BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001037
(1179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6EVK6|BRM_ARATH ATP-dependent helicase BRM OS=Arabidopsis thaliana GN=BRM PE=1 SV=1
Length = 2193
Score = 1671 bits (4327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 852/1187 (71%), Positives = 970/1187 (81%), Gaps = 49/1187 (4%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W+SELH WLPSVSCIYYVG KDQRS+LFSQEV A+KFNVLVTTYEFIMYDRSKLSKVDWK
Sbjct: 1045 WKSELHTWLPSVSCIYYVGTKDQRSKLFSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWK 1104
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLP+VFDNRK
Sbjct: 1105 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRK 1164
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
AFHDWF+QPFQKEGP HN +DDWLETEKKVI+IHRLHQILEPFMLRRRVEDVEGSLP KV
Sbjct: 1165 AFHDWFAQPFQKEGPAHNIEDDWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKV 1224
Query: 184 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 243
S+VLRCRMSAIQSA+YDWIKATGTLRVDP+DEK R QKNPIYQAK+Y+TLNNRCMELRK
Sbjct: 1225 SVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKA 1284
Query: 244 CNHPLLNYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYL 303
CNHPLLNYPYF+D SKDFLV+SCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYL
Sbjct: 1285 CNHPLLNYPYFNDFSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYL 1344
Query: 304 QWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDP 363
QWR+LVYRRIDGTTSLEDRESAIVDFN D+DCFIFLLSIRAAGRGLNLQ+ADTV+IYDP
Sbjct: 1345 QWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDP 1404
Query: 364 DPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKD 423
DPNPKNEEQAVARAHRIGQ REVKVIYMEAVV+K+SSHQKEDELRSGG+VDLEDD+AGKD
Sbjct: 1405 DPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSHQKEDELRSGGSVDLEDDMAGKD 1464
Query: 424 RYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHD 483
RYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHD
Sbjct: 1465 RYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHD 1524
Query: 484 VPSLQEVNRMIARSEDEVELFDQMDEEFGWIEEMTRYDQVPKWLRASTKEVNATIANLSK 543
VPSL EVNRMIARSE+EVELFDQMDEEF W EEMT ++QVPKWLRAST+EVNAT+A+LSK
Sbjct: 1525 VPSLHEVNRMIARSEEEVELFDQMDEEFDWTEEMTNHEQVPKWLRASTREVNATVADLSK 1584
Query: 544 KPSKNILFGSNIGVDSGEIETERKRG-PKGKKYPNYKEVDDEIGEYSEASSDERNGYPVQ 602
KPSKN+L SN+ V G ERKRG PK KK NYKE++D+I YSE SS+ERN
Sbjct: 1585 KPSKNMLSSSNLIVQPGGPGGERKRGRPKSKKI-NYKEIEDDIAGYSEESSEERNIDSGN 1643
Query: 603 EEEGEIGEFEDDEYSGAVGAPLSNKDQSEEDGPVCEGGYDYLRPSENTRNNHVVEEAGSS 662
EEEG+I +F+DDE +GA+G +NK + + + PVC GYDY S + + N ++AGSS
Sbjct: 1644 EEEGDIRQFDDDELTGALGDHQTNKGEFDGENPVC--GYDYPPGSGSYKKNPPRDDAGSS 1701
Query: 663 GSSSNSRRLTQIVSPVSPQKFGSLSALEARPGSLSKRMPDELEEGEIAVSGDSHMDHQQS 722
GSS S R ++ SPVS QKFGSLSAL+ RPGS+SKR+ D+LEEGEIA SGDSH+D Q+S
Sbjct: 1702 GSSPESHRSKEMASPVSSQKFGSLSALDTRPGSVSKRLLDDLEEGEIAASGDSHIDLQRS 1761
Query: 723 GSWTHDRDEGEDEQVLQPKIKRKRSIRVRPRHTVERPEERSCTDTPLHRGDSSLLPFQMD 782
GSW HDRDEG++EQVLQP IKRKRSIR+RPR T ER + ++ P + P Q+D
Sbjct: 1762 GSWAHDRDEGDEEQVLQPTIKRKRSIRLRPRQTAERVD---GSEMPAAQ------PLQVD 1812
Query: 783 NKYPAQLRTDTEMKAHGESNSLRHDQSEPSSKSRRNLPSRKIANAPKSR-ASLKTGRLNC 841
Y ++LRT + +H SS R++P++K+A+ K +S K+GRLN
Sbjct: 1813 RSYRSKLRTVVD--SHSSRQD-----QSDSSSRLRSVPAKKVASTSKLHVSSPKSGRLNA 1865
Query: 842 MPGHTEDAADHFKESWDGKIANASGSSNFSAKMSDVIQRRCKNVISKLQRRIEKEGHQIV 901
ED A+ +E+WDG + SSN A+MS +IQ+RCK VISKLQRRI+KEG QIV
Sbjct: 1866 TQLTVEDNAEASRETWDG--TSPISSSNAGARMSHIIQKRCKIVISKLQRRIDKEGQQIV 1923
Query: 902 PLLTDLWKRIETSGYVSGAGNNILDLRKIDQRVDRLEYNGVMELVSDVQFMLKGAMQFYG 961
P+LT+LWKRI+ +GY +G NN+L+LR+ID RV+RLEY GVMEL SDVQ ML+GAMQFYG
Sbjct: 1924 PMLTNLWKRIQ-NGYAAGGVNNLLELREIDHRVERLEYAGVMELASDVQLMLRGAMQFYG 1982
Query: 962 FSHEVRSEARKVHDLFFDLLKIAFPDTDFREARSALSFTGPLSTSVSTPSPRQTTVGQSK 1021
FSHEVRSEA+KVH+LFFDLLK++FPDTDFREAR+ALSF+G T VSTP+PR + Q K
Sbjct: 1983 FSHEVRSEAKKVHNLFFDLLKMSFPDTDFREARNALSFSGSAPTLVSTPTPRGAGISQGK 2042
Query: 1022 RHKIINEMEPGPSPPQKPPQRGSVPVSEDSRIRVQIPQKESRLGSGSGSSREQSQPDDSP 1081
R K++NE E PS PQ+ QR E+SRIRVQIPQKE++LG + S D+SP
Sbjct: 2043 RQKLVNEPETEPSSPQRSQQR------ENSRIRVQIPQKETKLGGTT------SHTDESP 2090
Query: 1082 ---HPGELVICKKKRKDREKSVVKPRS----VSGPVSPPSLGRNIKSPGLGLVPKDMRHT 1134
HPGELVICKKKRKDREKS K R+ P +GR ++SP G VP++ R
Sbjct: 2091 ILAHPGELVICKKKRKDREKSGPKTRTGGSSSPVSPPPAMIGRGLRSPVSGGVPRETRLA 2150
Query: 1135 QQTTHQHGWANQPAQPANGGSG--AVGWANPVKRLRTDAGKRRPSQL 1179
Q Q W NQP P N G+ +VGWANPVKRLRTD+GKRRPS L
Sbjct: 2151 Q----QQRWPNQPTHPNNSGAAGDSVGWANPVKRLRTDSGKRRPSHL 2193
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 302/522 (57%), Gaps = 65/522 (12%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W E KW P+V + Y G+ R RL ++ A KFNVL+TTYE+++ D++ L+K+ WK
Sbjct: 837 WVLEFEKWAPAVGVVSYKGSPQGR-RLLQNQMRATKFNVLLTTYEYVIKDKAVLAKIQWK 895
Query: 64 YIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNR 122
Y+IIDE RMK+ L + L+ Y RLLLTGTPLQN L ELW+LLN LLP +F +
Sbjct: 896 YMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTPLQNKLPELWALLNFLLPSIFKSC 955
Query: 123 KAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPK 182
F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE LP K
Sbjct: 956 STFEQWFNAPFATTG-----EKVELNEEETILIIRRLHKVLRPFLLRRLKKEVEHQLPDK 1010
Query: 183 VSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRK 242
V +++C MSA+Q +Y +++ G L D ++ + K L N ++LRK
Sbjct: 1011 VEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKGKH-------GKGGAKALMNTIVQLRK 1063
Query: 243 TCNHPLLNYPYFSDLSKDF--------------LVKSCGKLWILDRILIKLQRTGHRVLL 288
CNHP + F + + + L + GK +LDRIL KL+ T HRVLL
Sbjct: 1064 LCNHPFM----FQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKATNHRVLL 1119
Query: 289 FSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGR 348
F MT+ + I+E+YL WRQ Y R+DGTT EDR + FN+ SD F+FLLS RA G
Sbjct: 1120 FCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLSTRAGGL 1179
Query: 349 GLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELR 408
GLNLQ+ADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V
Sbjct: 1180 GLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTV-------------- 1225
Query: 409 SGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLE 468
+E+ + R YK++M ++VI AG FDQ++T ER+ L+
Sbjct: 1226 ----NSVEERILAAAR---------------YKLNMDEKVIQAGMFDQKSTGSERQQFLQ 1266
Query: 469 TLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDEE 510
T+LH ++ +E ++VP + +N MIARSE+E+E+F +MD E
Sbjct: 1267 TILHQDDNEEEEENEVPDDEMINMMIARSEEEIEIFKRMDAE 1308
>sp|O94421|SNF22_SCHPO SWI/SNF chromatin-remodeling complex subunit snf22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf22 PE=1 SV=2
Length = 1680
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/521 (39%), Positives = 304/521 (58%), Gaps = 63/521 (12%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
++ W E KW PSV I Y G R L SQ + + FNVL+TT+E+I+ DR LS++
Sbjct: 930 LTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQSQ-IRSSNFNVLLTTFEYIIKDRPLLSRI 988
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRY-RCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
W ++IIDE R+K+ +S L L Y Q RL+LTGTPLQN+L ELW+LLN +LP++F
Sbjct: 989 KWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQNNLPELWALLNFVLPKIF 1048
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
++ K+F +WF+ PF G D L E+ ++II RLH++L PF+ RR +DVE L
Sbjct: 1049 NSIKSFDEWFNTPFANTG---GQDKIGLNEEEALLIIKRLHKVLRPFLFRRLKKDVEKEL 1105
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C +S +Q +Y +K G L VD E K + K L N M+
Sbjct: 1106 PDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEKGKTGI-----------KGLQNTVMQ 1154
Query: 240 LRKTCNHPLLNYPYFSDLSK---------DFLVKSCGKLWILDRILIKLQRTGHRVLLFS 290
L+K CNHP + F D+ + D L ++ GK +LDRIL KL TGH+ L+F
Sbjct: 1155 LKKICNHPFI----FEDVERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTGHKTLMFF 1210
Query: 291 TMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGL 350
MT+++ I+E+YL+ + Y R+DG+T +DR S + FN SD +IF+LS RA G GL
Sbjct: 1211 QMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLSTRAGGLGL 1270
Query: 351 NLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSG 410
NLQ+ADTVII+D D NP + QA RAHRIGQ +EV+++ + + +K
Sbjct: 1271 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRL--ITEK------------- 1315
Query: 411 GTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETL 470
+E+++ + QYK+D+ +VI AG+FD ++T EER L +L
Sbjct: 1316 ---SIEENILSR---------------AQYKLDLDGKVIQAGKFDNKSTPEEREAFLRSL 1357
Query: 471 L-HDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDEE 510
L HD + + + E+N +I+R+++E+ LF ++D+E
Sbjct: 1358 LEHDGDDDHDLTYGELQDDELNELISRTDEELVLFKKLDKE 1398
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 364 bits (935), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 309/558 (55%), Gaps = 75/558 (13%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W E KW PSV + Y G+ R R F ++ + KFNVL+TTYE+I+ D+ L+K+
Sbjct: 807 LSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKI 865
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE RMK+ L + L+ Y RRLLLTGTPLQN L ELW+LLN LLP +F
Sbjct: 866 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 925
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
+ F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 926 KSCSTFEQWFNAPFAMTGEKVD-----LNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL 980
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C MSA+Q +Y ++A G L D ++ ++ KTL N M+
Sbjct: 981 PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK-------GKGGTKTLMNTIMQ 1033
Query: 240 LRKTCNHPLLNYPYFSDLSKDF---------------LVKSCGKLWILDRILIKLQRTGH 284
LRK CNHP + F + + F L ++ GK +LDRIL KL+ T H
Sbjct: 1034 LRKICNHPYM----FQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1089
Query: 285 RVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIR 344
+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN S+ FIFLLS R
Sbjct: 1090 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1149
Query: 345 AAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKE 404
A G GLNLQSADTVII+D D NP + QA RAHRIGQ+ EV+V+ + V+ +
Sbjct: 1150 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL-CTVNSVE----- 1203
Query: 405 DELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERR 464
E LA +YK+++ +VI AG FDQ+++ ERR
Sbjct: 1204 -----------EKILAAA----------------KYKLNVDQKVIQAGMFDQKSSSHERR 1236
Query: 465 MTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMD-----EEFGWIEEMTR 519
L+ +L EE+ +E + VN+MIAR E+E +LF +MD EE + R
Sbjct: 1237 AFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPR 1295
Query: 520 Y---DQVPKWLRASTKEV 534
D++P W+ EV
Sbjct: 1296 LMEEDELPSWIIKDDAEV 1313
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 364 bits (935), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 309/558 (55%), Gaps = 75/558 (13%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W E KW PSV + Y G+ R R F ++ + KFNVL+TTYE+I+ D+ L+K+
Sbjct: 815 LSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKI 873
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE RMK+ L + L+ Y RRLLLTGTPLQN L ELW+LLN LLP +F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
+ F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVD-----LNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL 988
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C MSA+Q +Y ++A G L D ++ ++ KTL N M+
Sbjct: 989 PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK-------GKGGTKTLMNTIMQ 1041
Query: 240 LRKTCNHPLLNYPYFSDLSKDF---------------LVKSCGKLWILDRILIKLQRTGH 284
LRK CNHP + F + + F L ++ GK +LDRIL KL+ T H
Sbjct: 1042 LRKICNHPYM----FQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097
Query: 285 RVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIR 344
+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN S+ FIFLLS R
Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157
Query: 345 AAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKE 404
A G GLNLQSADTVII+D D NP + QA RAHRIGQ+ EV+V+ + V+ +
Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL-CTVNSVE----- 1211
Query: 405 DELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERR 464
E LA +YK+++ +VI AG FDQ+++ ERR
Sbjct: 1212 -----------EKILAAA----------------KYKLNVDQKVIQAGMFDQKSSSHERR 1244
Query: 465 MTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMD-----EEFGWIEEMTR 519
L+ +L EE+ +E + VN+MIAR E+E +LF +MD EE + R
Sbjct: 1245 AFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPR 1303
Query: 520 Y---DQVPKWLRASTKEV 534
D++P W+ EV
Sbjct: 1304 LMEEDELPSWIIKDDAEV 1321
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 364 bits (934), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 224/558 (40%), Positives = 309/558 (55%), Gaps = 75/558 (13%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W E KW PSV + Y G+ R R F ++ + KFNVL+TTYE+I+ D+ L+K+
Sbjct: 815 LSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKI 873
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE RMK+ L + L+ Y RRLLLTGTPLQN L ELW+LLN LLP +F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
+ F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVD-----LNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL 988
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C MSA+Q +Y ++A G L D ++ ++ KTL N M+
Sbjct: 989 PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK-------GKGGTKTLMNTIMQ 1041
Query: 240 LRKTCNHPLLNYPYFSDLSKDF---------------LVKSCGKLWILDRILIKLQRTGH 284
LRK CNHP + F + + F L ++ GK +LDRIL KL+ T H
Sbjct: 1042 LRKICNHPYM----FQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097
Query: 285 RVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIR 344
+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN S+ FIFLLS R
Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157
Query: 345 AAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKE 404
A G GLNLQSADTVII+D D NP + QA RAHRIGQ+ EV+V+ + V+ +
Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL-CTVNSVE----- 1211
Query: 405 DELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERR 464
E LA +YK+++ +VI AG FDQ+++ ERR
Sbjct: 1212 -----------EKILAAA----------------KYKLNVDQKVIQAGMFDQKSSSHERR 1244
Query: 465 MTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMD-----EEFGWIEEMTR 519
L+ +L EE+ +E + VN+MIAR E+E +LF +MD EE + R
Sbjct: 1245 AFLQAILEHEEQDEEEDEVP-DDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPR 1303
Query: 520 Y---DQVPKWLRASTKEV 534
D++P W+ EV
Sbjct: 1304 LMEEDELPSWIIKDDAEV 1321
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 363 bits (933), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 228/590 (38%), Positives = 313/590 (53%), Gaps = 106/590 (17%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W E KW PSV + Y G+ R R F ++ + KFNVL+TTYE+I+ D+ L+K+
Sbjct: 815 LSNWAYEFDKWAPSVVKVSYKGSPAAR-RAFVPQLRSGKFNVLLTTYEYIIKDKHILAKI 873
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE RMK+ L + L+ Y RRLLLTGTPLQN L ELW+LLN LLP +F
Sbjct: 874 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF 933
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
+ F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 934 KSCSTFEQWFNAPFAMTGEKVD-----LNEEETILIIRRLHKVLRPFLLRRLKKEVEAQL 988
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C MSA+Q +Y ++A G L D ++ ++ KTL N M+
Sbjct: 989 PEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKK-------GKGGTKTLMNTIMQ 1041
Query: 240 LRKTCNHPLLNYPYFSDLSKDF---------------LVKSCGKLWILDRILIKLQRTGH 284
LRK CNHP + F + + F L ++ GK +LDRIL KL+ T H
Sbjct: 1042 LRKICNHPYM----FQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNH 1097
Query: 285 RVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIR 344
+VLLF MT L+ I+E+Y +R Y R+DGTT EDR + FN S+ FIFLLS R
Sbjct: 1098 KVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTR 1157
Query: 345 AAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKE 404
A G GLNLQSADTVII+D D NP + QA RAHRIGQ+ EV+V+ + V+ +
Sbjct: 1158 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRL-CTVNSVE----- 1211
Query: 405 DELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERR 464
E LA +YK+++ +VI AG FDQ+++ ERR
Sbjct: 1212 -----------EKILAAA----------------KYKLNVDQKVIQAGMFDQKSSSHERR 1244
Query: 465 MTLETLL----HDEERYQET-------VH---------------------DVPSLQEVNR 492
L+ +L DE R+ T H +VP + VN+
Sbjct: 1245 AFLQAILEHEEQDESRHCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQ 1304
Query: 493 MIARSEDEVELFDQMD-----EEFGWIEEMTRY---DQVPKWLRASTKEV 534
MIAR E+E +LF +MD EE + R D++P W+ EV
Sbjct: 1305 MIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDDAEV 1354
>sp|Q6DIC0|SMCA2_MOUSE Probable global transcription activator SNF2L2 OS=Mus musculus
GN=Smarca2 PE=1 SV=1
Length = 1577
Score = 363 bits (931), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 212/524 (40%), Positives = 296/524 (56%), Gaps = 67/524 (12%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W E KW PSV I Y G R L Q + + KFNVL+TTYE+I+ D+ L+K+
Sbjct: 790 LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHILAKI 848
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE RMK+ L + L+ Y RR+LLTGTPLQN L ELW+LLN LLP +F
Sbjct: 849 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 908
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
+ F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 909 KSCSTFEQWFNAPFAMTGERVD-----LNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 963
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C MSA+Q +Y ++A G L D ++ ++ KTL N M+
Sbjct: 964 PEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKK-------GKGGAKTLMNTIMQ 1016
Query: 240 LRKTCNHPLLNYPYFSDLSKDF---------------LVKSCGKLWILDRILIKLQRTGH 284
LRK CNHP + F + + F L ++ GK +LDRIL KL+ T H
Sbjct: 1017 LRKICNHPYM----FQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNH 1072
Query: 285 RVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIR 344
RVLLF MT L+ I+E+Y +R +Y R+DGTT EDR + + FN S FIFLLS R
Sbjct: 1073 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1132
Query: 345 AAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKE 404
A G GLNLQ+ADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V + E
Sbjct: 1133 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV------NSVE 1186
Query: 405 DELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERR 464
+++ + +YK+++ +VI AG FDQ+++ ERR
Sbjct: 1187 EKILAAA---------------------------KYKLNVDQKVIQAGMFDQKSSSHERR 1219
Query: 465 MTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMD 508
L+ +L EE +E + +N+MIAR E+E +LF +MD
Sbjct: 1220 AFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFDLFMRMD 1262
>sp|P51531|SMCA2_HUMAN Probable global transcription activator SNF2L2 OS=Homo sapiens
GN=SMARCA2 PE=1 SV=2
Length = 1590
Score = 362 bits (930), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 212/524 (40%), Positives = 296/524 (56%), Gaps = 67/524 (12%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W E KW PSV I Y G R L Q + + KFNVL+TTYE+I+ D+ L+K+
Sbjct: 785 LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQ-LRSGKFNVLLTTYEYIIKDKHILAKI 843
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE RMK+ L + L+ Y RR+LLTGTPLQN L ELW+LLN LLP +F
Sbjct: 844 RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF 903
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
+ F WF+ PF G + L E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 904 KSCSTFEQWFNAPFAMTGERVD-----LNEEETILIIRRLHKVLRPFLLRRLKKEVESQL 958
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C MSA+Q +Y ++A G L D ++ ++ KTL N M+
Sbjct: 959 PEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKK-------GKGGAKTLMNTIMQ 1011
Query: 240 LRKTCNHPLLNYPYFSDLSKDF---------------LVKSCGKLWILDRILIKLQRTGH 284
LRK CNHP + F + + F L ++ GK +LDRIL KL+ T H
Sbjct: 1012 LRKICNHPYM----FQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNH 1067
Query: 285 RVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIR 344
RVLLF MT L+ I+E+Y +R +Y R+DGTT EDR + + FN S FIFLLS R
Sbjct: 1068 RVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTR 1127
Query: 345 AAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKE 404
A G GLNLQ+ADTV+I+D D NP + QA RAHRIGQ+ EV+V+ + V + E
Sbjct: 1128 AGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV------NSVE 1181
Query: 405 DELRSGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERR 464
+++ + +YK+++ +VI AG FDQ+++ ERR
Sbjct: 1182 EKILAAA---------------------------KYKLNVDQKVIQAGMFDQKSSSHERR 1214
Query: 465 MTLETLLHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMD 508
L+ +L EE +E + +N+MIAR E+E +LF +MD
Sbjct: 1215 AFLQAILEHEEENEEEDEVP-DDETLNQMIARREEEFDLFMRMD 1257
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 356 bits (914), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 213/522 (40%), Positives = 301/522 (57%), Gaps = 62/522 (11%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
++ W E +W PS+ I Y G R L Q V F VL+TTYE+I+ DR LS++
Sbjct: 478 LTNWTMEFERWAPSIVKIVYKGPPQVRKALHPQ-VRHSNFQVLLTTYEYIIKDRPLLSRI 536
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRYRCQR-RLLLTGTPLQNDLKELWSLLNLLLPEVF 119
W Y+IIDE RMK+ +S L L Y R RL+LTGTPLQN+L ELW+LLN +LP +F
Sbjct: 537 KWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFVLPRIF 596
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
++ K+F +WF+ PF G D L E+ +++I RLH++L PF+LRR +DVE L
Sbjct: 597 NSIKSFDEWFNTPFANTG---GQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEAEL 653
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V+RC+MS +Q +Y +K G L V ED KR K I K L N M+
Sbjct: 654 PDKVEKVIRCQMSGLQQKLYYQMKKHGMLYV--EDAKR--GKTGI------KGLQNTVMQ 703
Query: 240 LRKTCNHPLLNYPYFSDLSK---------DFLVKSCGKLWILDRILIKLQRTGHRVLLFS 290
L+K CNHP + F D+ + D L + GK +LDRIL KL R+GHR+L+F
Sbjct: 704 LKKICNHPFV----FEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFF 759
Query: 291 TMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGL 350
MT++++I+E+YL +RQ Y R+DG+T +DR + FN ++ +FLLS RA G GL
Sbjct: 760 QMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGL 819
Query: 351 NLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSG 410
NLQ+ADTVII+D D NP + QA RAHRIGQ +EV++ + + +K
Sbjct: 820 NLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRL--ITEK------------- 864
Query: 411 GTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETL 470
+E+++ + QYK+D+ +VI AG+FD ++T EER L +L
Sbjct: 865 ---SVEENILAR---------------AQYKLDIDGKVIQAGKFDNKSTPEEREAFLRSL 906
Query: 471 LHDEERYQETVHDVP-SLQEVNRMIARSEDEVELFDQMDEEF 511
L +E +E E+N ++AR +DE+ LF QM E+
Sbjct: 907 LENENGEEENDEKGELDDDELNEILARGDDELRLFKQMTEDL 948
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 352 bits (903), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 208/520 (40%), Positives = 300/520 (57%), Gaps = 59/520 (11%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
++ W E KW PS++ I Y G +QR L ++ F+VL+TTYE+I+ D+S LSK
Sbjct: 531 ITNWTLEFEKWAPSLNTIIYKGTPNQRHSL-QHQIRVGNFDVLLTTYEYIIKDKSLLSKH 589
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRY-RCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
DW ++IIDE RMK+ +S L+ + Y R + RL+LTGTPLQN+L ELW+LLN +LP++F
Sbjct: 590 DWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIF 649
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
++ K F DWF+ PF G + E+ ++II RLH++L PF+LRR ++VE L
Sbjct: 650 NSAKTFEDWFNTPFANTGTQEKLEL---TEEETLLIIRRLHKVLRPFLLRRLKKEVEKDL 706
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C++S +Q +Y + L V E K I K LNN+ M+
Sbjct: 707 PDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEG--ATKGGI------KGLNNKIMQ 758
Query: 240 LRKTCNHPLLNYPYFSDL---------SKDFLVKSCGKLWILDRILIKLQRTGHRVLLFS 290
LRK CNHP + F ++ + D L + GK +LDR+L K + +GHRVL+F
Sbjct: 759 LRKICNHPFV----FDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFF 814
Query: 291 TMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGL 350
MT+++DI+E++L+ + L Y R+DG+T E+R + FN+ DSD F FLLS RA G GL
Sbjct: 815 QMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGL 874
Query: 351 NLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSG 410
NLQ+ADTVII+D D NP + QA RAHRIGQK EV+++ +
Sbjct: 875 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL------------------- 915
Query: 411 GTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETL 470
T D S+E +I Q K+D+ +VI AG+FD ++T EE+ L L
Sbjct: 916 ITTD-------------SVEEVILERAMQ-KLDIDGKVIQAGKFDNKSTAEEQEAFLRRL 961
Query: 471 LHDEERYQETVHDVPSLQEVNRMIARSEDEVELFDQMDEE 510
+ E + E+N +ARS DE LFD++D+E
Sbjct: 962 IESETNRDDDDKAELDDDELNDTLARSADEKILFDKIDKE 1001
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 349 bits (896), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 199/532 (37%), Positives = 317/532 (59%), Gaps = 66/532 (12%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W SE KW P++ I + G+ ++R + ++ A +F+V++TT+E+I+ +R+ LSKV
Sbjct: 828 LSNWSSEFAKWAPTLRTISFKGSPNER-KAKQAKIRAGEFDVVLTTFEYIIKERALLSKV 886
Query: 61 DWKYIIIDEAQRMKDRESVLARDLD-RYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
W ++IIDE RMK+ +S L+ L+ Y RL+LTGTPLQN+L ELW+LLN +LP++F
Sbjct: 887 KWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIF 946
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
++ K+F +WF+ PF G D L E+ +++I RLH++L PF+LRR +DVE L
Sbjct: 947 NSVKSFDEWFNTPFANTG---GQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKEL 1003
Query: 180 PPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCME 239
P KV V++C+MSA+Q +Y + L + ++ K+ V + NN+ M+
Sbjct: 1004 PDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVG---------LRGFNNQIMQ 1054
Query: 240 LRKTCNHPLLNYPYFSDL---------SKDFLVKSCGKLWILDRILIKLQRTGHRVLLFS 290
L+K CNHP + F ++ + D + + GK +LDRIL KL+ TGHRVL+F
Sbjct: 1055 LKKICNHPFV----FEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFF 1110
Query: 291 TMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGL 350
MT+++DI+E++L++ + Y R+DG T ++R + FN+ DS+ F+LS RA G GL
Sbjct: 1111 QMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGL 1170
Query: 351 NLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSG 410
NLQ+ADTVII+D D NP + QA RAHRIGQK EV+++ + I+++
Sbjct: 1171 NLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRL------ITTN--------- 1215
Query: 411 GTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINAGRFDQRTTHEERRMTLETL 470
S+E +I + K+D+ +VI AG+FD ++T EE+ L +L
Sbjct: 1216 -----------------SVEEVILERAYK-KLDIDGKVIQAGKFDNKSTSEEQEALLRSL 1257
Query: 471 LHDEE----RYQETVHDVPSLQ--EVNRMIARSEDEVELFDQMDEEFGWIEE 516
L EE + + V + L+ E+N ++AR+++E+ + +MDE+ EE
Sbjct: 1258 LDAEEERRKKRESGVEEEEELKDSEINEILARNDEEMAVLTRMDEDRSKKEE 1309
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/394 (42%), Positives = 233/394 (59%), Gaps = 40/394 (10%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W +E +W+PS+ I +VG KD R+ E+ +++V VT+YE ++ ++S K W+
Sbjct: 251 WMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 310
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELW+LLN LLP+VF++
Sbjct: 311 YLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 370
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F WF T N D ++ RLH +L+PF+LRR DVE SLPPK
Sbjct: 371 DFDSWFD--------TKNCLGDQK-------LVERLHAVLKPFLLRRIKTDVEKSLPPKK 415
Query: 184 SIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELR 241
I + +S +Q Y I K L + +K R L N M+LR
Sbjct: 416 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR--------------LLNILMQLR 461
Query: 242 KTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKL 295
K CNHP L PY +D + +V + GK+ LD++L +++ G RVL+FS MT+L
Sbjct: 462 KCCNHPYLFDGAEPGPPYTTD---EHIVGNSGKMVALDKLLARIKEQGSRVLIFSQMTRL 518
Query: 296 LDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSA 355
LDILE+Y WR Y R+DG T E+RE AI FN+ +S FIF+LS RA G G+NL SA
Sbjct: 519 LDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSKFIFMLSTRAGGLGINLASA 578
Query: 356 DTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
D VI+YD D NP+ + QA+ RAHRIGQK+ V+V
Sbjct: 579 DVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 612
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 298 bits (762), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 244/391 (62%), Gaps = 33/391 (8%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W+ E KW P+V+ + G KD R+ + + +F+VL+T+YE ++ +++ L ++ W+
Sbjct: 248 WRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQ 307
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
YI+IDEA R+K+ +S L++ + + + RLL+TGTPLQN+L ELW+LLN LLP++F + +
Sbjct: 308 YIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSE 367
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F +WF Q +N++ D + I+I +LH +L PF+LRR DVE SL PK+
Sbjct: 368 LFDEWFEQ--------NNSEQD------QEIVIQQLHSVLNPFLLRRVKADVEKSLLPKI 413
Query: 184 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 243
+ M+ +Q W K+ +D + + + + L N M+LRK
Sbjct: 414 ETNVYVGMTDMQ---IQWYKSLLEKDIDAVN-------GAVGKREGKTRLLNIVMQLRKC 463
Query: 244 CNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 297
CNHP L PY +D + L+ + GK+ ILD++L +L+ G RVL+FS M++LLD
Sbjct: 464 CNHPYLFEGAEPGPPYTTD---EHLIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLD 520
Query: 298 ILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADT 357
ILE+Y +R Y RIDG+TS E+R AI ++N +S+ F+FLL+ RA G G+NL +ADT
Sbjct: 521 ILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADT 580
Query: 358 VIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
VI++D D NP+ + QA+ RAHRIGQK++V V
Sbjct: 581 VILFDSDWNPQADLQAMDRAHRIGQKKQVHV 611
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 166/446 (37%), Positives = 259/446 (58%), Gaps = 40/446 (8%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W +E KW PS++ + +G + R+++ + KF+V TTYE ++ +++L K++W+
Sbjct: 196 WANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWR 255
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
YIIIDEA R+K+ +S L+ + + RLL+TGTPLQN+L ELW+LLN LLP++F +
Sbjct: 256 YIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELWALLNFLLPDIFTSSD 315
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F WFS + + N D ++ RLH++L+PF+LRR DVE SL PK
Sbjct: 316 DFDSWFSN----DAMSGNTD-----------LVQRLHKVLQPFLLRRIKSDVEKSLLPKK 360
Query: 184 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 243
+ + +S +Q +W +D + +V+K L N M LRK
Sbjct: 361 EVKVYVGLSKMQR---EWYTKVLMKDIDIINGAGKVEK---------ARLMNILMHLRKC 408
Query: 244 CNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 297
NHP L P+ +D LV + GK+ +LD++L+K + G RVL+FS +++LD
Sbjct: 409 VNHPYLFDGAEPGPPFTTD---QHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLD 465
Query: 298 ILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADT 357
+LE++ WR Y R+DG+T EDR +AI +N+ DS FIF+L+ RA G G+NL +AD
Sbjct: 466 LLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADV 525
Query: 358 VIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM--EAVVDKISSHQKEDELRSGGTVDL 415
VIIYD D NP+++ QA+ RAHRIGQK++V+V + E VD+ + E +LR V
Sbjct: 526 VIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQ 585
Query: 416 EDDLAGKDRYIGS--IEGLIRNNIQQ 439
+ ++ + +G + +IR+ +Q
Sbjct: 586 QGRMSEAQKTLGKGDMISMIRHGAEQ 611
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 293 bits (750), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 170/406 (41%), Positives = 236/406 (58%), Gaps = 52/406 (12%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W +E +W+PS+ I +VG KD R+ E+ +++V VT+YE ++ ++S K W+
Sbjct: 247 WMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWR 306
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELW+LLN LLP+VF++
Sbjct: 307 YLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAD 366
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F WF T N D +K ++ RLH +L+PF+LRR DVE SLPPK
Sbjct: 367 DFDSWFD--------TKNCLGD----QK---LVERLHAVLKPFLLRRIKTDVEKSLPPKK 411
Query: 184 SIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELR 241
I + +S +Q Y I K L + +K R L N M+LR
Sbjct: 412 EIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMR--------------LLNILMQLR 457
Query: 242 KTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKL 295
K CNHP L PY +D + +V + GK+ +LD++L KL+ G RVL+FS MT+L
Sbjct: 458 KCCNHPYLFDGAEPGPPYTTD---EHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMTRL 514
Query: 296 LDILEEYLQWRQLVYRRIDGTTSLEDRE------------SAIVDFNSHDSDCFIFLLSI 343
LDILE+Y WR Y R+DG T E+RE AI FN+ +S FIF+LS
Sbjct: 515 LDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLST 574
Query: 344 RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
RA G G+NL SAD VI+YD D NP+ + QA+ RAHRIGQK+ V+V
Sbjct: 575 RAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 620
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 293 bits (750), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/463 (37%), Positives = 256/463 (55%), Gaps = 45/463 (9%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W +E KW PS+ + +G +D R+ + +++V VT+YE + ++S K +W+
Sbjct: 192 WVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMPGEWDVCVTSYEMCIREKSVFKKFNWR 251
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
Y++IDEA R+K+ +S L+ L ++ RLL+TGTPLQN+L ELW+LLN LLP+VF++ +
Sbjct: 252 YLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNFLLPDVFNSSE 311
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F +WF+ T DD +I RLH +L+PF+LRR +VE L PK
Sbjct: 312 DFDEWFNTN------TCLGDD---------ALITRLHAVLKPFLLRRLKAEVEKRLKPKK 356
Query: 184 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 243
+ + +S +Q DW +D + +V+K L N M+LRK
Sbjct: 357 EMKIFVGLSKMQR---DWYTKVLLKDIDVVNGAGKVEK---------MRLQNILMQLRKC 404
Query: 244 CNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 297
NHP L PY +D LV + GK+ ILD++L KLQ G RVL+FS MT++LD
Sbjct: 405 TNHPYLFDGAEPGPPYTTDTH---LVYNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLD 461
Query: 298 ILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADT 357
ILE+Y WR Y R+DG T EDR I +FN +S F+F+LS RA G G+NL +AD
Sbjct: 462 ILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADV 521
Query: 358 VIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM-------EAVVDKISSHQKEDEL--R 408
VIIYD D NP+ + QA+ RAHRIGQK++V+V + E +V++ + D++ +
Sbjct: 522 VIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVERAEVKLRLDKMVIQ 581
Query: 409 SGGTVDLEDDLAGKDRYIGSIEGLIRNNIQQYKIDMADEVINA 451
G VD + KD + I + D+ DE I+
Sbjct: 582 GGRLVDNRSNQLNKDEMLNIIRFGANQVFSSKETDITDEDIDV 624
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/396 (43%), Positives = 246/396 (62%), Gaps = 35/396 (8%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
++ W E+++W P V+ G K++R+ L +++ F+V++ +YE I+ ++S L K+
Sbjct: 257 LNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKI 316
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFD 120
+W+YIIIDEA R+K+ ES+L++ L + + RLL+TGTPLQN+L ELW+LLN LLP++F
Sbjct: 317 NWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFS 376
Query: 121 NRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP 180
+ + F DWFS +E D D I+ +LH +L+PF+LRR DVE SL
Sbjct: 377 DAQDFDDWFSSESTEE------DQD--------KIVKQLHTVLQPFLLRRIKSDVETSLL 422
Query: 181 PKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKT-LNNRCME 239
PK + L MS++Q Y I EK N +K KT L N M+
Sbjct: 423 PKKELNLYVGMSSMQKKWYKKIL-----------EKDLDAVNGSNGSKESKTRLLNIMMQ 471
Query: 240 LRKTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMT 293
LRK CNHP L PY +D + LV + KL +LD++L KL+ G RVL+FS M+
Sbjct: 472 LRKCCNHPYLFDGAEPGPPYTTD---EHLVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMS 528
Query: 294 KLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQ 353
+LLDILE+Y +R Y RIDG+T+ EDR AI D+N+ DS F+FLL+ RA G G+NL
Sbjct: 529 RLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLT 588
Query: 354 SADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
SAD V++YD D NP+ + QA+ RAHRIGQK++VKV
Sbjct: 589 SADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVF 624
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 291 bits (744), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 250/443 (56%), Gaps = 49/443 (11%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W SE KW+P++ + +G K+QR+ + +++V VT+YE ++ ++S K +W+
Sbjct: 243 WMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWR 302
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELWSLLN LLP+VF++
Sbjct: 303 YLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSAD 362
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F WF T+N D ++ RLH +L PF+LRR DVE SLPPK
Sbjct: 363 DFDSWFD--------TNNCLGD-------QKLVERLHMVLRPFLLRRIKADVEKSLPPKK 407
Query: 184 SIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELR 241
+ + +S +Q Y I K L + +K R L N M+LR
Sbjct: 408 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR--------------LLNILMQLR 453
Query: 242 KTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKL 295
K CNHP L PY +D+ LV + GK+ +LD++L KL+ G RVL+FS MT++
Sbjct: 454 KCCNHPYLFDGAEPGPPYTTDMH---LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRV 510
Query: 296 LDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSA 355
LDILE+Y WR Y R+DG T ++R+ +I +N +S F+F+LS RA G G+NL +A
Sbjct: 511 LDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATA 570
Query: 356 DTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM-------EAVVDKISSHQKEDE-- 406
D VI+YD D NP+ + QA+ RAHRIGQ + V+V E +V++ + D
Sbjct: 571 DVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIV 630
Query: 407 LRSGGTVDLEDDLAGKDRYIGSI 429
++ G VD + GKD + I
Sbjct: 631 IQQGRLVDQNLNKIGKDEMLQMI 653
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 290 bits (743), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 250/443 (56%), Gaps = 49/443 (11%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W SE +W+P++ + +G K+QR+ + +++V VT+YE ++ ++S K +W+
Sbjct: 244 WMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWR 303
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
Y++IDEA R+K+ +S L+ + ++ RLLLTGTPLQN+L ELWSLLN LLP+VF++
Sbjct: 304 YLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSAD 363
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F WF T+N D ++ RLH +L PF+LRR DVE SLPPK
Sbjct: 364 DFDSWFD--------TNNCLGD-------QKLVERLHMVLRPFLLRRIKADVEKSLPPKK 408
Query: 184 SIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELR 241
+ + +S +Q Y I K L + +K R L N M+LR
Sbjct: 409 EVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMR--------------LLNILMQLR 454
Query: 242 KTCNHPLL------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKL 295
K CNHP L PY +D+ LV + GK+ +LD++L KL+ G RVL+FS MT++
Sbjct: 455 KCCNHPYLFDGAEPGPPYTTDMH---LVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRV 511
Query: 296 LDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSA 355
LDILE+Y WR Y R+DG T ++R+ +I +N +S F+F+LS RA G G+NL +A
Sbjct: 512 LDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATA 571
Query: 356 DTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM-------EAVVDKISSHQKEDE-- 406
D VI+YD D NP+ + QA+ RAHRIGQ + V+V E +V++ + D
Sbjct: 572 DVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIV 631
Query: 407 LRSGGTVDLEDDLAGKDRYIGSI 429
++ G VD + GKD + I
Sbjct: 632 IQQGRLVDQNLNKIGKDEMLQMI 654
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/405 (40%), Positives = 231/405 (57%), Gaps = 47/405 (11%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-------AALKFNVLVTTYEFIMYD 53
M+ WQ E W P ++ + Y+G D +SR Q+ LKFN ++TTYE ++ D
Sbjct: 589 MTAWQREFDLWAPDMNVVTYLG--DIKSRELIQQYEWQFESSKRLKFNCILTTYEIVLKD 646
Query: 54 RSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNL 113
+ L + W +++DEA R+K+ +S+L + L + RLL+TGTPLQN LKELW+LL+
Sbjct: 647 KQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHF 706
Query: 114 LLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVE 173
++P+ FD + F E NA+D RLHQ LEP++LRR +
Sbjct: 707 IMPDKFDTWENF----------EVQHGNAEDKGYT---------RLHQQLEPYILRRVKK 747
Query: 174 DVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTL 233
DVE SLP KV +LR M+++Q Y WI D R+ ++ T
Sbjct: 748 DVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNF------DALRKGKRGST------STF 795
Query: 234 NNRCMELRKTCNHPLLNYPYFSDL-------SKDFLVKSCGKLWILDRILIKLQRTGHRV 286
N +EL+K CNH L P +L + L+K GKL +LD++L +L+ TGHRV
Sbjct: 796 LNIVIELKKCCNHAALIRPSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKETGHRV 855
Query: 287 LLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAA 346
L+FS M ++LD+L +YLQ R ++R+DG+ E R A+ FN+ S F FLLS RA
Sbjct: 856 LIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLSTRAG 915
Query: 347 GRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 391
G G+NL +ADTVII+D D NP+N+ QA ARAHRIGQK +V + +
Sbjct: 916 GLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRL 960
>sp|Q9NRZ9|HELLS_HUMAN Lymphoid-specific helicase OS=Homo sapiens GN=HELLS PE=1 SV=1
Length = 838
Score = 285 bits (728), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 177/485 (36%), Positives = 259/485 (53%), Gaps = 67/485 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRL---FSQEVAALKFN-VLVTTYEFIMYDRSKLSK 59
W +E ++ P + + Y G +++R +L + L+ + V++T++E M DR+ L
Sbjct: 286 WMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMRDRNALQH 345
Query: 60 VDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE R+K+ + L R+L R+ +LLLTGTPLQN+L ELWSLLN LLP+VF
Sbjct: 346 CYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVF 405
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
D+ K+F WF E +D + E++ ++H LHQIL PF+LRR DV +
Sbjct: 406 DDLKSFESWFDITSLSE-----TAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEV 460
Query: 180 PPKVSIVLRCRMSAIQSAIYDWI------------------------------KATGTLR 209
PPK +V+ +S Q Y I K+ +
Sbjct: 461 PPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKSINYSK 520
Query: 210 VD--------------PEDEKRR--VQKNPIYQAKVYKTLNNRCMELRKTCNHP-LLNYP 252
+D PE ++ R V+ N +++V L N M LRK CNHP L+ YP
Sbjct: 521 IDDFPNELEKLISQIQPEVDRERAVVEVNIPVESEVNLKLQNIMMLLRKCCNHPYLIEYP 580
Query: 253 YFSDLSKDF-----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 307
++++F LV + GK ILDR+L +L++ GH+VLLFS MT +LDIL +Y R
Sbjct: 581 -IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRD 639
Query: 308 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 367
+ R+DG+ S +RE + FN+ D + FIFL+S RA G G+NL +ADTVIIYD D NP
Sbjct: 640 FNFSRLDGSMSYSEREKNMHSFNT-DPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNP 698
Query: 368 KNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIG 427
+++ QA R HRIGQ + V V+Y + I E R+ LE + K+ + G
Sbjct: 699 QSDLQAQDRCHRIGQTKPV-VVYRLVTANTIDQKIVE---RAAAKRKLEKLIIHKNHFKG 754
Query: 428 SIEGL 432
GL
Sbjct: 755 GQSGL 759
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/408 (38%), Positives = 235/408 (57%), Gaps = 54/408 (13%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRL-----FSQEVAALKFNVLVTTYEFIMYDRS 55
++ WQ E W P ++ + Y+G R+ + + LKFN L+TTYE ++ D++
Sbjct: 545 LTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALITTYEILLKDKT 604
Query: 56 KLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLL 115
L ++W ++ +DEA R+K+ +S+L + L ++ RLL+TGTPLQN LKELWSLL+ ++
Sbjct: 605 VLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM 664
Query: 116 PEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV 175
PE F+ F + F+++ + LH++LEPF+LRR +DV
Sbjct: 665 PEKFE--------FWEDFEEDHGKGRENG-----------YQSLHKVLEPFLLRRVKKDV 705
Query: 176 EGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKT--- 232
E SLP KV +LR MSA+Q Y WI + +N Y+A T
Sbjct: 706 EKSLPAKVEQILRVEMSALQKQYYKWI----------------LTRN--YKALAKGTRGS 747
Query: 233 ---LNNRCMELRKTCNHPLLNYPYFSDLSKD------FLVKSCGKLWILDRILIKLQRTG 283
N MEL+K CNH L P + ++ L++S GKL +LD++L +L+ G
Sbjct: 748 TSGFLNIVMELKKCCNHCYLIKPPEENERENGQEILLSLIRSSGKLILLDKLLTRLRERG 807
Query: 284 HRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSI 343
+RVL+FS M ++LDIL EYL + ++R+DG+ E R+ A+ FN+ S+ F FLLS
Sbjct: 808 NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLST 867
Query: 344 RAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 391
RA G G+NL SADTV+I+D D NP+N+ QA ARAHRIGQK++V + +
Sbjct: 868 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRL 915
>sp|Q60848|HELLS_MOUSE Lymphocyte-specific helicase OS=Mus musculus GN=Hells PE=1 SV=2
Length = 821
Score = 283 bits (724), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 176/485 (36%), Positives = 257/485 (52%), Gaps = 67/485 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRL---FSQEVAALKFN-VLVTTYEFIMYDRSKLSK 59
W +E ++ P + + Y G ++ R +L + L+ + V+VT++E M D++ L
Sbjct: 269 WMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVTSFEIAMRDQNALQH 328
Query: 60 VDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVF 119
WKY+I+DE R+K+ + L R+L R+ +LLLTGTPLQN+L ELWSLLN LLP+VF
Sbjct: 329 CYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVF 388
Query: 120 DNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSL 179
D+ K+F WF E +D + E++ ++H LHQIL PF+LRR DV +
Sbjct: 389 DDLKSFESWFDITSLSE-----TAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEV 443
Query: 180 PPKVSIVLRCRMSAIQSAIYDWI-------------KATGTL------------------ 208
PPK +V+ + Q Y I K T L
Sbjct: 444 PPKREVVVYAPLCNKQEIFYTAIVNRTIANMFGSCEKETVELSPTGRPKRRSRKSINYSE 503
Query: 209 -------------RVDPEDEKRR--VQKNPIYQAKVYKTLNNRCMELRKTCNHP-LLNYP 252
++ PE + R V+ N +++V L N M LRK CNHP ++ YP
Sbjct: 504 LDQFPSELEKLISQIQPEVNRERTVVEGNIPIESEVNLKLRNIMMLLRKCCNHPYMIEYP 563
Query: 253 YFSDLSKDF-----LVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQ 307
++++F LV + GK ILDR+L +L++ GH+VL+FS MT +LDIL +Y R
Sbjct: 564 -IDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRN 622
Query: 308 LVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNP 367
++ R+DG+ S +RE I FN+ D D F+FL+S RA G G+NL +ADTVIIYD D NP
Sbjct: 623 FIFSRLDGSMSYSEREKNIYSFNT-DPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNP 681
Query: 368 KNEEQAVARAHRIGQKREVKVIYMEAVVDKISSHQKEDELRSGGTVDLEDDLAGKDRYIG 427
+++ QA R HRIGQ + V V+Y + I E R+ LE + K+ + G
Sbjct: 682 QSDLQAQDRCHRIGQTKPV-VVYRLVTANTIDQKIVE---RAAAKRKLEKLIIHKNHFKG 737
Query: 428 SIEGL 432
GL
Sbjct: 738 GQSGL 742
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 281 bits (718), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 236/395 (59%), Gaps = 38/395 (9%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+ W E+ ++ P + + ++G ++R+ + + KF+V VT++E + +++ L +
Sbjct: 292 LGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRF 351
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFD 120
W+YIIIDEA R+K+ S+L++ + Y RLL+TGTPLQN+L ELWSLLN LLPE+F
Sbjct: 352 SWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFS 411
Query: 121 NRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP 180
+ + F +WF + ++D E ++ +LH++L PF+LRR DVE LP
Sbjct: 412 SAETFDEWFQ---------ISGENDQQE------VVQQLHKVLRPFLLRRLKSDVEKGLP 456
Query: 181 PKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMEL 240
PK +L+ MS +Q Y + ++ E++R L N M+L
Sbjct: 457 PKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKR--------------LLNIAMQL 502
Query: 241 RKTCNHPLLNY------PYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTK 294
RK CNHP L PY + + LV++ GK+ +LD++L KL+ RVL+FS MT+
Sbjct: 503 RKCCNHPYLFQGAEPGPPY---TTGEHLVENAGKMVLLDKLLPKLKDRDSRVLIFSQMTR 559
Query: 295 LLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS 354
LLDILE+YL +R Y RIDG T EDR+++I FN S+ F+FLLS RA G G+NL +
Sbjct: 560 LLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLAT 619
Query: 355 ADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
AD V++YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 620 ADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVF 654
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 280 bits (716), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 236/392 (60%), Gaps = 38/392 (9%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W +E+ ++ P + + ++G ++R + + A KF++ VT++E + +++ L + W+
Sbjct: 253 WMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTSFEMAIKEKTALRRFSWR 312
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
YIIIDEA R+K+ S+L++ + + RLL+TGTPLQN+L ELW+LLN LLPE+F + +
Sbjct: 313 YIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAE 372
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
F +WF + ++D E ++ +LH++L PF+LRR DVE LPPK
Sbjct: 373 TFDEWFQ---------ISGENDQQE------VVQQLHKVLRPFLLRRLKSDVEKGLPPKK 417
Query: 184 SIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELRKT 243
+L+ MS +Q Y + V+ E++R L N M+LRK
Sbjct: 418 ETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKR--------------LLNIAMQLRKC 463
Query: 244 CNHPLLNY------PYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLD 297
CNHP L PY + D L+ + GK+ +LD++L KL+ RVL+FS MT+LLD
Sbjct: 464 CNHPYLFQGAEPGPPY---TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLD 520
Query: 298 ILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSADT 357
ILE+YL +R +Y RIDG T ++R+++I +N S+ F+FLLS RA G G+NL +AD
Sbjct: 521 ILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADV 580
Query: 358 VIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
VI+YD D NP+ + QA RAHRIGQK+EV+V
Sbjct: 581 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 612
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 274 bits (700), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/399 (41%), Positives = 238/399 (59%), Gaps = 42/399 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQE-----VAALKFNVLVTTYEFIMYDRS 55
++ WQ E+ W P ++ + Y+G R+ + + E LKFN+L+TTYE ++ D+S
Sbjct: 538 LTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKS 597
Query: 56 KLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLL 115
L ++W +I +DEA R+K+ +S+L + L ++ RLL+TGTPLQN LKELWSLL+ ++
Sbjct: 598 FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM 657
Query: 116 PEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV 175
PE F + W + F++E H ++ LH+ LEPF+LRR +DV
Sbjct: 658 PEKFSS------W--EDFEEE---HGKGREYGYAS--------LHKELEPFLLRRVKKDV 698
Query: 176 EGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNN 235
E SLP KV +LR MSA+Q Y WI T + + K N
Sbjct: 699 EKSLPAKVEQILRMEMSALQKQYYKWI-LTRNYKALSKGSKGSTS-----------GFLN 746
Query: 236 RCMELRKTCNHPLLNYP------YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLF 289
MEL+K CNH L P Y + L++S GKL +LD++LI+L+ G+RVL+F
Sbjct: 747 IMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIF 806
Query: 290 STMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRG 349
S M ++LDIL EYL++RQ ++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G
Sbjct: 807 SQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLG 866
Query: 350 LNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
+NL SADTV+I+D D NP+N+ QA ARAHRIGQK++V +
Sbjct: 867 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNI 905
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 270 bits (689), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 42/399 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQE-----VAALKFNVLVTTYEFIMYDRS 55
++ WQ E+ W ++ + Y+G + R+ + + E LKFN+L+TTYE ++ D++
Sbjct: 542 LTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLKDKA 601
Query: 56 KLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLL 115
L ++W +I +DEA R+K+ +S+L + L ++ RLL+TGTPLQN LKELWSLL+ ++
Sbjct: 602 FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM 661
Query: 116 PEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV 175
PE F + W + F++E H ++ LH+ LEPF+LRR +DV
Sbjct: 662 PEKFSS------W--EDFEEE---HGKGREYGYAS--------LHKELEPFLLRRVKKDV 702
Query: 176 EGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNN 235
E SLP KV +LR MSA+Q Y WI T + + K N
Sbjct: 703 EKSLPAKVEQILRMEMSALQKQYYKWI-LTRNYKALSKGSKGSTS-----------GFLN 750
Query: 236 RCMELRKTCNHPLLNYP------YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLF 289
MEL+K CNH L P Y + L++S GKL +LD++LI+L+ G+RVL+F
Sbjct: 751 IMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIF 810
Query: 290 STMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRG 349
S M ++LDIL EYL++RQ ++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G
Sbjct: 811 SQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLG 870
Query: 350 LNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
+NL SADTV+I+D D NP+N+ QA ARAHRIGQK++V +
Sbjct: 871 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNI 909
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 160/401 (39%), Positives = 232/401 (57%), Gaps = 44/401 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRS--RLFSQEVAA---LKFNVLVTTYEFIMYDRS 55
M+ WQ E +W P ++ + Y+G R R F ++ LKFN ++TTYE ++ DR
Sbjct: 266 MTAWQREFQQWAPDINVVTYIGDVSSRDIIRQFEWSFSSSKRLKFNAILTTYEILLKDRQ 325
Query: 56 KLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLL 115
L W +++DEA R+K+ +S+L + L + RLL+TGTPLQN LKELW+LL+ ++
Sbjct: 326 FLRSFSWACLLVDEAHRLKNDDSLLYKALKEFDTNHRLLVTGTPLQNSLKELWALLHFIM 385
Query: 116 PEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV 175
P F++ + F + ++ T + +LH+ LEPF+LRR+ +DV
Sbjct: 386 PYKFESWEDF-----EKDHEDAATKGYE--------------KLHKQLEPFILRRQKKDV 426
Query: 176 EGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNN 235
E SLP KV +LR M++IQ Y WI + R+ K I T N
Sbjct: 427 EKSLPAKVEQILRVEMTSIQKQYYKWILTKNYSAL------RKGVKGSI------NTFIN 474
Query: 236 RCMELRKTCNHPLLNYP--------YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVL 287
+EL+K CNH LL P + + + L++ GKL +LD++L +L+ TGHRVL
Sbjct: 475 IVIELKKCCNHALLTKPEDFESRASLATSDAVEKLLRGSGKLLLLDKLLCRLKETGHRVL 534
Query: 288 LFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAG 347
+FS M ++LDIL EYLQ R ++R+DG+ E R+ A+ FN+ S F FLLS RA G
Sbjct: 535 IFSQMVRMLDILAEYLQRRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGG 594
Query: 348 RGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
G+NL +ADTVII+D D NP+N+ QA ARAHRIGQK +V +
Sbjct: 595 LGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNI 635
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 157/416 (37%), Positives = 230/416 (55%), Gaps = 64/416 (15%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV---------AALKFNVLVTTYEFIM 51
M W KW P ++CI Y+G + R + E +KFNVL+TTYE+I+
Sbjct: 437 MPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYIL 496
Query: 52 YDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLL 111
DR++L + W+++ +DEA R+K+ ES L L+ ++ R+L+TGTPLQN++KEL +L+
Sbjct: 497 KDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALV 556
Query: 112 NLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRR 171
N L+P F +E N D++ E IH LH+ ++PF+LRR
Sbjct: 557 NFLMPGRF------------TIDQEIDFENQDEEQEE------YIHDLHRRIQPFILRRL 598
Query: 172 VEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKV-- 229
+DVE SLP K +LR +S +Q+ Y K + KN Y A
Sbjct: 599 KKDVEKSLPSKTERILRVELSDVQTEYY----------------KNILTKN--YSALTAG 640
Query: 230 ----YKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF-------------LVKSCGKLWIL 272
+ +L N EL+K NHP L + + F L+ S GK+ +L
Sbjct: 641 AKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLL 700
Query: 273 DRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSH 332
D++L +L++ GHRVL+FS M ++LDIL +YL + + ++R+DGT R +I FNS
Sbjct: 701 DQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSP 760
Query: 333 DSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
DS+ F+FLLS RA G G+NL +ADTV+I+D D NP+ + QA+ARAHRIGQK V V
Sbjct: 761 DSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMV 816
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 270 bits (689), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 238/399 (59%), Gaps = 42/399 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQE-----VAALKFNVLVTTYEFIMYDRS 55
++ WQ E+ W ++ + Y+G + R+ + + E LKFN+L+TTYE ++ D++
Sbjct: 540 LTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKA 599
Query: 56 KLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLL 115
L ++W +I +DEA R+K+ +S+L + L ++ RLL+TGTPLQN LKELWSLL+ ++
Sbjct: 600 FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM 659
Query: 116 PEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDV 175
PE F + W + F++E H ++ LH+ LEPF+LRR +DV
Sbjct: 660 PEKFSS------W--EDFEEE---HGKGREYGYAS--------LHKELEPFLLRRVKKDV 700
Query: 176 EGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNN 235
E SLP KV +LR MSA+Q Y WI T + + K N
Sbjct: 701 EKSLPAKVEQILRMEMSALQKQYYKWI-LTRNYKALSKGSKGSTS-----------GFLN 748
Query: 236 RCMELRKTCNHPLLNYP------YFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVLLF 289
MEL+K CNH L P Y + L++S GKL +LD++LI+L+ G+RVL+F
Sbjct: 749 IMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIF 808
Query: 290 STMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRG 349
S M ++LDIL EYL++RQ ++R+DG+ E R+ A+ FN+ S+ F FLLS RA G G
Sbjct: 809 SQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLG 868
Query: 350 LNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
+NL SADTV+I+D D NP+N+ QA ARAHRIGQK++V +
Sbjct: 869 INLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNI 907
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/417 (37%), Positives = 226/417 (54%), Gaps = 69/417 (16%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA-----------------ALKFNVLVTT 46
W+ E W P CI Y+G KD R+ + E++ KFNVL+T+
Sbjct: 794 WEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLLTS 853
Query: 47 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 106
YE I D + L +DW +++DEA R+K +S R L+ Y +LLLTGTPLQN+L+E
Sbjct: 854 YELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGTPLQNNLEE 913
Query: 107 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 166
L+ LLN L + F++ +AF F+ ++E + RLH++L P
Sbjct: 914 LFHLLNFLSRDKFNDLQAFQGEFADVSKEEQ------------------VKRLHEMLGPH 955
Query: 167 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQ 226
MLRR DV ++P K ++R +SA+Q Y +I + KN Y+
Sbjct: 956 MLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFI----------------LTKN--YE 997
Query: 227 AKVYKTLNNRC------MELRKTCNHPLLNYPYFSDLSK---------DFLVKSCGKLWI 271
A K+ C M+L+K CNHP L +P ++ + + L K+ GKL +
Sbjct: 998 ALNSKSGGGSCSLINIMMDLKKCCNHPYL-FPSAAEEATTAAGGLYEINSLTKAAGKLVL 1056
Query: 272 LDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNS 331
L ++L +L+ HRVL+FS MTK+LDILE++L+ Q Y RIDG + R+ AI FN+
Sbjct: 1057 LSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNA 1116
Query: 332 HDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
+ F+FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHRIGQ +V +
Sbjct: 1117 PGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMI 1173
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/411 (38%), Positives = 228/411 (55%), Gaps = 54/411 (13%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA--------------ALKFNVLVTT 46
++ W+ EL W P + C+ YVG K R+ + E++ KFNV++T+
Sbjct: 328 LTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNVMLTS 387
Query: 47 YEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 106
YEFI D + L +DW +++DEA R++ +S R L +YR +LLLTGTPLQN+L+E
Sbjct: 388 YEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQNNLEE 447
Query: 107 LWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPF 166
L+ LLN L F++ + F F+ ++E + RLH+ILEP
Sbjct: 448 LFHLLNFLSSGKFNDLQTFQAEFTDVSKEEQ------------------VKRLHEILEPH 489
Query: 167 MLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQ 226
MLRR DV S+PPK ++R +S++Q Y I T + + RV
Sbjct: 490 MLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHI-LTKNFKALNQKGGGRVC------ 542
Query: 227 AKVYKTLNNRCMELRKTCNHPLLNYPYFSD---------LSKDFLVKSCGKLWILDRILI 277
+L N M+LRK CNHP L +P ++ L K+ GKL +L ++L
Sbjct: 543 -----SLLNIMMDLRKCCNHPYL-FPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLK 596
Query: 278 KLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCF 337
+L+ HRVLLFS MTK+L++LE +L+ Y RIDG+ + R+ AI FN S+ F
Sbjct: 597 QLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHF 656
Query: 338 IFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
+FLLS RA G G+NL +ADTVII+D D NP N+ QA +RAHR+GQK++V +
Sbjct: 657 VFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMI 707
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 171/450 (38%), Positives = 253/450 (56%), Gaps = 46/450 (10%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKVDWK 63
W+ EL ++ PS+S I Y G K++R+ L + +F+VL+TTYE + D L WK
Sbjct: 99 WRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRFHVLLTTYEMCLKDARYLKSWKWK 158
Query: 64 YIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFDNRK 123
+++DEA R+K++ES+L + L + R+LLTGTP+QN+L+E++SLL + P VF +
Sbjct: 159 ILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTPIQNNLQEVYSLLTFIQPSVF-LPE 217
Query: 124 AFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLPPKV 183
A D+ NA D ++TE ++ LHQ+L+PF+LRR +V LP K
Sbjct: 218 AVEDFV-----------NAYAD-IQTEPA--LVDELHQVLQPFLLRRVKAEVAAELPKKT 263
Query: 184 SIVLRCRMSAIQSAIYDWI--KATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMELR 241
+V+ +SA+Q Y I + R D + R L N M+LR
Sbjct: 264 ELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTR---------------LLNVLMQLR 308
Query: 242 KTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTKL 295
K +HP L F + + LV++ GKL +LD +L LQ GH VLLFS MT++
Sbjct: 309 KCVDHPYL----FDGVEPEPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQMTRM 364
Query: 296 LDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQSA 355
LDIL++YL++R Y R+DG+ E+R AI +F++ D FIFLLS +A G G+NL +A
Sbjct: 365 LDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFST--KDVFIFLLSTKAGGVGMNLTAA 422
Query: 356 DTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYMEA--VVDKISSHQKEDELRSGGTV 413
DTVI D D NP+N+ QA ARAHRIGQ R VKVI + +++I + +LR TV
Sbjct: 423 DTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLTDTV 482
Query: 414 DLEDDLAGKDRYIGSIEGLIRNNIQQYKID 443
E + D+ + GL + I ++ +D
Sbjct: 483 IEEGRFSLLDQAQSAASGLQLSEILKFGVD 512
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 267 bits (682), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 165/402 (41%), Positives = 229/402 (56%), Gaps = 47/402 (11%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRL------FSQEVAALKFNVLVTTYEFIMYDRSKL 57
WQ L W P ++ I Y G + R+ + S LKFN+L+TTYE+I+ D+ +L
Sbjct: 454 WQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEYILKDKQEL 513
Query: 58 SKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPE 117
+ + W+Y+ IDEA R+K+ ES L L ++R RLL+TGTPLQN+LKEL SL+N L+P
Sbjct: 514 NNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVNFLMPG 573
Query: 118 VFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEG 177
F R + F QP NA E E+ I L + L+PF+LRR +DVE
Sbjct: 574 KFYIRDELN--FDQP--------NA-----EQERD---IRDLQERLQPFILRRLKKDVEK 615
Query: 178 SLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRC 237
SLP K +LR +S +Q+ Y I T R R Q +L N
Sbjct: 616 SLPSKSERILRVELSDMQTEWYKNI-LTKNYRALTGHTDGRGQL----------SLLNIV 664
Query: 238 MELRKTCNHPLLNYPYFSD--------LSKDFL---VKSCGKLWILDRILIKLQRTGHRV 286
+EL+K NHP L +P ++ +D L + + GK+ +LD++L +L+ GHRV
Sbjct: 665 VELKKVSNHPYL-FPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHRV 723
Query: 287 LLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAA 346
L+FS M ++L+IL EY+ R Y+R+DGT R +I FN+ DS F+FLLS RA
Sbjct: 724 LIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRAG 783
Query: 347 GRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
G G+NL +ADTVII+D D NP+ + QA+ARAHRIGQK V V
Sbjct: 784 GLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNV 825
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 228/412 (55%), Gaps = 57/412 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRL----FSQEVAAL---------------KFNVLV 44
W+ E W P + Y G K+ RS + FS E A+ KF+VL+
Sbjct: 764 WEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLL 823
Query: 45 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 104
T+YE I D++ L ++W +++DEA R+K+ +S R L+ Y+ +LLLTGTPLQN+L
Sbjct: 824 TSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNL 883
Query: 105 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 164
+EL+ LLN L PE F+N + F + F+ +++ I +LH +L
Sbjct: 884 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQ------------------IKKLHDLLG 925
Query: 165 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPI 224
P MLRR DV ++P K +++R +S +Q Y +I ++ + +V
Sbjct: 926 PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQV----- 980
Query: 225 YQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKD--FLVKSCGKLWILDRIL 276
+L N M+L+K CNHP L P + S D LVKS GKL +L ++L
Sbjct: 981 -------SLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKML 1033
Query: 277 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDC 336
KL+ GHRVL+FS MTK+LD+LE++L++ Y RIDG + R+ AI FN+ +
Sbjct: 1034 KKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQ 1093
Query: 337 FIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
F FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHRIGQ ++V +
Sbjct: 1094 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1145
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 266 bits (680), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 224/413 (54%), Gaps = 59/413 (14%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-------------------AALKFNVLV 44
W+ E W P + Y G KD R+ + E A +KF+VL+
Sbjct: 800 WEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLL 859
Query: 45 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 104
T+YE I D++ L + W +++DEA R+K+ +S R L+ Y+ +LLLTGTPLQN+L
Sbjct: 860 TSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNL 919
Query: 105 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 164
+EL+ LLN L PE F+N + F + F+ +++ I +LH +L
Sbjct: 920 EELFHLLNFLTPERFNNLEGFLEEFADISKEDQ------------------IKKLHDLLG 961
Query: 165 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPI 224
P MLRR DV ++P K +++R +S +Q Y +I L + E R N +
Sbjct: 962 PHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYI-----LTRNFEALNSRGGGNQV 1016
Query: 225 YQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKDF---------LVKSCGKLWILDRI 275
+L N M+L+K CNHP L +P + S L+KS GKL +L ++
Sbjct: 1017 -------SLLNIMMDLKKCCNHPYL-FPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKM 1068
Query: 276 LIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSD 335
L KL+ GHRVL+FS MTK+LD+LE++L + Y RIDG + R+ AI FN+ +
Sbjct: 1069 LRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQ 1128
Query: 336 CFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
F FLLS RA G G+NL +ADTVII+D D NP N+ QA +RAHRIGQ +V +
Sbjct: 1129 QFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMI 1181
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 262 bits (670), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/434 (36%), Positives = 236/434 (54%), Gaps = 60/434 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVA-------------------ALKFNVLV 44
W+ E +W P + YVG +D R L E + +KF+VL+
Sbjct: 666 WEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKFHVLL 725
Query: 45 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 104
T+YE I D++ LS ++W +++DEA R+K+ +S+ ++L+ Y R+LLTGTPLQN+L
Sbjct: 726 TSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPLQNNL 785
Query: 105 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 164
+EL+ LLN L E F+ +AF F++ +++ I +LH +L
Sbjct: 786 EELFHLLNFLSKERFNQLEAFTAEFNEISKEDQ------------------IEKLHNLLG 827
Query: 165 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPI 224
P MLRR DV +P K +++R +SA+Q W K T D + K
Sbjct: 828 PHMLRRLKADVLTGMPSKSELIVRVELSAMQKK---WYKNILTRNFDALNVK-------- 876
Query: 225 YQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSKD--------FLVKSCGKLWILDRIL 276
+L N MEL+K CNHP L + K+ L+K+ GK +L ++L
Sbjct: 877 -NGGTQMSLMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKML 935
Query: 277 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDC 336
KL+ GHRVL+FS MT++LDI+E+ ++ Y RIDG+ + R+ AI +N+ +
Sbjct: 936 RKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQ 995
Query: 337 FIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV---IYMEA 393
FIFLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHR+GQK +V + + ++
Sbjct: 996 FIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKS 1055
Query: 394 VVDKISSHQKEDEL 407
V +KI+S K+ L
Sbjct: 1056 VEEKITSVAKKKML 1069
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 260 bits (665), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 221/395 (55%), Gaps = 40/395 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W+ E+ ++ P +SC+ Y G K++R+RL F+VL+TTYE + D S L
Sbjct: 101 LSNWKEEMERFAPGLSCVTYTGDKEERARLQQDLRQESGFHVLLTTYEICLKDASFLKSF 160
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFD 120
W + +DEA R+K++ S+L R L + RLLLTGTP+QN L+EL+SLL ++ P++F
Sbjct: 161 SWSVLAVDEAHRLKNQSSLLHRTLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLF- 219
Query: 121 NRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP 180
R+ D F Q +Q + EK+ LH++L+PF+LRR V LP
Sbjct: 220 CREQVED-FVQRYQ-------------DIEKESKSASELHRLLQPFLLRRVKAQVATELP 265
Query: 181 PKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMEL 240
K +V+ MSA+Q Y I + E K+ L N +L
Sbjct: 266 KKTEVVVYHGMSALQKKYYKAILMKDLDAFENETAKK-------------VKLQNILTQL 312
Query: 241 RKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTK 294
RK +HP L F + + L+++ GKL +LDR+L L GHRVLLFS MT
Sbjct: 313 RKCVDHPYL----FDGVEPEPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQMTH 368
Query: 295 LLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS 354
+LDIL++Y+ +R Y R+DG+ E+R AI +F + F+FLLS RA G G+NL +
Sbjct: 369 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG--NQPIFVFLLSTRAGGVGMNLTA 426
Query: 355 ADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
ADTVI D D NP+N+ QA ARAHRIGQ + VKVI
Sbjct: 427 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVI 461
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 259 bits (662), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/434 (35%), Positives = 230/434 (52%), Gaps = 60/434 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA-------------------LKFNVLV 44
W+ E W P + YVG ++ R + E + LKF+VL+
Sbjct: 680 WEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLENLKFHVLL 739
Query: 45 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 104
T+YE I D++ LS +DW +++DEA R+K+ +S ++L Y Q R+LLTGTPLQN+L
Sbjct: 740 TSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLTGTPLQNNL 799
Query: 105 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 164
+EL+ LLN L P+ F+ ++F FS+ +++ I +LH +L
Sbjct: 800 EELFHLLNFLAPDRFNQLESFTAEFSEISKEDQ------------------IEKLHNLLG 841
Query: 165 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPI 224
P MLRR DV +P K +++R +SA+Q Y I R +
Sbjct: 842 PHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILT------------RNFDALNV 889
Query: 225 YQAKVYKTLNNRCMELRKTCNHPLLNYPYFSDLSK--------DFLVKSCGKLWILDRIL 276
+L N MEL+K CNHP L + K L+K+ GK +L ++L
Sbjct: 890 KNGGTQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQKML 949
Query: 277 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDC 336
KL+ GHRVL+FS MT +LDILE++ Y RIDG+ + + R+ AI +N+ +
Sbjct: 950 RKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQ 1009
Query: 337 FIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV---IYMEA 393
F+FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHR+GQK +V + + +
Sbjct: 1010 FVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGS 1069
Query: 394 VVDKISSHQKEDEL 407
V ++I+S K+ L
Sbjct: 1070 VEERITSVAKKKML 1083
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 259 bits (661), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 221/395 (55%), Gaps = 40/395 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W+ E+ ++ P +SC+ Y G KD+R+ L +F+VL+TTYE + D S L
Sbjct: 109 LSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLKQESRFHVLLTTYEICLKDASFLKSF 168
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFD 120
W +++DEA R+K++ S+L + L + LLLTGTP+QN L+EL+SLL+ + P++F
Sbjct: 169 PWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFS 228
Query: 121 NRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP 180
+ + F Q +Q + EK+ L+++L+PF+LRR +V LP
Sbjct: 229 KEQV--EDFVQRYQ-------------DIEKESESASELYKLLQPFLLRRVKAEVATELP 273
Query: 181 PKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMEL 240
K +V+ MSA+Q Y I + E K+ L N +L
Sbjct: 274 RKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKK-------------VKLQNVLSQL 320
Query: 241 RKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTK 294
RK +HP L F + D L+++ GKL +LD++L L GHRVLLFS MT+
Sbjct: 321 RKCVDHPYL----FDGVEPEPFEIGDHLIEASGKLHLLDKLLAFLYSKGHRVLLFSQMTQ 376
Query: 295 LLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS 354
+LDIL++YL +R Y R+DG+ E+R AI +F F FLLS RA G G+NL +
Sbjct: 377 MLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIFTFLLSTRAGGVGMNLTA 434
Query: 355 ADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVI 389
ADTVI +D D NP+N+ QA ARAHRIGQ + VKVI
Sbjct: 435 ADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVI 469
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 258 bits (658), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 151/397 (38%), Positives = 220/397 (55%), Gaps = 40/397 (10%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAALKFNVLVTTYEFIMYDRSKLSKV 60
+S W+ E+ ++ P +SC+ Y G K++R+ L +F+VL+TTYE + D S L
Sbjct: 107 LSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLKQESRFHVLLTTYEICLKDASFLKSF 166
Query: 61 DWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEVFD 120
W +++DEA R+K++ S+L + L + LLLTGTP+QN L+EL+SLL+ + P++F
Sbjct: 167 PWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLFS 226
Query: 121 NRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGSLP 180
+ F Q +Q + EK+ LH++L+PF+LRR +V LP
Sbjct: 227 KEEVGD--FIQRYQ-------------DIEKESESASELHKLLQPFLLRRVKAEVATELP 271
Query: 181 PKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCMEL 240
K +V+ MSA+Q Y I + E K+ L N +L
Sbjct: 272 KKTEVVIYHGMSALQKKYYKAILMKDLDAFENETAKK-------------VKLQNILSQL 318
Query: 241 RKTCNHPLLNYPYFSDLS------KDFLVKSCGKLWILDRILIKLQRTGHRVLLFSTMTK 294
RK +HP L F + D L ++ GKL +LD++L L GHRVLLFS MT+
Sbjct: 319 RKCVDHPYL----FDGVEPEPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRVLLFSQMTQ 374
Query: 295 LLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAGRGLNLQS 354
+LDIL++Y+ +R Y R+DG+ E+R AI +F F+FLLS RA G G+NL +
Sbjct: 375 MLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQ--PIFVFLLSTRAGGVGMNLTA 432
Query: 355 ADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 391
ADTVI D D NP+N+ QA ARAHRIGQ + VKVI +
Sbjct: 433 ADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRL 469
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 252/493 (51%), Gaps = 90/493 (18%)
Query: 1 MSMWQSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQEVAALKFNVLVTTY 47
++ W+ E + W + +Y+ + KD R RL A KF+ L+TT+
Sbjct: 873 ITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP---GAYKFDALITTF 929
Query: 48 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 107
E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++EL
Sbjct: 930 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 989
Query: 108 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 167
+SLL+ L P F + F F L+TE++V +L IL+P M
Sbjct: 990 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPMM 1031
Query: 168 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 227
LRR EDVE +L PK ++ ++ IQ Y I ++KN + +
Sbjct: 1032 LRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLS 1075
Query: 228 KVYKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCG 267
K N N MELRK CNHP L + D +V+S G
Sbjct: 1076 KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAG 1135
Query: 268 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 327
KL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1136 KLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1195
Query: 328 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 387
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1196 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1255
Query: 388 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQYK 441
V + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1256 VYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQFS 1301
Query: 442 IDMADEVINAGRF 454
++++ G +
Sbjct: 1302 KKEIEDLLRKGAY 1314
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 253/493 (51%), Gaps = 90/493 (18%)
Query: 1 MSMWQSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQEVAALKFNVLVTTY 47
++ W+ E + W + +Y+ + KD R RL A KF+ L+TT+
Sbjct: 871 ITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP---GAYKFDALITTF 927
Query: 48 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 107
E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++EL
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 108 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 167
+SLL+ L P F + F F L+TE++V +L IL+P M
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPMM 1029
Query: 168 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 227
LRR EDVE +L PK ++ ++ IQ Y I ++KN + +
Sbjct: 1030 LRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLS 1073
Query: 228 KVYKTLN-----NRCMELRKTCNHPLLNYPYFSDLSKDF---------------LVKSCG 267
K N N MELRK CNHP L + +F +V+S G
Sbjct: 1074 KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAG 1133
Query: 268 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 327
KL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1134 KLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1193
Query: 328 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 387
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1194 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1253
Query: 388 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQYK 441
V + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1254 VYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQFS 1299
Query: 442 IDMADEVINAGRF 454
++++ G +
Sbjct: 1300 KKEIEDLLRKGAY 1312
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 256 bits (655), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 170/493 (34%), Positives = 252/493 (51%), Gaps = 90/493 (18%)
Query: 1 MSMWQSELHKWLPSVSCIYY-------------VGAKDQRSRLFSQEVAALKFNVLVTTY 47
++ W+ E + W + +Y+ + KD R RL A KF+ L+TT+
Sbjct: 871 ITNWEREFNTWTEMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIP---GAYKFDALITTF 927
Query: 48 EFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKEL 107
E I+ D +L +++W+ +IIDEA R+K+R L L + ++LLTGTPLQN ++EL
Sbjct: 928 EMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 108 WSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFM 167
+SLL+ L P F + F F L+TE++V +L IL+P M
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDFGD---------------LKTEEQV---QKLQAILKPMM 1029
Query: 168 LRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQA 227
LRR EDVE +L PK ++ ++ IQ Y I ++KN + +
Sbjct: 1030 LRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLS 1073
Query: 228 KVYKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCG 267
K N N MELRK CNHP L + D +V+S G
Sbjct: 1074 KGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAG 1133
Query: 268 KLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIV 327
KL ++D++L KL+ GH+VL+FS M + LDILE+YL R+ +Y RIDG R++AI
Sbjct: 1134 KLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAID 1193
Query: 328 DFNSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVK 387
F+ DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VK
Sbjct: 1194 RFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVK 1253
Query: 388 VIYMEAVVDKISSHQKEDELRSGGTVDLEDD------LAGKDRYIGSIEGLIRNNIQQYK 441
V + I+ + E E+ ++ L D ++G+D G+I G IQQ+
Sbjct: 1254 VYRL------ITRNSYEREMFDKASLKLGLDKAVLQSMSGRD---GNITG-----IQQFS 1299
Query: 442 IDMADEVINAGRF 454
++++ G +
Sbjct: 1300 KKEIEDLLRKGAY 1312
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 256 bits (654), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 223/402 (55%), Gaps = 46/402 (11%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEVAA-----LKFNVLVTTYEFIMYDRSKLS 58
WQ L W ++CI Y+G R + E +KFN+L+TTYE+++ DRS LS
Sbjct: 439 WQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNLLLTTYEYVLKDRSVLS 498
Query: 59 KVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPEV 118
+ W+Y+ IDEA R+K+ ES L L +++ RLL+TGTPLQN+++EL +L++ L+P
Sbjct: 499 NIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVDFLMPGK 558
Query: 119 FDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVEGS 178
F+ R + E P E++ I L + L+P++LRR +DVE S
Sbjct: 559 FEIR--------EEINLEAPD----------EEQEAYIRSLQEHLQPYILRRLKKDVEKS 600
Query: 179 LPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNRCM 238
LP K +LR +S +Q Y I T RV + +L N +
Sbjct: 601 LPSKSERILRVELSDLQMYWYKNI-LTRNYRV----------LTQSISSGSQISLLNIVV 649
Query: 239 ELRKTCNHPLL------------NYPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRV 286
EL+K NHP L N D L+ + GK+ +LD++L +L+R GHRV
Sbjct: 650 ELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGHRV 709
Query: 287 LLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAA 346
L+FS M ++LDIL +YL R ++R+DGT R ++I FN+ +S F+FLLS RA
Sbjct: 710 LIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTRAG 769
Query: 347 GRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
G G+NL +ADTVII+D D NP+ + QA+ARAHRIGQK V V
Sbjct: 770 GLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMV 811
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/419 (36%), Positives = 219/419 (52%), Gaps = 66/419 (15%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-----------AALKFNVLVTTYEF 49
++ W+ E W ++ I Y G++ R + E+ KF+V++TT+E
Sbjct: 521 ITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEM 579
Query: 50 IMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWS 109
I+ D +L K+ W +IIDEA R+K+R L L + ++LLTGTPLQN ++EL+S
Sbjct: 580 ILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFS 639
Query: 110 LLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLR 169
LLN L P F + AF + F L+TE++V +L IL+P MLR
Sbjct: 640 LLNFLEPSQFPSETAFLEEFGD---------------LKTEEQV---KKLQSILKPMMLR 681
Query: 170 RRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKV 229
R +DVE +L PK ++ ++ IQ Y I ++KN + K
Sbjct: 682 RLKDDVEKNLAPKQETIIEVELTNIQKKYYRAI----------------LEKNFSFLTKG 725
Query: 230 YKTLN-----NRCMELRKTCNHPLL---------------NYPYFSDLSKDFLVKSCGKL 269
N N MELRK CNHP L + P D ++++ GKL
Sbjct: 726 ANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKL 785
Query: 270 WILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDF 329
++D++L KL GH+VL+FS M + LDILE+YL R+ Y RIDG R++AI F
Sbjct: 786 VLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRF 845
Query: 330 NSHDSDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
DSD F+FLL RA G G+NL +ADT II+D D NP+N+ QA AR HRIGQ + VKV
Sbjct: 846 CKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKV 904
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/401 (38%), Positives = 226/401 (56%), Gaps = 30/401 (7%)
Query: 1 MSMWQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV---AALKFNVLVTTYEFIMYDRSK- 56
+S W +E+ ++ PS++ I Y G K+QR L + + KF +++T+YE M D +
Sbjct: 262 LSNWFNEIARFTPSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRI 321
Query: 57 LSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKELWSLLNLLLP 116
L WKY++IDE R+K+ + L R+L + +LLLTGTPLQN+L ELWSLLN +LP
Sbjct: 322 LRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILP 381
Query: 117 EVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILEPFMLRRRVEDVE 176
++F + F WF F ++ ++ E +++ ++ +LH IL PF+LRR DVE
Sbjct: 382 DIFTSHDEFESWFD--FSEKNKNEATKEE--EEKRRAQVVSKLHGILRPFILRRMKCDVE 437
Query: 177 GSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPIYQAKVYKTLNNR 236
SLP K I++ M+ Q + + TL + +N I LNN
Sbjct: 438 LSLPRKKEIIMYATMTDHQKKFQEHL-VNNTLEA-------HLGENAIRGQGWKGKLNNL 489
Query: 237 CMELRKTCNHP-LLN--------YPYFSDLSKDFLVKSCGKLWILDRILIKLQRTGHRVL 287
++LRK CNHP LL YP ++ V CGK +L+R+L++L H+VL
Sbjct: 490 VIQLRKNCNHPDLLQGQIDGSYLYPPVEEI-----VGQCGKFRLLERLLVRLFANNHKVL 544
Query: 288 LFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDCFIFLLSIRAAG 347
+FS TKLLDI++ Y + RIDG+ L++R I DF+ S C IFLLS RA G
Sbjct: 545 IFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGG 604
Query: 348 RGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
G+NL +ADT I+YD D NP+ + QA+ R HRIGQ + V V
Sbjct: 605 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV 645
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 253 bits (646), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 225/412 (54%), Gaps = 57/412 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-------------------AALKFNVLV 44
W+ E W P + + YVG KD R+ + E A++KF+VL+
Sbjct: 790 WEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLL 849
Query: 45 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 104
T+YE I D + L +DW +I+DEA R+K+ +S R L+ Y Q +LLLTGTPLQN+L
Sbjct: 850 TSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNL 909
Query: 105 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 164
+EL+ LLN L PE F N + F + F+ +++ I +LH +L
Sbjct: 910 EELFHLLNFLTPERFHNLEGFLEEFADIAKEDQ------------------IKKLHDMLG 951
Query: 165 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPI 224
P MLRR DV ++P K +++R +S +Q Y +I L + E R N +
Sbjct: 952 PHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYI-----LTRNFEALNARGGGNQV 1006
Query: 225 YQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKD--FLVKSCGKLWILDRIL 276
+L N M+L+K CNHP L P + D L+++ GKL +L ++L
Sbjct: 1007 -------SLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKML 1059
Query: 277 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDC 336
L+ GHRVL+FS MTK+LD+LE++L+ Y RIDG + R+ AI FN+ +
Sbjct: 1060 KNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQ 1119
Query: 337 FIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
F FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHRIGQ ++V +
Sbjct: 1120 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1171
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 253 bits (645), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 225/412 (54%), Gaps = 57/412 (13%)
Query: 4 WQSELHKWLPSVSCIYYVGAKDQRSRLFSQEV-------------------AALKFNVLV 44
W+ E W P + + YVG KD R+ + E A++KF+VL+
Sbjct: 783 WEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHVLL 842
Query: 45 TTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDL 104
T+YE I D + L +DW +I+DEA R+K+ +S R L+ Y Q +LLLTGTPLQN+L
Sbjct: 843 TSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQNNL 902
Query: 105 KELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNADDDWLETEKKVIIIHRLHQILE 164
+EL+ LLN L PE F N + F + F+ +++ I +LH +L
Sbjct: 903 EELFHLLNFLTPERFHNLEGFLEEFADIAKEDQ------------------IKKLHDMLG 944
Query: 165 PFMLRRRVEDVEGSLPPKVSIVLRCRMSAIQSAIYDWIKATGTLRVDPEDEKRRVQKNPI 224
P MLRR DV ++P K +++R +S +Q Y +I L + E R N +
Sbjct: 945 PHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYI-----LTRNFEALNARGGGNQV 999
Query: 225 YQAKVYKTLNNRCMELRKTCNHPLL------NYPYFSDLSKD--FLVKSCGKLWILDRIL 276
+L N M+L+K CNHP L P + D L+++ GKL +L ++L
Sbjct: 1000 -------SLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKML 1052
Query: 277 IKLQRTGHRVLLFSTMTKLLDILEEYLQWRQLVYRRIDGTTSLEDRESAIVDFNSHDSDC 336
L+ GHRVL+FS MTK+LD+LE++L+ Y RIDG + R+ AI FN+ +
Sbjct: 1053 KNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQ 1112
Query: 337 FIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQKREVKV 388
F FLLS RA G G+NL +ADTVIIYD D NP N+ QA +RAHRIGQ ++V +
Sbjct: 1113 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMI 1164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,269,161
Number of Sequences: 539616
Number of extensions: 20843156
Number of successful extensions: 53041
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 440
Number of HSP's that attempted gapping in prelim test: 50778
Number of HSP's gapped (non-prelim): 1866
length of query: 1179
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1050
effective length of database: 121,958,995
effective search space: 128056944750
effective search space used: 128056944750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)