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
+.|.+.+.||.|+||.||+|.+..+++.||||.+.... .....+.+|+.+++.+.| |||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH------ERIVQYYGCLRD 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC------CCeeeeEEEEcc
Confidence 46899999999999999999999999999999987542 123456678888887754 589999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
...+|+||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~--~~~~~l~d 147 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS--AGNVKLGD 147 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEee
Confidence 9999999999985 6777665432 2788889999999999999999999999999999999984 67899999
Q ss_pred CCCccccCCCc------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1022 LGSSCFETDHL------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1022 FGLA~~~~~~~------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
||++....... ....++..|+|||++.+..++.++|||||||++|+|++|+.||...+......++.....
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--- 224 (263)
T cd06625 148 FGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT--- 224 (263)
T ss_pred cccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCC---
Confidence 99986533211 234678899999999999999999999999999999999999987655444333310000
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
........+..+.+||++||..+|.+|||+.++|+||||
T Consensus 225 ---------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 225 ---------------------------------------NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred ---------------------------------------CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 001112356789999999999999999999999999998
No 129
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-39 Score=346.89 Aligned_cols=252 Identities=26% Similarity=0.447 Sum_probs=215.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---------chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---------KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---------k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
..|.-.+.||+|..+.|.+|.++.+|+.+|+|++... ....+....|+.||+++. .||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~D~ 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQDV 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEeeee
Confidence 4577778999999999999999999999999999642 133456778999999986 46799999999
Q ss_pred EEecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 940 FYYREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
|+.+..+++|+|.|+ |.|++++...- .+++...+.|++||+.+++|||..+|+||||||+|||++. +.+||
T Consensus 92 yes~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILldd--n~~i~ 163 (411)
T KOG0599|consen 92 YESDAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDD--NMNIK 163 (411)
T ss_pred ccCcchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecc--ccceE
Confidence 999999999999998 78999887543 3999999999999999999999999999999999999994 67799
Q ss_pred EecCCCccccC--CCcccccCCCcccchhhhc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 001034 1019 VIDLGSSCFET--DHLCSYVQSRSYRAPEVIL------GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGI 1090 (1182)
Q Consensus 1019 LiDFGLA~~~~--~~~ss~vGTp~YmAPEVLl------g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~i 1090 (1182)
|+|||+++.+. ......||||.|+|||.+. ..+|+..+|+|++|||||.||.|.+||......-+++.|+..
T Consensus 164 isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG 243 (411)
T KOG0599|consen 164 ISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG 243 (411)
T ss_pred EeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence 99999998754 4567889999999999985 346999999999999999999999999887777777777632
Q ss_pred cCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1091 IGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1091 lGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
... +..|. ..+.+...++||++||+.||.+|+|+.|+|+|
T Consensus 244 kyq---------------------------------F~spe-------Wadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 244 KYQ---------------------------------FRSPE-------WADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ccc---------------------------------cCCcc-------hhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 221 11222 23447789999999999999999999999999
Q ss_pred CCC
Q 001034 1171 PWL 1173 (1182)
Q Consensus 1171 PWF 1173 (1182)
|||
T Consensus 284 pff 286 (411)
T KOG0599|consen 284 PFF 286 (411)
T ss_pred hHH
Confidence 999
No 130
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=6.8e-38 Score=342.04 Aligned_cols=243 Identities=25% Similarity=0.368 Sum_probs=196.3
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHH-HHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIK-LLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~Eik-ILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||+|+||.||+|++..+++.||+|++.+... ....+..|.. +++.+ .|+||++++++|.....+|+|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~------~h~~Iv~~~~~~~~~~~~~lv 74 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV------KHPFLVGLHFSFQTADKLYFV 74 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC------CCCCCCceeEEEEcCCeEEEE
Confidence 368999999999999999999999999976431 1122333333 23333 466999999999999999999
Q ss_pred EEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+.+ +|..++.... .+.+..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~--~~~~kl~DfG~a~~~ 146 (325)
T cd05602 75 LDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS--QGHIVLTDFGLCKEN 146 (325)
T ss_pred EeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECC--CCCEEEccCCCCccc
Confidence 999996 5666554322 2788889999999999999999999999999999999984 678999999998643
Q ss_pred C---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 T---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~-------------- 212 (325)
T cd05602 147 IEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP-------------- 212 (325)
T ss_pred ccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCC--------------
Confidence 2 22345679999999999999999999999999999999999999999888777666653100
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHH----HHHcCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSAS----DALKHPWLSH 1175 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAe----ELLqHPWFk~ 1175 (1182)
....+..+..+.+||.+||+.||.+|+++. ++++|+||..
T Consensus 213 ------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 213 ------------------------------LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred ------------------------------cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 001134578899999999999999999876 8999999965
No 131
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2e-37 Score=337.95 Aligned_cols=285 Identities=28% Similarity=0.445 Sum_probs=223.2
Q ss_pred eecCCEEEE-EEeccCCceEEEEEEECCCCcEEEEEEEeccchhh---------------HHHHHHHHHHHHhcCCCCCC
Q 001034 866 VIAGRYHVT-EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFF---------------DQSLDEIKLLKYVNKHDPGD 929 (1182)
Q Consensus 866 iL~drYeIl-k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~---------------dq~l~EikILr~L~h~~~l~ 929 (1182)
.+.++|..+ +.||.|+||.||+|.+..+++.||||+++...... ..+.+|+.+++.+.|
T Consensus 5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----- 79 (335)
T PTZ00024 5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH----- 79 (335)
T ss_pred ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC-----
Confidence 356788754 77999999999999999999999999987543211 135678888888865
Q ss_pred CcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEE
Q 001034 930 KYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV 1009 (1182)
Q Consensus 930 HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILI 1009 (1182)
+||++++++|.....+|+||||+.++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+|||+
T Consensus 80 -~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill 152 (335)
T PTZ00024 80 -ENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI 152 (335)
T ss_pred -cceeeeeEEEecCCcEEEEEeccccCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE
Confidence 48999999999999999999999999988876432 28889999999999999999999999999999999999
Q ss_pred ccCCCceEEEecCCCccccC-----------------CCcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhC
Q 001034 1010 KSYSRCEVKVIDLGSSCFET-----------------DHLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTG 1071 (1182)
Q Consensus 1010 Ds~~dG~IKLiDFGLA~~~~-----------------~~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTG 1071 (1182)
+. .+.++|+|||++.... .......+++.|+|||++.+. .++.++|+|||||++|+|++|
T Consensus 153 ~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 153 NS--KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred CC--CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 84 6789999999886543 111233467889999998764 478999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHH
Q 001034 1072 NVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVA 1151 (1182)
Q Consensus 1072 r~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIr 1151 (1182)
.+||.+.+....+..++..++.++...+........+. ...... ........+..+..+.+||.
T Consensus 231 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~~~~~~~~~~~~~~li~ 294 (335)
T PTZ00024 231 KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYT--------------EFTPRK--PKDLKTIFPNASDDAIDLLQ 294 (335)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhccccc--------------ccCcCC--cccHHHhCcCCChHHHHHHH
Confidence 99999999888888888877766544332221111000 000000 01111223455788999999
Q ss_pred HhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1152 HLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1152 kMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
+||+.+|.+|||+.++|.||||+...-|+
T Consensus 295 ~~l~~~P~~R~s~~~~l~~~~~~~~~~~~ 323 (335)
T PTZ00024 295 SLLKLNPLERISAKEALKHEYFKSDPLPC 323 (335)
T ss_pred HHcCCCchhccCHHHHhcCcccCCCCCCC
Confidence 99999999999999999999999876554
No 132
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.1e-37 Score=327.11 Aligned_cols=276 Identities=29% Similarity=0.456 Sum_probs=218.2
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
|++.+.||.|++|.||+|.++.+|..||+|++.... .....+.+|+.+++.++| ++|+++++++......|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~iv~~~~~~~~~~~~~ 74 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH------PNIVRLLDVVHSENKLY 74 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC------CCccCHhheeccCCeEE
Confidence 678899999999999999999999999999997543 223456789999988864 48999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+||||+.++|..++..... ..+++..+..++.||+.||.|||+.+++|+||+|+|||++. ++.++|+|||++..
T Consensus 75 iv~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~--~~~~~l~df~~~~~ 148 (283)
T cd07835 75 LVFEFLDLDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDR--EGALKLADFGLARA 148 (283)
T ss_pred EEEeccCcCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcC--CCcEEEeecccccc
Confidence 9999999888888765432 23889999999999999999999999999999999999995 77899999999865
Q ss_pred cCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1028 ETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1028 ~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
.... .....+++.|+|||++.+. .++.++|+|||||++|+|++|++||...+....+.+++..++.+...++....
T Consensus 149 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07835 149 FGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVT 228 (283)
T ss_pred cCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhh
Confidence 4322 1233568889999988764 57899999999999999999999999888888777887776665544432221
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
....+.. ..............+..+..+.+||.+||+.+|.+|||+.++|+||||
T Consensus 229 ~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 229 SLPDYKP---------------TFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred hchhhhh---------------hcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 1111000 000000111122345567899999999999999999999999999998
No 133
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.6e-37 Score=340.84 Aligned_cols=284 Identities=28% Similarity=0.493 Sum_probs=222.4
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+..+|.+.+.||.|+||.||+|++..+++.||||.+... .........|+.+++.+.|+ ||+++++++...
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------ni~~~~~~~~~~ 76 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHE------NVIAIKDIMPPP 76 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCC------CccchHHheecc
Confidence 356899999999999999999999999999999998753 22334566788888887654 899999988654
Q ss_pred -----CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 944 -----EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 944 -----e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
.++|+||||+.++|..++.... .+++..+..++.||+.||.|||+.+++||||||+|||++. ++.+|
T Consensus 77 ~~~~~~~~~lv~e~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~--~~~~k 148 (337)
T cd07858 77 HREAFNDVYIVYELMDTDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA--NCDLK 148 (337)
T ss_pred cccccCcEEEEEeCCCCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEE
Confidence 3589999999999888876432 2889999999999999999999999999999999999985 67899
Q ss_pred EecCCCccccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1019 VIDLGSSCFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1019 LiDFGLA~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|+|||++...... .....++..|+|||++.. ..++.++|||||||++|+|++|++||.+.+....+..+...++.+
T Consensus 149 L~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (337)
T cd07858 149 ICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSP 228 (337)
T ss_pred ECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCC
Confidence 9999998754332 234567889999999875 468999999999999999999999999988888888888888766
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
+...+..... ... .......+. ........+..+..+++||++||+++|++|||+.+||+|||
T Consensus 229 ~~~~~~~~~~--------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~ 293 (337)
T cd07858 229 SEEDLGFIRN--------EKA-------RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY 293 (337)
T ss_pred ChHHhhhcCc--------hhh-------hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence 5443311000 000 000000010 01111223456889999999999999999999999999999
Q ss_pred CCCCCCC
Q 001034 1173 LSHPYEP 1179 (1182)
Q Consensus 1173 Fk~~~eP 1179 (1182)
|.....|
T Consensus 294 ~~~~~~~ 300 (337)
T cd07858 294 LASLHDP 300 (337)
T ss_pred hhhhcCc
Confidence 9876544
No 134
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.9e-38 Score=340.02 Aligned_cols=243 Identities=25% Similarity=0.367 Sum_probs=194.7
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHH-HHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIK-LLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~Eik-ILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||.|+||.||+|++..+++.||+|++.+... ....+..|.. +++.+ .||||++++++|.....+|+|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~------~h~~iv~~~~~~~~~~~~~lv 74 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL------KHPFLVGLHYSFQTAEKLYFV 74 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC------CCCCccceeeEEEcCCEEEEE
Confidence 368999999999999999999999999976431 1223334433 34444 456999999999999999999
Q ss_pred EEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+.+ +|...+.... .+++..++.++.||+.||.|||++||+||||||+||||+. ++.+||+|||++...
T Consensus 75 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~--~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 75 LDYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS--QGHVVLTDFGLCKEG 146 (321)
T ss_pred EcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC--CCCEEEccCCCCccC
Confidence 999986 4555444321 2788899999999999999999999999999999999984 678999999998643
Q ss_pred C---CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 T---DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~---~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+...++..+.....
T Consensus 147 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~------------- 213 (321)
T cd05603 147 VEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPL------------- 213 (321)
T ss_pred CCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCC-------------
Confidence 2 223345789999999999999999999999999999999999999998877666555531000
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH----HHHHcCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA----SDALKHPWLSH 1175 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA----eELLqHPWFk~ 1175 (1182)
...+..+..+.+||.+||+.||.+||++ .++++||||..
T Consensus 214 -------------------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~ 256 (321)
T cd05603 214 -------------------------------QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSP 256 (321)
T ss_pred -------------------------------CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCC
Confidence 0112346789999999999999999876 59999999964
No 135
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.1e-37 Score=338.25 Aligned_cols=283 Identities=34% Similarity=0.501 Sum_probs=227.3
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC--
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE-- 944 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e-- 944 (1182)
+|++.+.||.|+||.||+|++..+++.||||++.... .....+..|+.+++.++| +||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH------ENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC------cchhhhhhhhcccCcc
Confidence 6899999999999999999999999999999987642 334567788899888864 48999999998875
Q ss_pred ---eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 945 ---HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 945 ---~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
.+|+||+|+.++|..++.... .+++..++.++.||+.||.|||+.||+|+||||.|||++. ++.++|+|
T Consensus 75 ~~~~~~lv~e~~~~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~--~~~~~L~d 146 (330)
T cd07834 75 DFNDVYIVTELMETDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNS--NCDLKICD 146 (330)
T ss_pred cccceEEEecchhhhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEcc
Confidence 899999999988887775432 3889999999999999999999999999999999999995 57899999
Q ss_pred CCCccccCCC------cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1022 LGSSCFETDH------LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1022 FGLA~~~~~~------~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
||++...... .....+++.|+|||++.+. .++.++|+|||||++|+|++|++||.+.+..+.+..++..++.+
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~ 226 (330)
T cd07834 147 FGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTP 226 (330)
T ss_pred cCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCC
Confidence 9998764433 2345678899999999888 89999999999999999999999999999999999999888877
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
+...+....... ...+... ........+....+..+..+.+||.+||+++|.+|||+.++|+||||+
T Consensus 227 ~~~~~~~~~~~~------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~ 293 (330)
T cd07834 227 SEEDLKFITSEK------ARNYLKS-------LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLA 293 (330)
T ss_pred ChhHhhhccccc------hhhHHhh-------cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHH
Confidence 655443211000 0000000 000011122223445688999999999999999999999999999998
Q ss_pred CCCCC
Q 001034 1175 HPYEP 1179 (1182)
Q Consensus 1175 ~~~eP 1179 (1182)
....|
T Consensus 294 ~~~~~ 298 (330)
T cd07834 294 QLHDP 298 (330)
T ss_pred hhccc
Confidence 77655
No 136
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-39 Score=351.74 Aligned_cols=246 Identities=26% Similarity=0.395 Sum_probs=209.6
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE-EEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD-YFY 941 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d-sFq 941 (1182)
.....|+|+++||+|.||+||+|+++.+|..+|.|.+.-. ....+....|+.+|++|+|+ |||++++ .|.
T Consensus 16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~Hp------NIVqYy~~~f~ 89 (375)
T KOG0591|consen 16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHP------NIVQYYAHSFI 89 (375)
T ss_pred ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCc------hHHHHHHHhhh
Confidence 3446799999999999999999999999999999998743 34456788999999999766 8999998 666
Q ss_pred ecCe-EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh--cC--ccccccCCccEEEccCCCc
Q 001034 942 YREH-LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG--LG--LIHCDLKPENILVKSYSRC 1015 (1182)
Q Consensus 942 d~e~-LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS--~G--IIHRDIKPeNILIDs~~dG 1015 (1182)
.... ++||||++. |+|...++..+.. ...+++..++.++.|++.||..+|+ .. |+||||||.||+|+ .+|
T Consensus 90 ~~~evlnivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~--~~g 165 (375)
T KOG0591|consen 90 EDNEVLNIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT--ANG 165 (375)
T ss_pred ccchhhHHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc--CCC
Confidence 6555 999999999 5777777766543 3359999999999999999999998 45 99999999999999 478
Q ss_pred eEEEecCCCccccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1016 EVKVIDLGSSCFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1016 ~IKLiDFGLA~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
.+||.|||++++.... ..+++|||.||+||++...+|+.++|||||||++|||+.-.+||.+.+-.+++.+|-+.--
T Consensus 166 vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 166 VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence 8999999999987654 3578999999999999999999999999999999999999999999999999888853211
Q ss_pred C-cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 001034 1093 P-IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA 1164 (1182)
Q Consensus 1093 p-~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA 1164 (1182)
+ +|. ..+|..+..||..|+..||+.||+.
T Consensus 246 ~~~p~-------------------------------------------~~YS~~l~~li~~ci~vd~~~RP~t 275 (375)
T KOG0591|consen 246 PPLPD-------------------------------------------EHYSTDLRELINMCIAVDPEQRPDT 275 (375)
T ss_pred CCCcH-------------------------------------------HHhhhHHHHHHHHHccCCcccCCCc
Confidence 1 111 1347889999999999999999984
No 137
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.1e-37 Score=340.94 Aligned_cols=284 Identities=26% Similarity=0.499 Sum_probs=224.4
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe--
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY-- 942 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd-- 942 (1182)
.++|++.+.||.|+||.||+|.++.+++.||+|++.... ........|+.+++.+.| +||++++++|..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~ 77 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH------DNIIAIRDILRPPG 77 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC------CCccCHHHhccccC
Confidence 478999999999999999999999999999999987542 234556678888888864 489999988864
Q ss_pred --cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 943 --REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 943 --~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
...+|+||||+.++|..++.... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+||+
T Consensus 78 ~~~~~~~lv~e~~~~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~--~~~~kl~ 149 (334)
T cd07855 78 ADFKDVYVVMDLMESDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE--DCELRIG 149 (334)
T ss_pred CCCceEEEEEehhhhhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEec
Confidence 35789999999988887765432 2889999999999999999999999999999999999994 7789999
Q ss_pred cCCCccccCCC-------cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETDH-------LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~~-------~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++...... ....+++..|+|||++.+ ..++.++|||||||++|+|++|++||...+....+..+...+|
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g 229 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC
Confidence 99998653221 123478899999999866 4688999999999999999999999999988888888888888
Q ss_pred Ccchhhhhcccccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.++..++....... ........+. ...+....+..+..+.+||.+||+++|.+|||+.++|.|
T Consensus 230 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 230 SPSEEVLNRIGSDR---------------VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred CChhHhhhhhchhh---------------HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 77766544321100 0000000010 011112234568899999999999999999999999999
Q ss_pred CCCCCCCCCC
Q 001034 1171 PWLSHPYEPI 1180 (1182)
Q Consensus 1171 PWFk~~~eP~ 1180 (1182)
|||.....|.
T Consensus 295 ~~~~~~~~~~ 304 (334)
T cd07855 295 PFLAQYHDPD 304 (334)
T ss_pred hhhhhccCCc
Confidence 9998766554
No 138
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-37 Score=359.05 Aligned_cols=281 Identities=21% Similarity=0.299 Sum_probs=208.0
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
....|.+.+.||+|+||.||+|.+..+++.||||... .....+|+.+|++++|+ |||++++++......
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-----~~~~~~E~~iL~~L~Hp------nIv~l~~~~~~~~~~ 235 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-----YASSVHEARLLRRLSHP------AVLALLDVRVVGGLT 235 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-----ccCHHHHHHHHHHCCCC------CCCcEEEEEEECCEE
Confidence 3468999999999999999999999999999999643 23456899999998654 899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+||+++.++|+.++..... .+++..++.|+.||+.||.|||++|||||||||+||||+. .+.+||+|||+++
T Consensus 236 ~lv~e~~~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~--~~~vkL~DFGla~ 308 (461)
T PHA03211 236 CLVLPKYRSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG--PEDICLGDFGAAC 308 (461)
T ss_pred EEEEEccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC--CCCEEEcccCCce
Confidence 99999999999988765422 3889999999999999999999999999999999999984 6779999999987
Q ss_pred ccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-------HHHHHHHHHhhcCCc
Q 001034 1027 FETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS-------PATLLARVIGIIGPI 1094 (1182)
Q Consensus 1027 ~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d-------~~elLakIv~ilGp~ 1094 (1182)
..... ....+||+.|+|||++.+..++.++||||||||||||++|..|+.... ....+.+++...+..
T Consensus 309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~ 388 (461)
T PHA03211 309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388 (461)
T ss_pred ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence 54322 123568999999999999999999999999999999999886553311 123334444332221
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccc-cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKK-TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~-~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...+..... ..... ..... ......+.. ......+...+..+.+||.+||++||.+|||+.|||+||||
T Consensus 389 ~~~~~~~~~---~~l~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f 458 (461)
T PHA03211 389 VDEFPQHAG---SRLVS--QYRHR-----AARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458 (461)
T ss_pred cccCCCCcc---hHHHH--HHHhh-----hhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCccc
Confidence 111100000 00000 00000 000001110 00111223456789999999999999999999999999999
Q ss_pred CC
Q 001034 1174 SH 1175 (1182)
Q Consensus 1174 k~ 1175 (1182)
+.
T Consensus 459 ~~ 460 (461)
T PHA03211 459 QS 460 (461)
T ss_pred CC
Confidence 75
No 139
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.2e-37 Score=327.69 Aligned_cols=258 Identities=24% Similarity=0.393 Sum_probs=203.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
+|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+.| |||++++++|......+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~ 75 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS------PYIIGFYGAFFVENRIS 75 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC------CCeeeEEEEEEECCEEE
Confidence 5889999999999999999999999999999997642 333457788888888765 48999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+||||++++.+.... .+++..+..++.||+.||.|||+.||+|+||||+|||++. ++.++|+|||++..
T Consensus 76 lv~e~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~--~~~~~l~dfg~~~~ 144 (279)
T cd06619 76 ICTEFMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT--RGQVKLCDFGVSTQ 144 (279)
T ss_pred EEEecCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC--CCCEEEeeCCccee
Confidence 999999986654331 1678889999999999999999999999999999999985 77899999999875
Q ss_pred cCC-CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1028 ETD-HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1028 ~~~-~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
... .....+++..|+|||++.+..++.++|+|||||++|+|++|..||......... ..+..+..
T Consensus 145 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~--------~~~~~~~~------ 210 (279)
T cd06619 145 LVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS--------LMPLQLLQ------ 210 (279)
T ss_pred cccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc--------cchHHHHH------
Confidence 433 234567899999999999999999999999999999999999999652211000 00000000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
. .... .+ ........+..+++||.+||+.+|.+||++.++|+||||...-.+
T Consensus 211 -~---------------~~~~-~~----~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~ 262 (279)
T cd06619 211 -C---------------IVDE-DP----PVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDG 262 (279)
T ss_pred -H---------------Hhcc-CC----CCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCc
Confidence 0 0000 00 000112356889999999999999999999999999999876443
No 140
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4e-37 Score=322.56 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=202.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec----
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR---- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~---- 943 (1182)
.++|++.+.||.|+||.||+|.+..+++.||+|++.........+..|+.+++.+. .|+||++++++|...
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-----CCCCeeeEeeEEeecCCCC
Confidence 46799999999999999999999999999999999876555567788888888874 245999999998763
Q ss_pred --CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 --EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 --e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
..+|+||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+++|+|+||||+||+++. ++.++|+
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~--~~~~~l~ 153 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE--NAEVKLV 153 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC--CCCEEEc
Confidence 468999999985 67776654321 23788899999999999999999999999999999999994 6779999
Q ss_pred cCCCccccCC---CcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETD---HLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~---~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++..... ......+++.|+|||++. ...++.++|||||||++|+|++|..||...........+..
T Consensus 154 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~--- 230 (272)
T cd06637 154 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR--- 230 (272)
T ss_pred cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---
Confidence 9999875432 233457889999999986 34688899999999999999999999976544332222110
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
.+ .........+..+.+||.+||..+|.+|||+.++++|||
T Consensus 231 ------------------------------------~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 231 ------------------------------------NP---APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred ------------------------------------CC---CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 00 000011234678999999999999999999999999999
Q ss_pred C
Q 001034 1173 L 1173 (1182)
Q Consensus 1173 F 1173 (1182)
|
T Consensus 272 ~ 272 (272)
T cd06637 272 I 272 (272)
T ss_pred C
Confidence 8
No 141
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.3e-37 Score=322.51 Aligned_cols=276 Identities=30% Similarity=0.481 Sum_probs=216.7
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--Ce
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--EH 945 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e~ 945 (1182)
|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.+.| +||+++++++... ..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH------PNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccC------CCeeeheeeEecCCCCc
Confidence 688999999999999999999999999999998652 334567788999988864 4899999999988 89
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||++++|..++.... ..+++..++.++.||+.||.|||+.|++|+||+|+|||++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~--~~~~~l~d~g~~ 147 (287)
T cd07840 75 IYMVFEYMDHDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN--DGVLKLADFGLA 147 (287)
T ss_pred EEEEeccccccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcC--CCCEEEccccce
Confidence 99999999998888776442 13889999999999999999999999999999999999995 778999999998
Q ss_pred cccCCC----cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDH----LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~----~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+..+....+.++...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07840 148 RPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP 227 (287)
T ss_pred eeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence 765433 223456788999998765 458899999999999999999999999988888888887766655443322
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPM-GDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~-~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...... .+ .......+....+...... ++..+.+||++||.++|.+||++.++++||||
T Consensus 228 ~~~~~~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 228 GVSKLP-WF-------------ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccccch-hh-------------hhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 211110 00 0000000000111111222 37899999999999999999999999999998
No 142
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=5.1e-37 Score=338.55 Aligned_cols=283 Identities=29% Similarity=0.543 Sum_probs=224.6
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.++|++++.||.|+||.||++.+..+++.||||++.... .....+..|+.+++.+.|+ ||++++++|...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~ 86 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHE------NVIGLLDVFTPD 86 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCC------CccceeeeecCC
Confidence 4678999999999999999999999999999999986532 2334567889999888654 899999998765
Q ss_pred C------eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 944 E------HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 944 e------~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
. ..|+||+|++++|..++... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07880 87 LSLDRFHDFYLVMPFMGTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE--DCEL 157 (343)
T ss_pred ccccccceEEEEEecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCE
Confidence 3 46999999977777666421 2889999999999999999999999999999999999984 6789
Q ss_pred EEecCCCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1018 KVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
+|+|||++...........+++.|+|||++.+ ..++.++|+|||||++|+|++|++||...+....+..++...+..+.
T Consensus 158 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 158 KILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred EEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999999876655555678899999999876 45889999999999999999999999998888888888877776665
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhcccc--ccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPK--KTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk--~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
.+......... .......|. ...+....+.++..+.+||.+||+.||.+|||+.+++.||||+
T Consensus 238 ~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~ 302 (343)
T cd07880 238 EFVQKLQSEDA---------------KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFE 302 (343)
T ss_pred HHHHhhcchhH---------------HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHh
Confidence 55433211100 000000111 0112223356678999999999999999999999999999998
Q ss_pred CCCCC
Q 001034 1175 HPYEP 1179 (1182)
Q Consensus 1175 ~~~eP 1179 (1182)
...++
T Consensus 303 ~~~~~ 307 (343)
T cd07880 303 EFHDP 307 (343)
T ss_pred hhcCc
Confidence 75443
No 143
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.6e-37 Score=321.39 Aligned_cols=276 Identities=31% Similarity=0.454 Sum_probs=214.7
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe--
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH-- 945 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~-- 945 (1182)
|++.+.||.|+||.||+|++..+++.||+|+++... .....+..|+.+++.+... .|+||++++++|.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESF---EHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhcc---CCCCcceEEEEEeeccCCC
Confidence 688999999999999999998899999999997532 2233455677777777533 47799999999998876
Q ss_pred ---EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 946 ---LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 946 ---LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+++||||+.++|.+++...... .+++..++.++.||+.||.|||+.+++|+||+|+|||++. ++.+||+||
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~--~~~~~l~df 151 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPKP----GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTS--DGQVKIADF 151 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEcc--CCCEEEecc
Confidence 9999999999888877654321 3889999999999999999999999999999999999995 578999999
Q ss_pred CCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1023 GSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1023 GLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
|++...... .....++..|+|||++.+..++.++|+|||||++|+|++|++||...+..+.+.+++...+.....-+.
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 152 GLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred CcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcC
Confidence 998764332 234457888999999999999999999999999999999999999999888888887655432211100
Q ss_pred cccc-cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1101 KGRD-TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1101 ~~k~-s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.... ....+ ............+..+..+.+||.+||+.||.+||++.++|.||||
T Consensus 232 ~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 232 RNVSLPRSSF------------------PSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred CCcccchhhc------------------ccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0000 00000 0000001111223446789999999999999999999999999998
No 144
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.1e-37 Score=326.97 Aligned_cols=278 Identities=28% Similarity=0.486 Sum_probs=214.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch---hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD---FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~---~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|++..... ....+.+|+.+++.+.| +||++++++|.....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~ 74 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH------ENLVNLIEVFRRKKR 74 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC------cchhhHHHhcccCCe
Confidence 469999999999999999999999999999999865432 23456678888888765 489999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
.|+||||+.++++..+..... .+++..+..++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~--~~~~~l~dfg~~ 147 (286)
T cd07846 75 LYLVFEFVDHTVLDDLEKYPN-----GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ--SGVVKLCDFGFA 147 (286)
T ss_pred EEEEEecCCccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCcEEEEeeeee
Confidence 999999999876665543321 2788999999999999999999999999999999999984 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
...... .....++..|+|||++.+ ..++.++|||||||++|+|++|++||......+.+..+....+.+......
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 226 (286)
T cd07846 148 RTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE- 226 (286)
T ss_pred eeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH-
Confidence 754322 223467889999999875 457889999999999999999999999888888888877666654332111
Q ss_pred ccccchhhcccchhhhhhcchhhhhh-ccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEY-LIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~-liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.+.... ....... ..+.........+..+..+.+||.+||..+|.+||++.++|+||||
T Consensus 227 ------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 227 ------IFQKNP-------LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ------Hhccch-------HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000000 0000000 0011111222345668899999999999999999999999999998
No 145
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.7e-37 Score=359.02 Aligned_cols=257 Identities=25% Similarity=0.309 Sum_probs=208.6
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
...++|++.+.||+|+||+||+|++..+++.||||++.... ........|+.++..+. |++|++++..|..
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~------h~~iv~~~~~~~~ 102 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCD------FFSIVKCHEDFAK 102 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCC------CCcEEEeecceec
Confidence 34579999999999999999999999999999999997542 33345667777777664 4589999888764
Q ss_pred cC--------eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC
Q 001034 943 RE--------HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS 1013 (1182)
Q Consensus 943 ~e--------~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~ 1013 (1182)
.. .+++||||+. |+|.+++...... ...+++..+..++.||+.||.|||+.+|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~-- 178 (496)
T PTZ00283 103 KDPRNPENVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS-- 178 (496)
T ss_pred ccccCcccceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeC--
Confidence 32 4789999998 4787777644322 224889999999999999999999999999999999999984
Q ss_pred CceEEEecCCCccccCC-----CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 001034 1014 RCEVKVIDLGSSCFETD-----HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1014 dG~IKLiDFGLA~~~~~-----~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv 1088 (1182)
++.+||+|||+++.... .....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+..+.
T Consensus 179 ~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~ 258 (496)
T PTZ00283 179 NGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL 258 (496)
T ss_pred CCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 67899999999875432 2335679999999999999999999999999999999999999998887766655543
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
.... ....+..+..+.+||.+||+.||.+||++.++|
T Consensus 259 ~~~~-------------------------------------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell 295 (496)
T PTZ00283 259 AGRY-------------------------------------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLL 295 (496)
T ss_pred cCCC-------------------------------------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 1000 001124568899999999999999999999999
Q ss_pred cCCCCCC
Q 001034 1169 KHPWLSH 1175 (1182)
Q Consensus 1169 qHPWFk~ 1175 (1182)
+|||++.
T Consensus 296 ~~p~~~~ 302 (496)
T PTZ00283 296 NMPICKL 302 (496)
T ss_pred hCHHHHH
Confidence 9999864
No 146
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1e-36 Score=330.00 Aligned_cols=291 Identities=26% Similarity=0.329 Sum_probs=211.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||++.+..++..+|+|.+... ......+.+|+++++.+.|+ ||++++++|....++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSP------YIVGFYGAFYSDGEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCC------CCCeEEEEEeeCCEE
Confidence 3699999999999999999999999999999998754 23345677899998888554 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
|+||||+.+ +|.+++.... .+++..+..++.||+.||.|||+ ++++|+||||+|||++. ++.+||+|||+
T Consensus 75 ~lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 146 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNS--RGEIKLCDFGV 146 (308)
T ss_pred EEEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEec--CCcEEEccCCC
Confidence 999999985 6777765432 27888999999999999999997 69999999999999984 67799999999
Q ss_pred ccccCC-CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1025 SCFETD-HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1025 A~~~~~-~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
+..... .....++++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+ ...+........
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~ 222 (308)
T cd06615 147 SGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMF----GRPVSEGEAKES 222 (308)
T ss_pred cccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhh----cCccccccccCC
Confidence 865432 234567899999999998888999999999999999999999999876644433222 111111000000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
....... ....................... ......++.++.+||.+||..+|.+|||+.+||+||||.....+
T Consensus 223 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 296 (308)
T cd06615 223 HRPVSGH-PPDSPRPMAIFELLDYIVNEPPP-KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELE 296 (308)
T ss_pred cccccCC-CCCccchhhHHHHHHHHhcCCCc-cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccc
Confidence 0000000 00000000000011111110000 01112357889999999999999999999999999999886544
No 147
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.1e-37 Score=339.77 Aligned_cols=283 Identities=31% Similarity=0.576 Sum_probs=226.1
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.++|++.+.||.|+||.||+|++..+++.||||++... .........|+.+++.+.| +||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~ 86 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDH------ENVIGLLDVFTPA 86 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccC------CCHHHHHHHhhcc
Confidence 467899999999999999999999999999999998653 2233456678888888765 4899998887765
Q ss_pred Ce------EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 944 EH------LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 944 e~------LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
.. +|+|+||++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||+++. .+.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~--~~~~ 157 (343)
T cd07851 87 SSLEDFQDVYLVTHLMGADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNE--DCEL 157 (343)
T ss_pred ccccccccEEEEEecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCCE
Confidence 54 9999999988888877631 2889999999999999999999999999999999999995 6779
Q ss_pred EEecCCCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1018 KVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
+|+|||++...........++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..++..++.++.
T Consensus 158 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 158 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred EEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 99999999876655556678899999999865 36889999999999999999999999998888888998888887766
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccc--cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKK--TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~--~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
.++....... ...+-...+.. ..........+..+.+||++||..+|.+|||+.+||+||||.
T Consensus 238 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~ 302 (343)
T cd07851 238 ELLQKISSES---------------ARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302 (343)
T ss_pred HHHhhccchh---------------HHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence 5554322100 00000000000 111112234578999999999999999999999999999998
Q ss_pred CCCCC
Q 001034 1175 HPYEP 1179 (1182)
Q Consensus 1175 ~~~eP 1179 (1182)
....|
T Consensus 303 ~~~~~ 307 (343)
T cd07851 303 EYHDP 307 (343)
T ss_pred ccCCC
Confidence 76554
No 148
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.3e-36 Score=333.86 Aligned_cols=286 Identities=30% Similarity=0.521 Sum_probs=227.0
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe-
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY- 942 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd- 942 (1182)
+.++|++++.||.|+||.||+|.+..+++.||||++.+.. .....+..|+.+++.+.| |||++++++|..
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRH------ENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCC------CCeeeEeeeEecC
Confidence 5688999999999999999999999999999999886432 234566788899888865 489999999976
Q ss_pred cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 943 REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 943 ~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
...+|+||||++++|..++... .+++..+..++.||+.||.|||+.+|+||||+|.|||++. ++.++|+||
T Consensus 82 ~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~--~~~~~l~df 152 (328)
T cd07856 82 LEDIYFVTELLGTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINE--NCDLKICDF 152 (328)
T ss_pred CCcEEEEeehhccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECC--CCCEEeCcc
Confidence 4679999999988887766422 2677888899999999999999999999999999999984 678999999
Q ss_pred CCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1023 GSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1023 GLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
|++...........+++.|+|||++.+ ..++.++|||||||++|+|++|++||........+..+...++.++..+...
T Consensus 153 g~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 153 GLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 999866555555677889999999876 5789999999999999999999999999888888888888888887766543
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
.... ....+.. ..............+..+..+.+||++||+.+|.+|||+.++|.||||+..-.|.
T Consensus 233 ~~~~------~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~ 298 (328)
T cd07856 233 ICSE------NTLRFVQ-------SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPT 298 (328)
T ss_pred ccch------hhHHHHh-------hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCc
Confidence 2110 0000000 0000000111122345678999999999999999999999999999997765553
No 149
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.9e-37 Score=335.04 Aligned_cols=289 Identities=21% Similarity=0.257 Sum_probs=201.5
Q ss_pred EEEEeccC--CceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 873 VTEYLGSA--AFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 873 Ilk~LGkG--aFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
++++||+| +|++||++.++.+|+.||||++.... .....+.+|+.+++.++| |||++++++|.....+|
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------pniv~~~~~~~~~~~~~ 75 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH------PNIVPYRATFIADNELW 75 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC------CCeeeEEEEEEECCEEE
Confidence 56789999 78999999999999999999997542 333456678888887755 48999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+.+ +|.+++...... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.++|+||+...
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~--~~~~~l~~~~~~~ 149 (327)
T cd08227 76 VVTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV--DGKVYLSGLRSNL 149 (327)
T ss_pred EEEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec--CCcEEEcccchhh
Confidence 99999985 677776543221 2788999999999999999999999999999999999984 6779999998643
Q ss_pred ccCC----------CcccccCCCcccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1027 FETD----------HLCSYVQSRSYRAPEVILG--LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1027 ~~~~----------~~ss~vGTp~YmAPEVLlg--~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
.... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||........+..... +..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~ 227 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTV 227 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCc
Confidence 2211 1122356778999999976 4689999999999999999999999987555443333321 221
Q ss_pred chhhhhcccccchhh----cccchhhhhhcchhhhhhccccc--cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1095 EQGMLAKGRDTYKYF----TKNHMLYERNQETNRLEYLIPKK--TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F----~k~~~~~er~~ets~Le~liPk~--~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
+..+ .........+ .+... ..............+.. .........++..+.+||.+||++||++|||+.+||
T Consensus 228 ~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 228 PCLL-DTTTIPAEELTMKPSRSGA-NSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred cccc-cccchhhhhcccCCcccCC-cCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 1100 0000000000 00000 00000000000000000 011112234578999999999999999999999999
Q ss_pred cCCCCCCCC
Q 001034 1169 KHPWLSHPY 1177 (1182)
Q Consensus 1169 qHPWFk~~~ 1177 (1182)
+||||+...
T Consensus 306 ~~p~f~~~~ 314 (327)
T cd08227 306 NHSFFKQIK 314 (327)
T ss_pred cChhhhhcc
Confidence 999998753
No 150
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=7.4e-37 Score=325.75 Aligned_cols=279 Identities=27% Similarity=0.419 Sum_probs=214.4
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
.++|++.+.||.|+||.||+|.++.+++.+|||++.... .......+|+.+++.+.|+ ||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~ 80 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHP------NVVPLIDMAVERP 80 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCC------Cccchhhheeccc
Confidence 588999999999999999999999999999999986532 1223456788999888654 899999887543
Q ss_pred -------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCce
Q 001034 944 -------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCE 1016 (1182)
Q Consensus 944 -------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~ 1016 (1182)
..+|+||+|+.+++...+.... ..+++..++.++.||+.||.|||++||+|+||||+|||++. ++.
T Consensus 81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~--~~~ 153 (311)
T cd07866 81 DKSKRKRGSVYMVTPYMDHDLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN--QGI 153 (311)
T ss_pred ccccccCceEEEEEecCCcCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC--CCC
Confidence 3579999999988877765432 23899999999999999999999999999999999999994 678
Q ss_pred EEEecCCCccccCCCc--------------ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Q 001034 1017 VKVIDLGSSCFETDHL--------------CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPA 1081 (1182)
Q Consensus 1017 IKLiDFGLA~~~~~~~--------------ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~ 1081 (1182)
++|+|||++....... ....+++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999986533211 223567889999998754 5889999999999999999999999998888
Q ss_pred HHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1082 TLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1082 elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
..+..+....+.++...+........... ... .......+...+...+..+.+||.+||+.||.+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 299 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGWRSLPGCEG------------VHS--FTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKR 299 (311)
T ss_pred HHHHHHHHHhCCCChhhchhhhhcccccc------------ccc--CCCCCccHHHHcccCChhHHHHHHHHcccCcccC
Confidence 88888877766554433222111110000 000 0000011112233456889999999999999999
Q ss_pred CCHHHHHcCCCC
Q 001034 1162 PSASDALKHPWL 1173 (1182)
Q Consensus 1162 PTAeELLqHPWF 1173 (1182)
||+.++|.||||
T Consensus 300 ~t~~ell~~~~f 311 (311)
T cd07866 300 LTASDALEHPYF 311 (311)
T ss_pred cCHHHHhcCCCC
Confidence 999999999998
No 151
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.8e-37 Score=323.29 Aligned_cols=254 Identities=26% Similarity=0.410 Sum_probs=203.3
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe----
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY---- 942 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd---- 942 (1182)
..+.|++.+.||.|+||.||+|++..+++.+|+|++.........+..|+.+++.+. .|+||++++++|..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~ 88 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-----HHRNIATYYGAFIKKSPP 88 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-----CCCcEEEEeeehhccccc
Confidence 347899999999999999999999999999999999876655566778888888874 34599999999863
Q ss_pred --cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 943 --REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 943 --~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
..++|+||||+.+ +|.+++..... ..+++..++.++.||+.||.|||+.+|+|+||+|+||+++. ++.++|
T Consensus 89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~--~~~~~l 162 (282)
T cd06636 89 GHDDQLWLVMEFCGAGSVTDLVKNTKG----NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTE--NAEVKL 162 (282)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEE
Confidence 4678999999986 67777654332 12778888999999999999999999999999999999994 677999
Q ss_pred ecCCCccccCC---CcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 001034 1020 IDLGSSCFETD---HLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1020 iDFGLA~~~~~---~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~il 1091 (1182)
+|||++..... ......+++.|+|||++. ...++.++|+|||||++|+|++|.+||....+...+..+..
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-- 240 (282)
T cd06636 163 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-- 240 (282)
T ss_pred eeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh--
Confidence 99999865432 233457889999999986 34688899999999999999999999976554332222110
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHP 1171 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHP 1171 (1182)
. .+ .......++..+.+||++||+.||.+|||+.+||+||
T Consensus 241 -~-----------------------------------~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~ 280 (282)
T cd06636 241 -N-----------------------------------PP----PKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHP 280 (282)
T ss_pred -C-----------------------------------CC----CCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence 0 00 0001123568899999999999999999999999999
Q ss_pred CC
Q 001034 1172 WL 1173 (1182)
Q Consensus 1172 WF 1173 (1182)
||
T Consensus 281 ~~ 282 (282)
T cd06636 281 FI 282 (282)
T ss_pred CC
Confidence 98
No 152
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.2e-36 Score=325.37 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=204.8
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.|++.+.||.|+||+||++.+..+++.||+|++.... ........|+.+++.++|+ +|+.+++.|.....
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~------~i~~~~~~~~~~~~ 74 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ------FVVNLAYAYETKDA 74 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCc------CceeEEEEEecCCE
Confidence 3788899999999999999999999999999997543 2223456788999888655 89999999999999
Q ss_pred EEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.++ |..++..... ..+++..+..++.||+.||.|||+.||+||||||+|||++. .+.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~--~~~~kl~Dfg~ 148 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDD--YGHIRISDLGL 148 (285)
T ss_pred EEEEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECC--CCCEEEecCCc
Confidence 99999999964 5544433221 13899999999999999999999999999999999999984 56799999999
Q ss_pred ccccCC--CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1025 SCFETD--HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1025 A~~~~~--~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
+..... ......+++.|+|||++.+..++.++|+|||||++|+|++|..||.+.........+........
T Consensus 149 ~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~------- 221 (285)
T cd05632 149 AVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE------- 221 (285)
T ss_pred ceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc-------
Confidence 865432 22345789999999999999999999999999999999999999987665444333321000000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
.......+..+.+||.+||+.||.+||+ +.+++.||||...
T Consensus 222 ---------------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 222 ---------------------------------EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred ---------------------------------cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 0011234678999999999999999999 8999999999764
No 153
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-36 Score=313.19 Aligned_cols=249 Identities=24% Similarity=0.396 Sum_probs=206.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.|.+.+.||+|+||.||+|.+..+++.|++|.+... ......+..|+.+++.+.| |||+++++++.....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~ 74 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS------SYIIRYYESFLDKGKL 74 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC------CCeehheeeeccCCEE
Confidence 488999999999999999999999999999998753 2345567778888887755 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++..... ..++...+..++.||+.||.|||+.||+|+||||+||+++. .+.++|+|||++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~--~~~~~l~df~~~ 148 (256)
T cd08529 75 NIVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDA--YDNVKIGDLGVA 148 (256)
T ss_pred EEEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeC--CCCEEEcccccc
Confidence 999999975 77777765321 13888899999999999999999999999999999999994 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+......++.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 218 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF---------- 218 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC----------
Confidence 754432 2234678899999999999999999999999999999999999988776655554421000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
+ .....++..+.++|++||+.+|++||++.++++|||+
T Consensus 219 ---------------------------~------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 219 ---------------------------P------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ---------------------------C------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 0 0011346789999999999999999999999999996
No 154
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=6.1e-37 Score=337.34 Aligned_cols=281 Identities=29% Similarity=0.538 Sum_probs=219.9
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.++|.+.+.||.|+||.||+|.++.+++.||||++.+. ......+..|+.+++.+.|+ ||++++++|...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~~~~~ 86 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHE------NVIGLLDVFTSA 86 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCC------Cccchhheeccc
Confidence 357899999999999999999999999999999998753 22334567888888887654 899999998754
Q ss_pred ------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 944 ------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 944 ------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
..+|+||||+..++..+.. ..+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~~~--------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~--~~~~ 156 (342)
T cd07879 87 VSGDEFQDFYLVMPYMQTDLQKIMG--------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE--DCEL 156 (342)
T ss_pred ccCCCCceEEEEecccccCHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCE
Confidence 3569999999876655431 12788999999999999999999999999999999999984 6789
Q ss_pred EEecCCCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1018 KVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
||+|||++...........+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..++...+.++.
T Consensus 157 kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (342)
T cd07879 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGP 236 (342)
T ss_pred EEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999998766555555677899999999876 46899999999999999999999999998888888888877776554
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+......... ..+ ...+ .......+....+..+..+++||++||+.||.+||++.+||.||||...
T Consensus 237 ~~~~~~~~~~~------~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 237 EFVQKLEDKAA------KSY-----IKSL--PKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHhcccch------HHH-----Hhhc--CCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 44332211100 000 0000 0000111222334567889999999999999999999999999999765
No 155
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.4e-36 Score=313.51 Aligned_cols=249 Identities=22% Similarity=0.346 Sum_probs=202.3
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-Ce
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-EH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~-e~ 945 (1182)
.|++++.||.|+||.||++.++.+++.||+|.+.... .....+..|+.+++.+.|+ +++++++.|... ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHP------NIVAYRESWEGEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCC------CeeeeeeeecCCCCE
Confidence 4899999999999999999999999999999987542 3344567788888887654 899999988643 46
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+++ +|.+++..... ..+++..+..++.||+.||.|||+.||+|+||||+||+++. .+.++|+|||+
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~--~~~~~l~df~~ 148 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTR--TNIIKVGDLGI 148 (257)
T ss_pred EEEEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEec--CCcEEEecccc
Confidence 8999999985 67666654321 13789999999999999999999999999999999999984 67899999999
Q ss_pred ccccCC---CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1025 SCFETD---HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1025 A~~~~~---~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+..... ......+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+.......+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--------- 219 (257)
T cd08223 149 ARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--------- 219 (257)
T ss_pred eEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC---------
Confidence 875432 22345678999999999999999999999999999999999999987665554444321000
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
+ ......+..+.+||.+||+.+|.+|||+.++|+||||
T Consensus 220 ----------------------------~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 220 ----------------------------P------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ----------------------------C------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 0112356789999999999999999999999999998
No 156
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=6.6e-37 Score=326.13 Aligned_cols=249 Identities=22% Similarity=0.306 Sum_probs=194.1
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||+|+||.||+++++.+|+.||+|.+.... ........|+.+++.+.| |||++++++|....++|+||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h------p~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS------PFIVNLAYAFESKTHLCLVMSL 74 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC------CcEEEEEEEEecCCeEEEEEec
Confidence 699999999999999999999999996532 122344568888888755 4899999999999999999999
Q ss_pred ccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+.| +|..++.... ...+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++......
T Consensus 75 ~~g~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~--~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 75 MNGGDLKYHIYNVG----ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDD--QGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCCHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcC--CCCEEEeeceeeeecCCC
Confidence 986 5555554322 123788889999999999999999999999999999999984 677999999998754432
Q ss_pred --cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhh
Q 001034 1032 --LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYF 1109 (1182)
Q Consensus 1032 --~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F 1109 (1182)
.....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...........+...
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~------------------- 209 (277)
T cd05607 149 KTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR------------------- 209 (277)
T ss_pred ceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH-------------------
Confidence 23456899999999999989999999999999999999999999754321111111000
Q ss_pred cccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH----HHHHcCCCCCCC
Q 001034 1110 TKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA----SDALKHPWLSHP 1176 (1182)
Q Consensus 1110 ~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA----eELLqHPWFk~~ 1176 (1182)
.+... .......++.++++||.+||++||.+||++ .+++.||||+..
T Consensus 210 --------------~~~~~------~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 210 --------------TLEDE------VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred --------------hhccc------cccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 00000 000112457889999999999999999999 678899999763
No 157
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1e-36 Score=324.69 Aligned_cols=281 Identities=26% Similarity=0.460 Sum_probs=217.0
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
...++|++.+.||.|+||.||+|.++.+++.||+|+++... ........|+.+++.++|+ ||+++++++..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~------~i~~~~~~~~~ 77 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR------NIVNLKEIVTD 77 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC------CeeeeeheecC
Confidence 45678999999999999999999999999999999997542 2234556788888888654 89999999876
Q ss_pred cC----------eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC
Q 001034 943 RE----------HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY 1012 (1182)
Q Consensus 943 ~e----------~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~ 1012 (1182)
.. ++|+||||+++++..++.... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.
T Consensus 78 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~- 151 (302)
T cd07864 78 KQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNN- 151 (302)
T ss_pred cchhhhccccCCcEEEEEcccCccHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC-
Confidence 55 899999999998887766432 13889999999999999999999999999999999999984
Q ss_pred CCceEEEecCCCccccCCCc----ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 001034 1013 SRCEVKVIDLGSSCFETDHL----CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARV 1087 (1182)
Q Consensus 1013 ~dG~IKLiDFGLA~~~~~~~----ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakI 1087 (1182)
++.+||+|||++....... ....++..|+|||++.+. .++.++|||||||++|+|++|++||...+....+..+
T Consensus 152 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~ 230 (302)
T cd07864 152 -KGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELI 230 (302)
T ss_pred -CCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 7789999999987643322 223457789999998654 5788999999999999999999999998888888888
Q ss_pred HhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHH
Q 001034 1088 IGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDA 1167 (1182)
Q Consensus 1088 v~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeEL 1167 (1182)
....+.++...+....... .+.. ..........+.......+..+.+||.+||+.||.+|||+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~-~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~i 296 (302)
T cd07864 231 SRLCGSPCPAVWPDVIKLP-YFNT-------------MKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEA 296 (302)
T ss_pred HHHhCCCChhhcccccccc-cccc-------------cccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 8777655443322211100 0000 0000000001111223457889999999999999999999999
Q ss_pred HcCCCC
Q 001034 1168 LKHPWL 1173 (1182)
Q Consensus 1168 LqHPWF 1173 (1182)
|.||||
T Consensus 297 l~~~~~ 302 (302)
T cd07864 297 LNSPWL 302 (302)
T ss_pred hcCCCC
Confidence 999998
No 158
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.6e-37 Score=353.98 Aligned_cols=255 Identities=25% Similarity=0.289 Sum_probs=208.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCC-CcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHT-GMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~T-Gr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
...|.+.+.||+|+||.||+|.+..+ ++.||+|.+.... .....+..|+.+|+.+.| ||||+++++|....+
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H------pniv~~~~~~~~~~~ 139 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH------FGIVKHFDDFKSDDK 139 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC------CCEeEEEEEEEECCE
Confidence 34599999999999999999998877 7889999875543 333456678888888755 489999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+||||||+.| +|.+++..... ....+++..+..++.||+.||.|||+.+|+||||||+|||++. .+.+||+|||+
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~--~~~~kL~DFgl 215 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMP--TGIIKLGDFGF 215 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECC--CCcEEEEeCcC
Confidence 9999999985 67666643321 1234889999999999999999999999999999999999994 67899999999
Q ss_pred ccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1025 SCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1025 A~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
++..... ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+++..++....+
T Consensus 216 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~------ 289 (478)
T PTZ00267 216 SKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD------ 289 (478)
T ss_pred ceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC------
Confidence 9764432 33457999999999999999999999999999999999999999887776666555310000
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
.....++..+.+||.+||..||.+||++.++|.|||++.
T Consensus 290 -------------------------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 290 -------------------------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred -------------------------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 001234678999999999999999999999999999864
No 159
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-36 Score=315.38 Aligned_cols=250 Identities=28% Similarity=0.452 Sum_probs=205.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
++|++.+.||.|+||.||++....+++.||+|.+..... ...+.+|+.+++.++| +||++++++|....++|+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDS------PYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCC------CcEeeeeeeeecCCcEEE
Confidence 579999999999999999999998899999999986654 6678889999988844 489999999999999999
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|+||+.+ +|.+++.... ..+++..++.++.||+.||.|||+.+++|+||+|+||+++. .+.++|+|||++..
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~--~~~~~l~dfg~~~~ 148 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNE--EGQAKLADFGVSGQ 148 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECC--CCcEEEcccccchh
Confidence 9999996 6666664332 23889999999999999999999999999999999999995 67799999999876
Q ss_pred cCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1028 ETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1028 ~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
..... ....++..|+|||++.+..++.++||||||||+|+|++|++||....+......+....
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 215 (256)
T cd06612 149 LTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKP------------- 215 (256)
T ss_pred cccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCC-------------
Confidence 54332 33457889999999999999999999999999999999999998765543322221000
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.+ ........+..+.+||.+||+.||.+|||+.++|+||||
T Consensus 216 ------------------------~~----~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 216 ------------------------PP----TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred ------------------------CC----CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 00 000112346789999999999999999999999999998
No 160
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.4e-36 Score=316.03 Aligned_cols=256 Identities=27% Similarity=0.432 Sum_probs=205.4
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC---
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE--- 944 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e--- 944 (1182)
.++|++.+.||.|+||.||+|.+..+++.+++|++.........+..|+.+++.+. .|+||++++++|....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-----NHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-----CCCChheEEEEEEecCCCC
Confidence 47899999999999999999999999999999999877665677888999999874 2459999999997654
Q ss_pred ---eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 945 ---HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 945 ---~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
.+|+||||+.+ +|.+++....... ..+++..++.++.||+.||.|||+.+++|+||+|+||+++. ++.++|+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~--~~~~~l~ 155 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKG--KRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTK--NAEVKLV 155 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEcc--CCeEEEC
Confidence 48999999996 6666665433111 23889999999999999999999999999999999999984 6789999
Q ss_pred cCCCccccCC---CcccccCCCcccchhhhcC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETD---HLCSYVQSRSYRAPEVILG-----LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~---~~ss~vGTp~YmAPEVLlg-----~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++..... ......+++.|+|||++.. ..++.++|||||||+||+|++|++||........+.++...
T Consensus 156 d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-- 233 (275)
T cd06608 156 DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN-- 233 (275)
T ss_pred CCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc--
Confidence 9999865432 2234568889999999864 34778999999999999999999999876554444433210
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
+. +. .......+..+.+||.+||..||.+|||+.+|++|||
T Consensus 234 ~~-----------------------------------~~----~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 234 PP-----------------------------------PT----LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred CC-----------------------------------CC----CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 00 00 0001124678999999999999999999999999999
Q ss_pred C
Q 001034 1173 L 1173 (1182)
Q Consensus 1173 F 1173 (1182)
+
T Consensus 275 ~ 275 (275)
T cd06608 275 I 275 (275)
T ss_pred C
Confidence 7
No 161
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=5.4e-37 Score=321.91 Aligned_cols=276 Identities=30% Similarity=0.512 Sum_probs=218.9
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch---hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD---FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~---~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
|++.+.||.|++|.||+|.+..+++.+|+|.+..... .......|+.+++.+.|+ +|+++++++.....+|
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~~ 74 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHP------NIIKLLDVFRHKGDLY 74 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCC------CcchHHHhhccCCCEE
Confidence 6678899999999999999999999999999875432 345677888899888644 8999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+||||+.+++..++.... ..+++..+..++.||+.||.|||+.+|+|+||||+||+++. ++.++|+|||.+..
T Consensus 75 ~v~e~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~df~~~~~ 147 (283)
T cd05118 75 LVFEFMDTDLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINT--EGVLKLADFGLARS 147 (283)
T ss_pred EEEeccCCCHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECC--CCcEEEeeeeeeEe
Confidence 999999998888876543 13889999999999999999999999999999999999994 67899999999865
Q ss_pred cCCCc---ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1028 ETDHL---CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1028 ~~~~~---ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... ....++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...+..+.+.++...++.+...++....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (283)
T cd05118 148 FGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFT 227 (283)
T ss_pred cCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccch
Confidence 54322 234578889999999876 78999999999999999999999999988888888887776665443333221
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...... ................+..+..+++||.+||.+||.+||++.++|.||||
T Consensus 228 ~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 228 SLARNY--------------KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhh--------------hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 110000 00000000111112234568899999999999999999999999999998
No 162
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-37 Score=361.76 Aligned_cols=292 Identities=20% Similarity=0.270 Sum_probs=207.2
Q ss_pred CceecCCEEEEEEeccCCceEEEEEEECCC-CcEEEEE------------------EEeccchhhHHHHHHHHHHHHhcC
Q 001034 864 NSVIAGRYHVTEYLGSAAFSKAIQAHDLHT-GMDVCVK------------------IIKNNKDFFDQSLDEIKLLKYVNK 924 (1182)
Q Consensus 864 g~iL~drYeIlk~LGkGaFGeVyLAkDk~T-Gr~VAVK------------------IIkk~k~~~dq~l~EikILr~L~h 924 (1182)
+..+.++|++++.||+|+||+||+|..+.. +..+++| .+.........+.+|+.+|+.++|
T Consensus 143 ~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H 222 (501)
T PHA03210 143 DDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH 222 (501)
T ss_pred chhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC
Confidence 345668899999999999999999875432 2222222 222222334456788999988865
Q ss_pred CCCCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCC
Q 001034 925 HDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKP 1004 (1182)
Q Consensus 925 ~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKP 1004 (1182)
+ ||+++++++......|+||+++.++++.++....... ........++.|+.||+.||.|||++|||||||||
T Consensus 223 p------nIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~-~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP 295 (501)
T PHA03210 223 E------NILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDW-KDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKL 295 (501)
T ss_pred C------CcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccc-cccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 4 8999999999999999999999999888875432211 11234667888999999999999999999999999
Q ss_pred ccEEEccCCCceEEEecCCCccccCCC----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCC-CCC--
Q 001034 1005 ENILVKSYSRCEVKVIDLGSSCFETDH----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVL-FQN-- 1077 (1182)
Q Consensus 1005 eNILIDs~~dG~IKLiDFGLA~~~~~~----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~P-F~g-- 1077 (1182)
+|||++. ++.+||+|||++...... ....+||+.|+|||++.+..++.++|||||||+||||++|..+ |..
T Consensus 296 ~NILl~~--~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~ 373 (501)
T PHA03210 296 ENIFLNC--DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGG 373 (501)
T ss_pred HHEEECC--CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCC
Confidence 9999984 678999999999764332 2345799999999999999999999999999999999998754 432
Q ss_pred CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccC
Q 001034 1078 DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1078 ~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~D 1157 (1182)
..+...+.+++..++.....+.......+.++... ........++ .+. .....+..+.+||.+||++|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~--------~~~~~~~~~~---~~~-~~~~~~~~~~~li~kmL~~D 441 (501)
T PHA03210 374 GKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA--------EIDHAGHSVP---PLI-RNLGLPADFEYPLVKMLTFD 441 (501)
T ss_pred CCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh--------hcccCccchh---hHH-HhcCCChHHHHHHHHHhccC
Confidence 34556666666555544333322111111111000 0000000000 000 01124678999999999999
Q ss_pred CCCCCCHHHHHcCCCCCCC
Q 001034 1158 PKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1158 PekRPTAeELLqHPWFk~~ 1176 (1182)
|.+|||+.|+|.||||+..
T Consensus 442 P~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 442 WHLRPGAAELLALPLFSAE 460 (501)
T ss_pred cccCcCHHHHhhChhhhcC
Confidence 9999999999999999764
No 163
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.7e-36 Score=334.66 Aligned_cols=286 Identities=30% Similarity=0.527 Sum_probs=223.4
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.++|.+.+.||+|+||.||++.+..+++.||+|++.... .......+|+.+++.++| +||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h------~~iv~~~~~~~~~ 88 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH------ENVIGLLDVFTPA 88 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCC------Ccccceeeeeeec
Confidence 4578999999999999999999999999999999997542 223456678888888765 4899999988643
Q ss_pred ------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 944 ------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 944 ------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
...|+|++++.++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+
T Consensus 89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~--~~~~ 159 (345)
T cd07877 89 RSLEEFNDVYLVTHLMGADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE--DCEL 159 (345)
T ss_pred ccccccccEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC--CCCE
Confidence 457999999988887766432 2788999999999999999999999999999999999995 6789
Q ss_pred EEecCCCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1018 KVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
||+|||++...........+++.|+|||++.+ ..++.++|||||||++|+|++|++||...+....+..++...+..+.
T Consensus 160 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred EEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999999876655556678999999999876 56889999999999999999999999988888888888877776655
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+......... .. ....+. ..+. ..........+..+++||.+||++||.+||++.++|.||||+..
T Consensus 240 ~~~~~~~~~~~----------~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 240 ELLKKISSESA----------RN-YIQSLT-QMPK-MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 306 (345)
T ss_pred HHHhhcccHhH----------HH-HHHHhc-ccCC-cchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhc
Confidence 55433211100 00 000000 0000 00111122457889999999999999999999999999999976
Q ss_pred CCCC
Q 001034 1177 YEPI 1180 (1182)
Q Consensus 1177 ~eP~ 1180 (1182)
..|.
T Consensus 307 ~~~~ 310 (345)
T cd07877 307 HDPD 310 (345)
T ss_pred CCCC
Confidence 6554
No 164
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.1e-36 Score=314.20 Aligned_cols=256 Identities=26% Similarity=0.387 Sum_probs=206.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||+||+|....++..+|+|++.... .....+.+|+.+++.+.| ++|+++++.+......
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH------PNVVKYYTSFVVGDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC------CCEEEEEEEEeeCCEE
Confidence 46999999999999999999998999999999997543 245667788888887754 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+|||++.+ .|.+++..... ...+++..++.++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~--~~~~~l~df~~~ 149 (267)
T cd06610 75 WLVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE--DGSVKIADFGVS 149 (267)
T ss_pred EEEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEEcccchH
Confidence 999999986 56666654322 113788999999999999999999999999999999999995 677999999998
Q ss_pred cccCCCc-------ccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1026 CFETDHL-------CSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1026 ~~~~~~~-------ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
....... ...+++..|+|||++... .++.++|+|||||++|+|++|+.||...+....+.++.... +.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~---~~- 225 (267)
T cd06610 150 ASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND---PP- 225 (267)
T ss_pred HHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCC---CC-
Confidence 6543321 234688999999999876 78999999999999999999999998776655444442110 00
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
. ..........+..+.+||.+||+.||.+|||+.+|++||||
T Consensus 226 ---------------------------------~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 226 ---------------------------------S-LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred ---------------------------------C-cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 0 00000123457889999999999999999999999999998
No 165
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-36 Score=320.43 Aligned_cols=258 Identities=28% Similarity=0.410 Sum_probs=201.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||++.++.+|+.||||+++... ........|+.++.+. ..||||+++++++.....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~iv~~~~~~~~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS-----VDCPYTVTFYGALFREGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH-----cCCCCeeeeeEEEecCCcE
Confidence 46999999999999999999999999999999997643 2223444555543332 2466999999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc-CccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL-GLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~-GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||++++|..++...... ...+++..++.++.||+.||.|||++ +++||||||+|||++. ++.+||+|||++
T Consensus 76 ~lv~e~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~--~~~~kl~dfg~~ 151 (283)
T cd06617 76 WICMEVMDTSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINR--NGQVKLCDFGIS 151 (283)
T ss_pred EEEhhhhcccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECC--CCCEEEeecccc
Confidence 999999999988887654322 23489999999999999999999997 9999999999999984 678999999998
Q ss_pred cccCCCc--ccccCCCcccchhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhcCCcchhh
Q 001034 1026 CFETDHL--CSYVQSRSYRAPEVILG----LSYDKKIDIWSLGCILAELCTGNVLFQND-SPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1026 ~~~~~~~--ss~vGTp~YmAPEVLlg----~~yS~kSDIWSLGVILYELLTGr~PF~g~-d~~elLakIv~ilGp~Peem 1098 (1182)
....... ....++..|+|||++.+ ..++.++|+|||||++|+|++|+.||... ...+.+..+.. +..
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~---- 225 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPS---- 225 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCC----
Confidence 7543322 23467889999999865 45788999999999999999999999642 22222222210 000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
...+ ...++.++.+||.+||..+|.+||++.++++||||...-
T Consensus 226 ----------------------------~~~~--------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 226 ----------------------------PQLP--------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred ----------------------------CCCC--------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 0000 112468899999999999999999999999999998753
No 166
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.8e-36 Score=326.81 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=208.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|.+.+.. .....+..|+.+++.+.| ++|+++++.+....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~ 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH------PFLPTLYASFQTET 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC------CCchhheeeeecCC
Confidence 36999999999999999999999999999999998653 234456778888888764 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..|+||||+.+ +|.+++..... ..+++..++.++.||+.||.|||+.|++|+||||+|||++. ++.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~~l~dfg 148 (316)
T cd05574 75 YLCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE--SGHIMLSDFD 148 (316)
T ss_pred EEEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC--CCCEEEeecc
Confidence 99999999985 67776653321 23889999999999999999999999999999999999995 6779999999
Q ss_pred CccccCCC--------------------------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 001034 1024 SSCFETDH--------------------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTG 1071 (1182)
Q Consensus 1024 LA~~~~~~--------------------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTG 1071 (1182)
++...... .....|+..|+|||++.+..++.++|||||||++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 87543211 1134678899999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHH
Q 001034 1072 NVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVA 1151 (1182)
Q Consensus 1072 r~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIr 1151 (1182)
..||.+.+....+..+...... .+ .....+..+.+||.
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~~~-----------------------------------~~-------~~~~~~~~~~~li~ 266 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKEVT-----------------------------------FP-------GSPPVSSSARDLIR 266 (316)
T ss_pred CCCCCCCchHHHHHHHhcCCcc-----------------------------------CC-------CccccCHHHHHHHH
Confidence 9999887766655554310000 00 01124688999999
Q ss_pred HhcccCCCCCCC----HHHHHcCCCCCCC
Q 001034 1152 HLLEINPKKRPS----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1152 kMLq~DPekRPT----AeELLqHPWFk~~ 1176 (1182)
+||+.||.+||| +.+||.||||+..
T Consensus 267 ~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 267 KLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 999999999999 9999999999875
No 167
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.7e-36 Score=323.55 Aligned_cols=258 Identities=29% Similarity=0.455 Sum_probs=205.7
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
..+.|++++.||.|+||.||++++..+++.||+|++.... .....+..|+.+++.+.|+ ||+++++.|.....
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~ 83 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHP------YIVKLLGAFYWDGK 83 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCC------cEeeeEEEEEeCCe
Confidence 3467999999999999999999999999999999997543 3345667788888887654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+||||+.++.+..+..... ..+++..+..++.||+.||.|||+.+++||||||+|||++. ++.++|+|||++
T Consensus 84 ~~lv~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~kl~dfg~~ 157 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLELD----RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL--DGDIKLADFGVS 157 (292)
T ss_pred EEEEEecCCCCcHHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC--CCCEEEccCccc
Confidence 999999999765543322211 12788999999999999999999999999999999999984 678999999988
Q ss_pred cccCCC---cccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
...... .....+++.|+|||++. ...++.++|||||||++|+|++|.+||...+....+.++.....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---- 233 (292)
T cd06644 158 AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP---- 233 (292)
T ss_pred eeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc----
Confidence 653222 23456788999999985 345788999999999999999999999876665544443211000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
........+..+.+||.+||..+|.+||++.++|+||||+...
T Consensus 234 -------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 234 -------------------------------------TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred -------------------------------------cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 0001123467899999999999999999999999999998653
No 168
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.4e-36 Score=334.41 Aligned_cols=282 Identities=24% Similarity=0.402 Sum_probs=212.6
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-- 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~-- 943 (1182)
+.++|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+|+.+++.++|+ ||+++++.+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~------~i~~~~~~~~~~~~ 76 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHD------NIVKVYEVLGPSGS 76 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCC------cchhhHhhhccccc
Confidence 3578999999999999999999999999999999986543 3345677899999888654 899998766543
Q ss_pred ------------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc
Q 001034 944 ------------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS 1011 (1182)
Q Consensus 944 ------------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs 1011 (1182)
..+|+||||+.++|..++... .+++..++.++.||+.||.|||+.||+||||||+|||++.
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~ 149 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYMETDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT 149 (342)
T ss_pred ccccccccccccceEEEEeecccccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC
Confidence 368999999998887776432 2788999999999999999999999999999999999974
Q ss_pred CCCceEEEecCCCccccCCC------cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001034 1012 YSRCEVKVIDLGSSCFETDH------LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLL 1084 (1182)
Q Consensus 1012 ~~dG~IKLiDFGLA~~~~~~------~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elL 1084 (1182)
.++.+||+|||++...... .....++..|+|||++.. ..++.++|||||||++|+|++|+.||...++...+
T Consensus 150 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~ 228 (342)
T cd07854 150 -EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQM 228 (342)
T ss_pred -CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 3567999999998754321 122357889999998764 56889999999999999999999999988877777
Q ss_pred HHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 001034 1085 ARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA 1164 (1182)
Q Consensus 1085 akIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA 1164 (1182)
..+............... ....... ......+.........+..+.++++||++||++||.+|||+
T Consensus 229 ~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 294 (342)
T cd07854 229 QLILESVPVVREEDRNEL------LNVIPSF--------VRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTA 294 (342)
T ss_pred HHHHHhcCCCChHHhhhh------hhhhhhh--------hhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCH
Confidence 666544332221111100 0000000 00000011111222334567899999999999999999999
Q ss_pred HHHHcCCCCCCC
Q 001034 1165 SDALKHPWLSHP 1176 (1182)
Q Consensus 1165 eELLqHPWFk~~ 1176 (1182)
.+||.||||+..
T Consensus 295 ~ell~h~~~~~~ 306 (342)
T cd07854 295 EEALMHPYMSCY 306 (342)
T ss_pred HHHhCCCccccc
Confidence 999999999854
No 169
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.9e-36 Score=319.20 Aligned_cols=258 Identities=26% Similarity=0.373 Sum_probs=204.2
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--- 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--- 943 (1182)
..++|.+.+.||.|+||.||+|.+..+++.+|+|++.........+..|+.+++.+. .|+||++++++|...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~~~~~~~~~~~ 94 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-----NHPNVVKFYGMFYKADKL 94 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEEecccc
Confidence 468899999999999999999999999999999999765544556677888888774 256999999998754
Q ss_pred --CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 --EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 --e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
..+|+||||+.+ +|.+++....... ..+++..++.++.||+.||.|||+.+|+|+||||+||+++. .+.+||+
T Consensus 95 ~~~~~~lv~ey~~~~sL~~~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~--~~~~kl~ 170 (291)
T cd06639 95 VGGQLWLVLELCNGGSVTELVKGLLICG--QRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT--EGGVKLV 170 (291)
T ss_pred CCCeeEEEEEECCCCcHHHHHHHhhhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEe
Confidence 368999999985 6767665432111 23788999999999999999999999999999999999984 6679999
Q ss_pred cCCCccccCCC---cccccCCCcccchhhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETDH---LCSYVQSRSYRAPEVILGL-----SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~~---~ss~vGTp~YmAPEVLlg~-----~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++...... .....++..|+|||++... .++.++|||||||++|+|++|++||........+..+...
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-- 248 (291)
T cd06639 171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN-- 248 (291)
T ss_pred ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC--
Confidence 99998754321 2345678899999998643 3688999999999999999999999876655444443210
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
+.+ .. ......+..+.+||.+||+++|.+||++.+||+|||
T Consensus 249 ~~~-----------------------------------~~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 249 PPP-----------------------------------TL----LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred CCC-----------------------------------CC----CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 000 00 001123567999999999999999999999999999
Q ss_pred CC
Q 001034 1173 LS 1174 (1182)
Q Consensus 1173 Fk 1174 (1182)
|+
T Consensus 290 ~~ 291 (291)
T cd06639 290 IK 291 (291)
T ss_pred cC
Confidence 95
No 170
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=9.9e-37 Score=319.75 Aligned_cols=275 Identities=31% Similarity=0.458 Sum_probs=221.3
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
|++.+.||.|+||.||+|+...+++.||+|++... .........|+.+++.+.| ++|+++++++.....++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~~ 74 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH------PNIVKLLDVIHTERKLY 74 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC------CCHHHHHhhhhcCCceE
Confidence 67788999999999999999999999999999864 3334566778888888764 48999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+||||+.++|.+++.... ..+++..+..++.||+.||.|||+.||+||||+|+||+++. ++.++|+|||++..
T Consensus 75 ~v~e~~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~--~~~~~l~d~g~~~~ 147 (282)
T cd07829 75 LVFEYCDMDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINR--DGVLKLADFGLARA 147 (282)
T ss_pred EEecCcCcCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcC--CCCEEEecCCcccc
Confidence 999999999988887643 12889999999999999999999999999999999999995 67899999999875
Q ss_pred cCCC---cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1028 ETDH---LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1028 ~~~~---~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
.... ......+..|+|||.+.+. .++.++|+|||||++|+|++|++||.+.+....+.++...++.+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T cd07829 148 FGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVT 227 (282)
T ss_pred cCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhc
Confidence 4332 2234557789999999876 78999999999999999999999999999888899988888766655544332
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
... .+... +............+..+..+.+||++||..||.+||++.+++.||||
T Consensus 228 ~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 228 KLP-DYKPT--------------FPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred ccc-ccccc--------------ccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 211 00000 00000111122234457899999999999999999999999999998
No 171
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-36 Score=318.87 Aligned_cols=252 Identities=29% Similarity=0.412 Sum_probs=208.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||++++..+++.||+|++.... .....+.+|+.+++.+.| +||++++++|.....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~ 74 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS------PYITKYYGSFLKGSKL 74 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC------CCeeeeeEEEEECCeE
Confidence 47889999999999999999999999999999997643 334566788888888864 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+|+||+.+ +|.+++... .+++..++.++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~ 145 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE--EGDVKLADFGVS 145 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999986 677666533 3889999999999999999999999999999999999995 778999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||++.+..++.++|||||||++|+|++|.+||...++......+.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---------- 215 (274)
T cd06609 146 GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP---------- 215 (274)
T ss_pred eeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC----------
Confidence 765432 3345778899999999998899999999999999999999999987665544433321000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
+. + ....++..+.+||.+||..+|.+|||+.++++||||+..-
T Consensus 216 ---------------------------~~---~--~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~ 258 (274)
T cd06609 216 ---------------------------PS---L--EGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK 258 (274)
T ss_pred ---------------------------CC---C--cccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCC
Confidence 00 0 0011467899999999999999999999999999998753
No 172
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.2e-36 Score=321.65 Aligned_cols=255 Identities=30% Similarity=0.469 Sum_probs=206.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.++|++++.||.|+||.||++.+..++..+|+|++.... .....+..|+.+++.++|+ ||++++++|.....+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~ 77 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHP------NIVGLYEAYFYENKL 77 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCC------ceeEEEEEEecCCeE
Confidence 367999999999999999999998899999999997543 3345677889998888654 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+++ +|..++..... .+++..++.++.||+.||.|||+.+|+|+||||+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~--~~~~~l~d~g~~ 150 (280)
T cd06611 78 WILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL--DGDVKLADFGVS 150 (280)
T ss_pred EEEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECC--CCCEEEccCccc
Confidence 999999997 55555543221 3889999999999999999999999999999999999984 678999999988
Q ss_pred cccCC---CcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1026 CFETD---HLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1026 ~~~~~---~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
..... ......+++.|+|||++. ...++.++|+|||||++|+|++|++||...+....+.++.... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~--- 225 (280)
T cd06611 151 AKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSE--P--- 225 (280)
T ss_pred hhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCC--C---
Confidence 65432 223456889999999985 3457889999999999999999999998876655544442100 0
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+. .......+..+.+||.+||+.+|.+||++.++|+||||...
T Consensus 226 --------------------------------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 226 --------------------------------PT----LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred --------------------------------CC----cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 00 00112346789999999999999999999999999999876
No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.8e-36 Score=323.00 Aligned_cols=253 Identities=26% Similarity=0.423 Sum_probs=205.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..+|++.+.||.|+||.||++++..+++.||+|.+.... .....+..|+.+++.+.| +||+++++.|....++
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h------~~v~~~~~~~~~~~~~ 92 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN------PNIVNYLDSYLVGDEL 92 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC------CCEeeEEEEEEeCCEE
Confidence 368999999999999999999999999999999987643 234566778888887754 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++... .++...+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++
T Consensus 93 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~--~~~~kl~dfg~~ 163 (296)
T cd06654 93 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 163 (296)
T ss_pred EEeecccCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC--CCCEEECccccc
Confidence 999999985 566665421 2778899999999999999999999999999999999984 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|++||...++...+..+... +.
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~--------- 233 (296)
T cd06654 164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GT--------- 233 (296)
T ss_pred hhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CC---------
Confidence 654322 23357889999999999988999999999999999999999999877654433222100 00
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+. ......++..+.+||.+||..+|.+|||+.++|+||||...
T Consensus 234 ---------------------------~~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 234 ---------------------------PE----LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred ---------------------------CC----CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 00 00012345789999999999999999999999999999865
No 174
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.9e-36 Score=328.62 Aligned_cols=284 Identities=31% Similarity=0.509 Sum_probs=220.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCC--CcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHT--GMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~T--Gr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
+|++.+.||.|+||.||++.+..+ +..||||++... .........|+.+++.+. .|+||+++++.+...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~ 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-----GHKNITCLYDMDIVFP 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-----CCCChheeeeeeeecc
Confidence 589999999999999999999888 999999998753 222445678888888874 245999999875432
Q ss_pred ---CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 ---EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 ---e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
..+|++|+++.++|..++.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+
T Consensus 76 ~~~~~~~~~~e~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~--~~~~kl~ 147 (332)
T cd07857 76 GNFNELYLYEELMEADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNA--DCELKIC 147 (332)
T ss_pred ccCCcEEEEEecccCCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcC--CCCEEeC
Confidence 5689999999999888876432 2889999999999999999999999999999999999985 6789999
Q ss_pred cCCCccccCCC-------cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETDH-------LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~~-------~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++...... .....+++.|+|||++.+ ..++.++|||||||++|+|++|.+||...+....+.+++..+|
T Consensus 148 Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 227 (332)
T cd07857 148 DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227 (332)
T ss_pred cCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC
Confidence 99998754321 223468899999998876 4689999999999999999999999999998999999999988
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
.++..++........ ..... .........+....+..+..+.+||.+||++||.+|||+.+||.|||
T Consensus 228 ~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 228 TPDEETLSRIGSPKA------QNYIR-------SLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred CCCHHHHHhhhhhhH------HHHHH-------hccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 777655433211100 00000 00000011112223445789999999999999999999999999999
Q ss_pred CCCCCCC
Q 001034 1173 LSHPYEP 1179 (1182)
Q Consensus 1173 Fk~~~eP 1179 (1182)
|..-..|
T Consensus 295 ~~~~~~~ 301 (332)
T cd07857 295 LAIWHDP 301 (332)
T ss_pred hhhhcCc
Confidence 9754433
No 175
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.8e-36 Score=318.00 Aligned_cols=257 Identities=28% Similarity=0.425 Sum_probs=201.5
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE-----
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY----- 941 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq----- 941 (1182)
..++|++++.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.+. .|+||+++++++.
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-----DHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-----cCCCeeeeeeeeeecccC
Confidence 568999999999999999999999999999999998765444456778888888884 2459999999884
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
....+|+||||+.+ +|.+++...... ...+++..++.++.||+.||.|||+.+|+||||||+||+++. .+.++|+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~kl~ 166 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTT--EGGVKLV 166 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECC--CCCEEEc
Confidence 34579999999985 566665432211 123788899999999999999999999999999999999995 6679999
Q ss_pred cCCCccccCC---CcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETD---HLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~---~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++..... ......+++.|+|||++. +..++.++|||||||++|+|++|+.||....+...+..+...
T Consensus 167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-- 244 (286)
T cd06638 167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-- 244 (286)
T ss_pred cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--
Confidence 9999875432 223456899999999985 345889999999999999999999999776543332221100
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
. .+. .......+..+.+||.+||+.||.+|||+.+||+|||
T Consensus 245 ~-----------------------------------~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 245 P-----------------------------------PPT----LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred C-----------------------------------CCc----ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 0 000 0001123578999999999999999999999999999
Q ss_pred C
Q 001034 1173 L 1173 (1182)
Q Consensus 1173 F 1173 (1182)
|
T Consensus 286 ~ 286 (286)
T cd06638 286 I 286 (286)
T ss_pred C
Confidence 7
No 176
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.7e-36 Score=316.42 Aligned_cols=253 Identities=25% Similarity=0.431 Sum_probs=201.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
+|++.+.||+|+||.||++.+..+++.||+|++.... .....+..|+++++.++|+ ||++++++|..
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~iv~~~~~~~~ 74 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHP------HIIRMLGATCE 74 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCC------ceehhhceecc
Confidence 4788899999999999999999999999999997533 1345677888999888654 89999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..++++||||+.+ +|.+++.... .+++..+..++.||+.||.|||++|++|+||+|+||+++. ....++|+|
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~-~~~~~~l~d 147 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS-TGQRLRIAD 147 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEcc
Confidence 9999999999996 5666665332 2788999999999999999999999999999999999974 233699999
Q ss_pred CCCccccCCC-------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1022 LGSSCFETDH-------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1022 FGLA~~~~~~-------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
||++...... .....++..|+|||++.+..++.++|+|||||++|+|++|..||...........+....-
T Consensus 148 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-- 225 (268)
T cd06630 148 FGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIAS-- 225 (268)
T ss_pred cccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhc--
Confidence 9998654332 1234678899999999988999999999999999999999999975443222222210000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
...........+..+.+||.+||..+|.+|||+.++|+||||+
T Consensus 226 -------------------------------------~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 226 -------------------------------------ATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred -------------------------------------cCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 0000011123468899999999999999999999999999995
No 177
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=3.7e-36 Score=314.43 Aligned_cols=247 Identities=28% Similarity=0.418 Sum_probs=200.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
+|.+...||.|+||.||+|.+..+++.||+|.+.... .....+..|+.+++.+.| |||++++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~ 74 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH------ENIVQYLGS 74 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC------CCeeeEEEE
Confidence 4778899999999999999999999999999886532 122456678888888854 489999999
Q ss_pred EEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 940 FYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
+....++++||||+++ +|..++.... .+++..+..++.||+.||.|||++|++||||+|+|||++. ++.++
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~--~~~~~ 146 (267)
T cd06628 75 SLDADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN--KGGIK 146 (267)
T ss_pred EEeCCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC--CCCEE
Confidence 9999999999999986 6666665432 2788899999999999999999999999999999999984 67799
Q ss_pred EecCCCccccCCC---------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 001034 1019 VIDLGSSCFETDH---------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIG 1089 (1182)
Q Consensus 1019 LiDFGLA~~~~~~---------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ 1089 (1182)
|+|||++...... .....++..|+|||++.+..++.++|+|||||++|+|++|+.||...+....+.++..
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 226 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE 226 (267)
T ss_pred ecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc
Confidence 9999998754321 1134578899999999998899999999999999999999999987654433333211
Q ss_pred hcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1090 IIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1090 ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ..+ ......+..+.+||++||+.||.+||++.++++
T Consensus 227 ~-------------------------------------~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 227 N-------------------------------------ASP------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred c-------------------------------------CCC------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0 000 011234688999999999999999999999999
Q ss_pred CCCC
Q 001034 1170 HPWL 1173 (1182)
Q Consensus 1170 HPWF 1173 (1182)
||||
T Consensus 264 ~~~~ 267 (267)
T cd06628 264 HPFL 267 (267)
T ss_pred CCCC
Confidence 9998
No 178
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.1e-36 Score=310.45 Aligned_cols=249 Identities=27% Similarity=0.426 Sum_probs=208.9
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++++.||.|+||.||++++..+++.+++|.+... ......+.+|+.+++.++| +||++++++|.....+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~ 74 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH------PNIIAYYNHFMDDNTL 74 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC------CCeeEEEeEEecCCeE
Confidence 599999999999999999999999999999998653 2334567789999998854 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++||||+.+ +|.+++.... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. ++.+||+|||++
T Consensus 75 ~~~~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~--~~~~kl~d~~~~ 148 (256)
T cd08221 75 LIEMEYANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK--AGLIKLGDFGIS 148 (256)
T ss_pred EEEEEecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeC--CCCEEECcCcce
Confidence 999999985 7887776542 123788999999999999999999999999999999999984 677999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+.+..+.. +.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~------- 219 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYT------- 219 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCC-------
Confidence 754332 2345789999999999988899999999999999999999999988777666665531 0000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
......+..+.+||.+||+.+|.+||++.++|+||||
T Consensus 220 ----------------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 220 ----------------------------------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred ----------------------------------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0012346789999999999999999999999999997
No 179
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-36 Score=322.79 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=205.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++++.||.|+||.||+|.+..+++.||+|.++.. ......+.+|+.+++.+.| +||+++++.|.....+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS------PYIVDFYGAFFIEGAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC------CcHHhhhhheecCCeE
Confidence 3689999999999999999999999999999998753 2334567788899888765 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
|+||||+++ +|..++..... ...+++..+..++.||+.||.|||+ .+|+|+||||+|||++. ++.++|+|||+
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~dfg~ 149 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNG--NGQVKLCDFGV 149 (286)
T ss_pred EEEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECC--CCCEEEeecCC
Confidence 999999997 45555443211 1238999999999999999999996 69999999999999995 67899999999
Q ss_pred ccccCC-CcccccCCCcccchhhhcCC------CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1025 SCFETD-HLCSYVQSRSYRAPEVILGL------SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1025 A~~~~~-~~ss~vGTp~YmAPEVLlg~------~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
+..... ......+++.|+|||++.+. .++.++|+|||||++|+|++|+.||........+..+..+....+
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-- 227 (286)
T cd06622 150 SGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP-- 227 (286)
T ss_pred cccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC--
Confidence 865432 23345678899999998654 358899999999999999999999976554443333321111000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
....+.++.++.+||.+||+.+|.+||++.+++.||||....
T Consensus 228 --------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 228 --------------------------------------PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred --------------------------------------CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 001123578899999999999999999999999999997664
Q ss_pred CC
Q 001034 1178 EP 1179 (1182)
Q Consensus 1178 eP 1179 (1182)
.+
T Consensus 270 ~~ 271 (286)
T cd06622 270 NA 271 (286)
T ss_pred CC
Confidence 43
No 180
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.3e-36 Score=318.60 Aligned_cols=252 Identities=25% Similarity=0.396 Sum_probs=200.4
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.++|.+.+.||.|+||.||+|++..+++.||+|+++... .....+.+|+.+++.+.| |||+++++++.....+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h------~~ii~~~~~~~~~~~~ 81 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH------SNIVAYFGSYLRRDKL 81 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC------CCeeeEEEEEEeCCEE
Confidence 357888899999999999999999999999999997653 223456678888887754 5899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+++ +|.+++.... .+++..++.++.||+.||.|||+.||+|+||||+|||++. ++.++|+|||++
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~--~~~~~l~dfg~~ 153 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTD--NGHVKLADFGVS 153 (267)
T ss_pred EEEEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEECcceee
Confidence 999999985 6777665432 2889999999999999999999999999999999999984 677999999998
Q ss_pred cccCCC---cccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
...... .....+++.|+|||++. ...++.++|+|||||++|+|++|.+||....+...+..+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~-------- 225 (267)
T cd06645 154 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN-------- 225 (267)
T ss_pred eEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccC--------
Confidence 654332 23457899999999985 4568899999999999999999999997655433222221000
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
...+.. .....++..+.+||.+||..+|++|||+.+||+|||
T Consensus 226 ---------------------------~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 226 ---------------------------FQPPKL----KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred ---------------------------CCCCcc----cccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 000000 001134678999999999999999999999999999
No 181
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.9e-36 Score=319.57 Aligned_cols=254 Identities=28% Similarity=0.454 Sum_probs=203.5
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
|++++.||.|+||.||++.+..++..+++|.+.... .....+..|+.+++.+.| +||++++++|......|+|
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~ii~~~~~~~~~~~~~~v 80 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH------PNIVKLLDAFYYENNLWIL 80 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC------CCeeeEEEEEeeCCEEEEE
Confidence 678889999999999999999999999999997543 344567778888888754 4899999999999999999
Q ss_pred EEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 950 CELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 950 mEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
|||+.++.+..+..... ..+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~--~~~~kl~dfg~~~~~~ 154 (282)
T cd06643 81 IEFCAGGAVDAVMLELE----RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL--DGDIKLADFGVSAKNT 154 (282)
T ss_pred EEecCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcc--CCCEEEcccccccccc
Confidence 99999765544322211 13888999999999999999999999999999999999984 6779999999986543
Q ss_pred CC---cccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1030 DH---LCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1030 ~~---~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
.. .....+++.|+|||++. +..++.++|||||||++|+|++|.+||...+....+..+.....+.
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~------- 227 (282)
T cd06643 155 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT------- 227 (282)
T ss_pred ccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCC-------
Confidence 22 23456889999999984 4457889999999999999999999998877655554443111100
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
. .....++..+.+||.+||..||.+||++.++|+||||+...
T Consensus 228 ---------------------------~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 269 (282)
T cd06643 228 ---------------------------L-------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS 269 (282)
T ss_pred ---------------------------C-------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence 0 00112467899999999999999999999999999998653
No 182
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.7e-36 Score=331.19 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=194.6
Q ss_pred cCCEEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHD-----LHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkD-----k~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++.+.||.|+||.||+|.+ ..+++.||||+++... .....+..|+.++..+. .||||++++++|
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~ 80 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-----NHLNVVNLLGAC 80 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-----cCcceeeEEeEe
Confidence 46899999999999999999975 3456789999997542 23456788999998884 245999999988
Q ss_pred Eec-CeEEEEEEecc-cChHHHHhhhcccC--------------------------------------------------
Q 001034 941 YYR-EHLLIVCELLK-ANLYEFHKFNRESG-------------------------------------------------- 968 (1182)
Q Consensus 941 qd~-e~LyLVmEyL~-GsLld~Lk~~~~sg-------------------------------------------------- 968 (1182)
... ..+|+||||+. |+|.+++.......
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 765 46899999998 46777776432100
Q ss_pred ------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC-----cccccC
Q 001034 969 ------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQ 1037 (1182)
Q Consensus 969 ------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vG 1037 (1182)
....+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||+++..... .....+
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~--~~~~kl~DfG~a~~~~~~~~~~~~~~~~~ 238 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGSARL 238 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcC--CCcEEEeecccccccccCcchhcccCCCC
Confidence 0123778888999999999999999999999999999999984 678999999998754321 122345
Q ss_pred CCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhh
Q 001034 1038 SRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLY 1116 (1182)
Q Consensus 1038 Tp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~ 1116 (1182)
++.|+|||++.+..++.++|||||||+||+|++ |..||.+......+...+.. +.
T Consensus 239 ~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~----------------------- 294 (338)
T cd05102 239 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GT----------------------- 294 (338)
T ss_pred CccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CC-----------------------
Confidence 678999999999999999999999999999997 99999875433222221100 00
Q ss_pred hhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1117 ERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1117 er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
........+..+.+||.+||+.||.+|||+.+|++
T Consensus 295 ------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 295 ------------------RMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred ------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 00011234678999999999999999999999986
No 183
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.2e-36 Score=316.85 Aligned_cols=253 Identities=27% Similarity=0.390 Sum_probs=200.1
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
...+|++.+.||+|+||.||+|.++.+++.||+|++.... .....+..|+.+++.+.| +||++++++|.....
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h------~~ii~~~~~~~~~~~ 80 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKH------CNIVAYFGSYLSREK 80 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCC------CCeeeeeEEEEeCCE
Confidence 3467999999999999999999999999999999997542 334456678888887754 489999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+++ +|.+++.... .+++..+..++.||+.||.|||+.+|+||||+|+||+++. ++.++|+|||+
T Consensus 81 ~~iv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~--~~~~~l~dfg~ 152 (267)
T cd06646 81 LWICMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTD--NGDVKLADFGV 152 (267)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC--CCCEEECcCcc
Confidence 9999999985 5666665332 2788999999999999999999999999999999999984 67799999999
Q ss_pred ccccCCC---cccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1025 SCFETDH---LCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~~---~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
+...... .....+++.|+|||.+. ...++.++|+|||||++|+|++|+.||....+......+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~-------- 224 (267)
T cd06646 153 AAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS-------- 224 (267)
T ss_pred ceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecC--------
Confidence 8754322 23456888999999985 345788999999999999999999999655433222111000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
....+.. ......+..+.+||++||..+|.+|||+.+||+|+|
T Consensus 225 ---------------------------~~~~~~~----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 225 ---------------------------NFQPPKL----KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ---------------------------CCCCCCC----ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 0000000 011234688999999999999999999999999998
No 184
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.6e-36 Score=314.06 Aligned_cols=248 Identities=24% Similarity=0.351 Sum_probs=199.2
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
+|++.+.||.|+||+||+|.+ .+++.+|+|.+.... .....+.+|+.+++.++|. ||++++++|..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHV------NIVQYLGTCLD 73 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCC------CEeeEeeEeec
Confidence 478889999999999999986 588999999987432 2234566788888887654 89999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
...+|+||||+.+ +|.+++.... .+++..++.++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l~d 145 (265)
T cd06631 74 DNTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMP--NGIIKLID 145 (265)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECC--CCeEEecc
Confidence 9999999999986 6666665432 2788899999999999999999999999999999999984 67899999
Q ss_pred CCCccccCC---------CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1022 LGSSCFETD---------HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1022 FGLA~~~~~---------~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
||++..... ......++..|+|||++.+..++.++|+|||||++|+|++|..||...+.......+....+
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 225 (265)
T cd06631 146 FGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG 225 (265)
T ss_pred chhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC
Confidence 998864321 12245678899999999998999999999999999999999999976554433322211000
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
. .+ .....++..+.+||++||..+|.+||++.++|+|||
T Consensus 226 ~-----------------------------------~~------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 226 L-----------------------------------MP------RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred C-----------------------------------CC------CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 0 00 011235788999999999999999999999999999
Q ss_pred C
Q 001034 1173 L 1173 (1182)
Q Consensus 1173 F 1173 (1182)
|
T Consensus 265 ~ 265 (265)
T cd06631 265 L 265 (265)
T ss_pred C
Confidence 8
No 185
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.7e-36 Score=309.27 Aligned_cols=250 Identities=24% Similarity=0.368 Sum_probs=206.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++.+.||.|+||.||+|.+..+++.+|+|.+.... .....+..|+.+++.++| ++|+++++.+.....+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~ 74 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH------PNIIEYYENFLEDKAL 74 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC------CchhheeeeEecCCEE
Confidence 5899999999999999999999999999999987542 334567788888888854 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++||||+.+ +|.+++..... ..+++..+..++.||+.||.|||++||+|+||+|+||+++. ..+.+||+|||++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (256)
T cd08220 75 MIVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK-HKMVVKIGDFGIS 149 (256)
T ss_pred EEEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC-CCCEEEEccCCCc
Confidence 999999986 67777754321 23788899999999999999999999999999999999984 3456899999998
Q ss_pred cccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1026 CFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1026 ~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
...... .....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd08220 150 KILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF----------- 218 (256)
T ss_pred eecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC-----------
Confidence 765433 2235678899999999988899999999999999999999999987766555444421000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.......+..+.+||.+||..+|.+|||+.+||+||||
T Consensus 219 --------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 219 --------------------------------APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred --------------------------------CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 00112346789999999999999999999999999997
No 186
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.6e-36 Score=310.72 Aligned_cols=249 Identities=24% Similarity=0.418 Sum_probs=205.9
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++.+.||.|+||.||++.+..+++.||+|.+... ......+.+|+.+++.+.| +||++++++|....+.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~ 74 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH------PNIVQYQESFEENGNL 74 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC------CCeeeeEeeecCCCeE
Confidence 589999999999999999999999999999998753 2334567788888888865 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+++++|+||+|+|||++. ++.++|+|||++
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~--~~~~~l~d~~~~ 148 (256)
T cd08218 75 YIVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK--DGTIKLGDFGIA 148 (256)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEEeeccce
Confidence 999999985 67776654321 23788899999999999999999999999999999999984 667999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+.+..++. +..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~------- 219 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYP------- 219 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCC-------
Confidence 754332 1234578889999999998999999999999999999999999987776665555421 0000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
......+..+.+||.+||+.+|.+||++.++|+||||
T Consensus 220 ----------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 220 ----------------------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ----------------------------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 0112346789999999999999999999999999998
No 187
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.3e-36 Score=320.30 Aligned_cols=276 Identities=34% Similarity=0.540 Sum_probs=217.3
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchh--hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF--FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~--~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
|++.+.||.|+||+||+|+...+++.||||.+...... .....+|+..++.+. .|++|++++++|......|+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHPNIVKLKEVFRENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-----CCCCchhHHHHhhcCCcEEE
Confidence 67889999999999999999999999999998754321 123345777776664 25589999999999999999
Q ss_pred EEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 949 VCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 949 VmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
||||+.+++++++..... ..+++..+..++.||+.||.|||+++++|+||+|+||+++. .+.++|+|||++...
T Consensus 76 v~e~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~--~~~~~l~d~~~~~~~ 149 (283)
T cd07830 76 VFEYMEGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSG--PEVVKIADFGLAREI 149 (283)
T ss_pred EEecCCCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcC--CCCEEEeecccceec
Confidence 999998899888775431 23789999999999999999999999999999999999994 778999999998765
Q ss_pred CCC--cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 TDH--LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~~~--~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
... .....++..|+|||++.. ..++.++|+||||+++|+|++|++||......+.+.++...++.+....+......
T Consensus 150 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred cCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 432 234567889999998854 45889999999999999999999999999888888888888887765544332211
Q ss_pred chhhcccchhhhhhcchhhhhhccccc--cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKK--TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~--~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...+ ....+.. ..+....+..+..+++||++||+.+|.+|||+.|++.||||
T Consensus 230 ~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 230 ASKL----------------GFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hccc----------------cccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 1100 0011111 01112223346889999999999999999999999999998
No 188
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=7.5e-36 Score=308.25 Aligned_cols=251 Identities=27% Similarity=0.420 Sum_probs=204.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe--cC
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY--RE 944 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd--~e 944 (1182)
+|++++.||.|+||.||+|.+..+++.||+|++... ......+..|+.+++.+.|+ ||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHP------NIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCC------ccceeeeeeecCCCC
Confidence 589999999999999999999999999999998753 23345667788888888654 89999998864 35
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHH-----hcCccccccCCccEEEccCCCceEE
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLH-----GLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLH-----S~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
.+|+||||+.+ +|..++...... ...+++..++.++.||+.||.||| +.+++|+||+|+||+++. .+.+|
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~--~~~~k 150 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKE--RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDA--NNNVK 150 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEec--CCCEE
Confidence 68999999985 677777654322 223888999999999999999999 899999999999999994 67899
Q ss_pred EecCCCccccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1019 VIDLGSSCFETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1019 LiDFGLA~~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
|+|||++....... ....+++.|+|||++.+..++.++|+||||+++|+|++|+.||...+...+...+....
T Consensus 151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---- 226 (265)
T cd08217 151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGK---- 226 (265)
T ss_pred EecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCC----
Confidence 99999987654322 34568999999999999889999999999999999999999998876554443331000
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
........+..+.+||.+||+.+|.+|||+.+||+|||+
T Consensus 227 ---------------------------------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 227 ---------------------------------------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred ---------------------------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 000112346789999999999999999999999999996
No 189
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-36 Score=323.84 Aligned_cols=254 Identities=27% Similarity=0.431 Sum_probs=204.1
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..+|++++.||.|+||.||++++..+++.||+|.+.... .....+..|+.+++.+.| +||++++++|....++
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~ 91 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN------PNIVNYLDSYLVGDEL 91 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC------CCEeeEEEEEecCCEE
Confidence 478999999999999999999999999999999997543 233456678888887654 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+++ +|..++... .+++..+..++.|++.||.|||+.||+||||||+|||++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~--~~~~~l~Dfg~~ 162 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (297)
T ss_pred EEeecccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEECcCccc
Confidence 999999986 566655421 2788899999999999999999999999999999999984 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|++||...++...+..+.. .+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~--------- 232 (297)
T cd06656 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGT--------- 232 (297)
T ss_pred eEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCC---------
Confidence 654322 2245678899999999999999999999999999999999999977554322111100 000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
+. .......+..+.+||.+||..+|.+||++.++|+||||....
T Consensus 233 ---------------------------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 233 ---------------------------PE----LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred ---------------------------CC----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 00 001123467889999999999999999999999999998653
No 190
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.7e-36 Score=309.44 Aligned_cols=253 Identities=30% Similarity=0.431 Sum_probs=204.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.++|++.+.||.|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.++| |||+++++++.....+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~ 75 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH------PNIVAYFGSYLRRDKL 75 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC------CChhceEEEEEeCCEE
Confidence 367999999999999999999999999999999998653 234667788888888755 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|..++..... .+++..+..++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|||++
T Consensus 76 ~l~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~ 148 (262)
T cd06613 76 WIVMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE--DGDVKLADFGVS 148 (262)
T ss_pred EEEEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC--CCCEEECccccc
Confidence 999999996 56655554321 2889999999999999999999999999999999999994 677999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGL---SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~---~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
...... .....++..|+|||.+.+. .++.++|+|||||++|+|++|.+||...++......+...-.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~----- 223 (262)
T cd06613 149 AQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPP----- 223 (262)
T ss_pred hhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCC-----
Confidence 754432 2345678899999999877 88999999999999999999999998776555443331100000
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
+. .......+..+.+||++||..+|..|||+.+++.|||
T Consensus 224 ------------------------------~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 224 ------------------------------PK----LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ------------------------------cc----ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 00 0001123577999999999999999999999999999
No 191
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.3e-36 Score=321.67 Aligned_cols=252 Identities=29% Similarity=0.444 Sum_probs=205.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.+|++.+.||.|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.+.| +||++++++|.....+|
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~ 92 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKN------PNIVNFLDSFLVGDELF 92 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCC------CceeeeeeeEecCceEE
Confidence 57999999999999999999999999999999987543 234566778888888754 48999999999999999
Q ss_pred EEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+.++ |..++.. . .+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|+|||++.
T Consensus 93 lv~e~~~~~~L~~~~~~-~------~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~--~~~~kl~dfg~~~ 163 (296)
T cd06655 93 VVMEYLAGGSLTDVVTE-T------CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM--DGSVKLTDFGFCA 163 (296)
T ss_pred EEEEecCCCcHHHHHHh-c------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccCccch
Confidence 999999865 4444432 1 2788999999999999999999999999999999999984 6789999999886
Q ss_pred ccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||...+....+..+... +. +
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~-~-------- 233 (296)
T cd06655 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GT-P-------- 233 (296)
T ss_pred hcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CC-c--------
Confidence 54322 23356788999999999988999999999999999999999999887765544333210 00 0
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.......++..+.+||++||..||.+|||+.++++||||+..
T Consensus 234 -------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 234 -------------------------------ELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred -------------------------------ccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 000112346789999999999999999999999999999854
No 192
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-38 Score=355.96 Aligned_cols=250 Identities=30% Similarity=0.427 Sum_probs=213.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..|..++.||+|+||.||+|.+..+++.||+|++..+ ......+.+|+.+|..+.+. ||.++|+.|..+..+
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~------~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSP------NITEYYGSYLKGTKL 86 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcc------hHHhhhhheeecccH
Confidence 4578889999999999999999999999999999865 35567888999999998764 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|+|||+.| +++++++.... +.+..+..++++++.||.|||..+.+|||||+.|||+.. .|.+||+|||.+
T Consensus 87 wiiMey~~gGsv~~lL~~~~~------~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~--~g~vkl~DfgVa 158 (467)
T KOG0201|consen 87 WIIMEYCGGGSVLDLLKSGNI------LDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE--SGDVKLADFGVA 158 (467)
T ss_pred HHHHHHhcCcchhhhhccCCC------CccceeeeehHHHHHHhhhhhhcceecccccccceeEec--cCcEEEEeccee
Confidence 999999995 57777664432 578888899999999999999999999999999999995 588999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... ..+++|||.|||||++.+..|+.++||||||++.+||++|.+||....+...+
T Consensus 159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------------------ 220 (467)
T KOG0201|consen 159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------------------ 220 (467)
T ss_pred eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------------------
Confidence 765432 36789999999999999989999999999999999999999999776653222
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
+.||+...-. .....+..|++||..||.+||+.||+|.+||+|+|++.
T Consensus 221 ------------------------flIpk~~PP~-L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 221 ------------------------FLIPKSAPPR-LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred ------------------------EeccCCCCCc-cccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 2233332211 11256788999999999999999999999999999987
No 193
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.6e-36 Score=371.74 Aligned_cols=266 Identities=26% Similarity=0.365 Sum_probs=210.8
Q ss_pred eCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 863 LNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 863 ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
.+..+.++|++++.||.|+||+||+|+++.++..||+|++... ......+..|+.+|+.|.|+ |||+++++
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HP------NIVrl~d~ 80 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHK------NIVRYIDR 80 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCC------CcCeEEEE
Confidence 4566778999999999999999999999999999999998753 23455678899999998654 89999999
Q ss_pred EEec--CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc-------CccccccCCccEEE
Q 001034 940 FYYR--EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL-------GLIHCDLKPENILV 1009 (1182)
Q Consensus 940 Fqd~--e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~-------GIIHRDIKPeNILI 1009 (1182)
|... ..+||||||+.+ +|..++....... ..+++..++.|+.||+.||.|||+. +||||||||+||||
T Consensus 81 f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~--g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 81 FLNKANQKLYILMEFCDAGDLSRNIQKCYKMF--GKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEecCCCEEEEEEeCCCCCcHHHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 8654 579999999985 7777776543221 2389999999999999999999985 49999999999999
Q ss_pred ccC---------------CCceEEEecCCCccccCCC--cccccCCCcccchhhhcC--CCCCchhhHHHHHHHHHHHHh
Q 001034 1010 KSY---------------SRCEVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILG--LSYDKKIDIWSLGCILAELCT 1070 (1182)
Q Consensus 1010 Ds~---------------~dG~IKLiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg--~~yS~kSDIWSLGVILYELLT 1070 (1182)
+.. ....+||+|||++...... ....++|+.|+|||++.+ ..++.++||||||||||+|++
T Consensus 159 ~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 159 STGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred ecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 641 2345899999998764322 234578999999999965 458899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHH
Q 001034 1071 GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFV 1150 (1182)
Q Consensus 1071 Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLI 1150 (1182)
|..||...+....+..++... |. ......+..+.+||
T Consensus 239 Gk~PF~~~~~~~qli~~lk~~--------------------------------------p~-----lpi~~~S~eL~dLI 275 (1021)
T PTZ00266 239 GKTPFHKANNFSQLISELKRG--------------------------------------PD-----LPIKGKSKELNILI 275 (1021)
T ss_pred CCCCCCcCCcHHHHHHHHhcC--------------------------------------CC-----CCcCCCCHHHHHHH
Confidence 999997654433222221000 00 01123467899999
Q ss_pred HHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1151 AHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1151 rkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
..||.++|.+||++.++|.||||+....|
T Consensus 276 ~~~L~~dPeeRPSa~QlL~h~~ik~i~~p 304 (1021)
T PTZ00266 276 KNLLNLSAKERPSALQCLGYQIIKNVGPP 304 (1021)
T ss_pred HHHhcCChhHCcCHHHHhccHHHhhcCCC
Confidence 99999999999999999999999877655
No 194
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.3e-35 Score=306.79 Aligned_cols=248 Identities=28% Similarity=0.389 Sum_probs=201.9
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+|+..+.||.|+||.||+|.+..+++.||+|.+.... .....+..|+.+++.+.|+ +|+++++++...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~------~i~~~~~~~~~~ 74 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHP------NIVQYLGTEREE 74 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCC------CchheeeeEecC
Confidence 5778899999999999999998899999999987543 2445677888888887654 899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+|+||||+++ +|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. ++.+||+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~--~~~~kl~d~ 146 (258)
T cd06632 75 DNLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT--NGVVKLADF 146 (258)
T ss_pred CeEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEccC
Confidence 999999999986 6776665432 2788899999999999999999999999999999999984 678999999
Q ss_pred CCccccCCC--cccccCCCcccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1023 GSSCFETDH--LCSYVQSRSYRAPEVILGLS-YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1023 GLA~~~~~~--~ss~vGTp~YmAPEVLlg~~-yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
|++...... .....+++.|+|||.+.... ++.++|+|||||++|+|++|.+||..........++...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~--------- 217 (258)
T cd06632 147 GMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS--------- 217 (258)
T ss_pred ccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc---------
Confidence 998754332 23456889999999998776 899999999999999999999999765543333222100
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.........++..+.+||++||+.+|.+||++.++|.||||
T Consensus 218 ---------------------------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 218 ---------------------------------KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ---------------------------------ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 00001122356889999999999999999999999999997
No 195
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.9e-35 Score=318.51 Aligned_cols=252 Identities=24% Similarity=0.360 Sum_probs=204.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
+.|++++.||.|+||.||++.+..+++.||+|.+.... .....+.+|+.+++.+.| |||+++++.|....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~ 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN------PFVVSMFCSFETKR 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC------CCeeeeEEEEecCC
Confidence 36899999999999999999999999999999987643 223456678888887654 59999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|+||||+.| +|..++.... .+++..+..++.||+.||.|||+.+++||||||.|||++. .+.++|+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~--~~~~~l~dfg 146 (305)
T cd05609 75 HLCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS--MGHIKLTDFG 146 (305)
T ss_pred EEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC--CCCEEEeeCC
Confidence 99999999986 5666664432 2788899999999999999999999999999999999984 6789999999
Q ss_pred CccccCCC------------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001034 1024 SSCFETDH------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLA 1085 (1182)
Q Consensus 1024 LA~~~~~~------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLa 1085 (1182)
++...... .....++..|+|||.+....++.++|+|||||++|+|++|..||.+....+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 87531100 012356788999999999899999999999999999999999998877766655
Q ss_pred HHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC--
Q 001034 1086 RVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-- 1163 (1182)
Q Consensus 1086 kIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-- 1163 (1182)
.+.......| . .....+..+.+||.+||+.||++||+
T Consensus 227 ~~~~~~~~~~-----------------------------------~------~~~~~~~~~~~li~~~l~~~P~~R~~~~ 265 (305)
T cd05609 227 QVISDDIEWP-----------------------------------E------GDEALPADAQDLISRLLRQNPLERLGTG 265 (305)
T ss_pred HHHhcccCCC-----------------------------------C------ccccCCHHHHHHHHHHhccChhhccCcc
Confidence 5431111000 0 01135678999999999999999998
Q ss_pred -HHHHHcCCCCCC
Q 001034 1164 -ASDALKHPWLSH 1175 (1182)
Q Consensus 1164 -AeELLqHPWFk~ 1175 (1182)
+.++|+||||..
T Consensus 266 ~~~~ll~~~~~~~ 278 (305)
T cd05609 266 GAFEVKQHRFFLG 278 (305)
T ss_pred CHHHHHhCccccC
Confidence 899999999954
No 196
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.2e-36 Score=313.84 Aligned_cols=252 Identities=30% Similarity=0.424 Sum_probs=203.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||+|.++.+++.+|+|.+.... .....+.+|+.+++.+. ||||+++++.+.....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN------SPYIVGFYGAFYNNGDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC------CCchhhhheeeecCCEE
Confidence 35788899999999999999999999999999987653 33456778888888775 44899999999999999
Q ss_pred EEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 947 LIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
|+||||+. ++|.+++.... ..+++..+..++.||+.||.|||+ .+++|+||||+||+++. ++.++|+|||.
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~--~~~~~l~d~g~ 147 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS--RGQIKLCDFGV 147 (265)
T ss_pred EEEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC--CCCEEEeeccc
Confidence 99999999 57777766542 238889999999999999999999 99999999999999995 67899999999
Q ss_pred ccccCCC-cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhhcCCcchhh
Q 001034 1025 SCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS-----PATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~~-~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d-----~~elLakIv~ilGp~Peem 1098 (1182)
+...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||.... ....+..++. .
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~----- 219 (265)
T cd06605 148 SGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---E----- 219 (265)
T ss_pred chhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---C-----
Confidence 8654322 122678889999999999999999999999999999999999997542 1122222210 0
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
..+.. .....+..+++||.+||..||.+|||+.+++.||||+.
T Consensus 220 -----------------------------~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 220 -----------------------------PPPRL-----PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred -----------------------------CCCCC-----ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 00000 00015788999999999999999999999999999964
No 197
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.7e-35 Score=306.86 Aligned_cols=251 Identities=30% Similarity=0.438 Sum_probs=207.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+.|++.+.||.|+||.||+|++..+++.||+|++.... .....+..|+.++..++| +||+++++++.....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~ 74 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES------PYVVKCYGAFYKEGEI 74 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC------CCeeeEEEEEccCCeE
Confidence 36899999999999999999999999999999997654 345677888888888864 4899999999999999
Q ss_pred EEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 947 LIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
|+||||+. ++|.+++.... .+++..+..++.||+.||.|||+ .+++|+||+|+||+++. ++.++|+|||+
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~--~~~~~l~df~~ 146 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS--KGEVKIADFGI 146 (264)
T ss_pred EEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC--CCCEEEccCcc
Confidence 99999999 56777766432 28899999999999999999999 99999999999999984 77899999999
Q ss_pred ccccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHHHHhhcCCcchhh
Q 001034 1025 SCFETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS---PATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d---~~elLakIv~ilGp~Peem 1098 (1182)
+....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ..+....+.. .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~----- 218 (264)
T cd06623 147 SKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---G----- 218 (264)
T ss_pred ceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---C-----
Confidence 87543322 24467889999999999899999999999999999999999997753 2222222210 0
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCC-CcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPM-GDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~-~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.. ...... ++..+.+||.+||..+|.+||++.++|+||||+..
T Consensus 219 -----------------------------~~------~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 219 -----------------------------PP------PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred -----------------------------CC------CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 00 001112 57899999999999999999999999999999764
No 198
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=9.5e-36 Score=310.84 Aligned_cols=248 Identities=25% Similarity=0.397 Sum_probs=195.3
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccchh----hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF----FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~----~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.||.|+||.||+|.+..+++.||||++++.... ......|..++... ..|+||++++++|.....+|+||
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~i~~~~~~~~~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQ-----GESPYVAKLYYSFQSKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhc-----CCCCCeeeeeeeEEcCCeEEEEE
Confidence 5689999999999999999999999999764321 11222333332221 25679999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.+ +|..++.... .+++..+..++.||+.||.|||+.+++|+||+|+|||++. ++.++|+|||++....
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l~dfg~~~~~~ 148 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQ--TGHLKLTDFGLSRNGL 148 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC--CCcEEEeecccceecc
Confidence 99986 6666665432 2788999999999999999999999999999999999985 6779999999987543
Q ss_pred CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhh
Q 001034 1030 DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYF 1109 (1182)
Q Consensus 1030 ~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F 1109 (1182)
. .....+++.|+|||.+.+..++.++||||||+++|+|++|.+||...+....+..+.......
T Consensus 149 ~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------- 212 (260)
T cd05611 149 E-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINW--------------- 212 (260)
T ss_pred c-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCC---------------
Confidence 3 234568889999999998889999999999999999999999998877666555542110000
Q ss_pred cccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH---HHHHcCCCCCCC
Q 001034 1110 TKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA---SDALKHPWLSHP 1176 (1182)
Q Consensus 1110 ~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA---eELLqHPWFk~~ 1176 (1182)
+. .....++..+.+||.+||+.+|.+||++ .|+|.||||+..
T Consensus 213 --------------------~~-----~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 213 --------------------PE-----EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred --------------------CC-----cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 00 0112357889999999999999999955 799999999764
No 199
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.1e-36 Score=313.39 Aligned_cols=248 Identities=24% Similarity=0.422 Sum_probs=205.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|.+.+.||.|+||.||++.+..+++.||+|++.+.. ........|+.+++.+. .|+||++++++|....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-----GHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-----cCCCchhHHHHhcCCc
Confidence 46999999999999999999999999999999997632 22345667788887775 2569999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+|+|||++. ++|.+++.... .+++..++.++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~--~~~~~l~df~ 147 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDK--DMHIKITDFG 147 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC--CCCEEecCCc
Confidence 9999999995 67877776542 3899999999999999999999999999999999999984 6779999999
Q ss_pred CccccCCCc-----------------------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Q 001034 1024 SSCFETDHL-----------------------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP 1080 (1182)
Q Consensus 1024 LA~~~~~~~-----------------------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~ 1080 (1182)
++....... ....++..|+|||++....++.++|+|||||++|+|++|+.||...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 986543321 234568899999999988899999999999999999999999988775
Q ss_pred HHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC
Q 001034 1081 ATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK 1160 (1182)
Q Consensus 1081 ~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek 1160 (1182)
...+..+...... .....+..+.+||.+||+.+|.+
T Consensus 228 ~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~li~~~l~~~p~~ 263 (280)
T cd05581 228 YLTFQKILKLEYS--------------------------------------------FPPNFPPDAKDLIEKLLVLDPQD 263 (280)
T ss_pred HHHHHHHHhcCCC--------------------------------------------CCCccCHHHHHHHHHHhcCCHhh
Confidence 5555444211100 01123678999999999999999
Q ss_pred CCCH----HHHHcCCCC
Q 001034 1161 RPSA----SDALKHPWL 1173 (1182)
Q Consensus 1161 RPTA----eELLqHPWF 1173 (1182)
||++ .+||+||||
T Consensus 264 R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 264 RLGVNEGYDELKAHPFF 280 (280)
T ss_pred CCCcccCHHHHhcCCCC
Confidence 9999 999999998
No 200
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.9e-35 Score=317.75 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=198.1
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECC----------------CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCC
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLH----------------TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPG 928 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~----------------TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l 928 (1182)
..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .....+.+|+.++..+.|
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h---- 78 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD---- 78 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC----
Confidence 35789999999999999999998532 34579999997642 334567789998888755
Q ss_pred CCcceEEEEEEEEecCeEEEEEEeccc-ChHHHHhhhcccC-------------CccccCHHHHHHHHHHHHHHHHHHHh
Q 001034 929 DKYHLLRLYDYFYYREHLLIVCELLKA-NLYEFHKFNRESG-------------GEVYFTMPRLQSITIQCLEALQFLHG 994 (1182)
Q Consensus 929 ~HPnIVkL~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sg-------------gel~Lse~eIr~Ia~QILsALeYLHS 994 (1182)
|||++++++|.....+|+||||+.+ +|.+++....... ....+++..+..++.||+.||.|||+
T Consensus 79 --~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 156 (304)
T cd05096 79 --PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS 156 (304)
T ss_pred --CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999985 6777765432110 11236778889999999999999999
Q ss_pred cCccccccCCccEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHH
Q 001034 995 LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELC 1069 (1182)
Q Consensus 995 ~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELL 1069 (1182)
.||+||||||+|||++. .+.+||+|||++...... .....++..|+|||++....++.++|||||||++|+|+
T Consensus 157 ~~ivH~dlkp~Nill~~--~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 157 LNFVHRDLATRNCLVGE--NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred CCccccCcchhheEEcC--CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHH
Confidence 99999999999999994 678999999998754322 12334578899999999989999999999999999998
Q ss_pred h--CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHH
Q 001034 1070 T--GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFI 1147 (1182)
Q Consensus 1070 T--Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~ 1147 (1182)
+ +..||...+..+.+..+...+-.... .......+.++..+.
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~ 278 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEFFRDQGR------------------------------------QVYLFRPPPCPQGLY 278 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHHhhhccc------------------------------------cccccCCCCCCHHHH
Confidence 6 56788877666555444211100000 000011234568899
Q ss_pred HHHHHhcccCCCCCCCHHHHHc
Q 001034 1148 DFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1148 DLIrkMLq~DPekRPTAeELLq 1169 (1182)
+||.+||+.||.+|||+.+|.+
T Consensus 279 ~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 279 ELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred HHHHHHccCCchhCcCHHHHHH
Confidence 9999999999999999999954
No 201
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-35 Score=310.47 Aligned_cols=244 Identities=26% Similarity=0.407 Sum_probs=200.1
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||.|+||.||+|.+..+++.||+|++.+.. .....+..|+.+++.+.| +||+++++.+.....+|+||||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~lv~e~ 74 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH------PFIVKLYRTFKDKKYIYMLMEY 74 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC------CCEeeeeeeEEcCCccEEEEec
Confidence 699999999999999999999999997643 334567778888888754 4899999999999999999999
Q ss_pred ccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+.+ +|.+++.... .++...+..++.||+.||.|||+++++|+||+|+||+++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~--~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 75 CLGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDS--NGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcC--CCCEEEeeCCcccccCcc
Confidence 974 7777775432 2788899999999999999999999999999999999984 678999999998765443
Q ss_pred --cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhcCCcchhhhhcccccch
Q 001034 1032 --LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS--PATLLARVIGIIGPIEQGMLAKGRDTYK 1107 (1182)
Q Consensus 1032 --~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d--~~elLakIv~ilGp~PeemL~~~k~s~k 1107 (1182)
.....+++.|+|||.+....++.++|+||||+++|+|++|..||.... +...+..++.....
T Consensus 147 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------- 212 (262)
T cd05572 147 QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGK-------------- 212 (262)
T ss_pred cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCC--------------
Confidence 334578899999999988889999999999999999999999998765 44444443210000
Q ss_pred hhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1108 YFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1108 ~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
. ......+..+.+||.+||+.+|.+||+ +.|+++||||+..
T Consensus 213 -------------------~---------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 213 -------------------L---------EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred -------------------C---------CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 0 001122678999999999999999999 9999999999853
No 202
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.3e-35 Score=320.17 Aligned_cols=256 Identities=23% Similarity=0.344 Sum_probs=208.4
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
....+|.+.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+.|+ ||++++++|.
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~------niv~~~~~~~ 85 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHP------NTIEYKGCYL 85 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCC------CEEEEEEEEE
Confidence 34567999999999999999999999999999999986432 2334567888888887654 8999999999
Q ss_pred ecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 942 YREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 942 d~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
.....|+||||+.|++.+++..... .+++..+..++.||+.||.|||+.+|+|+||+|+||+++. ++.++|+|
T Consensus 86 ~~~~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~--~~~~kL~d 158 (307)
T cd06607 86 REHTAWLVMEYCLGSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE--PGTVKLAD 158 (307)
T ss_pred eCCeEEEEHHhhCCCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC--CCCEEEee
Confidence 9999999999999998887764432 2788999999999999999999999999999999999984 67899999
Q ss_pred CCCccccCCCcccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1022 LGSSCFETDHLCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1022 FGLA~~~~~~~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
||++...... ....+++.|+|||++. ...++.++||||||+++|+|++|++||.+.+....+..+... ..
T Consensus 159 fg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~---- 231 (307)
T cd06607 159 FGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DS---- 231 (307)
T ss_pred cCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CC----
Confidence 9998765432 3456788999999985 356889999999999999999999999877655544333100 00
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
+.. .....+..+.+||.+||..+|.+||++.+++.||||....
T Consensus 232 -------------------------------~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 232 -------------------------------PTL-----SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred -------------------------------CCC-----CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 000 0012357899999999999999999999999999998764
No 203
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.8e-35 Score=306.31 Aligned_cols=250 Identities=26% Similarity=0.429 Sum_probs=204.2
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|.+.+.||.|+||.||++.++.++..+|+|.+.... .....+.+|+.+++.++|+ ||+++++.+.....+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~------~i~~~~~~~~~~~~~ 74 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHP------NIVTFFASFQENGRL 74 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCC------ChhhhhheeccCCeE
Confidence 5899999999999999999999999999999997542 2345667888888888654 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+|+||+.+ +|.+++..... ..+++..+..++.||+.||.|||+.+++|+||||+||+++. ....+||+|||.+
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~-~~~~~~l~d~~~~ 149 (257)
T cd08225 75 FIVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK-NGMVAKLGDFGIA 149 (257)
T ss_pred EEEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC-CCCeEEecccccc
Confidence 999999975 67776654321 23788999999999999999999999999999999999985 2235799999998
Q ss_pred cccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
....... ....+++.|+|||++....++.++|+|||||++|+|++|..||...+....+..+... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~--------- 218 (257)
T cd08225 150 RQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQG--Y--------- 218 (257)
T ss_pred hhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcc--c---------
Confidence 7554322 2346788999999998888999999999999999999999999876655544433200 0
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.....+..+..+.++|.+||..+|++|||+.+|++||||
T Consensus 219 --------------------------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 219 --------------------------------FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred --------------------------------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 000112346789999999999999999999999999998
No 204
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4.1e-36 Score=313.27 Aligned_cols=247 Identities=26% Similarity=0.375 Sum_probs=202.1
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+|++.+.||.|+||.||+|.+..+++.||+|++.+.. .....+.+|+.+++.+.| |||+++++.|....+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~ 74 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH------PFLVNLWYSFQDEEN 74 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC------CChHHHHHhhcCCCe
Confidence 4899999999999999999999999999999997643 345677788888888754 489999999999999
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.| +|..++... ..+++..+..++.||+.||.|||+++++|+||+|+||+++. ++.++|+|||+
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~l~d~~~ 146 (258)
T cd05578 75 MYLVVDLLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDE--QGHVHITDFNI 146 (258)
T ss_pred EEEEEeCCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcC--CCCEEEeeccc
Confidence 9999999986 566665543 13888999999999999999999999999999999999984 77899999999
Q ss_pred ccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhcCCcchhhhh
Q 001034 1025 SCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPA--TLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1025 A~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~--elLakIv~ilGp~PeemL~ 1100 (1182)
+...... .....++..|+|||++.+..++.++|+|||||++|+|++|..||...+.. ..+..... .
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~------- 216 (258)
T cd05578 147 ATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE---T------- 216 (258)
T ss_pred ccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc---c-------
Confidence 8764432 23456788999999999888999999999999999999999999876531 11111100 0
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH--HHHHcCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA--SDALKHPWL 1173 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA--eELLqHPWF 1173 (1182)
.........+..+.+||.+||+.||.+||++ .++++||||
T Consensus 217 ---------------------------------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 217 ---------------------------------ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ---------------------------------ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 0000112235889999999999999999999 999999998
No 205
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=5.5e-36 Score=327.51 Aligned_cols=282 Identities=30% Similarity=0.521 Sum_probs=219.3
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHh-cCCCCCCCcceEEEEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYV-NKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L-~h~~~l~HPnIVkL~dsFq 941 (1182)
.+.++|++.+.||.|+||.||+|.+..+++.+|||.+... .........|+.+++.+ .| +||++++++|.
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h------~ni~~~~~~~~ 77 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDH------PNIVKLLNVIK 77 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCC------CCccceeeeec
Confidence 4568899999999999999999999999999999988542 22334566788888888 54 48999999987
Q ss_pred ec--CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 942 YR--EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 942 d~--e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
.. ..+|+||||+.++|..++... .+.+..++.++.||+.||.|||+.||+||||||+|||++. ++.+||
T Consensus 78 ~~~~~~~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~--~~~~kl 148 (337)
T cd07852 78 AENDKDIYLVFEYMETDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNS--DCRVKL 148 (337)
T ss_pred cCCCceEEEEecccccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCcEEE
Confidence 54 468999999999888777542 2778888999999999999999999999999999999994 778999
Q ss_pred ecCCCccccCCC--------cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 001034 1020 IDLGSSCFETDH--------LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGI 1090 (1182)
Q Consensus 1020 iDFGLA~~~~~~--------~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~i 1090 (1182)
+|||++...... .....+++.|+|||++.+ ..++.++|+|||||++|+|++|++||.+......+.++...
T Consensus 149 ~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~ 228 (337)
T cd07852 149 ADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEV 228 (337)
T ss_pred eeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 999998653322 223567889999998865 45789999999999999999999999998888888888877
Q ss_pred cCCcchhhhhcccccchhhcccchhhhhhcchhhhh-hccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1091 IGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLE-YLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1091 lGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le-~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+.++...+........ ...+. .............+..+..+.+||.+||+.||.+|||+.++|+
T Consensus 229 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 229 IGPPSAEDIESIKSPFA--------------ATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred hCCCCHHHHHHHHhhhH--------------HHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 77655433322110000 00000 0001111122233446889999999999999999999999999
Q ss_pred CCCCCCC
Q 001034 1170 HPWLSHP 1176 (1182)
Q Consensus 1170 HPWFk~~ 1176 (1182)
||||+..
T Consensus 295 ~~~~~~~ 301 (337)
T cd07852 295 HPYVAQF 301 (337)
T ss_pred Chhhhhh
Confidence 9999665
No 206
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.9e-35 Score=297.94 Aligned_cols=249 Identities=32% Similarity=0.512 Sum_probs=205.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch-hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD-FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~-~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
.|.+.+.||.|+||.||++.+..+++.+++|++..... ....+.+|+.+++.+.+ ++|++++++|......++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~l 74 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH------PNIVKYYGSYLKKDELWI 74 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC------CCEeEEEEEEecCCeEEE
Confidence 48889999999999999999998999999999977643 45677888888888864 489999999999999999
Q ss_pred EEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|+||++ ++|.+++.... ..+++..+..++.||+.||.|||..|++|+||+|+||+++. .+.++|+|||.+..
T Consensus 75 ~~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~--~~~~~l~d~~~~~~ 147 (253)
T cd05122 75 VMEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTS--DGEVKLIDFGLSAQ 147 (253)
T ss_pred EEecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEcc--CCeEEEeecccccc
Confidence 999999 56766665432 13889999999999999999999999999999999999995 67899999999876
Q ss_pred cCCCc--ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1028 ETDHL--CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1028 ~~~~~--ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
..... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+....+..+.. ...
T Consensus 148 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~----------- 214 (253)
T cd05122 148 LSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGP----------- 214 (253)
T ss_pred ccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCC-----------
Confidence 65443 456788999999999988899999999999999999999999987654444333311 000
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
+.. .....++..+.+||.+||+.||.+|||+.++|+|||
T Consensus 215 ------------------------~~~----~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 215 ------------------------PGL----RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred ------------------------CCc----CcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 000 001113678999999999999999999999999999
No 207
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.6e-35 Score=309.79 Aligned_cols=248 Identities=26% Similarity=0.381 Sum_probs=196.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.|++.+.||.|+||.||+|.+..++..||+|++.... .....+.+|+.+++.+.|+ ||+++++++...
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~ 76 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHE------RIVQYYGCLRDR 76 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCC------CeeeEEEEEEcC
Confidence 5889999999999999999999999999999986432 2234566788888887654 899999998763
Q ss_pred --CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 --EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 --e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
..+++||||+.+ +|.+++.... .++...++.++.||+.||.|||+++|+||||+|+||+++. ++.++|+
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~--~~~~~l~ 148 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS--AGNVKLG 148 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC--CCCEEEc
Confidence 678999999985 6777665432 2788889999999999999999999999999999999984 6779999
Q ss_pred cCCCccccCCC------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDH------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||++...... .....++..|+|||++.+..++.++|+|||||++|+|++|+.||........+..+.... .
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~-~- 226 (266)
T cd06651 149 DFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-T- 226 (266)
T ss_pred cCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC-C-
Confidence 99998654321 123457889999999999899999999999999999999999997655433332221000 0
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
.| ......+..+.+|| +||..+|.+||++.+|++||||+
T Consensus 227 ----------------------------------~~------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 227 ----------------------------------NP------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred ----------------------------------CC------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 00 00112457788888 57778999999999999999996
No 208
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.7e-35 Score=307.11 Aligned_cols=249 Identities=26% Similarity=0.363 Sum_probs=198.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..|++.+.||.|+||.||++.+..+++.||||.+.... .....+.+|+.+++.+.| +||+++++++..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~ 75 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH------ERIVQYYGCLRD 75 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCC------CCeeeEEeEecc
Confidence 46899999999999999999999999999999986431 223466778888888854 489999999876
Q ss_pred c--CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 943 R--EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 943 ~--e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
. ..+|+||||+++ +|.+++.... .+++..+..++.||+.||.|||+++|+|+||||+|||++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~l 147 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDS--VGNVKL 147 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecC--CCCEEE
Confidence 4 568999999985 6777665332 2678889999999999999999999999999999999984 678999
Q ss_pred ecCCCccccCC------CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1020 IDLGSSCFETD------HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1020 iDFGLA~~~~~------~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
+|||++..... ......++..|+|||++.+..++.++|+|||||++|+|++|+.||........+.++.. .
T Consensus 148 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~ 224 (265)
T cd06652 148 GDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT---Q 224 (265)
T ss_pred CcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc---C
Confidence 99999875332 12334678899999999988899999999999999999999999976654443333210 0
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.. .+ ......+..+.++|++||. +|.+||++.++++|||+
T Consensus 225 ~~---------------------------------~~------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 225 PT---------------------------------NP------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV 264 (265)
T ss_pred CC---------------------------------CC------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence 00 00 0112345788999999995 99999999999999998
Q ss_pred C
Q 001034 1174 S 1174 (1182)
Q Consensus 1174 k 1174 (1182)
.
T Consensus 265 ~ 265 (265)
T cd06652 265 H 265 (265)
T ss_pred C
Confidence 4
No 209
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.9e-35 Score=311.54 Aligned_cols=261 Identities=26% Similarity=0.390 Sum_probs=202.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--C
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--E 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e 944 (1182)
++|++.+.||.|++|.||+|.+..+++.+|+|++.... .....+.+|+.+++.+.| |||++++++|... .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~ 74 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS------PYIVKYYGAFLDESSS 74 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCC------CCeeeeeeEEEccCCC
Confidence 46999999999999999999999999999999997643 245667888888888755 4899999998754 4
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+|+||||+++ +|.+++...... ...+++..+..++.||+.||.|||+.+++|+||+|+||+++. .+.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~l~~~~~~--~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~--~~~~~l~dfg 150 (287)
T cd06621 75 SIGIAMEYCEGGSLDSIYKKVKKR--GGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR--KGQVKLCDFG 150 (287)
T ss_pred eEEEEEEecCCCCHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec--CCeEEEeecc
Confidence 79999999985 676665533221 223788899999999999999999999999999999999985 6779999999
Q ss_pred CccccCCC-cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhhcCCcchh
Q 001034 1024 SSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP-----ATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1024 LA~~~~~~-~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~-----~elLakIv~ilGp~Pee 1097 (1182)
++...... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||..... .+....+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------ 224 (287)
T cd06621 151 VSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP------ 224 (287)
T ss_pred ccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC------
Confidence 98654332 2234578899999999999999999999999999999999999976521 12111111000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+............+..+.+||.+||.++|.+|||+.|+++||||+..
T Consensus 225 -------------------------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 272 (287)
T cd06621 225 -------------------------------NPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ 272 (287)
T ss_pred -------------------------------chhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence 000000000001235789999999999999999999999999999654
No 210
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.1e-35 Score=300.89 Aligned_cols=251 Identities=27% Similarity=0.427 Sum_probs=208.0
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|.+.+.||.|+||.||++.+..+++.||+|++.... ........|+++++.++|+ |++++++.+......
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~~~~~~~~~~~~~~~ 74 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHP------NIIKYYESFEEKGKL 74 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCC------ChhheEEEEecCCEE
Confidence 5899999999999999999999999999999997643 3445677888888888644 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++|||++++ +|..++...... ...+++..+..++.+|+.||.|||+.|++|+||+|+||+++. .+.++|+|||++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~--~~~~~l~d~~~~ 150 (258)
T cd08215 75 CIVMEYADGGDLSQKIKKQKKE--GKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTS--NGLVKLGDFGIS 150 (258)
T ss_pred EEEEEecCCCcHHHHHHHhhcc--CCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcC--CCcEEECCccce
Confidence 999999985 677777654321 124899999999999999999999999999999999999994 678999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------- 220 (258)
T cd08215 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY---------- 220 (258)
T ss_pred eecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC----------
Confidence 764433 2345678899999999998999999999999999999999999987765554444321100
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.......+..+.++|.+||..+|.+|||+.++|+||||
T Consensus 221 ---------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 221 ---------------------------------PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred ---------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 00111346789999999999999999999999999998
No 211
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.9e-35 Score=309.13 Aligned_cols=252 Identities=28% Similarity=0.421 Sum_probs=198.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-----------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-----------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD 938 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-----------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d 938 (1182)
+|.+.+.||.|+||.||+|.+..+++.||+|.++... ...+.+..|+.+++.+. |+||+++++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~ 75 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD------HLNIVQYLG 75 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC------CCCcceEEE
Confidence 5889999999999999999999999999999986421 11234566777777775 458999999
Q ss_pred EEEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 939 YFYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 939 sFqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
++.....+++||||+.+ +|.+++.... .++...++.++.||+.||.|||+.+++|+||+|+||+++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~--~~~~ 147 (272)
T cd06629 76 FETTEEYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA--DGIC 147 (272)
T ss_pred EeccCCceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcC--CCeE
Confidence 99999999999999985 5666665432 2788899999999999999999999999999999999984 7789
Q ss_pred EEecCCCccccCCC-----cccccCCCcccchhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh
Q 001034 1018 KVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLS--YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGI 1090 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~--yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~i 1090 (1182)
+|+|||++...... .....++..|+|||++.... ++.++|+||||+++|+|++|..||........+..+...
T Consensus 148 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 227 (272)
T cd06629 148 KISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK 227 (272)
T ss_pred EEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc
Confidence 99999998754322 22346788999999997654 889999999999999999999999765543332222100
Q ss_pred cCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1091 IGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1091 lGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
......+. ...+.++..+.+||.+||.++|.+|||+.++|+|
T Consensus 228 ---------------------------------~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 ---------------------------------RSAPPIPP-----DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ---------------------------------ccCCcCCc-----cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00000000 1123457899999999999999999999999999
Q ss_pred CCC
Q 001034 1171 PWL 1173 (1182)
Q Consensus 1171 PWF 1173 (1182)
|||
T Consensus 270 ~~~ 272 (272)
T cd06629 270 PFI 272 (272)
T ss_pred CCC
Confidence 997
No 212
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.5e-35 Score=305.74 Aligned_cols=246 Identities=28% Similarity=0.433 Sum_probs=201.8
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
+|++.+.||.|+||.||+++++.+++.||+|.++.. ....+....|+.+++.+.| +||+++++.|....++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH------PNIVAFKESFEADGHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC------CCcceEEEEEEECCEEE
Confidence 589999999999999999999999999999998653 2344566778888887754 48999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+++ ++.+++..... ..+++..+..++.||+.||.|||++||+|+||||+|||++. ++.++|+|||++.
T Consensus 75 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~ 148 (255)
T cd08219 75 IVMEYCDGGDLMQKIKLQRG----KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQ--NGKVKLGDFGSAR 148 (255)
T ss_pred EEEeeCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECC--CCcEEEcccCcce
Confidence 99999985 67776654321 13788999999999999999999999999999999999984 6779999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....+++.|+|||++.+..++.++|+||||+++|+|++|..||...+....+..+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~----------- 217 (255)
T cd08219 149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY----------- 217 (255)
T ss_pred eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC-----------
Confidence 54332 2345688999999999998999999999999999999999999988776555444421000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.......+..+.+||.+||+.||.+|||+.++|.-
T Consensus 218 --------------------------------~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 --------------------------------KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --------------------------------CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 00011245779999999999999999999999874
No 213
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.7e-37 Score=341.59 Aligned_cols=253 Identities=27% Similarity=0.507 Sum_probs=220.8
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.+.-||+|.+.||+|.||+|-+|.+...|+.||||.|++++ ...-++.+|++|+..|+|+ ||+.+|.+|.
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHP------hII~IyEVFE 123 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHP------HIIQIYEVFE 123 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCC------ceeehhhhhc
Confidence 35678999999999999999999999999999999998764 4455678899999888765 8999999999
Q ss_pred ecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
....+.|||||.. |.|++++..++. +++.+++.|++||+.|+.|||+++++|||||.+|||+|. ++++||.
T Consensus 124 NkdKIvivMEYaS~GeLYDYiSer~~------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~--N~NiKIA 195 (668)
T KOG0611|consen 124 NKDKIVIVMEYASGGELYDYISERGS------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ--NNNIKIA 195 (668)
T ss_pred CCceEEEEEEecCCccHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC--CCCeeee
Confidence 9999999999998 579999987653 999999999999999999999999999999999999995 7789999
Q ss_pred cCCCccccCCC--cccccCCCcccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1021 DLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYD-KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1021 DFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS-~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
|||++....+. ..++||+|-|.+||++.|.+|. +.+|.||||++||.|+.|..||.+.+...++.+|.. |.
T Consensus 196 DFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~--Ga---- 269 (668)
T KOG0611|consen 196 DFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISR--GA---- 269 (668)
T ss_pred ccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhc--cc----
Confidence 99999765443 5688999999999999999985 789999999999999999999999999888888831 10
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
+. .+..+..+.-||+.||..||.+|.|..++..|=|++=.|
T Consensus 270 -----------------------------Yr----------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy 310 (668)
T KOG0611|consen 270 -----------------------------YR----------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVNWGY 310 (668)
T ss_pred -----------------------------cc----------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheeeccc
Confidence 11 122346788999999999999999999999999986443
No 214
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.3e-35 Score=310.68 Aligned_cols=256 Identities=27% Similarity=0.419 Sum_probs=205.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.|++.+.||.|+||.||+|.+..+++.||+|+++.. ......+.+|+.+++.+.+. .|++|++++++|......|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~---~~~~vi~~~~~~~~~~~~~ 78 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQS---QPPNITKYYGSYLKGPRLW 78 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccC---CCCCeeeEeeeeeeCCEEE
Confidence 478889999999999999999999999999998754 23345677889999988753 5779999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+.+ +|.+++... .+++..+..++.||+.||.|||+.||+|+||+|+||+++. .+.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06917 79 IIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTN--TGNVKLCDFGVAA 149 (277)
T ss_pred EEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcC--CCCEEEccCCcee
Confidence 99999986 566655422 3788999999999999999999999999999999999995 7789999999987
Q ss_pred ccCCC---cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||...........+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~------------ 217 (277)
T cd06917 150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS------------ 217 (277)
T ss_pred ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC------------
Confidence 54432 234468889999999865 45789999999999999999999999765543322111000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
..+. + .....+.++.+||++||+.||.+||++.+++.||||+....+
T Consensus 218 -------------------------~~~~---~--~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~~~ 264 (277)
T cd06917 218 -------------------------KPPR---L--EDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHSKT 264 (277)
T ss_pred -------------------------CCCC---C--CcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccccC
Confidence 0000 0 001146789999999999999999999999999999887643
No 215
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.7e-35 Score=304.29 Aligned_cols=249 Identities=31% Similarity=0.487 Sum_probs=201.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch---hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD---FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~---~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|.+.+.||.|+||.||++.+..+++.||+|+++.... ....+..|+.+++.+.|. ||+++++.+.....+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~------~i~~~~~~~~~~~~~ 74 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHP------NLVKYYGVEVHREKV 74 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCC------ChhheeeeEecCCEE
Confidence 68999999999999999999999999999999986543 567788899998888654 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++|+||+.+ +|.+++.... .+++..++.++.||+.||.|||+.||+|+||+|+||+++. .+.+||+|||++
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~kl~d~g~~ 146 (264)
T cd06626 75 YIFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDH--NGVIKLGDFGCA 146 (264)
T ss_pred EEEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC--CCCEEEcccccc
Confidence 999999985 5666655321 2778889999999999999999999999999999999995 678999999998
Q ss_pred cccCCCc-------ccccCCCcccchhhhcCCC---CCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhcCCc
Q 001034 1026 CFETDHL-------CSYVQSRSYRAPEVILGLS---YDKKIDIWSLGCILAELCTGNVLFQNDS-PATLLARVIGIIGPI 1094 (1182)
Q Consensus 1026 ~~~~~~~-------ss~vGTp~YmAPEVLlg~~---yS~kSDIWSLGVILYELLTGr~PF~g~d-~~elLakIv~ilGp~ 1094 (1182)
....... ....+++.|+|||++.+.. ++.++|||||||++|+|++|+.||.... .......+.. +..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~ 224 (264)
T cd06626 147 VKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA--GHK 224 (264)
T ss_pred cccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc--CCC
Confidence 7644321 1245688999999998766 8899999999999999999999997643 2222222110 000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
+ ..| .....+..+.+||.+||+.+|.+|||+.+++.||||
T Consensus 225 ~--------------------------------~~~-------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 225 P--------------------------------PIP-------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred C--------------------------------CCC-------cccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0 011 112346789999999999999999999999999997
No 216
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=334.34 Aligned_cols=261 Identities=27% Similarity=0.430 Sum_probs=208.9
Q ss_pred ecCCEEEE-EEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe---
Q 001034 867 IAGRYHVT-EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY--- 942 (1182)
Q Consensus 867 L~drYeIl-k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd--- 942 (1182)
+.++|.|. ++||-|--|.|..|.++.||+.+|+|++.-.. ...+|+++....+ .|+|||.++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~----KARrEVeLHw~~s-----~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP----KARREVELHWMAS-----GHPHIVSIIDVYENSYQ 129 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH----HHHhHhhhhhhhc-----CCCceEEeehhhhhhcc
Confidence 34667776 67999999999999999999999999996443 4557777665554 56799999998764
Q ss_pred -cCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC-CCceEEE
Q 001034 943 -REHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY-SRCEVKV 1019 (1182)
Q Consensus 943 -~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~-~dG~IKL 1019 (1182)
...+.||||.|.|+ |+.-+..+ ++..|++.++..|++||..||.|||+++|.||||||+|+|.... .+..+||
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~----g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDR----GDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHc----ccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEe
Confidence 47899999999964 66655533 45569999999999999999999999999999999999999752 4568999
Q ss_pred ecCCCccccC--CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1020 IDLGSSCFET--DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1020 iDFGLA~~~~--~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
+|||+|+... ....+.|-||.|.|||++-..+|+..||+||||||||-||+|++||++..-.. ++.+
T Consensus 206 tDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-----------ispg 274 (400)
T KOG0604|consen 206 TDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-----------ISPG 274 (400)
T ss_pred cccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-----------CChh
Confidence 9999998655 44567899999999999999999999999999999999999999998754211 1111
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
|.. ........+..|.+ ..+|+.++++|+++|..+|.+|+|.++++.|||+++.
T Consensus 275 Mk~------------------rI~~gqy~FP~pEW-------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 275 MKR------------------RIRTGQYEFPEPEW-------SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred HHh------------------HhhccCccCCChhH-------hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 111 01112222333333 3458899999999999999999999999999999865
No 217
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.6e-35 Score=311.14 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=205.2
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
-|++++.||.|+||.||++.+..++..||||++.... .....+.+|+.+++.+.| +||+++++.|.....+|
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYVTKYYGSYLKDTKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC------CCEeEEEEEEEeCCeEE
Confidence 4778889999999999999999999999999986543 334556678888887754 58999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+++ +|..++... .++...+..++.||+.||.|||+.|++|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06641 79 IIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSE--HGEVKLADFGVAG 149 (277)
T ss_pred EEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECC--CCCEEEeecccce
Confidence 99999986 555555321 2788899999999999999999999999999999999984 6789999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....++..|+|||.+.+..++.++|+|||||++|+|++|..||...........+... .
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~---------- 217 (277)
T cd06641 150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN--N---------- 217 (277)
T ss_pred ecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--C----------
Confidence 54332 22346788999999998888999999999999999999999999776554433332100 0
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
.+ .....++..+.+||.+||+.+|.+||++.++++||||......+
T Consensus 218 -------------------------~~------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~~ 263 (277)
T cd06641 218 -------------------------PP------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKT 263 (277)
T ss_pred -------------------------CC------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhcc
Confidence 00 01123467899999999999999999999999999999887654
No 218
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-35 Score=314.52 Aligned_cols=266 Identities=23% Similarity=0.337 Sum_probs=204.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++++.||+|+||+||++.+..+++.||+|++... ......+.+|+.+++.+.| +||+++++++.....+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~~~ 78 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS------PYIVSFYGAFLNENNI 78 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC------CCcceEeeeEecCCEE
Confidence 5788999999999999999999999999999998754 2344667788898888754 4899999999999999
Q ss_pred EEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 947 LIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
|+||||++++ |..++.... .+++..++.++.+++.||.|||+ .+++||||+|+||+++. ++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~--~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNS--RGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECC--CCcEEEccCCc
Confidence 9999999964 555544321 27889999999999999999997 69999999999999984 67899999999
Q ss_pred ccccCC-CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1025 SCFETD-HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1025 A~~~~~-~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
+..... .....+++..|+|||++.+..++.++|+|||||++|+|++|+.||............ +..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~-------~~~~~~--- 220 (284)
T cd06620 151 SGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD-------PMGILD--- 220 (284)
T ss_pred ccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh-------hhHHHH---
Confidence 864322 223457899999999999889999999999999999999999999865432110000 000000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
.+ ........+. + .....+..+.+||.+||+.||.+|||+.|+++||||.....+
T Consensus 221 ----~~------------~~~~~~~~~~---~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~ 275 (284)
T cd06620 221 ----LL------------QQIVQEPPPR---L--PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRA 275 (284)
T ss_pred ----HH------------HHHhhccCCC---C--CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 00 0000000000 0 001245789999999999999999999999999999776543
No 219
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.4e-35 Score=314.73 Aligned_cols=261 Identities=24% Similarity=0.362 Sum_probs=201.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
++|++.+.||.|+||.||++.+..+++.||+|.+.... .....+..|+.++.++. .|+||+++++++......
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~~~~~~~~~~~~ 78 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-----DCPYIVKFYGALFREGDC 78 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-----CCCCEeeeeeEEecCCcE
Confidence 34666778999999999999999999999999987543 33445677888887775 245999999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++||||+.+++..+....... ....+++..+..++.|++.||.|||+ .+|+||||||+|||++. ++.++|+|||++
T Consensus 79 ~~~~e~~~~~l~~l~~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~--~~~~kl~dfg~~ 155 (288)
T cd06616 79 WICMELMDISLDKFYKYVYEV-LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDR--NGNIKLCDFGIS 155 (288)
T ss_pred EEEEecccCCHHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEcc--CCcEEEeecchh
Confidence 999999998776655432111 11238899999999999999999997 59999999999999985 677999999998
Q ss_pred cccCCC--cccccCCCcccchhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDH--LCSYVQSRSYRAPEVILGL---SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~--~ss~vGTp~YmAPEVLlg~---~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
...... .....+++.|+|||++.+. .++.++|||||||++|+|++|++||..... ....+.......+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~----- 228 (288)
T cd06616 156 GQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDP----- 228 (288)
T ss_pred HHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCC-----
Confidence 654322 2334678899999999876 689999999999999999999999975431 1222211110000
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
|... ......++..+.+||.+||+.+|.+|||+.++++||||..
T Consensus 229 -----------------------------~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 229 -----------------------------PILS--NSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred -----------------------------CcCC--CcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 0000 0011235788999999999999999999999999999976
No 220
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=335.81 Aligned_cols=244 Identities=26% Similarity=0.385 Sum_probs=198.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcE-EEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC-
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMD-VCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE- 944 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~-VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e- 944 (1182)
...+.+.||.|+||+||++.. .|.. ||+|++.... .....+.+|+.+|..++|+ |||++++++....
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~Hp------NIV~f~G~~~~~~~ 113 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHP------NIVQFYGACTSPPG 113 (362)
T ss_pred HhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCC------CeeeEEEEEcCCCC
Confidence 345556699999999999974 5666 9999997643 2256889999999998655 8999999999887
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC-ccccccCCccEEEccCCCc-eEEEec
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG-LIHCDLKPENILVKSYSRC-EVKVID 1021 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G-IIHRDIKPeNILIDs~~dG-~IKLiD 1021 (1182)
.++|||||+++ +|..++..... ..++...+..|+.+|+.||.|||+++ ||||||||+|||++. ++ ++||+|
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~----~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~--~~~~~KI~D 187 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRK----RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDL--KGKTLKIAD 187 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcC--CCCEEEECC
Confidence 79999999995 66666655311 23999999999999999999999999 999999999999994 65 899999
Q ss_pred CCCccccCC---CcccccCCCcccchhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1022 LGSSCFETD---HLCSYVQSRSYRAPEVIL--GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1022 FGLA~~~~~---~~ss~vGTp~YmAPEVLl--g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
||+++.... ......||+.|||||++. ...|+.++||||||++||||+||..||.+..+.+....++.. +..
T Consensus 188 FGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~-~~R-- 264 (362)
T KOG0192|consen 188 FGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVG-GLR-- 264 (362)
T ss_pred CccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-CCC--
Confidence 999986553 344478999999999999 669999999999999999999999999998875555554310 000
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
..+| ...+..+..||.+|+..||.+||+..+++.
T Consensus 265 ------------------------------p~~p---------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 265 ------------------------------PPIP---------KECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred ------------------------------CCCC---------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 0011 125688999999999999999999998764
No 221
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=3.9e-35 Score=313.41 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=190.2
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||+|+||.||++.+..+++.+|+|++.+... .......+..+++.+... .|++|+.++++|.....+|+|||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~lv~e 77 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG---DCPFIVCMTYAFHTPDKLCFILD 77 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC---CCCcEeEEEEEEecCCeEEEEEe
Confidence 37999999999999999999999999976431 112234444444444332 57799999999999999999999
Q ss_pred eccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 952 LLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|+.+ +|..++.... .+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~--~~~~~l~dfg~~~~~~~ 149 (279)
T cd05633 78 LMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (279)
T ss_pred cCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECC--CCCEEEccCCcceeccc
Confidence 9996 4555554322 2899999999999999999999999999999999999984 67899999999865432
Q ss_pred -CcccccCCCcccchhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhhcCCcchhhhhcccccc
Q 001034 1031 -HLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPAT--LLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1031 -~~ss~vGTp~YmAPEVLl-g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~e--lLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
......+++.|+|||.+. +..++.++|+|||||++|+|++|..||....... .+..+.
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------------------ 211 (279)
T cd05633 150 KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT------------------ 211 (279)
T ss_pred cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh------------------
Confidence 223457899999999987 4568999999999999999999999996532211 111110
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSH 1175 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~ 1175 (1182)
...+ .......+..+.+||.+||..||.+|| |+.++++||||+.
T Consensus 212 --------------------~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 212 --------------------LTVN-----VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred --------------------hcCC-----cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 0000 001123568899999999999999999 6999999999986
No 222
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-36 Score=346.81 Aligned_cols=252 Identities=27% Similarity=0.397 Sum_probs=220.2
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
.+.|.+++++|+|+||.+++++++...+.|++|.+.... .......+|+.+++++.|+ |||.++++|..+.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP------~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHP------NIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCC------CeeeeccchhcCC
Confidence 367999999999999999999999999999999998654 3334678899999987655 8999999999998
Q ss_pred e-EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 945 H-LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 945 ~-LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
. +||||+|++| ++.+.++..+ ...|++..+..|+.||+.||.|||++.|+|||||+.|||+.. ++.|||.||
T Consensus 77 ~~l~Ivm~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk--~~~VkLgDf 150 (426)
T KOG0589|consen 77 QLLCIVMEYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTK--DKKVKLGDF 150 (426)
T ss_pred ceEEEEEeecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccc--cCceeecch
Confidence 8 9999999996 5666666554 245999999999999999999999999999999999999995 666899999
Q ss_pred CCccccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1023 GSSCFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1023 GLA~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
|+|+..... ..+.+|||.|+.||++.+.+|+.++|||||||++|||++-+++|.+.+...++.+|+.....
T Consensus 151 GlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~------ 224 (426)
T KOG0589|consen 151 GLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS------ 224 (426)
T ss_pred hhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC------
Confidence 999876654 45789999999999999999999999999999999999999999999999999888644311
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
+....++.+++.||..||+.+|..||+|.+||.+|.+.
T Consensus 225 -------------------------------------Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 225 -------------------------------------PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred -------------------------------------CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 12235578999999999999999999999999998875
No 223
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.9e-35 Score=313.68 Aligned_cols=246 Identities=22% Similarity=0.331 Sum_probs=191.8
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccchh----hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF----FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~----~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||.|+||.||+|.+..+++.||+|++.+.... ......|..+++.+.+ ..||+|++++++|.....+|+|||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~v~e 77 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPDKLSFILD 77 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---CCCCcEeeeeeeeecCCEEEEEEe
Confidence 379999999999999999999999998764311 1223445555554443 257899999999999999999999
Q ss_pred ecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 952 LLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|+.|+ |..++.... .+++..++.++.|++.||.|||+.+|+||||||+|||++. ++.++|+|||++.....
T Consensus 78 ~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~--~~~~kl~dfg~~~~~~~ 149 (278)
T cd05606 78 LMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE--HGHVRISDLGLACDFSK 149 (278)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECC--CCCEEEccCcCccccCc
Confidence 99865 544443221 3899999999999999999999999999999999999984 67799999999864432
Q ss_pred -CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhhcCCcchhhhhccccc
Q 001034 1031 -HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPA---TLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1031 -~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~---elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
.....+++..|+|||++.+. .++.++|+|||||++|+|++|+.||...... .....+.
T Consensus 150 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----------------- 212 (278)
T cd05606 150 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL----------------- 212 (278)
T ss_pred cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-----------------
Confidence 23345789999999999754 6899999999999999999999999765321 1111110
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
... .......+..+.+||.+||..+|.+|| ++.++++||||+..
T Consensus 213 ------------------~~~---------~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 213 ------------------TMA---------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred ------------------ccC---------CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 000 001123478999999999999999999 99999999999765
No 224
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=9.8e-36 Score=320.53 Aligned_cols=256 Identities=25% Similarity=0.423 Sum_probs=205.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
+.|.....||.|+||.||++.+..++..||||.+.... .....+..|+.+++.+.| +||+++++.|....+.|
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h------~~ii~~~~~~~~~~~~~ 95 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH------ENVVDMYNSYLVGDELW 95 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC------CcHHHHHHheecCCeEE
Confidence 44555678999999999999999999999999986543 334456778888887754 48999999999999999
Q ss_pred EEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+.++ |..++. .. .+++..+..++.||+.||.|||+++|+||||||+||+++. ++.++|+|||++.
T Consensus 96 lv~e~~~~~~L~~~~~-~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~--~~~~kL~dfg~~~ 166 (292)
T cd06658 96 VVMEFLEGGALTDIVT-HT------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS--DGRIKLSDFGFCA 166 (292)
T ss_pred EEEeCCCCCcHHHHHh-cC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCEEEccCcchh
Confidence 999999875 444432 21 2788899999999999999999999999999999999984 6779999999986
Q ss_pred ccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...+....+..+...+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--------- 237 (292)
T cd06658 167 QVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR--------- 237 (292)
T ss_pred hcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc---------
Confidence 43222 234568899999999998899999999999999999999999998776655444432111000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
. ......+..+.+||.+||..||.+|||+.++|+||||.....|.
T Consensus 238 -------------------------~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 238 -------------------------V-------KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred -------------------------c-------ccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 0 00123467899999999999999999999999999999887664
No 225
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1e-34 Score=296.83 Aligned_cols=248 Identities=30% Similarity=0.420 Sum_probs=203.9
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--C
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--E 944 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e 944 (1182)
+|.+.+.||.|+||.||+|.+..+++.|++|++.... .....+.+|+.+++.+.| ++|+++++.+... .
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH------PNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC------CCEeeEEEEEecCCCC
Confidence 4888999999999999999999999999999997665 346677889999998864 4899999999988 8
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+++||||+. ++|.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. .+.++|+|||
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~--~~~~~l~d~~ 146 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS--DGVVKLADFG 146 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcC--CCCEEEcccc
Confidence 9999999996 56777765433 3889999999999999999999999999999999999995 6789999999
Q ss_pred CccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhcCCcchh
Q 001034 1024 SSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDS-PATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1024 LA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d-~~elLakIv~ilGp~Pee 1097 (1182)
.+...... .....++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ....+..+. .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~----- 218 (260)
T cd06606 147 CAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIG---S----- 218 (260)
T ss_pred cEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhcc---c-----
Confidence 98765443 234567889999999998889999999999999999999999997655 111111110 0
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...........+..+.+||.+||..+|.+||++.++|+||||
T Consensus 219 ----------------------------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 219 ----------------------------------SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred ----------------------------------cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 000000112236889999999999999999999999999998
No 226
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=339.61 Aligned_cols=256 Identities=23% Similarity=0.346 Sum_probs=218.3
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.+-..+|.++.+||+|+||+|.++..+.+.+.||||+++++. +..+-.+.|.++|..... .|++++|+..|
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~k-----ppFL~qlHScF 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLVQLHSCF 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCC-----CchHHHHHHHh
Confidence 345678999999999999999999999999999999999864 233445566676665544 35999999999
Q ss_pred EecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 941 YYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 941 qd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
+.-..+|+||||+.|+.+.+...+-.. |.++.+.+|+.+|+-||-|||++|||+||||.+|||++. .|+|||+
T Consensus 420 QTmDRLyFVMEyvnGGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~--eGHiKi~ 492 (683)
T KOG0696|consen 420 QTMDRLYFVMEYVNGGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS--EGHIKIA 492 (683)
T ss_pred hhhhheeeEEEEecCchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEecc--CCceEee
Confidence 999999999999998877776655322 899999999999999999999999999999999999994 8889999
Q ss_pred cCCCccc---cCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1021 DLGSSCF---ETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1021 DFGLA~~---~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
|||+++- ....+.++||||.|+|||++..++|+.++||||+||+|||||.|.+||.+++..++++.|+..--..|
T Consensus 493 DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP-- 570 (683)
T KOG0696|consen 493 DFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP-- 570 (683)
T ss_pred ecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc--
Confidence 9999863 44556789999999999999999999999999999999999999999999999999999963221111
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHcCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-----SDALKHPW 1172 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-----eELLqHPW 1172 (1182)
.-.|.++.+++..+|...|.+|+.. +++-.|||
T Consensus 571 ------------------------------------------KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~F 608 (683)
T KOG0696|consen 571 ------------------------------------------KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPF 608 (683)
T ss_pred ------------------------------------------ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcc
Confidence 1236789999999999999999653 57899999
Q ss_pred CCCC
Q 001034 1173 LSHP 1176 (1182)
Q Consensus 1173 Fk~~ 1176 (1182)
|...
T Consensus 609 FR~i 612 (683)
T KOG0696|consen 609 FRRI 612 (683)
T ss_pred hhhc
Confidence 9753
No 227
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.8e-35 Score=319.31 Aligned_cols=253 Identities=24% Similarity=0.381 Sum_probs=202.6
Q ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 873 VTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 873 Ilk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
....||.|+||.||++.+..+++.||+|++.... .....+.+|+.+++.+.| |||+++++.|......|+|||
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------p~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH------QNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC------CchhhhhhheeeCCeEEEEEe
Confidence 3447899999999999999999999999986532 233456677777777654 589999999999999999999
Q ss_pred ecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC-
Q 001034 952 LLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD- 1030 (1182)
Q Consensus 952 yL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~- 1030 (1182)
|+.++.+..+.... .+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++.....
T Consensus 99 ~~~~~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~--~~~~kL~dfg~~~~~~~~ 170 (297)
T cd06659 99 FLQGGALTDIVSQT------RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL--DGRVKLSDFGFCAQISKD 170 (297)
T ss_pred cCCCCCHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEcc--CCcEEEeechhHhhcccc
Confidence 99965443333221 2788999999999999999999999999999999999984 67899999999864332
Q ss_pred --CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchh
Q 001034 1031 --HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKY 1108 (1182)
Q Consensus 1031 --~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~ 1108 (1182)
......+++.|+|||++.+..++.++|+|||||++|+|++|+.||........+..+.... +
T Consensus 171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~------------- 234 (297)
T cd06659 171 VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---P------------- 234 (297)
T ss_pred cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC---C-------------
Confidence 2234578899999999999899999999999999999999999998777655554432100 0
Q ss_pred hcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1109 FTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1109 F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
.........+..+.+||++||+.+|.+||++.++++||||.....|.
T Consensus 235 -------------------------~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~ 281 (297)
T cd06659 235 -------------------------PKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPE 281 (297)
T ss_pred -------------------------CCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcc
Confidence 00011123467899999999999999999999999999999887553
No 228
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.6e-35 Score=311.14 Aligned_cols=252 Identities=26% Similarity=0.386 Sum_probs=204.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..|++++.||.|+||.||+|.+..++..||+|++.... .....+..|+.+++.+.| ++|+++++++.....+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~ 77 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYVTKYYGSYLKGTKL 77 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC------CCEeeEEEEEEECCEE
Confidence 45788889999999999999999999999999987543 344567778888887755 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++... .+++..+..++.|++.||.|||+.+++|+||+|+||+++. ++.++|+|||++
T Consensus 78 ~lv~e~~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~--~~~~~l~dfg~~ 148 (277)
T cd06640 78 WIIMEYLGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSE--QGDVKLADFGVA 148 (277)
T ss_pred EEEEecCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcC--CCCEEEcccccc
Confidence 999999986 666665421 2778889999999999999999999999999999999984 677999999998
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....++..|+|||++.+..++.++|+|||||++|+|++|.+||....+......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~----------- 217 (277)
T cd06640 149 GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN----------- 217 (277)
T ss_pred eeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC-----------
Confidence 654322 233467888999999999899999999999999999999999998766544332221000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYE 1178 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~e 1178 (1182)
.+ ......+..+.+||.+||+.+|.+||++.++|+||||.....
T Consensus 218 --------------------------~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 218 --------------------------PP------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred --------------------------CC------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 00 011123567899999999999999999999999999987643
No 229
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.2e-35 Score=311.30 Aligned_cols=248 Identities=25% Similarity=0.321 Sum_probs=193.8
Q ss_pred CCEEEEEEe--ccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVTEYL--GSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIlk~L--GkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+.|.+.+.+ |.|+||.||+++++.++..+|+|++....... .|+.....+. .|+||+++++.|.....+
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~-----~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMK-----DNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhh-----cCCCEEEEEEEEecCCee
Confidence 345565555 99999999999999999999999997543211 1222222221 367999999999999999
Q ss_pred EEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCc-eEEEecCCC
Q 001034 947 LIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC-EVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG-~IKLiDFGL 1024 (1182)
|+||||++ ++|.+++.... .+++..++.++.||+.||.|||+.|++||||||+||+++. .+ .++|+|||+
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~--~~~~~~l~dfg~ 156 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR--AKDRIYLCDYGL 156 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC--CCCeEEEecCcc
Confidence 99999997 57888776543 3899999999999999999999999999999999999985 44 799999999
Q ss_pred ccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhhcCCcchhhhhccc
Q 001034 1025 SCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATL-LARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1025 A~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~el-LakIv~ilGp~PeemL~~~k 1103 (1182)
+...... ....++..|+|||++.+..++.++|||||||++|+|++|+.||........ ...+...
T Consensus 157 ~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 222 (267)
T PHA03390 157 CKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR------------- 222 (267)
T ss_pred ceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh-------------
Confidence 8765433 234688999999999999999999999999999999999999975443221 1111000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-HHHHHcCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-ASDALKHPWLSH 1175 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-AeELLqHPWFk~ 1175 (1182)
... .....+..+..+.+||.+||+.+|.+||+ +.+||+||||+.
T Consensus 223 -------------------------~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 223 -------------------------QQK---KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred -------------------------hcc---cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 000 00111246789999999999999999996 599999999974
No 230
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.4e-34 Score=297.74 Aligned_cols=247 Identities=30% Similarity=0.434 Sum_probs=205.3
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++.+.||.|+||.||++++..+++.||+|.+.... .....+..|+.+++.+.|+ +++++++++.....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~ 74 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHP------NIVKYIGSIETSDSL 74 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCC------CccEEEEEEEeCCEE
Confidence 5899999999999999999999999999999998764 3556778888888888654 899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++.... .+++..+..++.|++.||.|||+.||+||||+|+||+++. .+.++|+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~~~ 146 (254)
T cd06627 75 YIILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTK--DGVVKLADFGVA 146 (254)
T ss_pred EEEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECC--CCCEEEeccccc
Confidence 999999986 6766665432 2889999999999999999999999999999999999995 678999999998
Q ss_pred cccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
....... ....++..|+|||.+.+..++.++|+||||+++|+|++|..||........+.++.. .
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~---------- 214 (254)
T cd06627 147 TKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ--D---------- 214 (254)
T ss_pred eecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--c----------
Confidence 7654432 245678899999999888899999999999999999999999987654433333210 0
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.. .......+..+.+||.+||..+|++|||+.++|.||||
T Consensus 215 -------------------------~~------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 215 -------------------------DH------PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred -------------------------CC------CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 00 00112346889999999999999999999999999998
No 231
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.2e-35 Score=308.55 Aligned_cols=250 Identities=20% Similarity=0.241 Sum_probs=200.8
Q ss_pred CCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
++|.+.+.||+|+||.||+|... .+++.||||+++.... ....+.+|+.+++.+.|+ ||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~ 78 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE------NIVKFYGVCT 78 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCC------CchheeeEEe
Confidence 56889999999999999999874 3468899999976432 346778899999988654 8999999999
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcc--------cCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRE--------SGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY 1012 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~--------sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~ 1012 (1182)
....+|+||||+.+ +|.+++..... ......+++..+..++.||+.||.|||++|++||||||+|||++.
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~- 157 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY- 157 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC-
Confidence 99999999999985 67777764422 111224788899999999999999999999999999999999984
Q ss_pred CCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 001034 1013 SRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLAR 1086 (1182)
Q Consensus 1013 ~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLak 1086 (1182)
++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+..+.+..
T Consensus 158 -~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05049 158 -DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIEC 236 (280)
T ss_pred -CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence 688999999998653221 123345678999999999999999999999999999998 9999988776665554
Q ss_pred HHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHH
Q 001034 1087 VIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASD 1166 (1182)
Q Consensus 1087 Iv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeE 1166 (1182)
+..... .......+..+.+||++||+.||.+|||+.|
T Consensus 237 ~~~~~~-------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e 273 (280)
T cd05049 237 ITQGRL-------------------------------------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKD 273 (280)
T ss_pred HHcCCc-------------------------------------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 421000 0011234678999999999999999999999
Q ss_pred HHc
Q 001034 1167 ALK 1169 (1182)
Q Consensus 1167 LLq 1169 (1182)
+++
T Consensus 274 il~ 276 (280)
T cd05049 274 IHE 276 (280)
T ss_pred HHH
Confidence 986
No 232
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.6e-35 Score=309.61 Aligned_cols=248 Identities=25% Similarity=0.312 Sum_probs=196.0
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||.|+||+||+|.+..+++.||+|++.... .....+..|+.+++.++| |+|++++++|....++|+||||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~lv~e~ 74 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS------RFIVSLAYAFETKDDLCLVMTL 74 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC------CCEeeeeeEEecCCeEEEEEec
Confidence 689999999999999999999999997532 223345678888888864 4899999999999999999999
Q ss_pred ccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+.+ +|.+++..... ..+++..+..++.||+.||.|||+.|++|+||+|+|||++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~--~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 75 MNGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDD--HGNVRISDLGLAVELKGG 148 (277)
T ss_pred CCCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC--CCCEEEccCcchhhhccC
Confidence 985 66666654332 23889999999999999999999999999999999999984 677999999998754322
Q ss_pred --cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhh
Q 001034 1032 --LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYF 1109 (1182)
Q Consensus 1032 --~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F 1109 (1182)
.....++..|+|||++.+..++.++|+|||||++|+|++|+.||...........+....
T Consensus 149 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------------------ 210 (277)
T cd05577 149 KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT------------------ 210 (277)
T ss_pred CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc------------------
Confidence 223467788999999998889999999999999999999999997654321111111000
Q ss_pred cccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCCCC
Q 001034 1110 TKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLSHP 1176 (1182)
Q Consensus 1110 ~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk~~ 1176 (1182)
.. .........+..+.+||++||+.||.+|| ++.+|+.||||+..
T Consensus 211 -------------------~~---~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 211 -------------------LE---MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred -------------------cc---ccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 00 00001123478899999999999999999 99999999999653
No 233
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.1e-34 Score=304.67 Aligned_cols=247 Identities=20% Similarity=0.261 Sum_probs=203.1
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
..|.+.+.||.|+||.||+|.++.+++.||+|++.........+.+|+.+++.+.| +||+++++++.....+++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTREPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC------CChhheEEEEcCCCCcEE
Confidence 46899999999999999999999999999999998766556678889999998865 489999999999999999
Q ss_pred EEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+. ++|.+++..... ..+++..++.++.||+.||.|||+.+++||||||+|||++. ++.+||+|||++..
T Consensus 80 v~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~df~~~~~ 153 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE--NHLVKVADFGLSRL 153 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCcEEeCCCccccc
Confidence 999997 567777754321 23788889999999999999999999999999999999984 77899999999876
Q ss_pred cCCCcc----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1028 ETDHLC----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1028 ~~~~~s----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... ....+..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+....+.....
T Consensus 154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~---------- 223 (263)
T cd05052 154 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYR---------- 223 (263)
T ss_pred cccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC----------
Confidence 543321 1223567999999999999999999999999999998 9999988776655544421000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
+ ......+..+.+||.+||+.+|.+|||+.++++.
T Consensus 224 ---------------------------~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 224 ---------------------------M------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred ---------------------------C------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 0 0012346889999999999999999999999863
No 234
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.9e-36 Score=330.31 Aligned_cols=296 Identities=28% Similarity=0.438 Sum_probs=231.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCc----EEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGM----DVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr----~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
..|+++..||+|.||.||+|..+.++. .||||.++..+ .......+|+.+++.+.|+ ||+.|..+|.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~------nvi~Lv~Vfl 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHP------NVISLVKVFL 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCC------cchhHHHHHh
Confidence 358899999999999999997655433 68999998663 2335667899999998766 8999998888
Q ss_pred e-cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC--CCceEE
Q 001034 942 Y-REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY--SRCEVK 1018 (1182)
Q Consensus 942 d-~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~--~dG~IK 1018 (1182)
. ...+++++||.+.+|+..++..+.... ..++...++.|++||+.|+.|||++=|+||||||.|||+... .+|.||
T Consensus 98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 98 SHDKKVWLLFDYAEHDLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred ccCceEEEEehhhhhhHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 7 788999999999999999998876655 468889999999999999999999999999999999999742 358999
Q ss_pred EecCCCccccCCCcc------cccCCCcccchhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCC---------CHHH
Q 001034 1019 VIDLGSSCFETDHLC------SYVQSRSYRAPEVILGLS-YDKKIDIWSLGCILAELCTGNVLFQND---------SPAT 1082 (1182)
Q Consensus 1019 LiDFGLA~~~~~~~s------s~vGTp~YmAPEVLlg~~-yS~kSDIWSLGVILYELLTGr~PF~g~---------d~~e 1082 (1182)
|.|||+++....... ..+-|.+|+|||+++|.. |+.++|+|++|||+.|||+-.+.|.+. -..+
T Consensus 177 IaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 177 IADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred eecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 999999987665432 346799999999999874 999999999999999999999999653 2346
Q ss_pred HHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccc-ccccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1083 LLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPK-KTSLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1083 lLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk-~~sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
.+.+|+.++|.+....|...+...++-...... .. ++..+. .....+....-++...+||.+||.+||.+|
T Consensus 257 Ql~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f-~~-------~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kR 328 (438)
T KOG0666|consen 257 QLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDF-RR-------HYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKR 328 (438)
T ss_pred HHHHHHHHcCCCccccchhhhhCcchHHHHHHh-HH-------hhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhh
Confidence 789999999988776666554443321110000 00 000000 000111122235569999999999999999
Q ss_pred CCHHHHHcCCCCCCCCCC
Q 001034 1162 PSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1162 PTAeELLqHPWFk~~~eP 1179 (1182)
+|++++|+|+||..-..|
T Consensus 329 Ita~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 329 ITAEQALEHPYFTEDPLP 346 (438)
T ss_pred ccHHHHhcccccccCCCC
Confidence 999999999999988666
No 235
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.4e-34 Score=302.12 Aligned_cols=244 Identities=22% Similarity=0.312 Sum_probs=198.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
++|++.+.||+|+||.||++..+ .+..+|+|.+.........+..|+.+++.+.| |||++++++|.....+|+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSH------PKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCC------CCceeEEEEEccCCCEEE
Confidence 46899999999999999999864 45679999987665555678889999999865 489999999999999999
Q ss_pred EEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+. |+|.+++..... .+++..+..++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++..
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~d~g~~~~ 149 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS--TGVVKVSDFGMTRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC--CCeEEECCCCCccc
Confidence 999998 467776654321 2788899999999999999999999999999999999984 67899999999875
Q ss_pred cCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1028 ETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1028 ~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... ....++..|+|||++.+..++.++|+|||||++|+|++ |++||...+....+..+......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--------- 220 (256)
T cd05114 150 VLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRL--------- 220 (256)
T ss_pred cCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCC---------
Confidence 43221 12234567999999998899999999999999999999 99999888776666665311000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. ....+..+.+||.+||+.+|.+||++.+|++
T Consensus 221 -------------------------~~---------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 221 -------------------------YR---------PKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred -------------------------CC---------CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00 0113567899999999999999999999986
No 236
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-34 Score=302.80 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=200.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.++|+++++||.|+||.||+|.. ..+..||+|.+.........+..|+.+++.++|+ ||+++++.+.....++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD------KLVRLYAVVTKEEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCchhHHHHHHHHHHHHhCCCC------CeeeEEEEEcCCCCcE
Confidence 46799999999999999999986 4567799999876655566788899999988654 8999999999999999
Q ss_pred EEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+. ++|.+++..... ..+++..+..++.||+.||.|||+.+++||||||+||+++. ++.++|+|||++.
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg~~~ 151 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSE--SLMCKIADFGLAR 151 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecC--CCcEEECCCccce
Confidence 9999997 578877764321 13788889999999999999999999999999999999994 6789999999997
Q ss_pred ccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
...... ....++..|+|||++.+..++.++|||||||++|+|++ |+.||...........+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~---------- 221 (261)
T cd05072 152 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY---------- 221 (261)
T ss_pred ecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC----------
Confidence 654321 12234667999999998889999999999999999998 999998877665554442100
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. .....++..+.+||.+||..+|++||++.++++
T Consensus 222 --------------------------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 222 --------------------------RM-------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred --------------------------CC-------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 00 011234678999999999999999999999976
No 237
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.8e-35 Score=302.30 Aligned_cols=244 Identities=30% Similarity=0.437 Sum_probs=200.2
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||.|+||.||++.+..+++.+|+|++.... .....+..|+.+++.+.| +||+++++.+.....+|+||||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~~~~lv~e~ 74 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS------PYVVKLYYSFQGKKNLYLVMEY 74 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC------cchhHHHHheecCcEEEEEEec
Confidence 689999999999999999999999997653 234566777888887764 4899999999999999999999
Q ss_pred ccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+.+ +|..++.... .+++..+..++.||+.||.|||+.+++|+||+|+|||++. ++.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~--~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 75 LPGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDS--NGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcC--CCCEEEEecccchhcccC
Confidence 985 6777765432 2889999999999999999999999999999999999995 678999999988653222
Q ss_pred -----------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1032 -----------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1032 -----------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
.....++..|+|||.+....++.++|+||||+++|+|++|..||........+..+.....+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 219 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIE------- 219 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcC-------
Confidence 22346788899999999888999999999999999999999999887776665555310000
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH---HHHHcCCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA---SDALKHPWLSHP 1176 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA---eELLqHPWFk~~ 1176 (1182)
.|. ....+..+.+||++||+.+|.+|||+ .++|+||||++.
T Consensus 220 ----------------------------~~~-------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 220 ----------------------------WPE-------DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ----------------------------CCc-------cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 000 01136889999999999999999999 999999999864
No 238
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.1e-34 Score=306.29 Aligned_cols=245 Identities=16% Similarity=0.204 Sum_probs=195.2
Q ss_pred CCEEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL---HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk---~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.+|++.+.||+|+||.||++..+ ..+..||+|+++... .....+.+|+.+++.+. ||||+++++++...
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~ 78 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFD------HSNIVRLEGVITRG 78 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCC------CCCcCeEEEEEecC
Confidence 56999999999999999999765 456789999998653 23345677888887764 55999999999999
Q ss_pred CeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++|+||||++++ |..++.... ..+++..++.++.||+.||.|||+++++||||||+|||++. ++.++|+||
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~--~~~~~l~df 151 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNS--DLVCKISGF 151 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcC--CCcEEECCC
Confidence 9999999999975 555554322 13789999999999999999999999999999999999984 678999999
Q ss_pred CCccccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1023 GSSCFETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1023 GLA~~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
|.+....... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+.....
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~----- 226 (266)
T cd05064 152 RRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR----- 226 (266)
T ss_pred cccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-----
Confidence 9875432211 12234578999999999999999999999999999775 9999988777665555421000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. .....++..+.+||.+||+.+|.+||++.+|++
T Consensus 227 -------------------------------~-------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 227 -------------------------------L-------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -------------------------------C-------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 0 011234678999999999999999999999976
No 239
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.5e-35 Score=308.18 Aligned_cols=252 Identities=21% Similarity=0.243 Sum_probs=202.0
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCC-----cEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTG-----MDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TG-----r~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
..+|++++.||.|+||.||+|.....+ ..||+|.+.... .....+.+|+.++..+.| |||+++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h------~~i~~~~~~~ 77 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH------PNIVCLLGVC 77 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC------cccceEEEEE
Confidence 357899999999999999999876554 679999987543 334557788888888764 4899999999
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhcccCC----------ccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEE
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRESGG----------EVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV 1009 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~sgg----------el~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILI 1009 (1182)
......|++|||+. ++|.+++........ ...+++..+..++.||+.||.|||+.+++|+||||+|||+
T Consensus 78 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~ 157 (283)
T cd05048 78 TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV 157 (283)
T ss_pred cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE
Confidence 99999999999998 578887765422110 1347888999999999999999999999999999999999
Q ss_pred ccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 001034 1010 KSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATL 1083 (1182)
Q Consensus 1010 Ds~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~el 1083 (1182)
+. ++.++|+|||++...... .....+++.|+|||.+....++.++|||||||++|+|++ |..||.+.+..+.
T Consensus 158 ~~--~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05048 158 GE--GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235 (283)
T ss_pred cC--CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 84 677999999998653221 223456788999999998899999999999999999998 9999998777666
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS 1163 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT 1163 (1182)
...+.... .......++.++.+||.+||+.||.+||+
T Consensus 236 ~~~i~~~~-------------------------------------------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~ 272 (283)
T cd05048 236 IEMIRSRQ-------------------------------------------LLPCPEDCPARVYALMIECWNEIPARRPR 272 (283)
T ss_pred HHHHHcCC-------------------------------------------cCCCcccCCHHHHHHHHHHccCChhhCcC
Confidence 55542100 00011245789999999999999999999
Q ss_pred HHHHHcC
Q 001034 1164 ASDALKH 1170 (1182)
Q Consensus 1164 AeELLqH 1170 (1182)
+.++++|
T Consensus 273 ~~~i~~~ 279 (283)
T cd05048 273 FKDIHTR 279 (283)
T ss_pred HHHHHHH
Confidence 9999974
No 240
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.3e-35 Score=319.92 Aligned_cols=290 Identities=19% Similarity=0.230 Sum_probs=197.3
Q ss_pred EeccC--CceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 876 YLGSA--AFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 876 ~LGkG--aFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
.||+| +||+||+|++..+++.||+|++.... ...+.+.+|+.+++.++ ||||++++++|.....+|+||
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~------h~niv~~~~~~~~~~~~~~v~ 78 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFR------HPNIMTSWTVFTTGSWLWVIS 78 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCcceEeeeEecCCceEEEE
Confidence 45666 99999999999999999999987543 22345666777776665 458999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.+ ++.+++...... .+++..+..++.||+.||.|||++||+||||||+|||++. .+.++|+||+.+....
T Consensus 79 e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~--~~~~~~~~~~~~~~~~ 152 (328)
T cd08226 79 PFMAYGSANSLLKTYFPE----GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG--DGLVSLSGLSHLYSLV 152 (328)
T ss_pred ecccCCCHHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC--CCcEEEechHHHhhhh
Confidence 99995 677666544221 2788899999999999999999999999999999999984 6789999998543211
Q ss_pred C---C-------cccccCCCcccchhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1030 D---H-------LCSYVQSRSYRAPEVILGL--SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1030 ~---~-------~ss~vGTp~YmAPEVLlg~--~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
. . .....++..|+|||++.+. .++.++|||||||++|+|++|.+||........+..++......|..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd08226 153 RNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLD 232 (328)
T ss_pred ccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcc
Confidence 1 0 1112345679999999764 57899999999999999999999998876655554443322211111
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhh----ccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEY----LIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~----liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.................. ........... ..............++..+++||++||++||.+|||+.++|+||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 233 ITTFPCEESRMKNSQSGV-DSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred ccccchhhhhhccchhhh-hcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 000000000000000000 00000000000 0000000001122356789999999999999999999999999999
Q ss_pred CCCCC
Q 001034 1174 SHPYE 1178 (1182)
Q Consensus 1174 k~~~e 1178 (1182)
....+
T Consensus 312 ~~~~~ 316 (328)
T cd08226 312 KQVKE 316 (328)
T ss_pred HHHHH
Confidence 76544
No 241
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.6e-34 Score=309.00 Aligned_cols=254 Identities=26% Similarity=0.435 Sum_probs=205.9
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
.|...+.||.|+||.||++.+..+++.+|+|++.... .....+.+|+.+++.+.| +||++++++|....+.|+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h------~~vv~~~~~~~~~~~~~~ 93 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH------PNIVEMYSSYLVGDELWV 93 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC------CChheEEEEEEcCCeEEE
Confidence 3555679999999999999999999999999986543 233456778888888754 489999999999999999
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|+||+.+ +|.+++.. . .++...+..++.||+.||.|||++||+||||+|+||+++. ++.++|+|||++..
T Consensus 94 v~e~~~~~~L~~~~~~-~------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~d~g~~~~ 164 (285)
T cd06648 94 VMEFLEGGALTDIVTH-T------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS--DGRVKLSDFGFCAQ 164 (285)
T ss_pred EEeccCCCCHHHHHHh-C------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcC--CCcEEEcccccchh
Confidence 9999985 56665543 1 2788899999999999999999999999999999999984 67899999998764
Q ss_pred cCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1028 ETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1028 ~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
.... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...++...+.++..... +
T Consensus 165 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~--~--------- 233 (285)
T cd06648 165 VSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP--P--------- 233 (285)
T ss_pred hccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC--C---------
Confidence 3322 2234688999999999988899999999999999999999999988776665555431100 0
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
. ......++..+.+||++||.++|.+|||+.++|+||||+..-.|
T Consensus 234 --------------------------~----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~ 278 (285)
T cd06648 234 --------------------------K----LKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPP 278 (285)
T ss_pred --------------------------C----CcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCc
Confidence 0 00112346789999999999999999999999999999887654
No 242
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.2e-34 Score=302.50 Aligned_cols=247 Identities=26% Similarity=0.375 Sum_probs=192.5
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
..||+|+||.||++.+..++..||+|.+.... .....+.+|+.+++.++|+ ||+++++++......++||||+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~------~iv~~~~~~~~~~~~~lv~e~~ 87 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHR------NIVQYLGSDSENGFFKIFMEQV 87 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCC------CeeeeeeeeccCCEEEEEEecC
Confidence 47999999999999999999999999887543 3445677888988887654 8999999999999999999999
Q ss_pred cc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC--
Q 001034 954 KA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD-- 1030 (1182)
Q Consensus 954 ~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~-- 1030 (1182)
.+ +|..++..... ....+...+..++.||+.||.|||+.||+||||||+|||++. ..+.++|+|||++.....
T Consensus 88 ~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~-~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 88 PGGSLSALLRSKWG---PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred CCCCHHHHHHHhcc---cCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC-CCCeEEEecchhheecccCC
Confidence 85 67766654321 111377888999999999999999999999999999999974 346799999999865422
Q ss_pred -CcccccCCCcccchhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhhcCCcchhhhhcccccc
Q 001034 1031 -HLCSYVQSRSYRAPEVILGLS--YDKKIDIWSLGCILAELCTGNVLFQNDSPAT-LLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1031 -~~ss~vGTp~YmAPEVLlg~~--yS~kSDIWSLGVILYELLTGr~PF~g~d~~e-lLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
......+++.|+|||++.... ++.++|+||||+++|+|++|++||....... ....+. ..
T Consensus 164 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~-~~--------------- 227 (268)
T cd06624 164 PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVG-MF--------------- 227 (268)
T ss_pred CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhh-hh---------------
Confidence 122345788999999987643 7899999999999999999999996432211 100000 00
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
...+ ......+..+.+||.+||..+|.+|||+.+++.||||
T Consensus 228 --------------------~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 228 --------------------KIHP------EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred --------------------ccCC------CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 0000 0112346789999999999999999999999999997
No 243
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=2.4e-34 Score=312.62 Aligned_cols=251 Identities=24% Similarity=0.371 Sum_probs=204.4
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.|...+.||.|+||.||+|++..+++.||+|++.... .....+..|+.+++.++| +|++++++++.....
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~ 95 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH------PNTIEYKGCYLKEHT 95 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC------CCCccEEEEEEeCCE
Confidence 3677788999999999999999999999999987432 233456778888888764 489999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
.|+||||+.+++..++..... .+++..+..++.||+.||.|||++|++|+||+|+||+++. ++.+||+|||++
T Consensus 96 ~~lv~e~~~~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~--~~~~kL~dfg~~ 168 (313)
T cd06633 96 AWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGSA 168 (313)
T ss_pred EEEEEecCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECC--CCCEEEeecCCC
Confidence 999999999998888765332 2788899999999999999999999999999999999984 677999999998
Q ss_pred cccCCCcccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDHLCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
.... ......++..|+|||++. ...++.++|||||||++|+|++|.+||...+....+..+... ..
T Consensus 169 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~-------- 237 (313)
T cd06633 169 SKSS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DS-------- 237 (313)
T ss_pred cccC-CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CC--------
Confidence 6533 233557889999999984 456889999999999999999999999887665554444210 00
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+. ......+..+.+||.+||+++|.+||++.++|.||||...
T Consensus 238 ---------------------------~~-----~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 238 ---------------------------PT-----LQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred ---------------------------CC-----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 00 0112235679999999999999999999999999999863
No 244
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-36 Score=306.91 Aligned_cols=281 Identities=28% Similarity=0.434 Sum_probs=233.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.|.-+++||+|.||+||++++..+++.||+|.++.+. ......++|+-+|+.+.|. |||++++.......+
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhk------nivrl~dvlhsdkkl 76 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK------NIVRLHDVLHSDKKL 76 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhc------ceeehhhhhccCcee
Confidence 4556678999999999999999999999999998653 3345678999999999877 899999999999999
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
.+|+||+...|..++..... .+....++.++.|++++|.|+|++++.||||||.|+||+. +|.+||.|||+++
T Consensus 77 tlvfe~cdqdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~--ngelkladfglar 149 (292)
T KOG0662|consen 77 TLVFEFCDQDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR--NGELKLADFGLAR 149 (292)
T ss_pred EEeHHHhhHHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc--CCcEEecccchhh
Confidence 99999999999888876542 2888999999999999999999999999999999999994 8889999999998
Q ss_pred ccCCCc---ccccCCCcccchhhhcCCC-CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETDHL---CSYVQSRSYRAPEVILGLS-YDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~~~---ss~vGTp~YmAPEVLlg~~-yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
-.+-+. ...+-|.+|++|.++.+.+ |+...|+||.|||+.|+.. |++.|.+.+..+++.+|...+|.+.+.-|..
T Consensus 150 afgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps 229 (292)
T KOG0662|consen 150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPS 229 (292)
T ss_pred hcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCc
Confidence 655443 2346699999999998865 8999999999999999986 9999999999999999999999877655544
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYE 1178 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~e 1178 (1182)
......| ..++.... ..++....++.+..-++|+.++|.-+|.+|++|+.+|+||||++.-.
T Consensus 230 ~t~lpdy-----k~yp~ypa----------ttswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s~ 291 (292)
T KOG0662|consen 230 MTKLPDY-----KPYPIYPA----------TTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFSP 291 (292)
T ss_pred cccCCCC-----cccCCccc----------cchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccCC
Confidence 3322221 22222222 22333344555667889999999999999999999999999998643
No 245
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-36 Score=339.14 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=215.5
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
+..+.|+.-++||+|+||+|+-|+.+.||+-||+|.+.+.+ ......++|..||..++.+ +||.|-+.|+
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~------FiVslaYAfe 255 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSP------FIVSLAYAFE 255 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccC------cEEEEeeeec
Confidence 44567888899999999999999999999999999886543 3345678899999999766 9999999999
Q ss_pred ecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 942 YREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 942 d~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
.+..+|+||..|.|+.+.|+.++....+ |++..+++|+++|+.||++||+.+||+|||||+|||+| .+|+|+|+|
T Consensus 256 Tkd~LClVLtlMNGGDLkfHiyn~g~~g---F~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD--d~GhvRISD 330 (591)
T KOG0986|consen 256 TKDALCLVLTLMNGGDLKFHIYNHGNPG---FDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD--DHGHVRISD 330 (591)
T ss_pred CCCceEEEEEeecCCceeEEeeccCCCC---CchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec--cCCCeEeec
Confidence 9999999999999998888887754333 99999999999999999999999999999999999999 589999999
Q ss_pred CCCccccC--CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1022 LGSSCFET--DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1022 FGLA~~~~--~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
+|+|+-.. +.....+||..|||||++....|+...|||||||+||+|+.|+.||.......--..+
T Consensus 331 LGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEv------------ 398 (591)
T KOG0986|consen 331 LGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEV------------ 398 (591)
T ss_pred cceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHH------------
Confidence 99998544 3445569999999999999999999999999999999999999999654322111111
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHcCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALKHPWLS 1174 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLqHPWFk 1174 (1182)
.+.... .-.......++++++|.+.+|+.||.+|+ .+.++-+||||+
T Consensus 399 -----------------drr~~~-----------~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk 450 (591)
T KOG0986|consen 399 -----------------DRRTLE-----------DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFK 450 (591)
T ss_pred -----------------HHHHhc-----------chhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccc
Confidence 000000 00112245689999999999999999996 467999999998
Q ss_pred CC
Q 001034 1175 HP 1176 (1182)
Q Consensus 1175 ~~ 1176 (1182)
..
T Consensus 451 ~l 452 (591)
T KOG0986|consen 451 DL 452 (591)
T ss_pred cC
Confidence 74
No 246
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=350.34 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=216.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc-chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN-KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~-k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
+-|+|+..||.|+||.||+|+.+.++-..|.|+|... ......++-|+.||..+. ||+||+|++.|...+.++
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd------HP~ivkLl~ayy~enkLw 105 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD------HPVIVKLLSAYYFENKLW 105 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC------ChHHHHHHHHHhccCceE
Confidence 5588999999999999999999999999999998643 455678888999998875 559999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|+.|||+|+..+.+-..... .+++.+++.+++|++.||.|||+++|||||||..|||+.. +|.|+|.|||.+..
T Consensus 106 iliEFC~GGAVDaimlEL~r----~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tl--dGdirLADFGVSAK 179 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGR----VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTL--DGDIRLADFGVSAK 179 (1187)
T ss_pred EEEeecCCchHhHHHHHhcc----ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEe--cCcEeeeccccccc
Confidence 99999999877766544322 3999999999999999999999999999999999999995 78899999998754
Q ss_pred cC---CCcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1028 ET---DHLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1028 ~~---~~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
.. ....+++|||+|||||++. ..+|++++||||||++|.||.-+.+|-...++..++-+|...- +|. ++
T Consensus 180 n~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSe--PPT-Ll 256 (1187)
T KOG0579|consen 180 NKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE--PPT-LL 256 (1187)
T ss_pred chhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcC--CCc-cc
Confidence 32 3456889999999999974 4689999999999999999999999999999988887774221 111 11
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
. ...-+..|.|||.+||..||..||++.+||+||||+..
T Consensus 257 q--------------------------------------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 257 Q--------------------------------------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred C--------------------------------------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 0 11225689999999999999999999999999999864
No 247
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.9e-34 Score=296.70 Aligned_cols=245 Identities=22% Similarity=0.327 Sum_probs=199.3
Q ss_pred EEeccCCceEEEEEEECCC---CcEEEEEEEeccchh--hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHT---GMDVCVKIIKNNKDF--FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~T---Gr~VAVKIIkk~k~~--~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||+|+||.||+|.+... +..||+|+++..... ...+..|+.+++.+.| ++|+++++++.....+++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH------PNVVRLLGVCTEEEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC------CChheeeeeecCCCceEEE
Confidence 3689999999999998866 899999999876433 5677788888888864 4899999999999999999
Q ss_pred EEecc-cChHHHHhhhccc---CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 950 CELLK-ANLYEFHKFNRES---GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 950 mEyL~-GsLld~Lk~~~~s---ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|||+. ++|.+++...... .....+++..++.++.||+.||.|||+++|+|+||+|+||+++. ++.++|+|||.+
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~--~~~~~l~dfg~~ 152 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGE--DLVVKISDFGLS 152 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECC--CCcEEEcccccc
Confidence 99995 6788877654210 00123899999999999999999999999999999999999995 578999999998
Q ss_pred cccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1026 CFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1026 ~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
...... .....+++.|+|||.+....++.++|+|||||++|+|++ |..||........+..+.. +.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~------ 224 (262)
T cd00192 153 RDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GY------ 224 (262)
T ss_pred cccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CC------
Confidence 765432 334566889999999998899999999999999999999 6999988877666555531 00
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.......++..+.++|.+||+.+|.+|||+.++++|
T Consensus 225 -----------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 225 -----------------------------------RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred -----------------------------------CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 000112336889999999999999999999999975
No 248
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.7e-34 Score=301.63 Aligned_cols=249 Identities=17% Similarity=0.245 Sum_probs=194.8
Q ss_pred EEEEEEeccCCceEEEEEEECCC---CcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHT---GMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~T---Gr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
|++.+.||+|+||.||+|....+ +..||+|+++... .....+..|+.+++.+.| +||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDH------PNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCC------CCeeeEEeeeccCC
Confidence 56788999999999999987653 4789999997542 334567788888888764 48999999876654
Q ss_pred e------EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 945 H------LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 945 ~------LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
. .++||||+.+ +|..++...........+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.+
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~--~~~~ 152 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRE--DMTV 152 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECC--CCeE
Confidence 3 8999999985 66666654432222335889999999999999999999999999999999999984 6789
Q ss_pred EEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc
Q 001034 1018 KVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~il 1091 (1182)
||+|||+++...... .....+..|+|||.+.+..++.++|||||||++|||++ |.+||.+....+.+..+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05035 153 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN 232 (273)
T ss_pred EECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987543221 12234678999999988899999999999999999999 999998877665554442100
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. .......+..+.+||.+||+.||.+|||+.+++++
T Consensus 233 ~-------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 233 R-------------------------------------------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred C-------------------------------------------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 00112346789999999999999999999999874
No 249
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.9e-34 Score=300.24 Aligned_cols=250 Identities=24% Similarity=0.345 Sum_probs=198.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||.|+||.||+|+++.+++.||||.++.. ......+..|+.+++.+.| |||++++++|....
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~ 75 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH------PNVIKYLDSFIEDN 75 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC------cceeeeeeeEEECC
Confidence 5799999999999999999999999999999988642 2333456778888888865 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..++||||+.+ +|..++...... ...+++..+..++.||+.||.|||+++++|+||||+|||++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~--~~~~~l~d~g 151 (267)
T cd08228 76 ELNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcC--CCCEEECccc
Confidence 99999999995 676666543221 123788889999999999999999999999999999999984 6779999999
Q ss_pred CccccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhcCCcchhh
Q 001034 1024 SSCFETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP--ATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1024 LA~~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~--~elLakIv~ilGp~Peem 1098 (1182)
++....... ....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||..... ......+. ..+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~--- 227 (267)
T cd08228 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPP--- 227 (267)
T ss_pred cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCC---
Confidence 987644322 235678899999999998899999999999999999999999976432 22222221 000000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
......+..+.+||.+||..+|.+||++.++|+.
T Consensus 228 --------------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 228 --------------------------------------LPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred --------------------------------------CChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 0011345789999999999999999999999973
No 250
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=310.19 Aligned_cols=237 Identities=19% Similarity=0.228 Sum_probs=194.2
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe----cCeE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY----REHL 946 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd----~e~L 946 (1182)
..|+.|+++.||++.. +|+.||||+++.... ....+.+|+.+|++++|+ ||++++++|.+ ...+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~------nIv~~~g~~~~~~~~~~~~ 97 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN------NILKIYGFIIDIVDDLPRL 97 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCC------CEEEEeeeEEecccCCCce
Confidence 3689999999999986 789999999976432 245667899999998655 89999999987 3578
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
++||||+.+ +|.+++.... .+++.....++.+++.||.|||+ .+++||||||+|||++. ++.+||+|||+
T Consensus 98 ~lv~Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~--~~~~kl~dfg~ 169 (283)
T PHA02988 98 SLILEYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTE--NYKLKIICHGL 169 (283)
T ss_pred EEEEEeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECC--CCcEEEcccch
Confidence 999999996 5777765432 27888899999999999999998 59999999999999994 67899999999
Q ss_pred ccccCCCcccccCCCcccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1025 SCFETDHLCSYVQSRSYRAPEVILG--LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1025 A~~~~~~~ss~vGTp~YmAPEVLlg--~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
+...........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..++.....+
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~-------- 241 (283)
T PHA02988 170 EKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSL-------- 241 (283)
T ss_pred HhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC--------
Confidence 9866555556678999999999976 689999999999999999999999999877766665553110000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. ....+..+.+||.+||+.||.+|||+.+||+
T Consensus 242 -------------------------~~---------~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 242 -------------------------KL---------PLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred -------------------------CC---------CCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 00 1134678999999999999999999999986
No 251
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.6e-34 Score=305.66 Aligned_cols=259 Identities=20% Similarity=0.269 Sum_probs=201.2
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLH-----TGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~-----TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
..++|++.+.||+|+||.||+|..+. .+..||+|.+..... ....+.+|+.+++.+.| +||++++++
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~ 77 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC------HHVVRLLGV 77 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC------CCeeeEEEE
Confidence 35789999999999999999997542 356899998865432 22345667777777754 489999999
Q ss_pred EEecCeEEEEEEecc-cChHHHHhhhccc----CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC
Q 001034 940 FYYREHLLIVCELLK-ANLYEFHKFNRES----GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR 1014 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~-GsLld~Lk~~~~s----ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d 1014 (1182)
+......|+||||+. |+|.+++...... .+...++...+..++.||+.||.|||+++|+||||||+|||++. +
T Consensus 78 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~--~ 155 (288)
T cd05061 78 VSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH--D 155 (288)
T ss_pred EcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC--C
Confidence 999999999999998 5788777643211 11223567788899999999999999999999999999999994 6
Q ss_pred ceEEEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 001034 1015 CEVKVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1015 G~IKLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv 1088 (1182)
+.++|+|||+++...... ....++..|+|||.+.+..++.++|+|||||++|+|++ |.+||.+....+.+..+.
T Consensus 156 ~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 156 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred CcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 789999999987533211 12234677999999999899999999999999999998 789998777665554442
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
.. .. + ......+..+.+||.+||+.||.+|||+.+++
T Consensus 236 ~~--~~-----------------------------------~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll 272 (288)
T cd05061 236 DG--GY-----------------------------------L------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 272 (288)
T ss_pred cC--CC-----------------------------------C------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 10 00 0 00112357899999999999999999999998
Q ss_pred c------CCCCCCC
Q 001034 1169 K------HPWLSHP 1176 (1182)
Q Consensus 1169 q------HPWFk~~ 1176 (1182)
+ ||||...
T Consensus 273 ~~l~~~~~~~~~~~ 286 (288)
T cd05061 273 NLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHhhcCCCCCCC
Confidence 7 9999764
No 252
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.7e-34 Score=306.74 Aligned_cols=256 Identities=29% Similarity=0.454 Sum_probs=211.2
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..+.|++.+.||.|+||.||++.+..++..||+|++.........+..|+.+++.+.|+ ||+++++.|.....+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHP------NIVDYYDSYLVGDEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCC------CeeEEEEEEEECCEE
Confidence 44668899999999999999999988999999999987654456677888888888654 899999999999999
Q ss_pred EEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+|+||+. ++|.+++.... ..++...+..++.||+.||.|||+.||+|+||+|+||+++. ++.++|+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~--~~~~~l~d~~~~ 163 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK--DGSVKLADFGFA 163 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcC--CCCEEECccchh
Confidence 99999999 57888776543 13888999999999999999999999999999999999994 678999999987
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||++.+..++.++|+|||||++|+|++|+.||...++......+... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~--~~-------- 233 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTK--GI-------- 233 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--CC--------
Confidence 654322 22345788999999999889999999999999999999999999877765544443210 00
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+.. .....++..+.+||.+||+.+|.+|||+.++|+||||+..
T Consensus 234 ---------------------------~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 234 ---------------------------PPL----KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred ---------------------------CCC----cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 000 0011246789999999999999999999999999999874
No 253
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-34 Score=296.95 Aligned_cols=251 Identities=28% Similarity=0.383 Sum_probs=204.4
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+|++.+.||.|+||.||++.+..+++.+|+|.+.... .....+..|+.+++.++| +||++++++|......
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~ 74 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH------PNIISYKEAFLDGNKL 74 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC------CCchhhhhhhccCCEE
Confidence 5899999999999999999999999999999997642 233456678888887764 4899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+++ +|..++...... ...+++..+..++.||+.||.|||+.|++|+||+|.||+++. .+.+||+|||++
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~--~~~~kl~d~g~~ 150 (256)
T cd08530 75 CIVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVA--NDLVKIGDLGIS 150 (256)
T ss_pred EEEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEec--CCcEEEeeccch
Confidence 999999975 677766553321 123788899999999999999999999999999999999995 677999999998
Q ss_pred cccCCC-cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1026 CFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1026 ~~~~~~-~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|+.||...+.......+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~------------- 217 (256)
T cd08530 151 KVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK------------- 217 (256)
T ss_pred hhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC-------------
Confidence 765433 223467889999999999999999999999999999999999998777655443332100
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.+ ......+.+++++|.+||..+|.+|||+.++|+||++
T Consensus 218 ------------------------~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 218 ------------------------YP------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred ------------------------CC------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 00 0111346789999999999999999999999999985
No 254
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.4e-35 Score=311.90 Aligned_cols=248 Identities=28% Similarity=0.394 Sum_probs=199.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+.| +||+++++.|....++|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~ 78 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS------PYITRYYGSYLKGTKLW 78 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC------CccHhhhcccccCCceE
Confidence 4666778999999999999999999999999987542 334566778888887754 58999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+++ +|..++... .+++..++.++.||+.||.|||+.+++|+||+|+||+++. ++.++|+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~--~~~~~l~dfg~~~ 149 (277)
T cd06642 79 IIMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSE--QGDVKLADFGVAG 149 (277)
T ss_pred EEEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeC--CCCEEEccccccc
Confidence 99999996 555554321 2788899999999999999999999999999999999984 6779999999987
Q ss_pred ccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
..... .....++..|+|||++.+..++.++|+|||||++|+|++|..||....+......+...
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~------------- 216 (277)
T cd06642 150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN------------- 216 (277)
T ss_pred cccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcC-------------
Confidence 54432 22346788999999999989999999999999999999999999765543322221000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
..+ ......+..+.+||.+||+.+|.+||++.++|+||||..
T Consensus 217 ------------------------~~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 217 ------------------------SPP------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred ------------------------CCC------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 000 011134678999999999999999999999999999964
No 255
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.5e-34 Score=303.59 Aligned_cols=254 Identities=20% Similarity=0.243 Sum_probs=200.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLH-----TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~-----TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.+.|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .....+..|+.+++.+.| +||+++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~ 78 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH------QNIVRLIGVS 78 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC------CCEeeEEEEE
Confidence 4679999999999999999999877 78899999886543 223457778888888765 4899999999
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhcccC-CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC-CceE
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRESG-GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS-RCEV 1017 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~sg-gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~-dG~I 1017 (1182)
......|+||||+. ++|.+++....... ....+++..+..++.||+.||.|||+++++||||||+|||++..+ ...+
T Consensus 79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence 99999999999997 57887776543211 112488899999999999999999999999999999999998533 2469
Q ss_pred EEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc
Q 001034 1018 KVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~il 1091 (1182)
||+|||+++...... .....+..|+|||++.+..++.++|||||||++|+|++ |..||.+.+....+..+....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 238 (277)
T cd05036 159 KIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGG 238 (277)
T ss_pred EeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence 999999987653221 12233567999999999999999999999999999997 999998877665544432100
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. . .....++..+.+||.+||+.+|++||++.+||+|
T Consensus 239 -~-------------------------------~-----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 239 -R-------------------------------L-----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred -c-------------------------------C-----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 0 0012346789999999999999999999999986
No 256
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-34 Score=311.10 Aligned_cols=254 Identities=27% Similarity=0.424 Sum_probs=203.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.++|.+.+.||.|+||.||++.+..+++.||+|.+.... .....+..|+.+++.+. ||||++++++|......
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------hp~i~~~~~~~~~~~~~ 91 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENK------HPNIVNYLDSYLVGDEL 91 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcC------CCCeeehhheeeeCCcE
Confidence 478999999999999999999999999999999986432 33456677888877765 44899999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+|+||+.+ +|..++... .+++..+..++.||+.||.|||++|++|+||+|+||+++. ++.++|+|||++
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~--~~~~kL~dfg~~ 162 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--DGSVKLTDFGFC 162 (293)
T ss_pred EEEEecCCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcC--CCCEEEccCcce
Confidence 999999985 666665432 2678889999999999999999999999999999999984 678999999987
Q ss_pred cccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1026 CFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1026 ~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... .....+++.|+|||++....++.++|+|||||++|+|++|+.||...+....+..+.. +.
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~--~~--------- 231 (293)
T cd06647 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT--NG--------- 231 (293)
T ss_pred ecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc--CC---------
Confidence 643322 2234678899999999988899999999999999999999999987654332221100 00
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.+. .......+..+.+||++||..+|.+||++.+++.||||+...
T Consensus 232 --------------------------~~~----~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 232 --------------------------TPE----LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred --------------------------CCC----CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 000 001112467899999999999999999999999999998664
No 257
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.5e-34 Score=302.98 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=197.9
Q ss_pred eecCCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD 938 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d 938 (1182)
+..++|++.+.||+|+||.||++.+. .++..||+|++.... .....+.+|+.+++.+.| +||+++++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~------~~iv~~~~ 76 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC------HHVVRLLG 76 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCeeeEEE
Confidence 34678999999999999999999864 345779999986543 223456778888887754 48999999
Q ss_pred EEEecCeEEEEEEeccc-ChHHHHhhhcccC----CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC
Q 001034 939 YFYYREHLLIVCELLKA-NLYEFHKFNRESG----GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS 1013 (1182)
Q Consensus 939 sFqd~e~LyLVmEyL~G-sLld~Lk~~~~sg----gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~ 1013 (1182)
++......++||||+.+ +|.+++....... ....++...+..++.||+.||.|||+.+++|+||||+|||++.
T Consensus 77 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~-- 154 (277)
T cd05062 77 VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE-- 154 (277)
T ss_pred EEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC--
Confidence 99999999999999985 6777765432110 1123577788999999999999999999999999999999994
Q ss_pred CceEEEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 001034 1014 RCEVKVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARV 1087 (1182)
Q Consensus 1014 dG~IKLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakI 1087 (1182)
++.++|+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+....+..+
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234 (277)
T ss_pred CCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 6789999999986433221 12344678999999999999999999999999999999 78999887766555444
Q ss_pred HhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHH
Q 001034 1088 IGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDA 1167 (1182)
Q Consensus 1088 v~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeEL 1167 (1182)
..... .......+..+.+||.+||+.+|.+|||+.++
T Consensus 235 ~~~~~-------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 271 (277)
T cd05062 235 MEGGL-------------------------------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 271 (277)
T ss_pred HcCCc-------------------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 21000 00011235789999999999999999999999
Q ss_pred HcC
Q 001034 1168 LKH 1170 (1182)
Q Consensus 1168 LqH 1170 (1182)
+++
T Consensus 272 l~~ 274 (277)
T cd05062 272 ISS 274 (277)
T ss_pred HHH
Confidence 875
No 258
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.4e-34 Score=308.18 Aligned_cols=255 Identities=26% Similarity=0.369 Sum_probs=200.4
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.+.|++.+.||.|+||.||+|.+..+++.||||+++... .....+..|+.++..+. .|+||++++++|.....
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVKCYGYFITDSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhcc-----CCCchHhhheeeecCCe
Confidence 467999999999999999999999899999999997643 22334455665554442 36699999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+.+.+..++..... .+++..+..++.||+.||.|||+ .+|+||||+|+|||++. ++.+||+|||+
T Consensus 89 ~~~v~e~~~~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~--~~~~kL~dfg~ 161 (296)
T cd06618 89 VFICMELMSTCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDA--SGNVKLCDFGI 161 (296)
T ss_pred EEEEeeccCcCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcC--CCCEEECcccc
Confidence 999999998877777655322 38888999999999999999997 69999999999999984 67899999999
Q ss_pred ccccCCC--cccccCCCcccchhhhcCCC----CCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhhcCCcchh
Q 001034 1025 SCFETDH--LCSYVQSRSYRAPEVILGLS----YDKKIDIWSLGCILAELCTGNVLFQNDSP-ATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1025 A~~~~~~--~ss~vGTp~YmAPEVLlg~~----yS~kSDIWSLGVILYELLTGr~PF~g~d~-~elLakIv~ilGp~Pee 1097 (1182)
+...... .....++..|+|||++.+.. ++.++|||||||++|+|++|+.||..... .+.+.+++....
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----- 236 (296)
T cd06618 162 SGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP----- 236 (296)
T ss_pred chhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC-----
Confidence 8754322 22335678899999997654 88899999999999999999999975322 233333221000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
+.. .....++.++.+||.+||..||.+||++.++++||||..
T Consensus 237 --------------------------------~~~----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 237 --------------------------------PSL----PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred --------------------------------CCC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 000 001134678999999999999999999999999999975
No 259
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=338.81 Aligned_cols=263 Identities=26% Similarity=0.381 Sum_probs=210.1
Q ss_pred eCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhh--------HHHHHHHHHHHHhcCCCCCCCcceE
Q 001034 863 LNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFF--------DQSLDEIKLLKYVNKHDPGDKYHLL 934 (1182)
Q Consensus 863 ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~--------dq~l~EikILr~L~h~~~l~HPnIV 934 (1182)
...++.+||.++.+||+|+|++||+|+|...+++||||+...++.|. .+..+|.+|.+.| +||.||
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL------DHpRIV 530 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL------DHPRIV 530 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc------Ccceee
Confidence 34678899999999999999999999999999999999998766553 3445566665555 555899
Q ss_pred EEEEEEEec-CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc--CccccccCCccEEEcc
Q 001034 935 RLYDYFYYR-EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL--GLIHCDLKPENILVKS 1011 (1182)
Q Consensus 935 kL~dsFqd~-e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~--GIIHRDIKPeNILIDs 1011 (1182)
++|++|..+ ..+|-|+|||+|+.++|+...... +++.+++.|+.||+.||.||.+. .|||.||||.|||+..
T Consensus 531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN 605 (775)
T ss_pred eeeeeeeeccccceeeeeecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence 999999865 679999999999988888766543 89999999999999999999976 4999999999999974
Q ss_pred C-CCceEEEecCCCccccCCC----------cccccCCCcccchhhhcCC----CCCchhhHHHHHHHHHHHHhCCCCCC
Q 001034 1012 Y-SRCEVKVIDLGSSCFETDH----------LCSYVQSRSYRAPEVILGL----SYDKKIDIWSLGCILAELCTGNVLFQ 1076 (1182)
Q Consensus 1012 ~-~dG~IKLiDFGLA~~~~~~----------~ss~vGTp~YmAPEVLlg~----~yS~kSDIWSLGVILYELLTGr~PF~ 1076 (1182)
. .-|.|||+|||++++.... .....||.+|++||+|.-+ +++.++||||+|||+|.+|.|+.||.
T Consensus 606 GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFG 685 (775)
T KOG1151|consen 606 GTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFG 685 (775)
T ss_pred CcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCC
Confidence 2 3468999999999875543 2346789999999999643 47899999999999999999999997
Q ss_pred CCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhccc
Q 001034 1077 NDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEI 1156 (1182)
Q Consensus 1077 g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~ 1156 (1182)
.+-...-+-+--.+ ....+..+| .-|.++.++.+||++||.+
T Consensus 686 hnqsQQdILqeNTI-------------------------------lkAtEVqFP-------~KPvVsseAkaFIRRCLaY 727 (775)
T KOG1151|consen 686 HNQSQQDILQENTI-------------------------------LKATEVQFP-------PKPVVSSEAKAFIRRCLAY 727 (775)
T ss_pred CchhHHHHHhhhch-------------------------------hcceeccCC-------CCCccCHHHHHHHHHHHHh
Confidence 65433211111000 000111222 2356789999999999999
Q ss_pred CCCCCCCHHHHHcCCCCC
Q 001034 1157 NPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1157 DPekRPTAeELLqHPWFk 1174 (1182)
--+.|..+.+|..||+|-
T Consensus 728 RKeDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 728 RKEDRIDVQQLACDPYLL 745 (775)
T ss_pred hhhhhhhHHHHccCcccc
Confidence 999999999999999994
No 260
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.5e-34 Score=298.27 Aligned_cols=239 Identities=28% Similarity=0.447 Sum_probs=199.9
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
||.|+||.||++.+..+++.+|+|++.+... ....+..|+.+++.+.| ++|+++++.+.....+|+||||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~~v~e~ 74 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH------PFIVKLHYAFQTEEKLYLVLEY 74 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC------CcHHHHHHHeecCCeeEEEEec
Confidence 6999999999999998999999999976532 34567788888888864 4899999999999999999999
Q ss_pred cc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+. ++|.+++.... .+++..+..++.||+.||.|||+.+++|+||+|+||+++. .+.++|+|||++......
T Consensus 75 ~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~--~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 75 APGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA--DGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcC--CCcEEEeecCcceecccC
Confidence 95 67877776543 2788999999999999999999999999999999999985 677999999998765432
Q ss_pred ---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchh
Q 001034 1032 ---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKY 1108 (1182)
Q Consensus 1032 ---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~ 1108 (1182)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+.....
T Consensus 147 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------------- 210 (250)
T cd05123 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPL---------------- 210 (250)
T ss_pred CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC----------------
Confidence 3445678899999999988899999999999999999999999987776555555431000
Q ss_pred hcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH---HHHHcCCCC
Q 001034 1109 FTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA---SDALKHPWL 1173 (1182)
Q Consensus 1109 F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA---eELLqHPWF 1173 (1182)
......+..+.+||++||..||.+||++ .++++||||
T Consensus 211 ----------------------------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 211 ----------------------------RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred ----------------------------CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 0111226789999999999999999999 999999998
No 261
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.4e-34 Score=300.96 Aligned_cols=245 Identities=22% Similarity=0.322 Sum_probs=198.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
.+|++.+.||.|+||.||++.++ ++..+|+|++.........+.+|+.+++.+.| +||+++++++......|+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH------PNLVQLYGVCTKQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCC------CCEEEEEEEEcCCCceEE
Confidence 35889999999999999999875 56789999987655445567789999888754 589999999999999999
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+++ +|.+++..... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+|||++..
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~--~~~~kl~dfg~~~~ 149 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE--DNVVKVSDFGLARY 149 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC--CCcEEECCccccee
Confidence 9999975 67777764322 3889999999999999999999999999999999999994 67899999999875
Q ss_pred cCCCcc-c---ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1028 ETDHLC-S---YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1028 ~~~~~s-s---~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... . ..++..|+|||.+.+..++.++|+|||||++|+|++ |.+||...+..+....+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------- 219 (256)
T cd05059 150 VLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR---------- 219 (256)
T ss_pred cccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc----------
Confidence 433221 1 123457999999999999999999999999999999 8999987766655544421000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. ......+..+.+||.+||..+|.+|||+.++++.
T Consensus 220 --------------------------~-------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 220 --------------------------L-------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred --------------------------C-------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 0 0112357889999999999999999999999974
No 262
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.1e-34 Score=310.83 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=205.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
..|.+.+.||.|+||.||++++..++..||+|++.... .....+..|+.+++.+.|+ |++++++++....
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~iv~~~~~~~~~~ 98 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHP------NSIEYKGCYLREH 98 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCC------CEEEEEEEEeeCC
Confidence 44788889999999999999999999999999987532 2334567788888877654 8999999999999
Q ss_pred eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 945 HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 945 ~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
..|+||||+.|++.+++..... .+++..+..++.||+.||.|||+.+|+||||+|+||+++. ++.++|+|||+
T Consensus 99 ~~~lv~e~~~g~l~~~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~--~~~~kl~dfg~ 171 (317)
T cd06635 99 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTE--PGQVKLADFGS 171 (317)
T ss_pred eEEEEEeCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECC--CCCEEEecCCC
Confidence 9999999999988887764432 2788999999999999999999999999999999999984 67899999999
Q ss_pred ccccCCCcccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1025 SCFETDHLCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1025 A~~~~~~~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+..... .....+++.|+|||++. ...++.++|||||||++|+|++|++||...+....+..+.....+
T Consensus 172 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~-------- 242 (317)
T cd06635 172 ASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP-------- 242 (317)
T ss_pred ccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC--------
Confidence 865433 33457888999999984 456889999999999999999999999876655554444211000
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.......+..+++||.+||+.+|.+||++.++++|||+...
T Consensus 243 ----------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 243 ----------------------------------TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred ----------------------------------CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 00011345789999999999999999999999999998553
No 263
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3.2e-34 Score=298.03 Aligned_cols=238 Identities=22% Similarity=0.311 Sum_probs=189.8
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
.||.|+||.||+|.++.+++.||+|.+... ......+.+|+.+++.+.| +||++++++|.....+|+||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~lv~e~~ 75 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH------PNIVRLIGVCTQKQPIYIVMELV 75 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEcCCCCeEEEEeec
Confidence 689999999999999999999999988653 2345667889898888754 58999999999999999999999
Q ss_pred cc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCCc
Q 001034 954 KA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHL 1032 (1182)
Q Consensus 954 ~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ 1032 (1182)
.+ +|.+++.... ..+++..++.++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++.......
T Consensus 76 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~~~~~~~~~ 148 (252)
T cd05084 76 QGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTE--KNVLKISDFGMSREEEDGV 148 (252)
T ss_pred cCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcC--CCcEEECccccCccccccc
Confidence 85 6666665322 12788899999999999999999999999999999999984 6779999999987543221
Q ss_pred cc-----ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1033 CS-----YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1033 ss-----~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
.. ...+..|+|||.+.+..++.++|||||||++|+|++ |.+||...........+.... +
T Consensus 149 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-~------------- 214 (252)
T cd05084 149 YASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-R------------- 214 (252)
T ss_pred ccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-C-------------
Confidence 11 122456999999999899999999999999999998 899997665544333331000 0
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||+.+|.+|||+.+|++
T Consensus 215 --------------------~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 215 --------------------L---------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred --------------------C---------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 001133678999999999999999999999985
No 264
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.9e-34 Score=300.01 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=199.2
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHT-----GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~T-----Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
..++|++.+.||.|+||.||++..+.. +..||+|.+.... .....+.+|+.+++.+.|+ ||++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~------~i~~~~~~ 77 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCH------HVVRLLGV 77 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCC------ceeEEEEE
Confidence 356899999999999999999987644 4889999987543 2234566788888777544 89999999
Q ss_pred EEecCeEEEEEEecc-cChHHHHhhhcccC----CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC
Q 001034 940 FYYREHLLIVCELLK-ANLYEFHKFNRESG----GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR 1014 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~-GsLld~Lk~~~~sg----gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d 1014 (1182)
+.....+|+||||+. ++|..++....... ....+++..+..++.||+.||.|||+.+|+||||||+|||++. +
T Consensus 78 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~--~ 155 (277)
T cd05032 78 VSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE--D 155 (277)
T ss_pred EcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC--C
Confidence 999999999999997 57777775432211 1123678889999999999999999999999999999999995 6
Q ss_pred ceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 001034 1015 CEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1015 G~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv 1088 (1182)
+.+||+|||+++..... .....++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+....+..+.
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 235 (277)
T cd05032 156 LTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235 (277)
T ss_pred CCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence 78999999998653322 223345778999999998889999999999999999998 999998877666554442
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
. +.. .......+..+.+||.+||+.+|.+|||+.+|+
T Consensus 236 ~--~~~-----------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 272 (277)
T cd05032 236 D--GGH-----------------------------------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIV 272 (277)
T ss_pred c--CCC-----------------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 0 000 000112367899999999999999999999998
Q ss_pred c
Q 001034 1169 K 1169 (1182)
Q Consensus 1169 q 1169 (1182)
+
T Consensus 273 ~ 273 (277)
T cd05032 273 S 273 (277)
T ss_pred H
Confidence 7
No 265
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.7e-34 Score=324.24 Aligned_cols=254 Identities=19% Similarity=0.278 Sum_probs=196.1
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHT-----GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~T-----Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
..++|++.+.||+|+||.||+|++... +..||||+++... .....+..|+.+++.+. .|+||++++++
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-----~h~nIv~~~~~ 110 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-----QHKNIVNLLGA 110 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-----cCCceeeEeeE
Confidence 356799999999999999999986543 4579999997542 33456778999998873 24599999999
Q ss_pred EEecCeEEEEEEecc-cChHHHHhhhccc---------------------------------------------------
Q 001034 940 FYYREHLLIVCELLK-ANLYEFHKFNRES--------------------------------------------------- 967 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~-GsLld~Lk~~~~s--------------------------------------------------- 967 (1182)
|.....+|+||||+. |+|.+++......
T Consensus 111 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 111 CTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred ecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 999999999999998 4677776543210
Q ss_pred -------------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCCc--
Q 001034 968 -------------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHL-- 1032 (1182)
Q Consensus 968 -------------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~-- 1032 (1182)
.....+++..++.|+.||+.||.|||++||+||||||+|||++. .+.+||+|||+++......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~--~~~~kL~DfGla~~~~~~~~~ 268 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTD--GRVAKICDFGLARDIMNDSNY 268 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeC--CCeEEEeeceeeeeccCCcce
Confidence 00123778889999999999999999999999999999999984 6789999999987543221
Q ss_pred ---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchh
Q 001034 1033 ---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKY 1108 (1182)
Q Consensus 1033 ---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~ 1108 (1182)
....+++.|+|||++....++.++|||||||++|+|++ |+.||........+..++....
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~---------------- 332 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGY---------------- 332 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHccc----------------
Confidence 12234567999999999999999999999999999997 9999976544333323221000
Q ss_pred hcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1109 FTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1109 F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.... ....+.++.+||.+||+.||.+|||+.+|++
T Consensus 333 -----------------~~~~---------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 333 -----------------QMSR---------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred -----------------CccC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0000 1123678999999999999999999999986
No 266
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-35 Score=338.13 Aligned_cols=258 Identities=28% Similarity=0.417 Sum_probs=202.2
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEec---cchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk---~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
...|+++++||+||-++||+|..-.. +.||+|.+.. +.....-+..|+..|..|.... +||+||+|-....
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~-----~IIqL~DYEv~d~ 433 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHD-----KIIQLYDYEVTDG 433 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCc-----eEEEEeeeeccCc
Confidence 35699999999999999999986444 4555554432 3456778899999999998765 8999999999999
Q ss_pred eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 945 HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 945 ~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
.+|||||+-..+|...+...... .+..-+++|.+|++.|+.++|..||||.||||.|+|+- .|.+||||||+
T Consensus 434 ~lYmvmE~Gd~DL~kiL~k~~~~-----~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV---kG~LKLIDFGI 505 (677)
T KOG0596|consen 434 YLYMVMECGDIDLNKILKKKKSI-----DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV---KGRLKLIDFGI 505 (677)
T ss_pred eEEEEeecccccHHHHHHhccCC-----CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE---eeeEEeeeech
Confidence 99999999999998888755422 34347899999999999999999999999999999998 68999999999
Q ss_pred ccccCCCc-----ccccCCCcccchhhhcCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 001034 1025 SCFETDHL-----CSYVQSRSYRAPEVILGL-----------SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1025 A~~~~~~~-----ss~vGTp~YmAPEVLlg~-----------~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv 1088 (1182)
|....... .+.+||+.|||||.+... +.+.++||||||||||+|+.|++||.... ..++++.
T Consensus 506 A~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~ 583 (677)
T KOG0596|consen 506 ANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLH 583 (677)
T ss_pred hcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHH
Confidence 97655443 357999999999999633 26689999999999999999999996432 2233332
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
.+..|- . .+ ..|.. + ...+++++++.||.+||.+|||..+||
T Consensus 584 aI~~P~-~---------------------------~I--efp~~-------~-~~~~li~~mK~CL~rdPkkR~si~eLL 625 (677)
T KOG0596|consen 584 AITDPN-H---------------------------EI--EFPDI-------P-ENDELIDVMKCCLARDPKKRWSIPELL 625 (677)
T ss_pred hhcCCC-c---------------------------cc--cccCC-------C-CchHHHHHHHHHHhcCcccCCCcHHHh
Confidence 221110 0 00 01110 0 023499999999999999999999999
Q ss_pred cCCCCCCCCCC
Q 001034 1169 KHPWLSHPYEP 1179 (1182)
Q Consensus 1169 qHPWFk~~~eP 1179 (1182)
+|||++-...|
T Consensus 626 qhpFl~~~~i~ 636 (677)
T KOG0596|consen 626 QHPFLQIQPIP 636 (677)
T ss_pred cCccccccccc
Confidence 99999876555
No 267
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.7e-34 Score=301.45 Aligned_cols=250 Identities=25% Similarity=0.418 Sum_probs=198.1
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+|.+.+.||.|+||.||++.+..++..+++|+++... ........|+.+++.++ ||||+++++++...
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 74 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD------HPAIVKFHASFLER 74 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC------CCcHHHHHHHHhcC
Confidence 6899999999999999999998888888888876421 22234556777777765 45899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
...|+||||+.+ +|..++....... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++. +.++|+||
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~---~~~~l~d~ 149 (260)
T cd08222 75 DAFCIITEYCEGRDLDCKLEELKHTG--KTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN---NLLKIGDF 149 (260)
T ss_pred CceEEEEEeCCCCCHHHHHHHHhhcc--cccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec---CCEeeccc
Confidence 999999999986 5555554322221 23889999999999999999999999999999999999973 45999999
Q ss_pred CCccccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1023 GSSCFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1023 GLA~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
|++...... .....+++.|+|||.+.+..++.++|+||||+++|+|++|..||...........+.. ++.+
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---- 223 (260)
T cd08222 150 GVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--GPTP---- 223 (260)
T ss_pred CceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CCCC----
Confidence 998654322 2245678899999999888899999999999999999999999977665444443321 0000
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.....++..+.+||.+||..+|.+||++.++++||||
T Consensus 224 -------------------------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 224 -------------------------------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred -------------------------------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0112346789999999999999999999999999997
No 268
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=5.2e-34 Score=298.40 Aligned_cols=247 Identities=23% Similarity=0.342 Sum_probs=199.0
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+..++|+++++||.|+||.||+|.. .+++.||+|.+.........+..|+.+++.+.|+ ||+++++++. ...
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~------~i~~~~~~~~-~~~ 74 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP------RLVRLYAVVT-QEP 74 (260)
T ss_pred cchHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc------CeeeEEEEEc-cCC
Confidence 3457899999999999999999985 4678899999987665566788899999888654 8999999874 567
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+|+||||+. ++|.+++..... ..++...+..++.||+.||.|||+.|++||||||+||+++. ++.++|+|||+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l~dfg~ 148 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE--TLCCKIADFGL 148 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC--CCCEEEccCcc
Confidence 899999997 467777654321 23788899999999999999999999999999999999995 67799999999
Q ss_pred ccccCCC----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1025 SCFETDH----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1025 A~~~~~~----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
+...... .....++..|+|||++.+..++.++|||||||++|+|++ |++||.+.+..+.+..+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~------- 221 (260)
T cd05067 149 ARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR------- 221 (260)
T ss_pred eeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC-------
Confidence 8754421 112345678999999999899999999999999999999 9999987776555544421000
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+ .....+..+.+||.+||..+|.+|||+.+++.
T Consensus 222 -----------------------------~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 222 -----------------------------MP-------RPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred -----------------------------CC-------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00 01123578999999999999999999999986
No 269
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.7e-34 Score=299.40 Aligned_cols=248 Identities=20% Similarity=0.275 Sum_probs=192.9
Q ss_pred EEEEEeccCCceEEEEEEECCCCc--EEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---
Q 001034 872 HVTEYLGSAAFSKAIQAHDLHTGM--DVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--- 943 (1182)
Q Consensus 872 eIlk~LGkGaFGeVyLAkDk~TGr--~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--- 943 (1182)
.+.+.||+|+||.||+|+...++. .+|+|.++.. ......+..|+.+++.++|+ ||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~~~~~~ 75 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHP------NVMRLIGVCLQTVES 75 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCC------CcceEEEEEccCCcc
Confidence 467889999999999999877775 5899998754 33345677788888887654 899999876432
Q ss_pred ---CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 944 ---EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 944 ---e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
...++||||+. |+|..++...........+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~kl 153 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNE--NMNVCV 153 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcC--CCCEEE
Confidence 35789999998 567776654432222234888999999999999999999999999999999999984 678999
Q ss_pred ecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1020 IDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1020 iDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp 1093 (1182)
+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+.........+... .
T Consensus 154 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~--~ 231 (272)
T cd05075 154 ADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQG--N 231 (272)
T ss_pred CCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC--C
Confidence 9999987643321 12345678999999999999999999999999999999 89999876665544443200 0
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. ....+..+..+.+||.+||+.||.+|||+.+|+++
T Consensus 232 ------------------------------~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 232 ------------------------------R-----------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred ------------------------------C-----------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 0 00112346789999999999999999999999874
No 270
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.2e-34 Score=298.02 Aligned_cols=246 Identities=24% Similarity=0.336 Sum_probs=200.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.++|++.+.||.|+||.||+|.+. .++.||+|.++........+.+|+.+++.++|+ ||+++++++.....+|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHP------KLIQLYAVCTLEEPIY 77 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCC------CccceeEEEecCCCee
Confidence 467999999999999999999864 457899999987655556778899999988654 8999999999999999
Q ss_pred EEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.||+||||||+|||++. ++.++|+|||++.
T Consensus 78 lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~l~dfg~~~ 151 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE--NNICKVADFGLAR 151 (261)
T ss_pred eeeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC--CCCEEECCcceEE
Confidence 9999995 67888876543 123788999999999999999999999999999999999995 6779999999987
Q ss_pred ccCCCcc-c---ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETDHLC-S---YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~~~s-s---~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
....... . ...+..|+|||++.+..++.++|+|||||++|+|++ |+.||.+......+..+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--------- 222 (261)
T cd05068 152 VIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR--------- 222 (261)
T ss_pred EccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------
Confidence 6543211 1 122357999999999999999999999999999999 9999988777666555421100
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+ .....+..+.+||.+||+.+|.+||++.+|++
T Consensus 223 ---------------------------~~-------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 223 ---------------------------MP-------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ---------------------------CC-------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 00 01234578999999999999999999999975
No 271
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.4e-34 Score=300.38 Aligned_cols=245 Identities=24% Similarity=0.337 Sum_probs=196.6
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.++|++.+.||.|+||.||+|.+..+ ..||+|+++........+..|+.+++.+.| +||+++++.+. ....|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRH------EKLVQLYAVVS-EEPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCC------CCcceEEEEEC-CCCcE
Confidence 46799999999999999999988665 459999998755445567889999988765 48999998874 46689
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+.+++||||||+|||++. ++.++|+|||.+.
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~--~~~~~L~dfg~~~ 150 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE--NLVCKVADFGLAR 150 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC--CCcEEeccCCcee
Confidence 99999985 77777764321 13788899999999999999999999999999999999984 6789999999987
Q ss_pred ccCCCcc----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETDHLC----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~~~s----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
....... ...++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+......+..+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~--------- 221 (262)
T cd05071 151 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--------- 221 (262)
T ss_pred eccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC---------
Confidence 5433221 2345677999999999999999999999999999999 8999988776655554421000
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||+.+|.+||++.++++
T Consensus 222 ---------------------------~-------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 222 ---------------------------M-------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred ---------------------------C-------CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 0 001234678999999999999999999999886
No 272
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-35 Score=344.39 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=210.7
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+...|++...||.|+|+.|..+.+..+++.+++|++.+.. ....+|+.++.... .|+||+++.+.+.+..+.
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~-----~h~niv~~~~v~~~~~~~ 391 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVR-----DHPNIVKSHDVYEDGKEI 391 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhc-----CCCcceeecceecCCcee
Confidence 5678999999999999999999999999999999998763 34456777766665 356999999999999999
Q ss_pred EEEEEecccChH-HHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKANLY-EFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~GsLl-d~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+|||++.|..+ +-+...+. +. ..+..|+++|+.|+.|||++|+|||||||+|||++ ...++|+|+|||.+
T Consensus 392 ~~v~e~l~g~ell~ri~~~~~------~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~-~~~g~lrltyFG~a 463 (612)
T KOG0603|consen 392 YLVMELLDGGELLRRIRSKPE------FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD-GSAGHLRLTYFGFW 463 (612)
T ss_pred eeeehhccccHHHHHHHhcch------hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec-CCCCcEEEEEechh
Confidence 999999998644 33333221 33 67788999999999999999999999999999995 35788999999999
Q ss_pred cccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhcCCcchhhhhcccc
Q 001034 1026 CFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPA-TLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1026 ~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~-elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
+.......+.+-|..|.|||++....|+.+|||||||++||+||+|+.||.+.... +++.+| +.++.
T Consensus 464 ~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~-------- 531 (612)
T KOG0603|consen 464 SELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKF-------- 531 (612)
T ss_pred hhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCcc--------
Confidence 88776666678889999999999999999999999999999999999999876555 333333 11110
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC-CCCCCCC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL-SHPYEPI 1180 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF-k~~~eP~ 1180 (1182)
...+|..+++||++||++||.+||++.+++.|||| +++..|.
T Consensus 532 ----------------------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~~t~p~ 574 (612)
T KOG0603|consen 532 ----------------------------------SECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSHPTFPP 574 (612)
T ss_pred ----------------------------------ccccCHHHHHHHHHhccCChhhCcChhhhccCcchhcCCCCCc
Confidence 03468999999999999999999999999999999 7777665
No 273
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.4e-34 Score=322.80 Aligned_cols=254 Identities=23% Similarity=0.356 Sum_probs=196.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHD-----LHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkD-----k~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++.+.||+|+||.||+|.. ..++..||||+++... .....+.+|+.+++.+. .||||++++++|
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-----~HpnIv~l~~~~ 108 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHINIVNLLGAC 108 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-----CCcceeeeeeee
Confidence 45899999999999999999964 3567789999997542 23456778999999883 255999999999
Q ss_pred EecCeEEEEEEeccc-ChHHHHhhhccc----------------------------------------------------
Q 001034 941 YYREHLLIVCELLKA-NLYEFHKFNRES---------------------------------------------------- 967 (1182)
Q Consensus 941 qd~e~LyLVmEyL~G-sLld~Lk~~~~s---------------------------------------------------- 967 (1182)
......|+||||+.+ +|.+++......
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 999999999999984 677777543210
Q ss_pred -----------------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 968 -----------------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 968 -----------------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
.....+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++.....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIRN 266 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEEC--CCcEEEecCccceeccC
Confidence 01124778889999999999999999999999999999999984 66799999999875433
Q ss_pred Cc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1031 HL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1031 ~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
.. ....++..|+|||++.+..++.++|||||||++|+|++ |..||........+.+++. ..
T Consensus 267 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~-----------~~-- 333 (375)
T cd05104 267 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK-----------EG-- 333 (375)
T ss_pred cccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH-----------hC--
Confidence 21 12334567999999999999999999999999999998 8999976544332222210 00
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.... .....+.++.+||.+||+.||.+|||+.+|++.
T Consensus 334 --------------------~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 334 --------------------YRML---------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred --------------------ccCC---------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 0000 011235789999999999999999999999874
No 274
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.8e-34 Score=307.96 Aligned_cols=250 Identities=24% Similarity=0.407 Sum_probs=202.0
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
...||.|+||.||++....+++.||||.+.... .....+..|+.+++.+.| +||+++++.|....+.|+||||
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH------ENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC------cchhheeeEEEeCCEEEEEEec
Confidence 357899999999999999999999999986433 234456778888888765 4899999999999999999999
Q ss_pred cccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC
Q 001034 953 LKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 953 L~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~ 1031 (1182)
+.++ |.+++. .. .+++..++.++.||+.||.|||+.|++|+||+|.||+++. ++.++|+|||++......
T Consensus 99 ~~~~~L~~~~~-~~------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~--~~~~~l~dfg~~~~~~~~ 169 (292)
T cd06657 99 LEGGALTDIVT-HT------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKE 169 (292)
T ss_pred CCCCcHHHHHh-cC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC--CCCEEEcccccceecccc
Confidence 9875 544432 21 2788899999999999999999999999999999999984 677999999987644322
Q ss_pred ---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchh
Q 001034 1032 ---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKY 1108 (1182)
Q Consensus 1032 ---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~ 1108 (1182)
.....+++.|+|||.+.+..++.++|+|||||++|+|++|..||.+......+..+...+.
T Consensus 170 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~---------------- 233 (292)
T cd06657 170 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------- 233 (292)
T ss_pred cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC----------------
Confidence 2335678899999999888899999999999999999999999988766555443321100
Q ss_pred hcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCC
Q 001034 1109 FTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEP 1179 (1182)
Q Consensus 1109 F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP 1179 (1182)
. ........+..+.+||.+||+.+|.+||++.++|+||||.....|
T Consensus 234 ----------------------~---~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 234 ----------------------P---KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred ----------------------c---ccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 0 000112346789999999999999999999999999999998855
No 275
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.4e-33 Score=296.51 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=198.8
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc------chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN------KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~------k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
.+|++.+.||+|+||.||++.+..+++.||+|++... ......+.+|+.+++.+.|+ ||+++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~------~i~~~~~~~~~ 75 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHD------RIVQYYGCLRD 75 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCC------CcceEEEEEEc
Confidence 3699999999999999999999999999999998542 22345667788888888654 89999999876
Q ss_pred c--CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 943 R--EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 943 ~--e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
. ..+++||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.|++|+||||+||+++. ++.++|
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~--~~~~~l 147 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDS--AGNVKL 147 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC--CCCEEE
Confidence 4 468999999985 6766665332 2778889999999999999999999999999999999984 677999
Q ss_pred ecCCCccccCCC------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1020 IDLGSSCFETDH------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1020 iDFGLA~~~~~~------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
+|||++...... .....++..|+|||++.+..++.++|+|||||++|+|++|+.||........+.++. ..
T Consensus 148 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~ 224 (264)
T cd06653 148 GDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQ 224 (264)
T ss_pred CccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cC
Confidence 999998754321 123467889999999999889999999999999999999999998765444333331 00
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
.. . ......++..+.+||.+||+ +|..||++.++|.|||.
T Consensus 225 ~~------------------------------------~---~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 225 PT------------------------------------K---PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CC------------------------------------C---CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 00 0 00122356889999999999 57999999999999984
No 276
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.7e-34 Score=301.71 Aligned_cols=251 Identities=21% Similarity=0.257 Sum_probs=198.2
Q ss_pred CCEEEEEEeccCCceEEEEEEEC----CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL----HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk----~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..|++.+.||+|+||.||+|... ..+..+|+|.+.... .....+.+|+.+++.+.| +||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~~~~~~~~ 78 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH------PNIVCLLGVVTQ 78 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC------CCeeeEEEEEec
Confidence 56899999999999999999853 456789999997532 233566778888888754 489999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhccc-----------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEc
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRES-----------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVK 1010 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~s-----------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILID 1010 (1182)
....|+||||+.+ +|.+++...... .....+++..+..++.||+.||.|||+++|+||||||+|||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 9999999999985 777776533210 0012377888999999999999999999999999999999999
Q ss_pred cCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 001034 1011 SYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLL 1084 (1182)
Q Consensus 1011 s~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elL 1084 (1182)
. .+.+||+|||+++..... .....++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.....+.
T Consensus 159 ~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05090 159 E--QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVI 236 (283)
T ss_pred C--CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 5 667999999998754221 223345677999999998899999999999999999998 99999887765555
Q ss_pred HHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 001034 1085 ARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA 1164 (1182)
Q Consensus 1085 akIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA 1164 (1182)
..+.... .......++..+.+||.+||+.||.+||++
T Consensus 237 ~~~~~~~-------------------------------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~ 273 (283)
T cd05090 237 EMVRKRQ-------------------------------------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRF 273 (283)
T ss_pred HHHHcCC-------------------------------------------cCCCCCCCCHHHHHHHHHHcccCcccCcCH
Confidence 4442100 000112346789999999999999999999
Q ss_pred HHHHcC
Q 001034 1165 SDALKH 1170 (1182)
Q Consensus 1165 eELLqH 1170 (1182)
.+|+++
T Consensus 274 ~~i~~~ 279 (283)
T cd05090 274 KDIHTR 279 (283)
T ss_pred HHHHHH
Confidence 999875
No 277
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.8e-34 Score=295.43 Aligned_cols=245 Identities=20% Similarity=0.300 Sum_probs=201.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.+.|++.+.||.|+||.||+|.. .++.||+|.+.........+.+|+.+++.+.|+ ||+++++++......|
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP------NLVQLLGVVLQGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc------ceeeeEEEEcCCCCeE
Confidence 35789999999999999999985 488999999987765567788899999988654 8999999999999999
Q ss_pred EEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+. ++|.+++..... ..+++..+..++.|++.||.|||+.+++|+||||+|||++. ++.++|+|||.+.
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~--~~~~~l~d~g~~~ 150 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSE--DLVAKVSDFGLAK 150 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeC--CCCEEEccccccc
Confidence 9999998 578887764431 13889999999999999999999999999999999999984 6789999999988
Q ss_pred ccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1027 FETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1027 ~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
...........+..|+|||.+....++.++|+|||||++|+|++ |+.||...+.......+....
T Consensus 151 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-------------- 216 (256)
T cd05039 151 EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-------------- 216 (256)
T ss_pred ccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC--------------
Confidence 66444334445667999999998889999999999999999997 999998776655443331000
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+ ......+..+.+||.+||..+|.+|||+.+|++
T Consensus 217 -----------------------~~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 217 -----------------------RM------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred -----------------------CC------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 00 001234688999999999999999999999986
No 278
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7e-34 Score=298.58 Aligned_cols=245 Identities=21% Similarity=0.310 Sum_probs=197.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
.+|++++.||+|+||.||++... .+..+|+|.+.........+.+|+.+++.+.| |||+++++++.....+|+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH------EKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCC------CCeeeEEEEEccCCCcEE
Confidence 46999999999999999999864 34569999988655445667888888888754 599999999999999999
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+.+ +|.+++..... .+++..+..++.||+.||.|||+.|++|+||||.|||++. ++.+||+|||.+..
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~--~~~~kl~d~g~~~~ 149 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD--QGCVKVSDFGLSRY 149 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCCEEECCCcccee
Confidence 9999985 67777654321 3889999999999999999999999999999999999984 67899999999865
Q ss_pred cCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1028 ETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1028 ~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
..... ....++..|+|||++.+..++.++|+|||||++|+|++ |+.||...+.......+.....+
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------- 220 (256)
T cd05113 150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------- 220 (256)
T ss_pred cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC---------
Confidence 43221 12234567999999998889999999999999999998 99999877665555544311100
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
......+..+++||.+||+.+|.+|||+.+|+.+
T Consensus 221 ----------------------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 221 ----------------------------------YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ----------------------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0011236789999999999999999999999975
No 279
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.5e-34 Score=299.72 Aligned_cols=245 Identities=22% Similarity=0.321 Sum_probs=201.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch-hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD-FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~-~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.+|++.+.||.|+||.||+|.+.. +..+|+|++..... ....+..|+.+++.++| +||+++++++......|
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRH------KHLISLFAVCSVGEPVY 78 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCC------cchhheeeeEecCCCeE
Confidence 468899999999999999999877 89999999986653 45567788888887754 48999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+.||+|+||+|+|||++. ++.+||+|||++.
T Consensus 79 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~--~~~~kl~d~g~~~ 152 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGE--DLVCKVADFGLAR 152 (261)
T ss_pred EEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcC--CceEEEccccchh
Confidence 99999985 78887764321 23788899999999999999999999999999999999984 6789999999987
Q ss_pred ccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1027 FETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1027 ~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... ....++..|+|||++....++.++|||||||++|+|++ |+.||...+..+.+..+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------- 222 (261)
T cd05148 153 LIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR---------- 222 (261)
T ss_pred hcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc----------
Confidence 644322 12344678999999998899999999999999999998 8999988776666655531100
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.++|.+||+.||.+|||+.+|++
T Consensus 223 --------------------------~-------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 --------------------------M-------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred --------------------------C-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 011234678999999999999999999999986
No 280
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.9e-34 Score=309.86 Aligned_cols=252 Identities=23% Similarity=0.350 Sum_probs=203.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
..|.+.+.||.|+||.||+++++.++..+|+|.+... ......+..|+.+++.+.|+ |++++++++....
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~ 88 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP------NTIQYRGCYLREH 88 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC------CcccEEEEEEcCC
Confidence 4577788999999999999999999999999998642 22344567788888887654 8999999999999
Q ss_pred eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 945 HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 945 ~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
..++||||+.+++..++..... .+++..+..++.||+.||.|||+.+++||||+|+|||++. .+.++|+|||+
T Consensus 89 ~~~lv~e~~~~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~--~~~~kl~dfg~ 161 (308)
T cd06634 89 TAWLVMEYCLGSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSE--PGLVKLGDFGS 161 (308)
T ss_pred eeEEEEEccCCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECC--CCcEEECCccc
Confidence 9999999999988877654332 2788899999999999999999999999999999999984 67899999999
Q ss_pred ccccCCCcccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1025 SCFETDHLCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1025 A~~~~~~~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+..... .....+++.|+|||++. ...++.++|||||||++|+|++|..||...+....+..+....
T Consensus 162 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---------- 230 (308)
T cd06634 162 ASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE---------- 230 (308)
T ss_pred ceeecC-cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC----------
Confidence 876443 23456888999999985 3457889999999999999999999997765444333321000
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+. ......+..+.+||.+||..+|.+||++.++++||||...
T Consensus 231 ---------------------------~~~-----~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 231 ---------------------------SPA-----LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred ---------------------------CCC-----cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 000 0112346789999999999999999999999999999775
No 281
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.2e-33 Score=294.58 Aligned_cols=247 Identities=23% Similarity=0.315 Sum_probs=201.8
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..++|++.+.||.|+||.||+|.+. .++.+|||.+.........+.+|+.+++.+.| +||+++++++.....+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH------DKLVQLYAVCSEEEPI 76 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCC------CCEeeeeeeeecCCce
Confidence 4578999999999999999999975 55789999998766556778889999988865 4899999999988999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+++++|+||||+||+++. ++.++|+|||++
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~--~~~~~l~d~g~~ 150 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGE--NLVCKIADFGLA 150 (261)
T ss_pred EEEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcC--CCCEEECccccc
Confidence 999999985 67777754321 13788999999999999999999999999999999999985 678999999998
Q ss_pred cccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
....... .....+..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.+....+..+...+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~------- 223 (261)
T cd05034 151 RLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM------- 223 (261)
T ss_pred eeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-------
Confidence 7654321 12234567999999999899999999999999999999 99999887776666655311100
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
......+..+.++|.+||+.+|.+||++.++++
T Consensus 224 ------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 224 ------------------------------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ------------------------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 001123578999999999999999999999985
No 282
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.6e-34 Score=308.08 Aligned_cols=278 Identities=22% Similarity=0.255 Sum_probs=195.5
Q ss_pred CceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc-C
Q 001034 881 AFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA-N 956 (1182)
Q Consensus 881 aFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G-s 956 (1182)
+++.||+++...+++.||||++... ......+..|+.+++.++| +||++++++|.....+|++|||+.+ +
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h------~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQH------PNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCC------cchhhhhheeecCCeEEEEEeccCCCC
Confidence 5566777777789999999999754 3445677888999888865 4899999999999999999999995 5
Q ss_pred hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC-----
Q 001034 957 LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH----- 1031 (1182)
Q Consensus 957 Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~----- 1031 (1182)
+.+++...... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||.+......
T Consensus 86 l~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~--~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG--DGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec--CCceEEecCccceeecccccccc
Confidence 66666543221 2788899999999999999999999999999999999984 678999999987543211
Q ss_pred -----cccccCCCcccchhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1032 -----LCSYVQSRSYRAPEVILG--LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1032 -----~ss~vGTp~YmAPEVLlg--~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
.....++..|+|||++.. ..++.++|+|||||++|+|++|..||........+... ..+..+..+... ..
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~-~~ 236 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK--VRGTVPCLLDKS-TY 236 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhccCccccccC-ch
Confidence 123456778999999976 45889999999999999999999999876544333221 122111111000 00
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCCCC
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYEPI 1180 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~eP~ 1180 (1182)
.... ...... .....................+..+.+||++||++||.+|||+.+||+||||+...++.
T Consensus 237 --~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~~ 305 (314)
T cd08216 237 --PLYE--DSMSQS---RSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRRN 305 (314)
T ss_pred --hhhc--CCcCcc---cccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhcccc
Confidence 0000 000000 00000000000000111223467899999999999999999999999999999877654
No 283
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.8e-34 Score=297.57 Aligned_cols=246 Identities=22% Similarity=0.317 Sum_probs=197.6
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..++|++.+.||+|+||.||+|.+. .+..+|+|.+.........+.+|+.+++.++|+ +|+++++++. ....
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~~~~~~~-~~~~ 75 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHD------KLVQLYAVVS-EEPI 75 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCC------ceEEEEeEEC-CCCc
Confidence 4568999999999999999999865 566799999987655556788899999988655 8999999875 4678
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++..... ..+++..++.++.||+.||.|||+.+|+||||||+|||++. ++.++|+|||++
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~--~~~~~l~dfg~~ 149 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD--GLVCKIADFGLA 149 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC--CceEEeCCceee
Confidence 999999985 67777654321 13788999999999999999999999999999999999984 678999999998
Q ss_pred cccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
....... ....++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+.+..+.+..+.... +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~------- 221 (260)
T cd05070 150 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-R------- 221 (260)
T ss_pred eeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-C-------
Confidence 7543322 12234567999999998899999999999999999999 999998877666555542100 0
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||..+|.+|||+.++++
T Consensus 222 ----------------------------~-------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 222 ----------------------------M-------PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred ----------------------------C-------CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 0 011234678999999999999999999999875
No 284
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=6.2e-34 Score=303.01 Aligned_cols=254 Identities=26% Similarity=0.365 Sum_probs=199.3
Q ss_pred CEEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEeccc-----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDL---HTGMDVCVKIIKNNK-----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk---~TGr~VAVKIIkk~k-----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.|++.+.||.|+||.||+|.+. .+|+.||+|+++... .....+..|+.+++.+.+ |++|+++++.|.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-----~~~i~~~~~~~~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ-----SPFLVTLHYAFQ 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhccc-----CCChhceeeEee
Confidence 4889999999999999999875 488999999997532 223556778888888853 359999999999
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
....+|+||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.|++||||+|+|||++. ++.+||+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~--~~~~kl~ 147 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS--NGHVVLT 147 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECC--CCCEEEe
Confidence 99999999999995 6777765432 2788899999999999999999999999999999999984 6789999
Q ss_pred cCCCccccCCC----cccccCCCcccchhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDH----LCSYVQSRSYRAPEVILGL--SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~----~ss~vGTp~YmAPEVLlg~--~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||++...... .....++..|+|||.+... .++.++|||||||++|+|++|..||...........+...+..
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~- 226 (290)
T cd05613 148 DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK- 226 (290)
T ss_pred eCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc-
Confidence 99998654321 2245688999999998753 4778999999999999999999999643322111111100000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC-----CHHHHHc
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP-----SASDALK 1169 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP-----TAeELLq 1169 (1182)
..+ .....++..+.+||++||+.||.+|| ++.+++.
T Consensus 227 ---------------------------------~~~------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 227 ---------------------------------SEP------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------------------------------cCC------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 000 01123467899999999999999997 8999999
Q ss_pred CCCCCCC
Q 001034 1170 HPWLSHP 1176 (1182)
Q Consensus 1170 HPWFk~~ 1176 (1182)
||||+..
T Consensus 268 ~~~~~~~ 274 (290)
T cd05613 268 HPFFQKI 274 (290)
T ss_pred CcccccC
Confidence 9999865
No 285
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.2e-34 Score=302.93 Aligned_cols=250 Identities=21% Similarity=0.270 Sum_probs=199.0
Q ss_pred CCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..|.+.+.||.|+||.||++.+. .++..+|+|.+.... .....+..|+.+++.+.|+ +|+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~ 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE------HIVKFYGVCVE 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCC------CcceEEEEEec
Confidence 46899999999999999999853 355679999987543 3345678899999888654 89999999999
Q ss_pred cCeEEEEEEecc-cChHHHHhhhccc-------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC
Q 001034 943 REHLLIVCELLK-ANLYEFHKFNRES-------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR 1014 (1182)
Q Consensus 943 ~e~LyLVmEyL~-GsLld~Lk~~~~s-------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d 1014 (1182)
...+++||||+. ++|.+++...... .....+++..+..++.||+.||.|||++|++||||||+|||++. +
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~--~ 156 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE--N 156 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc--C
Confidence 999999999998 4677776543210 11123889999999999999999999999999999999999984 7
Q ss_pred ceEEEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 001034 1015 CEVKVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1015 G~IKLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv 1088 (1182)
+.+||+|||++....... ....+++.|+|||++.+..++.++|+|||||++|+|++ |.+||........+..+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~ 236 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT 236 (288)
T ss_pred CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 789999999987543221 22334678999999999999999999999999999998 999998877766655553
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
.... .......+..+.+||.+||+.||.+|||+.+++
T Consensus 237 ~~~~-------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~ 273 (288)
T cd05093 237 QGRV-------------------------------------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIH 273 (288)
T ss_pred cCCc-------------------------------------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 1100 000113467899999999999999999999986
Q ss_pred c
Q 001034 1169 K 1169 (1182)
Q Consensus 1169 q 1169 (1182)
.
T Consensus 274 ~ 274 (288)
T cd05093 274 S 274 (288)
T ss_pred H
Confidence 5
No 286
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.1e-33 Score=296.53 Aligned_cols=246 Identities=23% Similarity=0.333 Sum_probs=197.4
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
..++|++.+.||.|+||.||+|.+..+ ..+|+|++.........+.+|+.+++.+.|+ +++++++++. ....
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~------~i~~~~~~~~-~~~~ 75 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTMMPEAFLQEAQIMKKLRHD------KLVPLYAVVS-EEPI 75 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCccHHHHHHHHHHHHhCCCC------CeeeEEEEEc-CCCc
Confidence 346799999999999999999987655 4699999876655556778899999988654 8999998875 4678
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+.|++|+||||+|||++. ++.++|+|||++
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~--~~~~~l~dfg~~ 149 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGD--NLVCKIADFGLA 149 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcC--CCeEEECCCccc
Confidence 999999985 78887764321 23788889999999999999999999999999999999984 678999999998
Q ss_pred cccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1026 CFETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1026 ~~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
....... ....++..|+|||.+.+..++.++|+|||||++|+|++ |++||.+....+.+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-------- 221 (260)
T cd05069 150 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR-------- 221 (260)
T ss_pred eEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--------
Confidence 7543322 12345677999999998899999999999999999999 9999988776665554421100
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||++||..||.+||++.++++
T Consensus 222 ----------------------------~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 222 ----------------------------M-------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred ----------------------------C-------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0 001123578999999999999999999999986
No 287
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.8e-34 Score=299.32 Aligned_cols=249 Identities=26% Similarity=0.381 Sum_probs=198.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||.|+||.||++.++.+++.+|||.+... ......+.+|+.+++.+.| +||++++++|....
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~~~ 75 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH------PNVIKYYASFIEDN 75 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC------CchhhhhheeEeCC
Confidence 4688999999999999999999999999999988653 2234567788888888865 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
.+++||||+.+ +|..++...... ...+++..++.++.||+.||.|||++|++|+||||+||+++. ++.++|+|||
T Consensus 76 ~~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~--~~~~~l~dfg 151 (267)
T cd08229 76 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEEecCCCCHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC--CCCEEECcch
Confidence 99999999985 677766543221 224888999999999999999999999999999999999984 6789999999
Q ss_pred CccccCCCc---ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhcCCcchhh
Q 001034 1024 SSCFETDHL---CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPA--TLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1024 LA~~~~~~~---ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~--elLakIv~ilGp~Peem 1098 (1182)
++....... ....++..|+|||++.+..++.++|+||||+++|+|++|..||.+.... .....+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 224 (267)
T cd08229 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD------- 224 (267)
T ss_pred hhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC-------
Confidence 987544322 2456889999999999989999999999999999999999999754321 1111111000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+. ......+..+.+||.+||..||.+|||+.+|++
T Consensus 225 ------------------------------~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 225 ------------------------------YPP-----LPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ------------------------------CCC-----CCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 000 001234678999999999999999999998775
No 288
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=8.8e-34 Score=296.06 Aligned_cols=243 Identities=21% Similarity=0.290 Sum_probs=196.6
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE-ecCeEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY-YREHLL 947 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq-d~e~Ly 947 (1182)
.+|++.+.||+|+||.||++.. .+..+|+|.++.... ...+..|+.+++.+.|. +++++++++. ....+|
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~-~~~~~~e~~~l~~l~~~------~i~~~~~~~~~~~~~~~ 76 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT-AQAFLAEASVMTQLRHS------NLVQLLGVIVEEKGGLY 76 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch-HHHHHHHHHHHHhCCCC------CeeeEEEEEEcCCCceE
Confidence 4789999999999999999975 478899999876543 45677899998888654 8999998764 456799
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||+++ +|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||++.
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~ 150 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSE--DNVAKVSDFGLTK 150 (256)
T ss_pred EEEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcC--CCcEEecCCccce
Confidence 99999985 78877764332 23788899999999999999999999999999999999984 6789999999987
Q ss_pred ccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1027 FETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1027 ~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
...........+..|+|||++.+..++.++|||||||++|+|++ |++||...+.......+.....
T Consensus 151 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~------------- 217 (256)
T cd05082 151 EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK------------- 217 (256)
T ss_pred eccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-------------
Confidence 65544444455678999999999899999999999999999997 9999987666555444421000
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
+ ...+..+..+.+||.+||+.+|.+|||+.++++
T Consensus 218 ------------------------~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 218 ------------------------M------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ------------------------C------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 011234688999999999999999999999986
No 289
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=8.8e-34 Score=304.54 Aligned_cols=252 Identities=20% Similarity=0.260 Sum_probs=198.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCc--EEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGM--DVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr--~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||.|+||.||+|....++. .+++|.++.. ......+..|+.++.++.+ ||||+++++++....
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~-----hp~iv~~~~~~~~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGH-----HPNIINLLGACENRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcC-----CCchhheEEEEccCC
Confidence 579999999999999999999877765 4688888642 2334567788888888742 559999999999999
Q ss_pred eEEEEEEecc-cChHHHHhhhcccC----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESG----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS 1013 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sg----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~ 1013 (1182)
.+|+||||++ ++|.+++....... ....+++..++.++.||+.||.|||+.||+||||||+|||++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~-- 154 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGE-- 154 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECC--
Confidence 9999999998 57888876432111 1123788899999999999999999999999999999999984
Q ss_pred CceEEEecCCCccccCCCccc--ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhh
Q 001034 1014 RCEVKVIDLGSSCFETDHLCS--YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGI 1090 (1182)
Q Consensus 1014 dG~IKLiDFGLA~~~~~~~ss--~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~i 1090 (1182)
++.+||+|||++......... ...+..|+|||++.+..++.++|||||||++|+|++ |.+||........+.++...
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~ 234 (297)
T cd05089 155 NLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234 (297)
T ss_pred CCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC
Confidence 678999999998643322222 223457999999999999999999999999999997 99999887766655544210
Q ss_pred cCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1091 IGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1091 lGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.. . .....++..+.+||.+||+.+|.+|||+.++++.
T Consensus 235 ~~----------------------------------~---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 235 YR----------------------------------M---------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred CC----------------------------------C---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0 0012356889999999999999999999999764
No 290
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.2e-34 Score=301.70 Aligned_cols=258 Identities=17% Similarity=0.242 Sum_probs=200.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCC----------------cEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCC
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTG----------------MDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGD 929 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TG----------------r~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~ 929 (1182)
..+|++++.||+|+||.||+|.+...+ ..||+|++.... .....+.+|+.+++.+.|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~---- 79 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDP---- 79 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCC----
Confidence 367999999999999999999876544 568999987653 3455677899999988654
Q ss_pred CcceEEEEEEEEecCeEEEEEEeccc-ChHHHHhhhccc-----CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccC
Q 001034 930 KYHLLRLYDYFYYREHLLIVCELLKA-NLYEFHKFNRES-----GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLK 1003 (1182)
Q Consensus 930 HPnIVkL~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~s-----ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIK 1003 (1182)
||++++++|.....+++|||++.+ +|..++...... .....+++..++.++.||+.||.|||+.+|+|||||
T Consensus 80 --~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 80 --NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred --CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 899999999999999999999985 677776544310 011148899999999999999999999999999999
Q ss_pred CccEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 001034 1004 PENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT--GNVLFQ 1076 (1182)
Q Consensus 1004 PeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT--Gr~PF~ 1076 (1182)
|+|||++. .+.++|+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 158 TRNCLVGK--NYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred hhceeecC--CCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 99999995 578999999998753322 223455778999999998889999999999999999998 778998
Q ss_pred CCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhccc
Q 001034 1077 NDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEI 1156 (1182)
Q Consensus 1077 g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~ 1156 (1182)
..+....+..+...+.... ...........+.++.+||.+||+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~l~~li~~cl~~ 279 (296)
T cd05051 236 HLTDQQVIENAGHFFRDDG------------------------------------RQIYLPRPPNCPKDIYELMLECWRR 279 (296)
T ss_pred CcChHHHHHHHHhcccccc------------------------------------ccccCCCccCCCHHHHHHHHHHhcc
Confidence 7666665555532111000 0000011123467899999999999
Q ss_pred CCCCCCCHHHHHc
Q 001034 1157 NPKKRPSASDALK 1169 (1182)
Q Consensus 1157 DPekRPTAeELLq 1169 (1182)
||.+|||+.+|++
T Consensus 280 ~p~~Rpt~~el~~ 292 (296)
T cd05051 280 DEEDRPTFREIHL 292 (296)
T ss_pred ChhcCCCHHHHHH
Confidence 9999999999976
No 291
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=6.5e-34 Score=307.46 Aligned_cols=253 Identities=20% Similarity=0.260 Sum_probs=197.0
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcE--EEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMD--VCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~--VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|++.+.||+|+||.||+|.++.++.. +|+|.++.. ......+.+|+.++.++. .|+||+++++++...
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-----~h~~iv~~~~~~~~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-----CCCCcceEEEEECCC
Confidence 35799999999999999999998887765 477766542 233456677888888883 245999999999999
Q ss_pred CeEEEEEEecc-cChHHHHhhhcccC----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC
Q 001034 944 EHLLIVCELLK-ANLYEFHKFNRESG----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY 1012 (1182)
Q Consensus 944 e~LyLVmEyL~-GsLld~Lk~~~~sg----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~ 1012 (1182)
..+|+||||+. ++|.+++....... ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~- 159 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE- 159 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC-
Confidence 99999999998 57888776543111 1124788999999999999999999999999999999999984
Q ss_pred CCceEEEecCCCccccCCCccc--ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh
Q 001034 1013 SRCEVKVIDLGSSCFETDHLCS--YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIG 1089 (1182)
Q Consensus 1013 ~dG~IKLiDFGLA~~~~~~~ss--~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ 1089 (1182)
++.+||+|||++......... ...+..|+|||++.+..++.++|||||||++|+|++ |.+||...+..+....+..
T Consensus 160 -~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~ 238 (303)
T cd05088 160 -NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 238 (303)
T ss_pred -CCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence 677999999998643222111 223567999999988889999999999999999998 9999987666554443310
Q ss_pred hcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1090 IIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1090 ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. . . ......+..+.+||.+||+.+|.+||++.++|+
T Consensus 239 ~~----------------------------------~--~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 275 (303)
T cd05088 239 GY----------------------------------R--L-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 275 (303)
T ss_pred CC----------------------------------c--C-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 0 0 001124678999999999999999999999997
Q ss_pred C
Q 001034 1170 H 1170 (1182)
Q Consensus 1170 H 1170 (1182)
+
T Consensus 276 ~ 276 (303)
T cd05088 276 S 276 (303)
T ss_pred H
Confidence 5
No 292
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-33 Score=305.09 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=199.4
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECC-------CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLH-------TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRL 936 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~-------TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL 936 (1182)
+..++|.+.+.||+|+||.||+|++.. +...+|+|++.... .....+..|+.+++.+. .|+||+++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~ 89 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINL 89 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-----CCCCEeeE
Confidence 345789999999999999999998643 33579999997542 33456777888888873 24599999
Q ss_pred EEEEEecCeEEEEEEeccc-ChHHHHhhhcccC----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCc
Q 001034 937 YDYFYYREHLLIVCELLKA-NLYEFHKFNRESG----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPE 1005 (1182)
Q Consensus 937 ~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sg----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPe 1005 (1182)
++++.....+|+||||+.+ +|.+++......+ ....++...+..++.||+.||.|||++|++||||||+
T Consensus 90 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~ 169 (307)
T cd05098 90 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR 169 (307)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence 9999999999999999984 7888876543211 1123788889999999999999999999999999999
Q ss_pred cEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDS 1079 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d 1079 (1182)
|||++. ++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 170 Nill~~--~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~ 247 (307)
T cd05098 170 NVLVTE--DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 247 (307)
T ss_pred heEEcC--CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence 999984 678999999998754321 111233568999999999899999999999999999998 899998766
Q ss_pred HHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCC
Q 001034 1080 PATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPK 1159 (1182)
Q Consensus 1080 ~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPe 1159 (1182)
..+....+.... . .......+..+.+||.+||..+|.
T Consensus 248 ~~~~~~~~~~~~-------------------------------------~------~~~~~~~~~~~~~li~~~l~~~p~ 284 (307)
T cd05098 248 VEELFKLLKEGH-------------------------------------R------MDKPSNCTNELYMMMRDCWHAVPS 284 (307)
T ss_pred HHHHHHHHHcCC-------------------------------------C------CCCCCcCCHHHHHHHHHHcccChh
Confidence 655444432000 0 001123467899999999999999
Q ss_pred CCCCHHHHHcC
Q 001034 1160 KRPSASDALKH 1170 (1182)
Q Consensus 1160 kRPTAeELLqH 1170 (1182)
+|||+.+++++
T Consensus 285 ~Rps~~evl~~ 295 (307)
T cd05098 285 QRPTFKQLVED 295 (307)
T ss_pred hCcCHHHHHHH
Confidence 99999999874
No 293
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=9.7e-34 Score=301.32 Aligned_cols=253 Identities=21% Similarity=0.311 Sum_probs=199.2
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHT-----GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~T-----Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++.+.||+|+||.||++..+.. ...+|+|++.... .....+.+|+.+++.+. .|+||+++++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~~~ 85 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLGVC 85 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEEEE
Confidence 46799999999999999999987643 3789999987542 23345778888888873 245999999999
Q ss_pred EecCeEEEEEEeccc-ChHHHHhhhccc----------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEE
Q 001034 941 YYREHLLIVCELLKA-NLYEFHKFNRES----------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV 1009 (1182)
Q Consensus 941 qd~e~LyLVmEyL~G-sLld~Lk~~~~s----------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILI 1009 (1182)
.....+++||||+.+ +|..++...... .....+++..+..++.||+.||.|||+.+|+||||||.|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 999999999999984 677776543210 112248888999999999999999999999999999999999
Q ss_pred ccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 001034 1010 KSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATL 1083 (1182)
Q Consensus 1010 Ds~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~el 1083 (1182)
+. ++.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.
T Consensus 166 ~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 243 (293)
T cd05053 166 TE--DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 243 (293)
T ss_pred cC--CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH
Confidence 84 778999999998764332 112234567999999999999999999999999999997 9999988776655
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS 1163 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT 1163 (1182)
+..+.... .+ ......+..+.+||.+||..||.+|||
T Consensus 244 ~~~~~~~~-------------------------------------~~------~~~~~~~~~~~~li~~~l~~~p~~Rps 280 (293)
T cd05053 244 FKLLKEGY-------------------------------------RM------EKPQNCTQELYHLMRDCWHEVPSQRPT 280 (293)
T ss_pred HHHHHcCC-------------------------------------cC------CCCCCCCHHHHHHHHHHcccCcccCcC
Confidence 54442000 00 011234678999999999999999999
Q ss_pred HHHHHcC
Q 001034 1164 ASDALKH 1170 (1182)
Q Consensus 1164 AeELLqH 1170 (1182)
+.++|++
T Consensus 281 ~~eil~~ 287 (293)
T cd05053 281 FKQLVED 287 (293)
T ss_pred HHHHHHH
Confidence 9999974
No 294
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.4e-33 Score=292.02 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=198.7
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.+.||.|+||.||+|.+..+++.||+|.++... .....+.+|+++++.+.|. +|++++++|....
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~------~i~~~~~~~~~~~ 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHP------NVIKYLASFIENN 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCC------CeeeeeeeeecCC
Confidence 57999999999999999999999999999999986422 2345677888988888654 8999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..++||||+.+ +|..++...... ...+++..+..++.+|+.||.|||+.||+|+||+|+||+++. ++.++|+|||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~--~~~~~l~d~~ 151 (267)
T cd08224 76 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA--TGVVKLGDLG 151 (267)
T ss_pred eEEEEEecCCCCCHHHHHHHhccc--CCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC--CCcEEEeccc
Confidence 99999999985 777776543221 224788999999999999999999999999999999999984 6779999999
Q ss_pred CccccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhcCCcchhh
Q 001034 1024 SSCFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP--ATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1024 LA~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~--~elLakIv~ilGp~Peem 1098 (1182)
++...... .....+++.|+|||.+.+..++.++|+|||||++|+|++|+.||..... ......+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-------- 223 (267)
T cd08224 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC-------- 223 (267)
T ss_pred eeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC--------
Confidence 98654332 2345688899999999998999999999999999999999999965431 1111111000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
..+ . ......+..+.+||.+||.++|.+|||+.+|++
T Consensus 224 -----------------------------~~~---~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 224 -----------------------------DYP---P--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred -----------------------------CCC---C--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000 0 001134678999999999999999999999875
No 295
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2e-33 Score=292.16 Aligned_cols=245 Identities=22% Similarity=0.351 Sum_probs=197.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
.+|++.+.||.|+||.||++.+. .+..+|+|++.........+..|+.+++.+.| |+|+++++++......|+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSH------PKLVQLYGVCTERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCC------CCeeeEEEEEccCCceEE
Confidence 46899999999999999999875 47789999988665445677889999998865 489999999999999999
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+.+ +|.+++..... .+++..++.++.|++.||.|||+.+++|+||||+||+++. ++.++|+|||++..
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~--~~~~~l~d~g~~~~ 149 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE--NQVVKVSDFGMTRF 149 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC--CCeEEECCCcceee
Confidence 9999986 56555543221 2788889999999999999999999999999999999984 67899999999875
Q ss_pred cCCCcc----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1028 ETDHLC----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1028 ~~~~~s----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
...... ...++..|+|||++.+..++.++|+|||||++|+|++ |+.||........+..+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~----------- 218 (256)
T cd05112 150 VLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF----------- 218 (256)
T ss_pred cccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-----------
Confidence 433211 2234568999999998899999999999999999998 999998777665555442100
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.... ....+..+.+|+.+||+.+|.+|||+.+++++
T Consensus 219 -----------------------~~~~---------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 219 -----------------------RLYK---------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred -----------------------CCCC---------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 0000 01235789999999999999999999999874
No 296
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=330.80 Aligned_cols=252 Identities=24% Similarity=0.425 Sum_probs=215.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
-|.|+.+||.|+||.||+|.++.+|+.+|||.+..+.+ .+.+..|+.|++++..+ ++|++|++|.....++||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD-LQEIIKEISIMQQC~S~------yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD-LQEIIKEISIMQQCKSK------YVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccch-HHHHHHHHHHHHHcCCc------hhhhhhhhhccCCceEee
Confidence 46778899999999999999999999999999987664 57788999999998665 999999999999999999
Q ss_pred EEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
||||+ |+..+.++.++.. +++.++..+++..+.+|+|||...-||||||..|||++ .+|+.||.|||.+..+
T Consensus 107 MEYCGAGSiSDI~R~R~K~-----L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN--T~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKP-----LSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN--TDGIAKLADFGVAGQL 179 (502)
T ss_pred hhhcCCCcHHHHHHHhcCC-----ccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc--ccchhhhhhccccchh
Confidence 99999 6788888776653 99999999999999999999999999999999999999 4888999999999765
Q ss_pred CC---CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccccc
Q 001034 1029 TD---HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDT 1105 (1182)
Q Consensus 1029 ~~---~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s 1105 (1182)
.+ ..++.+|||.|||||++....|+..+||||||++..||.-|++||..-.+...+..|
T Consensus 180 TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI------------------ 241 (502)
T KOG0574|consen 180 TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI------------------ 241 (502)
T ss_pred hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec------------------
Confidence 54 357889999999999999999999999999999999999999999876664433222
Q ss_pred chhhcccchhhhhhcchhhhhhccccccccccCCC-CCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1106 YKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLP-MGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1106 ~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~-~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
|...+-..+-+ .-+.+|.|||++||...|++|.||.+|++|||+++..
T Consensus 242 ------------------------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 242 ------------------------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred ------------------------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 11111000111 1267899999999999999999999999999998865
No 297
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.5e-33 Score=295.85 Aligned_cols=246 Identities=20% Similarity=0.279 Sum_probs=197.7
Q ss_pred CCEEEEEEeccCCceEEEEEEECCC---CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHT---GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~T---Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
++|++.+.||+|+||.||+|....+ ...||||+++... .....+..|+.+++.++| +||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~ 77 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH------PNIIRLEGVVTKS 77 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC------CCcceEeEEEecC
Confidence 5799999999999999999987644 4579999987543 233456778888888765 4899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+|+||||+.+ +|.+++..... .+++..+..++.||+.||.|||+++|+|+||||+|||++. ++.++|+||
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~--~~~~~l~df 150 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcC--CCCEEECcc
Confidence 999999999985 67777654321 3889999999999999999999999999999999999984 678999999
Q ss_pred CCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1023 GSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1023 GLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
|++....... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||...........+.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---- 226 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR---- 226 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC----
Confidence 9987654211 12234578999999999999999999999999999998 9999987666555544421000
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.+ .....+..+.+||.+||+.+|.+||++.+++++
T Consensus 227 --------------------------------~~-------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 227 --------------------------------LP-------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred --------------------------------CC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 00 012346789999999999999999999999874
No 298
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=8.1e-34 Score=307.87 Aligned_cols=246 Identities=20% Similarity=0.289 Sum_probs=193.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcE----EEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMD----VCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~----VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
..+|++.+.||+|+||.||+|++..++.. ||||+++... .....+..|+.+++.+.| |||+++++++.
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~~~g~~~ 79 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN------PHVCRLLGICL 79 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEc
Confidence 45799999999999999999998766664 8999987542 334567778888887754 48999999987
Q ss_pred ecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
.. ..++|++|+. |+|.+++..... .++...+..++.||+.||.|||+.||+||||||+|||++. .+.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~--~~~~kl~ 151 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKT--PQHVKIT 151 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecC--CCcEEEc
Confidence 64 5779999988 578887765432 2778889999999999999999999999999999999984 6779999
Q ss_pred cCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||+++...... .....+..|+|||++.+..++.++|||||||++|+|++ |..||.+....+....+. ....
T Consensus 152 DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~- 229 (316)
T cd05108 152 DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE-KGER- 229 (316)
T ss_pred cccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-CCCC-
Confidence 999997654321 12234567999999999999999999999999999997 999998766544322221 0000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. ...+..+..+.++|.+||..+|.+||++.+++.+
T Consensus 230 ----------------------------------~-------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 230 ----------------------------------L-------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ----------------------------------C-------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0 0112345789999999999999999999999986
No 299
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.8e-33 Score=290.15 Aligned_cols=244 Identities=23% Similarity=0.340 Sum_probs=198.8
Q ss_pred EEEEEEeccCCceEEEEEEECCCC----cEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTG----MDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TG----r~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
+++.+.||.|+||.||++++...+ ..||+|+++.... ....+..|+.+++.+.| +||+++++++....
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH------PNIVKLLGVCTEEE 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC------CchheEEEEEcCCC
Confidence 356789999999999999998766 8999999976653 45678889999988854 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..|+||||+.+ +|.+++...... .+++..+..++.||+.||.|||+.+++|+||||+||+++. .+.++|+|||
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~--~~~~~l~dfg 148 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGE--NLVVKISDFG 148 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEcc--CCeEEEcccC
Confidence 99999999985 677776643321 1788999999999999999999999999999999999994 6689999999
Q ss_pred CccccCCCcc----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1024 SSCFETDHLC----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1024 LA~~~~~~~s----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
++........ ...+++.|+|||.+.+..++.++|+|||||++|+|++ |++||...+....+..+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~------ 222 (258)
T smart00219 149 LSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR------ 222 (258)
T ss_pred CceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC------
Confidence 9875443211 1236788999999988889999999999999999998 8999988776666555421000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.......+..+.++|.+||..+|.+|||+.++++
T Consensus 223 -------------------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 223 -------------------------------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred -------------------------------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 0001124688999999999999999999999986
No 300
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5e-34 Score=302.06 Aligned_cols=251 Identities=18% Similarity=0.218 Sum_probs=196.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLH-----TGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~-----TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.+|++.+.||.|+||.||++.+.. .++.||||+++.... ....+..|+.++..+. ||||+++++++.
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~------h~~iv~~~~~~~ 78 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ------HPNIVCLLGVVT 78 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC------CCCcCeEEEEEc
Confidence 357788899999999999998754 357899999975432 2345666777777665 459999999999
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhccc----------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEc
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRES----------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVK 1010 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~s----------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILID 1010 (1182)
....+++++||+.+ +|..++...... .....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 99999999999985 666666432110 0112377888999999999999999999999999999999998
Q ss_pred cCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 001034 1011 SYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLL 1084 (1182)
Q Consensus 1011 s~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elL 1084 (1182)
. ++.+||+|||+++..... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+
T Consensus 159 ~--~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~ 236 (283)
T cd05091 159 D--KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVI 236 (283)
T ss_pred C--CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 4 677999999998754322 123345778999999998889999999999999999998 88999887776666
Q ss_pred HHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 001034 1085 ARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA 1164 (1182)
Q Consensus 1085 akIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA 1164 (1182)
..+..... .......+..+.+||.+||+.+|.+||++
T Consensus 237 ~~i~~~~~-------------------------------------------~~~~~~~~~~~~~li~~cl~~~p~~RP~~ 273 (283)
T cd05091 237 EMIRNRQV-------------------------------------------LPCPDDCPAWVYTLMLECWNEFPSRRPRF 273 (283)
T ss_pred HHHHcCCc-------------------------------------------CCCCCCCCHHHHHHHHHHhCCCcccCCCH
Confidence 55531100 00112356789999999999999999999
Q ss_pred HHHHcC
Q 001034 1165 SDALKH 1170 (1182)
Q Consensus 1165 eELLqH 1170 (1182)
.+++..
T Consensus 274 ~~i~~~ 279 (283)
T cd05091 274 KDIHSR 279 (283)
T ss_pred HHHHHH
Confidence 999874
No 301
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.2e-33 Score=297.25 Aligned_cols=246 Identities=21% Similarity=0.280 Sum_probs=192.4
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCc----EEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGM----DVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr----~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
...+|++++.||.|+||.||+|....+++ .||+|+++... .....+..|+.+++.+. |+||+++++++
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~ 78 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG------SPYVCRLLGIC 78 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcC------CCCCceEEEEE
Confidence 35689999999999999999999877776 48999987532 23445667777777664 45899999998
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
.. ...+++|+|+. |+|.+++..... .+++..+..++.||+.||.|||+.+|+||||||+|||++. .+.+||
T Consensus 79 ~~-~~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~--~~~~kL 150 (279)
T cd05109 79 LT-STVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKS--PNHVKI 150 (279)
T ss_pred cC-CCcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC--CCcEEE
Confidence 75 45789999998 578777754321 3888999999999999999999999999999999999984 667999
Q ss_pred ecCCCccccCCCcc-----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1020 IDLGSSCFETDHLC-----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1020 iDFGLA~~~~~~~s-----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp 1093 (1182)
+|||+++....... ...+++.|+|||.+.+..++.++|||||||++|||++ |.+||...........+... ..
T Consensus 151 ~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~ 229 (279)
T cd05109 151 TDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKG-ER 229 (279)
T ss_pred CCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-Cc
Confidence 99999875432211 1234567999999999999999999999999999998 99999776654443332100 00
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||..||.+||++.+++.
T Consensus 230 -----------------------------------~-------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 230 -----------------------------------L-------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred -----------------------------------C-------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 001234678999999999999999999999985
No 302
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.7e-33 Score=299.46 Aligned_cols=254 Identities=28% Similarity=0.369 Sum_probs=196.9
Q ss_pred CEEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEeccc-----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDL---HTGMDVCVKIIKNNK-----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk---~TGr~VAVKIIkk~k-----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.|++.+.||.|+||.||++++. .+++.||||++++.. .....+..|+.++..+.+ |++|+++++.|.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~-----~~~i~~~~~~~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRR-----CPFLVTLHYAFQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccC-----Ccchhhhheeee
Confidence 4889999999999999999864 467899999997542 223456678888888853 459999999999
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
....+|+||||+.+ +|..++.... .+++..++.++.|++.||.|||+.+++||||+|.||+++. ++.++|+
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~--~~~~~l~ 147 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDS--EGHVVLT 147 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC--CCCEEEE
Confidence 99999999999985 6666654322 2788899999999999999999999999999999999984 6779999
Q ss_pred cCCCccccCCC----cccccCCCcccchhhhcCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDH----LCSYVQSRSYRAPEVILGLS--YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~----~ss~vGTp~YmAPEVLlg~~--yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||++...... .....++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...........+...
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~---- 223 (288)
T cd05583 148 DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR---- 223 (288)
T ss_pred ECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH----
Confidence 99998653322 12346788999999987765 788999999999999999999999653322111111000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC---HHHHHcCC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS---ASDALKHP 1171 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT---AeELLqHP 1171 (1182)
+ ... . .......+..+.+||.+||+.||++||| +.++|+||
T Consensus 224 ---~--------------------------~~~-~------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 224 ---I--------------------------LKS-K------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ---H--------------------------Hcc-C------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 0 000 0 0011234678999999999999999998 56789999
Q ss_pred CCCCC
Q 001034 1172 WLSHP 1176 (1182)
Q Consensus 1172 WFk~~ 1176 (1182)
||+..
T Consensus 268 ~~~~~ 272 (288)
T cd05583 268 FFQGI 272 (288)
T ss_pred ccccC
Confidence 99875
No 303
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.8e-33 Score=299.13 Aligned_cols=251 Identities=18% Similarity=0.219 Sum_probs=198.2
Q ss_pred cCCEEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLH-----TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~-----TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++.+.||.|+||.||+|.+.. ++..||+|++.... .....+..|+.+++.+.| |||+++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h------~~iv~~~~~~ 77 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH------PNIVKLLGVC 77 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC------CchheEEEEE
Confidence 3679999999999999999998753 67889999987543 234567778888888854 4899999999
Q ss_pred EecCeEEEEEEeccc-ChHHHHhhhccc----------------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccC
Q 001034 941 YYREHLLIVCELLKA-NLYEFHKFNRES----------------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLK 1003 (1182)
Q Consensus 941 qd~e~LyLVmEyL~G-sLld~Lk~~~~s----------------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIK 1003 (1182)
....++|+||||+.+ +|.+++...... .....+++..+..++.||+.||.|||+.+++|||||
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 78 AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred cCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 999999999999985 787777643210 111237788899999999999999999999999999
Q ss_pred CccEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 001034 1004 PENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQN 1077 (1182)
Q Consensus 1004 PeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g 1077 (1182)
|+|||++. ++.++|+|||++...... ......+..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 158 p~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~ 235 (288)
T cd05050 158 TRNCLVGE--NMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG 235 (288)
T ss_pred HhheEecC--CCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999984 778999999998643222 112334667999999999999999999999999999997 8899987
Q ss_pred CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccC
Q 001034 1078 DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1078 ~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~D 1157 (1182)
.+..+.+..+... . ........+..+.+||.+||+.+
T Consensus 236 ~~~~~~~~~~~~~--~-----------------------------------------~~~~~~~~~~~l~~li~~~l~~~ 272 (288)
T cd05050 236 MAHEEVIYYVRDG--N-----------------------------------------VLSCPDNCPLELYNLMRLCWSKL 272 (288)
T ss_pred CCHHHHHHHHhcC--C-----------------------------------------CCCCCCCCCHHHHHHHHHHcccC
Confidence 7666555443200 0 00011234678999999999999
Q ss_pred CCCCCCHHHHHc
Q 001034 1158 PKKRPSASDALK 1169 (1182)
Q Consensus 1158 PekRPTAeELLq 1169 (1182)
|.+|||+.||++
T Consensus 273 p~~Rpt~~el~~ 284 (288)
T cd05050 273 PSDRPSFASINR 284 (288)
T ss_pred cccCCCHHHHHH
Confidence 999999999975
No 304
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2e-33 Score=302.90 Aligned_cols=263 Identities=16% Similarity=0.224 Sum_probs=189.0
Q ss_pred eeCceecCCEEEEEEeccCCceEEEEEEECCC---CcEEEEEEEeccchhhH-H-----HHHHHHHHHHhcCCCCCCCcc
Q 001034 862 VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHT---GMDVCVKIIKNNKDFFD-Q-----SLDEIKLLKYVNKHDPGDKYH 932 (1182)
Q Consensus 862 ~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~T---Gr~VAVKIIkk~k~~~d-q-----~l~EikILr~L~h~~~l~HPn 932 (1182)
.+.++..++|++.+.||+|+||.||+|.+..+ +..+|+|+......... . ...+...+..+.......|++
T Consensus 5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~ 84 (294)
T PHA02882 5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG 84 (294)
T ss_pred eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence 34556778999999999999999999998877 67788887543321110 0 001111112222222346889
Q ss_pred eEEEEEEEEecC----eEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEE
Q 001034 933 LLRLYDYFYYRE----HLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL 1008 (1182)
Q Consensus 933 IVkL~dsFqd~e----~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNIL 1008 (1182)
|+++++.+.... ..+++|+++..++..++..... +++..++.++.||+.||.|||+.+|+||||||+|||
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nil 158 (294)
T PHA02882 85 IPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKC------KNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIM 158 (294)
T ss_pred CCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhcc------CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 999998765543 4578899888777776654321 567788999999999999999999999999999999
Q ss_pred EccCCCceEEEecCCCccccCC----------CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 001034 1009 VKSYSRCEVKVIDLGSSCFETD----------HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQND 1078 (1182)
Q Consensus 1009 IDs~~dG~IKLiDFGLA~~~~~----------~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~ 1078 (1182)
++. ++.++|+|||+++.... ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 159 l~~--~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 159 VDG--NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred EcC--CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 984 67799999999865321 122346899999999999999999999999999999999999999875
Q ss_pred CH-HHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccC
Q 001034 1079 SP-ATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1079 d~-~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~D 1157 (1182)
.. ...+..... .++. .+. .+ ....+..+..+.+|+..|+..+
T Consensus 237 ~~~~~~~~~~~~-------~~~~-----------------------~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~ 279 (294)
T PHA02882 237 GHNGNLIHAAKC-------DFIK-----------------------RLH--EG-----KIKIKNANKFIYDFIECVTKLS 279 (294)
T ss_pred ccchHHHHHhHH-------HHHH-----------------------Hhh--hh-----hhccCCCCHHHHHHHHHHHhCC
Confidence 32 222211100 0000 000 00 0012234688999999999999
Q ss_pred CCCCCCHHHHHc
Q 001034 1158 PKKRPSASDALK 1169 (1182)
Q Consensus 1158 PekRPTAeELLq 1169 (1182)
|.+||++.++++
T Consensus 280 ~~~rp~~~~l~~ 291 (294)
T PHA02882 280 YEEKPDYDALIK 291 (294)
T ss_pred CCCCCCHHHHHH
Confidence 999999999986
No 305
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=6.6e-34 Score=314.52 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=194.3
Q ss_pred cCCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++.+.||.|+||.||+|... .+++.||+|+++... .....+..|+.+++.+. .|+||++++++|
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-----~h~niv~~~~~~ 80 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-----HHLNVVNLLGAC 80 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-----cCcchhheeeeE
Confidence 468999999999999999999754 346889999987532 23456677888888873 245999999988
Q ss_pred Eec-CeEEEEEEeccc-ChHHHHhhhcccC--------------------------------------------------
Q 001034 941 YYR-EHLLIVCELLKA-NLYEFHKFNRESG-------------------------------------------------- 968 (1182)
Q Consensus 941 qd~-e~LyLVmEyL~G-sLld~Lk~~~~sg-------------------------------------------------- 968 (1182)
... ..+++||||+++ +|.+++.......
T Consensus 81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 754 678999999995 6766665432100
Q ss_pred -----CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC-----cccccCC
Q 001034 969 -----GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQS 1038 (1182)
Q Consensus 969 -----gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGT 1038 (1182)
....+++..+..++.||+.||.|||++||+||||||+|||++. ++.++|+|||++...... .....++
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~--~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~ 238 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRKGDARLP 238 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeC--CCcEEEeccccchhcccCcchhhccCCCCC
Confidence 0114788889999999999999999999999999999999994 678999999999764321 1233456
Q ss_pred CcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhh
Q 001034 1039 RSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYE 1117 (1182)
Q Consensus 1039 p~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~e 1117 (1182)
..|+|||++.+..++.++|||||||++|+|++ |..||.+....+.+...+.. .
T Consensus 239 ~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-----------~--------------- 292 (337)
T cd05054 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKE-----------G--------------- 292 (337)
T ss_pred ccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhc-----------c---------------
Confidence 78999999999999999999999999999998 99999764433322222100 0
Q ss_pred hhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1118 RNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1118 r~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
... ......+.++.+++.+||+.+|++||++.+|++|
T Consensus 293 -------~~~---------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 293 -------TRM---------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred -------CCC---------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000 0012346789999999999999999999999985
No 306
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=334.32 Aligned_cols=248 Identities=29% Similarity=0.469 Sum_probs=210.4
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
++||.|-||+||-++++++|+.||||+|.+-+ ....+..+|+.||+.+.|+ .||.|...|+..+.+++|||
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HP------GiV~le~M~ET~ervFVVME 643 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHP------GIVNLECMFETPERVFVVME 643 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCC------CeeEEEEeecCCceEEEEeh
Confidence 48999999999999999999999999998643 3446778999999998665 89999999999999999999
Q ss_pred ecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC-ceEEEecCCCccccCC
Q 001034 952 LLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR-CEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d-G~IKLiDFGLA~~~~~ 1030 (1182)
-+.|++++.+...... .+++...++++.||+.||.|||-++|+|+||||+|||+.+... -++||||||+|++..+
T Consensus 644 Kl~GDMLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE 719 (888)
T KOG4236|consen 644 KLHGDMLEMILSSEKG----RLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE 719 (888)
T ss_pred hhcchHHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence 9999999988866432 2899999999999999999999999999999999999986433 3799999999998876
Q ss_pred C--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhcCCcchhhhhcccccch
Q 001034 1031 H--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQND-SPATLLARVIGIIGPIEQGMLAKGRDTYK 1107 (1182)
Q Consensus 1031 ~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~-d~~elLakIv~ilGp~PeemL~~~k~s~k 1107 (1182)
. ..+.+|||.|+|||++..+.|+...|+||+|||+|--|.|.+||.-+ +..++++...
T Consensus 720 ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa------------------- 780 (888)
T KOG4236|consen 720 KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA------------------- 780 (888)
T ss_pred hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc-------------------
Confidence 5 45789999999999999999999999999999999999999999643 2222222211
Q ss_pred hhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1108 YFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1108 ~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
+..|.. ....++.+++|||..+|+..-++|.+....|.|||+++
T Consensus 781 -------------------FMyPp~-----PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~ 824 (888)
T KOG4236|consen 781 -------------------FMYPPN-----PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 824 (888)
T ss_pred -------------------cccCCC-----chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhc
Confidence 111111 12245789999999999999999999999999999986
No 307
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.6e-33 Score=292.77 Aligned_cols=246 Identities=19% Similarity=0.266 Sum_probs=195.3
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCc---EEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGM---DVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr---~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
.++|+..+.||+|+||.||+|.++.++. .+|||.++... .....+..|+.+++.+.| +||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~ 77 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSH------HNIIRLEGVVTK 77 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCC------CCeeEEEEEEcc
Confidence 4578999999999999999999876655 79999987542 334566778888877754 489999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..++|+||||+.+ +|..++.... ..+++..+..++.|++.||.|||+.|++|+||||+|||++. ++.+||+|
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~--~~~~kl~d 150 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNS--NLECKVSD 150 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcC--CCcEEECC
Confidence 9999999999996 5656654322 13788899999999999999999999999999999999984 67899999
Q ss_pred CCCccccCCCcc------cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1022 LGSSCFETDHLC------SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1022 FGLA~~~~~~~s------s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
||++........ ....++.|+|||++....++.++|||||||++|+|++ |+.||...+.......+.... .
T Consensus 151 fg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~- 228 (268)
T cd05063 151 FGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-R- 228 (268)
T ss_pred CccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-C-
Confidence 999875432211 1122457999999998889999999999999999997 999998777666555553110 0
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.| .....+..+.+||.+||+.+|.+||++.+|++
T Consensus 229 ----------------------------------~~-------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 229 ----------------------------------LP-------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ----------------------------------CC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00 01123578999999999999999999999986
No 308
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.4e-33 Score=338.83 Aligned_cols=145 Identities=23% Similarity=0.356 Sum_probs=124.6
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|.+++.||+|+||.||+|.+..+++.||||+++... .....+..|+.+++.+.| +||+++++.+...
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h------p~Iv~~~~~~~~~ 76 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS------PFIVHLYYSLQSA 76 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC------CCcCeEEEEEEEC
Confidence 368999999999999999999999999999999997643 223556677888877654 5899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++||||||+.| +|..++.... .+.+..++.|+.||+.||.|||.++||||||||+||||+. .+.+||+||
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~--~g~vkL~DF 148 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN--EGHIKLTDF 148 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC--CCCEEEEeC
Confidence 999999999974 6777765432 2788899999999999999999999999999999999984 678999999
Q ss_pred CCcc
Q 001034 1023 GSSC 1026 (1182)
Q Consensus 1023 GLA~ 1026 (1182)
|+++
T Consensus 149 Gls~ 152 (669)
T cd05610 149 GLSK 152 (669)
T ss_pred CCCc
Confidence 9864
No 309
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3e-33 Score=299.69 Aligned_cols=258 Identities=19% Similarity=0.278 Sum_probs=196.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECC----------------CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCC
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLH----------------TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGD 929 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~----------------TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~ 929 (1182)
.++|++.+.||.|+||.||+|.+.. +...+|+|+++... .....+..|+.+++.+.|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~---- 79 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDP---- 79 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCC----
Confidence 4679999999999999999986432 34579999997542 3345677899998888654
Q ss_pred CcceEEEEEEEEecCeEEEEEEeccc-ChHHHHhhhcccCC-----ccccCHHHHHHHHHHHHHHHHHHHhcCccccccC
Q 001034 930 KYHLLRLYDYFYYREHLLIVCELLKA-NLYEFHKFNRESGG-----EVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLK 1003 (1182)
Q Consensus 930 HPnIVkL~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sgg-----el~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIK 1003 (1182)
||+++++++.....+|+||||+.+ +|..++........ ...+++..+..++.||+.||.|||+.||+|+|||
T Consensus 80 --~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 80 --NIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred --CcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 899999999999999999999984 77777765332111 1237788899999999999999999999999999
Q ss_pred CccEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCC
Q 001034 1004 PENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT--GNVLFQ 1076 (1182)
Q Consensus 1004 PeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT--Gr~PF~ 1076 (1182)
|+|||++. ++.++|+|||++...... ......++.|+|||+..+..++.++|+|||||++|+|++ |..||.
T Consensus 158 p~Nili~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 158 TRNCLVGK--NYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred hheEEEcC--CCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 99999984 678999999998754322 112334678999999988899999999999999999998 778998
Q ss_pred CCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhccc
Q 001034 1077 NDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEI 1156 (1182)
Q Consensus 1077 g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~ 1156 (1182)
..+..+.+......+ .... ... .. .....++..+.+||.+||+.
T Consensus 236 ~~~~~~~~~~~~~~~------------------~~~~---------~~~--~~-------~~~~~~~~~~~~li~~cl~~ 279 (296)
T cd05095 236 QLSDEQVIENTGEFF------------------RDQG---------RQV--YL-------PKPALCPDSLYKLMLSCWRR 279 (296)
T ss_pred ccChHHHHHHHHHHH------------------hhcc---------ccc--cC-------CCCCCCCHHHHHHHHHHcCC
Confidence 766655443321100 0000 000 00 11123467899999999999
Q ss_pred CCCCCCCHHHHHc
Q 001034 1157 NPKKRPSASDALK 1169 (1182)
Q Consensus 1157 DPekRPTAeELLq 1169 (1182)
||.+||++.+|++
T Consensus 280 ~p~~Rp~~~~i~~ 292 (296)
T cd05095 280 NAKERPSFQEIHA 292 (296)
T ss_pred CcccCCCHHHHHH
Confidence 9999999999875
No 310
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=318.84 Aligned_cols=272 Identities=29% Similarity=0.411 Sum_probs=204.9
Q ss_pred CCEEEE-EEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 869 GRYHVT-EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 869 drYeIl-k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
+-|++. +.||.|+|+.|--|....++..||||++.+.. .....+++|+.++.+++. |+||++|+++|.+...+
T Consensus 77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqg-----h~nilqLiefFEdd~~F 151 (463)
T KOG0607|consen 77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQG-----HKNILQLIEFFEDDTRF 151 (463)
T ss_pred HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcC-----CccHHHHHHHhcccceE
Confidence 345554 67999999999999999999999999998765 345678899999998874 56999999999999999
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC-CCceEEEecCCC
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY-SRCEVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~-~dG~IKLiDFGL 1024 (1182)
|||||-|.| .|+.-+..+. .|++.++..+++.|+.||.|||.+||.||||||+|||-... .-.-||||||.+
T Consensus 152 YLVfEKm~GGplLshI~~~~------~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 152 YLVFEKMRGGPLLSHIQKRK------HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEecccCchHHHHHHHhh------hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccc
Confidence 999999996 4666555443 39999999999999999999999999999999999998642 234699999987
Q ss_pred ccccC----------CCcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 001034 1025 SCFET----------DHLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIG 1089 (1182)
Q Consensus 1025 A~~~~----------~~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ 1089 (1182)
..... ....+.+|+..|||||++. ...|+.+||.||||||+|-||+|++||.+.--.+- -.
T Consensus 226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC----GW 301 (463)
T KOG0607|consen 226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC----GW 301 (463)
T ss_pred ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC----Cc
Confidence 64211 1234568888999999974 23699999999999999999999999976321100 00
Q ss_pred hcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1090 IIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1090 ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
-.|+... .-...+++..++ -.+.+|... ...++.++++||+.+|..||.+|.+|.++|+
T Consensus 302 drGe~Cr-------------~CQ~~LFesIQE---GkYeFPdkd-----WahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 302 DRGEVCR-------------VCQNKLFESIQE---GKYEFPDKD-----WAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred cCCCccH-------------HHHHHHHHHHhc---cCCcCChhh-----hHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 0000000 000011111111 012223222 2345889999999999999999999999999
Q ss_pred CCCCCCC
Q 001034 1170 HPWLSHP 1176 (1182)
Q Consensus 1170 HPWFk~~ 1176 (1182)
|||++..
T Consensus 361 hPw~~~~ 367 (463)
T KOG0607|consen 361 HPWVQRC 367 (463)
T ss_pred Ccccccc
Confidence 9999764
No 311
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.9e-33 Score=298.21 Aligned_cols=250 Identities=22% Similarity=0.277 Sum_probs=197.7
Q ss_pred CCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccch-hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNKD-FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k~-~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
.+|.+.+.||.|+||.||+|++. .++..+++|.+..... ....+.+|+.+++.+.|+ ||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~ 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHE------HIVKFYGVCGD 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCC------CcceEEEEEcc
Confidence 46899999999999999999853 3556799999875542 234567788888887654 89999999999
Q ss_pred cCeEEEEEEecc-cChHHHHhhhccc----------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc
Q 001034 943 REHLLIVCELLK-ANLYEFHKFNRES----------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS 1011 (1182)
Q Consensus 943 ~e~LyLVmEyL~-GsLld~Lk~~~~s----------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs 1011 (1182)
...+++||||+. ++|.+++...... .....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA 158 (291)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEcc
Confidence 999999999997 5777777643211 01123788899999999999999999999999999999999994
Q ss_pred CCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 001034 1012 YSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLA 1085 (1182)
Q Consensus 1012 ~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLa 1085 (1182)
++.++|+|||+++..... .....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+.+.
T Consensus 159 --~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~ 236 (291)
T cd05094 159 --NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 236 (291)
T ss_pred --CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 678999999998754322 123455788999999999999999999999999999999 999998877665544
Q ss_pred HHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 001034 1086 RVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSAS 1165 (1182)
Q Consensus 1086 kIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAe 1165 (1182)
.+.... . + ......+..+.+||.+||+.+|.+|||+.
T Consensus 237 ~~~~~~--~-----------------------------------~------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 273 (291)
T cd05094 237 CITQGR--V-----------------------------------L------ERPRVCPKEVYDIMLGCWQREPQQRLNIK 273 (291)
T ss_pred HHhCCC--C-----------------------------------C------CCCccCCHHHHHHHHHHcccChhhCcCHH
Confidence 432100 0 0 00112467899999999999999999999
Q ss_pred HHHc
Q 001034 1166 DALK 1169 (1182)
Q Consensus 1166 ELLq 1169 (1182)
++++
T Consensus 274 ~v~~ 277 (291)
T cd05094 274 EIYK 277 (291)
T ss_pred HHHH
Confidence 9986
No 312
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.6e-33 Score=302.04 Aligned_cols=252 Identities=21% Similarity=0.327 Sum_probs=198.5
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHD-----LHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkD-----k~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
....++|.+.+.||+|+||.||++.+ ..++..||+|+++... .....+.+|+.+++++. .|+||++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~ 105 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-----NHENIVNLL 105 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-----CCCCcceEE
Confidence 34567899999999999999999975 3356689999987542 33456778999999883 244999999
Q ss_pred EEEEecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCce
Q 001034 938 DYFYYREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCE 1016 (1182)
Q Consensus 938 dsFqd~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~ 1016 (1182)
++|.....+|+||||+. ++|..++..... ..+++..+..++.||+.||.|||+.+|+|+||||+|||++ ..+.
T Consensus 106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~--~~~~ 179 (302)
T cd05055 106 GACTIGGPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT--HGKI 179 (302)
T ss_pred EEEecCCceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc--CCCe
Confidence 99999999999999998 567777654321 1278999999999999999999999999999999999998 4678
Q ss_pred EEEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhh
Q 001034 1017 VKVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGI 1090 (1182)
Q Consensus 1017 IKLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~i 1090 (1182)
++|+|||++....... ....+++.|+|||++.+..++.++|||||||++|+|++ |.+||........+.+++..
T Consensus 180 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~ 259 (302)
T cd05055 180 VKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKE 259 (302)
T ss_pred EEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHc
Confidence 9999999987543321 12345678999999999999999999999999999998 99999776544433332100
Q ss_pred cCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1091 IGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1091 lGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. .. . ......+..+.+||.+||.++|.+|||+.+|++
T Consensus 260 ~---------------------------------~~--~-------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 260 G---------------------------------YR--M-------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred C---------------------------------Cc--C-------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 00 0 001123678999999999999999999999986
No 313
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.9e-33 Score=291.08 Aligned_cols=247 Identities=23% Similarity=0.323 Sum_probs=198.4
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+..++|++.+.||+|+||.||++... .+..+|+|.+.........+.+|+.+++.+.|. +|+++++.+.. ..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~------~i~~~~~~~~~-~~ 74 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHD------KLVKLHAVVTK-EP 74 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCC------CcceEEEEEcC-CC
Confidence 45678999999999999999999854 556799999987665566788899999888655 89999999887 78
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
.|+||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.|++|+||||+||+++. .+.+||+|||+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~--~~~~~l~d~~~ 148 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA--SLVCKIADFGL 148 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCCcc
Confidence 899999997 57887776432 123778889999999999999999999999999999999984 77899999999
Q ss_pred ccccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1025 SCFETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1025 A~~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
+....... ....++..|+|||++....++.++|+|||||++|+|++ |++||...+.......+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-------- 220 (260)
T cd05073 149 ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGY-------- 220 (260)
T ss_pred eeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCC--------
Confidence 86543221 12234567999999998889999999999999999999 999998776655544432100
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
..+ .....+..+.+||.+||+.+|.+||++.++++
T Consensus 221 ----------------------------~~~-------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 221 ----------------------------RMP-------RPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ----------------------------CCC-------CcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 000 11234678999999999999999999999875
No 314
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.7e-33 Score=300.13 Aligned_cols=255 Identities=20% Similarity=0.320 Sum_probs=200.8
Q ss_pred eecCCEEEEEEeccCCceEEEEEEEC-------CCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDL-------HTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRL 936 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk-------~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL 936 (1182)
+..++|.+.+.||.|+||.||+|+.. ..+..||+|++... ......+..|+.+++.+. .|+||+++
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~ 86 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINL 86 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-----cCCCchhe
Confidence 44678999999999999999999752 23557999998753 233456778889888873 24599999
Q ss_pred EEEEEecCeEEEEEEeccc-ChHHHHhhhcccC----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCc
Q 001034 937 YDYFYYREHLLIVCELLKA-NLYEFHKFNRESG----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPE 1005 (1182)
Q Consensus 937 ~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sg----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPe 1005 (1182)
++++.....+|+||||+.+ +|..++....... ....++...+..++.||+.||.|||++||+||||||+
T Consensus 87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~ 166 (304)
T cd05101 87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR 166 (304)
T ss_pred eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence 9999999999999999985 7777776543211 1123778889999999999999999999999999999
Q ss_pred cEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDS 1079 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d 1079 (1182)
|||++. ++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 167 Nili~~--~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 167 NVLVTE--NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred eEEEcC--CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 999984 678999999998754322 122345678999999999899999999999999999998 889998877
Q ss_pred HHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCC
Q 001034 1080 PATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPK 1159 (1182)
Q Consensus 1080 ~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPe 1159 (1182)
..++...+..... . ......+..+.+||.+||..+|.
T Consensus 245 ~~~~~~~~~~~~~----------------------------------~---------~~~~~~~~~~~~li~~cl~~~p~ 281 (304)
T cd05101 245 VEELFKLLKEGHR----------------------------------M---------DKPANCTNELYMMMRDCWHAIPS 281 (304)
T ss_pred HHHHHHHHHcCCc----------------------------------C---------CCCCCCCHHHHHHHHHHcccChh
Confidence 6665554420000 0 00123468899999999999999
Q ss_pred CCCCHHHHHcC
Q 001034 1160 KRPSASDALKH 1170 (1182)
Q Consensus 1160 kRPTAeELLqH 1170 (1182)
+|||+.++++.
T Consensus 282 ~Rps~~e~l~~ 292 (304)
T cd05101 282 HRPTFKQLVED 292 (304)
T ss_pred hCCCHHHHHHH
Confidence 99999999874
No 315
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.9e-33 Score=291.97 Aligned_cols=236 Identities=19% Similarity=0.249 Sum_probs=187.5
Q ss_pred EeccCCceEEEEEEE--CCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 876 YLGSAAFSKAIQAHD--LHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkD--k~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
.||+|+||.||+|.. +.++..+|+|+++... .....+..|+.+++.+.| +||+++++++. ....++||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~-~~~~~lv~ 74 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDN------PYIVRMIGICE-AESWMLVM 74 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCC------CCcceEEEEEc-CCCcEEEE
Confidence 589999999999964 5678899999987542 334567788888888754 48999999875 45779999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||+.+ .|.+++.... .+++..+..++.||+.||.|||++||+||||||.|||++. ++.+||+|||++....
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~--~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 75 ELAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVT--QHYAKISDFGLSKALG 146 (257)
T ss_pred ecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcC--CCeEEECCCccccccC
Confidence 99995 5777765432 2788999999999999999999999999999999999994 6789999999987543
Q ss_pred CCc------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcc
Q 001034 1030 DHL------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKG 1102 (1182)
Q Consensus 1030 ~~~------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~ 1102 (1182)
... ....+++.|+|||++....++.++|+|||||++|+|++ |.+||...........+.....
T Consensus 147 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~---------- 216 (257)
T cd05116 147 ADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER---------- 216 (257)
T ss_pred CCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC----------
Confidence 321 12233578999999988889999999999999999998 9999988776655544421000
Q ss_pred cccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1103 RDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1103 k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
+ ......+..+.+||.+||+.||.+||++.+|.+
T Consensus 217 ---------------------------~------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 217 ---------------------------M------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred ---------------------------C------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 0 011235688999999999999999999999875
No 316
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5e-33 Score=296.64 Aligned_cols=249 Identities=27% Similarity=0.368 Sum_probs=195.1
Q ss_pred CEEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLH-----TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~-----TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
+|++.+.||+|+||.||+|++.. ....+|+|.+.... .....+..|+.+++.+. ||||+++++.|..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~ 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN------HPHVIKLYGACSQ 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC------CCCEeeEEEEEec
Confidence 47889999999999999998753 33579999887543 23456778888888875 4589999999999
Q ss_pred cCeEEEEEEecc-cChHHHHhhhccc------------------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccC
Q 001034 943 REHLLIVCELLK-ANLYEFHKFNRES------------------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLK 1003 (1182)
Q Consensus 943 ~e~LyLVmEyL~-GsLld~Lk~~~~s------------------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIK 1003 (1182)
....|+||||+. ++|.+++...... .....+++..+..++.||+.||.|||+.+|+|||||
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 999999999999 5677766543211 111237888999999999999999999999999999
Q ss_pred CccEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 001034 1004 PENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQN 1077 (1182)
Q Consensus 1004 PeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g 1077 (1182)
|+|||++. ++.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 155 p~nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 155 ARNVLVAE--GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred hheEEEcC--CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999984 678999999998753221 122345678999999998899999999999999999998 9999987
Q ss_pred CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccC
Q 001034 1078 DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1078 ~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~D 1157 (1182)
..+..+...+.... .. .....++..+++||.+||+.+
T Consensus 233 ~~~~~~~~~~~~~~----------------------------------~~---------~~~~~~~~~~~~~i~~cl~~~ 269 (290)
T cd05045 233 IAPERLFNLLKTGY----------------------------------RM---------ERPENCSEEMYNLMLTCWKQE 269 (290)
T ss_pred CCHHHHHHHHhCCC----------------------------------CC---------CCCCCCCHHHHHHHHHHccCC
Confidence 76655443331000 00 011234678999999999999
Q ss_pred CCCCCCHHHHHc
Q 001034 1158 PKKRPSASDALK 1169 (1182)
Q Consensus 1158 PekRPTAeELLq 1169 (1182)
|.+||++.+|++
T Consensus 270 P~~Rp~~~~i~~ 281 (290)
T cd05045 270 PDKRPTFADISK 281 (290)
T ss_pred cccCCCHHHHHH
Confidence 999999999986
No 317
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.9e-33 Score=300.38 Aligned_cols=253 Identities=21% Similarity=0.306 Sum_probs=198.5
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECC-------CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLH-------TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~-------TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
..++|.+.+.||.|+||.||+|.+.. ....+|+|+++... .....+..|+.+++.+. .||||++++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~ 84 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-----KHKNIINLL 84 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCCeeeEE
Confidence 34689999999999999999998642 34579999987542 33456778888888774 255999999
Q ss_pred EEEEecCeEEEEEEeccc-ChHHHHhhhccc----------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCcc
Q 001034 938 DYFYYREHLLIVCELLKA-NLYEFHKFNRES----------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPEN 1006 (1182)
Q Consensus 938 dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~s----------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeN 1006 (1182)
+++.....+|+||||+.+ +|.+++...... .....+++..+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N 164 (314)
T cd05099 85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164 (314)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence 999999999999999984 677777654311 011237888899999999999999999999999999999
Q ss_pred EEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Q 001034 1007 ILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSP 1080 (1182)
Q Consensus 1007 ILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~ 1080 (1182)
||++. ++.+||+|||+++..... .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 165 ill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 165 VLVTE--DNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEEcC--CCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 99984 678999999999754322 112233467999999999899999999999999999999 8999988776
Q ss_pred HHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC
Q 001034 1081 ATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK 1160 (1182)
Q Consensus 1081 ~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek 1160 (1182)
...+..+.... . .......+..+.+||.+||..+|.+
T Consensus 243 ~~~~~~~~~~~-------------------------------------~------~~~~~~~~~~l~~li~~cl~~~p~~ 279 (314)
T cd05099 243 EELFKLLREGH-------------------------------------R------MDKPSNCTHELYMLMRECWHAVPTQ 279 (314)
T ss_pred HHHHHHHHcCC-------------------------------------C------CCCCCCCCHHHHHHHHHHcCCCccc
Confidence 66555542100 0 0011234678999999999999999
Q ss_pred CCCHHHHHc
Q 001034 1161 RPSASDALK 1169 (1182)
Q Consensus 1161 RPTAeELLq 1169 (1182)
|||+.++++
T Consensus 280 Rps~~~ll~ 288 (314)
T cd05099 280 RPTFKQLVE 288 (314)
T ss_pred CcCHHHHHH
Confidence 999999886
No 318
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8.3e-34 Score=295.94 Aligned_cols=228 Identities=21% Similarity=0.265 Sum_probs=182.8
Q ss_pred CCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc-ChH
Q 001034 880 AAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA-NLY 958 (1182)
Q Consensus 880 GaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G-sLl 958 (1182)
|.||.||+|+++.+++.||+|+++..... ..+...+... .||||+++++++....+.|+||||+.| +|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~----~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEY----SRERLTIIPH------CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhh----hhHHHHHHhc------CCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 89999999999999999999999765421 2232222222 367999999999999999999999985 677
Q ss_pred HHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCCcccccCC
Q 001034 959 EFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQS 1038 (1182)
Q Consensus 959 d~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ss~vGT 1038 (1182)
+++.... .+++..+..++.||+.||.|||+.||+||||||+||+++. ++.++|+|||.+...........++
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~l~df~~~~~~~~~~~~~~~~ 145 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDD--RGHIQLTYFSRWSEVEDSCDGEAVE 145 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC--CCCEEEecccchhccccccccCCcC
Confidence 7765432 2889999999999999999999999999999999999994 6779999999887665555555677
Q ss_pred CcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhh
Q 001034 1039 RSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYER 1118 (1182)
Q Consensus 1039 p~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er 1118 (1182)
..|+|||.+.+..++.++|+|||||++|+|++|+.||...... +..
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------------~~~------------------ 191 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------------INT------------------ 191 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------------ccc------------------
Confidence 8899999998888999999999999999999999887432110 000
Q ss_pred hcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHcCCCC
Q 001034 1119 NQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-----SDALKHPWL 1173 (1182)
Q Consensus 1119 ~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-----eELLqHPWF 1173 (1182)
.....+ ....+..+.+||.+||+.||.+||++ .++++||||
T Consensus 192 -----~~~~~~---------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 192 -----HTTLNI---------PEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred -----ccccCC---------cccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 000001 12346889999999999999999996 999999998
No 319
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.7e-33 Score=290.13 Aligned_cols=237 Identities=22% Similarity=0.278 Sum_probs=189.0
Q ss_pred EEeccCCceEEEEEEECCCC---cEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTG---MDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TG---r~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||+|+||.||+|....++ ..+|+|.+..... ....+..|+.+++.+.| +||+++++++. ...+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~-~~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDH------PCIVRLIGVCK-GEPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCC------CCeeeEEEEEc-CCceEEE
Confidence 36899999999999876544 7899999986653 45567788888888754 48999999876 4578999
Q ss_pred EEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+. ++|.+++.... .+++..+..++.||+.||.|||..+++|+||||+|||++. ++.+||+|||+++..
T Consensus 74 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~--~~~~kl~df~~~~~~ 145 (257)
T cd05060 74 MELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN--RHQAKISDFGMSRAL 145 (257)
T ss_pred EEeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcC--CCcEEecccccccee
Confidence 99998 47887776443 2788999999999999999999999999999999999984 678999999998754
Q ss_pred CCCccc------ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1029 TDHLCS------YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1029 ~~~~ss------~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
...... ..++..|+|||.+.+..++.++|||||||++|+|++ |++||...+..+....+.... +
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-~-------- 216 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-R-------- 216 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-c--------
Confidence 332211 112457999999999899999999999999999998 999998776655544432100 0
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||..+|.+||++.+|++
T Consensus 217 ---------------------------~-------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 217 ---------------------------L-------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ---------------------------C-------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 011234678999999999999999999999986
No 320
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-34 Score=328.01 Aligned_cols=243 Identities=24% Similarity=0.342 Sum_probs=206.4
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+.+++.||+|-||+||++... ....||+|.++......+.+.+|+.+++.|+|. +||++++++.....+||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~------~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHE------KLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCccc------CeEEEEEEEecCCceEEEE
Confidence 444678999999999999853 334799999998777778899999999999876 8999999999988999999
Q ss_pred Eecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
|||. |+|+++++... ...+...+...|+.||+.|++||+++++|||||-..||||+. +..+||+|||+|+...
T Consensus 281 E~m~~GsLl~yLr~~~----~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~--~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTRE----GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDE--DLVVKISDFGLARLIG 354 (468)
T ss_pred EecccCcHHHHhhhcC----CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeecc--CceEEEcccccccccC
Confidence 9999 78999998622 223888999999999999999999999999999999999994 7789999999999655
Q ss_pred CCccc----ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1030 DHLCS----YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1030 ~~~ss----~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
+..+. ..-+..|.|||.+....++.++|||||||+||||+| |+.||.+.+..+++..+. ++.+
T Consensus 355 d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le------------~GyR 422 (468)
T KOG0197|consen 355 DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE------------RGYR 422 (468)
T ss_pred CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh------------ccCc
Confidence 44332 223667999999999999999999999999999999 999999999998888873 1110
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
-.+...++..+-+++..|+..+|++|||++.+..
T Consensus 423 -------------------------------lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~ 456 (468)
T KOG0197|consen 423 -------------------------------LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLRE 456 (468)
T ss_pred -------------------------------CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHH
Confidence 1123457899999999999999999999997654
No 321
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.1e-33 Score=304.36 Aligned_cols=254 Identities=20% Similarity=0.311 Sum_probs=199.0
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECC-------CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLH-------TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~-------TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
...+|++.+.||.|+||.||+|++.. ....||+|+++... .....+..|+.+++.+.. |+||++++
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~-----h~~iv~~~ 84 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGK-----HKNIINLL 84 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcC-----CCCeeeee
Confidence 34679999999999999999998643 23468999887532 334567789999888842 44999999
Q ss_pred EEEEecCeEEEEEEeccc-ChHHHHhhhcccC----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCcc
Q 001034 938 DYFYYREHLLIVCELLKA-NLYEFHKFNRESG----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPEN 1006 (1182)
Q Consensus 938 dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sg----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeN 1006 (1182)
++|.....+|+||||+.+ +|.+++......+ ....++...+..++.||+.||.|||++||+||||||+|
T Consensus 85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 164 (334)
T cd05100 85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN 164 (334)
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence 999999999999999985 7877776543211 12237778889999999999999999999999999999
Q ss_pred EEEccCCCceEEEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCH
Q 001034 1007 ILVKSYSRCEVKVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSP 1080 (1182)
Q Consensus 1007 ILIDs~~dG~IKLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~ 1080 (1182)
||++. ++.+||+|||+++...... ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 165 ill~~--~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 165 VLVTE--DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEEcC--CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99984 6789999999987543321 11233567999999999999999999999999999998 8999988776
Q ss_pred HHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC
Q 001034 1081 ATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK 1160 (1182)
Q Consensus 1081 ~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek 1160 (1182)
.+.+..+..... .......+..+.+||.+||+.+|.+
T Consensus 243 ~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~l~~li~~cl~~~p~~ 279 (334)
T cd05100 243 EELFKLLKEGHR-------------------------------------------MDKPANCTHELYMIMRECWHAVPSQ 279 (334)
T ss_pred HHHHHHHHcCCC-------------------------------------------CCCCCCCCHHHHHHHHHHcccChhh
Confidence 665554421000 0011234678999999999999999
Q ss_pred CCCHHHHHcC
Q 001034 1161 RPSASDALKH 1170 (1182)
Q Consensus 1161 RPTAeELLqH 1170 (1182)
|||+.++|++
T Consensus 280 Rps~~ell~~ 289 (334)
T cd05100 280 RPTFKQLVED 289 (334)
T ss_pred CcCHHHHHHH
Confidence 9999999986
No 322
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=4.7e-33 Score=290.26 Aligned_cols=242 Identities=24% Similarity=0.333 Sum_probs=195.3
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
++|++.+.||+|+||.||++. .+++.||+|+++... ....+.+|+.+++.+.| +||+++++++.. ..+|+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~~------~~i~~~~~~~~~-~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKLHH------KNLVRLLGVILH-NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhCCC------CCcCeEEEEEcC-CCcEE
Confidence 569999999999999999986 578899999997643 23567788888888765 489999999865 45799
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||||+.+ +|.+++..... ..+++..+..++.||+.||.|||+.|++||||||+|||++. ++.+||+|||++..
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~--~~~~kl~Dfg~~~~ 149 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE--DGVAKVSDFGLARV 149 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC--CCcEEECCCcccee
Confidence 9999984 78877764321 23788889999999999999999999999999999999984 67899999999876
Q ss_pred cCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1028 ETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1028 ~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
..........+..|+|||.+.+..++.++|+|||||++|+|++ |++||...+..+....+....
T Consensus 150 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------------- 214 (254)
T cd05083 150 GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY--------------- 214 (254)
T ss_pred ccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---------------
Confidence 5443334445678999999998899999999999999999998 999998776655443331100
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. .....++..+.+||.+||+.+|..||++.+++.
T Consensus 215 ---------------------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 215 ---------------------RM-------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred ---------------------CC-------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 001234688999999999999999999999986
No 323
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4e-33 Score=298.64 Aligned_cols=258 Identities=18% Similarity=0.254 Sum_probs=196.6
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCC--------------cEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCc
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTG--------------MDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKY 931 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TG--------------r~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HP 931 (1182)
.++|++.+.||+|+||.||+|.+..++ ..||+|+++... .....+.+|+++++.+.|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~------ 77 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNP------ 77 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCC------
Confidence 368999999999999999999875432 358999987642 3345677899999988654
Q ss_pred ceEEEEEEEEecCeEEEEEEeccc-ChHHHHhhhccc------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCC
Q 001034 932 HLLRLYDYFYYREHLLIVCELLKA-NLYEFHKFNRES------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKP 1004 (1182)
Q Consensus 932 nIVkL~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~s------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKP 1004 (1182)
||+++++++.....+|+||||+.+ +|.+++...... .....+++..+..++.||+.||.|||+.+++||||||
T Consensus 78 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 157 (295)
T cd05097 78 NIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLAT 157 (295)
T ss_pred CcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccCh
Confidence 899999999999999999999985 676666432110 0111267888899999999999999999999999999
Q ss_pred ccEEEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 001034 1005 ENILVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT--GNVLFQN 1077 (1182)
Q Consensus 1005 eNILIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT--Gr~PF~g 1077 (1182)
+|||++. ++.+||+|||++...... .....++..|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 158 ~Nill~~--~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 158 RNCLVGN--HYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hhEEEcC--CCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 9999984 677999999998653221 122344678999999999999999999999999999988 6788887
Q ss_pred CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccC
Q 001034 1078 DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1078 ~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~D 1157 (1182)
.+..+.+..+...+..... .......+..+..+.+||++||++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~l~~li~~~l~~~ 279 (295)
T cd05097 236 LSDEQVIENTGEFFRNQGR------------------------------------QIYLSQTPLCPSPVFKLMMRCWSRD 279 (295)
T ss_pred cChHHHHHHHHHhhhhccc------------------------------------cccCCCCCCCCHHHHHHHHHHcCCC
Confidence 7766655554321100000 0000011234678999999999999
Q ss_pred CCCCCCHHHHHc
Q 001034 1158 PKKRPSASDALK 1169 (1182)
Q Consensus 1158 PekRPTAeELLq 1169 (1182)
|.+||++.++++
T Consensus 280 p~~RPs~~~i~~ 291 (295)
T cd05097 280 IKDRPTFNKIHH 291 (295)
T ss_pred chhCcCHHHHHH
Confidence 999999999976
No 324
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=7.1e-33 Score=291.57 Aligned_cols=245 Identities=19% Similarity=0.271 Sum_probs=195.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCc---EEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGM---DVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr---~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.+|++.+.||+|+||.||+|.++.++. .+|+|.++... .....+..|+.+++.+. ||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~ 77 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTKS 77 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEecC
Confidence 579999999999999999999865543 79999986542 23456677888888775 45899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+|+||||+++ +|.+++.... ..++...+..++.||+.||.|||+.+++||||||+|||++. ++.++|+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~--~~~~~l~df 150 (267)
T cd05066 78 KPVMIVTEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS--NLVCKVSDF 150 (267)
T ss_pred CccEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECC--CCeEEeCCC
Confidence 999999999985 6777765432 13788899999999999999999999999999999999984 678999999
Q ss_pred CCccccCCCcc------cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1023 GSSCFETDHLC------SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1023 GLA~~~~~~~s------s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
|++........ ....+..|+|||++.+..++.++|+|||||++|+|++ |..||......+.+..+.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~--- 227 (267)
T cd05066 151 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR--- 227 (267)
T ss_pred CcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc---
Confidence 99875433211 1122467999999999899999999999999999886 9999987776655554421100
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.| .....+..+.+||.+||+.+|.+||++.++++
T Consensus 228 ---------------------------------~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 228 ---------------------------------LP-------APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred ---------------------------------CC-------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 00 11234678999999999999999999999986
No 325
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.5e-33 Score=294.22 Aligned_cols=259 Identities=22% Similarity=0.234 Sum_probs=190.9
Q ss_pred cCCE-EEEEEeccCCceEEEEEE----ECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRY-HVTEYLGSAAFSKAIQAH----DLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drY-eIlk~LGkGaFGeVyLAk----Dk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.+|| ++++.||.|+||+||++. ...++..||+|+++... .....+.+|+.+++.+.| |||+++++++
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~ 75 (283)
T cd05080 2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYH------ENIVKYKGCC 75 (283)
T ss_pred ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCC------CCEeeEEEEE
Confidence 3566 999999999999998865 34578899999997643 234566788899888855 4899999988
Q ss_pred Eec--CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 941 YYR--EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 941 qd~--e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
... ..+|+||||+.+ +|.+++... .+++..++.++.||+.||.|||+++|+||||||+|||++. ++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~--~~~~ 146 (283)
T cd05080 76 SEQGGKGLQLIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDN--DRLV 146 (283)
T ss_pred ecCCCceEEEEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcC--CCcE
Confidence 764 468999999986 566665432 2889999999999999999999999999999999999984 6789
Q ss_pred EEecCCCccccCCCc------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhc
Q 001034 1018 KVIDLGSSCFETDHL------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~il 1091 (1182)
+|+|||++....... ....++..|+|||++....++.++|||||||++|+|++|+.||...... +..+.
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~--- 221 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMI--- 221 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhh---
Confidence 999999987544321 1223466799999999888999999999999999999999998654321 11111
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
..... .. ... .+........ ........+..+.+||.+||+.+|.+|||+.++++
T Consensus 222 ~~~~~------~~--------~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 222 GPKQG------QM--------TVV--------RLIELLERGM-RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred ccccc------cc--------chh--------hhhhhhhcCC-CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000 00 000 0000000000 00112345689999999999999999999999986
No 326
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.7e-33 Score=290.99 Aligned_cols=245 Identities=20% Similarity=0.300 Sum_probs=195.4
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGM---DVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr---~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.|++.+.||+|+||.||+|..+.+++ .||||++... ......+..|+.+++.+.| |||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~~~ 77 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH------PNIIHLEGVVTKS 77 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC------cCcceEEEEECCC
Confidence 468999999999999999999877665 5999998753 3334567788888888754 5899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+++||||+.+ +|..++..... .+++..++.++.|++.||.|||++|++|+||||+|||++. ++.+||+||
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~--~~~~kl~df 150 (269)
T cd05065 78 RPVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNS--NLVCKVSDF 150 (269)
T ss_pred CceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcC--CCcEEECCC
Confidence 999999999986 56666554321 3788999999999999999999999999999999999984 678999999
Q ss_pred CCccccCCCcc-----ccc---CCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1023 GSSCFETDHLC-----SYV---QSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1023 GLA~~~~~~~s-----s~v---GTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp 1093 (1182)
|++........ ... .+..|+|||.+.+..++.++|||||||++|||++ |..||...+.......+.....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~- 229 (269)
T cd05065 151 GLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR- 229 (269)
T ss_pred ccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc-
Confidence 99865432211 111 1347999999999999999999999999999886 9999988776655554421000
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.| .....+..+.++|.+||+.+|.+||++.+|+.
T Consensus 230 -----------------------------------~~-------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 230 -----------------------------------LP-------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred -----------------------------------CC-------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 00 01234578899999999999999999999986
No 327
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7e-33 Score=294.64 Aligned_cols=250 Identities=23% Similarity=0.256 Sum_probs=196.5
Q ss_pred CCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
.+|++.++||+|+||.||+|... .++..+|+|.+.... .....+.+|+.+++.+.| +||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~ 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH------QHIVRFYGVCTE 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC------CCCceEEEEEec
Confidence 56888999999999999999743 356789999887543 334567788888888765 489999999999
Q ss_pred cCeEEEEEEeccc-ChHHHHhhhccc---------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC
Q 001034 943 REHLLIVCELLKA-NLYEFHKFNRES---------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY 1012 (1182)
Q Consensus 943 ~e~LyLVmEyL~G-sLld~Lk~~~~s---------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~ 1012 (1182)
...+|+||||+.+ +|.+++...... .....+++..+..++.||+.||.|||+.|++||||||+|||++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~- 157 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ- 157 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC-
Confidence 9999999999984 677776643210 00123788899999999999999999999999999999999984
Q ss_pred CCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 001034 1013 SRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLAR 1086 (1182)
Q Consensus 1013 ~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLak 1086 (1182)
++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||......+.+..
T Consensus 158 -~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~ 236 (280)
T cd05092 158 -GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC 236 (280)
T ss_pred -CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH
Confidence 678999999998643221 122334678999999999999999999999999999998 9999987666555444
Q ss_pred HHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHH
Q 001034 1087 VIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASD 1166 (1182)
Q Consensus 1087 Iv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeE 1166 (1182)
+..... . .....++..+.+||.+||+.||.+||++.+
T Consensus 237 ~~~~~~----------------------------------~---------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 273 (280)
T cd05092 237 ITQGRE----------------------------------L---------ERPRTCPPEVYAIMQGCWQREPQQRMVIKD 273 (280)
T ss_pred HHcCcc----------------------------------C---------CCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 321000 0 001234678999999999999999999999
Q ss_pred HHc
Q 001034 1167 ALK 1169 (1182)
Q Consensus 1167 LLq 1169 (1182)
|++
T Consensus 274 l~~ 276 (280)
T cd05092 274 IHS 276 (280)
T ss_pred HHH
Confidence 985
No 328
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=8.9e-33 Score=290.80 Aligned_cols=252 Identities=22% Similarity=0.288 Sum_probs=199.1
Q ss_pred CCEEEEEEeccCCceEEEEEEECC-----CCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLH-----TGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~-----TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.+|++++.||.|+||.||+|+.+. ..+.+|+|.+..... ....+..|+++++.+.|+ ||+++++++.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~------~iv~~~~~~~ 78 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHK------NVVRLLGLCR 78 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCc------ceeeeEEEEC
Confidence 578999999999999999999654 456799999875442 356788899999988654 8999999999
Q ss_pred ecCeEEEEEEecc-cChHHHHhhhcccCC---ccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 942 YREHLLIVCELLK-ANLYEFHKFNRESGG---EVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 942 d~e~LyLVmEyL~-GsLld~Lk~~~~sgg---el~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
.....|+||||+. ++|.+++........ ...+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~--~~~~ 156 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSS--QREV 156 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeC--CCcE
Confidence 9899999999998 578777765441110 114889999999999999999999999999999999999985 6789
Q ss_pred EEecCCCccccCCC----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcC
Q 001034 1018 KVIDLGSSCFETDH----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilG 1092 (1182)
+|+|||++...... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||........+..+...
T Consensus 157 ~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~-- 234 (275)
T cd05046 157 KVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG-- 234 (275)
T ss_pred EEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--
Confidence 99999998643221 123345677999999988889999999999999999999 88999765554444433100
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. +.. ......+..+.+||.+||+.+|.+|||+.+++.+
T Consensus 235 ~-------------------------------~~~---------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 235 K-------------------------------LEL---------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred C-------------------------------cCC---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 0 000 0012346789999999999999999999999874
No 329
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=9.7e-33 Score=291.57 Aligned_cols=244 Identities=21% Similarity=0.272 Sum_probs=190.8
Q ss_pred EeccCCceEEEEEEECCCCc--EEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDLHTGM--DVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr--~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||.|+||.||+|++..++. .+|+|.++.. ......+..|+.++..+.+ ||||++++++|.....+|+|||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~-----h~~iv~~~~~~~~~~~~~lv~e 76 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH-----HPNIINLLGACEHRGYLYLAIE 76 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhcc-----CCCeeeEEEEEecCCCceEEEE
Confidence 68999999999999988876 4688888743 3344567789999888842 4599999999999999999999
Q ss_pred ecc-cChHHHHhhhcccC----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 952 LLK-ANLYEFHKFNRESG----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 952 yL~-GsLld~Lk~~~~sg----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
|+. ++|.+++....... ....+++..+..++.||+.||.|||+.|++||||||+|||++. ++.+||+
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~--~~~~kl~ 154 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE--NYVAKIA 154 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcC--CCeEEEC
Confidence 998 57888776543111 1123788999999999999999999999999999999999984 7789999
Q ss_pred cCCCccccCCCcc--cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1021 DLGSSCFETDHLC--SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1021 DFGLA~~~~~~~s--s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
|||++........ ....+..|+|||++....++.++|+|||||++|+|++ |..||...+....+..+....
T Consensus 155 dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~------ 228 (270)
T cd05047 155 DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY------ 228 (270)
T ss_pred CCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC------
Confidence 9999853322111 1223567999999998899999999999999999997 999998766555444431000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. ......+..+.+||.+||..+|.+|||+.++++
T Consensus 229 ------------------------------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 229 ------------------------------RL-------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------------------------CC-------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 00 001124578999999999999999999999986
No 330
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=338.15 Aligned_cols=246 Identities=26% Similarity=0.442 Sum_probs=201.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEe-ccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE-ec--
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIK-NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY-YR-- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIk-k~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq-d~-- 943 (1182)
.-+++|.++|.+|||+.||+|++...+..||+|.+- .++...+.+.+|+.+++.|.. |+|||.+++... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~g-----h~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSG-----HKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcC-----CCceeeEeccccccccC
Confidence 357899999999999999999998888999999875 455667888999999999974 459999999432 21
Q ss_pred ----CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--ccccccCCccEEEccCCCce
Q 001034 944 ----EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG--LIHCDLKPENILVKSYSRCE 1016 (1182)
Q Consensus 944 ----e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G--IIHRDIKPeNILIDs~~dG~ 1016 (1182)
-.++|+||||. |+|.+++..+...+ |++.+++.|++++++||.+||.+. |||||||-+||||.. +++
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~----lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~--~g~ 184 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTR----LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA--DGN 184 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhcc----CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC--CCC
Confidence 35889999999 69999998665332 999999999999999999999998 999999999999994 778
Q ss_pred EEEecCCCccccCCCcc------------cccCCCcccchhhh---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Q 001034 1017 VKVIDLGSSCFETDHLC------------SYVQSRSYRAPEVI---LGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPA 1081 (1182)
Q Consensus 1017 IKLiDFGLA~~~~~~~s------------s~vGTp~YmAPEVL---lg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~ 1081 (1182)
+||||||.++....... ...-|+.|+|||++ .+.+++.++|||+|||+||-|+....||......
T Consensus 185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l 264 (738)
T KOG1989|consen 185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL 264 (738)
T ss_pred EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence 99999999875332221 12458999999997 5788999999999999999999999999764321
Q ss_pred HHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1082 TLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1082 elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
. |+ ..++.+|. ++.++..|.+||+.||+.||.+|
T Consensus 265 a----Il-----------------------------------ng~Y~~P~-------~p~ys~~l~~LI~~mL~~nP~~R 298 (738)
T KOG1989|consen 265 A----IL-----------------------------------NGNYSFPP-------FPNYSDRLKDLIRTMLQPNPDER 298 (738)
T ss_pred e----EE-----------------------------------eccccCCC-------CccHHHHHHHHHHHHhccCcccC
Confidence 1 10 11233332 35678999999999999999999
Q ss_pred CCHHHHHcC
Q 001034 1162 PSASDALKH 1170 (1182)
Q Consensus 1162 PTAeELLqH 1170 (1182)
|++.+++.+
T Consensus 299 PnI~Qv~~~ 307 (738)
T KOG1989|consen 299 PNIYQVLEE 307 (738)
T ss_pred CCHHHHHHH
Confidence 999998875
No 331
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=9.6e-33 Score=294.02 Aligned_cols=245 Identities=20% Similarity=0.281 Sum_probs=188.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcE----EEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMD----VCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~----VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.++|++++.||.|+||.||+|....+++. +++|.+.... .....+..|+.+++.+ .||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l------~h~~iv~~~~~~~ 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL------DHAYIVRLLGICP 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC------CCCCcceEEEEEC
Confidence 35789999999999999999998877774 6777765332 2233445555565554 4569999999875
Q ss_pred ecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
...+++|+||+. |+|.+++..... .+++..+..++.||+.||.|||+.+++||||||+|||++. ++.+||+
T Consensus 80 -~~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~--~~~~kl~ 151 (279)
T cd05111 80 -GASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKS--DSIVQIA 151 (279)
T ss_pred -CCccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEEc
Confidence 456789999998 678888764332 2888999999999999999999999999999999999984 6789999
Q ss_pred cCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||+++..... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.+.........+. . +..
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~-~~~ 229 (279)
T cd05111 152 DFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLE-K-GER 229 (279)
T ss_pred CCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-C-CCc
Confidence 99998754221 123346678999999999999999999999999999998 999998776544322221 0 000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+ .....+..+.++|.+||..||.+|||+.++++
T Consensus 230 ----------------------------------~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 230 ----------------------------------LA-------QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred ----------------------------------CC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 00 01123567899999999999999999999987
No 332
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-32 Score=289.65 Aligned_cols=246 Identities=21% Similarity=0.287 Sum_probs=194.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCC---CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHT---GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~T---Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..+|.+.+.||.|+||.||+|.+... ...||||.+.... ...+.+.+|+.+++.+.| +||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h------~~i~~~~~~~~~ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDH------PHIVKLIGVITE 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCC------CchhceeEEEcC
Confidence 35699999999999999999987544 4568999887643 344567788888888855 489999998875
Q ss_pred cCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
...|+||||+. ++|.+++..... .+++..+..++.||+.||.|||+.+++|+||||+|||++. .+.++|+|
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~d 150 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSS--PDCVKLGD 150 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEec--CCCeEEcc
Confidence 56789999998 468777754321 2788999999999999999999999999999999999984 67799999
Q ss_pred CCCccccCCCc----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1022 LGSSCFETDHL----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1022 FGLA~~~~~~~----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
||++....... ....++..|+|||.+....++.++|+|||||++|+|++ |..||...+..+.+..+....
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~----- 225 (270)
T cd05056 151 FGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE----- 225 (270)
T ss_pred CceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-----
Confidence 99987543321 12233467999999988899999999999999999996 999998877655544431000
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.. ......+..+.+||.+||.++|.+|||+.+++..
T Consensus 226 -------------------------------~~-------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 226 -------------------------------RL-------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred -------------------------------cC-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 00 0112346789999999999999999999998863
No 333
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.5e-32 Score=285.87 Aligned_cols=240 Identities=23% Similarity=0.310 Sum_probs=192.8
Q ss_pred EEeccCCceEEEEEEECC-CCc--EEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLH-TGM--DVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~-TGr--~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLV 949 (1182)
+.||.|+||.||+|.+.. .++ .||||.+..... ....+..|+.+++.+.| +||+++++++.. ..+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~-~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDH------ENLIRLYGVVLT-HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCC------CCccceeEEEcC-CeEEEE
Confidence 368999999999999765 333 699999987543 45567788888888865 489999999988 899999
Q ss_pred EEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+. ++|.+++..... ..+++..++.++.||+.||.|||+.+++|+||+|+|||++. ++.+||+|||++...
T Consensus 74 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~--~~~~kl~dfg~~~~~ 147 (257)
T cd05040 74 TELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS--DDKVKIGDFGLMRAL 147 (257)
T ss_pred EEecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEec--CCEEEeccccccccc
Confidence 99997 578777765431 23789999999999999999999999999999999999995 578999999998765
Q ss_pred CCC------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1029 TDH------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1029 ~~~------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
... .....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+.+..+......
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------- 219 (257)
T cd05040 148 PQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGER-------- 219 (257)
T ss_pred cccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCc--------
Confidence 331 112346778999999999999999999999999999998 99999877776665555210000
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||+.+|.+||++.++++
T Consensus 220 -------------------------~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 220 -------------------------L---------ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -------------------------C---------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0 001123578999999999999999999999986
No 334
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=7.2e-33 Score=289.99 Aligned_cols=245 Identities=21% Similarity=0.321 Sum_probs=191.1
Q ss_pred EeccCCceEEEEEEECCCC------cEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 876 YLGSAAFSKAIQAHDLHTG------MDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TG------r~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.||.|+||.||+++.+... +.+|+|.+.... .....+.+|+.+++.+.| |||++++++|......|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~ 75 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH------PNIVKLLGVCLLNEPQY 75 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC------CCeeeEeeeecCCCCeE
Confidence 6899999999999976544 789999886543 334567788888887754 48999999999999999
Q ss_pred EEEEecc-cChHHHHhhhcccC-CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC---CceEEEecC
Q 001034 948 IVCELLK-ANLYEFHKFNRESG-GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS---RCEVKVIDL 1022 (1182)
Q Consensus 948 LVmEyL~-GsLld~Lk~~~~sg-gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~---dG~IKLiDF 1022 (1182)
+||||+. ++|.+++....... ....+++..+..++.||+.||.|||+.+++|+||||+|||++... ...++|+||
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999998 47777776432211 223478889999999999999999999999999999999998532 127999999
Q ss_pred CCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcch
Q 001034 1023 GSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQ 1096 (1182)
Q Consensus 1023 GLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pe 1096 (1182)
|++...... .....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+.+..+... .
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~---- 230 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAG-G---- 230 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcC-C----
Confidence 998643322 122344678999999999999999999999999999998 99999877665554443100 0
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
........+..+.+||.+||..+|.+||++.++++
T Consensus 231 --------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 --------------------------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred --------------------------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 00011234678999999999999999999999876
No 335
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-34 Score=333.06 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=202.5
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEecc-chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecc
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNN-KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLK 954 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~-k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~ 954 (1182)
+||+|.||+||-|+|+.+...+|||-+... ....+-...|+.+.++|+|. |||++++.+....++-|.||-++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHk------NIVrYLGs~senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHK------NIVRYLGSVSENGFFKIFMEQVP 655 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhH------hHHHHhhccCCCCeEEEEeecCC
Confidence 689999999999999999999999999754 34556677888888888877 89999999999999999999999
Q ss_pred cC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC---
Q 001034 955 AN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD--- 1030 (1182)
Q Consensus 955 Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~--- 1030 (1182)
|+ |-.+++.... .+.-.+..+.+|.+||+.||.|||++.|||||||-+||||+. -.|.+||+|||-++.+..
T Consensus 656 GGSLSsLLrskWG---PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT-ySGvlKISDFGTsKRLAginP 731 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWG---PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT-YSGVLKISDFGTSKRLAGINP 731 (1226)
T ss_pred CCcHHHHHHhccC---CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee-ccceEEecccccchhhccCCc
Confidence 75 5555554432 233478899999999999999999999999999999999996 468899999999876432
Q ss_pred CcccccCCCcccchhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhcCCcchhhhhcccccch
Q 001034 1031 HLCSYVQSRSYRAPEVILGL--SYDKKIDIWSLGCILAELCTGNVLFQN-DSPATLLARVIGIIGPIEQGMLAKGRDTYK 1107 (1182)
Q Consensus 1031 ~~ss~vGTp~YmAPEVLlg~--~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~elLakIv~ilGp~PeemL~~~k~s~k 1107 (1182)
-+.++.||..|||||++-.+ +|+.++|||||||++.||.||++||.- .++...+.++ +.+.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV-GmyK--------------- 795 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV-GMYK--------------- 795 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-ccee---------------
Confidence 34577899999999999765 599999999999999999999999964 3333333332 0000
Q ss_pred hhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1108 YFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1108 ~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.+-.+| ...+.+++.||.+|+.+||.+||+|.+||+.||+++.
T Consensus 796 -----------------vHP~iP---------eelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 796 -----------------VHPPIP---------EELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred -----------------cCCCCc---------HHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 001111 1236789999999999999999999999999999876
No 336
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.6e-32 Score=284.57 Aligned_cols=237 Identities=21% Similarity=0.314 Sum_probs=189.9
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
+||.|+||.||+|.+.. ++.||+|++..... ....+..|+.+++.+.| ++|+++++++....+.|+||||+
T Consensus 2 ~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~------~~i~~~~~~~~~~~~~~~v~e~~ 74 (251)
T cd05041 2 KIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH------PNIVKLIGVCVQKQPIYIVMELV 74 (251)
T ss_pred ccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCeEEEEEEEecCCCeEEEEEcC
Confidence 68999999999999877 99999999876432 34567788888888754 48999999999999999999999
Q ss_pred cc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCCc
Q 001034 954 KA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHL 1032 (1182)
Q Consensus 954 ~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ 1032 (1182)
.+ +|.+++..... .++...+..++.+++.||.|||+++++||||+|+|||++. ++.++|+|||++.......
T Consensus 75 ~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~--~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 75 PGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSREEEGGI 147 (251)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcC--CCcEEEeeccccccccCCc
Confidence 75 57666654321 3788889999999999999999999999999999999984 6789999999987544221
Q ss_pred c-----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccc
Q 001034 1033 C-----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTY 1106 (1182)
Q Consensus 1033 s-----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~ 1106 (1182)
. ....+..|+|||.+.+..++.++|+|||||++|+|++ |..||...........+.....
T Consensus 148 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~-------------- 213 (251)
T cd05041 148 YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYR-------------- 213 (251)
T ss_pred ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCC--------------
Confidence 1 1223566999999998899999999999999999999 8999987765544443311000
Q ss_pred hhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1107 KYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1107 k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ......+..+.+||.+||+.+|.+|||+.++|+
T Consensus 214 ----------------------~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 214 ----------------------M-------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred ----------------------C-------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 0 001123678999999999999999999999986
No 337
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.8e-33 Score=291.99 Aligned_cols=243 Identities=27% Similarity=0.395 Sum_probs=192.1
Q ss_pred EEEEEeccCCceEEEEEEEC----CCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 872 HVTEYLGSAAFSKAIQAHDL----HTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 872 eIlk~LGkGaFGeVyLAkDk----~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.+.+.||.|+||.||+|... ..+..|+||+++.. ......+.+|+++++.++|+ ||+++++++.....
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~------ni~~~~g~~~~~~~ 75 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHP------NIVKLYGFCIENEP 75 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBT------TBE-EEEEEESSSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccc------cccccccccccccc
Confidence 56789999999999999876 45678999999653 23467888999999988655 89999999998888
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+++||||+. |+|.+++..... ..+++..+..|+.||+.||.|||+.+++|++|++.|||++. ++.+||+|||+
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~--~~~~Kl~~f~~ 149 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKNK----EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDS--NGQVKLSDFGL 149 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTCT----TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEET--TTEEEEESTTT
T ss_pred cccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccccccc--ccccccccccc
Confidence 999999998 678888876511 23889999999999999999999999999999999999994 77899999999
Q ss_pred ccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1025 SCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
+...... .........|+|||++....++.++||||||+++|||++ |+.||...+......++....-
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~------ 223 (259)
T PF07714_consen 150 SRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR------ 223 (259)
T ss_dssp GEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------
Confidence 8765221 123345778999999999889999999999999999999 7899988877776655521000
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.......+..+.+||..||..+|.+|||+.+|++
T Consensus 224 -------------------------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 224 -------------------------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp -------------------------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred -------------------------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0011234678999999999999999999999985
No 338
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=6.5e-33 Score=306.02 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=193.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEE-----CCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHD-----LHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkD-----k~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++.+.||.|+||.||+|.+ ..+++.||||+++... .....+..|+.++..+.+ |+||+++++++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~-----h~niv~~~~~~ 80 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-----HLNVVNLLGAC 80 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccC-----CccHhhhccee
Confidence 46899999999999999999984 3568899999997542 334567789999988854 45999999987
Q ss_pred Eec-CeEEEEEEeccc-ChHHHHhhhcccC--------------------------------------------------
Q 001034 941 YYR-EHLLIVCELLKA-NLYEFHKFNRESG-------------------------------------------------- 968 (1182)
Q Consensus 941 qd~-e~LyLVmEyL~G-sLld~Lk~~~~sg-------------------------------------------------- 968 (1182)
... ..+++||||+.+ +|.+++.......
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 81 TKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 654 568999999985 6777765432100
Q ss_pred -----------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC-----c
Q 001034 969 -----------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-----L 1032 (1182)
Q Consensus 969 -----------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~-----~ 1032 (1182)
....+++..+..++.||+.||.|||+++|+||||||.|||++. ++.+||+|||++...... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~ 238 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE--NNVVKICDFGLARDIYKDPDYVRK 238 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC--CCcEEEEecccccccccCcchhhc
Confidence 0013677888999999999999999999999999999999984 678999999998754221 1
Q ss_pred ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcc
Q 001034 1033 CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTK 1111 (1182)
Q Consensus 1033 ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k 1111 (1182)
....+++.|+|||++.+..++.++|||||||++|+|++ |..||........+...+. ..
T Consensus 239 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----------~~--------- 298 (343)
T cd05103 239 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-----------EG--------- 298 (343)
T ss_pred CCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHh-----------cc---------
Confidence 12334677999999999999999999999999999997 9999976433221111110 00
Q ss_pred cchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1112 NHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1112 ~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
..... ....++.+.++|.+||+.||.+|||+.+|++|
T Consensus 299 -------------~~~~~---------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 299 -------------TRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred -------------CCCCC---------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00000 11245789999999999999999999999986
No 339
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.4e-32 Score=283.06 Aligned_cols=238 Identities=21% Similarity=0.289 Sum_probs=188.6
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
+||.|+||.||++.. .++..+|+|+++... .....+.+|+.+++.+. |+||+++++++......++||||+
T Consensus 2 ~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~~ 74 (250)
T cd05085 2 LLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYD------HPNIVKLIGVCTQRQPIYIVMELV 74 (250)
T ss_pred ccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCC------CCCcCeEEEEEecCCccEEEEECC
Confidence 689999999999985 468899999987543 22345777888888775 458999999999999999999999
Q ss_pred cc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCCc
Q 001034 954 KA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHL 1032 (1182)
Q Consensus 954 ~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ 1032 (1182)
.+ +|..++.... ..+.+..+..++.||+.||.|||+.|++||||||+||+++. ++.+||+|||++.......
T Consensus 75 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~--~~~~~l~d~g~~~~~~~~~ 147 (250)
T cd05085 75 PGGDFLSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGE--NNVLKISDFGMSRQEDDGI 147 (250)
T ss_pred CCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcC--CCeEEECCCccceeccccc
Confidence 85 5666654322 12788899999999999999999999999999999999984 6789999999986543322
Q ss_pred c----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccch
Q 001034 1033 C----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYK 1107 (1182)
Q Consensus 1033 s----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k 1107 (1182)
. ...++..|+|||++.+..++.++|||||||++|+|++ |..||...........+....
T Consensus 148 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~---------------- 211 (250)
T cd05085 148 YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGY---------------- 211 (250)
T ss_pred cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC----------------
Confidence 1 2233567999999998889999999999999999998 999998766555444331000
Q ss_pred hhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1108 YFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1108 ~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. .......+..+.+||.+||..+|.+||++.++++.
T Consensus 212 ------------------~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 212 ------------------R---------MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred ------------------C---------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 0 00012346789999999999999999999999863
No 340
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-34 Score=306.65 Aligned_cols=253 Identities=26% Similarity=0.375 Sum_probs=205.7
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
..+++..||.|+.|.||++..+.+|..+|||.+++.. .....++..+.++.... +.|+||++|++|..+..++
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~-----dcpyIV~c~GyFi~n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSH-----DCPYIVQCFGYFITNTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhcc-----CCCeeeeeeeEEeeCchHH
Confidence 4566778999999999999999999999999998753 33345555555544433 3579999999999999999
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|.||.|...+-.++++.+.+ +++..+-.+...++.||.||.. ++|||||+||+|||+| ..|.|||||||++-
T Consensus 168 IcMelMs~C~ekLlkrik~p-----iPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD--e~GniKlCDFGIsG 240 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIKGP-----IPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD--ERGNIKLCDFGISG 240 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCC-----chHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc--cCCCEEeecccccc
Confidence 99999987766666655433 8899999999999999999985 6899999999999999 58899999999997
Q ss_pred ccCC--CcccccCCCcccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhcCCcchhhhh
Q 001034 1027 FETD--HLCSYVQSRSYRAPEVILG---LSYDKKIDIWSLGCILAELCTGNVLFQN-DSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1027 ~~~~--~~ss~vGTp~YmAPEVLlg---~~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
+..+ ......|.+.|||||.+.- ..|+.++||||||+.++||.||..||.+ ....+++.+|+....|
T Consensus 241 rlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP------- 313 (391)
T KOG0983|consen 241 RLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPP------- 313 (391)
T ss_pred eeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCC-------
Confidence 6543 3445689999999999964 4699999999999999999999999987 4566777776531111
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
.+. .....++.|.+|+..||+.|+.+||...+||+|||+.+
T Consensus 314 ---------------------------------~L~-~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 314 ---------------------------------LLP-GHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKR 354 (391)
T ss_pred ---------------------------------CCC-cccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceee
Confidence 011 11126899999999999999999999999999999865
No 341
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=328.15 Aligned_cols=254 Identities=28% Similarity=0.473 Sum_probs=213.3
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
-.+.|.|++.||+|.|++|.++.+..++..||||++.+.. .......+|+++++.++|+ |||+++.+....
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HP------nIvkl~~v~~t~ 127 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHP------NIVKLFSVIETE 127 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCc------ceeeeeeeeeec
Confidence 3467999999999999999999999999999999998753 3345578899999988765 899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+|+||||..+ .+++++..... +.+..++.++.|++.|++|||+++|||||||++||||+. +..|||+||
T Consensus 128 ~~lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~--~mnikIaDf 199 (596)
T KOG0586|consen 128 ATLYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDE--NMNIKIADF 199 (596)
T ss_pred ceeEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccc--ccceeeecc
Confidence 999999999985 68888776543 566889999999999999999999999999999999994 667999999
Q ss_pred CCccccCC--CcccccCCCcccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1023 GSSCFETD--HLCSYVQSRSYRAPEVILGLSYD-KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1023 GLA~~~~~--~~ss~vGTp~YmAPEVLlg~~yS-~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
|++.+... ...++||++.|+|||++.+..|. ..+|+||||++||.|++|.+||.+.+..++-.+.+.
T Consensus 200 gfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~---------- 269 (596)
T KOG0586|consen 200 GFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR---------- 269 (596)
T ss_pred ccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee----------
Confidence 99987543 45678999999999999998875 789999999999999999999988764433222210
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPYE 1178 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~e 1178 (1182)
-.+.+| --++.++.+||++||..+|.+|++..++++|.|....++
T Consensus 270 -------------------------gk~rIp---------~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~ 314 (596)
T KOG0586|consen 270 -------------------------GKYRIP---------FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLE 314 (596)
T ss_pred -------------------------eeeccc---------ceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhh
Confidence 011111 123678999999999999999999999999999876543
No 342
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.1e-32 Score=288.50 Aligned_cols=245 Identities=20% Similarity=0.292 Sum_probs=195.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCc----EEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGM----DVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr----~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
..+|++.+.||.|+||.||+|..+.++. .+|+|.+.... .....+.+|+.+++.+.| +||+++++++.
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~ 79 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDH------PHVVRLLGICL 79 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEe
Confidence 4689999999999999999999877665 58999887653 234567778888888754 48999999988
Q ss_pred ecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
. ...++||||+. |+|.+++..... .+++..+..++.||+.||.|||+.+|+||||||+|||++. ++.+||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~--~~~~kL~ 151 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKT--PQHVKIT 151 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcC--CCeEEEC
Confidence 7 78999999998 467777654322 2889999999999999999999999999999999999984 6779999
Q ss_pred cCCCccccCCCcc-----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDHLC-----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~~s-----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||++........ ...++..|+|||.+....++.++|+|||||++|+|++ |..||......++...+.... .
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~- 229 (279)
T cd05057 152 DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-R- 229 (279)
T ss_pred CCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-C-
Confidence 9999876443221 1123567999999988899999999999999999998 999998877665544442100 0
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.......+..+.++|.+||..+|..||++.++++
T Consensus 230 -----------------------------------------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 230 -----------------------------------------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred -----------------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0011234578899999999999999999999876
No 343
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=329.94 Aligned_cols=250 Identities=24% Similarity=0.378 Sum_probs=213.8
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
|.-++.||.|+||-||.|++..+.+.||||.+.-. ......++.|+++|+.+.|+ |+|.+.+.|.-....
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HP------ntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHP------NTIEYKGCYLREHTA 101 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCC------CcccccceeeccchH
Confidence 55566899999999999999999999999998632 34457889999999999766 899999999988899
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+||||||-|+..+++...+++ +.+..+..|+.+.+.||.|||+.+.||||||..|||+. ..|.|||.|||.+.
T Consensus 102 WLVMEYClGSAsDlleVhkKp-----lqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs--e~g~VKLaDFGSAs 174 (948)
T KOG0577|consen 102 WLVMEYCLGSASDLLEVHKKP-----LQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS--EPGLVKLADFGSAS 174 (948)
T ss_pred HHHHHHHhccHHHHHHHHhcc-----chHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec--CCCeeeeccccchh
Confidence 999999999888888776653 88999999999999999999999999999999999999 58999999999987
Q ss_pred ccCCCcccccCCCcccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1027 FETDHLCSYVQSRSYRAPEVILG---LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1027 ~~~~~~ss~vGTp~YmAPEVLlg---~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
.. .+.++++|||+|||||+++. +.|+-++||||||+++.||.-.+||+.+.+....+--|.+--.
T Consensus 175 i~-~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNes----------- 242 (948)
T KOG0577|consen 175 IM-APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----------- 242 (948)
T ss_pred hc-CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCC-----------
Confidence 54 45678999999999999975 5799999999999999999999999988887766666531110
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
|.. ..+.-+..|+.|+..||++-|..|||++++|+|+|....
T Consensus 243 --------------------------PtL-----qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 243 --------------------------PTL-----QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred --------------------------CCC-----CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 110 012236789999999999999999999999999998754
No 344
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.5e-32 Score=289.33 Aligned_cols=261 Identities=22% Similarity=0.276 Sum_probs=191.3
Q ss_pred CCEEEEEEeccCCceEEEEEE----ECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 869 GRYHVTEYLGSAAFSKAIQAH----DLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAk----Dk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.+|++++.||.|+||.||++. +..+++.||+|.+.... .....+..|+.+++.+.| |||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h------~~iv~~~~~~~~~ 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQH------DNIVKYKGVCYSA 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCC------CCeeEEEEEEccC
Confidence 478999999999999999997 45678999999987543 334567788999888754 4899999987543
Q ss_pred --CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 --EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 --e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
..+++||||+. ++|.+++..... .+++..+..++.||+.||.|||+.||+||||||+|||++. ++.+||+
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~--~~~~~l~ 150 (284)
T cd05081 78 GRRNLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVES--ENRVKIG 150 (284)
T ss_pred CCCceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECC--CCeEEEC
Confidence 56899999997 578777754321 2788899999999999999999999999999999999984 6789999
Q ss_pred cCCCccccCCCcc------cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDHLC------SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~~s------s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||++........ ...++..|+|||++.+..++.++|||||||++|+|++|..|+..... .....+ +..
T Consensus 151 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-~~~~~~----~~~ 225 (284)
T cd05081 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA-EFMRMM----GND 225 (284)
T ss_pred CCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch-hhhhhc----ccc
Confidence 9999876433211 11234469999999988999999999999999999999887754331 111111 110
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
... ..... ... ..+.. ..........+..+.+||.+||..+|++|||+.+|++
T Consensus 226 ~~~-----~~~~~------~~~------~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 226 KQG-----QMIVY------HLI------ELLKN-----NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred ccc-----ccchH------HHH------HHHhc-----CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 000 00000 000 00000 0000112345688999999999999999999999986
No 345
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=3.2e-32 Score=287.96 Aligned_cols=251 Identities=20% Similarity=0.258 Sum_probs=196.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECC----CCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLH----TGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~----TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.++|++.+.||+|+||.||+|.+.. ++..|++|++... ......+..|+.+++.+.| +||+++++++.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h------~ni~~~~~~~~ 78 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSH------QNILPILHVCI 78 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCC------CCCCeEEEEEe
Confidence 4689999999999999999999876 3688999998754 2334567778888887754 48999999876
Q ss_pred e-cCeEEEEEEecc-cChHHHHhhhcccC--CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 942 Y-REHLLIVCELLK-ANLYEFHKFNRESG--GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 942 d-~e~LyLVmEyL~-GsLld~Lk~~~~sg--gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
. ....+++++|+. ++|..++....... ....+++..+..++.||+.||.|||+.+++||||||+|||++. ++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~--~~~~ 156 (280)
T cd05043 79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDE--ELQV 156 (280)
T ss_pred cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcC--CCcE
Confidence 5 477899999998 57777765542211 1134889999999999999999999999999999999999984 6789
Q ss_pred EEecCCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc
Q 001034 1018 KVIDLGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~il 1091 (1182)
||+|||+++...... ....++..|+|||++.+..++.++|||||||++|+|++ |++||...++.+....+....
T Consensus 157 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 236 (280)
T cd05043 157 KITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY 236 (280)
T ss_pred EECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC
Confidence 999999987532211 12345667999999999899999999999999999999 999998877655444332100
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.. .....++..+.++|.+||..||++|||+.++++
T Consensus 237 ------------------------------------~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 237 ------------------------------------RL-------AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred ------------------------------------CC-------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 00 001124578999999999999999999999986
No 346
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.8e-32 Score=312.67 Aligned_cols=253 Identities=23% Similarity=0.289 Sum_probs=195.0
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHT-----GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~T-----Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|++++.||.|+||.||+|.+... +..||||+++... .....+.+|+.+++.+. .||||++++++|
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-----~HpnIv~l~~~~ 110 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-----PHLNIVNLLGAC 110 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-----CCCCeeeEEEEE
Confidence 46789999999999999999986433 3569999997542 33456788999998885 255999999999
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhccc----------------------------------------------------
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRES---------------------------------------------------- 967 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~s---------------------------------------------------- 967 (1182)
.....+||||||+. |+|.+++..+...
T Consensus 111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (400)
T cd05105 111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP 190 (400)
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence 99999999999998 4677776543210
Q ss_pred --------------------------------------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEE
Q 001034 968 --------------------------------------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILV 1009 (1182)
Q Consensus 968 --------------------------------------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILI 1009 (1182)
.....+++..+..++.||+.||.|||+.+|+||||||+|||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill 270 (400)
T cd05105 191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence 001136778889999999999999999999999999999999
Q ss_pred ccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 001034 1010 KSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATL 1083 (1182)
Q Consensus 1010 Ds~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~el 1083 (1182)
+. ++.+||+|||++...... .....+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus 271 ~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~ 348 (400)
T cd05105 271 AQ--GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST 348 (400)
T ss_pred eC--CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH
Confidence 84 677999999998754321 123456778999999999999999999999999999997 9999976443322
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS 1163 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT 1163 (1182)
+...+... . .. ......+..+.+||.+||+.||.+|||
T Consensus 349 ~~~~~~~~---------------------------------~--~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt 386 (400)
T cd05105 349 FYNKIKSG---------------------------------Y--RM-------AKPDHATQEVYDIMVKCWNSEPEKRPS 386 (400)
T ss_pred HHHHHhcC---------------------------------C--CC-------CCCccCCHHHHHHHHHHCccCHhHCcC
Confidence 22211000 0 00 011234678999999999999999999
Q ss_pred HHHHHc
Q 001034 1164 ASDALK 1169 (1182)
Q Consensus 1164 AeELLq 1169 (1182)
+.+|.+
T Consensus 387 ~~~l~~ 392 (400)
T cd05105 387 FLHLSD 392 (400)
T ss_pred HHHHHH
Confidence 999876
No 347
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.8e-32 Score=286.18 Aligned_cols=250 Identities=26% Similarity=0.413 Sum_probs=195.7
Q ss_pred CEEEEEEeccCCceEEEEEEECC-CCcEEEEEEEeccc-----------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLH-TGMDVCVKIIKNNK-----------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~-TGr~VAVKIIkk~k-----------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
.|++.+.||.|+||.||++.+.. +++.+|+|.+.... ........|+.++... ..|+||++++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~h~~i~~~~ 75 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ-----LRHPNIVRYY 75 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhc-----CCCCCeeeEE
Confidence 37888999999999999999887 78899999886321 1223445566655542 2456999999
Q ss_pred EEEEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCc
Q 001034 938 DYFYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRC 1015 (1182)
Q Consensus 938 dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG 1015 (1182)
++|....++|+||||+.+ +|.+++....... ..+++..++.++.||+.||.|||+ .+++|+||+|.|||++. ++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~--~~ 151 (269)
T cd08528 76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKK--QRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGE--DD 151 (269)
T ss_pred eeEccCCeEEEEEecCCCCcHHHHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECC--CC
Confidence 999999999999999985 6767664432221 238888999999999999999996 78999999999999984 67
Q ss_pred eEEEecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1016 EVKVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1016 ~IKLiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
.++|+|||.+...... .....++..|+|||++.+..++.++|+||||+++|+|++|++||...........+......
T Consensus 152 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 231 (269)
T cd08528 152 KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE 231 (269)
T ss_pred cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC
Confidence 8999999998754433 23456788999999999888999999999999999999999999877665544444210000
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
| . .....+..+.+||.+||+.||.+||++.|+..+
T Consensus 232 ------------------------------------~----~--~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 232 ------------------------------------P----L--PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ------------------------------------c----C--CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0 0 011346789999999999999999999999764
No 348
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.9e-32 Score=286.65 Aligned_cols=246 Identities=22% Similarity=0.255 Sum_probs=183.4
Q ss_pred EeccCCceEEEEEEEC--CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDL--HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk--~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||+|+||.||+|... .....+|+|.+.... .....+.+|+.+++.+. |+||+++++.|.....+|+|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~------h~nii~~~~~~~~~~~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELN------HPNVLQCLGQCIESIPYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCC------CCCcceEEEEECCCCceEEEEE
Confidence 5899999999999643 245578888876432 22345667888877765 4599999999999999999999
Q ss_pred eccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 952 LLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|+.+ +|.+++...... ....+.+..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~--~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTA--DLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecC--CCcEEEecccccccccc
Confidence 9985 677777654321 1122567778899999999999999999999999999999994 67899999999864321
Q ss_pred C-----cccccCCCcccchhhhc-------CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1031 H-----LCSYVQSRSYRAPEVIL-------GLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1031 ~-----~ss~vGTp~YmAPEVLl-------g~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
. .....+++.|+|||++. ...++.++|||||||++|+|++ |.+||....+.+.+..++.....
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---- 228 (269)
T cd05042 153 EDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI---- 228 (269)
T ss_pred chheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc----
Confidence 1 12234567799999974 3457889999999999999999 88999877766655554311110
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
..+. .......+..+.+++..|+ .||.+|||+.+|++
T Consensus 229 ------------------------------~~~~----~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 229 ------------------------------KLPK----PQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ------------------------------cCCC----CcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 0000 0112235678889999888 59999999999986
No 349
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.2e-32 Score=292.91 Aligned_cols=260 Identities=22% Similarity=0.276 Sum_probs=192.9
Q ss_pred CEEEEEEeccCCceEEEEEEE----CCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 870 RYHVTEYLGSAAFSKAIQAHD----LHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkD----k~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
-|++++.||+|+||.||+|.. ..++..||+|.++.. ......+.+|+.+++.+.| +||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~ 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH------ENIVKYKGICTED 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCC------CCeeeeeeEEecC
Confidence 378899999999999999974 467899999998754 2334567788899888755 4899999998875
Q ss_pred --CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 --EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 --e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
..+++||||++| +|.+++..... .+++..+..++.||+.||.|||+.|++||||||+|||++. ++.++|+
T Consensus 79 ~~~~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~--~~~~~l~ 151 (284)
T cd05079 79 GGNGIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES--EHQVKIG 151 (284)
T ss_pred CCCceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcC--CCCEEEC
Confidence 678999999975 67766643321 2788899999999999999999999999999999999984 6779999
Q ss_pred cCCCccccCCCc------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDHL------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~~------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||++....... ....++..|+|||++.+..++.++|||||||++|+|++++.|+.... . .+....++.
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~--~---~~~~~~~~~ 226 (284)
T cd05079 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPM--T---LFLKMIGPT 226 (284)
T ss_pred CCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCcccc--c---hhhhhcccc
Confidence 999987543321 23455678999999998899999999999999999999887764421 1 111222222
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
....... .. ...+... . .......++..+.+||.+||+.+|.+|||+.+++++
T Consensus 227 ~~~~~~~------------~~------~~~~~~~--~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 227 HGQMTVT------------RL------VRVLEEG--K---RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred cccccHH------------HH------HHHHHcC--c---cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 1110000 00 0000000 0 001123467899999999999999999999999874
No 350
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.4e-32 Score=286.51 Aligned_cols=237 Identities=18% Similarity=0.251 Sum_probs=186.1
Q ss_pred EeccCCceEEEEEEEC--CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDL--HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk--~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||.|+||.||+|... ..+..||+|++.... .....+.+|+.+++.+.| +||+++++++. ...+++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h------~~ii~~~~~~~-~~~~~lv~e 74 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDN------PYIVRMIGVCE-AEALMLVME 74 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCC------CCeEEEEEEEc-CCCeEEEEE
Confidence 4899999999999764 456679999997653 233557788899988855 48999999875 457899999
Q ss_pred eccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 952 LLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|+++ +|.+++..... .+++..++.++.||+.||.|||++|++||||||+|||++. ++.+||+|||++.....
T Consensus 75 ~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~--~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 75 MASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVN--QHYAKISDFGLSKALGA 147 (257)
T ss_pred eCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcC--CCcEEeccCCccccccC
Confidence 9985 56666653321 3889999999999999999999999999999999999984 67899999999875432
Q ss_pred Cc------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhccc
Q 001034 1031 HL------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGR 1103 (1182)
Q Consensus 1031 ~~------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k 1103 (1182)
.. ....+++.|+|||++.+..++.++|||||||++|+|++ |..||......+....+.....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------- 216 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR----------- 216 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-----------
Confidence 21 11123568999999998889999999999999999996 9999988776655444321000
Q ss_pred ccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1104 DTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1104 ~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.......+.++.+||.+||.++|++||++.++++
T Consensus 217 --------------------------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 217 --------------------------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred --------------------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0011234689999999999999999999999876
No 351
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-35 Score=312.30 Aligned_cols=288 Identities=24% Similarity=0.428 Sum_probs=226.7
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEec---cchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe--
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN---NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY-- 942 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk---~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd-- 942 (1182)
.+.|+-+.+||+|.||+||+|+.+.+++.||+|++-- ...+-...++|+++|..+.|. |++.++.++..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHe------nv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHE------NVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcch------hHHHHHHHHhhcc
Confidence 4567788899999999999999999999999987532 234456678999999999877 56666554432
Q ss_pred ------cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCce
Q 001034 943 ------REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCE 1016 (1182)
Q Consensus 943 ------~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~ 1016 (1182)
...+|+||.+|..+|.-++.... ..|+..++..++.+++.||.|||...|+|||+||.|+||+ ++|.
T Consensus 90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt--~dgi 162 (376)
T KOG0669|consen 90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT--KDGI 162 (376)
T ss_pred CCcccccceeeeeHHHhhhhHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc--CCce
Confidence 24599999999988877765432 2399999999999999999999999999999999999999 5899
Q ss_pred EEEecCCCccccCCC-------cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 001034 1017 VKVIDLGSSCFETDH-------LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVI 1088 (1182)
Q Consensus 1017 IKLiDFGLA~~~~~~-------~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv 1088 (1182)
+||+|||+++..... ....+-|.+|++||.++|. .|+++.|||..||||.+|+++.+.|.+++....+..|.
T Consensus 163 lklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 163 LKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred EEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 999999999643221 2334569999999999986 59999999999999999999999999999999999999
Q ss_pred hhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccccc--ccccC--CCCCcHHHHHHHHHhcccCCCCCCCH
Q 001034 1089 GIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKT--SLRHR--LPMGDQGFIDFVAHLLEINPKKRPSA 1164 (1182)
Q Consensus 1089 ~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~--sL~~~--l~~~SeeL~DLIrkMLq~DPekRPTA 1164 (1182)
.++|.+..++|.......-+ ... + ....|+.. .+..+ .-.-++++.+||.+||.+||.+|+++
T Consensus 243 ~LcGs~tkevWP~~d~lpL~--------~si-e----~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~a 309 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLY--------QSI-E----LEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDA 309 (376)
T ss_pred HHhccCCcccCCCcccchHH--------Hhc-c----CCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcch
Confidence 99999888777654332111 000 0 00011110 00011 11226789999999999999999999
Q ss_pred HHHHcCCCCCCCCCCCC
Q 001034 1165 SDALKHPWLSHPYEPIS 1181 (1182)
Q Consensus 1165 eELLqHPWFk~~~eP~~ 1181 (1182)
.++|.|.||...+.|++
T Consensus 310 d~alnh~~F~kdp~pqa 326 (376)
T KOG0669|consen 310 DQALNHDFFWKDPMPQA 326 (376)
T ss_pred HhhhchhhhhcCCcchh
Confidence 99999999999988864
No 352
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=6.8e-33 Score=290.87 Aligned_cols=238 Identities=19% Similarity=0.251 Sum_probs=182.4
Q ss_pred EeccCCceEEEEEEECCCCc-------EEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 876 YLGSAAFSKAIQAHDLHTGM-------DVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr-------~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.||.|+||.||+|.+...+. .+|+|.+.... ...+.+..|+.+++.+. ||||+++++++......+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~------h~~iv~~~~~~~~~~~~~ 75 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLS------HKHLVLNYGVCVCGDESI 75 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCC------CCChhheeeEEEeCCCcE
Confidence 68999999999999865544 38888886543 33455667778877765 459999999999999999
Q ss_pred EEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC------ceEEEe
Q 001034 948 IVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR------CEVKVI 1020 (1182)
Q Consensus 948 LVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d------G~IKLi 1020 (1182)
+||||+.+ +|..++..... .+++..+..++.||+.||.|||++||+||||||+|||++..+. +.++|+
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~ 150 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS 150 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence 99999986 56666654332 3788889999999999999999999999999999999985322 237999
Q ss_pred cCCCccccCCCcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1021 DLGSSCFETDHLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGN-VLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1021 DFGLA~~~~~~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr-~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
|||++..... .....+++.|+|||++.+. .++.++|||||||++|+|++|. +||...++........ ..
T Consensus 151 d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~-~~------- 221 (258)
T cd05078 151 DPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYE-DR------- 221 (258)
T ss_pred ccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHH-cc-------
Confidence 9999865432 2335678899999999874 5899999999999999999984 6766544433221110 00
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.. .....+..+.+||.+||+.||.+|||+.++++.
T Consensus 222 ----------------------------~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 222 ----------------------------HQ---------LPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred ----------------------------cc---------CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 00 011234678999999999999999999999874
No 353
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.5e-32 Score=283.16 Aligned_cols=237 Identities=22% Similarity=0.277 Sum_probs=183.3
Q ss_pred EEeccCCceEEEEEEECCCC----------cEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 875 EYLGSAAFSKAIQAHDLHTG----------MDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TG----------r~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
+.||+|+||.||++.+..++ ..+++|++.........+.+|+.+++.+.| +||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH------KHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC------cchhheeeEEec-C
Confidence 36899999999999998776 358888877655435677788888887754 489999999988 7
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC-----ceEE
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR-----CEVK 1018 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d-----G~IK 1018 (1182)
..++||||+.+ +|..++..... .++...+..++.||+.||.|||++||+||||||+|||++.... ..+|
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEE
Confidence 78999999986 56666554331 3788889999999999999999999999999999999985321 1699
Q ss_pred EecCCCccccCCCcccccCCCcccchhhhcCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1019 VIDLGSSCFETDHLCSYVQSRSYRAPEVILGL--SYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1019 LiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~--~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
|+|||++..... .....++..|+|||++.+. .++.++|+|||||++|+|++ |..||...+......... .
T Consensus 149 l~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~----- 221 (259)
T cd05037 149 LSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-D----- 221 (259)
T ss_pred eCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-c-----
Confidence 999999876543 2334567789999999876 78999999999999999999 578886654322111110 0
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
....+ ......+.+||.+||..+|.+|||+.++|+
T Consensus 222 ------------------------------~~~~~---------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 222 ------------------------------QHRLP---------MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred ------------------------------CCCCC---------CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00000 001268899999999999999999999986
No 354
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.8e-32 Score=286.12 Aligned_cols=249 Identities=19% Similarity=0.269 Sum_probs=192.2
Q ss_pred EEEEEEeccCCceEEEEEEEC---CCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 871 YHVTEYLGSAAFSKAIQAHDL---HTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk---~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
|.+.+.||+|+||.||+|... .+++.||||++.... ...+.+.+|+.+++.+.| |||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h------~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH------PNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC------CCcceEEEEEccCC
Confidence 667889999999999999864 367899999997642 334567788888888754 48999999887542
Q ss_pred ------eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 945 ------HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 945 ------~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
..+++++|+.+ +|..++...........++...++.++.||+.||.|||+.+|+||||||+|||++. .+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~--~~~~ 152 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNE--NMTV 152 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcC--CCCE
Confidence 24788999884 56655543322222234788889999999999999999999999999999999984 6779
Q ss_pred EEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc
Q 001034 1018 KVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~il 1091 (1182)
||+|||+++..... .....+++.|++||.+....++.++|||||||++|+|++ |++||...+....+..+....
T Consensus 153 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~ 232 (273)
T cd05074 153 CVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN 232 (273)
T ss_pred EECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC
Confidence 99999998754322 122344678999999999899999999999999999999 899998777655544442100
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. + ...+..+..+.+|+.+||..+|..||++.+++++
T Consensus 233 -~-------------------------------~-----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 233 -R-------------------------------L-----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred -c-------------------------------C-----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0 0012345789999999999999999999999873
No 355
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.1e-32 Score=335.61 Aligned_cols=252 Identities=21% Similarity=0.282 Sum_probs=196.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
++|++.++||+|+||.||+|++..+++.||||+++... .....+.+|+.+++.+.| |||+++++++....
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H------PNIVkl~~v~~d~~ 75 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH------PGIVPVYSICSDGD 75 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC------cCcCeEEEEEeeCC
Confidence 68999999999999999999999999999999997542 234567788998888865 48999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccC-----CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESG-----GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sg-----gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
..|+||||+.| +|.+++....... ....++...+..++.||+.||.|||++||+||||||+|||++. .+.++
T Consensus 76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~--dg~vK 153 (932)
T PRK13184 76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGL--FGEVV 153 (932)
T ss_pred EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcC--CCCEE
Confidence 99999999985 6766665321110 0112556778899999999999999999999999999999984 67799
Q ss_pred EecCCCccccCC---------------------CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001034 1019 VIDLGSSCFETD---------------------HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN 1077 (1182)
Q Consensus 1019 LiDFGLA~~~~~---------------------~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g 1077 (1182)
|+|||++..... .....+||+.|+|||++.+..++.++|||||||++|+|++|.+||..
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~ 233 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRR 233 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCC
Confidence 999999875411 01124689999999999999999999999999999999999999976
Q ss_pred CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccC
Q 001034 1078 DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEIN 1157 (1182)
Q Consensus 1078 ~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~D 1157 (1182)
........... .. .|.. .......+..+.+++.+||..|
T Consensus 234 ~~~~ki~~~~~--i~------------------------------------~P~~---~~p~~~iP~~L~~LI~rcL~~D 272 (932)
T PRK13184 234 KKGRKISYRDV--IL------------------------------------SPIE---VAPYREIPPFLSQIAMKALAVD 272 (932)
T ss_pred cchhhhhhhhh--cc------------------------------------Chhh---ccccccCCHHHHHHHHHHccCC
Confidence 44322211100 00 0000 0011245678999999999999
Q ss_pred CCCCCCHHHHHc
Q 001034 1158 PKKRPSASDALK 1169 (1182)
Q Consensus 1158 PekRPTAeELLq 1169 (1182)
|.+|++..+.|.
T Consensus 273 P~kR~ss~eeLl 284 (932)
T PRK13184 273 PAERYSSVQELK 284 (932)
T ss_pred hhhCcCHHHHHH
Confidence 999988766554
No 356
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.8e-32 Score=287.50 Aligned_cols=239 Identities=18% Similarity=0.275 Sum_probs=179.5
Q ss_pred EeccCCceEEEEEEECC------------CCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 876 YLGSAAFSKAIQAHDLH------------TGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~------------TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
.||+|+||.||++.... ....+|+|++.... .....+..|+.+++.+.| |||+++++++..
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h------p~iv~~~~~~~~ 75 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH------KHIVLLYGVCVR 75 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC------CCEeeEEEEEec
Confidence 68999999999997432 23358889876543 233455667777777754 599999999999
Q ss_pred cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC-----ceE
Q 001034 943 REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR-----CEV 1017 (1182)
Q Consensus 943 ~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d-----G~I 1017 (1182)
....++||||+.++.+..+..... ..+++..+..++.||+.||.|||+.+|+||||||+|||++..+. ..+
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~ 151 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKS----DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFI 151 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCcee
Confidence 999999999999765544433221 13788899999999999999999999999999999999975221 238
Q ss_pred EEecCCCccccCCCcccccCCCcccchhhhc-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1018 KVIDLGSSCFETDHLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELC-TGNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~ss~vGTp~YmAPEVLl-g~~yS~kSDIWSLGVILYELL-TGr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
+|+|||++...... ....++..|+|||++. +..++.++|||||||++|+|+ .|..||......+.. .+.. .
T Consensus 152 ~l~d~g~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~---~-- 224 (262)
T cd05077 152 KLSDPGIPITVLSR-QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE---G-- 224 (262)
T ss_pred EeCCCCCCccccCc-ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh---c--
Confidence 99999998654322 3346788899999987 567899999999999999998 588888765432221 1100 0
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. . ......+.++.+||.+||+.||.+||++.+||++
T Consensus 225 ----------------------------~----~-------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 225 ----------------------------Q----C-------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred ----------------------------C----c-------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0 0 0011124678999999999999999999999975
No 357
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=308.85 Aligned_cols=287 Identities=31% Similarity=0.540 Sum_probs=236.7
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
...||.-++.+|.|+- .|..|.|.-.++.||+|.+... ........+|+.++..++|. ||++++.+|.-.
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~------nii~l~n~ftP~ 87 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHK------NIISLLNVFTPQ 87 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhccc------ceeeeeeccCcc
Confidence 4578999999999999 8899999999999999987643 23345677899998888766 899999999754
Q ss_pred ------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 944 ------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 944 ------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
..+|+|||+|.++|...+... +.-..+..|++|++.|+.|||+.||+||||||+||++.. .+.+
T Consensus 88 ~~l~~~~e~y~v~e~m~~nl~~vi~~e--------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~--~~~l 157 (369)
T KOG0665|consen 88 KTLEEFQEVYLVMELMDANLCQVILME--------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS--DCTL 157 (369)
T ss_pred ccHHHHHhHHHHHHhhhhHHHHHHHHh--------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc--hhhe
Confidence 468999999999999988733 566789999999999999999999999999999999984 8899
Q ss_pred EEecCCCccccCCC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1018 KVIDLGSSCFETDH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
||.|||++...... .+.++.|+.|+|||++.+..|...+||||+|||+.||++|...|.+.+..+.+.+|+..+|.+.
T Consensus 158 Ki~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 158 KILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPD 237 (369)
T ss_pred eeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCC
Confidence 99999999765443 5677899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhcccccccc--ccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSL--RHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL--~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
..++.+...+..-|..+.. +... ..+....|...-. ....+.....+++|+.+||..||++|.++++||+||||
T Consensus 238 ~~F~~qL~~~~r~yv~~~~---~y~~-~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~ 313 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRP---QYQA-ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI 313 (369)
T ss_pred HHHHHHhhHHHHHHhhcCh---Hhhc-cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence 8888877666554443221 1111 2333334433211 11113445789999999999999999999999999999
Q ss_pred C
Q 001034 1174 S 1174 (1182)
Q Consensus 1174 k 1174 (1182)
+
T Consensus 314 ~ 314 (369)
T KOG0665|consen 314 K 314 (369)
T ss_pred e
Confidence 7
No 358
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.8e-32 Score=282.12 Aligned_cols=239 Identities=19% Similarity=0.256 Sum_probs=181.2
Q ss_pred EeccCCceEEEEEEECC---CCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE-ecCeEEEE
Q 001034 876 YLGSAAFSKAIQAHDLH---TGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY-YREHLLIV 949 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~---TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq-d~e~LyLV 949 (1182)
.||+|+||.||+|.... ....+|+|.+... ......+..|+.+++.+. ||||+++++++. .....++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~~lv 75 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFS------HPNVLSLLGICLPSEGSPLVV 75 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCC------CCCcceEEEEeecCCCCcEEE
Confidence 68999999999998653 3457999988543 233456667777777665 458999999765 45568999
Q ss_pred EEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcccc
Q 001034 950 CELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 950 mEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|||+. ++|.+++..... .+....+..++.||+.||.|||+.+++||||||+|||++. .+.+||+|||+++..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~--~~~~kl~dfg~~~~~ 148 (262)
T cd05058 76 LPYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDE--SFTVKVADFGLARDI 148 (262)
T ss_pred EecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC--CCcEEECCccccccc
Confidence 99998 467777654321 1566778889999999999999999999999999999984 677999999998643
Q ss_pred CCC-------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhh
Q 001034 1029 TDH-------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1029 ~~~-------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
... .....++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+.......+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~-------- 220 (262)
T cd05058 149 YDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR-------- 220 (262)
T ss_pred cCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC--------
Confidence 321 112345678999999998899999999999999999999 5677876665544333310000
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
... ....+..+.+||.+||..+|++||++.++++.
T Consensus 221 --------------------------~~~---------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 221 --------------------------LLQ---------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred --------------------------CCC---------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 000 01235689999999999999999999999873
No 359
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=7.9e-32 Score=283.95 Aligned_cols=246 Identities=22% Similarity=0.245 Sum_probs=184.2
Q ss_pred EeccCCceEEEEEEEC--CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDL--HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk--~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||+|+||.||+|... .++..+|+|.++... .....+.+|+.+++.+.| |||+++++++.....+++|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h------~~iv~~~~~~~~~~~~~lv~e 75 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQH------SNLLQCLGQCTEVTPYLLVME 75 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCC------CCEeeEEEEEcCCCCcEEEEE
Confidence 6899999999999754 456789999987543 223456778888888754 489999999999999999999
Q ss_pred ecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 952 LLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|++ |+|.+++..... .....++...++.++.||+.||.|||+.+++|+||||+|||++. .+.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~--~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRK-AELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTA--DLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhh-cccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcC--CCcEEECCccccccccC
Confidence 998 567777764432 12233667778889999999999999999999999999999985 67899999999864332
Q ss_pred C-----cccccCCCcccchhhhcCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1031 H-----LCSYVQSRSYRAPEVILGL-------SYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1031 ~-----~ss~vGTp~YmAPEVLlg~-------~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
. .....++..|+|||++... .++.++|+|||||++|+|++ |++||......+.+...+...
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~------ 226 (269)
T cd05087 153 EDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ------ 226 (269)
T ss_pred cceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc------
Confidence 2 1224567889999998642 36789999999999999996 999998766554433221000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
......|. .....+..+.++|.+|+ .+|.+|||+.+|+.
T Consensus 227 --------------------------~~~~~~~~------~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 227 --------------------------QLKLPKPR------LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------------------------cCCCCCCc------cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 00000000 01123567899999998 68999999999985
No 360
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.1e-32 Score=285.24 Aligned_cols=260 Identities=23% Similarity=0.291 Sum_probs=194.8
Q ss_pred CCEEEEEEeccCCceEEEEEEEC----CCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL----HTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk----~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..|++.+.||+|+||.||+|... .++..+|+|++..... ....+..|+.+++.+.|+ ||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~------~i~~~~~~~~~ 77 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHE------NIVKYKGVCEK 77 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCC------ChheEEeeeec
Confidence 46888899999999999999854 3588999999986654 356788888888887654 89999999887
Q ss_pred --cCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEE
Q 001034 943 --REHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKV 1019 (1182)
Q Consensus 943 --~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKL 1019 (1182)
...+++||||+.+ +|.+++..... .+++..+..++.||+.||.|||+.||+|+||||+|||++. ++.++|
T Consensus 78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~--~~~~~l 150 (284)
T cd05038 78 PGGRSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVES--EDLVKI 150 (284)
T ss_pred CCCCceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC--CCCEEE
Confidence 5689999999974 78777765432 2888899999999999999999999999999999999985 678999
Q ss_pred ecCCCccccCCCcc------cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1020 IDLGSSCFETDHLC------SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1020 iDFGLA~~~~~~~s------s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp 1093 (1182)
+|||++........ ...++..|+|||.+.+..++.++|+|||||++|+|++|..||....... +...++
T Consensus 151 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~ 225 (284)
T cd05038 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----LRMIGI 225 (284)
T ss_pred cccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh-----cccccc
Confidence 99999876542211 1234556999999998899999999999999999999999986543211 111111
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+... ..... ...+.... ........+..+.+||.+||+++|.+|||+.+|++
T Consensus 226 ~~~~~----------------~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 226 AQGQM----------------IVTRL--LELLKEGE-----RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred ccccc----------------cHHHH--HHHHHcCC-----cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 10000 00000 00000000 00111234578999999999999999999999986
No 361
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=297.80 Aligned_cols=253 Identities=24% Similarity=0.366 Sum_probs=199.3
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--- 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--- 943 (1182)
..||+|.+.||.|+|+-|++++...+++.||+|.+.-.. ...+..++|+...+.++++ ||++++++....
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~------~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSP------NVLRLVDHQLREEKD 93 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCc------chHHHHHHHHHhhcc
Confidence 479999999999999999999999999999999886543 5567778888888888664 899998876554
Q ss_pred --CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--ccccccCCccEEEccCCCceEE
Q 001034 944 --EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG--LIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 944 --e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G--IIHRDIKPeNILIDs~~dG~IK 1018 (1182)
...||+++|.. |+|.+.+......+. ++++.++..|+.+|++||++||+.. ++||||||.|||+.. .+.++
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~--~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~--~~~~v 169 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGN--FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSD--SGLPV 169 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCC--ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecC--CCceE
Confidence 34999999987 779999987765433 5999999999999999999999998 999999999999994 67899
Q ss_pred EecCCCccccCCCcc------------cccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 001034 1019 VIDLGSSCFETDHLC------------SYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATL 1083 (1182)
Q Consensus 1019 LiDFGLA~~~~~~~s------------s~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~el 1083 (1182)
|.|||.++....... .-.-|..|+|||++. +...+.++|||||||+||+|+.|..||..
T Consensus 170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~------ 243 (302)
T KOG2345|consen 170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER------ 243 (302)
T ss_pred EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH------
Confidence 999999875432211 123378899999995 44678999999999999999999999932
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS 1163 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT 1163 (1182)
+.+.-|.+... ....+..+|. ...+++.+.+||..||+.||.+||+
T Consensus 244 ---~~~~GgSlaLA------------------------v~n~q~s~P~-------~~~yse~l~~lik~mlqvdP~qRP~ 289 (302)
T KOG2345|consen 244 ---IYQQGGSLALA------------------------VQNAQISIPN-------SSRYSEALHQLIKSMLQVDPNQRPT 289 (302)
T ss_pred ---HhhcCCeEEEe------------------------eeccccccCC-------CCCccHHHHHHHHHHhcCCcccCCC
Confidence 21111111100 0011112222 2337899999999999999999999
Q ss_pred HHHHHcC
Q 001034 1164 ASDALKH 1170 (1182)
Q Consensus 1164 AeELLqH 1170 (1182)
+.++|.+
T Consensus 290 i~~ll~~ 296 (302)
T KOG2345|consen 290 IPELLSK 296 (302)
T ss_pred HHHHHHH
Confidence 9999875
No 362
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-33 Score=325.37 Aligned_cols=247 Identities=27% Similarity=0.466 Sum_probs=209.7
Q ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEEEe-----ccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe--
Q 001034 873 VTEYLGSAAFSKAIQAHDLHTGMDVCVKIIK-----NNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH-- 945 (1182)
Q Consensus 873 Ilk~LGkGaFGeVyLAkDk~TGr~VAVKIIk-----k~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~-- 945 (1182)
...+||+|+|-+||+|.|..+|..||--.++ +.....+.+..|+.+|+.|+|+ |||++|+++.+...
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~------NIirfy~SW~d~~n~~ 117 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHP------NIIRFYDSWVDTDNKT 117 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCC------ceeeeeeheecCCCce
Confidence 4468999999999999999999998854433 2344557889999999998765 89999999998755
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--ccccccCCccEEEccCCCceEEEecC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG--LIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G--IIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+.+|+|++. |+|+.|.+..+. +....++.|++||+.||.|||++. |||||||.+||||+. ..|.|||.|+
T Consensus 118 in~iTEL~TSGtLr~Y~kk~~~------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG-~~G~VKIGDL 190 (632)
T KOG0584|consen 118 INFITELFTSGTLREYRKKHRR------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG-NLGEVKIGDL 190 (632)
T ss_pred eeeeeecccCCcHHHHHHHhcc------CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC-CcCceeecch
Confidence 889999998 789999887765 778899999999999999999875 999999999999995 6789999999
Q ss_pred CCccccCCC-cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhcCCcchhhhh
Q 001034 1023 GSSCFETDH-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN-DSPATLLARVIGIIGPIEQGMLA 1100 (1182)
Q Consensus 1023 GLA~~~~~~-~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~elLakIv~ilGp~PeemL~ 1100 (1182)
|+|+..... ..+.+|||.|||||++. ..|+..+||||||+.|+||+|+..||.- .++.+++++++....| ..+
T Consensus 191 GLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP--~sl-- 265 (632)
T KOG0584|consen 191 GLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP--AAL-- 265 (632)
T ss_pred hHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH--HHh--
Confidence 999876654 44569999999999998 7899999999999999999999999975 7788889888643322 211
Q ss_pred cccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1101 KGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1101 ~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
....++++++||.+||.. ...|||+.|||+||||...
T Consensus 266 --------------------------------------~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 266 --------------------------------------SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred --------------------------------------hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 011258899999999999 9999999999999999874
No 363
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7e-32 Score=308.06 Aligned_cols=254 Identities=20% Similarity=0.295 Sum_probs=197.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.++|.+.+.||.|+||.||+|.+. .+++.||+|+++... .....+..|+.+|..+.. ||||+++++++
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~-----H~niv~~~~~~ 110 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGP-----HLNIVNLLGAC 110 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCC-----CCCeEEEEEEE
Confidence 467889999999999999999853 456789999997542 223467789999988852 45999999999
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhccc----------------------------------------------------
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRES---------------------------------------------------- 967 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~s---------------------------------------------------- 967 (1182)
....++||||||+. |+|.+++..+...
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999999 5788877654210
Q ss_pred ----------------------------------------CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccE
Q 001034 968 ----------------------------------------GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENI 1007 (1182)
Q Consensus 968 ----------------------------------------ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNI 1007 (1182)
.....+++..+..|+.||+.||.|||+.+|+||||||.||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 0011367778889999999999999999999999999999
Q ss_pred EEccCCCceEEEecCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHH
Q 001034 1008 LVKSYSRCEVKVIDLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPA 1081 (1182)
Q Consensus 1008 LIDs~~dG~IKLiDFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~ 1081 (1182)
|++. .+.+||+|||+++..... .....+++.|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 271 Ll~~--~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 271 LICE--GKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred EEeC--CCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 9984 678999999998753221 223456788999999999899999999999999999998 89999765544
Q ss_pred HHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1082 TLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1082 elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
+.+...+.. + ... .....++..+.+||.+||..+|.+|
T Consensus 349 ~~~~~~~~~-~--------------------------------~~~---------~~p~~~~~~l~~li~~cl~~~P~~R 386 (401)
T cd05107 349 EQFYNAIKR-G--------------------------------YRM---------AKPAHASDEIYEIMQKCWEEKFEIR 386 (401)
T ss_pred HHHHHHHHc-C--------------------------------CCC---------CCCCCCCHHHHHHHHHHcCCChhHC
Confidence 333222100 0 000 0112346889999999999999999
Q ss_pred CCHHHHHcC
Q 001034 1162 PSASDALKH 1170 (1182)
Q Consensus 1162 PTAeELLqH 1170 (1182)
|++.+|++.
T Consensus 387 Ps~~ell~~ 395 (401)
T cd05107 387 PDFSQLVHL 395 (401)
T ss_pred cCHHHHHHH
Confidence 999999874
No 364
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=327.04 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=215.2
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc----chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN----KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~----k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
.+++++..||.|+||.|=++.-......+|+|++++. ..+.+++..|..|+..+..+ +||+||..|.+..
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~------fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSD------FIVRLYRTFRDSK 493 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCch------HHHHHHHHhccch
Confidence 3456777899999999999987666556999999864 35567888899999888644 9999999999999
Q ss_pred eEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
++|++||.|-| .+...++.+. .|....+++|+.+++.|++|||++|||+|||||+|+|++ .+|.+||.|||
T Consensus 494 yvYmLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd--~~Gy~KLVDFG 565 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD--NRGYLKLVDFG 565 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec--cCCceEEeehh
Confidence 99999999875 5777666443 289999999999999999999999999999999999999 48899999999
Q ss_pred CccccCC--CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1024 SSCFETD--HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1024 LA~~~~~--~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
+|+.... .+.++||||.|.|||+++.+..+.++|+||||+++||||+|.+||.+.++..++..|+..+..+.
T Consensus 566 FAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~------ 639 (732)
T KOG0614|consen 566 FAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE------ 639 (732)
T ss_pred hHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh------
Confidence 9987554 56689999999999999999999999999999999999999999999999999999974332210
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC-----HHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS-----ASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT-----AeELLqHPWFk~~ 1176 (1182)
+| ..+...+.+||+++...+|.+|+. ..+|-+|-||...
T Consensus 640 ---------------------------~P---------r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 640 ---------------------------FP---------RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred ---------------------------cc---------cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcC
Confidence 11 123456889999999999999987 8899999999765
No 365
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=3.4e-32 Score=323.75 Aligned_cols=275 Identities=20% Similarity=0.185 Sum_probs=178.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCC----CcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE----
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHT----GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY---- 939 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~T----Gr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds---- 939 (1182)
.++|.+.+.||+|+||.||+|.+..+ +..||+|.+..... .|..+...+.+.. +.++..++..
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~---~~~~~~~~~~~~~~ 201 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC---PNSCADFVYGFLEP 201 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc---hhhHHHHHHhhhcc
Confidence 46899999999999999999999988 99999998864321 1222222222110 0011111111
Q ss_pred --EEecCeEEEEEEeccc-ChHHHHhhhcccC--------------CccccCHHHHHHHHHHHHHHHHHHHhcCcccccc
Q 001034 940 --FYYREHLLIVCELLKA-NLYEFHKFNRESG--------------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDL 1002 (1182)
Q Consensus 940 --Fqd~e~LyLVmEyL~G-sLld~Lk~~~~sg--------------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDI 1002 (1182)
......++|||||+.+ +|.+++....... .........+..++.||+.||.|||+.+|+||||
T Consensus 202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL 281 (566)
T PLN03225 202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV 281 (566)
T ss_pred cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence 2345679999999985 5777765332100 0001223456789999999999999999999999
Q ss_pred CCccEEEccCCCceEEEecCCCccccCC----CcccccCCCcccchhhhcCC----------------------CCCchh
Q 001034 1003 KPENILVKSYSRCEVKVIDLGSSCFETD----HLCSYVQSRSYRAPEVILGL----------------------SYDKKI 1056 (1182)
Q Consensus 1003 KPeNILIDs~~dG~IKLiDFGLA~~~~~----~~ss~vGTp~YmAPEVLlg~----------------------~yS~kS 1056 (1182)
||+|||++. ..+.+||+|||+++.... .....++++.|+|||.+... .++.++
T Consensus 282 KP~NILl~~-~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSE-GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeC-CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999984 356899999999975432 23456789999999976432 234567
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccc
Q 001034 1057 DIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLR 1136 (1182)
Q Consensus 1057 DIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~ 1136 (1182)
||||||||||||+++..|+ .+....+.+++...+.....|.... ... ..+......
T Consensus 361 DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~--------------~~~--------~~~~~~~~~ 416 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKLV--------------EPR--------ASPDLRRGF 416 (566)
T ss_pred ccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHhh--------------ccc--------cchhhhhhh
Confidence 9999999999999976654 3333334444332222111110000 000 000000001
Q ss_pred cCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1137 HRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1137 ~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.........+.+||.+||++||++|||+.++|+||||+..
T Consensus 417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~ 456 (566)
T PLN03225 417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDRE 456 (566)
T ss_pred hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence 1122334567899999999999999999999999999864
No 366
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1e-31 Score=289.84 Aligned_cols=246 Identities=20% Similarity=0.268 Sum_probs=190.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCc----EEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGM----DVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr----~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
..+|++.+.||.|+||.||++.+..++. .+|+|++.... .....+..|+.+++.+.| +||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h------~niv~~~~~~~ 79 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH------PHLVRLLGVCL 79 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC------CCcccEEEEEc
Confidence 4578999999999999999999887776 46888886543 222345677777777754 58999999887
Q ss_pred ecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
.. ..++|++|+. |+|.+++..... .+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~--~~~~kL~ 151 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKS--PNHVKIT 151 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecC--CCceEEc
Confidence 54 5679999998 567777654321 2788889999999999999999999999999999999984 6679999
Q ss_pred cCCCccccCCC-----cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1021 DLGSSCFETDH-----LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1021 DFGLA~~~~~~-----~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
|||+++..... .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.........+. ....
T Consensus 152 Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~- 229 (303)
T cd05110 152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-KGER- 229 (303)
T ss_pred cccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCC-
Confidence 99999754322 112344678999999999999999999999999999997 999998765444332221 0000
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
. ...+..+..+.+||.+|+..+|++||++.++++.
T Consensus 230 ----------------------------------~-------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 230 ----------------------------------L-------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred ----------------------------------C-------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 0 0112345788999999999999999999998874
No 367
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-31 Score=286.11 Aligned_cols=239 Identities=19% Similarity=0.265 Sum_probs=177.8
Q ss_pred EeccCCceEEEEEEECC------------------------CCcEEEEEEEeccch-hhHHHHHHHHHHHHhcCCCCCCC
Q 001034 876 YLGSAAFSKAIQAHDLH------------------------TGMDVCVKIIKNNKD-FFDQSLDEIKLLKYVNKHDPGDK 930 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~------------------------TGr~VAVKIIkk~k~-~~dq~l~EikILr~L~h~~~l~H 930 (1182)
.||+|+||.||++.... ....||+|++..... ....+.+|+.+++.+. |
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~------h 75 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVS------H 75 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCC------C
Confidence 58999999999987432 124588898865432 2334556666666664 5
Q ss_pred cceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEc
Q 001034 931 YHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVK 1010 (1182)
Q Consensus 931 PnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILID 1010 (1182)
|||+++++++......|+||||++++.+..+..... ..+++..+..++.||+.||.|||+.+|+||||||+|||++
T Consensus 76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~ 151 (274)
T cd05076 76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK----GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLA 151 (274)
T ss_pred CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEe
Confidence 599999999999999999999999765444432211 1378888999999999999999999999999999999997
Q ss_pred cCC-----CceEEEecCCCccccCCCcccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHH
Q 001034 1011 SYS-----RCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELC-TGNVLFQNDSPATL 1083 (1182)
Q Consensus 1011 s~~-----dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELL-TGr~PF~g~d~~el 1083 (1182)
..+ ...+||+|||++...... ....++..|+|||++.+ ..++.++|||||||++|+|+ +|..||....+.+.
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 230 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK 230 (274)
T ss_pred ccCcccCccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH
Confidence 522 234899999987543222 23457788999999875 56899999999999999995 69999977654332
Q ss_pred HHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCC
Q 001034 1084 LARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPS 1163 (1182)
Q Consensus 1084 LakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPT 1163 (1182)
...+. . ....| ......+.+||.+||+.+|.+|||
T Consensus 231 ~~~~~-~-----------------------------------~~~~~---------~~~~~~~~~li~~cl~~~p~~Rps 265 (274)
T cd05076 231 ERFYE-K-----------------------------------KHRLP---------EPSCKELATLISQCLTYEPTQRPS 265 (274)
T ss_pred HHHHH-h-----------------------------------ccCCC---------CCCChHHHHHHHHHcccChhhCcC
Confidence 21110 0 00000 112357899999999999999999
Q ss_pred HHHHHcC
Q 001034 1164 ASDALKH 1170 (1182)
Q Consensus 1164 AeELLqH 1170 (1182)
+.++|++
T Consensus 266 ~~~il~~ 272 (274)
T cd05076 266 FRTILRD 272 (274)
T ss_pred HHHHHHh
Confidence 9999975
No 368
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=4.1e-31 Score=279.47 Aligned_cols=245 Identities=19% Similarity=0.207 Sum_probs=181.6
Q ss_pred EeccCCceEEEEEEECCC--CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 876 YLGSAAFSKAIQAHDLHT--GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~T--Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.||+|+||.||++..... ...+++|.+.... .....+.+|+.+++.++ ||||+++++.|.....+|+|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~------h~~iv~~~~~~~~~~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQ------HPNILQCLGQCVEAIPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccC------CcchhheEEEecCCCccEEEEe
Confidence 589999999999975332 3456677766442 23456777777777665 4599999999999999999999
Q ss_pred eccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 952 LLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 952 yL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|+.+ +|..++...... ...++...++.++.||+.||.|||+.+++||||||+|||++. ++.++|+|||++.....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~--~~~~~l~Dfg~~~~~~~ 151 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTS--DLTVKVGDYGIGPSRYK 151 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcC--CccEEecccccccccCc
Confidence 9995 777777643221 112667778899999999999999999999999999999984 77899999999764221
Q ss_pred -----CcccccCCCcccchhhhcC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchh
Q 001034 1031 -----HLCSYVQSRSYRAPEVILG-------LSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQG 1097 (1182)
Q Consensus 1031 -----~~ss~vGTp~YmAPEVLlg-------~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Pee 1097 (1182)
.....+++..|+|||++.. ..++.++|||||||++|+|++ |.+||...+..+.+..++.....
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---- 227 (268)
T cd05086 152 EDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQV---- 227 (268)
T ss_pred chhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccc----
Confidence 1224567889999999853 346789999999999999997 57899877766655554311000
Q ss_pred hhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1098 MLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1098 mL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
....| ......+..+.++|..|+ .+|.+||++.+|++
T Consensus 228 ----------------------------~~~~~------~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 228 ----------------------------KLFKP------QLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred ----------------------------ccCCC------ccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 00000 011234678899999999 68999999999976
No 369
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=4.2e-31 Score=266.34 Aligned_cols=238 Identities=35% Similarity=0.522 Sum_probs=194.5
Q ss_pred CceEEEEEEECCCCcEEEEEEEeccchh--hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc-Ch
Q 001034 881 AFSKAIQAHDLHTGMDVCVKIIKNNKDF--FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA-NL 957 (1182)
Q Consensus 881 aFGeVyLAkDk~TGr~VAVKIIkk~k~~--~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G-sL 957 (1182)
+||.||+|....+++.+|+|++...... ...+..|++.++.+.+ ++|+++++++......++|||++.+ +|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH------PNIVRLYDVFEDEDKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC------CcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence 5899999999989999999999765422 4677888898888844 4899999999999999999999997 77
Q ss_pred HHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCC--Ccccc
Q 001034 958 YEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD--HLCSY 1035 (1182)
Q Consensus 958 ld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~--~~ss~ 1035 (1182)
..++..... ++...+..++.+++.+|.|||+.+++|+||+|.||+++. .+.++|+|||.+..... .....
T Consensus 75 ~~~~~~~~~------~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~--~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 75 FDLLKKRGR------LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDE--DGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred HHHHHhccC------CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECC--CCcEEEccccceeeeccccccccc
Confidence 777664321 788899999999999999999999999999999999995 57899999999876554 34456
Q ss_pred cCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhhcCCcchhhhhcccccchhhcccch
Q 001034 1036 VQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN-DSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHM 1114 (1182)
Q Consensus 1036 vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~ 1114 (1182)
.++..|+|||.+.+..++.++|+||||+++|+|++|..||.. ......+..+.......
T Consensus 147 ~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------- 206 (244)
T smart00220 147 VGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-------------------- 206 (244)
T ss_pred cCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC--------------------
Confidence 788899999999988899999999999999999999999977 44433333321000000
Q ss_pred hhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCC
Q 001034 1115 LYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWL 1173 (1182)
Q Consensus 1115 ~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWF 1173 (1182)
......++..+.+||.+||..+|.+||++.++++||||
T Consensus 207 ---------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 207 ---------------------PPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred ---------------------ccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 00001146789999999999999999999999999998
No 370
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.98 E-value=7.4e-33 Score=317.68 Aligned_cols=233 Identities=28% Similarity=0.403 Sum_probs=192.9
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
++.||.|+.|-||+++ ..++.||||.++.-+ ..+++.|++|.|+ ||+.+.++|...-.+|||||||
T Consensus 129 LeWlGSGaQGAVF~Gr--l~netVAVKKV~elk------ETdIKHLRkLkH~------NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGR--LHNETVAVKKVRELK------ETDIKHLRKLKHP------NIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhccCcccceeeee--ccCceehhHHHhhhh------hhhHHHHHhccCc------ceeeEeeeecCCceeEEeeecc
Confidence 5689999999999997 467899999775322 3567778887655 8999999999999999999999
Q ss_pred c-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC-
Q 001034 954 K-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH- 1031 (1182)
Q Consensus 954 ~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~- 1031 (1182)
. |.|++.++..+. ++......|..+|+.++.|||.+.|||||||.-||||.. +..|||+|||-++-..+.
T Consensus 195 a~GqL~~VLka~~~------itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~--~d~VKIsDFGTS~e~~~~S 266 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRP------ITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY--DDVVKISDFGTSKELSDKS 266 (904)
T ss_pred ccccHHHHHhccCc------cCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec--cceEEeccccchHhhhhhh
Confidence 8 789998886553 788889999999999999999999999999999999995 556999999998765443
Q ss_pred -cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhc
Q 001034 1032 -LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFT 1110 (1182)
Q Consensus 1032 -~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~ 1110 (1182)
.-+++||..|||||+|...+.+.++|||||||+|||||||..||.+-+... |+...
T Consensus 267 TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA----IIwGV------------------- 323 (904)
T KOG4721|consen 267 TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA----IIWGV------------------- 323 (904)
T ss_pred hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe----eEEec-------------------
Confidence 347899999999999999999999999999999999999999997654322 11111
Q ss_pred ccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1111 KNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1111 k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
....+.++.| ..++..|+=||++||...|..||++.++|.|
T Consensus 324 ----------GsNsL~LpvP---------stcP~GfklL~Kqcw~sKpRNRPSFrqil~H 364 (904)
T KOG4721|consen 324 ----------GSNSLHLPVP---------STCPDGFKLLLKQCWNSKPRNRPSFRQILLH 364 (904)
T ss_pred ----------cCCcccccCc---------ccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence 1122223333 2456789999999999999999999999998
No 371
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=5e-33 Score=294.47 Aligned_cols=281 Identities=22% Similarity=0.396 Sum_probs=218.2
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--C
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--E 944 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e 944 (1182)
-.++|+|.+++|+|-|++||.+.+..+.+.++||+++.-+ ...+.+|++||+.|.. +|||++|+++..+. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~g-----g~NIi~L~DiV~Dp~Sk 108 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRG-----GPNIIKLLDIVKDPESK 108 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccC-----CCCeeehhhhhcCcccc
Confidence 3578999999999999999999999999999999998655 4678899999999973 45999999999876 4
Q ss_pred eEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
...||+||+... ...+.. .++...++.+++||+.||.|||++||+|||+||.|++|+. ..-.++|+|+|
T Consensus 109 tpaLiFE~v~n~Dfk~ly~---------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh-~~rkLrlIDWG 178 (338)
T KOG0668|consen 109 TPSLIFEYVNNTDFKQLYP---------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH-ELRKLRLIDWG 178 (338)
T ss_pred CchhHhhhhccccHHHHhh---------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech-hhceeeeeecc
Confidence 578999999854 332222 1777889999999999999999999999999999999996 45579999999
Q ss_pred CccccCCC--cccccCCCcccchhhhcC-CCCCchhhHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1024 SSCFETDH--LCSYVQSRSYRAPEVILG-LSYDKKIDIWSLGCILAELCTGNVLF-QNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1024 LA~~~~~~--~ss~vGTp~YmAPEVLlg-~~yS~kSDIWSLGVILYELLTGr~PF-~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
+|.+.... .+-.+.+..|.-||++.. ..|+.+.|+|||||+|..|+..+-|| .+.++.+++-+|...+|.-...
T Consensus 179 LAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~-- 256 (338)
T KOG0668|consen 179 LAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELY-- 256 (338)
T ss_pred hHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHH--
Confidence 99875443 344567889999999875 56899999999999999999988775 6888899999999888853221
Q ss_pred hcccccchhhcccchhh-------hhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1100 AKGRDTYKYFTKNHMLY-------ERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~-------er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
.+..+..... ............++. .....++++++|||.++|.+|..+|+||.|++.|||
T Consensus 257 -------~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~-----~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy 324 (338)
T KOG0668|consen 257 -------AYLNKYQIDLDPQFEDILGRHSRKPWSRFINS-----ENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY 324 (338)
T ss_pred -------HHHHHHccCCChhHhhHhhccccccHHHhCCc-----cccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence 1111111110 001111111111111 112234799999999999999999999999999999
Q ss_pred CCCCCC
Q 001034 1173 LSHPYE 1178 (1182)
Q Consensus 1173 Fk~~~e 1178 (1182)
|.-..+
T Consensus 325 F~~~~~ 330 (338)
T KOG0668|consen 325 FAPVRE 330 (338)
T ss_pred HHHHHH
Confidence 975433
No 372
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.1e-32 Score=300.04 Aligned_cols=253 Identities=23% Similarity=0.336 Sum_probs=203.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.++|.++.+||+|+|++|.+++.++|.+.||||++++.- ...+-...|..+..... .||++|-|+..|+..
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfqte 323 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQTE 323 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhccc
Confidence 468999999999999999999999999999999998642 22333445555555543 467999999999999
Q ss_pred CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 944 EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 944 e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..+++|.||++|+.+.|+-.++.. +++..++++..+|+.||.|||+.|||+||||.+|||++. .|+|||+|+|
T Consensus 324 srlffvieyv~ggdlmfhmqrqrk-----lpeeharfys~ei~lal~flh~rgiiyrdlkldnvllda--eghikltdyg 396 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQRK-----LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDA--EGHIKLTDYG 396 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhhc-----CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEcc--CCceeecccc
Confidence 999999999998766554433322 999999999999999999999999999999999999995 7889999999
Q ss_pred Cccc---cCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC-------CCHHHHHHHHHhhcCC
Q 001034 1024 SSCF---ETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN-------DSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1024 LA~~---~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g-------~d~~elLakIv~ilGp 1093 (1182)
.++- ..+.+.++||||.|+|||++.+..|+..+|||+|||+||||+.|+.||.- .+.++.+.+++
T Consensus 397 mcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi----- 471 (593)
T KOG0695|consen 397 MCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI----- 471 (593)
T ss_pred hhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH-----
Confidence 9863 45567789999999999999999999999999999999999999999942 22333333332
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCC------CHHHH
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRP------SASDA 1167 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRP------TAeEL 1167 (1182)
++.++... .-.+..+..+|+..|.+||.+|+ ...++
T Consensus 472 -------------------------------lekqirip-------rslsvkas~vlkgflnkdp~erlgc~~~~g~~di 513 (593)
T KOG0695|consen 472 -------------------------------LEKQIRIP-------RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDI 513 (593)
T ss_pred -------------------------------hhhccccc-------ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhh
Confidence 11111111 12245667889999999999995 47899
Q ss_pred HcCCCCCC
Q 001034 1168 LKHPWLSH 1175 (1182)
Q Consensus 1168 LqHPWFk~ 1175 (1182)
-.||||..
T Consensus 514 k~h~ffr~ 521 (593)
T KOG0695|consen 514 KSHAFFRS 521 (593)
T ss_pred hcchhhhh
Confidence 99999974
No 373
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.1e-31 Score=304.16 Aligned_cols=197 Identities=23% Similarity=0.352 Sum_probs=167.5
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchh-hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC-eE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF-FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE-HL 946 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~-~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e-~L 946 (1182)
+.|.-...||+|+||.||++.- .++..||||.+...... ..++.+|+.+|.+++|+ |||+|+++|.+.. +.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~------Nlv~LlGyC~e~~~~~ 147 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHP------NLVKLLGYCLEGGEHR 147 (361)
T ss_pred hCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCc------CcccEEEEEecCCceE
Confidence 4566667899999999999985 55589999988776544 56699999999999765 8999999999998 59
Q ss_pred EEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC---ccccccCCccEEEccCCCceEEEecC
Q 001034 947 LIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG---LIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 947 yLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G---IIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+||+|||. |+|.+.+...... .+++.....|+.+++.||+|||... ||||||||.|||+| .+...||+||
T Consensus 148 ~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD--~~~~aKlsDF 221 (361)
T KOG1187|consen 148 LLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD--EDFNAKLSDF 221 (361)
T ss_pred EEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC--CCCCEEccCc
Confidence 99999999 5777766543321 5899999999999999999999843 99999999999999 4788999999
Q ss_pred CCccccCC-Ccc--cc-cCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Q 001034 1023 GSSCFETD-HLC--SY-VQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQND 1078 (1182)
Q Consensus 1023 GLA~~~~~-~~s--s~-vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~ 1078 (1182)
|+|+.... ... .. .||..|+|||.+..+..+.++||||||++|+||+||+.+....
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~ 281 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQS 281 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCC
Confidence 99976654 222 22 7999999999999999999999999999999999999888653
No 374
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=314.81 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=201.2
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
++..+...+...||+|.||+||+++.-. .||||++... ....+.+..|+..|+..+|. ||+-+++++.
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~------NIlLFMG~~~ 458 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHE------NILLFMGACM 458 (678)
T ss_pred ccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchh------hheeeehhhc
Confidence 4455667888999999999999998643 4999999754 45678899999999999887 8999999998
Q ss_pred ecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 942 YREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 942 d~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
.+.. .||+.+|.| +|+.++...... |.+...+.|++||++|+.|||.++|||||||..|||+.. ++.|||+
T Consensus 459 ~p~~-AIiTqwCeGsSLY~hlHv~etk-----fdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~--~~kVkIg 530 (678)
T KOG0193|consen 459 NPPL-AIITQWCEGSSLYTHLHVQETK-----FDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHE--DLKVKIG 530 (678)
T ss_pred CCce-eeeehhccCchhhhhccchhhh-----hhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEcc--CCcEEEe
Confidence 8777 899999998 577777655432 899999999999999999999999999999999999994 5889999
Q ss_pred cCCCccccC-----CCcccccCCCcccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFET-----DHLCSYVQSRSYRAPEVILG---LSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~-----~~~ss~vGTp~YmAPEVLlg---~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||++.... ......-|...|||||++.- .+|+..+|||||||++|||+||..||...+.++++.++-
T Consensus 531 DFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG---- 606 (678)
T KOG0193|consen 531 DFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG---- 606 (678)
T ss_pred cccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec----
Confidence 999986532 23445567888999999964 479999999999999999999999998666554433321
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+ +..|. +.....+...++++|+..|+.+++++||.+.+||.
T Consensus 607 --------rG------------------------~l~pd---~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 607 --------RG------------------------YLMPD---LSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred --------cc------------------------ccCcc---chhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 00 00111 11123345679999999999999999999999887
No 375
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.2e-33 Score=341.32 Aligned_cols=252 Identities=31% Similarity=0.426 Sum_probs=207.0
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.-+++-...||.|.||.||.|.+..+|...|||-++.. ...+..+.+|+.+|..++|+ |+|++|++-.+.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHp------NlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHP------NLVRYYGVEVHR 1306 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCc------cccccCceeecH
Confidence 456788888999999999999999999999999988653 34566788999999999876 899999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+.++|.||||.| +|.+++...+. ..+...+.+..|++.||.|||+.|||||||||.|||++. +|.||+.||
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gri------~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~--~g~iK~~DF 1378 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRI------EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDF--NGLIKYGDF 1378 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcch------hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeec--CCcEEeecc
Confidence 999999999996 55555554332 678888999999999999999999999999999999994 778999999
Q ss_pred CCccccCCCc-------ccccCCCcccchhhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHH-Hhh
Q 001034 1023 GSSCFETDHL-------CSYVQSRSYRAPEVILGL---SYDKKIDIWSLGCILAELCTGNVLFQNDSP-ATLLARV-IGI 1090 (1182)
Q Consensus 1023 GLA~~~~~~~-------ss~vGTp~YmAPEVLlg~---~yS~kSDIWSLGVILYELLTGr~PF~g~d~-~elLakI-v~i 1090 (1182)
|.|.....+. ....||+.|||||++.+. +...+.|||||||++.||+||+.||...+. -+++-.+ +..
T Consensus 1379 Gsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh 1458 (1509)
T KOG4645|consen 1379 GSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH 1458 (1509)
T ss_pred cceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC
Confidence 9997654432 457899999999999754 577899999999999999999999976332 2222222 111
Q ss_pred cCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1091 IGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1091 lGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
.+++ |. .++.+.++||.+||+.||++|+++.|||+|
T Consensus 1459 ~Pq~-----------------------------------P~---------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 KPQI-----------------------------------PE---------RLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CCCC-----------------------------------ch---------hhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 1111 11 247889999999999999999999999999
Q ss_pred CCCCCC
Q 001034 1171 PWLSHP 1176 (1182)
Q Consensus 1171 PWFk~~ 1176 (1182)
-|=+..
T Consensus 1495 ~f~~~~ 1500 (1509)
T KOG4645|consen 1495 AFGKSC 1500 (1509)
T ss_pred hccccc
Confidence 987654
No 376
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=3.6e-31 Score=316.89 Aligned_cols=250 Identities=22% Similarity=0.294 Sum_probs=210.1
Q ss_pred cCCEEEEEEeccCCceEEEEEEEC-----CCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDL-----HTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk-----~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
..+.++.+.||+|+||+||+|+-. .....||||.++... ....++.+|+.++..++|+ |||+|++.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~------nIVrLlGVC 558 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHP------NIVRLLGVC 558 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCC------CeEEEEEEE
Confidence 456778899999999999999853 344679999998654 3567889999999999765 899999999
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhcccCCcc--------ccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRESGGEV--------YFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS 1011 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~sggel--------~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs 1011 (1182)
..++.+|+|+|||. |+|.+|++.+....... .++..+...|+.||+.|++||-++.+|||||-..|+||.
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg- 637 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG- 637 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec-
Confidence 99999999999999 89999998765433221 388889999999999999999999999999999999998
Q ss_pred CCCceEEEecCCCccccCCCcc-----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 001034 1012 YSRCEVKVIDLGSSCFETDHLC-----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLA 1085 (1182)
Q Consensus 1012 ~~dG~IKLiDFGLA~~~~~~~s-----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLa 1085 (1182)
.+..|||+|||+++..-...+ ...-+.+|||||.|...+|+.++||||+||+|||+++ |..||++.++++++.
T Consensus 638 -e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 638 -ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred -cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 477899999999975332222 2234788999999999999999999999999999998 999999999999988
Q ss_pred HHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 001034 1086 RVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSAS 1165 (1182)
Q Consensus 1086 kIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAe 1165 (1182)
.|.+ + .+......++.++.+|+..|++.+|.+||++.
T Consensus 717 ~i~~------------g-------------------------------~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~ 753 (774)
T KOG1026|consen 717 CIRA------------G-------------------------------QLLSCPENCPTEVYSLMLECWNENPKRRPSFK 753 (774)
T ss_pred HHHc------------C-------------------------------CcccCCCCCCHHHHHHHHHHhhcCcccCCCHH
Confidence 8831 0 11123346688999999999999999999999
Q ss_pred HHH
Q 001034 1166 DAL 1168 (1182)
Q Consensus 1166 ELL 1168 (1182)
||-
T Consensus 754 eI~ 756 (774)
T KOG1026|consen 754 EIH 756 (774)
T ss_pred HHH
Confidence 973
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=7.4e-31 Score=313.44 Aligned_cols=257 Identities=25% Similarity=0.400 Sum_probs=216.4
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--- 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--- 943 (1182)
-.+.|+|.+.||.|.+|.||+++.+++++..|+||+......-+.+..|..||+.+.+ |||++.+|++|...
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~-----hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSH-----HPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccC-----CCCcceEEEEEEEecCC
Confidence 4678999999999999999999999999999999998887777788888999988764 56999999998754
Q ss_pred --CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEe
Q 001034 944 --EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVI 1020 (1182)
Q Consensus 944 --e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLi 1020 (1182)
+.++||||||.| +..++++... + ..+.+..+..|++.++.||.+||...+||||||-.|||++. ++.|||+
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~--g--~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~--e~~VKLv 165 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTK--G--NRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTE--NAEVKLV 165 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhc--c--cchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEec--cCcEEEe
Confidence 679999999995 5666666544 2 24899999999999999999999999999999999999994 7889999
Q ss_pred cCCCccccCC---CcccccCCCcccchhhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETD---HLCSYVQSRSYRAPEVILGL-----SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~---~~ss~vGTp~YmAPEVLlg~-----~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||.+..... ..++.+|||.|||||++... .|+..+|+||||++..||.-|.+|+....+...+.+|. ..
T Consensus 166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip--RN 243 (953)
T KOG0587|consen 166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--RN 243 (953)
T ss_pred eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC--CC
Confidence 9999876554 35678999999999999643 48899999999999999999999999888876655552 22
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
|+|.-+ +..+-+.+|.+||..||..|-++||++.++|+|||
T Consensus 244 PPPkLk---------------------------------------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF 284 (953)
T KOG0587|consen 244 PPPKLK---------------------------------------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF 284 (953)
T ss_pred CCcccc---------------------------------------chhhHHHHHHHHHHHHHhhccccCcchhhhccCCc
Confidence 222100 11122578999999999999999999999999999
Q ss_pred CCC
Q 001034 1173 LSH 1175 (1182)
Q Consensus 1173 Fk~ 1175 (1182)
+++
T Consensus 285 i~e 287 (953)
T KOG0587|consen 285 ITE 287 (953)
T ss_pred ccc
Confidence 984
No 378
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=4e-31 Score=323.05 Aligned_cols=253 Identities=27% Similarity=0.394 Sum_probs=192.0
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
...+|+.++.||+||||.||+|+++-+|+.||||.|... ......+.+|++.|.+|+|+ |||++|..+...
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHp------NVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHP------NVVRYYSAWVEST 550 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCc------ceeeeehhhhccC
Confidence 456788999999999999999999999999999999876 55667889999999999776 788887653100
Q ss_pred --------------------------------------------------------------------------------
Q 001034 944 -------------------------------------------------------------------------------- 943 (1182)
Q Consensus 944 -------------------------------------------------------------------------------- 943 (1182)
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence
Q ss_pred --------------------------------------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHH
Q 001034 944 --------------------------------------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQC 985 (1182)
Q Consensus 944 --------------------------------------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QI 985 (1182)
..+||=||||.-.++..+....... -....++++++||
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreI 706 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREI 706 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHH
Confidence 1368888888876665555443211 1356789999999
Q ss_pred HHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC---------------------CCcccccCCCcccch
Q 001034 986 LEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET---------------------DHLCSYVQSRSYRAP 1044 (1182)
Q Consensus 986 LsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~---------------------~~~ss~vGTp~YmAP 1044 (1182)
+.||.|+|++|||||||||.||+++. ++.|||+|||+|+... ...+..+||..|+||
T Consensus 707 lEGLaYIH~~giIHRDLKP~NIFLd~--~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAP 784 (1351)
T KOG1035|consen 707 LEGLAYIHDQGIIHRDLKPRNIFLDS--RNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAP 784 (1351)
T ss_pred HHHHHHHHhCceeeccCCcceeEEcC--CCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecH
Confidence 99999999999999999999999994 7789999999997611 023457899999999
Q ss_pred hhhcCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhc
Q 001034 1045 EVILGL---SYDKKIDIWSLGCILAELCTGNVLFQNDS-PATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQ 1120 (1182)
Q Consensus 1045 EVLlg~---~yS~kSDIWSLGVILYELLTGr~PF~g~d-~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ 1120 (1182)
|++.+. .|+.++|+||||+|||||+. ||...- ...++..+- -|.+|..
T Consensus 785 Ell~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR--~g~iP~~----------------------- 836 (1351)
T KOG1035|consen 785 ELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR--KGSIPEP----------------------- 836 (1351)
T ss_pred HHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc--cCCCCCC-----------------------
Confidence 999765 49999999999999999996 564321 112222221 1112211
Q ss_pred chhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1121 ETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1121 ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
. ......-+.-..+|+.||+.||.+||||.|||++.||.
T Consensus 837 ------------~---~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 837 ------------A---DFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred ------------c---ccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 0 00011123456899999999999999999999999996
No 379
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-32 Score=292.97 Aligned_cols=275 Identities=29% Similarity=0.489 Sum_probs=217.4
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-----CeE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR-----EHL 946 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~-----e~L 946 (1182)
+.||.|+||.||.+.|..+|+.||+|.+.+- -.....+.+|+++|..++|. |++..+++.+-. ..+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHd------NVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHD------NVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccc------cHHHHHHhcCCCCchHHHHH
Confidence 4899999999999999999999999998753 23346778899999998876 788888776643 468
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+|+|+|..+|...+-.-+ .++...++-+++||+++|.|||+.+|.||||||.|+|+++ ++.+||||||+++
T Consensus 133 YV~TELmQSDLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS--NCvLKICDFGLAR 204 (449)
T KOG0664|consen 133 YVLTELMQSDLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS--NCILKICDFGLAR 204 (449)
T ss_pred HHHHHHHHhhhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc--CceEEeccccccc
Confidence 8999999888777665432 3888899999999999999999999999999999999994 8999999999998
Q ss_pred ccCC----CcccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1027 FETD----HLCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1027 ~~~~----~~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
.... +...-+-|..|+|||++.|. .|+.++||||+|||+.|||-.+..|...++.+.+..|+.++|.+..+-+.-
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 6543 23445668899999999987 599999999999999999999999999999999999999999876544332
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCC--CCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLP--MGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~--~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
.-.-. +.+.+. -....|....+..... ....+..+++.+||.+||.+|.+..+++.|+++.+
T Consensus 285 ACEGA----k~H~LR--------~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 285 ACEGA----KNHVLR--------AGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred Hhhhh----HHHhhc--------cCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 11000 111110 0112233333333322 23467899999999999999999999999999854
No 380
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-30 Score=300.70 Aligned_cols=248 Identities=21% Similarity=0.308 Sum_probs=203.8
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCc---E-EEEEEEec----cchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGM---D-VCVKIIKN----NKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD 938 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr---~-VAVKIIkk----~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d 938 (1182)
...+-.+.++||+|+||+||++.-+..+. . ||+|..+. .+.....++.|.++++.++|+ |||++|+
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~------NVVr~yG 228 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHP------NVVRFYG 228 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCC------CEEEEEE
Confidence 34566677999999999999998665322 3 89999884 246677889999999998765 8999999
Q ss_pred EEEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 939 YFYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 939 sFqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
+......++||||+|.| +|.++++.... .++..+...++.+.+.||+|||++++|||||-..|+|++. ++.+
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~--~~~v 301 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSK--KGVV 301 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecC--CCeE
Confidence 99999999999999995 78888887654 2889999999999999999999999999999999999994 5668
Q ss_pred EEecCCCccccCCCc--c-cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCC
Q 001034 1018 KVIDLGSSCFETDHL--C-SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGP 1093 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~--s-s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp 1093 (1182)
||+|||+++...... . ...-+..|+|||.+....|+.++|||||||++||+++ |..||.+....++.++|......
T Consensus 302 KISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r 381 (474)
T KOG0194|consen 302 KISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYR 381 (474)
T ss_pred EeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCcc
Confidence 999999987654211 1 1134678999999999999999999999999999998 88999999999888888421111
Q ss_pred cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1094 IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1094 ~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
. ..| ...+..+..++.+|+..+|++|||+.++.+
T Consensus 382 ~---------------------------------~~~---------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 382 M---------------------------------PIP---------SKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred C---------------------------------CCC---------CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 0 011 133567888999999999999999999876
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=3.1e-29 Score=295.07 Aligned_cols=276 Identities=18% Similarity=0.252 Sum_probs=185.7
Q ss_pred ecCCEEEEEEeccCCceEEEEEEEC----------------CCCcEEEEEEEeccchh---------------hHHHHHH
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDL----------------HTGMDVCVKIIKNNKDF---------------FDQSLDE 915 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk----------------~TGr~VAVKIIkk~k~~---------------~dq~l~E 915 (1182)
-.++|.+.++||+|+||.||++... ..++.||||.+...... .+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3578999999999999999999742 34567999998654211 1123346
Q ss_pred HHHHHHhcCCCCCCCcceEEEEEEEEe--------cCeEEEEEEeccc-ChHHHHhhhccc-----------C-------
Q 001034 916 IKLLKYVNKHDPGDKYHLLRLYDYFYY--------REHLLIVCELLKA-NLYEFHKFNRES-----------G------- 968 (1182)
Q Consensus 916 ikILr~L~h~~~l~HPnIVkL~dsFqd--------~e~LyLVmEyL~G-sLld~Lk~~~~s-----------g------- 968 (1182)
+.++.++.+.. ..+.++++++++|.. ....+|||||+.+ +|.+++...... +
T Consensus 223 ~~~l~~l~~~~-l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 223 AYMCAKIKRNP-IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHhhccc-chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 66677776542 344567777777653 3568999999995 676666532110 0
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC--cc--cccCCCcccch
Q 001034 969 GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH--LC--SYVQSRSYRAP 1044 (1182)
Q Consensus 969 gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~--~s--s~vGTp~YmAP 1044 (1182)
....+.+..++.++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||++...... .. ...+++.|+||
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTV--DGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECC--CCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 0112456778899999999999999999999999999999984 678999999998653321 11 22347899999
Q ss_pred hhhcCCC--------------------CC--chhhHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1045 EVILGLS--------------------YD--KKIDIWSLGCILAELCTGNV-LFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1045 EVLlg~~--------------------yS--~kSDIWSLGVILYELLTGr~-PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
|++.... |+ ...||||+|||+|+|++|.. ||.+...... ......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~---~~~~~~--------- 447 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT---ELRQYD--------- 447 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh---HHhhcc---------
Confidence 9986432 12 24799999999999999985 7754221110 000000
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCC---CCCCCHHHHHcCCCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINP---KKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DP---ekRPTAeELLqHPWFk~~ 1176 (1182)
.....+.. . ....+ ........+..+++||.+||..+| .+|+|+.|+|+||||...
T Consensus 448 ---------~~~~~~r~-~--~~~~~-------~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~~ 506 (507)
T PLN03224 448 ---------NDLNRWRM-Y--KGQKY-------DFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLPE 506 (507)
T ss_pred ---------chHHHHHh-h--cccCC-------CcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCCC
Confidence 00000000 0 00000 011234567899999999999876 789999999999999754
No 382
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=9.2e-31 Score=294.91 Aligned_cols=294 Identities=26% Similarity=0.380 Sum_probs=217.0
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECC---CCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLH---TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~---TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
+.+.|.++.+||.|.|+.||++.+.. ..+.||+|.+..... ...+.+|+.+|..+.... ||+++.+.|...
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~gG~~-----ni~~~~~~~rnn 107 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLGGSD-----NIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhccch-----hhhcchhhhccC
Confidence 34568889999999999999999887 789999999976542 467899999999998765 999999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+++++||||++. ...+++.. ++...++.+++.++.||.++|.+|||||||||.|+|.+. ..+.-.|+||
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~-~t~rg~LvDF 177 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR-RTQRGVLVDF 177 (418)
T ss_pred CeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc-ccCCceEEec
Confidence 999999999985 44444332 677889999999999999999999999999999999996 5677899999
Q ss_pred CCcccc-----------------CC----------------C--------------cccccCCCcccchhhhcCC-CCCc
Q 001034 1023 GSSCFE-----------------TD----------------H--------------LCSYVQSRSYRAPEVILGL-SYDK 1054 (1182)
Q Consensus 1023 GLA~~~-----------------~~----------------~--------------~ss~vGTp~YmAPEVLlg~-~yS~ 1054 (1182)
|+|... .. + .....||++|+|||++... ..+.
T Consensus 178 gLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qtt 257 (418)
T KOG1167|consen 178 GLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTT 257 (418)
T ss_pred hhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCC
Confidence 988510 00 0 0124679999999999764 5788
Q ss_pred hhhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccc--hhhhhhcchhhh--hhcc
Q 001034 1055 KIDIWSLGCILAELCTGNVLFQ-NDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNH--MLYERNQETNRL--EYLI 1129 (1182)
Q Consensus 1055 kSDIWSLGVILYELLTGr~PF~-g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~--~~~er~~ets~L--e~li 1129 (1182)
++||||.|||+.-+++++.||. ..+....+..|+.++|.....-.+........+.+.. ...+.......+ ....
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 9999999999999999999985 4667778888888998754322221111100011000 000000000000 0000
Q ss_pred ccc---cccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1130 PKK---TSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1130 Pk~---~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+.. ..........+..+.+|+.+||..||.+|+||+++|+||||.+.
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 000 11222233446799999999999999999999999999999854
No 383
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=305.68 Aligned_cols=202 Identities=25% Similarity=0.363 Sum_probs=172.3
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec-
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR- 943 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~- 943 (1182)
...-|...+.||+||||.||+++++.+|+.||||.+++. ....+....|+++|++++|+ |||+++++-...
T Consensus 11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~------NIVk~f~iee~~~ 84 (732)
T KOG4250|consen 11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHP------NIVKLFDIEETKF 84 (732)
T ss_pred CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCch------hhhhhcccCCccc
Confidence 345677888999999999999999999999999999874 33457788999999999855 899999875543
Q ss_pred -----CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCc--
Q 001034 944 -----EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC-- 1015 (1182)
Q Consensus 944 -----e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG-- 1015 (1182)
....+|||||.| +|+..+..-.+..| +++.++..++..|+.||.|||++|||||||||.||++-...+|
T Consensus 85 ~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~G---LpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~ 161 (732)
T KOG4250|consen 85 LGLVTRLPVLVMEYCSGGSLRKVLNSPENAYG---LPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQS 161 (732)
T ss_pred cCcccccceEEEeecCCCcHHHHhcCcccccC---CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCce
Confidence 467899999995 67766665443333 9999999999999999999999999999999999999754434
Q ss_pred eEEEecCCCccccCC--CcccccCCCcccchhhhc-CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001034 1016 EVKVIDLGSSCFETD--HLCSYVQSRSYRAPEVIL-GLSYDKKIDIWSLGCILAELCTGNVLFQN 1077 (1182)
Q Consensus 1016 ~IKLiDFGLA~~~~~--~~ss~vGTp~YmAPEVLl-g~~yS~kSDIWSLGVILYELLTGr~PF~g 1077 (1182)
.-||+|||.|+-..+ ...+.+||+.|++||++. .+.|+..+|.|||||++|++.||..||-.
T Consensus 162 IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p 226 (732)
T KOG4250|consen 162 IYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP 226 (732)
T ss_pred EEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence 579999999986554 456889999999999999 58899999999999999999999999954
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-31 Score=286.56 Aligned_cols=262 Identities=26% Similarity=0.345 Sum_probs=202.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.+..+-+..||.|+||+|++..++.+|+.+|||.++.... ...+++.|......-. ..|+||++|+.......
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~-----~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSS-----NCPNIVKFYGALFSEGD 137 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhc-----CCcHHHHHhhhhhcCCc
Confidence 3445556789999999999999999999999999986543 2334555555544433 45699999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
.+|.||+|.-++-.+.++-.... ...+++..+-.|+..++.||.||-. ..||||||||+|||++. .|.|||||||+
T Consensus 138 cWiCMELMd~SlDklYk~vy~vq-~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr--~G~vKLCDFGI 214 (361)
T KOG1006|consen 138 CWICMELMDISLDKLYKRVYSVQ-KSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR--HGDVKLCDFGI 214 (361)
T ss_pred eeeeHHHHhhhHHHHHHHHHHHH-hccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec--CCCEeeecccc
Confidence 99999999988766665433221 2238888888899999999999985 78999999999999994 88899999999
Q ss_pred ccccCCCc--ccccCCCcccchhhhc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhhcCCcchhhh
Q 001034 1025 SCFETDHL--CSYVQSRSYRAPEVIL--GLSYDKKIDIWSLGCILAELCTGNVLFQND-SPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1025 A~~~~~~~--ss~vGTp~YmAPEVLl--g~~yS~kSDIWSLGVILYELLTGr~PF~g~-d~~elLakIv~ilGp~PeemL 1099 (1182)
+-.+.... +.-.|...|||||.+. ...|+.++|+||||++|||+.||+.|+..- +..+++.+++ .|.+|. ++
T Consensus 215 cGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~-l~ 291 (361)
T KOG1006|consen 215 CGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPI-LL 291 (361)
T ss_pred hHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCe-ec
Confidence 87654432 3457889999999995 346999999999999999999999999773 3344444443 222221 00
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
.....-.++..++.||.-||.+|-..||...+|+++||+..
T Consensus 292 -----------------------------------~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 292 -----------------------------------FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRM 332 (361)
T ss_pred -----------------------------------CcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhh
Confidence 00111235788999999999999999999999999999864
No 385
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.8e-29 Score=306.86 Aligned_cols=251 Identities=20% Similarity=0.317 Sum_probs=204.0
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCC-C----cEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHT-G----MDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~T-G----r~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
....++.+.||+|+||.||.+.-... | ..||||.+++. ......++.|..+++.++|+ |||++++++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~Hp------Niv~liGv~ 764 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHP------NIVSLIGVC 764 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCc------ceeeEEEee
Confidence 35678889999999999999985532 2 34899999875 45567788888888887655 999999999
Q ss_pred EecCeEEEEEEecc-cChHHHHhhhcccC-CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEE
Q 001034 941 YYREHLLIVCELLK-ANLYEFHKFNRESG-GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVK 1018 (1182)
Q Consensus 941 qd~e~LyLVmEyL~-GsLld~Lk~~~~sg-gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IK 1018 (1182)
......+||+|||. |+|+.|++..+... ..-.++...+..|+.+|++|+.||+++++|||||-..|+||+. +..+|
T Consensus 765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~--~r~VK 842 (1025)
T KOG1095|consen 765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDE--RRVVK 842 (1025)
T ss_pred cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecc--cCcEE
Confidence 99999999999999 57999998764322 1234899999999999999999999999999999999999994 67899
Q ss_pred EecCCCccccCC-Cccc----ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcC
Q 001034 1019 VIDLGSSCFETD-HLCS----YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1019 LiDFGLA~~~~~-~~ss----~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilG 1092 (1182)
|.|||+|+..-. ..+. ..-+..|||||.+....++.++|||||||+|||+++ |..||.+.++.+++.-.+..
T Consensus 843 IaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g-- 920 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG-- 920 (1025)
T ss_pred EcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC--
Confidence 999999984322 2221 233578999999999999999999999999999999 99999998887776544210
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
+ . ......++..+.++|..|++.+|++||++..|++
T Consensus 921 ---------g-----------------------R---------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 921 ---------G-----------------------R---------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ---------C-----------------------c---------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 0 0 0112345778889999999999999999999987
No 386
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-29 Score=299.20 Aligned_cols=246 Identities=29% Similarity=0.401 Sum_probs=191.7
Q ss_pred EEEeccCCceE-EEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 874 TEYLGSAAFSK-AIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 874 lk~LGkGaFGe-VyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
.+++|.|+-|+ ||++. ..++.||||.+-.. ...-+.+|+..|+... .|||||++|+.-++...+||..|+
T Consensus 514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e--~~~~A~rEi~lL~eSD-----~H~NviRyyc~E~d~qF~YIalEL 584 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGV--YEGREVAVKRLLEE--FFDFAQREIQLLQESD-----EHPNVIRYYCSEQDRQFLYIALEL 584 (903)
T ss_pred HHHcccCCCCcEEEEEe--eCCceehHHHHhhH--hHHHHHHHHHHHHhcc-----CCCceEEEEeeccCCceEEEEehH
Confidence 46789999986 57886 68899999988543 3456678998888764 577999999999999999999999
Q ss_pred cccChHHHHhhhcccCCccc-cCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc---CCCceEEEecCCCcccc
Q 001034 953 LKANLYEFHKFNRESGGEVY-FTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS---YSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 953 L~GsLld~Lk~~~~sggel~-Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs---~~dG~IKLiDFGLA~~~ 1028 (1182)
|..+|.+++.... .+.. ..-...+.++.|++.||++||+.+||||||||.||||.. .+...++|+|||+++..
T Consensus 585 C~~sL~dlie~~~---~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 585 CACSLQDLIESSG---LDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hhhhHHHHHhccc---cchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9999999998641 1111 111445788999999999999999999999999999986 35568999999999865
Q ss_pred CCC------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhhcCCcchhhhhc
Q 001034 1029 TDH------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTG-NVLFQNDSPATLLARVIGIIGPIEQGMLAK 1101 (1182)
Q Consensus 1029 ~~~------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTG-r~PF~g~d~~elLakIv~ilGp~PeemL~~ 1101 (1182)
... .....||-.|+|||++....-..++|||||||++|+.++| ..||...-.. -..|+. |.
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R--~~NIl~--~~-------- 729 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER--QANILT--GN-------- 729 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh--hhhhhc--Cc--------
Confidence 432 3455789999999999998888899999999999999996 8999653321 122210 00
Q ss_pred ccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCC
Q 001034 1102 GRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLS 1174 (1182)
Q Consensus 1102 ~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk 1174 (1182)
..+-...+....++.+||.+||.++|..||+|.++|.||||=
T Consensus 730 -------------------------------~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 730 -------------------------------YTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred -------------------------------cceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 001111111223899999999999999999999999999993
No 387
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.95 E-value=4e-28 Score=301.48 Aligned_cols=185 Identities=22% Similarity=0.311 Sum_probs=150.2
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
|...+.||+|+||.||+|+++.++..||||.+...... ...|+.++++++ |||||+++++|......|+||
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~------HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQ------HPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCC------CCCcceEEEEEEcCCCCEEEE
Confidence 44556899999999999999999999999998754322 224566666664 569999999999999999999
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHH---hcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLH---GLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLH---S~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
||+++ +|.+++.. +++..+..|+.||+.||.||| +.+|+||||||+||+++. .+..++. ||...
T Consensus 763 Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~--~~~~~~~-~~~~~ 830 (968)
T PLN00113 763 EYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG--KDEPHLR-LSLPG 830 (968)
T ss_pred eCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC--CCceEEE-ecccc
Confidence 99984 67776641 678889999999999999999 679999999999999985 3444544 55443
Q ss_pred ccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001034 1027 FETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN 1077 (1182)
Q Consensus 1027 ~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g 1077 (1182)
.... .....+++.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 831 ~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 831 LLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred cccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 2211 1234678999999999999999999999999999999999999953
No 388
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-28 Score=279.68 Aligned_cols=244 Identities=21% Similarity=0.287 Sum_probs=208.9
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
..+..+||-|-||.||.+..+.-.-.||||.++.+.+..+.++.|..+++.+.|+ |+|+|+++|...-.+|||+
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHp------NLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP------NLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCc------cHHHHhhhhccCCCeEEEE
Confidence 4455789999999999999998888999999999999999999999999999765 8999999999999999999
Q ss_pred Eecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
|||. |+|+++++.+.... ++...+..++.||..|++||..+++|||||-..|+|+. .+..||+.|||++++..
T Consensus 343 EfM~yGNLLdYLRecnr~e----v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg--EnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSE----VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHIVKVADFGLSRLMT 416 (1157)
T ss_pred ecccCccHHHHHHHhchhh----cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc--ccceEEeeccchhhhhc
Confidence 9998 89999999876432 77778889999999999999999999999999999998 47789999999999876
Q ss_pred CCccc-cc---CCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccc
Q 001034 1030 DHLCS-YV---QSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRD 1104 (1182)
Q Consensus 1030 ~~~ss-~v---GTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~ 1104 (1182)
...++ .. .++-|.|||-+....++.++|||+|||+|||+.| |-.||.+-+...++..+- ++..
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLE------------kgyR 484 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLE------------KGYR 484 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHh------------cccc
Confidence 55443 22 3677999999999999999999999999999998 999999988766665441 1100
Q ss_pred cchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1105 TYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1105 s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
-.....+++...+|++.|++|.|..||++.|+-+
T Consensus 485 -------------------------------M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 485 -------------------------------MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred -------------------------------ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 0112356788999999999999999999998743
No 389
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1e-26 Score=226.93 Aligned_cols=208 Identities=40% Similarity=0.643 Sum_probs=180.3
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecc
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLK 954 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~ 954 (1182)
||.|++|.||++....+++.+++|++..... ....+.+|+..++.+.+. +|+++++++......++|||++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~------~i~~~~~~~~~~~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHP------NIVKLYGVFEDENHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCC------CeeeEeeeeecCCeEEEEEecCC
Confidence 6899999999999988899999999987654 256788899999998763 89999999999999999999999
Q ss_pred -cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCC--
Q 001034 955 -ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDH-- 1031 (1182)
Q Consensus 955 -GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~-- 1031 (1182)
++|..++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ..+.++|+|||.+......
T Consensus 75 ~~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~-~~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 75 GGSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS-DNGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC-CCCcEEEecCCceEEccCCcc
Confidence 57777766432 12788899999999999999999999999999999999994 1567999999998765544
Q ss_pred -cccccCCCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhh
Q 001034 1032 -LCSYVQSRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYF 1109 (1182)
Q Consensus 1032 -~ss~vGTp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F 1109 (1182)
.....+...|++||.+... .++.+.|+|+||+++|+|
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------- 187 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------- 187 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------
Confidence 3445678899999999887 888999999999999999
Q ss_pred cccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 001034 1110 TKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHP 1171 (1182)
Q Consensus 1110 ~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHP 1171 (1182)
..+.++|.+||..+|.+||++.++++|+
T Consensus 188 ----------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ----------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ----------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3467899999999999999999999986
No 390
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.95 E-value=6.8e-28 Score=278.37 Aligned_cols=256 Identities=20% Similarity=0.262 Sum_probs=204.8
Q ss_pred ceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 865 SVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 865 ~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
+....+..+.++||+|-||+|.+|.- ..+..||+|+++... .....+..|+++|.+|+|+ ||++|+++|..
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhP------NIveLvGVC~~ 606 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHP------NIVELLGVCVQ 606 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCC------CeeEEEeeeec
Confidence 33456778889999999999999983 557999999998653 3457889999999999655 89999999999
Q ss_pred cCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
++.+|+|||||. |+|.+|+.....+. .......+|+.||+.|++||.+.++|||||.+.|+|++ +++++||+|
T Consensus 607 DePicmI~EYmEnGDLnqFl~aheapt----~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~--~e~~iKiad 680 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDLNQFLSAHELPT----AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD--GEFTIKIAD 680 (807)
T ss_pred CCchHHHHHHHhcCcHHHHHHhccCcc----cccchhHHHHHHHHHHHHHHHhhchhhccccccceeec--CcccEEecC
Confidence 999999999999 78888887664321 34445667999999999999999999999999999999 588899999
Q ss_pred CCCccccCCCc-----ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1022 LGSSCFETDHL-----CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT--GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1022 FGLA~~~~~~~-----ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT--Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
||.++-+-... ...+-+..|||||.++-++++.++|+|+||++|||+++ ...||...+.++.....-.++...
T Consensus 681 fgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~ 760 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQ 760 (807)
T ss_pred cccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCC
Confidence 99998432222 23355789999999999999999999999999999865 678998877766655543222211
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
+. .....+.+.++..+.+||.+|+.+|-++||+.++|-.
T Consensus 761 ~~------------------------------------~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~ 799 (807)
T KOG1094|consen 761 GR------------------------------------QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHL 799 (807)
T ss_pred Cc------------------------------------ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence 11 1111233456788999999999999999999999855
No 391
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.8e-28 Score=279.26 Aligned_cols=242 Identities=22% Similarity=0.334 Sum_probs=196.3
Q ss_pred EEEEEEeccCCceEEEEEEECC----CCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLH----TGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE 944 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~----TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e 944 (1182)
..+.++||.|-||.||.+.-.. ..-.||||..+.+ ....+.++.|..+++.+.| ||||+|++++.. .
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdH------phIikLIGv~~e-~ 463 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDH------PHIIKLIGVCVE-Q 463 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCC------cchhheeeeeec-c
Confidence 3445789999999999997432 2334899999874 3557789999999988855 599999999864 6
Q ss_pred eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 945 HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 945 ~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..+||||+++ |.|..+++.+... ++......|++||+.||.|||+.++|||||-..|||+.+ .. -|||.|||
T Consensus 464 P~WivmEL~~~GELr~yLq~nk~s-----L~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS-p~-CVKLaDFG 536 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNKDS-----LPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS-PQ-CVKLADFG 536 (974)
T ss_pred ceeEEEecccchhHHHHHHhcccc-----chHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC-cc-eeeecccc
Confidence 7999999999 7899999887654 888899999999999999999999999999999999996 33 39999999
Q ss_pred CccccCCCccc----ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1024 SSCFETDHLCS----YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1024 LA~~~~~~~ss----~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
+++...+..+. ..-+.-|||||.+.-..++.++|||.|||.|||+|. |..||.+-.+.+++..|-
T Consensus 537 LSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE---------- 606 (974)
T KOG4257|consen 537 LSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE---------- 606 (974)
T ss_pred hhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec----------
Confidence 99987665332 233667999999999999999999999999999987 999998865544432220
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
++ ...+..+++++.|..|+.+|+.++|.+||++.+|..
T Consensus 607 --nG-------------------------------eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 607 --NG-------------------------------ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred --CC-------------------------------CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 11 112345678899999999999999999999988653
No 392
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-28 Score=280.69 Aligned_cols=198 Identities=30% Similarity=0.514 Sum_probs=176.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHH---------HHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQ---------SLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq---------~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
..|..++.||.|+||.|++|.++.+...|+||.|.+.+...+. +-.|+.||..++.+ .|+||++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~---sH~NIlKlLdf 637 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH---SHENILKLLDF 637 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc---Cccchhhhhhe
Confidence 4599999999999999999999999999999999887633332 34699999999977 58899999999
Q ss_pred EEecCeEEEEEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 940 FYYREHLLIVCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
|++..++||+||.-.. +|++++.+... +++.++..|++||+.|+++||++||||||||-+||+++ ++|-+
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp~------m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd--~~g~~ 709 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKPR------MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD--SNGFV 709 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccCc------cchHHHHHHHHHHHhccccccccCceecccccccEEEe--cCCeE
Confidence 9999999999998763 68888887654 89999999999999999999999999999999999999 48889
Q ss_pred EEecCCCccccC-CCcccccCCCcccchhhhcCCCC-CchhhHHHHHHHHHHHHhCCCCCCC
Q 001034 1018 KVIDLGSSCFET-DHLCSYVQSRSYRAPEVILGLSY-DKKIDIWSLGCILAELCTGNVLFQN 1077 (1182)
Q Consensus 1018 KLiDFGLA~~~~-~~~ss~vGTp~YmAPEVLlg~~y-S~kSDIWSLGVILYELLTGr~PF~g 1077 (1182)
||+|||.+.... .+...++||..|.|||++.|.+| +..-|||+||++||.++....||++
T Consensus 710 klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred EEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999999987544 45667899999999999999886 5788999999999999999999975
No 393
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=276.93 Aligned_cols=247 Identities=22% Similarity=0.339 Sum_probs=202.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECC-CC--cEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLH-TG--MDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY 942 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~-TG--r~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd 942 (1182)
..+..+.++||.|.||.|+++.... +| -.||||.++... .....+++|+.++..|.|+ |+++||++..+
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~------hliRLyGvVl~ 182 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHP------HLIRLYGVVLD 182 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCc------ceeEEeeeecc
Confidence 3556777899999999999997653 33 358999998654 3567899999999888765 89999999887
Q ss_pred cCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..+.+|||++. |+|++-+.... ...|....+..|+.||+.|+.||.++++|||||-..|||+-+ .-.|||+|
T Consensus 183 -qp~mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllas--prtVKI~D 255 (1039)
T KOG0199|consen 183 -QPAMMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLAS--PRTVKICD 255 (1039)
T ss_pred -chhhHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecc--cceeeeec
Confidence 77889999999 67888777521 223888899999999999999999999999999999999985 55699999
Q ss_pred CCCccccCCCccccc------CCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCc
Q 001034 1022 LGSSCFETDHLCSYV------QSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPI 1094 (1182)
Q Consensus 1022 FGLA~~~~~~~ss~v------GTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~ 1094 (1182)
||+.+-+......++ -...|+|||.+....++.++|+|++||+||||++ |..||.+-....++.+|-
T Consensus 256 FGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD------ 329 (1039)
T KOG0199|consen 256 FGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID------ 329 (1039)
T ss_pred ccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc------
Confidence 999987655433322 2567999999999999999999999999999998 889999999888887761
Q ss_pred chhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcC
Q 001034 1095 EQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKH 1170 (1182)
Q Consensus 1095 PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqH 1170 (1182)
......+..-+++.+.+++..|+..+|.+|||+..|.+.
T Consensus 330 -------------------------------------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 330 -------------------------------------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred -------------------------------------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 001112334568899999999999999999999988643
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-27 Score=249.08 Aligned_cols=214 Identities=27% Similarity=0.417 Sum_probs=177.5
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++...-+..||+|++|.|=+.++..+|...|+|.++..- ....+.++|+.+..+. ...|++|++|+.+.....
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~-----~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRT-----VDCPFTVHFYGALFREGD 119 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccC-----CCCCeEEEeehhhhcccc
Confidence 455566778999999999999999999999999997542 3334455555554443 356799999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
++|.||.|..+|-.|.+.--..++. +++..+-+|+..++.||.|||+ ..+||||+||+||||+. .|++||||||.
T Consensus 120 vwIcME~M~tSldkfy~~v~~~g~~--ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~--~GqVKiCDFGI 195 (282)
T KOG0984|consen 120 VWICMELMDTSLDKFYRKVLKKGGT--IPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINY--DGQVKICDFGI 195 (282)
T ss_pred EEEeHHHhhhhHHHHHHHHHhcCCc--CchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEcc--CCcEEEccccc
Confidence 9999999999888877766555443 8999999999999999999996 58999999999999995 88999999999
Q ss_pred ccccCCCcc--cccCCCcccchhhhcC----CCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhh
Q 001034 1025 SCFETDHLC--SYVQSRSYRAPEVILG----LSYDKKIDIWSLGCILAELCTGNVLFQN-DSPATLLARVIGI 1090 (1182)
Q Consensus 1025 A~~~~~~~s--s~vGTp~YmAPEVLlg----~~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~elLakIv~i 1090 (1182)
+-.+.+... ...|...|||||.+.. ..|+.++||||||++++||.+++.||.+ .++.+++.+++..
T Consensus 196 sG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 196 SGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred ceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 976655432 2567889999999853 4799999999999999999999999976 6788888888744
No 395
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.6e-25 Score=225.59 Aligned_cols=205 Identities=35% Similarity=0.502 Sum_probs=173.0
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
|.+.+.||.|++|.||++....+++.+|+|.+..... ....+..|+..++.+.+ ++++++++++......++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~------~~i~~~~~~~~~~~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH------PNIVKLYGVFEDPEPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC------CChhhheeeeecCCceEE
Confidence 5678899999999999999988899999999986543 45677788888888854 489999999998899999
Q ss_pred EEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 949 VCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 949 VmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|+|++.+ +|.+++...... +++..+..++.+++.+|.+||+++++|+||+|.||+++. .+.++|+|||++..
T Consensus 75 v~e~~~~~~L~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~--~~~~~l~d~g~~~~ 147 (225)
T smart00221 75 VMEYCEGGDLFDYLRKKGGK-----LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGM--DGLVKLADFGLARF 147 (225)
T ss_pred EEeccCCCCHHHHHHhcccC-----CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEeeCceeeE
Confidence 9999997 788777654321 678889999999999999999999999999999999995 57899999999876
Q ss_pred cCCCc----ccccCCCcccchhhh-cCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHH-HHHHHHH
Q 001034 1028 ETDHL----CSYVQSRSYRAPEVI-LGLSYDKKIDIWSLGCILAELCTGNVLFQN-DSPA-TLLARVI 1088 (1182)
Q Consensus 1028 ~~~~~----ss~vGTp~YmAPEVL-lg~~yS~kSDIWSLGVILYELLTGr~PF~g-~d~~-elLakIv 1088 (1182)
..... ....++..|++||.+ ....++.++|+|+||+++|+|++|+.||.. .+.. .+...|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 55432 456778889999999 667788899999999999999999999977 4444 4555543
No 396
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=3.1e-27 Score=289.94 Aligned_cols=195 Identities=19% Similarity=0.221 Sum_probs=145.2
Q ss_pred ceEEEEEEE-------EecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCC
Q 001034 932 HLLRLYDYF-------YYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKP 1004 (1182)
Q Consensus 932 nIVkL~dsF-------qd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKP 1004 (1182)
||+.++++| .....++++||++.++|.+++.... ..+++..++.|++||+.||.|||++|||||||||
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP 108 (793)
T PLN00181 34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP 108 (793)
T ss_pred HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence 677777776 2335688899999999999986422 2388999999999999999999999999999999
Q ss_pred ccEEEcc-----------------CCCceEEEecCCCccccCC-------------------CcccccCCCcccchhhhc
Q 001034 1005 ENILVKS-----------------YSRCEVKVIDLGSSCFETD-------------------HLCSYVQSRSYRAPEVIL 1048 (1182)
Q Consensus 1005 eNILIDs-----------------~~dG~IKLiDFGLA~~~~~-------------------~~ss~vGTp~YmAPEVLl 1048 (1182)
+||||+. ...+.+||+|||+++.... .....++|+.|+|||++.
T Consensus 109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 188 (793)
T PLN00181 109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN 188 (793)
T ss_pred hhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence 9999963 2345677788887753211 001246789999999999
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhc
Q 001034 1049 GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYL 1128 (1182)
Q Consensus 1049 g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~l 1128 (1182)
+..|+.++||||||||||||++|.+||.... ..+..+....
T Consensus 189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~------------------------------------- 229 (793)
T PLN00181 189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV------------------------------------- 229 (793)
T ss_pred cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-------------------------------------
Confidence 9999999999999999999999998874321 1111110000
Q ss_pred cccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1129 IPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1129 iPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.|. ........+.+++.+||+++|.+||++.|||+||||...
T Consensus 230 ~~~------~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 230 LPP------QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred cCh------hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 000 000112456789999999999999999999999999864
No 397
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-26 Score=273.85 Aligned_cols=245 Identities=19% Similarity=0.293 Sum_probs=205.0
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCc---EEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGM---DVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr---~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
....|.++||.|-||+|++++.+..|+ .||||.++.. ......++.|..|+-++. ||||++|.++....
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd------HPNIIrLEGVVTks 702 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD------HPNIIRLEGVVTKS 702 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC------CCcEEEEEEEEecC
Confidence 456788999999999999999887764 4999999864 345667888888888775 55999999999999
Q ss_pred CeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
..+.||+|||.. .|-.|++.+. + .|+..++..+++.|+.|+.||-++++|||||-..|||+++ +-.+|++||
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~D---G--qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNs--nLvCKVsDF 775 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQND---G--QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNS--NLVCKVSDF 775 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcC---C--ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeecc--ceEEEeccc
Confidence 999999999994 5656655443 2 2888999999999999999999999999999999999995 778999999
Q ss_pred CCccccCCCc---ccccC---CCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcc
Q 001034 1023 GSSCFETDHL---CSYVQ---SRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIE 1095 (1182)
Q Consensus 1023 GLA~~~~~~~---ss~vG---Tp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~P 1095 (1182)
|+++.+.+.. ++..| +..|.|||.+...+++.++||||+|++|||.++ |..||..-++.+++..|.+.+.=
T Consensus 776 GLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRL-- 853 (996)
T KOG0196|consen 776 GLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRL-- 853 (996)
T ss_pred cceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCC--
Confidence 9999765433 22222 578999999999999999999999999999886 99999999999999988532221
Q ss_pred hhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1096 QGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1096 eemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
+....++..|.+|+..|+++|-..||++.+|+.
T Consensus 854 -----------------------------------------PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 854 -----------------------------------------PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred -----------------------------------------CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 112345788999999999999999999999876
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3.5e-27 Score=275.83 Aligned_cols=257 Identities=26% Similarity=0.361 Sum_probs=212.9
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
-.++|+++..+|.|+||.||+++++.+++..|+|+++... +.+.-+..|+-+++.++|+ |||.+++.+.....
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~------nivay~gsylr~dk 86 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHP------NIVAYFGSYLRRDK 86 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCc------ChHHHHhhhhhhcC
Confidence 3578999999999999999999999999999999998764 4455666788887777554 89999999999999
Q ss_pred EEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
++|+|||++|+ |.+... ...++++.++...+++.+.+|.|||++|-+|||||-.|||+.. .|.+||.|||.
T Consensus 87 lwicMEycgggslQdiy~------~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd--~gDvklaDfgv 158 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYH------VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTD--EGDVKLADFGV 158 (829)
T ss_pred cEEEEEecCCCcccceee------ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecc--cCceeecccCc
Confidence 99999999965 444332 2334999999999999999999999999999999999999994 77899999999
Q ss_pred ccccCC---CcccccCCCcccchhhhc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1025 SCFETD---HLCSYVQSRSYRAPEVIL---GLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~---~~ss~vGTp~YmAPEVLl---g~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
+..... ...++.||+.|||||+.. ...|...||+|++|+...|+---.+|.....+...+..+.+...++|.
T Consensus 159 saqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~-- 236 (829)
T KOG0576|consen 159 SAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT-- 236 (829)
T ss_pred hhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc--
Confidence 865443 345789999999999974 567999999999999999999999988777777777666544443332
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
... -..-++-|-+|++.+|..+|++|||++.+|+|||.+..
T Consensus 237 ---------------------------------lkD----k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 237 ---------------------------------LKD----KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred ---------------------------------ccC----CccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 000 01124678899999999999999999999999998765
No 399
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=5.5e-25 Score=264.26 Aligned_cols=251 Identities=22% Similarity=0.359 Sum_probs=196.8
Q ss_pred CCEEEEEEeccCCceEEEEEEEC----C---CCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDL----H---TGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDY 939 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk----~---TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ds 939 (1182)
.+..+.+.||.|+||.|+++.-. . ....||||.++... .....+..|+.+++.+. .|+||+.+.+.
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-----~H~niv~llG~ 370 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-----KHPNIVNLLGA 370 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-----CCcchhhheee
Confidence 33456679999999999999743 1 24579999987543 44667888999999886 45699999999
Q ss_pred EEecCeEEEEEEecc-cChHHHHhhhc---ccCCc-------cccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEE
Q 001034 940 FYYREHLLIVCELLK-ANLYEFHKFNR---ESGGE-------VYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL 1008 (1182)
Q Consensus 940 Fqd~e~LyLVmEyL~-GsLld~Lk~~~---~sgge-------l~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNIL 1008 (1182)
+.....+++|+||+. |+|+.+++.++ ..... ..++......+++||+.|++||++..+|||||-..|||
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL 450 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL 450 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence 999999999999998 78999998877 11111 23888999999999999999999999999999999999
Q ss_pred EccCCCceEEEecCCCccccCCCccc----cc--CCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC-H
Q 001034 1009 VKSYSRCEVKVIDLGSSCFETDHLCS----YV--QSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDS-P 1080 (1182)
Q Consensus 1009 IDs~~dG~IKLiDFGLA~~~~~~~ss----~v--GTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d-~ 1080 (1182)
+.. +..+||+|||+++........ .. -+..|||||.+....|+.++||||+|++||||++ |..||.+-. .
T Consensus 451 i~~--~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 451 ITK--NKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred ecC--CCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 994 567999999999854332211 11 2456999999999999999999999999999998 889998733 3
Q ss_pred HHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCC
Q 001034 1081 ATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKK 1160 (1182)
Q Consensus 1081 ~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPek 1160 (1182)
.+++..+. .+.. ......++.++.++++.|++.+|.+
T Consensus 529 ~~l~~~l~------------~G~r-------------------------------~~~P~~c~~eiY~iM~~CW~~~p~~ 565 (609)
T KOG0200|consen 529 EELLEFLK------------EGNR-------------------------------MEQPEHCSDEIYDLMKSCWNADPED 565 (609)
T ss_pred HHHHHHHh------------cCCC-------------------------------CCCCCCCCHHHHHHHHHHhCCCccc
Confidence 33333221 1110 0112234788999999999999999
Q ss_pred CCCHHHHHc
Q 001034 1161 RPSASDALK 1169 (1182)
Q Consensus 1161 RPTAeELLq 1169 (1182)
||+..++.+
T Consensus 566 RP~F~~~~~ 574 (609)
T KOG0200|consen 566 RPTFSECVE 574 (609)
T ss_pred CCCHHHHHH
Confidence 999999865
No 400
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=6.6e-26 Score=258.38 Aligned_cols=267 Identities=21% Similarity=0.247 Sum_probs=189.9
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC---
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE--- 944 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e--- 944 (1182)
....+++++||+|.||.||+|+ -+++.||||++.... .+.+++|..|..... ..|+||+++++.-....
T Consensus 209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~--kqs~~~Ek~Iy~lp~----m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQE--KQSFQNEKNIYSLPG----MKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhh--ccCceeEEEecCHHH--HHHHHhHHHHHhccC----ccchhHHHhhchhccCCccc
Confidence 3456788899999999999997 466999999997543 467778888877663 35889999998766554
Q ss_pred -eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh---------cCccccccCCccEEEccCC
Q 001034 945 -HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG---------LGLIHCDLKPENILVKSYS 1013 (1182)
Q Consensus 945 -~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS---------~GIIHRDIKPeNILIDs~~ 1013 (1182)
.++||++|-+ |+|.++++.+. +++....+|+.-+++||+|||+ ..|+|||||..||||..
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~-- 351 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKN-- 351 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEcc--
Confidence 7899999988 89999998764 8999999999999999999995 35999999999999994
Q ss_pred CceEEEecCCCccccCC-----CcccccCCCcccchhhhcCCC-CC-----chhhHHHHHHHHHHHHhCCCCCC-CCCHH
Q 001034 1014 RCEVKVIDLGSSCFETD-----HLCSYVQSRSYRAPEVILGLS-YD-----KKIDIWSLGCILAELCTGNVLFQ-NDSPA 1081 (1182)
Q Consensus 1014 dG~IKLiDFGLA~~~~~-----~~ss~vGTp~YmAPEVLlg~~-yS-----~kSDIWSLGVILYELLTGr~PF~-g~d~~ 1081 (1182)
++..-|+|||+|..... .....+||.+|||||++.+.- +. .++||||+|.+||||++...-+. +..+.
T Consensus 352 DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~ 431 (534)
T KOG3653|consen 352 DLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE 431 (534)
T ss_pred CCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc
Confidence 78899999999975432 233479999999999997642 22 57899999999999999765543 21110
Q ss_pred HHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC
Q 001034 1082 TLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR 1161 (1182)
Q Consensus 1082 elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR 1161 (1182)
...-.-+.+|..|. .+..+....-+...|......... ..-..+++.|..|+..||+.|
T Consensus 432 -Yqlpfe~evG~hPt-------------------~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeAR 490 (534)
T KOG3653|consen 432 -YQLPFEAEVGNHPT-------------------LEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEAR 490 (534)
T ss_pred -ccCchhHHhcCCCC-------------------HHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhh
Confidence 00000011121111 001111111111122221111111 234678999999999999999
Q ss_pred CCHHH------HHcCCC
Q 001034 1162 PSASD------ALKHPW 1172 (1182)
Q Consensus 1162 PTAeE------LLqHPW 1172 (1182)
+||.= .|.|+|
T Consensus 491 LTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 491 LTAGCVEERMAELMMLW 507 (534)
T ss_pred hhhHHHHHHHHHHhccC
Confidence 99863 455665
No 401
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.1e-26 Score=248.91 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=197.9
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE-EEEecCe
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD-YFYYREH 945 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d-sFqd~e~ 945 (1182)
+.+.|.|.+.||.|.||.+.+|.++.++..+++|.+++.......+.+|...--.|.+ |.||+.-|+ .|+....
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~-----H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSP-----HQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeecc-----chhhhHHHHHHhhcCce
Confidence 5688999999999999999999999999999999999887777888888766555554 448888776 5777788
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
++++|||++ |+|..-+.-. | +-+.....++.|+++||.|+|+.++||||||.+||||-......|||||||+
T Consensus 97 YvF~qE~aP~gdL~snv~~~----G---igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 97 YVFVQEFAPRGDLRSNVEAA----G---IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred EEEeeccCccchhhhhcCcc----c---ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccc
Confidence 999999999 6676554432 1 7788899999999999999999999999999999999765667999999999
Q ss_pred ccccCCCcccccCCCcccchhhhcCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhcCCcchhh
Q 001034 1025 SCFETDHLCSYVQSRSYRAPEVILGL-----SYDKKIDIWSLGCILAELCTGNVLFQNDSPA-TLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~~~ss~vGTp~YmAPEVLlg~-----~yS~kSDIWSLGVILYELLTGr~PF~g~d~~-elLakIv~ilGp~Peem 1098 (1182)
.+..+......--+..|.|||+.... ...+.+|+|.||+|+|.+|||++||+..... ..+.+.++
T Consensus 170 t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~--------- 240 (378)
T KOG1345|consen 170 TRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ--------- 240 (378)
T ss_pred ccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHH---------
Confidence 88766555444556779999988643 2567899999999999999999999742211 01111111
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC---CCHHHHHcCCC
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR---PSASDALKHPW 1172 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR---PTAeELLqHPW 1172 (1182)
++..+...+...+...++.+..+.++-|..+|++| .++......-|
T Consensus 241 ----------------------------w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w 289 (378)
T KOG1345|consen 241 ----------------------------WLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW 289 (378)
T ss_pred ----------------------------HhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence 11112223344556678899999999999999999 45544444333
No 402
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=7e-25 Score=217.90 Aligned_cols=167 Identities=26% Similarity=0.358 Sum_probs=125.8
Q ss_pred cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccCCCccc
Q 001034 955 ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCS 1034 (1182)
Q Consensus 955 GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ss 1034 (1182)
|+|.+++..... .+++..++.|+.||+.||.|||+.+ ||+|||++. ++.+|+ ||++.......
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~--~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTW--DGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcC--ccceee--ccceEeecccc--
Confidence 567777765322 3899999999999999999999998 999999984 677888 99987654432
Q ss_pred ccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhhcCCcchhhhhcccccchhhcccc
Q 001034 1035 YVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPA-TLLARVIGIIGPIEQGMLAKGRDTYKYFTKNH 1113 (1182)
Q Consensus 1035 ~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~-elLakIv~ilGp~PeemL~~~k~s~k~F~k~~ 1113 (1182)
..+|+.|+|||++.+..++.++|||||||++|+|++|++||...... ..+..++....+..
T Consensus 64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------------ 125 (176)
T smart00750 64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD------------------ 125 (176)
T ss_pred CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC------------------
Confidence 36899999999999999999999999999999999999999764432 22222221100000
Q ss_pred hhhhhhcchhhhhhccccccccccCCCCCc--HHHHHHHHHhcccCCCCCCCHHHHHcCCCCCC
Q 001034 1114 MLYERNQETNRLEYLIPKKTSLRHRLPMGD--QGFIDFVAHLLEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1114 ~~~er~~ets~Le~liPk~~sL~~~l~~~S--eeL~DLIrkMLq~DPekRPTAeELLqHPWFk~ 1175 (1182)
+... ......+ ..+.+||.+||..+|.+||++.++++|+|+..
T Consensus 126 ----------------~~~~---~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 126 ----------------PRDR---SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ----------------cccc---ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0000 0000111 36899999999999999999999999999753
No 403
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.92 E-value=1.2e-22 Score=205.03 Aligned_cols=258 Identities=31% Similarity=0.464 Sum_probs=197.8
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccch----hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD----FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~----~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
|.+.+.||.|+|+.||++.+. ..+++|.+..... ....+.+|..+++.+.++. +|+++++.+......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~-----~i~~~~~~~~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP-----NIVKLYDFFQDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCc-----ceeeEEEEEecCCEE
Confidence 788999999999999999986 7899999976542 3567788888888887663 799999999877888
Q ss_pred EEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCc-eEEEecCCC
Q 001034 947 LIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC-EVKVIDLGS 1024 (1182)
Q Consensus 947 yLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG-~IKLiDFGL 1024 (1182)
+++++++.+. +..++...... ..+....+..++.|++.+|.|+|+.+++||||||+||+++. .+ .++++|||.
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~--~~~~~~l~dfg~ 148 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR--DGRVVKLIDFGL 148 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC--CCCeEEEeccCc
Confidence 9999999965 44344332210 23888899999999999999999999999999999999995 44 699999999
Q ss_pred ccccCC---------CcccccCCCcccchhhhcC---CCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHH
Q 001034 1025 SCFETD---------HLCSYVQSRSYRAPEVILG---LSYDKKIDIWSLGCILAELCTGNVLFQNDSP----ATLLARVI 1088 (1182)
Q Consensus 1025 A~~~~~---------~~ss~vGTp~YmAPEVLlg---~~yS~kSDIWSLGVILYELLTGr~PF~g~d~----~elLakIv 1088 (1182)
+..... .....+++..|+|||.+.+ ..++...|+||+|++++++++|..||..... ......+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 864332 2356789999999999988 5789999999999999999999999877653 23333322
Q ss_pred hhcCC-cchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHH
Q 001034 1089 GIIGP-IEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDA 1167 (1182)
Q Consensus 1089 ~ilGp-~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeEL 1167 (1182)
....+ ... +...... ......+.+++.+|+..+|..|.++...
T Consensus 229 ~~~~~~~~~---------------------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 272 (384)
T COG0515 229 ELPTPSLAS---------------------------------PLSPSNP---ELISKAASDLLKKLLAKDPKNRLSSSSD 272 (384)
T ss_pred hcCCccccc---------------------------------ccCcccc---chhhHHHHHHHHHHHhcCchhcCCHHHH
Confidence 11111 000 0000000 1223678899999999999999999999
Q ss_pred HcCCCCCCCC
Q 001034 1168 LKHPWLSHPY 1177 (1182)
Q Consensus 1168 LqHPWFk~~~ 1177 (1182)
..++|+....
T Consensus 273 ~~~~~~~~~~ 282 (384)
T COG0515 273 LSHDLLAHLK 282 (384)
T ss_pred hhchHhhCcc
Confidence 9997776543
No 404
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.91 E-value=2.3e-24 Score=255.88 Aligned_cols=241 Identities=22% Similarity=0.300 Sum_probs=192.8
Q ss_pred EEEEEeccCCceEEEEEEECCCCc----EEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 872 HVTEYLGSAAFSKAIQAHDLHTGM----DVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 872 eIlk~LGkGaFGeVyLAkDk~TGr----~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+..++||.|+||+||++.....|+ +||||++.... .....++.|.-++..+. ||||++|++++....
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masld------Hpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLD------HPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCC------CchHHHHhhhcccch-
Confidence 345789999999999998765554 58889887654 33567778888777775 559999999998766
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
+-||++||+ |.|+++++..+.. +-......|.+||++||.|||.++++||||-..|||+.. -.++||+|||+
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~-----igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVks--P~hvkitdfgl 844 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDN-----IGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKS--PNHVKITDFGL 844 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhcc-----ccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecC--CCeEEEEecch
Confidence 889999999 6899999987654 667788999999999999999999999999999999995 55799999999
Q ss_pred ccccCCCcc-----cccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhcCCcchhh
Q 001034 1025 SCFETDHLC-----SYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGIIGPIEQGM 1098 (1182)
Q Consensus 1025 A~~~~~~~s-----s~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~ilGp~Peem 1098 (1182)
++....... ...-.+-|||-|.+....|+.++|||||||++|||+| |..|+.+-...++-..+
T Consensus 845 a~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll----------- 913 (1177)
T KOG1025|consen 845 AKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL----------- 913 (1177)
T ss_pred hhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-----------
Confidence 987554322 1223567999999999999999999999999999998 99999887655432221
Q ss_pred hhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1099 LAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1099 L~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
..+ .. ....+..+.++.-++.+||..|+..||+++++..
T Consensus 914 -e~g------------------------------eR-LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 914 -EKG------------------------------ER-LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred -hcc------------------------------cc-CCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 000 00 1234566788999999999999999999999764
No 405
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=238.29 Aligned_cols=196 Identities=24% Similarity=0.343 Sum_probs=158.8
Q ss_pred cceeeeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 858 NFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 858 ~f~V~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
-.+.-....++.+.++.+.||+|.||+||++. .-|+.||||++.... .....+|.+|.+.+-. .|+||+.++
T Consensus 200 GlplLVQRTiarqI~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~srd--E~SWfrEtEIYqTvmL----RHENILgFI 271 (513)
T KOG2052|consen 200 GLPLLVQRTIARQIVLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSSRD--ERSWFRETEIYQTVML----RHENILGFI 271 (513)
T ss_pred CchhHhHHhhhheeEEEEEecCccccceeecc--ccCCceEEEEecccc--hhhhhhHHHHHHHHHh----ccchhhhhh
Confidence 34556667788999999999999999999996 678999999997543 2345566666665432 355999998
Q ss_pred EEEEec----CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-----c---CccccccCC
Q 001034 938 DYFYYR----EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-----L---GLIHCDLKP 1004 (1182)
Q Consensus 938 dsFqd~----e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-----~---GIIHRDIKP 1004 (1182)
+.-..+ ..++||++|-+ |+|++|+..+. ++......++.-++.||++||- + .|.|||||.
T Consensus 272 aaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 272 AADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hccccCCCceEEEEEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 875544 46999999998 89999998743 7888999999999999999994 2 499999999
Q ss_pred ccEEEccCCCceEEEecCCCccccCC-------CcccccCCCcccchhhhcCCC------CCchhhHHHHHHHHHHHHh
Q 001034 1005 ENILVKSYSRCEVKVIDLGSSCFETD-------HLCSYVQSRSYRAPEVILGLS------YDKKIDIWSLGCILAELCT 1070 (1182)
Q Consensus 1005 eNILIDs~~dG~IKLiDFGLA~~~~~-------~~ss~vGTp~YmAPEVLlg~~------yS~kSDIWSLGVILYELLT 1070 (1182)
.|||+.+ ++..-|.|+|+|..... ..+..+||.+|||||++...- --..+||||||+++||++.
T Consensus 345 KNILVKk--n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar 421 (513)
T KOG2052|consen 345 KNILVKK--NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR 421 (513)
T ss_pred ccEEEcc--CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999994 78899999999965433 356789999999999995431 1256899999999999976
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=5.6e-22 Score=219.87 Aligned_cols=205 Identities=27% Similarity=0.315 Sum_probs=169.6
Q ss_pred CEEEEEEeccCCceEEEEEEECCCC-cEEEEEEEeccchh-hHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE-EecCeE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTG-MDVCVKIIKNNKDF-FDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF-YYREHL 946 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TG-r~VAVKIIkk~k~~-~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF-qd~e~L 946 (1182)
+|.+.+.||.|+||.||+|.+..++ ..+|+|+....... ......|+.++..+... ....++..+++.+ ....+-
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~--~~~~~~~~~~~~G~~~~~~~ 96 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKK--NGPSHFPKLLDHGRSTEDFN 96 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhh--cCCCCCCEEEEeccCCCcee
Confidence 8999999999999999999988775 68999998765322 12567788888888751 1123789999998 477889
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC-C--ceEEEecCC
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS-R--CEVKVIDLG 1023 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~-d--G~IKLiDFG 1023 (1182)
||||+.++.+|.++...... ..|+...+..++.|++.||++||+.|++||||||.|+++.... . ..+.|+|||
T Consensus 97 ~iVM~l~G~sL~dl~~~~~~----~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 97 FIVMSLLGPSLEDLRKRNPP----GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEEeccCccHHHHHHhCCC----CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99999999999998766541 2399999999999999999999999999999999999998532 1 469999999
Q ss_pred Ccc--ccC-C---------C-cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Q 001034 1024 SSC--FET-D---------H-LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP 1080 (1182)
Q Consensus 1024 LA~--~~~-~---------~-~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~ 1080 (1182)
+++ ... . . ...+.||..|+++.+..+...+.+.|+||++.++.+|+.|..||.+...
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~ 242 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEM 242 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence 998 210 0 1 1235699999999999999999999999999999999999999976553
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=6.1e-22 Score=211.98 Aligned_cols=213 Identities=21% Similarity=0.357 Sum_probs=181.0
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+..+.|.++++||.|+||.+|++....+|..||||+-++... ..+...|.++.+.|++.. .|..+..++....+
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-hpqL~yEskvY~iL~~g~-----GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-HPQLLYESKVYRILQGGV-----GIPHIRHYGTEKDY 85 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-CcchhHHHHHHHHhccCC-----CCchhhhhcccccc
Confidence 456899999999999999999999999999999998876543 356778899999988764 67888888888999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCc-eEEEecCCC
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC-EVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG-~IKLiDFGL 1024 (1182)
-.+||++++.+|.+++..+... |+..++.-++-|++.-|+|+|..++|||||||+|+|+.-..++ .+.|||||+
T Consensus 86 nvlVMdLLGPsLEdLfnfC~R~-----ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGL 160 (341)
T KOG1163|consen 86 NVLVMDLLGPSLEDLFNFCSRR-----FTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGL 160 (341)
T ss_pred ceeeeeccCccHHHHHHHHhhh-----hhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccc
Confidence 9999999999999999888653 9999999999999999999999999999999999999754333 689999999
Q ss_pred ccccCCC----------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHh
Q 001034 1025 SCFETDH----------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSP---ATLLARVIG 1089 (1182)
Q Consensus 1025 A~~~~~~----------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~---~elLakIv~ 1089 (1182)
|+...+. .....||..|.+--...+...+..-|+-|+|.+|.++.-|..||++-.+ .+-+.+|..
T Consensus 161 aKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E 238 (341)
T KOG1163|consen 161 AKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE 238 (341)
T ss_pred hhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH
Confidence 9753322 2346789999999999999999999999999999999999999998543 344555543
No 408
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=6.2e-23 Score=246.31 Aligned_cols=266 Identities=20% Similarity=0.239 Sum_probs=190.6
Q ss_pred CCE-EEEEEeccCCceEEEEEEECCCCcEEEEEEEecc--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRY-HVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drY-eIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
..| ....++|.|++|.|+.+........++.|.++.. ....... ....+...+.....+.||+++..+..++....
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~-~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~ 395 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERK-YNYNITSEFCIGSSLSHPNIIETLDIVQEIDG 395 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHH-HhhhhhhheeecccccCCchhhhHHHHhhccc
Confidence 444 3456899999999999988777777776655421 1101111 11114444444455678888887777666655
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
.+-+|||++++|+.++.... .++...+..++.||+.||.|||.+||.||||||+|+++.. .|.+||+|||.+
T Consensus 396 ~~~~mE~~~~Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~--~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTE--NGILKIIDFGAA 467 (601)
T ss_pred chhhhhcccHHHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEec--CCceEEeecCcc
Confidence 55559999997777776542 2788889999999999999999999999999999999995 678999999988
Q ss_pred cccCC-------CcccccCCCcccchhhhcCCCCC-chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhhcCCcch
Q 001034 1026 CFETD-------HLCSYVQSRSYRAPEVILGLSYD-KKIDIWSLGCILAELCTGNVLFQNDSPATLLA-RVIGIIGPIEQ 1096 (1182)
Q Consensus 1026 ~~~~~-------~~ss~vGTp~YmAPEVLlg~~yS-~kSDIWSLGVILYELLTGr~PF~g~d~~elLa-kIv~ilGp~Pe 1096 (1182)
..... .....+|+..|+|||++.+..|. ...||||.|++++.|.+|+.||.-....+... .+
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~--------- 538 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTN--------- 538 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhh---------
Confidence 54322 23457889999999999999988 46899999999999999999995433221110 00
Q ss_pred hhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1097 GMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1097 emL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
..... ..............+...+.+|.+||++||.+|.|+.+||+.+||+..
T Consensus 539 --------------~~~~~-------------~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 539 --------------NYSDQ-------------RNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred --------------ccccc-------------cccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 00000 000011111222335678899999999999999999999999999987
Q ss_pred CCC
Q 001034 1177 YEP 1179 (1182)
Q Consensus 1177 ~eP 1179 (1182)
..|
T Consensus 592 ~~c 594 (601)
T KOG0590|consen 592 ECC 594 (601)
T ss_pred ceE
Confidence 655
No 409
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.86 E-value=4.6e-22 Score=242.32 Aligned_cols=220 Identities=24% Similarity=0.352 Sum_probs=167.6
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
....+|..++.|..|+||-||+++++.+.+.+|+|+ .++.. ||+.+... ...|++|
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l----------ilRnilt~--a~npfvv----------- 135 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL----------ILRNILTF--AGNPFVV----------- 135 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhhcc-cccch----------hhhccccc--cCCccee-----------
Confidence 446789999999999999999999999999999954 33221 12211111 0112222
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|+-..+++... . ++. +++.|++|||+-||+|||+||+|+||.. -|++|++|||++
T Consensus 136 ---------gDc~tllk~~g----~--lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~--mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 136 ---------GDCATLLKNIG----P--LPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITS--MGHIKLTDFGLS 190 (1205)
T ss_pred ---------chhhhhcccCC----C--Ccc--------hhhHHhHhhccCCeecCCCCCCcceeee--cccccccchhhh
Confidence 33333333221 1 221 2378999999999999999999999995 788999999987
Q ss_pred cccCCC------------------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 001034 1026 CFETDH------------------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARV 1087 (1182)
Q Consensus 1026 ~~~~~~------------------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakI 1087 (1182)
+..... ....||||.|+|||++..+.|++.+|||+||+|+|+.|.|+.||.++++++++.++
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v 270 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 270 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh
Confidence 531110 23468999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCC---CCH
Q 001034 1088 IGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKR---PSA 1164 (1182)
Q Consensus 1088 v~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekR---PTA 1164 (1182)
+......|++. .....++.++|.++|+.+|..| ..+
T Consensus 271 isd~i~wpE~d-----------------------------------------ea~p~Ea~dli~~LL~qnp~~Rlgt~ga 309 (1205)
T KOG0606|consen 271 ISDDIEWPEED-----------------------------------------EALPPEAQDLIEQLLRQNPLCRLGTGGA 309 (1205)
T ss_pred hhhhccccccC-----------------------------------------cCCCHHHHHHHHHHHHhChHhhcccchh
Confidence 76555544431 1235789999999999999999 567
Q ss_pred HHHHcCCCCCC
Q 001034 1165 SDALKHPWLSH 1175 (1182)
Q Consensus 1165 eELLqHPWFk~ 1175 (1182)
.++.+|+||+.
T Consensus 310 ~evk~h~ff~~ 320 (1205)
T KOG0606|consen 310 LEVKQHGFFQL 320 (1205)
T ss_pred hhhhhccceee
Confidence 88999999975
No 410
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-22 Score=238.97 Aligned_cols=236 Identities=23% Similarity=0.326 Sum_probs=189.1
Q ss_pred eccCCceEEEEEEE---CCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 877 LGSAAFSKAIQAHD---LHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 877 LGkGaFGeVyLAkD---k~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
+|.|+||.|+++.. ...+..||||++++.. ........|..++..++. ||++|++...|+....+++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~-----~~f~v~lhyafqt~~kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHN-----TPFLVKLHYAFQTDGKLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccC-----CCceeeeeeeeccccchhHhh
Confidence 79999999999864 3567889999987642 111255567777777763 459999999999999999999
Q ss_pred EecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 951 ELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 951 EyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
+++.|+ +..-+.. ...+.+...+.+...++.|++++|+.+|+|||+|++||+++ .+|+|++.|||+++..-
T Consensus 77 d~~rgg~lft~l~~------~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld--~~Ghi~~tdfglske~v 148 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSK------EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL--LEGHIKLTDFGLSKEAV 148 (612)
T ss_pred hhcccchhhhcccc------CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec--ccCccccCCchhhhHhH
Confidence 999974 4333222 22388888999999999999999999999999999999999 48899999999998644
Q ss_pred CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhh
Q 001034 1030 DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYF 1109 (1182)
Q Consensus 1030 ~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F 1109 (1182)
..... |||..|||||++. ....++||||||+++|+|++|..||.. ++..+|+..--..|.
T Consensus 149 ~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~------------- 208 (612)
T KOG0603|consen 149 KEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR------------- 208 (612)
T ss_pred hhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch-------------
Confidence 43333 9999999999998 678899999999999999999999987 556666532222222
Q ss_pred cccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH-----HHHHcCCCCCCC
Q 001034 1110 TKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA-----SDALKHPWLSHP 1176 (1182)
Q Consensus 1110 ~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA-----eELLqHPWFk~~ 1176 (1182)
..+..+.++++.|+..+|..|.-+ .|+++|+||+..
T Consensus 209 -------------------------------~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i 249 (612)
T KOG0603|consen 209 -------------------------------ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI 249 (612)
T ss_pred -------------------------------hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence 225678899999999999999765 799999999753
No 411
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.85 E-value=5.1e-21 Score=214.68 Aligned_cols=250 Identities=20% Similarity=0.224 Sum_probs=189.9
Q ss_pred CCEEEEEEeccCCceEEEEEEECCC-----CcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHT-----GMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~T-----Gr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
.|+++..++-+|.||+||.+..... .+.|-+|.++... .+...++.|--.|..+ .|||+..+.++..
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~------sH~nll~V~~V~i 357 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA------SHPNLLSVLGVSI 357 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC------cCCCccceeEEEe
Confidence 4566677889999999999965432 2335556554432 2334444454444444 4669999988766
Q ss_pred ec-CeEEEEEEecc-cChHHHHhhhccc--CCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 942 YR-EHLLIVCELLK-ANLYEFHKFNRES--GGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 942 d~-e~LyLVmEyL~-GsLld~Lk~~~~s--ggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
.. ...++++.+++ |+|..|+..++.. .+...++..++..++.||+.|+.|||+.|+||.||-..|++|+. .-++
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd--~LqV 435 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDD--QLQV 435 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehh--heeE
Confidence 54 66788889988 8999999866522 22234777788889999999999999999999999999999994 6789
Q ss_pred EEecCCCccccCCCccccc-----CCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc
Q 001034 1018 KVIDLGSSCFETDHLCSYV-----QSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGII 1091 (1182)
Q Consensus 1018 KLiDFGLA~~~~~~~ss~v-----GTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~il 1091 (1182)
||+|=.+++.+-...+... .+..||+||.+....|+.++|+|||||+||||+| |+.|+..-++.++..-+.
T Consensus 436 kltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylk--- 512 (563)
T KOG1024|consen 436 KLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLK--- 512 (563)
T ss_pred EeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHh---
Confidence 9999999886544333322 3667999999999999999999999999999998 999999888888765552
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHc
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLq 1169 (1182)
.+++ . ...-+++.++..++.-|+..+|++||+.+|+..
T Consensus 513 ---------dGyR----------------------l---------aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 513 ---------DGYR----------------------L---------AQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ---------ccce----------------------e---------cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 1111 0 112256889999999999999999999999864
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=3.9e-21 Score=212.67 Aligned_cols=212 Identities=19% Similarity=0.299 Sum_probs=182.9
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++.-.|+|.++||+|+||.++++.+..++++||||.-.... ...+...|.+..+.|.... .|...|++-+...+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-~APQLrdEYr~YKlL~g~~-----GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-EAPQLRDEYRTYKLLGGTE-----GIPQVYYFGQEGKY 98 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccC-CcchHHHHHHHHHHHcCCC-----CCCceeeeccccch
Confidence 34557999999999999999999999999999999765433 3456778899999888654 89999999999999
Q ss_pred EEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC---CceEEEecC
Q 001034 946 LLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS---RCEVKVIDL 1022 (1182)
Q Consensus 946 LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~---dG~IKLiDF 1022 (1182)
-.||||+++.+|.+++..+... |+...+.-++.|++.-|+|+|++.+|+|||||+|+||...+ ...|.|+||
T Consensus 99 NiLVidLLGPSLEDLFD~CgR~-----FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDF 173 (449)
T KOG1165|consen 99 NILVIDLLGPSLEDLFDLCGRR-----FSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDF 173 (449)
T ss_pred hhhhhhhhCcCHHHHHHHhcCc-----ccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEec
Confidence 9999999999999999988643 99999999999999999999999999999999999997532 346999999
Q ss_pred CCccccCCC----------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHH
Q 001034 1023 GSSCFETDH----------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN---DSPATLLARVI 1088 (1182)
Q Consensus 1023 GLA~~~~~~----------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g---~d~~elLakIv 1088 (1182)
|+|+...++ ..+..||..||+--..+|...+.+-|+-|||-+++++|-|.+||.+ .+..+-+++|-
T Consensus 174 GmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIG 252 (449)
T KOG1165|consen 174 GMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIG 252 (449)
T ss_pred cchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhc
Confidence 999864433 2356789999999999999999999999999999999999999987 55566666663
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.83 E-value=3.3e-20 Score=211.39 Aligned_cols=163 Identities=20% Similarity=0.176 Sum_probs=125.5
Q ss_pred eCceecCCEEEEEEeccCCceEEEEEEECC-CCcEEEEEEEecc------chhhHHHHHHHHHHHHhcCCCCCCCcceE-
Q 001034 863 LNSVIAGRYHVTEYLGSAAFSKAIQAHDLH-TGMDVCVKIIKNN------KDFFDQSLDEIKLLKYVNKHDPGDKYHLL- 934 (1182)
Q Consensus 863 ig~iL~drYeIlk~LGkGaFGeVyLAkDk~-TGr~VAVKIIkk~------k~~~dq~l~EikILr~L~h~~~l~HPnIV- 934 (1182)
....+.++|.+.+.||+|+||+||+|+++. +++.||||++... ......+.+|+++|+.+.|+ +++
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~------~iv~ 85 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGI------GVVP 85 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCC------CCCc
Confidence 345678999999999999999999998876 7888899987532 12245578999999999766 566
Q ss_pred EEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCcccccc-CCccEEEccCC
Q 001034 935 RLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDL-KPENILVKSYS 1013 (1182)
Q Consensus 935 kL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDI-KPeNILIDs~~ 1013 (1182)
.+++. ...||||||+.|..+.... . .. ...++.|++.||.|||++||+|||| ||+|||++.
T Consensus 86 ~l~~~----~~~~LVmE~~~G~~L~~~~----~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~-- 147 (365)
T PRK09188 86 QLLAT----GKDGLVRGWTEGVPLHLAR----P-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGP-- 147 (365)
T ss_pred EEEEc----CCcEEEEEccCCCCHHHhC----c-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcC--
Confidence 45442 4689999999986554221 1 11 1457889999999999999999999 999999974
Q ss_pred CceEEEecCCCccccCCC-----------cccccCCCcccchhhhcC
Q 001034 1014 RCEVKVIDLGSSCFETDH-----------LCSYVQSRSYRAPEVILG 1049 (1182)
Q Consensus 1014 dG~IKLiDFGLA~~~~~~-----------~ss~vGTp~YmAPEVLlg 1049 (1182)
++.+||+|||+|+..... .....+++.|+|||.+..
T Consensus 148 ~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 148 DGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 567999999999754322 134567888999999853
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.80 E-value=3.1e-19 Score=197.67 Aligned_cols=241 Identities=21% Similarity=0.277 Sum_probs=151.1
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHHHHHHHHHHHHhcCCC-CC---CCcceEEEEEEEEe
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQSLDEIKLLKYVNKHD-PG---DKYHLLRLYDYFYY 942 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq~l~EikILr~L~h~~-~l---~HPnIVkL~dsFqd 942 (1182)
+.....||.|+|+.||.|.+..|++.+|+|++.... ...+...+|......+.... +. .|-.++..++....
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 556688999999999999999999999999986543 22333333333332222100 00 01134444443332
Q ss_pred c-----------------CeEEEEEEecccChHHHHhhhcccCCc-cccCHHHHHHHHHHHHHHHHHHHhcCccccccCC
Q 001034 943 R-----------------EHLLIVCELLKANLYEFHKFNRESGGE-VYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKP 1004 (1182)
Q Consensus 943 ~-----------------e~LyLVmEyL~GsLld~Lk~~~~sgge-l~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKP 1004 (1182)
. -..+++|+.+.++|..++......... ..+.......+..|+++.+++||..|++|+||+|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~ 173 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP 173 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence 1 135789999999888876643222111 1133334455668999999999999999999999
Q ss_pred ccEEEccCCCceEEEecCCCccccCCCcccccCCCcccchhhhcC--------CCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001034 1005 ENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILG--------LSYDKKIDIWSLGCILAELCTGNVLFQ 1076 (1182)
Q Consensus 1005 eNILIDs~~dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg--------~~yS~kSDIWSLGVILYELLTGr~PF~ 1076 (1182)
+|+|++. +|.++|+||+.....+........+..|.+||.... ..++.+.|.|+||+++|.|+||..||.
T Consensus 174 ~nfll~~--~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~ 251 (288)
T PF14531_consen 174 ENFLLDQ--DGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFG 251 (288)
T ss_dssp GGEEE-T--TS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STC
T ss_pred eeEEEcC--CCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCC
Confidence 9999995 788999999887665554443445678999998743 257889999999999999999999996
Q ss_pred CCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhccc
Q 001034 1077 NDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEI 1156 (1182)
Q Consensus 1077 g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~ 1156 (1182)
...+... . .. ....+. .+++.++.||+.||++
T Consensus 252 ~~~~~~~---------~-----------~~---------------------------~f~~C~-~~Pe~v~~LI~~lL~~ 283 (288)
T PF14531_consen 252 LSSPEAD---------P-----------EW---------------------------DFSRCR-DMPEPVQFLIRGLLQR 283 (288)
T ss_dssp CCGGGST---------S-----------GG---------------------------GGTTSS----HHHHHHHHHHT-S
T ss_pred CCCcccc---------c-----------cc---------------------------cchhcC-CcCHHHHHHHHHHccC
Confidence 5432100 0 00 112233 6678999999999999
Q ss_pred CCCCC
Q 001034 1157 NPKKR 1161 (1182)
Q Consensus 1157 DPekR 1161 (1182)
+|.+|
T Consensus 284 ~~~~R 288 (288)
T PF14531_consen 284 NPEDR 288 (288)
T ss_dssp SGGGS
T ss_pred CcccC
Confidence 99988
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=3.5e-20 Score=226.09 Aligned_cols=244 Identities=26% Similarity=0.390 Sum_probs=173.3
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.|...+.||.+.|=+|.+|++ ..|. |+||++-+.. .....+.+.++-++.. ...+||++.+.-........|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~----l~~~pn~lPfqk~~~t~kAAy 97 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-REGL-VVVKVFVKQDPTISLRPFKQRLEEIKFA----LMKAPNCLPFQKVLVTDKAAY 97 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-CCce-EEEEEEeccCCCCCchHHHHHHHHHHHH----hhcCCcccchHHHHHhhHHHH
Confidence 688889999999999999986 4555 9999997653 1122333333333311 124568888777766677889
Q ss_pred EEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 948 IVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 948 LVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||-+|+..+|++-+..+. ++...+.+.|+.||+.||.-+|..||+|||||.+||||++ -.=+.|+||..-+.
T Consensus 98 lvRqyvkhnLyDRlSTRP------FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS--WNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 98 LVRQYVKHNLYDRLSTRP------FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS--WNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHhhhhhhhhccch------HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee--echhhhhcccccCC
Confidence 999999999999887654 3888889999999999999999999999999999999995 33488999987542
Q ss_pred --cCC--C--cccccC----CCcccchhhhcCC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 001034 1028 --ETD--H--LCSYVQ----SRSYRAPEVILGL----------S-YDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLA 1085 (1182)
Q Consensus 1028 --~~~--~--~ss~vG----Tp~YmAPEVLlg~----------~-yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLa 1085 (1182)
+.. + ...+.. -.+|+|||.|... + ..++.||||+||+++||++ |++||. +.
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~-------LS 242 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT-------LS 242 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc-------HH
Confidence 111 1 111222 3469999998542 2 5688999999999999998 899993 22
Q ss_pred HHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 001034 1086 RVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSAS 1165 (1182)
Q Consensus 1086 kIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAe 1165 (1182)
++.+-. .+ .. .....+-.. ..+..++.||..|++.||.+|.+|+
T Consensus 243 QL~aYr---------~~-----------~~----~~~e~~Le~------------Ied~~~Rnlil~Mi~rdPs~RlSAe 286 (1431)
T KOG1240|consen 243 QLLAYR---------SG-----------NA----DDPEQLLEK------------IEDVSLRNLILSMIQRDPSKRLSAE 286 (1431)
T ss_pred HHHhHh---------cc-----------Cc----cCHHHHHHh------------CcCccHHHHHHHHHccCchhccCHH
Confidence 221000 00 00 000001011 1245789999999999999999999
Q ss_pred HHHcC
Q 001034 1166 DALKH 1170 (1182)
Q Consensus 1166 ELLqH 1170 (1182)
+.|+-
T Consensus 287 dyL~~ 291 (1431)
T KOG1240|consen 287 DYLQK 291 (1431)
T ss_pred HHHHh
Confidence 99974
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.76 E-value=1.9e-18 Score=179.78 Aligned_cols=139 Identities=15% Similarity=0.218 Sum_probs=103.5
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchh---------------------------hHHHHHHHHHHHHhcCCC
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF---------------------------FDQSLDEIKLLKYVNKHD 926 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~---------------------------~dq~l~EikILr~L~h~~ 926 (1182)
...||.|+||.||+|.+. +|+.||||+++..... ......|++++..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999986 8999999999764210 012234888999987642
Q ss_pred CCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHH-HhcCccccccCCc
Q 001034 927 PGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFL-HGLGLIHCDLKPE 1005 (1182)
Q Consensus 927 ~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYL-HS~GIIHRDIKPe 1005 (1182)
. .+|+++. .. ..+|||||++|+.+....... ..++...+..++.||+.+|.+| |+.||+||||||+
T Consensus 81 v-~~p~~~~------~~-~~~iVmE~i~g~~l~~~~~~~-----~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~ 147 (190)
T cd05147 81 I-PCPEPIL------LK-SHVLVMEFIGDDGWAAPRLKD-----APLSESKARELYLQVIQIMRILYQDCRLVHADLSEY 147 (190)
T ss_pred C-CCCcEEE------ec-CCEEEEEEeCCCCCcchhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 1 2334331 12 238999999986433221111 1378889999999999999999 7999999999999
Q ss_pred cEEEccCCCceEEEecCCCccccC
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
|||++ ++.++|+|||+|....
T Consensus 148 NIli~---~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 148 NLLYH---DGKLYIIDVSQSVEHD 168 (190)
T ss_pred HEEEE---CCcEEEEEccccccCC
Confidence 99998 3679999999997543
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.76 E-value=2.3e-18 Score=185.76 Aligned_cols=177 Identities=15% Similarity=0.223 Sum_probs=130.3
Q ss_pred ceeeeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc----hhhHH------HHHHHHHHHHhcCCCCC
Q 001034 859 FHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK----DFFDQ------SLDEIKLLKYVNKHDPG 928 (1182)
Q Consensus 859 f~V~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k----~~~dq------~l~EikILr~L~h~~~l 928 (1182)
|.-...+.+.++|+++++||.|+||.||++.+ ++..+|+|+++... ..... ..+|+..+.++.++
T Consensus 21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~--- 95 (232)
T PRK10359 21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE--- 95 (232)
T ss_pred HHHHHHHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC---
Confidence 44555677899999999999999999999765 46789999997542 11112 45777888888766
Q ss_pred CCcceEEEEEEEEec--------CeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccc
Q 001034 929 DKYHLLRLYDYFYYR--------EHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIH 999 (1182)
Q Consensus 929 ~HPnIVkL~dsFqd~--------e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIH 999 (1182)
+|..+.+++... ...+|||||++|. |.++.. +++ ..+.+|+.+|..||..|++|
T Consensus 96 ---GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~gi~H 158 (232)
T PRK10359 96 ---GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQHGMVS 158 (232)
T ss_pred ---CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHcCCcc
Confidence 677777765543 4589999999984 544311 222 24569999999999999999
Q ss_pred cccCCccEEEccCCCceEEEecCCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHH
Q 001034 1000 CDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELC 1069 (1182)
Q Consensus 1000 RDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELL 1069 (1182)
|||||.|||++. .| ++|+|||.......... ..-+++...|+.++|+||||+++..+.
T Consensus 159 ~Dikp~Nili~~--~g-i~liDfg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 159 GDPHKGNFIVSK--NG-LRIIDLSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCCChHHEEEeC--CC-EEEEECCCcccccchhh---------HHHHHHHhHhcccccccceeEeehHHH
Confidence 999999999985 45 99999998754322111 111445556778999999999986554
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.74 E-value=2e-17 Score=170.60 Aligned_cols=140 Identities=19% Similarity=0.192 Sum_probs=102.5
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchh---------------------------hHHHHHHHHHHHHhcCCC
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF---------------------------FDQSLDEIKLLKYVNKHD 926 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~---------------------------~dq~l~EikILr~L~h~~ 926 (1182)
.+.||.|+||.||+|.+. +|+.||||+++..... ......|...+.++.+.
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~- 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA- 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 468999999999999987 8999999999864210 11124677888888765
Q ss_pred CCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCc
Q 001034 927 PGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPE 1005 (1182)
Q Consensus 927 ~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPe 1005 (1182)
++.....+.. ...||||||++|.......... ..++...+..++.|++.+|.+||. .||+||||||+
T Consensus 80 -----~i~~p~~~~~--~~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~ 147 (190)
T cd05145 80 -----GVPVPEPILL--KKNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEY 147 (190)
T ss_pred -----CCCCceEEEe--cCCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChh
Confidence 2322211111 1348999999986322111111 126778889999999999999999 99999999999
Q ss_pred cEEEccCCCceEEEecCCCccccCC
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|||++ ++.++|+|||++.....
T Consensus 148 NIll~---~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 148 NILYH---DGKPYIIDVSQAVELDH 169 (190)
T ss_pred hEEEE---CCCEEEEEcccceecCC
Confidence 99998 46799999999976543
No 419
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1.1e-17 Score=207.23 Aligned_cols=196 Identities=17% Similarity=0.284 Sum_probs=157.3
Q ss_pred eecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+-...|.|-+.||.|+||+||+|.+.. |+.||+|+-+....| .+.-..+++.+|+ . ..-+.|+.+...+...+.
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk-~--~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLK-P--QMLPSIMHISSAHVFQNA 768 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhc-h--hhhcchHHHHHHHccCCc
Confidence 345689999999999999999999866 999999998876644 2333445555555 1 112256677776777778
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccC-----CCceEEE
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSY-----SRCEVKV 1019 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~-----~dG~IKL 1019 (1182)
-+||++|.+ |+|++++...+ .+++..+.+|+.|++..|+.||.++|||+||||+|+||... ..--++|
T Consensus 769 S~lv~ey~~~Gtlld~~N~~~------~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTNK------VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred ceeeeeccccccHHHhhccCC------CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEE
Confidence 889999999 78999987333 38888999999999999999999999999999999999631 2335999
Q ss_pred ecCCCcccc---C--CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Q 001034 1020 IDLGSSCFE---T--DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNV 1073 (1182)
Q Consensus 1020 iDFGLA~~~---~--~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~ 1073 (1182)
||||.+-.. . ......++|-.+-.+|+..|.+|++.+|.|.|+.+++-||.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999988532 1 23445678889999999999999999999999999999999974
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=5.8e-17 Score=173.26 Aligned_cols=183 Identities=17% Similarity=0.105 Sum_probs=138.7
Q ss_pred EEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhH-----HHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 872 HVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFD-----QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 872 eIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~d-----q~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.+...|++|+||+|+++.. .+..++.+.+.....+.. .+.+|+++|++|.+.. ++++++++ ...
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~-----~vP~ll~~----~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLP-----RTPRLLHW----DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCC-----CCCEEEEE----cCE
Confidence 4567899999999998864 778888888877665544 5678999999997643 67777775 457
Q ss_pred EEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCcccccc-CCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDL-KPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDI-KPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
|++|+|+.|..+.... .. ....++.|++.+|.+||++||+|||| ||.|||++. ++.++|+|||++
T Consensus 74 ~lvmeyI~G~~L~~~~-----------~~-~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~--~g~i~LIDFG~A 139 (218)
T PRK12274 74 HLDRSYLAGAAMYQRP-----------PR-GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQE--DGSPAVIDFQLA 139 (218)
T ss_pred EEEEeeecCccHHhhh-----------hh-hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcC--CCCEEEEECCCc
Confidence 9999999986542211 00 11347789999999999999999999 799999984 677999999999
Q ss_pred cccCCCcc----------------cccCCCcccchhhhcCC-CCC-chhhHHHHHHHHHHHHhCCCCCCCCC
Q 001034 1026 CFETDHLC----------------SYVQSRSYRAPEVILGL-SYD-KKIDIWSLGCILAELCTGNVLFQNDS 1079 (1182)
Q Consensus 1026 ~~~~~~~s----------------s~vGTp~YmAPEVLlg~-~yS-~kSDIWSLGVILYELLTGr~PF~g~d 1079 (1182)
........ ....++.|++|+...-. ..+ ...+|++.|+.+|.++|+..|+.++.
T Consensus 140 ~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 140 VRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred eecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 75432211 11247888999876433 344 67899999999999999999886654
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=2.5e-17 Score=185.66 Aligned_cols=189 Identities=23% Similarity=0.293 Sum_probs=141.5
Q ss_pred CCCcceEEEEEEEEec---------------------------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHH
Q 001034 928 GDKYHLLRLYDYFYYR---------------------------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQS 980 (1182)
Q Consensus 928 l~HPnIVkL~dsFqd~---------------------------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~ 980 (1182)
..|||||+++..|.+. ..+|+||..++.+|..++-.+. .+....+-
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC-------CchHHHHH
Confidence 4699999999988653 3589999999999999987653 55667788
Q ss_pred HHHHHHHHHHHHHhcCccccccCCccEEEccCCCc--eEEEecCCCccccCC---------CcccccCCCcccchhhhcC
Q 001034 981 ITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRC--EVKVIDLGSSCFETD---------HLCSYVQSRSYRAPEVILG 1049 (1182)
Q Consensus 981 Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG--~IKLiDFGLA~~~~~---------~~ss~vGTp~YmAPEVLlg 1049 (1182)
++.|++.|+.|||++||.|||+|.+||||.-+.++ .+.|+|||++--... ..-..-|.-.-||||++..
T Consensus 346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 99999999999999999999999999999654443 688999998743221 1223456778999999975
Q ss_pred CC------CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchh
Q 001034 1050 LS------YDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETN 1123 (1182)
Q Consensus 1050 ~~------yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets 1123 (1182)
.+ --.++|.|+.|.+.||++.-..||+......+ . .+.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L----------------~----------------~r~---- 469 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL----------------D----------------TRT---- 469 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee----------------c----------------hhh----
Confidence 43 12579999999999999999999987322110 0 000
Q ss_pred hhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHH
Q 001034 1124 RLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSAS 1165 (1182)
Q Consensus 1124 ~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAe 1165 (1182)
++ ...+......+++.+++|+..+|+.||.+|+++.
T Consensus 470 ---Yq---e~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 470 ---YQ---ESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred ---hh---hhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 00 0112223345678999999999999999999864
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.67 E-value=6.5e-16 Score=164.32 Aligned_cols=138 Identities=20% Similarity=0.226 Sum_probs=106.7
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEecc-chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecC---eEE-EE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN-KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYRE---HLL-IV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~-k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e---~Ly-LV 949 (1182)
+.||+|+|+.||. +..++.. +||++... ......+.+|+.+++.+.+. ...||||+++|+++.... .++ +|
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~-~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRR-LIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred ceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhcc-CCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 5899999999995 6667665 79998754 22346789999999999764 357899999999999874 434 78
Q ss_pred EEecc---cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHH-HHHHhcCccccccCCccEEEccC--CCceEEEecCC
Q 001034 950 CELLK---ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEAL-QFLHGLGLIHCDLKPENILVKSY--SRCEVKVIDLG 1023 (1182)
Q Consensus 950 mEyL~---GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsAL-eYLHS~GIIHRDIKPeNILIDs~--~dG~IKLiDFG 1023 (1182)
|||.+ ++|.+++.... +++. ..++.|++.++ .|||+++|+||||||+|||++.. +...++|+||+
T Consensus 84 ~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred ecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 99954 58888885421 4444 35678888777 99999999999999999999853 23479999954
Q ss_pred Cc
Q 001034 1024 SS 1025 (1182)
Q Consensus 1024 LA 1025 (1182)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.65 E-value=4.4e-16 Score=167.65 Aligned_cols=144 Identities=18% Similarity=0.145 Sum_probs=107.9
Q ss_pred EEEEEEeccCCceEEEEEE-ECCCCcEEEEEEEeccch-------------------------hhHHHHHHHHHHHHhcC
Q 001034 871 YHVTEYLGSAAFSKAIQAH-DLHTGMDVCVKIIKNNKD-------------------------FFDQSLDEIKLLKYVNK 924 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAk-Dk~TGr~VAVKIIkk~k~-------------------------~~dq~l~EikILr~L~h 924 (1182)
|.|.+.||.|+||.||+|. +..+|+.||||+++.... .......|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 7788899999999999999 778999999999975421 01124578899998875
Q ss_pred CCCCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC-ccccccC
Q 001034 925 HDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG-LIHCDLK 1003 (1182)
Q Consensus 925 ~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G-IIHRDIK 1003 (1182)
. +..+.+++.. ...+|||||++|..+....... ..+....+..++.||+.+|.+||+.| |+|||||
T Consensus 110 ~----~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik 176 (237)
T smart00090 110 A----GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD-----VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLS 176 (237)
T ss_pred c----CCCCCeeeEe----cCceEEEEEecCCccccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence 3 1234444442 2358999999985443222111 12555667889999999999999999 9999999
Q ss_pred CccEEEccCCCceEEEecCCCccccCC
Q 001034 1004 PENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 1004 PeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
|+|||++ .+.++|+|||.+.....
T Consensus 177 p~NIli~---~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 177 EYNILVH---DGKVVIIDVSQSVELDH 200 (237)
T ss_pred hhhEEEE---CCCEEEEEChhhhccCC
Confidence 9999998 56799999999875443
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.61 E-value=8e-15 Score=150.99 Aligned_cols=132 Identities=20% Similarity=0.265 Sum_probs=102.6
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccch---------hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD---------FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~---------~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
+.||+|++|.||+|.. .+..+++|+...... .......|+.++..+.+. +|+....++.....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~p~~~~~~~~~ 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA------GVNVPAVYFVDPEN 73 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCeEEEEeCCC
Confidence 5789999999999986 778899998653211 123456788888888755 45554555566778
Q ss_pred EEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCC
Q 001034 946 LLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 946 LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
.++||||++| +|.+++... .. ....++.+|+.+|.+||+.+++|+|++|.|||++ .+.++|+|||+
T Consensus 74 ~~lv~e~~~G~~L~~~~~~~---------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~---~~~~~liDf~~ 140 (211)
T PRK14879 74 FIIVMEYIEGEPLKDLINSN---------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS---GGKIYLIDFGL 140 (211)
T ss_pred CEEEEEEeCCcCHHHHHHhc---------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE---CCCEEEEECCc
Confidence 8999999987 555554321 11 6778999999999999999999999999999998 46799999999
Q ss_pred ccc
Q 001034 1025 SCF 1027 (1182)
Q Consensus 1025 A~~ 1027 (1182)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 875
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.57 E-value=1.1e-15 Score=177.70 Aligned_cols=176 Identities=31% Similarity=0.434 Sum_probs=131.6
Q ss_pred CeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecC
Q 001034 944 EHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 944 e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
.++||.|+++. .+|.+++...+. ..+ .+...+..++.|+..|++| ++.+|+|+||.||+... +..+||.||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~-~e~--~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~--d~q~kIgDF 400 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRT-GEE--RSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSD--DDQLKIGDF 400 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCc-ccc--cchhHHHHHHHhhccchhh---ccchhhhcccccccccc--chhhhhhhh
Confidence 46999999998 567777764432 222 6677788999999999999 99999999999999984 567999999
Q ss_pred CCccccCCC---------cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhc-
Q 001034 1023 GSSCFETDH---------LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCT-GNVLFQNDSPATLLARVIGII- 1091 (1182)
Q Consensus 1023 GLA~~~~~~---------~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLT-Gr~PF~g~d~~elLakIv~il- 1091 (1182)
|+.+..... ....+||..||+||.+.+..|+.++||||||+|||||+. -...| +.++.+..+.
T Consensus 401 gl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~------er~~t~~d~r~ 474 (516)
T KOG1033|consen 401 GLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF------ERIATLTDIRD 474 (516)
T ss_pred hheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH------HHHHhhhhhhc
Confidence 998654332 345689999999999999999999999999999999998 22222 1111111100
Q ss_pred CCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCC
Q 001034 1092 GPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHP 1171 (1182)
Q Consensus 1092 Gp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHP 1171 (1182)
|.+|..++ ...+.-..|+.+||...|.+||++.+..-|+
T Consensus 475 g~ip~~~~-----------------------------------------~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~ 513 (516)
T KOG1033|consen 475 GIIPPEFL-----------------------------------------QDYPEEYTLLQQLLSPSPEERPSAIEVALHE 513 (516)
T ss_pred CCCChHHh-----------------------------------------hcCcHHHHHHHHhcCCCcccCchHHHHhhhh
Confidence 11111110 1124456899999999999999999998898
Q ss_pred CCC
Q 001034 1172 WLS 1174 (1182)
Q Consensus 1172 WFk 1174 (1182)
|++
T Consensus 514 ~~~ 516 (516)
T KOG1033|consen 514 FLQ 516 (516)
T ss_pred hcC
Confidence 864
No 426
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.57 E-value=2.6e-15 Score=163.37 Aligned_cols=242 Identities=18% Similarity=0.255 Sum_probs=179.1
Q ss_pred CCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 869 GRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 869 drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
....++.+|.....|+.|+++. .|..++.|++.... .....+..|.-.|+.+ .||||+.+++.+..+-+
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~risrdfneefp~lrif------shpnilpvlgacnsppn 261 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARISRDFNEEFPALRIF------SHPNILPVLGACNSPPN 261 (448)
T ss_pred hhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhcchhhhhCcceeee------cCCchhhhhhhccCCCC
Confidence 3455677889999999999974 56677888886432 2233455555555555 46699999999999999
Q ss_pred EEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--ccccccCCccEEEccCCCceEEEecC
Q 001034 946 LLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG--LIHCDLKPENILVKSYSRCEVKVIDL 1022 (1182)
Q Consensus 946 LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G--IIHRDIKPeNILIDs~~dG~IKLiDF 1022 (1182)
+.+|..||+ |+|+..+... ........++.+++..|++++.|||+.. |.---|....++||..-...+...|-
T Consensus 262 lv~isq~mp~gslynvlhe~----t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~ 337 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQ----TSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADT 337 (448)
T ss_pred ceEeeeeccchHHHHHHhcC----ccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccc
Confidence 999999999 7888887743 3345778889999999999999999874 44456888999999533334444454
Q ss_pred CCccccCCCcccccCCCcccchhhhcCCCCC---chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1023 GSSCFETDHLCSYVQSRSYRAPEVILGLSYD---KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1023 GLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS---~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
-++..... ..-.|.|++||.+..++-+ .++|+|||++++|||.|...||..-++.+.-.+|.
T Consensus 338 kfsfqe~g----r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----------- 402 (448)
T KOG0195|consen 338 KFSFQEVG----RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----------- 402 (448)
T ss_pred eeeeeccc----cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh-----------
Confidence 43332221 2336889999999877643 68999999999999999999999888776655542
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHH
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDAL 1168 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELL 1168 (1182)
...+. .+..+..+..+..|+.-|+.-||.+||....++
T Consensus 403 ----------------------leglr---------v~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 403 ----------------------LEGLR---------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------------------hcccc---------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 00111 123356678899999999999999999987654
No 427
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.55 E-value=4e-14 Score=146.24 Aligned_cols=137 Identities=19% Similarity=0.171 Sum_probs=102.0
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchh-----------------------hHHHHHHHHHHHHhcCCCC
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF-----------------------FDQSLDEIKLLKYVNKHDP 927 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~-----------------------~dq~l~EikILr~L~h~~~ 927 (1182)
|.+.+.||.|+||.||++.. .+|+.||||+++..... ......|..++..+.+..
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~- 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG- 94 (198)
T ss_pred hhcCCccccCcceEEEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC-
Confidence 77788999999999999986 48999999998753210 112456777777776542
Q ss_pred CCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccE
Q 001034 928 GDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENI 1007 (1182)
Q Consensus 928 l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNI 1007 (1182)
..++.+++ ....++||||+.|..+..+.. ......++.+|+.+|.++|..||+||||||.||
T Consensus 95 ---i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-----------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Ni 156 (198)
T cd05144 95 ---FPVPKPID----WNRHAVVMEYIDGVELYRVRV-----------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNI 156 (198)
T ss_pred ---CCCCceee----cCCceEEEEEeCCcchhhccc-----------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccE
Confidence 13444443 245689999999854433211 124567889999999999999999999999999
Q ss_pred EEccCCCceEEEecCCCccccC
Q 001034 1008 LVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 1008 LIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
+++. ++.++|+|||++....
T Consensus 157 ll~~--~~~~~liDfg~~~~~~ 176 (198)
T cd05144 157 LVDD--DEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEcC--CCcEEEEECCccccCC
Confidence 9984 7789999999986544
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.54 E-value=6.4e-14 Score=143.33 Aligned_cols=129 Identities=19% Similarity=0.205 Sum_probs=96.5
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccc---------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.||+|+||.||++. .++..+++|+..... ........|++++..+.+. ++....-++......
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~p~~~~~~~~~~ 72 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKA------GVNTPVVYDVDPDNK 72 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEEECCCC
Confidence 37999999999998 567899999865421 1124456789999888765 222222233456677
Q ss_pred EEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
++||||++|. |.+++... .. .++.+|+.+|.+||+.|++|+|++|.|||++ .+.++|+|||++
T Consensus 73 ~lv~e~~~g~~l~~~~~~~------------~~-~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~---~~~~~liDfg~a 136 (199)
T TIGR03724 73 TIVMEYIEGKPLKDVIEEG------------ND-ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR---DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEEECCccHHHHHhhc------------HH-HHHHHHHHHHHHHHHCCeecCCCCcceEEEE---CCcEEEEECCCC
Confidence 9999999864 54443211 00 7889999999999999999999999999998 567999999998
Q ss_pred ccc
Q 001034 1026 CFE 1028 (1182)
Q Consensus 1026 ~~~ 1028 (1182)
...
T Consensus 137 ~~~ 139 (199)
T TIGR03724 137 KYS 139 (199)
T ss_pred cCC
Confidence 753
No 429
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.52 E-value=8.1e-14 Score=141.00 Aligned_cols=138 Identities=22% Similarity=0.256 Sum_probs=95.6
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHH-------------------------HHHHHHHHHHhcCCCCC
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQ-------------------------SLDEIKLLKYVNKHDPG 928 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq-------------------------~l~EikILr~L~h~~~l 928 (1182)
.+.||+|+||.||+|.+. +++.||||+++........ ...|...+..+....
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-- 78 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG-- 78 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence 467999999999999976 8999999998764311111 123455555554331
Q ss_pred CCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccE
Q 001034 929 DKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENI 1007 (1182)
Q Consensus 929 ~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNI 1007 (1182)
..+.+++.. ...++||||++++........... .. ..++.++.+++.++.++|. .+|+|+||||+||
T Consensus 79 --~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Ni 146 (187)
T cd05119 79 --VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNI 146 (187)
T ss_pred --CCCCceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhE
Confidence 124444443 246899999997321111000000 11 5678899999999999999 9999999999999
Q ss_pred EEccCCCceEEEecCCCccccC
Q 001034 1008 LVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 1008 LIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
+++ ++.++|+|||.+....
T Consensus 147 li~---~~~~~liDfg~a~~~~ 165 (187)
T cd05119 147 LVD---DGKVYIIDVPQAVEID 165 (187)
T ss_pred EEE---CCcEEEEECccccccc
Confidence 998 5679999999986543
No 430
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.49 E-value=1.6e-13 Score=129.46 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=107.3
Q ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 873 VTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 873 Ilk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
+++.||.|.++.||++.... ..+++|++..... ...+..|+.+++.+.+. ..++++++.++......++||||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999643 7899999876543 45678899999999765 23677888888777889999999
Q ss_pred cccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc---CccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 953 LKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL---GLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 953 L~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~---GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+.|.....+ +......++.+++.+|.+||.. +++|+||+|.|||++. .+.++|+|||.+..
T Consensus 75 ~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~--~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDD--GKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEEC--CcEEEEEecccccC
Confidence 987533211 3345667889999999999985 7999999999999984 67899999998764
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.48 E-value=2.6e-13 Score=161.20 Aligned_cols=136 Identities=21% Similarity=0.222 Sum_probs=103.1
Q ss_pred cCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD 938 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d 938 (1182)
...|...+.||+|+||.||++... +..+++|+..... .....+..|+++++.+.++ +++.++.
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~------~i~~p~~ 403 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRA------GVPTPVI 403 (535)
T ss_pred ccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhccc------CCCeeEE
Confidence 445667889999999999999754 3344554432110 1234567899999998765 5666666
Q ss_pred EEEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceE
Q 001034 939 YFYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEV 1017 (1182)
Q Consensus 939 sFqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~I 1017 (1182)
++......++||||+.| +|.+++. ....++.+|+.+|.+||+.|++||||||+|||++ .+.+
T Consensus 404 ~~~~~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~---~~~~ 466 (535)
T PRK09605 404 YDVDPEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR---DDRL 466 (535)
T ss_pred EEEeCCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE---CCcE
Confidence 66677788999999986 4554443 2456889999999999999999999999999995 5679
Q ss_pred EEecCCCcccc
Q 001034 1018 KVIDLGSSCFE 1028 (1182)
Q Consensus 1018 KLiDFGLA~~~ 1028 (1182)
+|+|||+++..
T Consensus 467 ~liDFGla~~~ 477 (535)
T PRK09605 467 YLIDFGLGKYS 477 (535)
T ss_pred EEEeCcccccC
Confidence 99999998753
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=4.2e-15 Score=179.28 Aligned_cols=258 Identities=21% Similarity=0.280 Sum_probs=189.8
Q ss_pred cCCEEEEEEeccCCceEEEEEEEC-CCCcEEEEEEEeccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 868 AGRYHVTEYLGSAAFSKAIQAHDL-HTGMDVCVKIIKNNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 868 ~drYeIlk~LGkGaFGeVyLAkDk-~TGr~VAVKIIkk~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
...|.+.+.||+|+|+.|-++... .+...+|+|.+.... ....++..|..+.+.+.. |.|++.+++.....
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~-----h~n~~~~~~~~~~~ 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSK-----HSNTVHMIEPSSSP 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccc-----cccccccCCccCCC
Confidence 456888999999999999998864 445557777765442 333344445555555542 56999999999999
Q ss_pred CeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHH-hcCccccccCCccEEEccCCCc-eEEEe
Q 001034 944 EHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLH-GLGLIHCDLKPENILVKSYSRC-EVKVI 1020 (1182)
Q Consensus 944 e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLH-S~GIIHRDIKPeNILIDs~~dG-~IKLi 1020 (1182)
+..++++++..|+ +...+. .... ...+...+.+++.|+..+|.|+| ..++.|+||||+|.+++. .+ .+++.
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~-~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~--s~~~l~~~ 167 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKIS-HPDS---TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE--SGSALKIA 167 (601)
T ss_pred cccccccCcccccccccccc-cCCc---cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc--CCCcccCC
Confidence 9999999997763 443331 1111 12667788999999999999999 999999999999999995 55 79999
Q ss_pred cCCCccccCC-C-----cccccC-CCcccchhhhcCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcC
Q 001034 1021 DLGSSCFETD-H-----LCSYVQ-SRSYRAPEVILGL-SYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIG 1092 (1182)
Q Consensus 1021 DFGLA~~~~~-~-----~ss~vG-Tp~YmAPEVLlg~-~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilG 1092 (1182)
|||+|..... . ....+| ++.|+|||.+.+. -.....|+||+|+++.-|++|..|+........
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~--------- 238 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG--------- 238 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---------
Confidence 9999975444 1 234678 9999999999985 456789999999999999999999865432210
Q ss_pred CcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCC
Q 001034 1093 PIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPW 1172 (1182)
Q Consensus 1093 p~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPW 1172 (1182)
.++. + ... ............+....+++.+||..+|..|.+.+++-.+||
T Consensus 239 --------------~~~~----~---------~~~---~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~ 288 (601)
T KOG0590|consen 239 --------------RYSS----W---------KSN---KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNW 288 (601)
T ss_pred --------------ccee----e---------ccc---ccccccCccccCChhhhhcccccccCCchhcccccccccccc
Confidence 0000 0 000 000011123344678889999999999999999999999999
Q ss_pred CCC
Q 001034 1173 LSH 1175 (1182)
Q Consensus 1173 Fk~ 1175 (1182)
+..
T Consensus 289 ~~~ 291 (601)
T KOG0590|consen 289 LSS 291 (601)
T ss_pred ccc
Confidence 987
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.41 E-value=5.2e-14 Score=173.11 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=194.9
Q ss_pred ecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 867 IAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 867 L~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
-.+.+.+.+-+-+|+|+.++.+....+|...++|+..+...........+..-+.+.+. ..+|.++.....|.-...+
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~--p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILIT--PRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCcccc--CCCCceecccCCCCCCCCc
Confidence 34678888999999999999999888998888888776543322212222222222211 1346777777777777899
Q ss_pred EEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
+|||+|+.+ +|...+.... .....-++.++..++.+++|||...++|+|++|.|+|+. ..++.++++||..
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~------~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~--~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSG------CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA--YDGHRPLTDFGTL 951 (1205)
T ss_pred chhhHHhccCCchhhhhcCC------CcccccccchhHHHHhhhhccccchhhcccccccchhhc--ccCCcccCccccc
Confidence 999999975 5555544332 255566788889999999999999999999999999998 4778999999832
Q ss_pred cccC----------------------------------CCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 001034 1026 CFET----------------------------------DHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTG 1071 (1182)
Q Consensus 1026 ~~~~----------------------------------~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTG 1071 (1182)
.... ......++|+.|++||...+......+|||++|+++++.++|
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence 1100 001234679999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHH
Q 001034 1072 NVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVA 1151 (1182)
Q Consensus 1072 r~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIr 1151 (1182)
.+||....+...+..|.....+.|.. ....+.++.+++.
T Consensus 1032 ~pp~na~tpq~~f~ni~~~~~~~p~g-----------------------------------------~~~~s~~aq~~~~ 1070 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILNRDIPWPEG-----------------------------------------PEEGSYEAQDLIN 1070 (1205)
T ss_pred CCCCCCcchhhhhhccccCCCCCCCC-----------------------------------------ccccChhhhhhhh
Confidence 99999999988887774322222211 1123577889999
Q ss_pred HhcccCCCCCCCHH---HHHcCCCCCCC
Q 001034 1152 HLLEINPKKRPSAS---DALKHPWLSHP 1176 (1182)
Q Consensus 1152 kMLq~DPekRPTAe---ELLqHPWFk~~ 1176 (1182)
.+|..+|.+|..+. ++-.||||+..
T Consensus 1071 ~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1071 RLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred hhhccCchhccCcccccccccCCccCCC
Confidence 99999999999988 99999999876
No 434
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.38 E-value=1.6e-12 Score=152.97 Aligned_cols=198 Identities=23% Similarity=0.275 Sum_probs=144.0
Q ss_pred CCCcceEEEEEEEEecCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCc-cccccCCc
Q 001034 928 GDKYHLLRLYDYFYYREHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGL-IHCDLKPE 1005 (1182)
Q Consensus 928 l~HPnIVkL~dsFqd~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GI-IHRDIKPe 1005 (1182)
+.|.|+.++++.+.+....++|.+|+. |+|.+.+.... ..+...-...+++.|+.+|.|||.-.| .|+.+++.
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 456799999999999999999999998 67887776522 225566667788999999999998665 99999999
Q ss_pred cEEEccCCCceEEEecCCCccccCC-----CcccccCCCcccchhhhcCCC-------CCchhhHHHHHHHHHHHHhCCC
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCFETD-----HLCSYVQSRSYRAPEVILGLS-------YDKKIDIWSLGCILAELCTGNV 1073 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~~~~-----~~ss~vGTp~YmAPEVLlg~~-------yS~kSDIWSLGVILYELLTGr~ 1073 (1182)
|++++. ...+||+|||+...... ......-..-|.|||++.... .+.+.|+||+|+|++|+++..-
T Consensus 79 nClvd~--~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 79 NCLVDS--RWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cceeee--eEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 999994 88999999999876542 111122345599999997631 4677999999999999999999
Q ss_pred CCCCC----CHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHH
Q 001034 1074 LFQND----SPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDF 1149 (1182)
Q Consensus 1074 PF~g~----d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DL 1149 (1182)
||... .+.+++.++.. .+. ....|...... ...+.+..+
T Consensus 157 ~~~~~~~~~~~~eii~~~~~-~~~--------------------------------~~~rP~i~~~~----e~~~~l~~l 199 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKK-GGS--------------------------------NPFRPSIELLN----ELPPELLLL 199 (484)
T ss_pred ccccccccCChHHHHHHHHh-cCC--------------------------------CCcCcchhhhh----hcchHHHHH
Confidence 99752 22233333321 000 00011111110 223478999
Q ss_pred HHHhcccCCCCCCCHHHHHc
Q 001034 1150 VAHLLEINPKKRPSASDALK 1169 (1182)
Q Consensus 1150 IrkMLq~DPekRPTAeELLq 1169 (1182)
++.|+.-+|..||++.++-.
T Consensus 200 ~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 200 VARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHhcccChhhCccHHHHHh
Confidence 99999999999999998643
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.35 E-value=1.1e-11 Score=134.01 Aligned_cols=133 Identities=15% Similarity=0.168 Sum_probs=95.6
Q ss_pred Eec-cCCceEEEEEEECCCCcEEEEEEEeccc--------------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEE
Q 001034 876 YLG-SAAFSKAIQAHDLHTGMDVCVKIIKNNK--------------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYF 940 (1182)
Q Consensus 876 ~LG-kGaFGeVyLAkDk~TGr~VAVKIIkk~k--------------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsF 940 (1182)
.|| .|+.|+||.+.. .+..++||.+.... .......+|+.++..+.+.. ..++.++++.
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g----i~vP~pl~~~ 111 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG----LPVPRPIAAR 111 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC----CCCceeEeee
Confidence 566 788888888875 47889999885421 11245677999999998753 1245555554
Q ss_pred EecC----eEEEEEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCC
Q 001034 941 YYRE----HLLIVCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSR 1014 (1182)
Q Consensus 941 qd~e----~LyLVmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~d 1014 (1182)
.... ..+||||+++| +|.+++... .++.. .+.+|+.+|.+||++||+||||||.|||++. +
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~--~ 178 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQEA-------PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDP--D 178 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcC--C
Confidence 3322 23599999996 565554321 13433 3578999999999999999999999999985 5
Q ss_pred ceEEEecCCCccc
Q 001034 1015 CEVKVIDLGSSCF 1027 (1182)
Q Consensus 1015 G~IKLiDFGLA~~ 1027 (1182)
+.++|+|||.+..
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 5799999999865
No 436
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.15 E-value=3.5e-10 Score=120.19 Aligned_cols=139 Identities=17% Similarity=0.183 Sum_probs=98.9
Q ss_pred EEeccCCceEEEEEEECC------CCcEEEEEEEeccc-----------------------hhhHHHH----HHHHHHHH
Q 001034 875 EYLGSAAFSKAIQAHDLH------TGMDVCVKIIKNNK-----------------------DFFDQSL----DEIKLLKY 921 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~------TGr~VAVKIIkk~k-----------------------~~~dq~l----~EikILr~ 921 (1182)
..||.|--+.||.|.... .+..+|||+++... .+...+. .|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998643 35799999986320 0111222 78889988
Q ss_pred hcCCCCCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHH-HhcCcccc
Q 001034 922 VNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFL-HGLGLIHC 1000 (1182)
Q Consensus 922 L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYL-HS~GIIHR 1000 (1182)
+.... -.+.+++++ ..-+|||||++++.+..-... +..++...+..+..+++.+|..| |+.||||+
T Consensus 83 l~~~G----v~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHG 149 (197)
T cd05146 83 MQKAG----IPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHA 149 (197)
T ss_pred HHHcC----CCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 87652 135555553 456799999986422111111 11245556677889999999999 89999999
Q ss_pred ccCCccEEEccCCCceEEEecCCCccccC
Q 001034 1001 DLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 1001 DIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
||++.|||+. ++.+.|+|||.+....
T Consensus 150 DLs~~NIL~~---~~~v~iIDF~qav~~~ 175 (197)
T cd05146 150 DLSEYNMLWH---DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CCCHHHEEEE---CCcEEEEECCCceeCC
Confidence 9999999997 4679999999987654
No 437
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.15 E-value=2.9e-10 Score=112.82 Aligned_cols=129 Identities=19% Similarity=0.175 Sum_probs=93.9
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
++.|+.|.++.||++.. .+..|++|+.............|..+++.+.... .+.+++..+ ....++|||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~-----~~P~~~~~~--~~~~~lv~e~i 73 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAG-----IGPKLYYFD--PETGVLITEFI 73 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhC-----CCCceEEEe--CCCCeEEEEec
Confidence 45789999999999985 3788999998765432334568889998886542 234455443 33458999999
Q ss_pred ccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCc-----cccccCCccEEEccCCCceEEEecCCCccc
Q 001034 954 KANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGL-----IHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 954 ~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GI-----IHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+|....... . ....++.+++.+|..||..++ +|+|++|.|||++ .+.++|+||+.+..
T Consensus 74 ~G~~l~~~~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~---~~~~~liDf~~a~~ 136 (170)
T cd05151 74 EGSELLTED----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD---DGRLWLIDWEYAGM 136 (170)
T ss_pred CCCcccccc----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE---CCeEEEEecccccC
Confidence 985332110 1 113456799999999999885 9999999999998 35699999998753
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=5.6e-11 Score=140.69 Aligned_cols=254 Identities=20% Similarity=0.187 Sum_probs=184.5
Q ss_pred eecCCEEEEEEecc--CCceEEEEEEE--CCCCcEEEEEEEecc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE
Q 001034 866 VIAGRYHVTEYLGS--AAFSKAIQAHD--LHTGMDVCVKIIKNN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD 938 (1182)
Q Consensus 866 iL~drYeIlk~LGk--GaFGeVyLAkD--k~TGr~VAVKIIkk~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d 938 (1182)
.+...|.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. ......-.++....+ ....|++.++.+.
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~-----~i~~~~~~v~~~~ 185 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHH-----KIDSHENPVRDSP 185 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhccc-----ccCccccccccCc
Confidence 45567888889999 99999999998 889999999973321 111122233333333 3345678999999
Q ss_pred EEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHH----HHHHHHhcCccccccCCccEEEccCCC
Q 001034 939 YFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLE----ALQFLHGLGLIHCDLKPENILVKSYSR 1014 (1182)
Q Consensus 939 sFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILs----ALeYLHS~GIIHRDIKPeNILIDs~~d 1014 (1182)
.+.....+|+-+|++...+..+...... .++...++.++.++.. ||.++|..+++|-|+||.||++.. +
T Consensus 186 ~~e~~~~lfiqtE~~~~sl~~~~~~~~~-----~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~--~ 258 (524)
T KOG0601|consen 186 AWEGSGILFIQTELCGESLQSYCHTPCN-----FLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTS--D 258 (524)
T ss_pred ccccCCcceeeeccccchhHHhhhcccc-----cCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccc--c
Confidence 9999999999999999887777654432 2777888888888888 999999999999999999999985 4
Q ss_pred -ceEEEecCCCccccCCCc--------ccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHH
Q 001034 1015 -CEVKVIDLGSSCFETDHL--------CSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQND-SPATLL 1084 (1182)
Q Consensus 1015 -G~IKLiDFGLA~~~~~~~--------ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~-d~~elL 1084 (1182)
...+++|||+........ ....+...|++||+..+ -++...|+|+||.++.+..++-.++... +.
T Consensus 259 ~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~---- 333 (524)
T KOG0601|consen 259 WTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS---- 333 (524)
T ss_pred cceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC----
Confidence 779999999876544332 12245677999998755 5688999999999999999887655321 10
Q ss_pred HHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCH
Q 001034 1085 ARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSA 1164 (1182)
Q Consensus 1085 akIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTA 1164 (1182)
.|..+++ .. +|. ......+..+...+..||+.+|..|+++
T Consensus 334 --------------------~W~~~r~---------~~------ip~-----e~~~~~s~~l~~~~~~~~d~~~~~~~~~ 373 (524)
T KOG0601|consen 334 --------------------SWSQLRQ---------GY------IPL-----EFCEGGSSSLRSVTSQMLDEDPRLRLTA 373 (524)
T ss_pred --------------------Ccccccc---------cc------Cch-----hhhcCcchhhhhHHHHhcCcchhhhhHH
Confidence 0000000 00 000 0111234566669999999999999999
Q ss_pred HHHHcCCCCCCC
Q 001034 1165 SDALKHPWLSHP 1176 (1182)
Q Consensus 1165 eELLqHPWFk~~ 1176 (1182)
+.++.|+++...
T Consensus 374 q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 374 QILTALNVIHSK 385 (524)
T ss_pred HHHhccccccch
Confidence 999999998643
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.06 E-value=1.5e-10 Score=138.67 Aligned_cols=151 Identities=18% Similarity=0.267 Sum_probs=88.5
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-----------------------------------hhhHHHHH
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-----------------------------------DFFDQSLD 914 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-----------------------------------~~~dq~l~ 914 (1182)
.|.. +.||.|++|+||+|+.+.+|+.||||+++... .......+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 3555 68999999999999998889999999997541 01111222
Q ss_pred HHHHHH------HhcCC-CCCCCcceEEEEEEEEecCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHH
Q 001034 915 EIKLLK------YVNKH-DPGDKYHLLRLYDYFYYREHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCL 986 (1182)
Q Consensus 915 EikILr------~L~h~-~~l~HPnIVkL~dsFqd~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QIL 986 (1182)
|+.+.+ ++... .....-.|.++|.- .....+|||||+.|. +.++............+....+..++.||
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d--~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWD--YCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecc--cCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 333322 22211 00011122333321 245678999999984 44332211110000013333344444444
Q ss_pred HHHHHHHhcCccccccCCccEEEccCC--CceEEEecCCCccccCC
Q 001034 987 EALQFLHGLGLIHCDLKPENILVKSYS--RCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 987 sALeYLHS~GIIHRDIKPeNILIDs~~--dG~IKLiDFGLA~~~~~ 1030 (1182)
+..|++|+|+||.||+++.++ .+.++++|||++.....
T Consensus 277 ------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 458999999999999998522 23899999998865443
No 440
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.01 E-value=1.6e-09 Score=127.03 Aligned_cols=141 Identities=16% Similarity=0.212 Sum_probs=89.8
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccchh-h----------------------------------H------HHH
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDF-F----------------------------------D------QSL 913 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~-~----------------------------------d------q~l 913 (1182)
+.||.|++|+||+|+. .+|+.||||+.+..-.. . . .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3699999999999985 58999999998754100 0 0 122
Q ss_pred HHHHHHHHhcCCCCCCCcc--eEEEEEEEEecCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHH-HH
Q 001034 914 DEIKLLKYVNKHDPGDKYH--LLRLYDYFYYREHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLE-AL 989 (1182)
Q Consensus 914 ~EikILr~L~h~~~l~HPn--IVkL~dsFqd~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILs-AL 989 (1182)
.|...+.++...- ..+++ +.+++. ......+|||||+.|. +.++...... + + ....++..++. .+
T Consensus 202 ~Ea~n~~~~~~~~-~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~-~----~---~~~~ia~~~~~~~l 270 (437)
T TIGR01982 202 REAANASELGENF-KNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEA-G----L---DRKALAENLARSFL 270 (437)
T ss_pred HHHHHHHHHHHhc-CCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhc-C----C---CHHHHHHHHHHHHH
Confidence 2333333333210 01222 333332 2345578999999974 4444332211 1 1 12345556655 47
Q ss_pred HHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 990 QFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 990 eYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
..+|..|++|+|++|.||+++. ++.++|+|||++....
T Consensus 271 ~ql~~~g~~H~D~hPgNilv~~--~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 271 NQVLRDGFFHADLHPGNIFVLK--DGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHhCCceeCCCCcccEEECC--CCcEEEEeCCCeeECC
Confidence 8899999999999999999984 6789999999987654
No 441
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.97 E-value=4.9e-10 Score=132.81 Aligned_cols=254 Identities=19% Similarity=0.169 Sum_probs=180.7
Q ss_pred eecCCEEEEEEeccCCceEEEEEEEC-CCCcEEEEEEEeccchhh---HHHHHHHHHHHHhcCCCCCCCcceEEEEEEEE
Q 001034 866 VIAGRYHVTEYLGSAAFSKAIQAHDL-HTGMDVCVKIIKNNKDFF---DQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFY 941 (1182)
Q Consensus 866 iL~drYeIlk~LGkGaFGeVyLAkDk-~TGr~VAVKIIkk~k~~~---dq~l~EikILr~L~h~~~l~HPnIVkL~dsFq 941 (1182)
....+|.++..||.|.|+.|+.+... .++..|++|-+.+..... ...+.|+.++..+.. |.+++..+..+.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~-----~~~~~g~~~~W~ 336 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGS-----HLPSVGKNSSWS 336 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhc-----ccccCCCCCCcc
Confidence 34678999999999999999998755 678889999887653211 123456666666653 347888888888
Q ss_pred ecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEec
Q 001034 942 YREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 942 d~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
...+.||=.||+.+....+-... .+++.+...+.+..|++.++.++|++.++|+|+||+||++...+ +..++.|
T Consensus 337 ~~r~~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~-~~~~~~~ 410 (524)
T KOG0601|consen 337 QLRQGYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG-FFSKLGD 410 (524)
T ss_pred ccccccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch-hhhhccc
Confidence 88888899999986544433311 12377888999999999999999999999999999999998532 7789999
Q ss_pred CCCccccCCCcccccC-CCcc-cchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhh
Q 001034 1022 LGSSCFETDHLCSYVQ-SRSY-RAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGML 1099 (1182)
Q Consensus 1022 FGLA~~~~~~~ss~vG-Tp~Y-mAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL 1099 (1182)
||..+...-....... +..| .+|.......+..+.|++|||.-+.+.+++.+.-...... ..
T Consensus 411 ~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~------------- 474 (524)
T KOG0601|consen 411 FGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LT------------- 474 (524)
T ss_pred cccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcccccc---ee-------------
Confidence 9988653222222222 3334 3555556667889999999999999999987543221100 00
Q ss_pred hcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1100 AKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1100 ~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.........+.....+..+...|+..++..|+.+.++..|.=|-..-
T Consensus 475 -------------------------------i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~~ 521 (524)
T KOG0601|consen 475 -------------------------------IRSGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRDS 521 (524)
T ss_pred -------------------------------eecccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhhhc
Confidence 00011122233346778889999999999999999999998765443
No 442
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.97 E-value=1e-09 Score=123.20 Aligned_cols=195 Identities=18% Similarity=0.261 Sum_probs=134.9
Q ss_pred CcceEEEEEEEEecC-----eEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcC--ccccc
Q 001034 930 KYHLLRLYDYFYYRE-----HLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLG--LIHCD 1001 (1182)
Q Consensus 930 HPnIVkL~dsFqd~e-----~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~G--IIHRD 1001 (1182)
|-|||+++.++.+.. ...++.|||. |++..+++.....+. .+......+|+-||+.||.|||++. |+|+.
T Consensus 126 HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~--a~~~~~wkkw~tqIlsal~yLhs~~Ppiihgn 203 (458)
T KOG1266|consen 126 HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQK--ALFQKAWKKWCTQILSALSYLHSCDPPIIHGN 203 (458)
T ss_pred HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhh--hhhHHHHHHHHHHHHhhhhhhhccCCccccCC
Confidence 447899888877653 4788999998 788888887655433 3778888999999999999999875 99999
Q ss_pred cCCccEEEccCCCceEEEecCCCccccCC-------CcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001034 1002 LKPENILVKSYSRCEVKVIDLGSSCFETD-------HLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVL 1074 (1182)
Q Consensus 1002 IKPeNILIDs~~dG~IKLiDFGLA~~~~~-------~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~P 1074 (1182)
+..+-|++.. +|-|||.---....... ......+-+.|.|||.=..-..+.++|||++|....+|..+..-
T Consensus 204 lTc~tifiq~--ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq 281 (458)
T KOG1266|consen 204 LTCDTIFIQH--NGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQ 281 (458)
T ss_pred cchhheeecC--CceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheec
Confidence 9999999984 66677643221111100 01112346789999987766778899999999999999887643
Q ss_pred C-CCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCCCCCcHHHHHHHHHh
Q 001034 1075 F-QNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHL 1153 (1182)
Q Consensus 1075 F-~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l~~~SeeL~DLIrkM 1153 (1182)
- .+.+....-..|. +. ........-+++|.+|
T Consensus 282 ~tnseS~~~~ee~ia-------------------------------------~~----------i~~len~lqr~~i~kc 314 (458)
T KOG1266|consen 282 STNSESKVEVEENIA-------------------------------------NV----------IIGLENGLQRGSITKC 314 (458)
T ss_pred cCCCcceeehhhhhh-------------------------------------hh----------eeeccCccccCcCccc
Confidence 2 2211111100110 00 0000112234789999
Q ss_pred cccCCCCCCCHHHHHcCCCCCC
Q 001034 1154 LEINPKKRPSASDALKHPWLSH 1175 (1182)
Q Consensus 1154 Lq~DPekRPTAeELLqHPWFk~ 1175 (1182)
|+..|..||+|..+|.||-+=+
T Consensus 315 l~~eP~~rp~ar~llfHpllfe 336 (458)
T KOG1266|consen 315 LEGEPNGRPDARLLLFHPLLFE 336 (458)
T ss_pred ccCCCCCCcchhhhhcCceeee
Confidence 9999999999999999997643
No 443
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.85 E-value=2.1e-08 Score=120.69 Aligned_cols=165 Identities=24% Similarity=0.280 Sum_probs=120.5
Q ss_pred EEEECCCCcEEEEEEEeccch-hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhc
Q 001034 887 QAHDLHTGMDVCVKIIKNNKD-FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNR 965 (1182)
Q Consensus 887 LAkDk~TGr~VAVKIIkk~k~-~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~ 965 (1182)
-+..+.++.+|.|.+++.... +.....+-++.|+.++ ||+|+++++.+....++|||+|.+.. |-.+++.
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlR------HP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~-- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLR------HPNILSYLDTTEEEGTLYLVTERVRP-LETVLKE-- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhcc------CchhhhhhhhhcccCceEEEeecccc-HHHHHHH--
Confidence 355578889999999876553 3344555566666665 45999999999999999999999853 2223322
Q ss_pred ccCCccccCHHHHHHHHHHHHHHHHHHH-hcCccccccCCccEEEccCCCceEEEecCCCccccCCCc---ccccCCCcc
Q 001034 966 ESGGEVYFTMPRLQSITIQCLEALQFLH-GLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHL---CSYVQSRSY 1041 (1182)
Q Consensus 966 ~sggel~Lse~eIr~Ia~QILsALeYLH-S~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~---ss~vGTp~Y 1041 (1182)
+....+...++||+.||.||| +++++|++|.-+.|+++. .|+.||.+|.++....... .....-..|
T Consensus 101 -------l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~--~GeWkLggle~v~~~~~~~~~~~~~~~~~s~ 171 (690)
T KOG1243|consen 101 -------LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNE--SGEWKLGGLELVSKASGFNAPAKSLYLIESF 171 (690)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcC--CCcEEEeeeEEEeccccCCcccccchhhhcc
Confidence 224566778899999999997 789999999999999994 7889999998875433222 112222336
Q ss_pred cchhhhcCCCCCchhhHHHHHHHHHHHHhC
Q 001034 1042 RAPEVILGLSYDKKIDIWSLGCILAELCTG 1071 (1182)
Q Consensus 1042 mAPEVLlg~~yS~kSDIWSLGVILYELLTG 1071 (1182)
..|+.+-... ...|.|-|||++++++.|
T Consensus 172 ~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 172 DDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 6666553322 457999999999999999
No 444
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.82 E-value=2.5e-08 Score=102.35 Aligned_cols=142 Identities=13% Similarity=0.101 Sum_probs=95.9
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccch--hhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---CeEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKD--FFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR---EHLLIV 949 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~--~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~---e~LyLV 949 (1182)
+.|+.|.++.||++... +|+.+++|+...... .......|..+++.+.... ..+.+++.+.... ...++|
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~----~~vp~~~~~~~~~~~~~~~~~v 78 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTG----VPVPKVLALCEDPSVLGTPFYV 78 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCC----CCCCCEEEECCCCCccCCceEE
Confidence 57899999999999863 368899999876543 3557788999999987641 1345555555443 257899
Q ss_pred EEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-----------------------------------
Q 001034 950 CELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG----------------------------------- 994 (1182)
Q Consensus 950 mEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS----------------------------------- 994 (1182)
|||+.|..+...... ..++......++.+++.+|..||+
T Consensus 79 ~e~i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (223)
T cd05154 79 MERVDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD 152 (223)
T ss_pred EEEeCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc
Confidence 999987422111100 013444455555555555555552
Q ss_pred ---------------------cCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 995 ---------------------LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 995 ---------------------~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
..+||+|++|.|||++....+.+.|+||+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 153 EPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred ccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 347999999999999852245689999998754
No 445
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.80 E-value=1.2e-07 Score=111.84 Aligned_cols=169 Identities=19% Similarity=0.217 Sum_probs=126.4
Q ss_pred eEEEEEEECCCCcEEEEEEEeccchhh-HHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe----cCeEEEEEEeccc--
Q 001034 883 SKAIQAHDLHTGMDVCVKIIKNNKDFF-DQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY----REHLLIVCELLKA-- 955 (1182)
Q Consensus 883 GeVyLAkDk~TGr~VAVKIIkk~k~~~-dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd----~e~LyLVmEyL~G-- 955 (1182)
.+.|+|....+|..|++|.++..+... .....-+++++++.|. |||++.++|.. ...+++|++|+++
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~------NvV~frevf~t~tF~D~SlvlvYDYyP~s~ 363 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHT------NVVPFREVFLTYTFGDLSLVLVYDYYPSSP 363 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccC------ceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence 578999999999999999996554322 2344557788888766 89999999883 3679999999995
Q ss_pred ChHHHHhhhcccC---------CccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 956 NLYEFHKFNRESG---------GEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 956 sLld~Lk~~~~sg---------gel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
+|++++-...... .....++..+|.|+.||..||.+||+.|+..+-|.|.+||++ ++.+|+|+..|...
T Consensus 364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~--G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT--GKMRIRISGCGIMD 441 (655)
T ss_pred hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee--CcceEEEeccccee
Confidence 6777664332211 112377889999999999999999999999999999999999 45578888877765
Q ss_pred ccCCCcccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Q 001034 1027 FETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNV 1073 (1182)
Q Consensus 1027 ~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~ 1073 (1182)
....... +.+. --.+-|.=.||.+++.|.||..
T Consensus 442 vl~~d~~-----------~~le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 442 VLQEDPT-----------EPLE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred eecCCCC-----------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence 4332220 1111 1246799999999999999964
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.78 E-value=6.9e-08 Score=102.36 Aligned_cols=143 Identities=20% Similarity=0.159 Sum_probs=107.1
Q ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEEEecc---------chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec
Q 001034 873 VTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---------KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR 943 (1182)
Q Consensus 873 Ilk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---------k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~ 943 (1182)
.+..|-+|+-+.|+++. ..|+.++||.-... +-......+|.++|.++... .|.-..-+|.+.
T Consensus 11 ~l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~------GI~~P~l~~~D~ 82 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL------GIPAPRLIFIDT 82 (229)
T ss_pred cceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh------CCCCceEEEEec
Confidence 56688899999999996 67888888753221 12345677899999988765 344444456677
Q ss_pred CeEEEEEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCC-CceEEEe
Q 001034 944 EHLLIVCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYS-RCEVKVI 1020 (1182)
Q Consensus 944 e~LyLVmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~-dG~IKLi 1020 (1182)
..-+|+|||++| ++.+++....... ........++..|-..|.-||..+|||+||..+||++.+.+ ...+.|+
T Consensus 83 ~~~~i~ME~~~g~~~vk~~i~~~~~~~----~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lI 158 (229)
T KOG3087|consen 83 YGGQIYMEFIDGASTVKDFILSTMEDE----SEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILI 158 (229)
T ss_pred CCCeEEEEeccchhHHHHHHHHHccCc----ccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEE
Confidence 778899999999 7888887654332 22333467888999999999999999999999999998632 2345899
Q ss_pred cCCCccc
Q 001034 1021 DLGSSCF 1027 (1182)
Q Consensus 1021 DFGLA~~ 1027 (1182)
|||++..
T Consensus 159 dfgls~~ 165 (229)
T KOG3087|consen 159 DFGLSSV 165 (229)
T ss_pred eecchhc
Confidence 9999864
No 447
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.74 E-value=7.4e-08 Score=102.13 Aligned_cols=129 Identities=19% Similarity=0.177 Sum_probs=94.0
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEecc---------chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNN---------KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~---------k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.+.+|+-+.++++.. -|..+++|.-.+. +-......+|.+++..+... .|...+-++.+....
T Consensus 3 ~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~------GV~~P~v~dvD~~~~ 74 (204)
T COG3642 3 LIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREA------GVPVPIVYDVDPDNG 74 (204)
T ss_pred hhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEEcCCCC
Confidence 578999999999953 4445666653322 12234567788999888765 344444455667788
Q ss_pred EEEEEecccChHH-HHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 947 LIVCELLKANLYE-FHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 947 yLVmEyL~GsLld-~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
.|+|||++|.++. ++... ...++..+-..+.-||..||||+||.++||++. .+.+.++|||++
T Consensus 75 ~I~me~I~G~~lkd~l~~~-------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~---~~~i~~IDfGLg 138 (204)
T COG3642 75 LIVMEYIEGELLKDALEEA-------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS---GGRIYFIDFGLG 138 (204)
T ss_pred EEEEEEeCChhHHHHHHhc-------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe---CCcEEEEECCcc
Confidence 8999999996543 54432 134677788888999999999999999999998 344999999998
Q ss_pred ccc
Q 001034 1026 CFE 1028 (1182)
Q Consensus 1026 ~~~ 1028 (1182)
.+.
T Consensus 139 ~~s 141 (204)
T COG3642 139 EFS 141 (204)
T ss_pred ccc
Confidence 753
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.64 E-value=1.4e-07 Score=99.81 Aligned_cols=127 Identities=26% Similarity=0.315 Sum_probs=80.1
Q ss_pred EEEEEEECCCCcEEEEEEEeccc---------------------------hhhHHHHHHHHHHHHhcCCCCCCCcceEEE
Q 001034 884 KAIQAHDLHTGMDVCVKIIKNNK---------------------------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRL 936 (1182)
Q Consensus 884 eVyLAkDk~TGr~VAVKIIkk~k---------------------------~~~dq~l~EikILr~L~h~~~l~HPnIVkL 936 (1182)
.||.|.. ..|..+|||+.+... .......+|.+.|..+.... -++.++
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G----v~vP~p 75 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG----VPVPKP 75 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-----SS--E
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC----ccCCcE
Confidence 3888886 667899999987421 01233567889999887652 135566
Q ss_pred EEEEEecCeEEEEEEecc--cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHH-HHhcCccccccCCccEEEccCC
Q 001034 937 YDYFYYREHLLIVCELLK--ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQF-LHGLGLIHCDLKPENILVKSYS 1013 (1182)
Q Consensus 937 ~dsFqd~e~LyLVmEyL~--GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeY-LHS~GIIHRDIKPeNILIDs~~ 1013 (1182)
+++- .-+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++.
T Consensus 76 ~~~~----~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~-- 142 (188)
T PF01163_consen 76 YDYN----RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD-- 142 (188)
T ss_dssp EEEE----TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET--
T ss_pred EEEe----CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec--
Confidence 5432 3469999999 64333332211 1123456778888885555 58999999999999999984
Q ss_pred CceEEEecCCCccccC
Q 001034 1014 RCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 1014 dG~IKLiDFGLA~~~~ 1029 (1182)
+.+.|||||.+....
T Consensus 143 -~~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 143 -GKVYIIDFGQAVDSS 157 (188)
T ss_dssp -TCEEE--GTTEEETT
T ss_pred -ceEEEEecCcceecC
Confidence 379999999986544
No 449
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.54 E-value=3.3e-08 Score=119.48 Aligned_cols=152 Identities=18% Similarity=0.251 Sum_probs=110.6
Q ss_pred HHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEecCCCccccCCCccc------------ccCCCcccchhhhcCC
Q 001034 984 QCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCS------------YVQSRSYRAPEVILGL 1050 (1182)
Q Consensus 984 QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~~~ss------------~vGTp~YmAPEVLlg~ 1050 (1182)
+++.||.|+|. .++||+.|.|++|.++ ..+..||+.|+++......... ......|.|||++...
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~n--a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVN--ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCcceeecccchhheeec--cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 45589999995 6899999999999999 4778999999987543331111 1225679999999998
Q ss_pred CCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcc
Q 001034 1051 SYDKKIDIWSLGCILAELC-TGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLI 1129 (1182)
Q Consensus 1051 ~yS~kSDIWSLGVILYELL-TGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~li 1129 (1182)
..+.++|+|||||++|.+. .|+..|........+..-. ..+.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~-~~~~------------------------------------ 227 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR-NLLN------------------------------------ 227 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh-cccc------------------------------------
Confidence 8889999999999999999 5665554433211111110 0000
Q ss_pred ccccccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCCC
Q 001034 1130 PKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHPY 1177 (1182)
Q Consensus 1130 Pk~~sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~~ 1177 (1182)
.........+++++++=|.++|..++..||++.+++..|||+++-
T Consensus 228 ---~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~ 272 (700)
T KOG2137|consen 228 ---AGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG 272 (700)
T ss_pred ---cccccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence 000111245678999999999999999999999999999999863
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.54 E-value=1.6e-06 Score=96.26 Aligned_cols=133 Identities=14% Similarity=0.072 Sum_probs=90.1
Q ss_pred EEEEEECCCCcEEEEEEEeccch--hh----------HHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe-----cCeEE
Q 001034 885 AIQAHDLHTGMDVCVKIIKNNKD--FF----------DQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY-----REHLL 947 (1182)
Q Consensus 885 VyLAkDk~TGr~VAVKIIkk~k~--~~----------dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd-----~e~Ly 947 (1182)
|+++. ..|+.|.||....... .. ....+|...+..+.... .. .+.+..++.. ...-+
T Consensus 38 vvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~G-Ip---tP~pVa~~e~~~~~~~~~s~ 111 (268)
T PRK15123 38 TLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVG-VD---TMTGVAFGERGSNPATRTSF 111 (268)
T ss_pred EEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcC-CC---CCCeeEEEEecCCCccceeE
Confidence 44443 3567788886643221 01 13678888888886552 12 2233333332 23578
Q ss_pred EEEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEcc-----CCCceEEEe
Q 001034 948 IVCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKS-----YSRCEVKVI 1020 (1182)
Q Consensus 948 LVmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs-----~~dG~IKLi 1020 (1182)
||||++++ +|.+++..... ..........++.+|+..+.-||..||+|+|+++.|||++. .+...+.||
T Consensus 112 LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LI 187 (268)
T PRK15123 112 IITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVI 187 (268)
T ss_pred EEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEE
Confidence 99999997 46666642211 11455667789999999999999999999999999999984 235689999
Q ss_pred cCCCccc
Q 001034 1021 DLGSSCF 1027 (1182)
Q Consensus 1021 DFGLA~~ 1027 (1182)
||+.+..
T Consensus 188 Dl~r~~~ 194 (268)
T PRK15123 188 DLHRAQI 194 (268)
T ss_pred ECCcccc
Confidence 9998753
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.21 E-value=1.6e-05 Score=84.30 Aligned_cols=108 Identities=20% Similarity=0.244 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec----CeEEEEEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHH
Q 001034 910 DQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR----EHLLIVCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITI 983 (1182)
Q Consensus 910 dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~----e~LyLVmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~ 983 (1182)
....+|...+..+..... .+++++.+.... ...+||+|++++ +|.+++..... ........++.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi----~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~ 125 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGI----PTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLR 125 (206)
T ss_pred hHHHHHHHHHHHHHHcCC----CCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHH
Confidence 456778888777765431 233444444432 245899999997 46666654221 34556788999
Q ss_pred HHHHHHHHHHhcCccccccCCccEEEccCC-CceEEEecCCCccc
Q 001034 984 QCLEALQFLHGLGLIHCDLKPENILVKSYS-RCEVKVIDLGSSCF 1027 (1182)
Q Consensus 984 QILsALeYLHS~GIIHRDIKPeNILIDs~~-dG~IKLiDFGLA~~ 1027 (1182)
+++..+.-||..||+|+|+++.|||++... ...+.|+||+.+..
T Consensus 126 ~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 126 ALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999999999999999999999999632 34799999998765
No 452
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.21 E-value=5.3e-06 Score=92.60 Aligned_cols=137 Identities=19% Similarity=0.158 Sum_probs=97.9
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccc-------------------h----hhHHHHHHHHHHHHhcCCCC
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-------------------D----FFDQSLDEIKLLKYVNKHDP 927 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-------------------~----~~dq~l~EikILr~L~h~~~ 927 (1182)
+.|...||-|--|.||.|.+ ..|..+|||..+... . ......+|.++|.+|....
T Consensus 93 e~iG~~IGvGKEsdVY~~~~-~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G- 170 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAID-PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG- 170 (304)
T ss_pred HhhccccccCccceEEEEEC-CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC-
Confidence 56778999999999999997 479999999876321 1 1223557888888886541
Q ss_pred CCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccE
Q 001034 928 GDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENI 1007 (1182)
Q Consensus 928 l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNI 1007 (1182)
..+.+.++ -+.-++|||++.|-.+--+. +....+..++..|+.-+.-+-..||||+|+++-||
T Consensus 171 ---~~VP~P~~----~nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNI 233 (304)
T COG0478 171 ---VKVPKPIA----WNRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNI 233 (304)
T ss_pred ---CCCCCccc----cccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheE
Confidence 13555544 24567999999984332111 22334555666677666666699999999999999
Q ss_pred EEccCCCceEEEecCCCcccc
Q 001034 1008 LVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 1008 LIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
|++. +|.+.++||-.+...
T Consensus 234 lV~~--dg~~~vIDwPQ~v~~ 252 (304)
T COG0478 234 LVTE--DGDIVVIDWPQAVPI 252 (304)
T ss_pred EEec--CCCEEEEeCcccccC
Confidence 9994 778999999776543
No 453
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.09 E-value=3e-05 Score=84.64 Aligned_cols=146 Identities=15% Similarity=0.216 Sum_probs=94.6
Q ss_pred eeCceecCCEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHH----------HHHHHHHHHHhcCC--CCCC
Q 001034 862 VLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQ----------SLDEIKLLKYVNKH--DPGD 929 (1182)
Q Consensus 862 ~ig~iL~drYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq----------~l~EikILr~L~h~--~~l~ 929 (1182)
....++.+.|.+++++-......|.+.. -+|..+++|..+......++ ..+.+..+..+... ....
T Consensus 24 l~~~i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~ 101 (229)
T PF06176_consen 24 LGEKILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPA 101 (229)
T ss_pred HHHHHHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccc
Confidence 3445678899999999998888888875 57789999998754211111 12233333333221 1111
Q ss_pred CcceEEEEEEEEecCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEE
Q 001034 930 KYHLLRLYDYFYYREHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENIL 1008 (1182)
Q Consensus 930 HPnIVkL~dsFqd~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNIL 1008 (1182)
-+.++...-.+......+|||||++|- |.++.. +++ .++..|+.+|.-||+.|+.|+|+.|.|++
T Consensus 102 ~~yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFl 167 (229)
T PF06176_consen 102 DPYLAAEKKIFRYTSSYVLLMEYIEGVELNDIED----------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFL 167 (229)
T ss_pred cceeeeeeeeccceeEEEEEEEEecCeecccchh----------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEE
Confidence 223443334444445667999999984 332211 222 24456778899999999999999999999
Q ss_pred EccCCCceEEEecCCCcc
Q 001034 1009 VKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 1009 IDs~~dG~IKLiDFGLA~ 1026 (1182)
+. ++.++++||+..+
T Consensus 168 v~---~~~i~iID~~~k~ 182 (229)
T PF06176_consen 168 VS---NNGIRIIDTQGKR 182 (229)
T ss_pred EE---CCcEEEEECcccc
Confidence 98 3449999997643
No 454
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.05 E-value=6.3e-05 Score=83.38 Aligned_cols=139 Identities=19% Similarity=0.215 Sum_probs=94.7
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccchhh-------------------------HHHHHHHHHHHHhcCCCCCC
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFF-------------------------DQSLDEIKLLKYVNKHDPGD 929 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~-------------------------dq~l~EikILr~L~h~~~l~ 929 (1182)
-.|..|--+.||+|.. ..+..+|+|+++.....+ .=...|..-|+++....
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAG--- 129 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAG--- 129 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcC---
Confidence 3778899999999974 678999999997532111 11234666666665431
Q ss_pred CcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEE
Q 001034 930 KYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENIL 1008 (1182)
Q Consensus 930 HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNIL 1008 (1182)
-.+.+.+.++ +-.|||||++.... ..+.-.+..+....+..+..+++..+.-|-. .++||+||+.-|||
T Consensus 130 -VrvP~Pi~~~----~nVLvMEfIg~~g~-----pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL 199 (268)
T COG1718 130 -VRVPEPIAFR----NNVLVMEFIGDDGL-----PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNIL 199 (268)
T ss_pred -CCCCCceeec----CCeEEEEeccCCCC-----CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheE
Confidence 1344555543 34699999984311 0011112224444677788899998888876 99999999999999
Q ss_pred EccCCCceEEEecCCCccccCC
Q 001034 1009 VKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 1009 IDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
+. .+.+.|||||.|.....
T Consensus 200 ~~---~~~p~iID~~QaV~~~h 218 (268)
T COG1718 200 VH---DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred EE---CCeEEEEECccccccCC
Confidence 98 56799999999976553
No 455
>PRK09902 hypothetical protein; Provisional
Probab=97.99 E-value=0.00014 Score=79.09 Aligned_cols=141 Identities=15% Similarity=0.109 Sum_probs=96.8
Q ss_pred ccCCceEEEEEEECCCCcEEEEEEEecc-------chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec--CeEEE
Q 001034 878 GSAAFSKAIQAHDLHTGMDVCVKIIKNN-------KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR--EHLLI 948 (1182)
Q Consensus 878 GkGaFGeVyLAkDk~TGr~VAVKIIkk~-------k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~--e~LyL 948 (1182)
|+||.|-|+.... .|+.+-+|.-.+. +.-...+.+|+..|..+...... -|-++ +...-... -..+|
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP-VP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI-VPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC-CCccc-eeeeeccCCceEEEE
Confidence 7799999998763 3446777765421 22346788999999999876421 22233 11111111 24789
Q ss_pred EEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 949 VCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 949 VmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
|+|-++| +|.+++...... ..+......++.+|+.+|.-||..|+.|+|+-+.|||++..+...|+++||.-++
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~----~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVS----PYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcC----CcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 9999985 666665332111 2456666789999999999999999999999999999985444469999998654
No 456
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.94 E-value=0.00026 Score=72.77 Aligned_cols=76 Identities=11% Similarity=0.102 Sum_probs=54.5
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe---cCeEEEEE
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY---REHLLIVC 950 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd---~e~LyLVm 950 (1182)
++.|+.|..+.||++.... ..+++|+.... ........|..+++.+..... -+.+++..... ....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~----pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI----PVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS----BS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC----CCceEEeecccccccccceEEE
Confidence 4688999999999998644 58999998766 455677788899888876532 24455543322 34579999
Q ss_pred EecccC
Q 001034 951 ELLKAN 956 (1182)
Q Consensus 951 EyL~Gs 956 (1182)
+++.|.
T Consensus 75 ~~i~g~ 80 (239)
T PF01636_consen 75 EYIPGR 80 (239)
T ss_dssp EEESSE
T ss_pred EEeccc
Confidence 999875
No 457
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=97.92 E-value=5.3e-05 Score=88.40 Aligned_cols=191 Identities=14% Similarity=0.096 Sum_probs=123.5
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcc----eEE----EEEEEEecCe
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYH----LLR----LYDYFYYREH 945 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPn----IVk----L~dsFqd~e~ 945 (1182)
...||+|+-+.+|-.-. -...+.|++.....-. ...-+..|.... .||- |+- |++-- ....
T Consensus 16 gr~LgqGgea~ly~l~e---~~d~VAKIYh~Pppa~--~aqk~a~la~~p-----~~p~~~~rvaWPqa~L~G~~-~~~~ 84 (637)
T COG4248 16 GRPLGQGGEADLYTLGE---VRDQVAKIYHAPPPAA--QAQKVAELAATP-----DAPLLNYRVAWPQATLHGGR-RGKV 84 (637)
T ss_pred CccccCCccceeeecch---hhchhheeecCCCchH--HHHHHHHhccCC-----CCcchhhhhcccHHHhhCCC-ccce
Confidence 35789999999997642 2233558887654221 111222222221 2221 111 11110 1123
Q ss_pred EEEEEEeccc--ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCC
Q 001034 946 LLIVCELLKA--NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLG 1023 (1182)
Q Consensus 946 LyLVmEyL~G--sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFG 1023 (1182)
..++|..++| ...+++.-......--.+.+.-+.+.++.|+.|...||..|.+-+|+.++|+|+.. .+.+.|+|=.
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd--~~~V~LVdsD 162 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSD--DSKVVLVDSD 162 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeec--CceEEEEccc
Confidence 7788998886 44444432211111112667778888999999999999999999999999999984 7778988765
Q ss_pred CccccCC--CcccccCCCcccchhhhc-----CCCCCchhhHHHHHHHHHHHHhC-CCCCCC
Q 001034 1024 SSCFETD--HLCSYVQSRSYRAPEVIL-----GLSYDKKIDIWSLGCILAELCTG-NVLFQN 1077 (1182)
Q Consensus 1024 LA~~~~~--~~ss~vGTp~YmAPEVLl-----g~~yS~kSDIWSLGVILYELLTG-r~PF~g 1077 (1182)
.-..... ...-.+|...|.+||.-. +..-+...|.|.||+++|++|.| +.||.+
T Consensus 163 sfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG 224 (637)
T COG4248 163 SFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG 224 (637)
T ss_pred ceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence 4332221 123357889999999864 44566789999999999999996 999976
No 458
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.74 E-value=0.00035 Score=75.61 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=53.5
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecc
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLK 954 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~ 954 (1182)
..||.|..+.||+. .+..+++|+.+... ......+|.++++.+.... . -+.+.+.+.......++||+++.
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~g-l---pvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLG-I---PTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcC-C---CCCceEEEEecCCeeeeeeeecC
Confidence 47899999999984 25567889887543 3345688999999887442 1 24566666667777899999999
Q ss_pred cC
Q 001034 955 AN 956 (1182)
Q Consensus 955 Gs 956 (1182)
|.
T Consensus 78 G~ 79 (226)
T TIGR02172 78 GK 79 (226)
T ss_pred Cc
Confidence 84
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.62 E-value=0.00065 Score=72.76 Aligned_cols=72 Identities=8% Similarity=0.045 Sum_probs=50.4
Q ss_pred EeccCCc-eEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecc
Q 001034 876 YLGSAAF-SKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLK 954 (1182)
Q Consensus 876 ~LGkGaF-GeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~ 954 (1182)
.|-.|.. +.||++.. .+..+++|+..... ......|+.+++.+... . -+.+++.+.......++||++++
T Consensus 5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~--~---~vP~v~~~~~~~~~~~lv~e~i~ 75 (244)
T cd05150 5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP--TYELEREAERLRWLAGK--L---PVPEVIDYGSDDGRAWLLTSAVP 75 (244)
T ss_pred ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc--ccchHHHHHHHHHHHhc--C---CCCeEEEEEecCCccEEEEEeeC
Confidence 3445555 78899864 34678889886543 34566899998888644 1 25667776666667899999998
Q ss_pred cC
Q 001034 955 AN 956 (1182)
Q Consensus 955 Gs 956 (1182)
|.
T Consensus 76 G~ 77 (244)
T cd05150 76 GV 77 (244)
T ss_pred Cc
Confidence 84
No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.56 E-value=0.00039 Score=84.04 Aligned_cols=144 Identities=20% Similarity=0.269 Sum_probs=84.5
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc-----------------------------------hhhHHHHH-----
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-----------------------------------DFFDQSLD----- 914 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-----------------------------------~~~dq~l~----- 914 (1182)
+.|+.++-|+||+|+- .+|+.||||+.+..- ........
T Consensus 131 ~PiAsASIaQVH~A~L-~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVL-KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEe-cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 3689999999999995 569999999987431 00011111
Q ss_pred -HHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHH-HHH
Q 001034 915 -EIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEA-LQF 991 (1182)
Q Consensus 915 -EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsA-LeY 991 (1182)
|..-+.++...-. ..++|.-..-+......-.|+|||+.|- +.+...... .+ +... .++..++.+ +.-
T Consensus 210 ~EA~n~~~~~~nf~-~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g----~d~k---~ia~~~~~~f~~q 280 (517)
T COG0661 210 REAANAERFRENFK-DDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AG----IDRK---ELAELLVRAFLRQ 280 (517)
T ss_pred HHHHHHHHHHHHcC-CCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cC----CCHH---HHHHHHHHHHHHH
Confidence 2222222222100 2223333223333456678999999983 333322221 11 3322 233333322 333
Q ss_pred HHhcCccccccCCccEEEccCCCceEEEecCCCccccCC
Q 001034 992 LHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETD 1030 (1182)
Q Consensus 992 LHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~~ 1030 (1182)
+-..|++|.|.+|.||++.. +|.+.+.|||.......
T Consensus 281 ~~~dgffHaDpHpGNi~v~~--~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 281 LLRDGFFHADPHPGNILVRS--DGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHhcCccccCCCccceEEec--CCcEEEEcCcceecCCH
Confidence 44589999999999999995 68899999998765443
No 461
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.56 E-value=0.0014 Score=70.52 Aligned_cols=134 Identities=20% Similarity=0.319 Sum_probs=96.6
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc-----------------hhhHHHHHHHHHHHHhcCCCCCCCcceEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK-----------------DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY 937 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k-----------------~~~dq~l~EikILr~L~h~~~l~HPnIVkL~ 937 (1182)
..||+|+.-.||.- ......+||++.... ....+..+|+.....+.......+.+|.++|
T Consensus 7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 36899999888874 455668999987655 2346677888777777633345667899999
Q ss_pred EEEEecCeEEEEEEecc---c----ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEc
Q 001034 938 DYFYYREHLLIVCELLK---A----NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVK 1010 (1182)
Q Consensus 938 dsFqd~e~LyLVmEyL~---G----sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILID 1010 (1182)
++.+.+..+.+|+|.+. | +|.+++.... ++. . +...+-.-..||-+.+|+.+||+|.||++.
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-------~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~ 152 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-------LTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVVQ 152 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-------ccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEEE
Confidence 99999999999999975 3 4555553221 343 2 333444556788899999999999999998
Q ss_pred cCCCc--eEEEecC
Q 001034 1011 SYSRC--EVKVIDL 1022 (1182)
Q Consensus 1011 s~~dG--~IKLiDF 1022 (1182)
....+ .+.|+|-
T Consensus 153 ~~~~~~~~lvlIDG 166 (199)
T PF10707_consen 153 RRDSGEFRLVLIDG 166 (199)
T ss_pred ecCCCceEEEEEeC
Confidence 65544 4778873
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.52 E-value=0.00074 Score=81.89 Aligned_cols=144 Identities=18% Similarity=0.225 Sum_probs=87.3
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccc--------------------------------hhhHHHHHHHHH----
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK--------------------------------DFFDQSLDEIKL---- 918 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k--------------------------------~~~dq~l~EikI---- 918 (1182)
+.|+..+.|+|++|+-+ +|+.||||+-+..- ........|+..
T Consensus 167 ~piaaASlaQVhrA~L~-~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLK-NGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEec-CCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 47899999999999964 49999999976421 001111222222
Q ss_pred ------HHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc---ChHHHHhhhcccCCccccCHHHHHHHHHHHHHH-
Q 001034 919 ------LKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA---NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEA- 988 (1182)
Q Consensus 919 ------Lr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G---sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsA- 988 (1182)
.+.+.+.+...--.|.++|-.+ ...-.|+||||.| +..+.+.... ++...+ +..+..+
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~g-------i~~~~i---~~~l~~~~ 313 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKRG-------ISPHDI---LNKLVEAY 313 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHcC-------CCHHHH---HHHHHHHH
Confidence 2223222200111244444333 3456799999998 4455555443 333333 3333333
Q ss_pred HHHHHhcCccccccCCccEEEccC--CCceEEEecCCCccccCCC
Q 001034 989 LQFLHGLGLIHCDLKPENILVKSY--SRCEVKVIDLGSSCFETDH 1031 (1182)
Q Consensus 989 LeYLHS~GIIHRDIKPeNILIDs~--~dG~IKLiDFGLA~~~~~~ 1031 (1182)
++-|-..|++|+|-+|.||++.+. +.+.+.|.|||+.......
T Consensus 314 ~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 314 LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 223335689999999999999953 4678999999998765544
No 463
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.51 E-value=0.0011 Score=71.95 Aligned_cols=129 Identities=19% Similarity=0.280 Sum_probs=93.8
Q ss_pred CCEEEEEEeccCCc-eEEEEEEECCCCcEEEEEEEec----------------cc------hhhHHHHHHHHHHHHhcCC
Q 001034 869 GRYHVTEYLGSAAF-SKAIQAHDLHTGMDVCVKIIKN----------------NK------DFFDQSLDEIKLLKYVNKH 925 (1182)
Q Consensus 869 drYeIlk~LGkGaF-GeVyLAkDk~TGr~VAVKIIkk----------------~k------~~~dq~l~EikILr~L~h~ 925 (1182)
..++.++.||.|.- |.||+++ -.|+.||+|+++. .. .+...+..|.++..+|...
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 78999999999999 9999997 5788999999431 00 2345677899998888765
Q ss_pred CCCCCcceEEEEEEEEec------------------CeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHH
Q 001034 926 DPGDKYHLLRLYDYFYYR------------------EHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLE 987 (1182)
Q Consensus 926 ~~l~HPnIVkL~dsFqd~------------------e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILs 987 (1182)
.. .+-+-|++++++.-. ....||.||+...- .+... =+.+|++
T Consensus 115 ~~-e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~~~~~----~~~~~~~ 175 (207)
T PF13095_consen 115 GR-EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------PLQIR----DIPQMLR 175 (207)
T ss_pred cc-cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------ccchh----HHHHHHH
Confidence 31 111249999987433 12367888775322 02222 3457788
Q ss_pred HHHHHHhcCccccccCCccEEEccCCCceEEEecCCCc
Q 001034 988 ALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSS 1025 (1182)
Q Consensus 988 ALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA 1025 (1182)
-|..+|..||+-+|+++.|.. + -||+|||.+
T Consensus 176 dl~~~~k~gI~~~Dv~~~ny~-~------G~lvDfs~~ 206 (207)
T PF13095_consen 176 DLKILHKLGIVPRDVKPRNYR-G------GKLVDFSSS 206 (207)
T ss_pred HHHHHHHCCeeeccCcccccc-C------CEEEecccC
Confidence 889999999999999999987 2 389999864
No 464
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.40 E-value=0.0017 Score=68.85 Aligned_cols=73 Identities=16% Similarity=0.263 Sum_probs=48.0
Q ss_pred EEEeccCCceEEEEEEECC-CCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 874 TEYLGSAAFSKAIQAHDLH-TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~-TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
++.|..|-...+|++.... .+..|++|+.............|..+++.+.... ..++++..+. -.+||||
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~g-----l~P~v~~~~~----~~~l~e~ 73 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHG-----LAPKLYATFQ----NGLIYEF 73 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCC-----CCCeEEEEeC----CcEEEEe
Confidence 3567888888999997433 3578999987654333233457888888886543 2344444432 2489999
Q ss_pred ccc
Q 001034 953 LKA 955 (1182)
Q Consensus 953 L~G 955 (1182)
+.|
T Consensus 74 i~G 76 (235)
T cd05157 74 IPG 76 (235)
T ss_pred eCC
Confidence 887
No 465
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.38 E-value=3.7e-05 Score=93.16 Aligned_cols=184 Identities=18% Similarity=0.094 Sum_probs=134.7
Q ss_pred EEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEE
Q 001034 872 HVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCE 951 (1182)
Q Consensus 872 eIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmE 951 (1182)
.....+++++++++++.+...+...+ .+.+... ....-++++|.++++++ -.+..++.++-..++.|+|+
T Consensus 245 ~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~P~-----~~v~~~~d~~~E~~~~i~~~ 314 (829)
T KOG0576|consen 245 EFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNNPN-----PVVRYLEDYDGEDYLWIPMR 314 (829)
T ss_pred HHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccCCC-----CcccccccCCcccccchhhh
Confidence 33445789999999999876665544 5655433 23445778888888763 16666777777788999999
Q ss_pred ecccC--hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCccEEEccCCCceEEEecCCCccccC
Q 001034 952 LLKAN--LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 952 yL~Gs--Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
++.++ ...... ..+..+...+...+.+.-+.+|++||+.--+|+| ||+.. .+..++.+|+....+.
T Consensus 315 i~s~~rs~~~~~~-----~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s---~~~~~~~~~~v~~~L~ 382 (829)
T KOG0576|consen 315 ICSTGRSSALEMT-----VSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS---EEEVKLLDFAVPPQLT 382 (829)
T ss_pred hhcCCccccccCC-----hhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc---ccccccccccCCcccC
Confidence 99854 111110 1112244445555666677889999998778998 88877 4668999999887665
Q ss_pred CC--cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001034 1030 DH--LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQN 1077 (1182)
Q Consensus 1030 ~~--~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF~g 1077 (1182)
.. .++..+++.++|||+.....+....|.|++|+--.+|.-|-+|-.+
T Consensus 383 ~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 383 RTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred cccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 55 6778899999999999999999999999999877778888887655
No 466
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.33 E-value=0.0012 Score=70.71 Aligned_cols=72 Identities=15% Similarity=0.036 Sum_probs=44.0
Q ss_pred EEeccCCce-EEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---CeEEEEE
Q 001034 875 EYLGSAAFS-KAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR---EHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFG-eVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~---e~LyLVm 950 (1182)
+.|+.|+.. .||++. ..+++|+.+... .......|.++|+.+........|. ++...... ...++||
T Consensus 3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~-~~~~~~~E~~~l~~L~~~~~v~vP~---~~~~~~~~~~~~~~~~l~ 73 (235)
T cd05155 3 EPVDSGGTDNATFRLG-----DDMSVRLPSAAG-YAGQVRKEQRWLPRLAPHLPLPVPE---PLGKGEPGEGYPWPWSVY 73 (235)
T ss_pred eeccCCCcccceEEcC-----CceEEEcCCccc-hHHHHHHHHHHHHHHhccCCCCCCc---eeecCCCccCCCcceEEE
Confidence 456767776 488762 357788765432 3457788999999887532223333 33322221 2358899
Q ss_pred Eeccc
Q 001034 951 ELLKA 955 (1182)
Q Consensus 951 EyL~G 955 (1182)
++++|
T Consensus 74 ~~i~G 78 (235)
T cd05155 74 RWLEG 78 (235)
T ss_pred EeecC
Confidence 99887
No 467
>PLN02876 acyl-CoA dehydrogenase
Probab=97.32 E-value=0.0018 Score=82.10 Aligned_cols=80 Identities=11% Similarity=0.098 Sum_probs=54.0
Q ss_pred EEEeccCCceEEEEEEECCCC--cEEEEEEEeccc--hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEec---CeE
Q 001034 874 TEYLGSAAFSKAIQAHDLHTG--MDVCVKIIKNNK--DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYR---EHL 946 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TG--r~VAVKIIkk~k--~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~---e~L 946 (1182)
++.|+.|.+..+|++.....+ ..+++|+..... .....+.+|.++++.+...... -+.+++.++.+. ...
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~v---pVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDV---PVPKVYCLCTDASVIGTA 119 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCC---CCCcEEEEecCCCcCCCc
Confidence 467899999999998754332 467777765432 1224577899999998632111 246666666554 467
Q ss_pred EEEEEecccC
Q 001034 947 LIVCELLKAN 956 (1182)
Q Consensus 947 yLVmEyL~Gs 956 (1182)
|+||||+.|.
T Consensus 120 flVME~v~G~ 129 (822)
T PLN02876 120 FYIMEYLEGR 129 (822)
T ss_pred eEEEEecCCc
Confidence 8999999874
No 468
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.07 E-value=0.0094 Score=77.03 Aligned_cols=195 Identities=24% Similarity=0.296 Sum_probs=123.9
Q ss_pred HHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE----Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHH
Q 001034 914 DEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC----ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEA 988 (1182)
Q Consensus 914 ~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm----EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsA 988 (1182)
.|+..+..+.|. |++.++.+-.......+++ +++.. .+...+..- ...+....+.+..+++.+
T Consensus 231 ~e~~~l~k~~~~------n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v------~~i~~~~~r~~~~~~~~G 298 (1351)
T KOG1035|consen 231 IELESLSKIAHD------NLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSV------GSIPLETLRILHQKLLEG 298 (1351)
T ss_pred HHHHHHHhhccc------cccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhc------cccCHHHHHHHHHHHhhh
Confidence 344555555444 7888877765543333333 44443 233222221 127788889999999999
Q ss_pred HHHHHhcCccccccCCc---cEEEccCCCceEEEe--cCCCccccCCCcc--cccCCCcccchhhhcCCCCCc--hhhHH
Q 001034 989 LQFLHGLGLIHCDLKPE---NILVKSYSRCEVKVI--DLGSSCFETDHLC--SYVQSRSYRAPEVILGLSYDK--KIDIW 1059 (1182)
Q Consensus 989 LeYLHS~GIIHRDIKPe---NILIDs~~dG~IKLi--DFGLA~~~~~~~s--s~vGTp~YmAPEVLlg~~yS~--kSDIW 1059 (1182)
|.|+|+....|.-|... +..++ +.+.+.++ ||+.+........ ....+..+.|||......+.. ..|+|
T Consensus 299 L~~~h~~~l~~v~L~~s~~~~~~~~--~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 299 LAYLHSLSLEHVVLSASSSKESTVD--GEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred HHHHHHhccceeEEecccccccccC--ccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHH
Confidence 99999986666555444 22223 34555655 9988876554433 334466688888887665554 47999
Q ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhccccccccccCC
Q 001034 1060 SLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRL 1139 (1182)
Q Consensus 1060 SLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~sL~~~l 1139 (1182)
++|.++..+..|..+-... . .+..++
T Consensus 377 ~lgll~~~~~~~~~i~~~~---~-----------~~~~~l---------------------------------------- 402 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKS---A-----------VPVSLL---------------------------------------- 402 (1351)
T ss_pred HHHHHHhhhhhcCcccccc---c-----------chhhhh----------------------------------------
Confidence 9999999999876432100 0 000000
Q ss_pred CCCc-HHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1140 PMGD-QGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1140 ~~~S-eeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
+... ..+.+++.+|+.-++++|+++.++|.|||.+-+
T Consensus 403 ~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 403 DVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFP 440 (1351)
T ss_pred ccccchhhhhhhhhhcchhhhhccchhhhhhchhcccc
Confidence 0001 156788999999999999999999999998754
No 469
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.88 E-value=0.0091 Score=69.85 Aligned_cols=139 Identities=20% Similarity=0.292 Sum_probs=94.0
Q ss_pred EEEEeccCCceEEEEEEECCCCcEEEEEEEeccc---------------------------hhhHHHHHHHHHHHHhcCC
Q 001034 873 VTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNK---------------------------DFFDQSLDEIKLLKYVNKH 925 (1182)
Q Consensus 873 Ilk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k---------------------------~~~dq~l~EikILr~L~h~ 925 (1182)
|-.+|..|--+.||.|.. .+|..+||||++..- +..-=...|++-|.+++..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 445789999999999984 778889999986320 0001122456666666644
Q ss_pred C-CCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHH-hcCccccccC
Q 001034 926 D-PGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLH-GLGLIHCDLK 1003 (1182)
Q Consensus 926 ~-~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLH-S~GIIHRDIK 1003 (1182)
. ++..|.+++ .-.|||+|++.+-...=+ -....++...+..+-.|++.-+.-|- .+++||.||.
T Consensus 227 GIP~PePIlLk---------~hVLVM~FlGrdgw~aPk-----LKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLS 292 (520)
T KOG2270|consen 227 GIPCPEPILLK---------NHVLVMEFLGRDGWAAPK-----LKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLS 292 (520)
T ss_pred CCCCCCceeee---------cceEeeeeccCCCCcCcc-----cccccCChHHHHHHHHHHHHHHHHHHHHhceeccchh
Confidence 2 223334443 235999999853221111 11223677778888888888888774 6899999999
Q ss_pred CccEEEccCCCceEEEecCCCccccC
Q 001034 1004 PENILVKSYSRCEVKVIDLGSSCFET 1029 (1182)
Q Consensus 1004 PeNILIDs~~dG~IKLiDFGLA~~~~ 1029 (1182)
--|+|+. .|.+.|||.+.+.-..
T Consensus 293 EfN~Lyh---dG~lyiIDVSQSVE~D 315 (520)
T KOG2270|consen 293 EFNLLYH---DGKLYIIDVSQSVEHD 315 (520)
T ss_pred hhhheEE---CCEEEEEEccccccCC
Confidence 9999998 6889999999886443
No 470
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.87 E-value=0.0065 Score=67.29 Aligned_cols=72 Identities=8% Similarity=0.106 Sum_probs=48.1
Q ss_pred EEeccCCceEEEEEEECC------CCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 875 EYLGSAAFSKAIQAHDLH------TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~------TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
+.|..|--..||++.... +++.|++|+.............|.+++..+.... -..+++.++.. .+
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g-----~~P~~~~~~~~----~~ 74 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERN-----LGPKLYGIFPN----GR 74 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCC-----CCCceEEEeCC----Cc
Confidence 456667677888887432 3678999998765444456678999999887653 13445555532 36
Q ss_pred EEEeccc
Q 001034 949 VCELLKA 955 (1182)
Q Consensus 949 VmEyL~G 955 (1182)
|++|+.|
T Consensus 75 v~e~i~G 81 (302)
T cd05156 75 IEEFIPS 81 (302)
T ss_pred hhheeCC
Confidence 8898876
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.73 E-value=0.0076 Score=65.44 Aligned_cols=137 Identities=13% Similarity=0.150 Sum_probs=75.1
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccchhh-HHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFF-DQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA 955 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~-dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G 955 (1182)
+..|-.+.+|++. .++..+++|+........ -....|..+++.+..... .|. ++..+. -++||+|++|
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~--~P~---~i~~~~----~~~v~e~i~G 72 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL--APK---PILVNE----HWLLVEWLEG 72 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC--CCc---eEEEeC----CEEEEEeccC
Confidence 4567777889886 456788899865443222 235678899998876431 233 333321 3689999987
Q ss_pred ChHH---------------HHh-hhcccCCccccCH-HHHHHHHHHH---------HHHHHHHHh--------cCccccc
Q 001034 956 NLYE---------------FHK-FNRESGGEVYFTM-PRLQSITIQC---------LEALQFLHG--------LGLIHCD 1001 (1182)
Q Consensus 956 sLld---------------~Lk-~~~~sggel~Lse-~eIr~Ia~QI---------LsALeYLHS--------~GIIHRD 1001 (1182)
.... .+. ..........+.. ..+..+..++ ...+..+-. ..++|+|
T Consensus 73 ~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~D 152 (256)
T TIGR02721 73 EVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMD 152 (256)
T ss_pred cccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCC
Confidence 3221 111 1100000011111 1112221111 111222211 2589999
Q ss_pred cCCccEEEccCCCceEEEecCCCccc
Q 001034 1002 LKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 1002 IKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+.|.|||++. ++ +.|+||..+..
T Consensus 153 l~~~Nil~~~--~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 153 VHAYNLVVTP--QG-LKLIDWEYASD 175 (256)
T ss_pred CCcCcEEEeC--CC-CEEEeccccCc
Confidence 9999999984 33 78999988754
No 472
>PRK05231 homoserine kinase; Provisional
Probab=96.71 E-value=0.028 Score=62.81 Aligned_cols=77 Identities=4% Similarity=-0.064 Sum_probs=45.6
Q ss_pred EEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEE---EEEEecCeEEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY---DYFYYREHLLIVCE 951 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~---dsFqd~e~LyLVmE 951 (1182)
+.|..|....+|++.. ..| .+++|++.. ........+..+++.|.... ...|.++... .+.......++||+
T Consensus 28 ~~l~~G~~n~~y~v~t-~~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~g-lpvP~~i~~~~G~~~~~~~g~~~~l~~ 102 (319)
T PRK05231 28 KGIAEGIENSNFFLTT-TQG-EYVLTLFER--LTAEDLPFFLGLMQHLAARG-VPVPAPVARRDGAALGELAGKPAAIVT 102 (319)
T ss_pred chhccccccceEEEEe-CCC-cEEEEEecc--CChHHhHHHHHHHHHHHHCC-CCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence 3567788889999874 333 688998862 12234445667777775432 2233333211 11233566899999
Q ss_pred ecccC
Q 001034 952 LLKAN 956 (1182)
Q Consensus 952 yL~Gs 956 (1182)
+++|.
T Consensus 103 ~l~G~ 107 (319)
T PRK05231 103 FLEGK 107 (319)
T ss_pred ecCCC
Confidence 99874
No 473
>PRK10593 hypothetical protein; Provisional
Probab=96.68 E-value=0.033 Score=62.79 Aligned_cols=77 Identities=10% Similarity=0.096 Sum_probs=52.9
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEe---cCeEEEEE
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYY---REHLLIVC 950 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd---~e~LyLVm 950 (1182)
.+.||.|..+.||+... ..+ .+++|..+.. .....+..|...|+.+...... .+.++++++.+ ....+|||
T Consensus 19 ~~~i~~G~~~~vy~~~~-~~~-~~~~k~~~~~-~~~~~~~~Ea~~L~~L~~~~~v---pVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 19 VECISEQPYAALWALYD-SQG-NPMPLMARSF-STPGVAQQEAWKLSMLARSGTV---RMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred eeecCCccceeEEEEEc-CCC-CEEEEEeccc-ccchHHHHHHHHHHHHccCCCC---CcCcEEEEeccCCcCCCeEEEE
Confidence 45789999999999963 223 4777875431 1235778899999988754222 35666666543 36689999
Q ss_pred EecccC
Q 001034 951 ELLKAN 956 (1182)
Q Consensus 951 EyL~Gs 956 (1182)
|++.|.
T Consensus 93 E~i~G~ 98 (297)
T PRK10593 93 ERLRGV 98 (297)
T ss_pred eccCCE
Confidence 999863
No 474
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.67 E-value=0.0094 Score=63.95 Aligned_cols=134 Identities=20% Similarity=0.215 Sum_probs=88.7
Q ss_pred EEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 871 YHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 871 YeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
-++.+.|++|.+|.||++. ..|..+|+|+-+.+. ....+..|.++|..++... .-.++|.+- .-++.|
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr~ds-~r~~l~kEakiLeil~g~~-----~~p~vy~yg----~~~i~m 91 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGE--WRGGEVALKVRRRDS-PRRNLEKEAKILEILAGEG-----VTPEVYFYG----EDFIRM 91 (201)
T ss_pred hhhhhhhhcccccEEEEee--ccCceEEEEEecCCc-chhhHHHHHHHHHHhhhcC-----CCceEEEec----hhhhhh
Confidence 3456789999999999997 567799999877654 3466778999999887653 233454443 334669
Q ss_pred Eeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccC-CccEEEccCCCceEEEecCCCcccc
Q 001034 951 ELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLK-PENILVKSYSRCEVKVIDLGSSCFE 1028 (1182)
Q Consensus 951 EyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIK-PeNILIDs~~dG~IKLiDFGLA~~~ 1028 (1182)
||+.| .|.....- .. +.-+..++.+---|-.+||-|+.|. |..++|.. +..+.||||..|++.
T Consensus 92 e~i~G~~L~~~~~~---------~~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~--~~~~~iIDFd~At~k 156 (201)
T COG2112 92 EYIDGRPLGKLEIG---------GD----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVN--DRDVYIIDFDSATFK 156 (201)
T ss_pred hhhcCcchhhhhhc---------cc----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEec--CCcEEEEEccchhhc
Confidence 99998 44433221 01 2233445555555667899999985 44444442 447999999998854
Q ss_pred CCC
Q 001034 1029 TDH 1031 (1182)
Q Consensus 1029 ~~~ 1031 (1182)
..+
T Consensus 157 ~~p 159 (201)
T COG2112 157 KKP 159 (201)
T ss_pred cCC
Confidence 433
No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.66 E-value=0.024 Score=62.48 Aligned_cols=147 Identities=14% Similarity=0.055 Sum_probs=81.0
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEE-E--EEEecCeEEEEE
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLY-D--YFYYREHLLIVC 950 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~-d--sFqd~e~LyLVm 950 (1182)
++.|..|....+|++.. .+..+++|+... ........|+.++..+.... ..-|.++... + +.......++||
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g-~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERG-LPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCC-CCCCccccCCCCcEeeeeCCceEEEE
Confidence 44677888889999863 345789998865 22355667888888886542 1112222210 0 123345678999
Q ss_pred EecccChH----------------HHHhhhcccCCc----cccCHHHH----------HHHHHHHHHHHHHHHh------
Q 001034 951 ELLKANLY----------------EFHKFNRESGGE----VYFTMPRL----------QSITIQCLEALQFLHG------ 994 (1182)
Q Consensus 951 EyL~GsLl----------------d~Lk~~~~sgge----l~Lse~eI----------r~Ia~QILsALeYLHS------ 994 (1182)
++++|... .++......... ........ ......+..++.++..
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 99987321 111111000000 00000000 0011123334444443
Q ss_pred -cCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 995 -LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 995 -~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
.++||+|+.|.|||++. .+.+.|+||+.+..
T Consensus 174 ~~~l~HgD~~~~Nil~~~--~~~~~iIDfe~a~~ 205 (296)
T cd05153 174 PRGVIHADLFRDNVLFDG--DELSGVIDFYFACT 205 (296)
T ss_pred CCcCCccCcCcccEEEeC--CceEEEeehhhhcC
Confidence 47999999999999984 45568999988754
No 476
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.41 E-value=0.027 Score=62.95 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=79.8
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEE---EEEecCeEEEEE
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYD---YFYYREHLLIVC 950 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~d---sFqd~e~LyLVm 950 (1182)
++.|+.|.-..+|++.. .++ .+++|+..... .......+..++..|.... ...|-++...+ +.......++||
T Consensus 27 i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g-~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAARG-LPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred ccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCC-CCCCccccCCCCCeehhcCCeEEEEE
Confidence 45677787789999863 344 57889876532 1344556777887775432 11222222111 112245678999
Q ss_pred EecccChH----------------HHHhhhccc-CC-ccccCHHH-----HH----------HHHHHHHHHHHHHH----
Q 001034 951 ELLKANLY----------------EFHKFNRES-GG-EVYFTMPR-----LQ----------SITIQCLEALQFLH---- 993 (1182)
Q Consensus 951 EyL~GsLl----------------d~Lk~~~~s-gg-el~Lse~e-----Ir----------~Ia~QILsALeYLH---- 993 (1182)
+|++|... .++.....- .. ........ .. .....+..++.+|.
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 99987311 111110000 00 00000000 00 01112334455553
Q ss_pred ---hcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 994 ---GLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 994 ---S~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
..++||+|+.+.||+++. ++.+.|+||+.+..
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~~--~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFDG--DSVKGVIDFYFACT 217 (307)
T ss_pred hcCCCccCCCCCCcCcEEEEC--CceEEEeecccccC
Confidence 268999999999999984 45568999998753
No 477
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.34 E-value=0.029 Score=66.34 Aligned_cols=77 Identities=23% Similarity=0.237 Sum_probs=54.2
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEec------c--chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKN------N--KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk------~--k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.+.||.|.+..||++.....++.++||.-.. . ....+....|...|+.+....+ .++++++.+ +...
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p---~~VPkV~~~--D~~~ 105 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP---DLVPKVYHY--DEEL 105 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC---CCCCeEEEE--CCCC
Confidence 3578999999999999854446899998531 1 1234567778888888764432 246666665 4566
Q ss_pred EEEEEEeccc
Q 001034 946 LLIVCELLKA 955 (1182)
Q Consensus 946 LyLVmEyL~G 955 (1182)
.++|||++++
T Consensus 106 ~~lVME~L~~ 115 (401)
T PRK09550 106 AVTVMEDLSD 115 (401)
T ss_pred CEEEEecCCC
Confidence 7899999874
No 478
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.32 E-value=0.003 Score=72.81 Aligned_cols=135 Identities=20% Similarity=0.247 Sum_probs=92.9
Q ss_pred CEEEEEEeccCCceEEEEEEECCCCcEEEEEEEeccchhh-----------------------HHHHHHHHHHHHhcCCC
Q 001034 870 RYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFF-----------------------DQSLDEIKLLKYVNKHD 926 (1182)
Q Consensus 870 rYeIlk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~-----------------------dq~l~EikILr~L~h~~ 926 (1182)
-|.+...||-|--+.||.+-+ ..|++.|+|+.+..+..+ -....|...++.|..+.
T Consensus 93 v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 367788999999999999986 678999999875322111 12345666666665532
Q ss_pred CCCCcceEEEEEEEEecCeEEEEEEecccC-hHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhcCccccccCCc
Q 001034 927 PGDKYHLLRLYDYFYYREHLLIVCELLKAN-LYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGLGLIHCDLKPE 1005 (1182)
Q Consensus 927 ~l~HPnIVkL~dsFqd~e~LyLVmEyL~Gs-Lld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~GIIHRDIKPe 1005 (1182)
.-+.+.++ .+..|+|||++.|- |...... ..+..+...+..-|.-|-..|+||+|..-=
T Consensus 172 ----fpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v------------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEF 231 (465)
T KOG2268|consen 172 ----FPVPKPID----HNRHCVVMELVDGYPLRQVRHV------------EDPPTLYDDLMGLIVRLANHGLIHGDFNEF 231 (465)
T ss_pred ----CCCCCccc----ccceeeHHHhhcccceeeeeec------------CChHHHHHHHHHHHHHHHHcCceecccchh
Confidence 12444444 34668999999873 3322211 123345556666677888999999999999
Q ss_pred cEEEccCCCceEEEecCCCccc
Q 001034 1006 NILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 1006 NILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
||+|+. .+.+++|||-.+..
T Consensus 232 Nimv~d--d~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 232 NIMVKD--DDKIVVIDFPQMVS 251 (465)
T ss_pred eeEEec--CCCEEEeechHhhc
Confidence 999994 67799999976543
No 479
>PLN02236 choline kinase
Probab=96.23 E-value=0.035 Score=63.96 Aligned_cols=143 Identities=22% Similarity=0.303 Sum_probs=79.1
Q ss_pred EEeccCCceEEEEEEECC----CCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEE
Q 001034 875 EYLGSAAFSKAIQAHDLH----TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVC 950 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~----TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVm 950 (1182)
..|-.|-...+|++.... .++.|++|+........-....|..+++.+.... --.++++.|... .|+
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~g-----l~P~~~~~~~~g----~v~ 112 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHG-----QGPRLLGRFPNG----RVE 112 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcC-----CCCceEEEECCc----eEE
Confidence 355557788899886322 3478999988765433333467888888887653 123445555322 578
Q ss_pred EecccChHHHH---------------h-hh--cccCCccccCHHHHHHHHHHH-----------------HHHHHHH---
Q 001034 951 ELLKANLYEFH---------------K-FN--RESGGEVYFTMPRLQSITIQC-----------------LEALQFL--- 992 (1182)
Q Consensus 951 EyL~GsLld~L---------------k-~~--~~sggel~Lse~eIr~Ia~QI-----------------LsALeYL--- 992 (1182)
+|+.|..+... . .. ...+...+.....+..++.++ ...+..|
T Consensus 113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~ 192 (344)
T PLN02236 113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE 192 (344)
T ss_pred EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence 88876321100 0 00 001111011112222322111 1111111
Q ss_pred -----HhcCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 993 -----HGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 993 -----HS~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
+...++|+|+++.|||++. .++.+.|+||..+..
T Consensus 193 ~~~~~~~~~~cH~Dl~~~Nil~~~-~~~~~~lID~Eya~~ 231 (344)
T PLN02236 193 LSGDDQEIGFCHNDLQYGNIMIDE-ETRAITIIDYEYASY 231 (344)
T ss_pred hcccCCCceEEeCCCCcCcEEEeC-CCCcEEEEeehhccc
Confidence 1236899999999999984 345799999988753
No 480
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.22 E-value=0.03 Score=63.94 Aligned_cols=72 Identities=14% Similarity=0.227 Sum_probs=44.2
Q ss_pred EeccCCceEEEEEEECCC---CcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEe
Q 001034 876 YLGSAAFSKAIQAHDLHT---GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCEL 952 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~T---Gr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEy 952 (1182)
.|..|=...+|++..... +..|++|+........-...+|..+++.+..... -.++++++. +. +|.+|
T Consensus 21 ~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl-----~P~~l~~~~--~G--~i~~f 91 (330)
T PLN02421 21 RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGF-----GAKLLGVFG--NG--MIQSF 91 (330)
T ss_pred EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCC-----CCceeEEeC--Cc--Eeehh
Confidence 444466777888864322 3478999887654434445678888888876531 234555552 22 57888
Q ss_pred cccC
Q 001034 953 LKAN 956 (1182)
Q Consensus 953 L~Gs 956 (1182)
+.|.
T Consensus 92 i~g~ 95 (330)
T PLN02421 92 INAR 95 (330)
T ss_pred hcCC
Confidence 7753
No 481
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=96.03 E-value=0.017 Score=61.36 Aligned_cols=101 Identities=24% Similarity=0.265 Sum_probs=73.9
Q ss_pred HHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc-ChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHH
Q 001034 913 LDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA-NLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQF 991 (1182)
Q Consensus 913 l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G-sLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeY 991 (1182)
..|.-+++.+.+.. +++++++++ .-++|.||++. .++..... ...-...++.....|+.+++..+.+
T Consensus 7 ~~E~lll~~l~~~~-----~~pk~lG~C----G~~~v~E~~~~~~~~~~~~~---l~~~~~~~w~~R~~iA~~lL~~l~~ 74 (188)
T PF12260_consen 7 NNEPLLLQLLQGSE-----PFPKLLGSC----GRFYVVEYVGAGSLYGIYRP---LSQFLQSPWEQRAKIALQLLELLEE 74 (188)
T ss_pred ccHHHHHHHcCCCC-----CCCCeeeEC----CCEEEEEeecCccccccccc---cccccccCHHHHHHHHHHHHHHHHH
Confidence 35778888887653 799999987 34678899884 34311000 0000116788899999999999999
Q ss_pred HHh---cCccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 992 LHG---LGLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 992 LHS---~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
|+. ..+...|++|+|+-++. ++++|++|......
T Consensus 75 l~~~~~~~~~lcDv~~~nfgv~~--~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 75 LDHGPLGFFYLCDVSPDNFGVND--DGRLKLIDLDDVFV 111 (188)
T ss_pred HhcCCCCcEEEeecchHHeEEeC--CCcEEEEechhcch
Confidence 987 34777999999999994 67899999987644
No 482
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.66 E-value=0.035 Score=58.71 Aligned_cols=53 Identities=17% Similarity=0.136 Sum_probs=33.7
Q ss_pred CcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEeccc
Q 001034 894 GMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKA 955 (1182)
Q Consensus 894 Gr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~G 955 (1182)
.+.|++++........-....|..+++.+.... .-.+++++|.. .+|.+|+.|
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g-----~~p~~~~~~~~----g~v~e~i~g 54 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAG-----LGPKIIYFFEN----GRVEEFIEG 54 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTT-----SSS-EEEEETT----EEEEE--SS
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcC-----CCCeEEEEcCC----CcEEEEecc
Confidence 467899999877555566778899988887653 23455555522 256688765
No 483
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.41 E-value=0.024 Score=68.63 Aligned_cols=91 Identities=22% Similarity=0.250 Sum_probs=62.8
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhcCCcchhhhhcccccchhhcccchhhhhhcchhhhhhcccccc
Q 001034 1054 KKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIEQGMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKT 1133 (1182)
Q Consensus 1054 ~kSDIWSLGVILYELLTGr~PF~g~d~~elLakIv~ilGp~PeemL~~~k~s~k~F~k~~~~~er~~ets~Le~liPk~~ 1133 (1182)
+++||||+|.|+.++..|...|..-...+.+..|.+..- .+.+.. . . ....
T Consensus 110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~-~d~~~~----------------~-~----a~e~------- 160 (725)
T KOG1093|consen 110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYT-DDQELL----------------S-T----AMEH------- 160 (725)
T ss_pred cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcc-CchhHH----------------H-H----HHHH-------
Confidence 499999999999999999988877666666555542221 111100 0 0 0000
Q ss_pred ccccCCCCCcHHHHHHHHHhcccCCCCCCCHHHHHcCCCCCCC
Q 001034 1134 SLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSHP 1176 (1182)
Q Consensus 1134 sL~~~l~~~SeeL~DLIrkMLq~DPekRPTAeELLqHPWFk~~ 1176 (1182)
.....++..+++++.+|+...|..||...++++|+-|++.
T Consensus 161 ---~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 161 ---LIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV 200 (725)
T ss_pred ---HHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence 0111345678899999999999999999999999988765
No 484
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.34 E-value=0.16 Score=56.92 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=33.7
Q ss_pred eccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCc
Q 001034 877 LGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKY 931 (1182)
Q Consensus 877 LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HP 931 (1182)
++.|--..|+.+. ...|+.+++|.-+... ......+|.++|+.+...-+...|
T Consensus 19 ~~~g~~~~v~~i~-~~~g~~~VlR~p~~~~-~~~~l~rE~~vL~~L~~~l~vpvP 71 (276)
T cd05152 19 NESGLDFQVVFAK-DTDGVPWVLRIPRRPD-VSERAAAEKRVLALVRKHLPVQVP 71 (276)
T ss_pred cCCcceeEEEEEE-cCCCCeEEEEecCCHH-HHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3555556667663 2457788888775432 345678899999998754333334
No 485
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.07 E-value=0.48 Score=52.45 Aligned_cols=29 Identities=41% Similarity=0.493 Sum_probs=24.9
Q ss_pred cCccccccCCccEEEccCCCceEEEecCCCcc
Q 001034 995 LGLIHCDLKPENILVKSYSRCEVKVIDLGSSC 1026 (1182)
Q Consensus 995 ~GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~ 1026 (1182)
.++||+|+.+.|||++. +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~~---~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD---NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEeC---CcEEEEECcccc
Confidence 57899999999999984 458999998764
No 486
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.77 E-value=0.42 Score=54.68 Aligned_cols=74 Identities=12% Similarity=-0.000 Sum_probs=45.0
Q ss_pred CCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCC-CCcceEEEEE--EEEecCeEEEEEEecccC
Q 001034 880 AAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPG-DKYHLLRLYD--YFYYREHLLIVCELLKAN 956 (1182)
Q Consensus 880 GaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l-~HPnIVkL~d--sFqd~e~LyLVmEyL~Gs 956 (1182)
+.-..||++.. .++..+++|+.+........+..|+.++..|...... .-| +..-+ .+......+.|++++.|.
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p--~~~~G~~~~~~~g~~~~l~~~~~G~ 112 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAP--LAFNGQTLHEHQGFRFALFPRRGGR 112 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCC--ccCCCCEEEEECCEEEEEEeeeCCC
Confidence 44567888864 5567899999875544456677888888877653210 111 11111 122345678899998763
No 487
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=94.34 E-value=0.45 Score=54.12 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=49.7
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEec
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELL 953 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL 953 (1182)
.+.|+-|....+|++. .+++.+.||+-.. .....+..|..-|+.|...... .+.+++.+.......||||||+
T Consensus 22 ~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~--~~~~~f~~Ea~gL~~L~~~~~~---~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 22 IEPVSGGDINEAYRLD--TDGGSYFVKVNSE--SGRDMFEGEAEGLKALAEANPI---RVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp EEEE--SSSSEEEEEE--TTS-EEEEEEEEG--GGCCHHHHHHHHHHHHCHTTTS---BS--EEEEEE-SSCCEEEEE--
T ss_pred eEecCCCChhheEEEE--CCCccEEEEecCh--hhHHHHHHHHHHHHHHHhcCCC---CCCeEEEEEeecCCceEEEEee
Confidence 4578889999999987 7788899998873 3345677888888888544322 5778888887777789999998
Q ss_pred cc
Q 001034 954 KA 955 (1182)
Q Consensus 954 ~G 955 (1182)
+.
T Consensus 95 ~~ 96 (288)
T PF03881_consen 95 EM 96 (288)
T ss_dssp --
T ss_pred cC
Confidence 74
No 488
>PTZ00384 choline kinase; Provisional
Probab=94.29 E-value=0.31 Score=57.51 Aligned_cols=73 Identities=12% Similarity=0.144 Sum_probs=44.0
Q ss_pred EEeccCCceEEEEEEECCC-Cc-----EEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEE
Q 001034 875 EYLGSAAFSKAIQAHDLHT-GM-----DVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLI 948 (1182)
Q Consensus 875 k~LGkGaFGeVyLAkDk~T-Gr-----~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyL 948 (1182)
+.|..|--..+|++..... +. .|.+++........-....|+.+++.+.... .-.++++.|. -++
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~g-----lgP~l~~~f~----~g~ 126 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNN-----FGPKIIGRFG----DFT 126 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCC-----CCCeEEEecC----CEE
Confidence 4555688888998864322 12 2444443232222333457888988887664 3456667663 368
Q ss_pred EEEecccC
Q 001034 949 VCELLKAN 956 (1182)
Q Consensus 949 VmEyL~Gs 956 (1182)
|.||+.|.
T Consensus 127 l~efIeGr 134 (383)
T PTZ00384 127 IQEWVEGN 134 (383)
T ss_pred EEEEeccc
Confidence 99999874
No 489
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=93.95 E-value=0.38 Score=56.70 Aligned_cols=75 Identities=19% Similarity=0.159 Sum_probs=50.3
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEec-----c---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKN-----N---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLL 947 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk-----~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~Ly 947 (1182)
.||-|...-||++.+...++.++||.-.. . +....+...|..+|+......+. +++++|. .+.....
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~---~vP~vy~--~D~e~~~ 76 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPH---LVPRIFH--FDTEMAV 76 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCcc---ccCeEEE--Eccccce
Confidence 47999999999999754446899997531 1 23345666788888777654322 4555543 3456667
Q ss_pred EEEEeccc
Q 001034 948 IVCELLKA 955 (1182)
Q Consensus 948 LVmEyL~G 955 (1182)
+|||+++.
T Consensus 77 ~vMEdL~~ 84 (370)
T TIGR01767 77 TVMEDLSH 84 (370)
T ss_pred ehHhhCcc
Confidence 99999853
No 490
>PRK06148 hypothetical protein; Provisional
Probab=93.78 E-value=0.76 Score=60.47 Aligned_cols=149 Identities=17% Similarity=0.106 Sum_probs=78.1
Q ss_pred EeccCCceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCC-CCCCcceEEEE-----EEEEe-c--CeE
Q 001034 876 YLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHD-PGDKYHLLRLY-----DYFYY-R--EHL 946 (1182)
Q Consensus 876 ~LGkGaFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~-~l~HPnIVkL~-----dsFqd-~--e~L 946 (1182)
.|+ |..-.+|++.. .+|..+++|+++.... ......+..+|..|.... ....|.+++.. ..... . .+.
T Consensus 32 ~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~-~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~ 108 (1013)
T PRK06148 32 PLD-GERDLNFRLTT-DDGADYILKIVNPSEP-RVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRL 108 (1013)
T ss_pred ecC-CcCCceEEEEe-CCCCeEEEEEcCCccc-hhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEE
Confidence 453 34577788763 5677899999986532 233344566777665432 12334444422 11111 1 157
Q ss_pred EEEEEecccChHHH-------------------Hh---hhcccCCccccC-----------------HHHHHHHHHHHHH
Q 001034 947 LIVCELLKANLYEF-------------------HK---FNRESGGEVYFT-----------------MPRLQSITIQCLE 987 (1182)
Q Consensus 947 yLVmEyL~GsLld~-------------------Lk---~~~~sggel~Ls-----------------e~eIr~Ia~QILs 987 (1182)
+.+++|++|..+.- .. ....+.....+. ....+.++.+++.
T Consensus 109 vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~~ 188 (1013)
T PRK06148 109 LRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFLA 188 (1013)
T ss_pred EEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHHH
Confidence 78899999853321 00 000000000000 1112222333333
Q ss_pred HHH-----HHH--hcCccccccCCccEEEccCCCceEE-EecCCCccc
Q 001034 988 ALQ-----FLH--GLGLIHCDLKPENILVKSYSRCEVK-VIDLGSSCF 1027 (1182)
Q Consensus 988 ALe-----YLH--S~GIIHRDIKPeNILIDs~~dG~IK-LiDFGLA~~ 1027 (1182)
.+. .|. ..++||+|+.+.|||++....+.+. |+|||.+..
T Consensus 189 ~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 189 RFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred HHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 322 122 2579999999999999964333555 999998764
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=93.55 E-value=0.58 Score=52.71 Aligned_cols=30 Identities=20% Similarity=0.261 Sum_probs=25.9
Q ss_pred CccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 996 GLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 996 GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
++||+|+.++|||++. ++.+.|+||..++.
T Consensus 197 ~lcHgD~~~~Nvl~~~--~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDE--TRGGYFINFEKASF 226 (309)
T ss_pred eeeCCCCcHHhEEEcC--CCCEEEEEhhhccc
Confidence 7999999999999984 55689999988764
No 492
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=93.16 E-value=0.78 Score=53.34 Aligned_cols=142 Identities=20% Similarity=0.199 Sum_probs=80.7
Q ss_pred CceEEEEEEECCCCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCC-CCCcceEEEEEEEE--ecC--eEEEEEEeccc
Q 001034 881 AFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDP-GDKYHLLRLYDYFY--YRE--HLLIVCELLKA 955 (1182)
Q Consensus 881 aFGeVyLAkDk~TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~-l~HPnIVkL~dsFq--d~e--~LyLVmEyL~G 955 (1182)
.-..+|++.. .+|+. ++|+.+.. .....+..|+.++..|..... ..-| |..+-+-.. ... +.+.|++|++|
T Consensus 37 ~eN~~f~~~~-~~g~~-iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~P-l~~~dG~~l~~~~~~~r~a~lf~~l~G 112 (331)
T COG2334 37 EENSNFRVQT-EDGRY-ILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAP-LPSLDGELLEALSGGPRPAALFEYLPG 112 (331)
T ss_pred ccCceEEEEe-cCCCe-EEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCC-ccCCCcchhhhccCCceeEEEEEecCC
Confidence 5567888874 44444 99999887 556777888888888876532 1222 333222111 123 77889999987
Q ss_pred ChHHH-----------------HhhhcccC----Ccc-ccCHH----HH---------HHHHHHHHHHHHHHHh------
Q 001034 956 NLYEF-----------------HKFNRESG----GEV-YFTMP----RL---------QSITIQCLEALQFLHG------ 994 (1182)
Q Consensus 956 sLld~-----------------Lk~~~~sg----gel-~Lse~----eI---------r~Ia~QILsALeYLHS------ 994 (1182)
..... +...+.-. ... ...+. .. .....++...+..+.+
T Consensus 113 ~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~l 192 (331)
T COG2334 113 RPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHL 192 (331)
T ss_pred cCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhC
Confidence 54431 00000000 000 01111 00 1122344455555542
Q ss_pred --cC--ccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 995 --LG--LIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 995 --~G--IIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
.+ +||+|+.|+|||++.... .+.++||+.++.
T Consensus 193 p~~~~~iIH~D~~~~NVl~d~~~~-~~g~iDFdDa~~ 228 (331)
T COG2334 193 PALGDQIIHGDLHPDNVLFDDDTD-VSGFIDFDDAGY 228 (331)
T ss_pred CcccceeeecCCCccceeEcCCCC-eeeEEEcccccc
Confidence 34 999999999999995222 488999998753
No 493
>PTZ00296 choline kinase; Provisional
Probab=92.62 E-value=0.8 Score=55.12 Aligned_cols=74 Identities=15% Similarity=0.080 Sum_probs=46.6
Q ss_pred EEEeccCCceEEEEEEECC--------CCcEEEEEEEeccchhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 874 TEYLGSAAFSKAIQAHDLH--------TGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~--------TGr~VAVKIIkk~k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
++.|..|=...+|++.... .++.|.+++.-......-....|..+++.+..... -.++++.|.
T Consensus 110 i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi-----~P~l~~~f~---- 180 (442)
T PTZ00296 110 VNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRI-----APQLLNTFS---- 180 (442)
T ss_pred EEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCC-----CCceEEEeC----
Confidence 4456666667788876432 25689999986654433355678888888876531 124555552
Q ss_pred EEEEEEecccC
Q 001034 946 LLIVCELLKAN 956 (1182)
Q Consensus 946 LyLVmEyL~Gs 956 (1182)
-+.|.+|+.|.
T Consensus 181 gg~I~efi~g~ 191 (442)
T PTZ00296 181 GGRIEEWLYGD 191 (442)
T ss_pred CCEEEEeeCCc
Confidence 34678888764
No 494
>PRK12396 5-methylribose kinase; Reviewed
Probab=92.48 E-value=0.74 Score=54.97 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=53.0
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEe----cc---chhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeE
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIK----NN---KDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHL 946 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIk----k~---k~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~L 946 (1182)
.+.||-|...-||++.+...++.|+||.-. .. +...++..-|..+|+.+....+. +++++|. .+....
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~---~VP~vy~--~D~e~~ 108 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPG---LVPKVYL--FDSVMN 108 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCC---cCCeEEE--ECcHHh
Confidence 568899999999999974445679998743 21 23356677788888887665332 4555544 355667
Q ss_pred EEEEEecc
Q 001034 947 LIVCELLK 954 (1182)
Q Consensus 947 yLVmEyL~ 954 (1182)
.+|||+++
T Consensus 109 ~~vMEdL~ 116 (409)
T PRK12396 109 CCVMEDLS 116 (409)
T ss_pred hHHHHhCc
Confidence 78999985
No 495
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=92.28 E-value=0.14 Score=68.43 Aligned_cols=143 Identities=13% Similarity=0.017 Sum_probs=98.7
Q ss_pred CCcceEEEEEEEEe--cCeEEEEEEecc-cChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHhc-----Ccccc
Q 001034 929 DKYHLLRLYDYFYY--REHLLIVCELLK-ANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHGL-----GLIHC 1000 (1182)
Q Consensus 929 ~HPnIVkL~dsFqd--~e~LyLVmEyL~-GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS~-----GIIHR 1000 (1182)
.|+++...+.-... ....|++++|+. |.+...+....... .++...-+.....+.+.+..-+|+. =.+|+
T Consensus 1287 ~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~--~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~ 1364 (2724)
T KOG1826|consen 1287 KHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEES--PDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSK 1364 (2724)
T ss_pred hceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccC--CcchhchHHHHHHHHHhccchhhhcccCCccchhh
Confidence 34455554443322 245688888887 45666665433221 1122222222233337777777753 27899
Q ss_pred ccCCccEEEccCCCceEEEecCCCccccCCC---cccccCCCcccchhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001034 1001 DLKPENILVKSYSRCEVKVIDLGSSCFETDH---LCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLF 1075 (1182)
Q Consensus 1001 DIKPeNILIDs~~dG~IKLiDFGLA~~~~~~---~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLGVILYELLTGr~PF 1075 (1182)
+||+-|.+|.. +..+|+.++|+.+..... ....++++.|++|++.....++.++|+|.+++.+|...-|..+|
T Consensus 1365 ~Lkf~lpmIVt--ny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1365 SLKFTLPMIVT--NYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred hhhhhccceec--CCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 99999999994 667999999999843332 33456788899999999989999999999999999999998887
No 496
>PLN02756 S-methyl-5-thioribose kinase
Probab=91.67 E-value=1.2 Score=53.50 Aligned_cols=75 Identities=13% Similarity=0.103 Sum_probs=51.2
Q ss_pred EEEeccCCceEEEEEEECCCCcEEEEEEEe-----ccc---hhhHHHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCe
Q 001034 874 TEYLGSAAFSKAIQAHDLHTGMDVCVKIIK-----NNK---DFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREH 945 (1182)
Q Consensus 874 lk~LGkGaFGeVyLAkDk~TGr~VAVKIIk-----k~k---~~~dq~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~ 945 (1182)
.+.||-|....||++.+ .+..++||.-. ... ........|...|+.+....+ ..+.+++.+.. ..
T Consensus 37 ~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p---~~VPkVy~~de--d~ 109 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCP---DHVPEVYHFDR--TM 109 (418)
T ss_pred EEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCC---CCCCeEEEECC--CC
Confidence 56889999999999986 34568899865 111 134455666777777654322 25677777664 45
Q ss_pred EEEEEEeccc
Q 001034 946 LLIVCELLKA 955 (1182)
Q Consensus 946 LyLVmEyL~G 955 (1182)
-++|||++++
T Consensus 110 ~vlvME~L~~ 119 (418)
T PLN02756 110 ALIGMRYLEP 119 (418)
T ss_pred CEEEEeecCC
Confidence 6789999976
No 497
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=89.31 E-value=1.1 Score=53.36 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=68.1
Q ss_pred cCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHHHHHh-cCccccccCCccEEEccCCCceEEEec
Q 001034 943 REHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHG-LGLIHCDLKPENILVKSYSRCEVKVID 1021 (1182)
Q Consensus 943 ~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALeYLHS-~GIIHRDIKPeNILIDs~~dG~IKLiD 1021 (1182)
..++|++|++-.+.+.- ++. ....++..|+++++..|.-+.. ..+=||++..+||||+ .|.|.|||
T Consensus 298 ~~y~yl~~kdhgt~is~-ik~---------~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId---~GnvtLID 364 (488)
T COG5072 298 TLYLYLHFKDHGTPISI-IKA---------DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID---EGNVTLID 364 (488)
T ss_pred ceEEEEEEecCCceeee-eec---------ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee---cCceEEEE
Confidence 46788888887655431 111 3456778888888887776664 4689999999999999 67899999
Q ss_pred CCCccccCCCcccccCCCcccchhhhcCCCCCchhhHHHHH
Q 001034 1022 LGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLG 1062 (1182)
Q Consensus 1022 FGLA~~~~~~~ss~vGTp~YmAPEVLlg~~yS~kSDIWSLG 1062 (1182)
|-+++...... .+..-..--|-.|.|.. +..-+||-+-
T Consensus 365 fklsRl~~~q~--~isy~rldhp~lF~G~d-d~QFeIYrlM 402 (488)
T COG5072 365 FKLSRLSYSQG--IISYNRLDHPDLFNGVD-DYQFEIYRLM 402 (488)
T ss_pred eeeeecccCCc--eeeccccCchhhhcCcc-ceeeeHHHHH
Confidence 99987432211 11111233455555443 5566777643
No 498
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=87.99 E-value=4.4 Score=47.24 Aligned_cols=30 Identities=23% Similarity=0.451 Sum_probs=25.6
Q ss_pred CccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 996 GLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 996 GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
.++|+|+.+.||+|+. .+-+-++||+++..
T Consensus 199 ~lvHGD~~~gNlii~~--~~~~gVlDwe~~~l 228 (321)
T COG3173 199 VLVHGDYRPGNLIIDP--GRPTGVLDWELATL 228 (321)
T ss_pred eeeeCCcccCCEEEeC--CCeeEEEecccccc
Confidence 4899999999999995 33499999999865
No 499
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=83.65 E-value=1.7 Score=48.97 Aligned_cols=48 Identities=23% Similarity=0.222 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHhc--CccccccCCccEEEccCCCceEEEecCCCccc
Q 001034 978 LQSITIQCLEALQFLHGL--GLIHCDLKPENILVKSYSRCEVKVIDLGSSCF 1027 (1182)
Q Consensus 978 Ir~Ia~QILsALeYLHS~--GIIHRDIKPeNILIDs~~dG~IKLiDFGLA~~ 1027 (1182)
++..+..+-.++.-+|.. -+||+|+.|+|+|++. .+.++|+||..|..
T Consensus 134 ~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~--~~~l~LIDWEyAg~ 183 (269)
T COG0510 134 LRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTD--KGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcC--CCcEEEEecccCCC
Confidence 333444555555555544 5999999999999993 57899999988764
No 500
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=82.36 E-value=5.2 Score=45.22 Aligned_cols=84 Identities=15% Similarity=0.198 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHhcCCCCCCCcceEEEEEEEEecCeEEEEEEecccChHHHHhhhcccCCccccCHHHHHHHHHHHHHHHH
Q 001034 911 QSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQ 990 (1182)
Q Consensus 911 q~l~EikILr~L~h~~~l~HPnIVkL~dsFqd~e~LyLVmEyL~GsLld~Lk~~~~sggel~Lse~eIr~Ia~QILsALe 990 (1182)
-+..+.++++++. .|++|..- ..-.+.+|.|+|-. ......- ++..=+.+|.
T Consensus 104 ~y~nky~v~Armh--------GilrL~ND--n~~~yGvIlE~Cy~-----------------~~i~~~N-~i~agi~~L~ 155 (308)
T PF07387_consen 104 LYFNKYRVFARMH--------GILRLKND--NNYKYGVILERCYK-----------------IKINFSN-FITAGIKDLM 155 (308)
T ss_pred hhhhhhhHHHHhh--------heeEeecC--CCceeEEEEeeccC-----------------cccchhH-HHHHhHHHHH
Confidence 3456778888763 58888732 23357788898831 0011111 1222246677
Q ss_pred HHHh--cCccccccCCccEEEccCCCceEEEecCCC
Q 001034 991 FLHG--LGLIHCDLKPENILVKSYSRCEVKVIDLGS 1024 (1182)
Q Consensus 991 YLHS--~GIIHRDIKPeNILIDs~~dG~IKLiDFGL 1024 (1182)
-.|+ .+.+|+|..|+|||-| +.|.+||.|=+.
T Consensus 156 ~fH~~~~~~lHGD~np~NiM~D--~~G~lKlVDP~~ 189 (308)
T PF07387_consen 156 DFHSENQHCLHGDCNPDNIMCD--KFGYLKLVDPVC 189 (308)
T ss_pred HhhccCCCeecCCCChhheeec--CCCCEEecChhh
Confidence 8884 5799999999999999 478899999764
Done!