BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001044
(1177 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SXL4|AHK1_ARATH Histidine kinase 1 OS=Arabidopsis thaliana GN=AHK1 PE=1 SV=2
Length = 1207
Score = 1394 bits (3607), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 715/1207 (59%), Positives = 895/1207 (74%), Gaps = 79/1207 (6%)
Query: 5 LTLKRVFESICISSGIAGSWRSR-RAPRSRRMIQKDAADQQQGDEFQHAAARCLSSYYSV 63
+ +++VF+ + + WRS +PR +++ D + DEFQ+A++ CLSSYYSV
Sbjct: 25 MQIRKVFDKM---TEWVTPWRSNLESPREMMILRGDV----EQDEFQYASSHCLSSYYSV 77
Query: 64 FVARLAIMIMLAILIGLLTVLTWHFTRVYTTKSLDTLAYGLRYELLQRPLLRMWNIVNST 123
FV RLAIM+MLAILIGLLTVLTWHFTR+YT +SL TLAYGLRYELLQRP+LRMW+++N+T
Sbjct: 78 FVVRLAIMVMLAILIGLLTVLTWHFTRIYTKQSLQTLAYGLRYELLQRPVLRMWSVLNTT 137
Query: 124 AEITAAQVKLSEYVIKRYNKPATQAEQIQLYEVMRDVTWAMFASRKALNAITINYKNGFV 183
+E+T AQVKLSEYVIK+Y+KP TQ E +++Y+ M+DVTWA+FAS KALNAITINY+NGFV
Sbjct: 138 SELTTAQVKLSEYVIKKYDKPTTQEELVEMYQAMKDVTWALFASAKALNAITINYRNGFV 197
Query: 184 QAFHRDHRSNNTFYIYSDLSNYSIGTSGPYDSNLISSREGWNDQSIKGNISAIWYREPLD 243
QAFHRD S++TFYI+SDL NYSI +GP D + GWN++SI GN+SAIWY++ LD
Sbjct: 198 QAFHRDPASSSTFYIFSDLKNYSISGTGPEDVS------GWNNKSIHGNMSAIWYQQQLD 251
Query: 244 PITGEKIGKASPIPPDDLINIAGISQVPDGVASWHVAVSKFTNSPLLSAALPVWDPTTSN 303
P+TGE +GK IPPDDLINIAGISQVPDG ASWHV VSK+ +SPLLSAALPV+D SN
Sbjct: 252 PVTGENLGKPLKIPPDDLINIAGISQVPDGEASWHVTVSKYMDSPLLSAALPVFD--ASN 309
Query: 304 KSIVAVVGVTTALSSVGQLMKELVEVHSGHIYLTSQEGYLLATSTNAPLLTNSSTGPNLV 363
KSIVAVVGVTTAL SVGQLM++LVEVH GHIYLTSQEGYLLATST+ PLL N+S GP L+
Sbjct: 310 KSIVAVVGVTTALYSVGQLMRDLVEVHGGHIYLTSQEGYLLATSTDGPLLKNTSNGPQLM 369
Query: 364 KAVDSDNPVIQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQYYMDTFFLNLKRLPIVGV 423
KA DS+ VI+ GAQWL+ YGSK P HV+H +N KLG ++YY+D+F+LNLKRLPIVGV
Sbjct: 370 KATDSEEWVIKSGAQWLEKTYGSKRP--HVVHAENVKLGDQRYYIDSFYLNLKRLPIVGV 427
Query: 424 IIIPREYIMGKADERAYKTLIILISASVCILVIGCICILILTNGVSKEMKLRAELISHLD 483
+IIPR++IMGK DERA+KTLIILISASVCI IGC+CILILTNGVSKEMKLRAELI LD
Sbjct: 428 VIIPRKFIMGKVDERAFKTLIILISASVCIFFIGCVCILILTNGVSKEMKLRAELIRQLD 487
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AEAS+NYKSQFLANMSHELRTPMAA+IGLL+IL SDD L+NEQY+TV QI+K S A
Sbjct: 488 ARRRAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTA 547
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
LLRLLN ILDLSKVESGK+ LE EFDL +ELE LVDMFSVQC NHNVETVLDLSD++P
Sbjct: 548 LLRLLNNILDLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPA 607
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
VRGD R+ QIF+NLI+NSIKFT++GHII+RGWCEN+++ + DR+K +T
Sbjct: 608 LVRGDSARLVQIFANLISNSIKFTTTGHIILRGWCENINSLHDEMSVSVDRRKPWAPMKT 667
Query: 664 KLKQQANNAM-NFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 722
K Q N+ + + NK+ L FEVDDTGCGID SKW++VFESFEQ DPSTTR HGGTGL
Sbjct: 668 KQVQHRNHLQKSCKNANKMVLWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRTHGGTGL 727
Query: 723 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFP--NTVVVLATV 780
GL IVR LVNKMGGEIKVV+KN GTLM+LYL+L Q DF VV+L+
Sbjct: 728 GLCIVRNLVNKMGGEIKVVQKNGLGTLMRLYLILSTPDTVDQNIQPDFSKYGLVVMLSMY 787
Query: 781 GSMERMIISQWLRKKKVSTLETSEWHGLTQILRELLDPISPVSSNGFDAPYSSREPLKAE 840
GS RMI S+WLRK ++T+E S+W+ LTQI+R+LL+ S N FD+ ++ +PL+AE
Sbjct: 788 GSTARMITSKWLRKHGIATVEASDWNELTQIIRDLLETGS--RDNSFDSQHNISDPLRAE 845
Query: 841 MTNIKALIDPVYVVVIDIALLDLSSDLWREQLNSLDIFHRKAMFAWVVNHQTTSPIKTEL 900
++NI + +PV+V+V+DI +LDL++++W+EQLN LD F KA FAW++ H T++ +KTEL
Sbjct: 846 LSNIVEIKNPVFVIVVDIGVLDLTTNIWKEQLNYLDRFSNKAKFAWLLKHDTSNTVKTEL 905
Query: 901 SREGQNIVVTKPLYKGKMIQLLETAVRGKILGMQNRISSTTNEGNGEEIRGSIANYSASK 960
R+G ++V KPLYK KMIQ+LE ++ + G+ N + N GNG + +
Sbjct: 906 RRKGHVMMVNKPLYKAKMIQILEAVIKNRKRGLCNDLR---NRGNGSDESHDCLEIDPT- 961
Query: 961 HQKFRKCSFEFSSICPGE---SSSRREDLIHTMFRERHQI-GSSRRDQPCSSSNSSSN-- 1014
+F CS + SS GE S + +H+ + + I ++ D S+S + N
Sbjct: 962 --QFDTCSSDDSSETSGEKQVDKSVKPSTLHSPVLKNYLIDATTSNDDSTSASMTQKNPE 1019
Query: 1015 -----------------QKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQA 1057
++ LEG+RILLAEDTP++Q VA +LEK+GATV+ V DG QA
Sbjct: 1020 EEDWKDRLYSGIALDGKNQKSLEGIRILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQA 1079
Query: 1058 VEALN-RMLAAE-----------------SSRRRSLLQGSPSETPDTPRFDLILMDCQMP 1099
V++LN + + A+ ++R SL SP +DLILMDCQMP
Sbjct: 1080 VDSLNYKSINAQAPTEEHKSFEEETANKVTTRETSLRNSSP--------YDLILMDCQMP 1131
Query: 1100 KMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVS 1159
KMDGYEAT IR++E +IPIVALTAHAM++DE KCL VGM+AYLTKPID + MVS
Sbjct: 1132 KMDGYEATKAIRRAEI-GTELHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRKLMVS 1190
Query: 1160 TILRLTK 1166
TIL LTK
Sbjct: 1191 TILSLTK 1197
>sp|O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1
Length = 1122
Score = 192 bits (489), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 273/549 (49%), Gaps = 63/549 (11%)
Query: 237 WYREPLDPITGEKIGKASPIPPDDLINIAGISQVPDGVASW-HVAVSKFTNSPLLSAALP 295
WY + +D +TG G ++ D+ + W A S + + +L
Sbjct: 155 WYTQTVDQLTGRLNGNSTKSQSLDVTH-----------TDWFQAAQSNNYTTAFVGTSLG 203
Query: 296 VWDPTTSNKSIVAVVGVTTALSSVGQLMKELVEV------HSGHIYLTSQEGYLL---AT 346
D T +S+V++ L S+G +K L EV H +Y+ +++G +L +
Sbjct: 204 GEDNETLIQSVVSLYS-KKGLVSLGFPVKTLTEVLNSLNLHGEELYMWTKDGTVLVREGS 262
Query: 347 STNAPLLTNSSTGPNLVKAVDSDNPVIQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQY 406
++ ++N S + +S+ + W Q + G+ + ++ + Y
Sbjct: 263 LNDSFFISNGS----ICFGRESN-------SLWSQCIPENCSSSGYEVEIKRLR-----Y 306
Query: 407 YMDTFFLNLKRLPIVGVIIIPRE----YIMGKADERAYKTLIILISASVCILVIG--CIC 460
+ + +P+ ++ P + I +A++ Y+ ++++I L G
Sbjct: 307 QAFCSVIEVSGVPLRYTLMFPNKGGATRIKHQAEKAKYQLIVVMI-----FLGFGWPVWF 361
Query: 461 ILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEIL 520
+ + +EM +RA LI+ ++A ++AE + KSQ AN SH++R +A + GL++I
Sbjct: 362 VWFMMQATRREMHMRATLINQMEATQQAERKSMNKSQAFANASHDIRGALAGMKGLIDIC 421
Query: 521 KSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 580
+ + ++ +T+ Q+ + L+ LLN +LD+SK+ESGKM+L +F+L K LE+++D
Sbjct: 422 RDGVKPGSDVDTTLNQVNVCAKDLVALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVID 481
Query: 581 MFSVQCSNHNVETVLDLSDNIP---RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGW 637
+ V+ VLD D NVRGD GR+ QI +NL++N++KFT GHI +R W
Sbjct: 482 FYHPVAMKKGVDVVLDPHDGSVFKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAW 541
Query: 638 CENLDTSKNT--AEFPTDRKKFGRAFRTKLKQQANN-----AMNFRED-NKLALCFEVDD 689
+ ++ + A +P KF ++ K K++++ + + R + N + FEVDD
Sbjct: 542 AQRPGSNSSVVLASYPKGVSKFVKSMFCKNKEESSTYETEISNSIRNNANTMEFVFEVDD 601
Query: 690 TGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKK--NSPG 747
TG GI ++VFE++ Q T + H GTGLGL IV++LV MGGEI++ K G
Sbjct: 602 TGKGIPMEMRKSVFENYVQVR-ETAQGHQGTGLGLGIVQSLVRLMGGEIRITDKAMGEKG 660
Query: 748 TLMQLYLLL 756
T Q +LL
Sbjct: 661 TCFQFNVLL 669
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 15/176 (8%)
Query: 979 SSSRREDLIHTMFRERHQIGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVAC 1038
+ S E + ++ R IG+ +Q S + L G R+L+ +D + + VA
Sbjct: 947 TDSESETRVKSVRTGRKPIGNPEDEQ----ETSKPSDDEFLRGKRVLVVDDNFISRKVAT 1002
Query: 1039 KILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQM 1098
L+K+G VS V EAL R++ ++R QGS + P FD I MDCQM
Sbjct: 1003 GKLKKMG--VSEVEQCDSGKEAL-RLVTEGLTQREE--QGSVDKLP----FDYIFMDCQM 1053
Query: 1099 PKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADE-KKCLGVGMNAYLTKPID 1153
P+MDGYEAT EIRK E +G R PI+A++ H ++E ++ + GM+A+L K ++
Sbjct: 1054 PEMDGYEATREIRKVEKSYGVRT-PIIAVSGHDPGSEEARETIQAGMDAFLDKSLN 1108
>sp|Q9C5U1|AHK3_ARATH Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1
Length = 1036
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 169/310 (54%), Gaps = 21/310 (6%)
Query: 444 IILISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMS 503
++ + S ILVI + I+ VS+ K+ + ++KAEA++ KSQFLA +S
Sbjct: 400 VLSMVTSFGILVIALLVAHIIHATVSRIHKVEEDCDKMKQLKKKAEAADVAKSQFLATVS 459
Query: 504 HELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKME 563
HE+RTPM ++G+L +L D +L Q V + S AL+ L+N +LD +K+ESGK+E
Sbjct: 460 HEIRTPMNGVLGMLHMLM-DTELDVTQQDYVRTAQASGKALVSLINEVLDQAKIESGKLE 518
Query: 564 LENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNS 623
LE FDL+ L++++ +FS + VE + +SD +P + GDPGR QI +NL+ NS
Sbjct: 519 LEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILTNLMGNS 578
Query: 624 IKFTSSGHI-----IIRGWCENLDTSKNTAEFP---------TDRKKFGRAFRTKLKQQA 669
IKFT GHI ++ E++D TA P DR++ F+ +
Sbjct: 579 IKFTEKGHIFVTVHLVDELFESIDG--ETASSPESTLSGLPVADRQRSWENFKAF---SS 633
Query: 670 NNAMNFRED-NKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVR 728
N +F + L V+DTG GI +F F Q PS +R HGGTG+GLSI +
Sbjct: 634 NGHRSFEPSPPDINLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSISK 693
Query: 729 TLVNKMGGEI 738
LV M GEI
Sbjct: 694 CLVGLMKGEI 703
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 40/192 (20%)
Query: 997 IGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQ 1056
+G R+ P + + +L G +IL+ +D + VA L+K GA V G++
Sbjct: 865 LGIGIREPPQHKGPPALILRNLLLGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIK 924
Query: 1057 AVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESE 1116
A+ SLL+ P E FD MD QMP+MDG+EAT IR E E
Sbjct: 925 AI---------------SLLK-PPHE------FDACFMDIQMPEMDGFEATRRIRDMEEE 962
Query: 1117 HGAR-----------------NIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVS 1159
R ++P++A+TA + A ++CL GM+ Y++KP ++E++
Sbjct: 963 MNKRIKNGEALIVENGNKTSWHLPVLAMTADVIQATHEECLKCGMDGYVSKPFEAEQLYR 1022
Query: 1160 TILRLTKNMPSE 1171
+ R N PS+
Sbjct: 1023 EVSRFF-NSPSD 1033
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 173 bits (438), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 156/283 (55%), Gaps = 40/283 (14%)
Query: 470 KEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNE 529
KE L+ L A+ AEA++ KS F+ANMSHE+RTPM IIG+ + L D +LT E
Sbjct: 1327 KETTLKNTL-----AKETAEAASRAKSDFMANMSHEIRTPMNGIIGMTD-LTLDTELTAE 1380
Query: 530 QYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNH 589
Q + ++ S+ +LL ++N ILD SK+E+G++EL+ EF L+ L + + S +
Sbjct: 1381 QREYLSMVQSSAGSLLTIINDILDFSKIEAGRLELDQAEFSLRAHLYDALKTLSWRAHQK 1440
Query: 590 NVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAE 649
+E V D++ ++P ++ GDPGR+ QI +NL+ N+IKFTS G +
Sbjct: 1441 CIELVCDIASDVPDSLIGDPGRLRQIVNNLVGNAIKFTSQGEV----------------- 1483
Query: 650 FPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQG 709
L + +++ E + L F V DTG GI + K +FE+F Q
Sbjct: 1484 --------------DLVVKVEKSLSCGE---VVLKFSVIDTGIGIPKDKLHLIFEAFSQA 1526
Query: 710 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQL 752
D S TR++GGTGLGL+I LV M G++ VV K+ G+ +
Sbjct: 1527 DGSITRRYGGTGLGLTISTRLVELMKGKLSVVSKSGKGSTFEF 1569
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 24/138 (17%)
Query: 1024 ILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSET 1083
ILLAED + Q +A ++LEK G V + +GLQAV SS+ R
Sbjct: 1731 ILLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAVA---------SSQLR---------- 1771
Query: 1084 PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVG 1143
+FDLILMD QMP G+EAT +IRK E E G PI+A+TAHA+ D KCL G
Sbjct: 1772 ----KFDLILMDVQMPHCGGFEATAQIRKREHEQGIHT-PIIAMTAHALARDRVKCLEAG 1826
Query: 1144 MNAYLTKPIDSERMVSTI 1161
M+ Y++KPI+ +++ + I
Sbjct: 1827 MDDYISKPINPDQLKAMI 1844
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 172 bits (435), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 173/308 (56%), Gaps = 44/308 (14%)
Query: 467 GVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQL 526
G ++M R ++ + + AE +N KS F+A +SHE+RTP++ +IG+ ++L + L
Sbjct: 1359 GTLRDMTSRKDMQRLILEKEAAEEANKAKSAFVATVSHEVRTPLSGVIGVSDLLL-ETNL 1417
Query: 527 TNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQC 586
+ EQ V I+KSS ALL ++N ILD SK+ES ++++E F + + + ++ M SV
Sbjct: 1418 SEEQRDYVQTIQKSSQALLTIINDILDYSKLESRQLKMETLPFSIIETCQAVIHMLSV-A 1476
Query: 587 SNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKN 646
+N +V+ +L + N+PR + GD R+ Q+ NL++N+IKFTS GH++ D S +
Sbjct: 1477 ANDDVDILLRVPPNVPRIIFGDAMRMRQVLLNLLSNAIKFTSRGHVLT-------DISVD 1529
Query: 647 TAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESF 706
+ PT+ E+ + LC ++DTG GI QS ++++FE F
Sbjct: 1530 DSIPPTN----------------------TEEEIIHLCITIEDTGIGIPQSLFDSIFEPF 1567
Query: 707 EQGDPSTTRKHGGTGLGLSIVRTLVNK-MGGEIKVVKKNSPGTLMQLYLLLGASSESKQI 765
Q D STTRK+GGTGLGLSI + L+ + MGG I+V ++G S+ K I
Sbjct: 1568 SQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQVSS------------IVGQGSKFKCI 1615
Query: 766 YDADFPNT 773
PNT
Sbjct: 1616 IPFLLPNT 1623
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 22/130 (16%)
Query: 1023 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1082
+ L+ ED L + V ++ +K+ T+S +G +A++ E + R
Sbjct: 2026 KALIVEDNELNRKVLAQLFKKIDWTISFAENGREALK--------EITGERC-------- 2069
Query: 1083 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGV 1142
FD++ MDCQMP +DG++ T IR E E+ + + IVAL+A + ++ + CL
Sbjct: 2070 ------FDIVFMDCQMPVLDGFQTTKIIRSKERENNWKRMNIVALSAGSSSSFVQDCLDS 2123
Query: 1143 GMNAYLTKPI 1152
GM++++ KPI
Sbjct: 2124 GMDSFMGKPI 2133
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 184/364 (50%), Gaps = 32/364 (8%)
Query: 453 ILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAA 512
IG + IL +K+ + + + +AEA++ KSQFLA +SHE+RTPM
Sbjct: 431 FFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNG 490
Query: 513 IIGLLEILKSDDQLTNEQ--YSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFD 570
I+G+L +L D +L++ Q Y+ Q+ AL+ L+N +LD +K+E+GK+ELE+ FD
Sbjct: 491 ILGMLAMLL-DTELSSTQRDYAQTAQV--CGKALIALINEVLDRAKIEAGKLELESVPFD 547
Query: 571 LQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSG 630
++ L++++ +FS + N ++E + +SD +P V+GD GR QI NL+ NS+KFT G
Sbjct: 548 IRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVKFTEKG 607
Query: 631 HIIIR-------------------GWCENLDTSKNTAEFPT-------DRKKFGRAFRTK 664
HI ++ G E + + + T D + +F+
Sbjct: 608 HIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAADGRNSWDSFK-H 666
Query: 665 LKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGL 724
L + + F + + L ++DTG GI VF F Q D ST+R +GGTG+GL
Sbjct: 667 LVSEEQSLSEFDISSNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGL 726
Query: 725 SIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFPNTVVVLATVGSME 784
SI + LV M G+I + + G+ +L + I PN + +T M+
Sbjct: 727 SISKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMK 786
Query: 785 RMII 788
+++
Sbjct: 787 AIVV 790
Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 29/192 (15%)
Query: 983 REDLIHTMFRERHQIGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILE 1042
R +I ++ ++ +R+ P SS ++ K +L G +IL+ +D + + VA L+
Sbjct: 908 RASMIGACLQQVLELRKTRQQHPEGSSPAT--LKSLLTGKKILVVDDNIVNRRVAAGALK 965
Query: 1043 KVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMD 1102
K GA V G A+ LLQ P T FD MD QMP+MD
Sbjct: 966 KFGAEVVCAESGQVAL---------------GLLQ-----IPHT--FDACFMDIQMPQMD 1003
Query: 1103 GYEATIEIRKSESEHGAR-----NIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERM 1157
G+EAT +IR E E + ++PI+A+TA ++A ++CL GM+ Y++KP + E +
Sbjct: 1004 GFEATRQIRMMEKETKEKTNLEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENL 1063
Query: 1158 VSTILRLTKNMP 1169
++ + K P
Sbjct: 1064 YKSVAKSFKPNP 1075
>sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase mak2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak2 PE=3 SV=1
Length = 2310
Score = 162 bits (411), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 149/259 (57%), Gaps = 33/259 (12%)
Query: 483 DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSY 542
+AR A + N K+ FLANMSHELRTP ++ G+L +L SD +L EQY V K+S
Sbjct: 1742 EAREAAMHAVNLKTNFLANMSHELRTPFSSFYGMLSLL-SDTKLNEEQYDIVSTAKQSCT 1800
Query: 543 ALLRLLNRILDLSKVESGKMELE-NTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNI 601
+L+++++ +L+ S+++SGKM+LE + FD+++ + + +++ S+ V+ D+ N+
Sbjct: 1801 SLVQIIDDLLNFSELKSGKMKLEPDKVFDVEENIADCIELVYPSLSSKPVQISYDIYPNV 1860
Query: 602 PRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAF 661
P + GD ++ Q+ +NL+ NS+KFT+ GHI++R C +D N
Sbjct: 1861 PALLAGDSAKLRQVITNLLGNSVKFTTEGHILLR--CMAIDEEINA-------------- 1904
Query: 662 RTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTG 721
E+N+ L FE++DTG G+ + + + +F F Q D STTR +GG+G
Sbjct: 1905 ---------------EENQCKLRFEIEDTGIGLKEEQLKLLFNPFTQVDGSTTRIYGGSG 1949
Query: 722 LGLSIVRTLVNKMGGEIKV 740
LGLSI + M G+I V
Sbjct: 1950 LGLSICLQICKIMDGDIGV 1968
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 1012 SSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSR 1071
SS +K IL+ L+AED + + + K L +G V DG++ V+
Sbjct: 2169 SSEEKEILQKKYALIAEDNLIARKLLTKQLSNLGFQVHAAVDGVELVKMY---------- 2218
Query: 1072 RRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARN-IPIVALTAH 1130
E + +I D MP DG EA ++IR E E+ IP++ALTA
Sbjct: 2219 ----------EAKQFGFYSVIFADYHMPIRDGAEAVMDIRAYERENNCSTPIPVIALTAD 2268
Query: 1131 AMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1161
+ +++CL VGMN YLTKP +++V+ +
Sbjct: 2269 IQKSAKQRCLEVGMNFYLTKPFTQKQLVNAV 2299
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase BarA OS=Escherichia
coli (strain K12) GN=barA PE=1 SV=1
Length = 918
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 144/256 (56%), Gaps = 38/256 (14%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 542
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 543 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 602
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 603 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 662
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 663 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 722
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 723 GLSIVRTLVNKMGGEI 738
GL I + LVN+MGG+I
Sbjct: 485 GLVITQKLVNEMGGDI 500
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
FDLILMD QMP MDG A I + + + P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---QQTPVIAVTAHAMAGQKEKLL 760
Query: 1141 GVGMNAYLTKPIDSERMVSTILR 1163
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=barA
PE=1 SV=1
Length = 918
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 144/256 (56%), Gaps = 38/256 (14%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 542
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 543 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 602
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 603 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 662
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 663 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 722
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 723 GLSIVRTLVNKMGGEI 738
GL I + LVN+MGG+I
Sbjct: 485 GLVITQKLVNEMGGDI 500
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
FDLILMD QMP MDG A I + + + P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---QQTPVIAVTAHAMAGQKEKLL 760
Query: 1141 GVGMNAYLTKPIDSERMVSTILR 1163
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O157:H7 GN=barA PE=3 SV=1
Length = 918
Score = 162 bits (409), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 144/256 (56%), Gaps = 38/256 (14%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 542
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 543 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 602
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 603 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 662
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 663 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 722
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 723 GLSIVRTLVNKMGGEI 738
GL I + LVN+MGG+I
Sbjct: 485 GLVITQKLVNEMGGDI 500
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
FDLILMD QMP MDG A I + + + P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---QQTPVIAVTAHAMAGQKEKLL 760
Query: 1141 GVGMNAYLTKPIDSERMVSTILR 1163
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase BarA OS=Shigella
flexneri GN=barA PE=3 SV=1
Length = 918
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 144/256 (56%), Gaps = 38/256 (14%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 542
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 543 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 602
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 603 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 662
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 663 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 722
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 723 GLSIVRTLVNKMGGEI 738
GL I + LVN+MGG+I
Sbjct: 485 GLVITQKLVNEMGGDI 500
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
FDLILMD QMP MDG A I + + R P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---RQTPVIAVTAHAMAGQKEKLL 760
Query: 1141 GVGMNAYLTKPIDSERMVSTILR 1163
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1
Length = 1176
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 32/343 (9%)
Query: 447 ISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHEL 506
I+ S+ +LVI + IL +++ + + + + +AEA++ KSQFLA +SHE+
Sbjct: 540 ITPSILVLVITFLVGYILYEAINRIATVEEDCQKMRELKARAEAADIAKSQFLATVSHEI 599
Query: 507 RTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELEN 566
RTPM ++G+L++L D L +Q S L L+N +LD +K+ESG++ELEN
Sbjct: 600 RTPMNGVLGMLKMLMDTD-LDAKQMDYAQTAHGSGKDLTSLINEVLDQAKIESGRLELEN 658
Query: 567 TEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKF 626
FD++ L+ + + S + + +E + +S +P V GDP R QI +NL+ NSIKF
Sbjct: 659 VPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVVGDPSRFRQIITNLVGNSIKF 718
Query: 627 TSS-GHIII---------------------RGWCENLDTSKNTAEFPTDRKKFG--RAFR 662
T GHI I R ++ + + FP +G + F+
Sbjct: 719 TQERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPA-VNAWGSWKNFK 777
Query: 663 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 722
T ++ N+ +++ L V+DTG GI +F F Q D ST+R +GGTG+
Sbjct: 778 TCYSTESQNS------DQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGI 831
Query: 723 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQI 765
GLSI + LV M GE+ V + G+ + G + + I
Sbjct: 832 GLSISKRLVELMQGEMGFVSEPGIGSTFSFTGVFGKAETNTSI 874
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 39/168 (23%)
Query: 1014 NQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRR 1073
N +L +IL+ +D + + VA L+K GA V+ V G A+ L
Sbjct: 1027 NLGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLK----------- 1075
Query: 1074 SLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGAR------------- 1120
P FD MD QMP+MDG+EAT +R+ E E +
Sbjct: 1076 ------PPHN-----FDACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCK 1124
Query: 1121 ----NIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL 1164
++PI+A+TA + A ++C+ GM+ Y++KP + E + + + R
Sbjct: 1125 FSSWHVPILAMTADVIQATHEECMKCGMDGYVSKPFEEEVLYTAVARF 1172
>sp|P48027|GACS_PSESY Sensor protein GacS OS=Pseudomonas syringae pv. syringae GN=gacS
PE=3 SV=1
Length = 907
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 149/281 (53%), Gaps = 36/281 (12%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
AR++A ++ KS+FLANMSHE+RTP+ I+G +L+ +LT Q+ + I+KS+
Sbjct: 264 ARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKS-ELTPRQFDYLGTIEKSADN 322
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
LL ++N ILD SK+E+GK+ L+N F+L+ L++ + + + +E V + + P
Sbjct: 323 LLSIINEILDFSKIEAGKLVLDNIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPL 382
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
+ GDP R+ QI +NL++N+IKFT G I+ R E D ++ A+
Sbjct: 383 ALSGDPLRLRQILTNLVSNAIKFTREGTIVARAMLE--DETEEHAQ-------------- 426
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
L V DTG G+ +F++F Q D S +R+ GGTGLG
Sbjct: 427 -------------------LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLG 467
Query: 724 LSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQ 764
L I + L+ +MGGEI V G+ + L L + E K+
Sbjct: 468 LVISKRLIEQMGGEIGVDSTPGEGSEFWISLKLPKAREDKE 508
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 23/143 (16%)
Query: 1023 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1082
R+L +D P ++ +LE +GA V V G AV A+ +
Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQ------------------- 698
Query: 1083 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGV 1142
FDL+LMD QMP MDG +AT IR E+E ++PIVALTAHAM +++ L
Sbjct: 699 ----EAFDLVLMDVQMPGMDGRQATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQS 754
Query: 1143 GMNAYLTKPIDSERMVSTILRLT 1165
GM+ YLTKPI ++ +L+ T
Sbjct: 755 GMDDYLTKPISERQLAQVVLKWT 777
>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K OS=Dictyostelium
discoideum GN=dhkK PE=1 SV=1
Length = 1213
Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 165/321 (51%), Gaps = 35/321 (10%)
Query: 428 REYIMGKADERAYKTLIILISASVCIL-VIGCICILILTNGVSKEMKLR-AELISHLDAR 485
EY+ G + +I ++ I+ +I +C + +E KL+ A+L DA
Sbjct: 750 HEYVQGIPSIIIRSHMNFIIDVTIIIMTLIFTLCYQYFIDEAHRETKLKNAQLTIAKDAA 809
Query: 486 RKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALL 545
+A + + +FLA MSHE+RTP+ +IG+ +L+ L E+ + +K LL
Sbjct: 810 IEAYQA---RQEFLATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMAKAVKSCGDILL 866
Query: 546 RLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNV 605
RL+N ILDLSK+E+ +M LE+ F +++ +++ + S Q + N+ ++SD IP +
Sbjct: 867 RLVNDILDLSKLEANQMGLEHIPFRMRELTQQICHVLSGQANEKNIHLSCEVSDKIPSIL 926
Query: 606 RGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKL 665
GD GR+ QI NL N++KFT SG++ I +D + +E + +K
Sbjct: 927 LGDSGRILQILMNLTGNALKFTQSGYVKII-----IDLIEEESELVSLKK---------- 971
Query: 666 KQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLS 725
+ + F V DTG G+ + +FE+F Q DPS +RK+GG+GLGL
Sbjct: 972 -------------GEYNISFRVKDTGIGVPVESHQKIFEAFVQADPSDSRKYGGSGLGLY 1018
Query: 726 IVRTLVNKMGGEIKVVKKNSP 746
+ LV M GEI V N+P
Sbjct: 1019 LCAKLVRLMKGEIGVY--NNP 1037
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 1003 DQPCSSSNSSSNQKRILEG-LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEAL 1061
DQ N+ + K + +++L+AED + Q VA K LEK+G V +G + +E L
Sbjct: 1055 DQSMQQMNNGARHKAFPQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVLEIL 1114
Query: 1062 NRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHG--- 1118
R +DLI MD QMP +DG + IR+ E H
Sbjct: 1115 ERQ-----------------------HYDLIFMDFQMPILDGLRCSKTIREFEQNHKWNR 1151
Query: 1119 -ARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1161
+I I LTA+ M+ D+K+C GMN +++KP E++ S I
Sbjct: 1152 ICPSIFICGLTANTMSTDKKRCFDHGMNHFISKPFQLEQLRSAI 1195
>sp|Q551X9|DHKF_DICDI Hybrid signal transduction histidine kinase F OS=Dictyostelium
discoideum GN=dhkF PE=3 SV=1
Length = 1109
Score = 154 bits (388), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 45/287 (15%)
Query: 470 KEMKLRAELISHLDARRKAE---------ASNNYKSQFLANMSHELRTPMAAIIGLLEIL 520
KEM + + S L+ +R E + KSQFLA +SHE+RTP+ II + E+L
Sbjct: 284 KEMNIELQKKSELEQKRNQELMEARDLALTATKIKSQFLATISHEIRTPLNGIITMGEML 343
Query: 521 KSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 580
S L EQ+ I SS LL + + ILD SK+E+ K+ELE EFD LE +
Sbjct: 344 LSTSPLNTEQHDIAETIFGSSELLLSITSDILDFSKIEASKLELEMIEFDFIGCLEGIGK 403
Query: 581 MFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCEN 640
V +N +E + +IP + GDP R+ QI N+ N++K+T GHI+ R
Sbjct: 404 TIGVSITNKPIEIAFLMDTDIPHRLIGDPNRLIQIMLNMGTNAVKYTDRGHIVFRI---- 459
Query: 641 LDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWE 700
++ RE N+ + +DD+G GI + +
Sbjct: 460 -------------------------------SVISREQNRCKIKISIDDSGIGIGEDQRA 488
Query: 701 TVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPG 747
+FE F Q D S+TRK+GG+GLGL+I L MGGE+ +++++ PG
Sbjct: 489 HLFEPFHQIDSSSTRKYGGSGLGLAISSKLAKLMGGEV-ILERSKPG 534
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 1023 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1082
RILL +D + + V L+K+G +G + E +
Sbjct: 928 RILLVDDNAVNRKVVKLQLKKLGYDCDTATNGFEGFEMQKK------------------- 968
Query: 1083 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARN-IPIVALTAHAMNADEKKCLG 1141
++LI MD MP DG A+ IR E + ++ IV L+A ++ + C+
Sbjct: 969 ----DNYELIFMDLNMPLCDGSMASKLIRSHEELNNYKSRANIVGLSATYLHGSKDYCVS 1024
Query: 1142 VGMNAYLTKPI 1152
+GM+ ++ KP+
Sbjct: 1025 MGMDDFVVKPL 1035
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 36/263 (13%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
A R+A +N KS+FLANMSHE RTP+ + G+ E+L + +L EQ + I+ S+ +
Sbjct: 178 AVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATT-RLDAEQKECLNTIQASARS 236
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
LL L+ +LD+S +E+GK+ ++ +F L++ + + + Q +E ++D++P
Sbjct: 237 LLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPD 296
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
++GD + Q+ NL+ N++KFT GH+++R T
Sbjct: 297 LLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLR--------------------------VT 330
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
++ A +A+ R F+V+DTG G+ +FE+FEQ D +R++ GTGLG
Sbjct: 331 RVSGSAEDAVRLR--------FDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLG 382
Query: 724 LSIVRTLVNKMGGEIKVVKKNSP 746
+I + LV MGG I K+N P
Sbjct: 383 TTIAKGLVEAMGGSIG-FKENQP 404
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 1009 SNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAE 1068
SN + + +R+L+A+D ++V ++LEK G V V Q ++A+ AE
Sbjct: 449 SNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AE 503
Query: 1069 SSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALT 1128
+D +++D MP M+G + ++R ++ G R P+V L+
Sbjct: 504 ED------------------YDAVIVDLHMPGMNGLDMLKQLRVMQAS-GMRYTPVVVLS 544
Query: 1129 AHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL---TKNMPSEAT 1173
A + C G A+L KP+ + +++ T+ L T+ + + AT
Sbjct: 545 ADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADLAVSTRQLATPAT 592
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 150 bits (378), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 36/263 (13%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
A R+A +N KS+FLANMSHE RTP+ + G+ E+L + +L EQ + I+ S+ +
Sbjct: 178 AVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATT-RLDAEQKECLNTIQASARS 236
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
LL L+ +LD+S +E+GK+ ++ +F L++ + + + Q +E ++D++P
Sbjct: 237 LLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPD 296
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
++GD + Q+ NL+ N++KFT GH+++R T
Sbjct: 297 LLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLR--------------------------VT 330
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
++ A +A+ R F+V+DTG G+ +FE+FEQ D +R++ GTGLG
Sbjct: 331 RVSGSAEDAVRLR--------FDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLG 382
Query: 724 LSIVRTLVNKMGGEIKVVKKNSP 746
+I + LV MGG I K+N P
Sbjct: 383 TTIAKGLVEAMGGSIG-FKENQP 404
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 1009 SNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAE 1068
SN + + +R+L+A+D ++V ++LEK G V V Q ++A+ AE
Sbjct: 449 SNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AE 503
Query: 1069 SSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALT 1128
+D +++D MP M+G + ++R ++ G R P+V L+
Sbjct: 504 ED------------------YDAVIVDLHMPGMNGLDMLKQLRVMQAS-GMRYTPVVVLS 544
Query: 1129 AHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL---TKNMPSEAT 1173
A + C G A+L KP+ + +++ T+ L T+ + + AT
Sbjct: 545 ADVTPEAIRACEQAGARAFLAKPVLAAKLLDTLADLAVSTRQLATPAT 592
>sp|Q87GU5|LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=luxQ PE=3 SV=1
Length = 858
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 40/288 (13%)
Query: 463 ILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKS 522
I+ G + AE S+L ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK
Sbjct: 451 IIVQGQDITTLIEAEKQSNL-ARREAEKSAQARADFLAKMSHEIRTPINGILGVAQLLK- 508
Query: 523 DDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMF 582
D EQ + + ++ S LL +LN ILD SK+E GK ++ F + L +++
Sbjct: 509 DSVEAEEQKNQIDVLRHSGEHLLAVLNDILDFSKIEQGKFNIQKHPFSFADTMRTLENIY 568
Query: 583 SVQCSNHNVETVLD--LSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCEN 640
C N VE V++ L N+ + D R+ QI NL++N++KFT SG + + E
Sbjct: 569 RPICENKGVELVIENQLDGNV--EIFTDQVRLNQILFNLVSNAVKFTPSGCVRLHAELEQ 626
Query: 641 LDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWE 700
+ N+ L E+ DTG GI+ K +
Sbjct: 627 FYGADNS----------------------------------VLVVEISDTGIGIESDKLD 652
Query: 701 TVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 748
+FE F Q + +TTR++GG+GLGL+IV+ LV+ + G+++V + GT
Sbjct: 653 EMFEPFVQEEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQKGQGT 700
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 1005 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 1064
P SS + E L++LL ED + K V DGL+A+E L
Sbjct: 717 PLDSSQRVKPAELFDESLKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLK-- 774
Query: 1065 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPI 1124
+DLILMD Q+P + G E T EIR++ PI
Sbjct: 775 ---------------------DHSYDLILMDNQLPHLGGIETTKEIRQNLK----LGTPI 809
Query: 1125 VALTAHAMNADEKKCLGVGMNAYLTKPI 1152
A TA + G N L KPI
Sbjct: 810 YACTADTAQETSDAFMEAGANYVLLKPI 837
>sp|Q869S5|DOKA_DICDI Hybrid signal transduction protein dokA OS=Dictyostelium discoideum
GN=dokA PE=1 SV=1
Length = 1671
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 145/273 (53%), Gaps = 38/273 (13%)
Query: 477 ELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQ 536
+L + A A + K+QF+ N+SHELRTP I+G+ ++L D QLTN Q +
Sbjct: 1026 DLSRYRQAEMAAIEATRLKTQFITNISHELRTPCHGIVGMSQLLL-DSQLTNTQRDNIDS 1084
Query: 537 IKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLD 596
IK+S+ +L+ L+N ILD SK+E GK+ LEN F+L +EE++D + + ++ +
Sbjct: 1085 IKRSTDSLISLINDILDFSKLEYGKVTLENESFELLPMIEEVLDSQATAANRKGIDLIFV 1144
Query: 597 LSDN--IPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDR 654
+ + +P + GD + ++ NL+ N++KFT +G +++ E TD
Sbjct: 1145 MGRDYPVPPVIFGDRNSLKKVLLNLVGNAVKFTETGFVLL--------------EISTD- 1189
Query: 655 KKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTT 714
+ ++++L F V D+G GI ++K E +F F Q D S +
Sbjct: 1190 --------------------YESGDQISLRFTVKDSGIGIPENKIEQIFVPFGQIDGSFS 1229
Query: 715 RKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPG 747
RK+GG+GLGLS + LV MGG I+V + G
Sbjct: 1230 RKYGGSGLGLSFCKELVALMGGYIRVESGDQEG 1262
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 28/138 (20%)
Query: 1024 ILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSET 1083
IL+AED + V + LEK+G T V +GL+A+E +
Sbjct: 1520 ILVAEDNDINIKVVVRQLEKLGYTAIVGINGLKALEIIGSFPIC---------------- 1563
Query: 1084 PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVG 1143
LIL+DCQMP+MDG+ + +R+ E G R IPI+A+TA N + +C VG
Sbjct: 1564 -------LILLDCQMPQMDGFTCSTILRQIEPT-GQR-IPIIAMTA---NDSKDRCFEVG 1611
Query: 1144 MNAYLTKPIDSERMVSTI 1161
M+ YL+KP+ +R+ T+
Sbjct: 1612 MDDYLSKPVRVDRLQKTL 1629
>sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain CMCP6) GN=luxQ PE=3 SV=1
Length = 857
Score = 143 bits (361), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 44/294 (14%)
Query: 463 ILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKS 522
I+ G + AE S+L ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK
Sbjct: 453 IIVQGQDITTLIDAEKQSNL-ARREAEQSAKTRADFLAKMSHEIRTPLNGILGIAQLLKR 511
Query: 523 --DDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 580
+D +Q +C S LL +LN ILD SK+E GK ++ +F+ L L +
Sbjct: 512 SVNDAENLKQVDVLC---NSGEHLLAVLNDILDFSKIEQGKFNIKKRDFNFYDTLNTLEN 568
Query: 581 MFSVQCSNHNVETVLDLSDNIPRN--VRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC 638
++ C V ++ + IP + + D R+ QI NLI+N++KFT +G I
Sbjct: 569 IYRPICREKGVS--FEIHNQIPLDCQLHTDQVRLNQIMFNLISNAVKFTPAGRI------ 620
Query: 639 ENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSK 698
E +KF R+ + L +V DTG GID+SK
Sbjct: 621 ----------EVSFKLEKFARSEHS------------------ILSIQVSDTGIGIDESK 652
Query: 699 WETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQL 752
E++FE F Q D +TR++GG+GLGL+IV+ LV + GEI V + G+ L
Sbjct: 653 LESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSELCKGSTFYL 706
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 1020 EGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGS 1079
+GL++LL ED + +K +V V DG QA+E L
Sbjct: 732 QGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEH--------------- 776
Query: 1080 PSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKC 1139
FDLILMD Q+PKM G EAT EIR++ PI A TA A + +++
Sbjct: 777 --------AFDLILMDNQLPKMGGIEATREIRETLK----LGTPIYACTADAQESTKQEF 824
Query: 1140 LGVGMNAYLTKPIDSERMVSTILRL 1164
L G N + KPI + + +L
Sbjct: 825 LSAGANRVIVKPIKEQELHDELLHF 849
>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=luxQ PE=1 SV=1
Length = 857
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 43/304 (14%)
Query: 453 ILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAA 512
I+V G I I I+T G AE S ARR+AE S +++FLA MSHELRTP+
Sbjct: 440 IMVEGQI-ISIITQGQDITTIAEAEKQSQA-ARREAEESARVRAEFLAKMSHELRTPLNG 497
Query: 513 IIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQ 572
++G+ ++LK L +EQ V + S LL +LN ILD S++E GK ++ EF L
Sbjct: 498 VLGVSQLLKRTP-LNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRL- 555
Query: 573 KELEELVD-MFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGH 631
KEL +D ++ C+ +E V++ + VR D R+ QI NL+NN+IKFT G
Sbjct: 556 KELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGS 615
Query: 632 IIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDT 690
I R +L+ E + LA L +V DT
Sbjct: 616 I-----------------------------RVELQ--------LIEGDPLAQLVIQVVDT 638
Query: 691 GCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLM 750
G GI + +FE F Q + +TTR++GG+GLGL+IV +LV + G++ V + GT
Sbjct: 639 GIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRF 698
Query: 751 QLYL 754
++ L
Sbjct: 699 EIQL 702
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 57/138 (41%), Gaps = 31/138 (22%)
Query: 1022 LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1081
LR+LL ED +A K G VS V DGLQA+E L
Sbjct: 730 LRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELK------------------- 770
Query: 1082 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIV--ALTAHAMNADEKKC 1139
+DL+LMD Q+P +DG E T I+K ++P+V A TA + +
Sbjct: 771 ----IHDYDLVLMDNQLPYLDGVETTRTIKK------VLHLPVVVYACTADGLEETRQAF 820
Query: 1140 LGVGMNAYLTKPIDSERM 1157
G L KP+ + +
Sbjct: 821 FHAGAEYVLVKPLKEQTL 838
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1
Length = 740
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ D LT+EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETD-LTSEQRLMVETILKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++L+ F+L ++ ++ S + L++S ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIATFNLHAVFRQVFNLIKPIASVKKLFITLNVSPDLPE 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
V GD R+ QI N++ N++KF+ G I + + ++ ++
Sbjct: 452 YVIGDEKRLVQIMLNVVGNAVKFSKEGIISVTAFVAKSESVRDP---------------- 495
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
+A + DN+ + +V D+G GI+ +F F Q P T+ GG+GLG
Sbjct: 496 ----RAPDFFPVSSDNQFYMRVQVKDSGSGINPQDMPKLFTKFAQSQPVATKNSGGSGLG 551
Query: 724 LSIVRTLVNKMGGEIKVVKKN-SPGTLMQLYLLLG---ASSESKQIY---------DADF 770
L+I + VN M G I + + S G + + LG S+E K DF
Sbjct: 552 LAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMPKVSANNSQTDF 611
Query: 771 PNTVVVLATVGSMERMI 787
P V+L + RM+
Sbjct: 612 PGLKVLLMDENGISRMV 628
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 998 GSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQA 1057
GS+ P S++N + GL++LL ++ + ++V +L +G V+ V
Sbjct: 590 GSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSS--- 646
Query: 1058 VEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEH 1117
E RM++ + ++ MD ++P +DG+E + I + +
Sbjct: 647 -EECLRMVSQDHK--------------------VVFMDVRVPGLDGHELAVRIHEKFMKR 685
Query: 1118 GARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTKN 1167
R + IVALT++A ++ CL VGM + KP+ ++M + + +L ++
Sbjct: 686 HERPL-IVALTSNADKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLLEH 734
>sp|P54302|LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio harveyi
GN=luxQ PE=1 SV=1
Length = 859
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 35/271 (12%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK D T EQ + + + S
Sbjct: 472 ARREAEKSAQARADFLAKMSHEIRTPINGILGVAQLLK-DSVDTQEQKNQIDVLCHSGEH 530
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
LL +LN ILD SK+E GK ++ F + L +++ C+N VE V++ +
Sbjct: 531 LLAVLNDILDFSKIEQGKFNIQKHPFSFTDTMRTLENIYRPICTNKGVELVIENELDPNV 590
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
+ D R+ QI NL++N++KFT G I + E ++N+
Sbjct: 591 EIFTDQVRLNQILFNLVSNAVKFTPIGSIRLHAELEQFYGAENS---------------- 634
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
L E+ DTG GI+ K + +FE F Q + +TTR++GG+GLG
Sbjct: 635 ------------------VLVVELTDTGIGIESDKLDQMFEPFVQEESTTTREYGGSGLG 676
Query: 724 LSIVRTLVNKMGGEIKVVKKNSPGTLMQLYL 754
L+IV+ LV+ + G+++V GT + L
Sbjct: 677 LTIVKNLVDMLEGDVQVRSSKGGGTTFVITL 707
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 27/133 (20%)
Query: 1020 EGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGS 1079
E L++LL ED + +K V DGL A+E L+
Sbjct: 733 ESLKVLLVEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLS----------------- 775
Query: 1080 PSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKC 1139
DT +DLILMD Q+P + G E T EIR++ PI A TA
Sbjct: 776 -----DTT-YDLILMDNQLPHLGGIETTHEIRQNLR----LGTPIYACTADTAKETSDAF 825
Query: 1140 LGVGMNAYLTKPI 1152
+ G N + KPI
Sbjct: 826 MAAGANYVMLKPI 838
>sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain YJ016) GN=luxQ PE=3 SV=1
Length = 857
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 44/294 (14%)
Query: 463 ILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKS 522
I+ G + AE S+L ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK
Sbjct: 453 IIVQGQDITTLIDAEKQSNL-ARREAEQSAKTRADFLAKMSHEIRTPLNGILGIAQLLKR 511
Query: 523 --DDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 580
+D +Q +C S LL +LN ILD SK+E GK ++ +F+ L L +
Sbjct: 512 SVNDAENLKQVDVLC---NSGEHLLAVLNDILDFSKIEQGKFNIKKRDFNFYDTLNTLEN 568
Query: 581 MFSVQCSNHNVETVLDLSDNIPRN--VRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC 638
++ C V ++ + IP + + D R+ QI NLI+N++KFT +G I
Sbjct: 569 IYRPICREKGVS--FEIHNQIPLDCQLHTDQVRLNQIMFNLISNAVKFTPAGRI------ 620
Query: 639 ENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSK 698
E ++F R+ + L +V DTG GID+SK
Sbjct: 621 ----------EVSFKLEQFARSEHS------------------ILSIQVSDTGIGIDESK 652
Query: 699 WETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQL 752
E++FE F Q D +TR++GG+GLGL+IV+ LV + GEI V + G+ L
Sbjct: 653 LESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSELCKGSTFYL 706
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 1020 EGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGS 1079
+GL++LL ED + +K +V V DG QA+E L
Sbjct: 732 QGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEH--------------- 776
Query: 1080 PSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKC 1139
FDLILMD Q+PKM G EAT EIR++ PI A TA A + +++
Sbjct: 777 --------AFDLILMDNQLPKMGGIEATREIRETLK----LGTPIYACTADAQESTKQEF 824
Query: 1140 LGVGMNAYLTKPIDSERMVSTILRL 1164
L G N + KPI + + +L
Sbjct: 825 LSAGANRVIVKPIKEQELHDELLHF 849
>sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase B OS=Dictyostelium
discoideum GN=dhkB PE=1 SV=1
Length = 1969
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 141/283 (49%), Gaps = 36/283 (12%)
Query: 475 RAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTV 534
R +L+ A RKAEA+N K FL +SHELRTP+ ++ +IL+ L + Q +
Sbjct: 941 RKQLMEADYALRKAEAANEAKVIFLTTVSHELRTPINGVLASADILERT-TLDSTQKEFL 999
Query: 535 CQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETV 594
IK S LL L+N ILD SK+E+GKME+ +F + K L+ + + S ++
Sbjct: 1000 NCIKLSGNYLLDLINDILDYSKIEAGKMEIIKYDFSILKMLDNSIRIVSKNIYEKGLDLC 1059
Query: 595 LDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDR 654
+ + N+P V GD R+ QI N ++NSIKFT+ G IIIR E+ D++ +
Sbjct: 1060 IFIDPNVPVIVNGDQRRIKQILLNFLSNSIKFTNHGQIIIRVKLESDDSTHS-------- 1111
Query: 655 KKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTT 714
+ F+V+D+G GI +F SF Q D +
Sbjct: 1112 ---------------------------LIKFDVEDSGIGIKTEHLNQLFASFSQIDSGNS 1144
Query: 715 RKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLG 757
RK+ GTGLGLSI + L MGG++KV + G+ + G
Sbjct: 1145 RKYQGTGLGLSISKRLCKMMGGDVKVKSEFGVGSTFSFTIPCG 1187
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 31/149 (20%)
Query: 1023 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1082
+ILL ED + + K+L+ G V +G++AVE + + G+
Sbjct: 1840 KILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEAVECVKK--------------GA--- 1882
Query: 1083 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIP--------IVALTAHAMNA 1134
+DLILMDCQMP+MDG+EAT IR+ E + + P IVALTA++
Sbjct: 1883 ------YDLILMDCQMPEMDGFEATTAIRELEKSNLIESPPSKKHSHVVIVALTANSGYK 1936
Query: 1135 DEKKCLGVGMNAYLTKPIDSERMVSTILR 1163
D++KCL VGMN +L KPI + ++ +++
Sbjct: 1937 DKQKCLSVGMNDFLQKPIKTSDILIQMIK 1965
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1
Length = 738
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 135/267 (50%), Gaps = 28/267 (10%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS+
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSHL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++LE F+L E+ ++ S + L+L+ ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLEIATFNLHSVFREVHNLIKPVASVKKLSVSLNLAADLPV 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC---ENLDTSKNTAEFPTDRKKFGRA 660
GD R+ QI N++ N++KF+ G I I + E+L + FP
Sbjct: 452 QAVGDEKRLMQIVLNVVGNAVKFSKEGSISITAFVAKSESLRDFRAPEFFPA-------- 503
Query: 661 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 720
+ DN L +V D+G GI+ +F F Q TR GG+
Sbjct: 504 ---------------QSDNHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQSLATRNSGGS 548
Query: 721 GLGLSIVRTLVNKMGGEIKVVKKNSPG 747
GLGL+I + VN M G I ++ PG
Sbjct: 549 GLGLAICKRFVNLMEGHIW-IESEGPG 574
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 1091 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1150
++ MD MP +DGYE + I + ++ R + +VALT + ++ C+ VGM+ + K
Sbjct: 656 VVFMDVCMPGIDGYELAVRIHEKFTKRHERPV-LVALTGNIDKMTKENCMRVGMDGVILK 714
Query: 1151 PIDSERMVSTILRLTKN 1167
P+ ++M S + L ++
Sbjct: 715 PVSVDKMRSVLSELLEH 731
>sp|P40330|BVGS_BORPA Virulence sensor protein BvgS OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=bvgS PE=3 SV=2
Length = 1238
Score = 140 bits (352), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 46/279 (16%)
Query: 475 RAELISHL-DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLE--ILKSDDQLTNEQY 531
RAEL+ L DA+ A+A+N K+ FLA MSHE+RTPM AIIG+LE +L+ DQ + Q
Sbjct: 699 RAELLRELHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPDRQS 758
Query: 532 STVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNV 591
V S+ +LL L+ ILD++K+E+GK +L L+ E + +F +
Sbjct: 759 IQVA--YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPEGAIRLFDGLARQKGI 816
Query: 592 ETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFP 651
E VL +V DP R+ Q+ SNL+ N+IKFT+ G +++
Sbjct: 817 ELVLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL----------------- 859
Query: 652 TDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDTGCGIDQSKWETVFESFEQ-G 709
+ R D + A + F V DTGCGI ++ +F+ F Q G
Sbjct: 860 --------------------TVTARPDGEAAHVQFSVSDTGCGISEADQRQLFKPFSQVG 899
Query: 710 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 748
+ GTGLGLSI R LV MGG + V +++PG
Sbjct: 900 GSAEAGPAPGTGLGLSISRRLVELMGGTL--VMRSAPGV 936
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1089 FDLILMDCQMPKMDGYE--ATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNA 1146
FD+++ DC MP ++GYE I ++ +G + TA A + ++C GM+
Sbjct: 1017 FDVVITDCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDD 1076
Query: 1147 YLTKPI 1152
L KPI
Sbjct: 1077 CLFKPI 1082
>sp|P26762|BVGS_BORBR Virulence sensor protein BvgS OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=bvgS PE=3 SV=2
Length = 1238
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 46/279 (16%)
Query: 475 RAELISHL-DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLE--ILKSDDQLTNEQY 531
RAEL+ L DA+ A+A+N K+ FLA MSHE+RTPM AIIG+LE +L+ DQ + Q
Sbjct: 699 RAELLRELHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPDRQS 758
Query: 532 STVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNV 591
V S+ +LL L+ ILD++K+E+GK +L L+ E + +F +
Sbjct: 759 IQVA--YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPEGAIRVFDGLARQKGI 816
Query: 592 ETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFP 651
E VL +V DP R+ Q+ SNL+ N+IKFT+ G +++
Sbjct: 817 ELVLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL----------------- 859
Query: 652 TDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDTGCGIDQSKWETVFESFEQ-G 709
+ R D + A + F V DTGCGI ++ +F+ F Q G
Sbjct: 860 --------------------TVTARPDGEAAHVQFSVSDTGCGISEADQRQLFKPFSQVG 899
Query: 710 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 748
+ GTGLGLSI R LV MGG + V +++PG
Sbjct: 900 GSAEAGPAPGTGLGLSISRRLVELMGGTL--VMRSAPGV 936
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1089 FDLILMDCQMPKMDGYE--ATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNA 1146
FD+++ DC MP ++GYE I ++ +G + TA A + ++C GM+
Sbjct: 1017 FDVVITDCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDD 1076
Query: 1147 YLTKPI 1152
L KPI
Sbjct: 1077 CLFKPI 1082
>sp|P16575|BVGS_BORPE Virulence sensor protein BvgS OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=bvgS PE=1 SV=3
Length = 1238
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 140/279 (50%), Gaps = 46/279 (16%)
Query: 475 RAELISHL-DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLE--ILKSDDQLTNEQY 531
RAEL+ L DA+ A+A+N K+ FLA MSHE+RTPM AIIG+LE +L+ DQ + Q
Sbjct: 699 RAELLRKLHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPTDQEPDRQS 758
Query: 532 STVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNV 591
V S+ +LL L+ ILD++K+E+GK +L L+ E + +F +
Sbjct: 759 IQVA--YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRVLPEGAIRVFDGLARQKGI 816
Query: 592 ETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFP 651
E VL +V DP R+ Q+ SNL+ N+IKFT+ G +++
Sbjct: 817 ELVLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL----------------- 859
Query: 652 TDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDTGCGIDQSKWETVFESFEQ-G 709
A+ R D A + F V DTGCGI ++ +F+ F Q G
Sbjct: 860 --------------------AVTARPDGDAAHVQFSVSDTGCGISEADQRQLFKPFSQVG 899
Query: 710 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 748
+ GTGLGLSI R LV MGG + V +++PG
Sbjct: 900 GSAEAGPAPGTGLGLSISRRLVELMGGTL--VMRSAPGV 936
Score = 40.4 bits (93), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1089 FDLILMDCQMPKMDGYEATIEIRKSESE--HGARNIPIVALTAHAMNADEKKCLGVGMNA 1146
FD+++ DC MP + GYE IR +E+ +G + TA A + ++C GM+
Sbjct: 1017 FDVVITDCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDD 1076
Query: 1147 YLTKPI 1152
L KPI
Sbjct: 1077 CLFKPI 1082
>sp|P58356|TORS_ECO57 Sensor protein TorS OS=Escherichia coli O157:H7 GN=torS PE=3 SV=1
Length = 914
Score = 138 bits (348), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 54/308 (17%)
Query: 469 SKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTN 528
++ +L+ +I H AR +AE ++ KS FLA MSHE+RTP+ I+G ++L +D+ N
Sbjct: 418 ARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLL-ADNPALN 476
Query: 529 EQYSTVCQIKKSSYALLRLLNRILDLSKVESG--KMELENTEFDLQKELEELVDMFSVQC 586
Q + I S +LL +LN ILD S +E+G + + + F+ + LE + + S +
Sbjct: 477 AQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRV 536
Query: 587 SNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKN 646
+ ++D++P + GDP R+ Q+ +NL++N+++FT G I++R
Sbjct: 537 KGRPIRLATAIADDVPTALMGDPRRIRQVITNLLSNALRFTDEGQIVLRSR--------- 587
Query: 647 TAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESF 706
TD +++ EV+D+GCGID +K +F+ F
Sbjct: 588 -----TDGEQW--------------------------LVEVEDSGCGIDPAKLAEIFQPF 616
Query: 707 EQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIY 766
Q + K GGTGLGL+I L MGGE+ G+ L L L ++
Sbjct: 617 IQ----VSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPL-------RVA 665
Query: 767 DADFPNTV 774
A P TV
Sbjct: 666 TAPVPKTV 673
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 36/160 (22%)
Query: 1014 NQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRR 1073
NQ L+GLR+LL ED PL Q + ++L GA V + + QA+E L
Sbjct: 674 NQAVRLDGLRLLLIEDNPLTQRITVEMLNTSGAQVVAIGNAAQALETLQ----------- 722
Query: 1074 SLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIP---IVALTAH 1130
++ F L+D +P ++G ++ AR P ++ +AH
Sbjct: 723 -----------NSEPFAAALVDFDLPDVNGITLARQL--------ARQYPSLVLIGFSAH 763
Query: 1131 AMNADEKKCLGVGMNAYLTKPIDSE---RMVSTILRLTKN 1167
++ ++ + KP+ E ++++ L+L N
Sbjct: 764 VIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQAN 803
>sp|P39453|TORS_ECOLI Sensor protein TorS OS=Escherichia coli (strain K12) GN=torS PE=1
SV=4
Length = 914
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 54/308 (17%)
Query: 469 SKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTN 528
++ +L+ +I H AR +AE ++ KS FLA MSHE+RTP+ I+G ++L +D+ N
Sbjct: 418 ARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLL-ADNPALN 476
Query: 529 EQYSTVCQIKKSSYALLRLLNRILDLSKVESG--KMELENTEFDLQKELEELVDMFSVQC 586
Q + I S +LL +LN ILD S +E+G + + + F+ + LE + + S +
Sbjct: 477 AQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRV 536
Query: 587 SNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKN 646
+ ++D++P + GDP R+ Q+ +NL++N+++FT G+II+R
Sbjct: 537 KGRPIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDEGYIILRSR--------- 587
Query: 647 TAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESF 706
TD +++ EV+D+GCGID +K +F+ F
Sbjct: 588 -----TDGEQW--------------------------LVEVEDSGCGIDPAKLAEIFQPF 616
Query: 707 EQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIY 766
Q + K GGTGLGL+I L MGGE+ G+ L L L ++
Sbjct: 617 VQ----VSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPL-------RVA 665
Query: 767 DADFPNTV 774
A P TV
Sbjct: 666 TAPVPKTV 673
Score = 42.0 bits (97), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 1014 NQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRR 1073
NQ L+GLR+LL ED PL Q + ++L+ GA + V + QA+E L
Sbjct: 674 NQAVRLDGLRLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQ----------- 722
Query: 1074 SLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMN 1133
++ F L+D +P +DG ++ + ++ ++ +AH ++
Sbjct: 723 -----------NSEPFAAALVDFDLPDIDGITLARQLAQQYP-----SLVLIGFSAHVID 766
Query: 1134 ADEKKCLGVGMNAYLTKPIDSE 1155
++ + KP+ E
Sbjct: 767 ETLRQRTSSLFRGIIPKPVPRE 788
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=1 SV=1
Length = 754
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 140/292 (47%), Gaps = 25/292 (8%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ D LT EQ V I KSS
Sbjct: 347 ARREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETD-LTPEQRLMVETILKSSNL 405
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++L+ F+L E+ + S + L LS ++P
Sbjct: 406 LATLINDVLDLSRLEDGSLQLDIGTFNLHALFREVHSLIKPIASVKKLFVTLSLSSDLPE 465
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
V GD R+ QI N++ N++KF+ G++ I + D+ ++
Sbjct: 466 YVIGDEKRLMQILLNVVGNAVKFSKEGNVSISAFVAKSDSLRD----------------- 508
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
+A +N L ++ DTG GI +F F Q T GGTGLG
Sbjct: 509 ---PRAPEFFAVPSENHFYLRVQIKDTGIGITPQDIPNLFSKFTQSQALATTNSGGTGLG 565
Query: 724 LSIVRTLVNKMGGEIKV----VKKNSPGTLMQLYLLLGASSESKQIYDADFP 771
L+I + VN M G I + + K S + + G ++ESK + P
Sbjct: 566 LAICKRFVNLMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLP 617
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 1086 TPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMN 1145
T +++MD M +D YE + I + + R + IVALT + ++ C+ VGM+
Sbjct: 668 THEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPL-IVALTGNTDRVTKENCMRVGMD 726
Query: 1146 AYLTKPIDSERMVSTILRLTKN 1167
+ KP+ +M S + L ++
Sbjct: 727 GVILKPVSVYKMRSVLSELLEH 748
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1
Length = 741
Score = 136 bits (343), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 21/255 (8%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I +SS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTAEQRLMVETILRSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++LE F+L E+ +M S + L+++ ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLEIATFNLHSVFREVHNMIKPVASIKRLSVTLNIAADLPM 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
GD R+ Q N++ N++KF+ G I I + ++ ++ FR
Sbjct: 452 YAIGDEKRLMQTILNVVGNAVKFSKEGSISITAFVAKSESLRD--------------FR- 496
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
A + + DN L +V D+G GI+ +F F Q TR GG+GLG
Sbjct: 497 -----APDFFPVQSDNHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQALATRNSGGSGLG 551
Query: 724 LSIVRTLVNKMGGEI 738
L+I + VN M G I
Sbjct: 552 LAICKRFVNLMEGHI 566
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
GL++L+ +D + + V +L +G V+ AV ++ +L S +
Sbjct: 613 GLKVLVMDDNGVSRSVTKGLLAHLGCDVT-------AVSLIDELLHVISQEHK------- 658
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
++ MD MP +DGYE + I + ++ R + +VALT ++ C+
Sbjct: 659 ----------VVFMDVSMPGIDGYELAVRIHEKFTKRHERPV-LVALTGSIDKITKENCM 707
Query: 1141 GVGMNAYLTKPIDSERMVSTILRLTKN 1167
VG++ + KP+ ++M S + L ++
Sbjct: 708 RVGVDGVILKPVSVDKMRSVLSELLEH 734
>sp|P49333|ETR1_ARATH Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1
Length = 738
Score = 134 bits (338), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 31/258 (12%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++LE F+L E++++ + L+L+ ++P
Sbjct: 392 LATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPE 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEF---PTDRKKFGRA 660
V GD R+ QI N++ N++KF+ G I + DT A+F PT G
Sbjct: 452 FVVGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTKSDT--RAADFFVVPT-----GSH 504
Query: 661 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 720
F ++K V D+G GI+ +F F Q TR GG+
Sbjct: 505 FYLRVK--------------------VKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGS 544
Query: 721 GLGLSIVRTLVNKMGGEI 738
GLGL+I + VN M G I
Sbjct: 545 GLGLAISKRFVNLMEGNI 562
Score = 38.5 bits (88), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 1091 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1150
++ MD MP ++ Y+ + I + ++ + +VAL+ + + ++KC+ G++ L K
Sbjct: 655 VVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLK 714
Query: 1151 PI 1152
P+
Sbjct: 715 PV 716
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1
Length = 741
Score = 133 bits (335), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 22/264 (8%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V + KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETVLKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++L+ F+L L E+ ++ S + L+++ ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIGTFNLHALLREVHNLIKPIASVKKLCISLNVATDLPE 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
GD R+ QI N++ N++KF+ G+I I + ++ ++
Sbjct: 452 YAVGDEKRLVQIILNVVGNAVKFSKEGNISITAFVAKSESLRDP---------------- 495
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
+A + +N+ L +V D+G GI+ +F F Q P T+ GG+GLG
Sbjct: 496 ----RAPDFFPICGENQFYLRVQVKDSGLGINPQDIPRLFTKFAQTQPVATKNSGGSGLG 551
Query: 724 LSIVRTLVNKMGGEIKVVKKNSPG 747
L+I + VN M G I + PG
Sbjct: 552 LAICKRFVNLMEGHIW-IDSEGPG 574
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
GL++LL +D + + V +L +G V+ V + L R+++ +
Sbjct: 613 GLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSS----DELLRVVSQD------------ 656
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
+ ++ MD MP++DG+E + I + R + IVALT + + C
Sbjct: 657 --------YKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPL-IVALTGNIDQVTKDNCT 707
Query: 1141 GVGMNAYLTKPIDSERM 1157
VGM + KP+ ++M
Sbjct: 708 RVGMEGVVLKPVSIDKM 724
>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G OS=Dictyostelium
discoideum GN=dhkG PE=3 SV=1
Length = 3432
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 153/304 (50%), Gaps = 35/304 (11%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIK-KSSY 542
A+ +AE +N KS F++NMSHE+RTP+ IIG +E+LKS + L N + I KSS
Sbjct: 2474 AKEEAEKANKAKSDFISNMSHEMRTPLNHIIGSIELLKSYNHLFNSDQKELLDISAKSSE 2533
Query: 543 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLS---D 599
+LL ++N ILDLSKVE GK +L T F+L LE+ + S V L ++
Sbjct: 2534 SLLFMVNNILDLSKVEQGKTKLNLTNFNLVSFLEDSICAISPNAHLKGVYIALFINPCLS 2593
Query: 600 NIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKK--- 656
IP V GD + Q+ NL+ N+IKFT SG + I+ L+ S N T+ KK
Sbjct: 2594 KIP--VIGDINILRQVIVNLLTNAIKFTESGQVYIK-----LNLSINNNPTTTNNKKQLN 2646
Query: 657 ----------------FGRAFRTKLKQQANNAMNFREDNKLALCF----EVDDTGCGIDQ 696
T + N + ++++ K C+ EV D+G GI
Sbjct: 2647 TDNDGDDDDDDDNENLDENNEDTSIDLDDNGKVIYQKNPKSNQCYIVNIEVVDSGIGIKN 2706
Query: 697 SKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLV-NKMGGEIKVVKKNSPGTLMQLYLL 755
+ +F+ F Q + + R + GTGLGLSIV+ LV N M G+I V K G+ +
Sbjct: 2707 EDFGKLFQRFSQIECGSNRAYDGTGLGLSIVKDLVCNLMKGDIGVKSKVGVGSTFHFCVE 2766
Query: 756 LGAS 759
LG S
Sbjct: 2767 LGKS 2770
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 1022 LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1081
L+IL+ ED + + K+L K+G + ALN + + ++
Sbjct: 3304 LKILIVEDNEMNANIMFKMLAKLGIQC-------EPHLALNGLEGVKKAKNE-------- 3348
Query: 1082 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLG 1141
+DLI+MD QMP M G AT IRK E + PIVA+TA AMN + K L
Sbjct: 3349 ------EYDLIIMDIQMPVMCGLTATSLIRKHEGT--KKRTPIVAITASAMNGEMSKALA 3400
Query: 1142 VGMNAYLTKPI 1152
G + YL+KP+
Sbjct: 3401 AGCDDYLSKPL 3411
>sp|O49230|ETR1_BRAOL Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1
Length = 735
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 29/284 (10%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V + KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETVLKSSSL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++LE F+L E++++ + L+L+ ++P
Sbjct: 392 LATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPE 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEF--PTDRKKFGRAF 661
V GD R+ QI N++ N++KF+ G I + D F PT G F
Sbjct: 452 FVVGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTKSDNRAPPDFFVVPT-----GSHF 506
Query: 662 RTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTG 721
++K V D G GI+ +F F Q TR GG+G
Sbjct: 507 YLRVK--------------------VKDLGAGINPQDIPKLFTKFAQTQSLATRSSGGSG 546
Query: 722 LGLSIVRTLVNKMGGEIKVVKKN-SPGTLMQLYLLLGASSESKQ 764
LGL+I + VN M G I + + G + L S+ESKQ
Sbjct: 547 LGLAISKRFVNLMEGNIWIESEGVGKGCTAIFDVKLAISNESKQ 590
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1091 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1150
++ MD P ++ Y+ + I + ++ R + +VALT + + ++KC+ G++ L K
Sbjct: 653 VVFMDVCTPGVENYQIALRIHEKFTKRHQRPL-LVALTGNTDKSTKEKCMSFGLDGVLLK 711
Query: 1151 PIDSERM 1157
P+ + M
Sbjct: 712 PVSLDNM 718
>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1
Length = 736
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 35/315 (11%)
Query: 468 VSKEMKLRAELISH---LD-ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSD 523
+ + M+ R LI LD ARR+AE + ++ FL M+HE+RTPM A++ L +L+ +
Sbjct: 311 LEESMRARDLLIEQNVALDLARREAETAVRARNDFLGVMNHEMRTPMHAVVALSSLLQ-E 369
Query: 524 DQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFS 583
+L EQ V I KSS L L+N +LDLS++E G ++L+ F+L E++++
Sbjct: 370 SELIPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDVGTFNLHALFREVLNLIK 429
Query: 584 VQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHI---IIRGWCEN 640
+ + L LS + P GD R+ QI N++ N++KF+ G + + E+
Sbjct: 430 PVAAVKKLFVTLSLSSDFPEVAIGDEKRLMQILLNVVGNAVKFSKEGSVSVSAVNAKSES 489
Query: 641 LDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWE 700
L + FP + +N L +V DTG GI+ +
Sbjct: 490 LIDPRAPEFFPV-----------------------QSENHFYLRVQVKDTGSGINPQDFP 526
Query: 701 TVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKV----VKKNSPGTLMQLYLLL 756
+F F Q T+ GTGLGL+I + VN M G I + V K S + +
Sbjct: 527 KLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHIWIESEGVGKGSTAIFIVKLGIP 586
Query: 757 GASSESKQIYDADFP 771
G +ESK + A P
Sbjct: 587 GRLNESKLPFTAGLP 601
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 1005 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 1064
P ++ +++ + +GL++L+ +D ++V +L +G V+ + G + + L R
Sbjct: 595 PFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRILTR- 653
Query: 1065 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPI 1124
+++MD + M+ Y+ + + + + R + I
Sbjct: 654 -----------------------EHKVLIMDASITGMNCYDVAVSVHEKFGKRLERPL-I 689
Query: 1125 VALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1161
VALT + ++ CL VGM+ + KP+ ++M S +
Sbjct: 690 VALTGNTDQVTKENCLRVGMDGVILKPVSIDKMRSVL 726
>sp|Q3S4A7|AHK5_ARATH Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=2 SV=1
Length = 922
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 140/258 (54%), Gaps = 16/258 (6%)
Query: 497 QFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSK 556
Q LA MSHE+R+P++ ++G+ EIL S +L EQ + + S +L+L+N ILDLSK
Sbjct: 369 QMLATMSHEIRSPLSGVVGMAEIL-STTKLDKEQRQLLNVMISSGDLVLQLINDILDLSK 427
Query: 557 VESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIF 616
VESG M LE T+F +E+ + V + ++ +++D++P V GD R+ QI
Sbjct: 428 VESGVMRLEATKF-RPREVVKHVLQTAAASLKKSLTLEGNIADDVPIEVVGDVLRIRQIL 486
Query: 617 SNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFR 676
+NLI+N+IKFT G++ I+ + F D A ++ N +
Sbjct: 487 TNLISNAIKFTHEGNVGIKLQV------ISEPSFVRDN-----ALNADTEEHEQNGLT-- 533
Query: 677 EDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGG 736
+ + +C +V DTG GI ++ +F+ + Q RK+GGTGLGL+I + LV MGG
Sbjct: 534 -ETSVWICCDVWDTGIGIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGG 592
Query: 737 EIKVVKKNSPGTLMQLYL 754
++ V + S G+ L
Sbjct: 593 QLTVTSRVSEGSTFTFIL 610
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 46/158 (29%)
Query: 1023 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1082
+ILL ED + +VA +++++G T+ + +G++A+ A+N
Sbjct: 779 KILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAIN-------------------- 818
Query: 1083 TPDTPRFDLILMDCQMPKMDGYEAT-------------------IEIRKSESEH----GA 1119
+ +DL+LMD MP +DG +AT ++I SE+E
Sbjct: 819 ---SSSYDLVLMDVCMPVLDGLKATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPT 875
Query: 1120 RNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERM 1157
+PI+A+TA+ + ++C GM+++++KP+ +++
Sbjct: 876 NRLPIIAMTANTLAESSEECYANGMDSFISKPVTLQKL 913
>sp|Q38846|ERS1_ARATH Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1
SV=1
Length = 613
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
AR++AE + + ++ FLA M+HE+RTPM AII L L + +L+ EQ + I KSS
Sbjct: 333 ARQEAEMAVHARNDFLAVMNHEMRTPMHAII-SLSSLLLETELSPEQRVMIETILKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
+ L++ +LDLS++E G + LEN F LQ EE++ + S + T L LS ++P
Sbjct: 392 VATLISDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSADLPT 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
GD R+ Q N++ N++KFT G+I I ++ ++ E P+ F
Sbjct: 452 YAIGDEKRLMQTILNIMGNAVKFTKEGYISIIA---SIMKPESLQELPSPE------FFP 502
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
L D+ LC +V DTGCGI +F F Q T R H G GLG
Sbjct: 503 VLS-----------DSHFYLCVQVKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLG 551
Query: 724 LSIVRTLVNKMGG 736
L++ + V MGG
Sbjct: 552 LALCKRFVGLMGG 564
>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1
Length = 738
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 27/258 (10%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM A+I L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAVIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLSK+E G ++L++ F+L E++++ S + +L+L+ ++P
Sbjct: 392 LATLINDVLDLSKLEDGSLQLDSGTFNLHAVFREVLNLIKPIASVKKLLLLLNLAPDLPE 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAE---FPTDRKKFGRA 660
GD R+ QI N++ N++KF+ G I I L++ ++ FPT
Sbjct: 452 YAVGDEKRLIQIILNIVGNAMKFSKEGSISITAIVAKLESLRDARVPDFFPTP------- 504
Query: 661 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 720
+N L +V D+G GI+ +F F Q + R G+
Sbjct: 505 ----------------SENHFYLRVQVKDSGVGINPQDIPKLFIKFAQTQTTGARNSSGS 548
Query: 721 GLGLSIVRTLVNKMGGEI 738
GLGL+I R VN M G I
Sbjct: 549 GLGLAICRRFVNLMDGHI 566
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 27/157 (17%)
Query: 1005 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 1064
P S + + + GL++LL +D + ++V +L +G V+ V + +
Sbjct: 597 PFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIR----- 651
Query: 1065 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPI 1124
+A++ R ++ MD MP +G+EA + + + ++ R + +
Sbjct: 652 VASQDHR-------------------VVFMDVGMP--EGFEAAVRLHEKFTKRHERPL-V 689
Query: 1125 VALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1161
VALTA ++ C+ VGM+ + KP+ ++M S +
Sbjct: 690 VALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVL 726
>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1
Length = 738
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 331 ARREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 389
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++L+ F+L +++++ S N + L P
Sbjct: 390 LATLINDVLDLSRLEDGSLQLDVGTFNLHVLFRKVLNLIKPIASVKNCLSRLTCLQICPE 449
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC---ENLDTSKNTAEFPTDRKKFGRA 660
GD R+ QI N++ N++KF+ G + I E+L + FP
Sbjct: 450 FAIGDEKRLMQILLNVVGNAVKFSKEGSVSISAVAAKSESLSDPRAPEFFPV-------- 501
Query: 661 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 720
+ +N L +V DTG GI+ +F F Q T+ GGT
Sbjct: 502 ---------------QSENHFYLRVQVKDTGSGINPQDIPKLFCKFAQNQALATKSSGGT 546
Query: 721 GLGLSIVRTLVNKMGGEIKV----VKKNSPGTLMQLYLLLGASSESKQIYDADFP 771
GLGL+I + VN M G I + + K S + + G S+E K + P
Sbjct: 547 GLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLP 601
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 1012 SSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSR 1071
+++ + +GL++L+ +D ++V +L +G V+ V G + + L
Sbjct: 602 ANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVL---------- 651
Query: 1072 RRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHA 1131
T ++ MD +P +D YE ++I + +H R + IVALT +
Sbjct: 652 --------------TQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPL-IVALTGNT 696
Query: 1132 MNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTKN 1167
++ C+ VGM+ + KP+ ++M S + L ++
Sbjct: 697 DRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEH 732
>sp|Q9HUI3|ARUS_PSEAE Sensor histidine kinase AruS OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aruS PE=3
SV=1
Length = 998
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 36/265 (13%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
A+ +AEA++ KS+FLA MSHE+RTP+ I+G+ E+L+ + L + + +
Sbjct: 496 AKDQAEAADRAKSRFLATMSHEIRTPLNGILGMAELLR-EASLGERDRQRLRALATAGEG 554
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
LL +LN +L +++E E +F L+ LE+++ + + + L L +
Sbjct: 555 LLAILNEVLHFARLEEAPDVPEAVDFSLRSLLEDVLTLLEPRARENATRLDLWLDPQVHD 614
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
RG + Q+ +NL+ N++KFT +G + R
Sbjct: 615 GHRGAEQFLRQVLTNLLGNAVKFTEAGEV-----------------------------RV 645
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
++++ A +A + R L V D G GI + E +FE F QG + TR++GGTGLG
Sbjct: 646 RVERLARSAGSER------LRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLG 699
Query: 724 LSIVRTLVNKMGGEIKVVKKNSPGT 748
L+I + LV +GG I V + G+
Sbjct: 700 LAISKRLVEALGGRIGVESRVGQGS 724
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 1022 LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1081
L +LL ED L + VA +LE+ G V + D A+ AL R
Sbjct: 750 LEVLLVEDVALNREVAQGLLERDGHRVMLAEDAGPAL-ALCRQR---------------- 792
Query: 1082 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLG 1141
RFDLIL+D +P M G E IR+ + + R PI A TA ++
Sbjct: 793 ------RFDLILLDMHLPGMAGLELCAGIRR-QLDGLNRATPIFAFTASIQPDMVRRYFA 845
Query: 1142 VGMNAYLTKPIDSERMVSTILRLTKNMPSEAT 1173
GM L KP+ + + + + ++P+ A
Sbjct: 846 AGMQGVLGKPLRMDELRRALGEVGTSVPALAV 877
>sp|Q9P7Q7|MAK1_SCHPO Peroxide stress-activated histidine kinase mak1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak1 PE=3 SV=1
Length = 1639
Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 38/269 (14%)
Query: 480 SHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKK 539
S+++A+R + K Q+L+NMSHE+RTP+ I G++ L + Q++ EQ S I++
Sbjct: 983 SNIEAQRIVRS----KMQYLSNMSHEIRTPLIGITGMVSFLL-ETQMSAEQLSYARIIQQ 1037
Query: 540 SSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSD 599
S+ +LL ++N ILDLSKV +G M+L + F ++ +E+ + + +E +
Sbjct: 1038 SAKSLLTVINDILDLSKVRAGMMKLTSQRFSVRAMMEDANETLGTLAFSKGIELNYTVDI 1097
Query: 600 NIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGR 659
++P V GD R+ Q+ N+I N+IKFT+ G + R E +D S NT
Sbjct: 1098 DVPDIVFGDNMRMRQVALNVIGNAIKFTNVGEVFTRCSVEKIDYSTNT------------ 1145
Query: 660 AFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGG 719
+ L +E DTG G ++ +F+ F Q + ST +HGG
Sbjct: 1146 ---------------------VVLKWECIDTGQGFNRDDQLQMFKPFSQVESSTLPRHGG 1184
Query: 720 TGLGLSIVRTLVNKMGGEIKVVKKNSPGT 748
+GLGL I + LV G + + GT
Sbjct: 1185 SGLGLVISKELVELHNGSMSCQSRRGVGT 1213
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 75/148 (50%), Gaps = 23/148 (15%)
Query: 1021 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1080
G +LLAED + V + LE++G V DGLQ VE R
Sbjct: 1505 GFSVLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKR----------------- 1547
Query: 1081 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1140
E P+ + LILMD QMP MDGY+A EIRK E E+ +PIVAL+A+A+ C
Sbjct: 1548 -EKPNF--YSLILMDLQMPVMDGYQACNEIRKYELENDYPKVPIVALSANALPHVVLSCK 1604
Query: 1141 GVGMNAYLTKPIDSERM---VSTILRLT 1165
G ++YL KPI + + +S IL T
Sbjct: 1605 DSGFDSYLAKPITLQHLSLIISGILNYT 1632
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1
Length = 740
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 126/255 (49%), Gaps = 22/255 (8%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE +N+ ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETANHARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++L+ F+L +E++++ + L L ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGLDLPV 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
GD R+ Q N++ N++KF+ G I I +T FR
Sbjct: 452 FAVGDEKRLMQAILNVVGNAVKFSKEGSISISAIVAKAET-----------------FR- 493
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
+ + + D+ L +V DTG GI +F F Q R G+GLG
Sbjct: 494 --EIRVPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTTVG-PRNSCGSGLG 550
Query: 724 LSIVRTLVNKMGGEI 738
L+I + VN M G I
Sbjct: 551 LAICKRFVNLMEGHI 565
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 1091 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1150
++ MD P +DGYE I IR+ ++ R +V LT ++ ++ CL GM+ + K
Sbjct: 658 VVFMDICTPGVDGYELAIRIREKFAKCHERPF-MVVLTGNSDKVTKESCLRAGMDGLILK 716
Query: 1151 PIDSERMVSTILRLTK 1166
P+ ++M S + L +
Sbjct: 717 PVSIDKMRSVLSELIE 732
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 37/257 (14%)
Query: 499 LANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVE 558
L+ MSH++RTPM+ IIG+ ++L D L+ Q+ + IK SS LL ++N ILD+SK+E
Sbjct: 835 LSMMSHDIRTPMSNIIGMADLLL-DTSLSQHQHHYLEIIKNSSNTLLTIINDILDISKIE 893
Query: 559 SGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSN 618
+GK++++ FD + ++V+ + + + +E + + IP + G R+ QI +N
Sbjct: 894 AGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKIPNILIGPSSRLNQILTN 953
Query: 619 LINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFRED 678
L+ NS+KFT G I I C +N D
Sbjct: 954 LLGNSLKFTDKGEISI--CC---------------------------------LLNDETD 978
Query: 679 NKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVN-KMGGE 737
++ + +V DTG GI + +F++F Q + + TR++GG+GLGL+I + LV+ GE
Sbjct: 979 SEYEIKVDVRDTGIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAICKELVHLAFNGE 1038
Query: 738 IKVVKKNSPGTLMQLYL 754
I V + G+ L
Sbjct: 1039 ISVESQYGHGSTFTCIL 1055
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 22/146 (15%)
Query: 1023 RILLAEDTPL-IQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1081
++L+ +D + IQI++ K+L+ VG V V G A+ +N+ + +S
Sbjct: 1570 KVLVVDDNHINIQILS-KMLQTVGCEVDSVLSGADALAKINQS-SGDS------------ 1615
Query: 1082 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLG 1141
+D I +D QMP MDG++ + +IR+ E + + I+A TA+ D+ KC
Sbjct: 1616 -------YDAIFLDIQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFD 1668
Query: 1142 VGMNAYLTKPIDSERMVSTILRLTKN 1167
GM+ +++KPI + I + KN
Sbjct: 1669 AGMDDFISKPIKRAEIKEIIKKYGKN 1694
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2
SV=1
Length = 740
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 125/255 (49%), Gaps = 22/255 (8%)
Query: 484 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 543
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 544 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 603
L L+N +LDLS++E G ++L+ F+L +E++++ + L L ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGPDLPV 451
Query: 604 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 663
GD R+ Q N++ N++KF+ G I I +T FR
Sbjct: 452 FAVGDEKRLMQAILNVVGNAVKFSKEGSISISAIVAKSET-----------------FR- 493
Query: 664 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 723
+ + + D+ L +V DTG GI +F F Q R GG+GLG
Sbjct: 494 --EIRVPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTTVG-PRNSGGSGLG 550
Query: 724 LSIVRTLVNKMGGEI 738
L+I + VN M G I
Sbjct: 551 LAICKRFVNLMEGHI 565
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 1091 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1150
++ MD P +DGYE I IR+ ++ R +V LT ++ ++ CL GM+ + K
Sbjct: 658 VVFMDICTPGVDGYELAIRIREKFAKCHERPF-MVVLTGNSDKVTKESCLRAGMDGLILK 716
Query: 1151 PIDSERMVSTILRLTK 1166
P+ ++M S + L +
Sbjct: 717 PVSIDKMRSVLSELIE 732
>sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase D OS=Dictyostelium
discoideum GN=dhkD PE=2 SV=1
Length = 1546
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 133/270 (49%), Gaps = 35/270 (12%)
Query: 487 KAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLR 546
K + + K+QF AN+SHELRTP+A I+G + L D+ + + + +++ LL+
Sbjct: 204 KIKELDELKTQFFANVSHELRTPLALIVGPTDKLLKDENVDINVRKDLEIVARNARGLLK 263
Query: 547 LLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVR 606
++N +LD+S++E+GKM L + +L + + + F + +++ + ++ + P
Sbjct: 264 IVNNLLDISRLEAGKMNLNYSMVNLGQTVHLIASCFEILAREKSLDFSI-ITPSEPMMAA 322
Query: 607 GDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLK 666
D ++ ++ +NLI+N+ KFT SG ++ E D S N F
Sbjct: 323 IDADKMQRVITNLISNAFKFTPSGG-AVKCILEKFDLSPNKPGFQ--------------- 366
Query: 667 QQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSI 726
V DTG GI + E +FE F Q D S+TRKHGGTGLGLSI
Sbjct: 367 ------------------IVVSDTGPGIPDNLHEIIFERFRQVDGSSTRKHGGTGLGLSI 408
Query: 727 VRTLVNKMGGEIKVVKKNSPGTLMQLYLLL 756
V+ V GG + + ++ G L L L
Sbjct: 409 VKEFVTLHGGTVTIHNISTGGAQFTLRLPL 438
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 137/297 (46%), Gaps = 38/297 (12%)
Query: 464 LTNGVSKEMKLRAELISHLDARRKA-EASNNYKSQFLANMSHELRTPMAAIIGLLEIL-- 520
L N ++ + + L+ L+ R +N K +F N+SHELRTP+ I+G ++L
Sbjct: 709 LINQLTNKKRDLQTLVGELEKERNLLNNTNKSKDEFFMNLSHELRTPLNGILGWCQLLLY 768
Query: 521 ------------KSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTE 568
S + + + I++ + + +L+N +LD+S + K L +
Sbjct: 769 DIDSGGSSGGGSGSISGDDSTVRTGLETIERCASSQNQLINDLLDMSLIIGDKFSLILGD 828
Query: 569 FDLQKELEE-----LVDMFSVQCSNH-NVETVLDLSDNIPRNVRGDPGRVFQIFSNLINN 622
DL +E LV S + S H N++ + +I RN+ GD R+ Q+ NL++N
Sbjct: 829 VDLPILIENAISSILVTAQSKKISVHSNIQGEGEEESSILRNIVGDKARLQQVIWNLLSN 888
Query: 623 SIKFTSS-GHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKL 681
SIKFT G I + N S+ F ++ N +N D
Sbjct: 889 SIKFTKEKGRIHLNLKVVNQIPSREVLGFCSN--------------PMFNTINRHGDR-- 932
Query: 682 ALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEI 738
+ F + D G GI + +VF+ F+Q D S+TR +GG G+GLSI + +++ G +
Sbjct: 933 WILFTITDNGKGIPKQFLPSVFDRFKQADCSSTRSYGGLGIGLSITQNIIHLHKGAV 989
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 27/141 (19%)
Query: 1024 ILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSET 1083
+L+ ED P + ++L K V+ DG++ +E + R++
Sbjct: 572 VLVVEDNPEMNRFIAELLSKYYFVVTAF-DGVEGIE-----------KTRAI-------- 611
Query: 1084 PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVG 1143
TP DLI+ DC MP+M G E ++R S+ NIPI+ LTA A K L G
Sbjct: 612 --TP--DLIVTDCMMPRMSGDEMVEQLR---SDEQFDNIPILLLTAKADENLRIKLLQNG 664
Query: 1144 MNAYLTKPIDSERMVSTILRL 1164
++ Y+ KP SE +V+ ++ L
Sbjct: 665 VSDYVNKPFSSEELVARVVNL 685
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 1005 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 1064
P S +++ K +L G++I+L +D + +L K+GA D Q V
Sbjct: 1341 PNLRSPKANSNKNLLGGIQIMLVDDLEETTHLFSSMLYKLGAKRI---DTFQRVSDAYAF 1397
Query: 1065 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGA-RNIP 1123
L S P+ D+IL D MP DGY ++R E + + P
Sbjct: 1398 LCDSSK----------------PQPDIILSDLTMPFEDGYSMVRKLRDREKINTQNKKTP 1441
Query: 1124 IVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL 1164
I+ALTA ++D++K L G + + +KP++ + ++IL L
Sbjct: 1442 IIALTASVSSSDKEKVLKSGFDLHCSKPVNFLELSNSILTL 1482
>sp|P58363|ARCB_ECO57 Aerobic respiration control sensor protein ArcB OS=Escherichia coli
O157:H7 GN=arcB PE=3 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 145/310 (46%), Gaps = 57/310 (18%)
Query: 489 EASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLL 548
E ++ K+ F++ +SHELRTP+ I+GL IL D +LT EQ + I S+ L +
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRIL-LDTELTAEQEKYLKTIHVSAVTLGNIF 335
Query: 549 NRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGD 608
N I+D+ K+E K++L+N D L +L ++ ++Q + L+ + +P V D
Sbjct: 336 NDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITD 395
Query: 609 PGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQ 668
R+ QI NLI+N++KFT G + +R
Sbjct: 396 GTRLRQILWNLISNAVKFTQQGQVTVR--------------------------------- 422
Query: 669 ANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQ------GDPSTTRKHGGTGL 722
R D L FEV+D+G GI Q + + +F + Q G P+T GTG+
Sbjct: 423 ------VRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPAT-----GTGI 471
Query: 723 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDA----DFPNTVVVLA 778
GL++ R L MGG+I V + G+ L + A S ++++ DA D P + +
Sbjct: 472 GLAVSRRLAKNMGGDITVTSEQGKGS--TFTLTIHAPSVAEEVDDAFDEDDMPLPALNVL 529
Query: 779 TVGSMERMII 788
V +E +I
Sbjct: 530 LVEDIELNVI 539
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 1019 LEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQG 1078
L L +LL ED L IVA +LEK+G +V V G A+E
Sbjct: 523 LPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK---------------- 566
Query: 1079 SPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKK 1138
P E +DL+L+D Q+P M G + + E+ K P+VALTA+ + D+++
Sbjct: 567 -PGE------YDLVLLDIQLPDMTGLDISRELTKRYPREDLP--PLVALTANVLK-DKQE 616
Query: 1139 CLGVGMNAYLTKPIDSERMVSTILRLTKNMPSEATGTT 1176
L GM+ L+KP+ + + I + E + T
Sbjct: 617 YLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVT 654
>sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ArcB OS=Shigella
flexneri GN=arcB PE=3 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 145/310 (46%), Gaps = 57/310 (18%)
Query: 489 EASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLL 548
E ++ K+ F++ +SHELRTP+ I+GL IL D +LT EQ + I S+ L +
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRIL-LDTELTAEQEKYLKTIHVSAVTLGNIF 335
Query: 549 NRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGD 608
N I+D+ K+E K++L+N D L +L ++ ++Q + L+ + +P V D
Sbjct: 336 NDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITD 395
Query: 609 PGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQ 668
R+ QI NLI+N++KFT G + +R
Sbjct: 396 GTRLRQILWNLISNAVKFTQQGQVTVR--------------------------------- 422
Query: 669 ANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQ------GDPSTTRKHGGTGL 722
R D L FEV+D+G GI Q + + +F + Q G P+T GTG+
Sbjct: 423 ------VRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPAT-----GTGI 471
Query: 723 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDA----DFPNTVVVLA 778
GL++ R L MGG+I V + G+ L + A S ++++ DA D P + +
Sbjct: 472 GLAVSRRLAKNMGGDITVTSEQGKGS--TFTLTIHAPSVAEEVDDAFDEDDMPLPALNVL 529
Query: 779 TVGSMERMII 788
V +E +I
Sbjct: 530 LVEDIELNVI 539
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 1019 LEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQG 1078
L L +LL ED L IVA +LEK+G +V V G A+E
Sbjct: 523 LPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK---------------- 566
Query: 1079 SPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKK 1138
P E +DL+L+D Q+P M G + + E+ K P+VALTA+ + D+++
Sbjct: 567 -PGE------YDLVLLDIQLPDMTGLDISRELTKRYPREDLP--PLVALTANVLK-DKQE 616
Query: 1139 CLGVGMNAYLTKPIDSERMVSTILRLTKNMPSEATGTT 1176
L GM+ L+KP+ + + I + E + T
Sbjct: 617 YLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVT 654
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 414,335,376
Number of Sequences: 539616
Number of extensions: 17183471
Number of successful extensions: 48697
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 559
Number of HSP's that attempted gapping in prelim test: 47121
Number of HSP's gapped (non-prelim): 1351
length of query: 1177
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1048
effective length of database: 121,958,995
effective search space: 127813026760
effective search space used: 127813026760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)