Your job contains 1 sequence.
>001046
MDPPASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE
NGAEMPDYFVRTLLTIIHAILPPKSKSADKESKKEGGGDGKKTKFKALAIEDSRDKVKDL
ERELEAEARERRRGNEDREREDHYRNRDRDRDRQDRDRDRGRRDRDNQRGRHYVDDDDGG
DRSRGRYRDRHETARRYDNKYGDRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCF
VQLNDFRGKEGLVHVSQIATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTG
KDLLPLKKISEDDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWE
AKQLIASGVLSVEDYPMYDEEGDGLAYQEEGAEEELEIELNEDEPAFLQGQTRYSVDMSP
VKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHL
AQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQ
VLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEV
GYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLK
QLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLI
TVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQS
RIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQA
SAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLS
FDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCS
DEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWC
FENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQE
GYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK
VADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001046
(1176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 4365 0. 3
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 3315 0. 2
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 3284 0. 2
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 3281 0. 2
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 3280 0. 2
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 3280 0. 2
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 3280 0. 2
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 3280 0. 2
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 3279 0. 3
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 3233 0. 2
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 3167 0. 2
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 2975 0. 2
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 2971 0. 2
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 2826 0. 3
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 2920 8.5e-314 2
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 2920 8.5e-314 2
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 2858 1.9e-307 2
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 2682 5.7e-295 3
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 2590 1.1e-276 3
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 2590 1.1e-276 3
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 2194 6.8e-255 4
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 2139 5.6e-237 3
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 2043 5.0e-214 2
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 2031 2.1e-213 2
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 2013 4.0e-212 2
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 2009 1.1e-211 2
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 2009 1.1e-211 2
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 2011 1.3e-211 2
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 2008 1.3e-211 2
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 2007 1.7e-211 2
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 2006 2.9e-209 2
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 2006 3.6e-209 2
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 1920 1.3e-203 3
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 1920 1.3e-203 3
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 1953 1.9e-203 2
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 1921 3.4e-203 3
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 1929 3.1e-201 2
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 1913 1.3e-200 2
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 1863 7.3e-197 3
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 1856 6.5e-196 3
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 1867 2.3e-194 2
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 1861 3.0e-194 2
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 1860 3.8e-194 2
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 1826 5.1e-194 3
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 1855 1.3e-193 2
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 1862 3.6e-192 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 1842 3.9e-192 2
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 1860 5.9e-192 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 1819 6.4e-190 2
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 1819 6.4e-190 2
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 1802 8.2e-186 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 1799 1.7e-185 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 1774 7.6e-185 2
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 1728 1.0e-182 3
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 1748 2.6e-182 2
POMBASE|SPBC16H5.10c - symbol:prp43 "ATP-dependent RNA he... 1743 1.5e-179 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 1742 1.9e-179 1
ZFIN|ZDB-GENE-030131-650 - symbol:dhx15 "DEAH (Asp-Glu-Al... 1740 3.0e-179 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 1728 5.7e-178 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 1728 5.7e-178 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 1728 5.7e-178 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 1728 5.7e-178 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 1728 5.7e-178 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 1728 5.7e-178 1
ASPGD|ASPL0000059403 - symbol:AN0133 species:162425 "Emer... 1695 8.3e-177 2
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 1700 5.3e-175 1
CGD|CAL0000153 - symbol:orf19.1687 species:5476 "Candida ... 1695 1.8e-174 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 1676 1.8e-172 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 1676 1.8e-172 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 1660 9.1e-171 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 1305 1.0e-169 2
UNIPROTKB|G4NHA6 - symbol:MGG_03893 "Pre-mRNA-splicing fa... 1642 7.4e-169 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 1629 1.8e-167 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 1629 1.8e-167 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 1625 4.7e-167 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 1616 4.2e-166 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 1609 2.3e-165 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 1487 5.7e-165 2
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 1600 2.1e-164 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 1598 3.4e-164 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 1597 4.3e-164 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 1592 1.5e-163 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 1580 2.7e-162 1
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 995 1.4e-161 4
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 918 2.2e-161 2
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 918 2.2e-161 2
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 995 9.9e-161 4
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 1467 4.2e-160 2
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 1558 5.9e-160 1
UNIPROTKB|E2RQN1 - symbol:DHX35 "Uncharacterized protein"... 1547 8.6e-159 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 1438 4.8e-157 2
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 1084 4.8e-157 2
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 1468 1.9e-155 2
UNIPROTKB|H9KZI9 - symbol:LOC100858239 "Uncharacterized p... 1483 5.2e-152 1
POMBASE|SPAC2G11.11c - symbol:prh1 "ATP-dependent RNA hel... 1480 1.1e-151 1
ASPGD|ASPL0000052850 - symbol:AN1363 species:162425 "Emer... 1451 1.3e-148 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 1433 1.0e-146 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 1428 3.5e-146 1
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 1422 1.5e-145 1
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 1417 5.1e-145 1
WARNING: Descriptions of 249 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 4365 (1541.6 bits), Expect = 0., Sum P(3) = 0.
Identities = 848/984 (86%), Positives = 893/984 (90%)
Query: 195 RRYDNKYGDRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGKEGLVH 254
RR D + D ++ D+ G NEPELYQVYKGRV+RV+D GCFVQ + FRGKEGLVH
Sbjct: 190 RRRDRRAKDEYVEE--DKGG---ANEPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVH 244
Query: 255 VSQIATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKIS-EDD 313
VSQ+ATRR+ AK+ VKRD EVYVKVIS+S K SLSMRDVDQNTG+DL+PL+K S EDD
Sbjct: 245 VSQMATRRVDKAKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDD 304
Query: 314 ALGNNPS-GTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLSV 372
+ +NPS T+DG T+ G+SGIRIVEE+ V PSRRPLK+MSSPE+WEAKQLIASGVL V
Sbjct: 305 SSRSNPSYRTKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRV 364
Query: 373 EDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXXX 432
+++PMYDE+GDG FLQGQTRYSVDMSPVKIFKNPEG
Sbjct: 365 DEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLS 424
Query: 433 XXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 492
K TMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY
Sbjct: 425 RAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 484
Query: 493 DMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 552
DMPEWKKDAFGK TFGQRSKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGK
Sbjct: 485 DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGK 544
Query: 553 TTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 612
TTQVTQYLAEAGYTT+GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 545 TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 604
Query: 613 DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLI 672
DTVIKYMTDGMLLREILID+NLSQYSVIMLDEAHERTIHTDVLFGLLK+L+KRR DLRLI
Sbjct: 605 DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLI 664
Query: 673 VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG 732
VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEG
Sbjct: 665 VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 724
Query: 733 DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRK 792
DIL+FLTGQEEID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP PPGKRK
Sbjct: 725 DILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRK 784
Query: 793 VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 852
VVVATNIAEASLTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRT
Sbjct: 785 VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 844
Query: 853 GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQAL 912
GPGKCYRLYTESAYRNEM PTSIPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQAL
Sbjct: 845 GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQAL 904
Query: 913 ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 972
ISAMEQLYSLGALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQT
Sbjct: 905 ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT 964
Query: 973 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1032
GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRR
Sbjct: 965 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRR 1024
Query: 1033 AQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1092
AQDVRKQLLSIMDKYKLDV++AGKNFTKIRKAITAGFFFH ARKDPQEGYRTLVENQPVY
Sbjct: 1025 AQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVY 1084
Query: 1093 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
IHPSSALFQRQPDWVIYH+LVMTTKEYMREVTVIDPKWLV+LAPRFFKV+DPTKMSKRKR
Sbjct: 1085 IHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKR 1144
Query: 1153 QERIEPLYDRYHEPNSWRLSKRRA 1176
QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1145 QERIEPLYDRYHEPNSWRLSKRRA 1168
Score = 400 (145.9 bits), Expect = 3.2e-57, Sum P(2) = 3.2e-57
Identities = 80/124 (64%), Positives = 96/124 (77%)
Query: 198 DNKYGDRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGKEGLVHVSQ 257
+++ DR D + NEPELYQVYKGRV+RV+D GCFVQ + FRGKEGLVHVSQ
Sbjct: 188 EDRRRDRRAKDEYVEEDKGGANEPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQ 247
Query: 258 IATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKIS-EDDALG 316
+ATRR+ AK+ VKRD EVYVKVIS+S K SLSMRDVDQNTG+DL+PL+K S EDD+
Sbjct: 248 MATRRVDKAKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSR 307
Query: 317 NNPS 320
+NPS
Sbjct: 308 SNPS 311
Score = 281 (104.0 bits), Expect = 0., Sum P(3) = 0.
Identities = 62/109 (56%), Positives = 71/109 (65%)
Query: 10 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYF 69
L KL + SLVS VC+ELETHLG +KVLAEFI +LGR+ ETVDEFD LKE GAEMPDYF
Sbjct: 6 LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65
Query: 70 VRTLLTIIHAILPPXXXXXXXXXXXXXXXXXXXXXXXXLAIEDSRDKVK 118
VR+LLT IH I PP LAI+D++DKVK
Sbjct: 66 VRSLLTTIHGIYPPKPKSEKKKEEGDDQKFKG------LAIKDTKDKVK 108
Score = 38 (18.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 192 ETARRYDNKYGDRENDDSGDRSGRYRGNE 220
E RR +++ DR+ +SG R R +
Sbjct: 119 EERRREEDRNRDRDRRESGRDRDRDRNRD 147
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 3315 (1172.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 639/983 (65%), Positives = 772/983 (78%)
Query: 203 DRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGLVHVSQIATR 261
DR+ + R R EP LY++Y G+VS + D GCFV L G+ +GLVH+SQI +
Sbjct: 183 DRDREQQNKR--REIDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSG 240
Query: 262 R--IGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNNP 319
R + + DVVKR+Q+V VK++SV+ K+SLSM+DVDQ+TG+DL P + I + N
Sbjct: 241 RTKLNHPSDVVKRNQQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQS--IISTNS 298
Query: 320 SGTRDGP----TTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLSVEDY 375
+ R P S ++D + + KR++SP++W KQLIASG+LSV +
Sbjct: 299 TNNRSNPFKPNNNNNNSSNNNNNDDDDKYTTSKNRKRIASPDRWGYKQLIASGILSVPEM 358
Query: 376 PMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVD-MSPVKIFKNPEGXXXXX 434
P YD+E FL+G TR ++ +SP+KI K P G
Sbjct: 359 PNYDKEVGLVNHDEEQPEEDFDIERNEDEPQFLKG-TRMNMQQLSPIKIVKKPNGSLQRA 417
Query: 435 XXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD- 493
K M+DSIPKDL+ PW DPMPE GERHLAQE+R + D
Sbjct: 418 ASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDT 477
Query: 494 -MPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 552
+PEWKK G + +G+ + SI+EQR+SLPI+ L++ +QAV ++Q+LVVIGETGSGK
Sbjct: 478 EIPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGK 537
Query: 553 TTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 612
TTQ+ QYLAEAGY TRGKIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT P
Sbjct: 538 TTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSP 597
Query: 613 DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLI 672
+T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI TDVLFGLLKQ ++RRP+L+++
Sbjct: 598 ETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVL 657
Query: 673 VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG 732
+TSATL+AEKFS YF N +F IPGRTFPV+I YTK PE+DYLDASLITV+QIHL+EP G
Sbjct: 658 ITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPG 717
Query: 733 DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRK 792
DILLFLTGQEEID ACQ LYERMK LG NVP+LIILPVYSALPSEMQ++IF+PAPPG RK
Sbjct: 718 DILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRK 777
Query: 793 VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 852
VV+ATNIAE SLTIDGI+YVIDPGF+KQ +NPK G+DSLV+ PISQA+A+QR+GRAGRT
Sbjct: 778 VVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRT 837
Query: 853 GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQAL 912
GPGKCYRLYTESA++NEM +SIPEIQR NLG T LTMKAMGINDLL+FDFMDPP Q L
Sbjct: 838 GPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTL 897
Query: 913 ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 972
+SAMEQLYSLGALDEEGLLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+
Sbjct: 898 VSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSV 957
Query: 973 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1032
N+FYRP+EKQA ADQK+AKFFQPEGDHLTLL VYE+WK FS PWCFENFVQ+RSLRR
Sbjct: 958 QNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRR 1017
Query: 1033 AQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1092
AQDVRKQL++IMD+YKLD++SAG+N+TKI+KAI +GFF +A++KDP EGY+TLVE QPVY
Sbjct: 1018 AQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVY 1077
Query: 1093 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
IHPSS LF R PDWVIYHELVMTTKEYMREV IDPKWLV+LAP+FFK +DP K+SKRKR
Sbjct: 1078 IHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKR 1137
Query: 1153 QERIEPLYDRYHEPNSWRLSKRR 1175
+E+IEPLYD+Y++PN+WR SKR+
Sbjct: 1138 KEKIEPLYDKYNDPNAWRPSKRK 1160
Score = 117 (46.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 25/68 (36%), Positives = 38/68 (55%)
Query: 10 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYF 69
+ KLE L S+VC+ELE +G GDK+LAEF+ L + +F+ + EN + P+
Sbjct: 1 MDKLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESL 60
Query: 70 VRTLLTII 77
L +I
Sbjct: 61 SSHLFNLI 68
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 3284 (1161.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 628/984 (63%), Positives = 770/984 (78%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ +KYGDR D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 245 RKDRDKYGDRNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 304
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 305 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 364
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 365 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 422
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 423 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 482
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 483 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 542
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 543 NDIPEWKKHAFGGNKA-SYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 601
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 602 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 661
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 662 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 721
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 722 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 781
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 782 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 841
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 842 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 901
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 902 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 961
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 962 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1021
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1022 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1081
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1082 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1141
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1142 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1201
Query: 1150 RKRQERIEPLYDRYHEPNSWRLSK 1173
+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1202 QKKQQRLEPLYNRYEEPNAWRISR 1225
Score = 189 (71.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 40/80 (50%), Positives = 49/80 (61%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
PA + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 30 PAEE--LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 87
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 88 EFTDSLISNLLRLIQTMRPP 107
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 3281 (1160.0 bits), Expect = 0., Sum P(2) = 0.
Identities = 627/984 (63%), Positives = 770/984 (78%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ +KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 235 RKDRDKYGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 294
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 295 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 354
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 355 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 412
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 413 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 472
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 473 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 532
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 533 NDIPEWKKHAFGGNKA-SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 591
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 592 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 651
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 652 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 711
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 712 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 771
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 772 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 831
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 832 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 891
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 892 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 951
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 952 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1011
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1012 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1071
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1131
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1132 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1191
Query: 1150 RKRQERIEPLYDRYHEPNSWRLSK 1173
+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1192 QKKQQRLEPLYNRYEEPNAWRISR 1215
Score = 191 (72.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 76 EFTDSLISNLLRLIQTMRPP 95
Score = 46 (21.3 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 25/98 (25%), Positives = 35/98 (35%)
Query: 1078 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPR 1137
P+ L E PV P + + D + V + ++E+ + P R
Sbjct: 108 PKTEKEKLKELFPVLCQPDNPSVRTMLD----EDDVKVAVDVLKELEALMPSAAGQEKQR 163
Query: 1138 FFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
+ D TK KR R DR E N R KRR
Sbjct: 164 DAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRR 201
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 3280 (1159.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 627/984 (63%), Positives = 769/984 (78%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 259 RKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 318
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 319 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 378
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 379 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 436
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 437 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 496
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 497 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 556
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 557 NDIPEWKKHAFGGNKA-SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 615
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 616 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 675
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 676 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 735
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 736 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 795
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 796 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 855
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 856 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 915
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 916 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 975
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 976 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1035
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1036 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1095
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1096 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1155
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1156 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1215
Query: 1150 RKRQERIEPLYDRYHEPNSWRLSK 1173
+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1216 QKKQQRLEPLYNRYEEPNAWRISR 1239
Score = 191 (72.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 76 EFTDSLISNLLRLIQTMRPP 95
Score = 40 (19.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 610 TGPDTVIKYMTDGMLLRE---ILID-DNLSQYSVIMLDEAHERTIHTDVL 655
T D V+K T+ LRE +L DN S + MLDE + + DVL
Sbjct: 100 TSKDPVVKPKTEKEKLRELFPVLCQPDNPSART--MLDEEDVK-VAVDVL 146
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 3280 (1159.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 627/984 (63%), Positives = 769/984 (78%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 257 RKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 316
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 317 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 376
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 377 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 434
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 435 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 494
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 495 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 554
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 555 NDIPEWKKHAFGGNKA-SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 613
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 614 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 673
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 674 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 733
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 734 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 793
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 794 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 853
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 854 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 913
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 914 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 973
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 974 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1033
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1034 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1093
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1094 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1153
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1154 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1213
Query: 1150 RKRQERIEPLYDRYHEPNSWRLSK 1173
+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1214 QKKQQRLEPLYNRYEEPNAWRISR 1237
Score = 191 (72.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 76 EFTDSLISNLLRLIQTMRPP 95
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 3280 (1159.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 627/984 (63%), Positives = 770/984 (78%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ +KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 231 RKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 290
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 291 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 350
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 351 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 408
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 409 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 468
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 469 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 528
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 529 NDIPEWKKHAFGGNKA-SYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 587
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 588 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 647
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 648 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 707
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 708 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 767
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 768 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 827
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 828 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 887
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 888 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 947
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 948 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1007
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1008 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1067
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1068 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1127
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1128 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1187
Query: 1150 RKRQERIEPLYDRYHEPNSWRLSK 1173
+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1188 QKKQQRLEPLYNRYEEPNAWRISR 1211
Score = 189 (71.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 40/80 (50%), Positives = 49/80 (61%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
PA + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 18 PAEE--LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 76 EFTDSLISNLLRLIQTMRPP 95
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 3280 (1159.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 627/984 (63%), Positives = 770/984 (78%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ +KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 227 RKDRDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 286
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 287 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 346
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 347 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 404
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 405 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 464
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 465 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 524
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 525 NDIPEWKKHAFGGNKA-SYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 583
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 584 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 643
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 644 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 703
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 704 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 763
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 764 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 823
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 824 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 883
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 884 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 943
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 944 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1003
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1004 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1063
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1064 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1123
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1124 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1183
Query: 1150 RKRQERIEPLYDRYHEPNSWRLSK 1173
+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1184 QKKQQRLEPLYNRYEEPNAWRISR 1207
Score = 189 (71.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 40/80 (50%), Positives = 49/80 (61%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
PA + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 18 PAEE--LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 76 EFTDSLISNLLRLIQTMRPP 95
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 3279 (1159.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 632/986 (64%), Positives = 771/986 (78%)
Query: 194 ARRYDNKYGDRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
AR +K DR D DR EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 228 ARTDRDKGSDRWKDKHVDRPPP---EEPSVADIYNGKVTSIMQFGCFVQLEGLRKRWEGL 284
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ+TG+DL P ++ +
Sbjct: 285 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNV 344
Query: 312 DDALGNNPSGTR--DGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGV 369
G S R D PT + L VE+D + R+ L ++S PEKWE KQ+IA+ V
Sbjct: 345 GGE-GQEESAMRNPDRPTN-LNLGHAPEVEDDTL--ERKRLTKISDPEKWEIKQMIAANV 400
Query: 370 LSVEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEG 429
LS E++P +DEE FL+G T+ S+DMSPVKI KNP+G
Sbjct: 401 LSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDG 460
Query: 430 XXXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGL 489
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 461 SLSQAAMMQSALAKERREVKQAQREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGM 520
Query: 490 SAYDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 547
D+PEWKK AFG KA ++G++++LSI EQR+SLPIYKLK++LIQAVHDNQ+L+VIGE
Sbjct: 521 MPNDIPEWKKHAFGGNKA-SYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGE 579
Query: 548 TGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 607
TGSGKTTQ+TQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRV+EE+GC LG+EVGY IRFE
Sbjct: 580 TGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFE 639
Query: 608 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP 667
DCT P+TVIKYMTDGMLLRE LID +L QY++IMLDEAHERTIHTDVLFGLLK+ V++R
Sbjct: 640 DCTSPETVIKYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRT 699
Query: 668 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHL 727
D++LIVTSATLDA KFS YF+ IFTIPGRT+PVE+LYTK+PE+DYLDASLITV+QIHL
Sbjct: 700 DMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHL 759
Query: 728 TEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP 787
TEP GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAP
Sbjct: 760 TEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP 819
Query: 788 PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 847
PG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAG
Sbjct: 820 PGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAG 879
Query: 848 RAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPP 907
RAGRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 880 RAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAP 939
Query: 908 SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 967
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI+
Sbjct: 940 PMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIV 999
Query: 968 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1027
+M+ N+FYRP++KQA ADQK+AKF QPEGDHLTLLAVY +WK FS PWC+ENF+Q+
Sbjct: 1000 SMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQA 1059
Query: 1028 RSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVE 1087
RSLRRAQD+RKQ+L IMD++KLDV+S GK +++KAI +GFF +AA+KDPQEGYRTL++
Sbjct: 1060 RSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLID 1119
Query: 1088 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKM 1147
Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPT++
Sbjct: 1120 QQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRL 1179
Query: 1148 SKRKRQERIEPLYDRYHEPNSWRLSK 1173
SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1180 SKQKKQQRLEPLYNRYEEPNAWRISR 1205
Score = 191 (72.3 bits), Expect = 0., Sum P(3) = 0.
Identities = 39/77 (50%), Positives = 48/77 (62%)
Query: 7 DDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMP 66
+D LKKLEY SLVSKVC+EL+ HLG DK LAEF+ L D F S L +NGA+
Sbjct: 6 EDELKKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTAFDGFKSALVKNGADFT 65
Query: 67 DYFVRTLLTIIHAILPP 83
D + LL +I + PP
Sbjct: 66 DSLIGNLLRLIQTMRPP 82
Score = 38 (18.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 203 DRENDDSGDRSGRYR 217
DRE D DR R+R
Sbjct: 183 DRERDRDRDRRRRHR 197
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 3233 (1143.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 624/988 (63%), Positives = 764/988 (77%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 204 RKDREKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 263
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 264 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 323
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 324 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 381
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 382 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 441
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 442 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 501
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 502 NDIPEWKKHAFGGNKA-SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 560
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 561 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 620
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 621 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 680
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 681 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 740
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 741 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 800
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 801 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 860
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 861 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 920
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 921 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 980
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 981 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1040
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1041 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1100
Query: 1090 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ AP FFKV+DPTK+SK
Sbjct: 1101 VVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSK 1160
Query: 1150 RKRQERIEPLYDR-------YHEPNSWR 1170
+K+Q+R+EPLY+R Y E SW+
Sbjct: 1161 QKKQQRLEPLYNRGEGMRVLYTELRSWK 1188
Score = 160 (61.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 33/61 (54%), Positives = 39/61 (63%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 E 64
E
Sbjct: 76 E 76
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 3167 (1119.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 619/988 (62%), Positives = 757/988 (76%)
Query: 193 TARRYDNKYGDRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EG 251
T RR D + R+ + ++PE ++Y G+++ +V GCFVQL R + EG
Sbjct: 255 TERR-DRRDRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCFVQLFGLRKRWEG 313
Query: 252 LVHVSQI-ATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKIS 310
LVH+SQ+ A R+ + +VV R+Q V VKV+S++GQK+SLSM++VDQ++GKDL PL
Sbjct: 314 LVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQDSGKDLNPLSHAP 373
Query: 311 EDD-ALGN-NPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASG 368
EDD +L + NP G T+ + L G + ++ SR+ + R+SSPE+WE KQ+I+SG
Sbjct: 374 EDDESLRDRNPDGPFSSSTSMLNLQGNGMEGDEH--ESRKRVTRISSPERWEIKQMISSG 431
Query: 369 VLSVEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPE 428
VL + P +DEE G FL G R D+SPV+I KNP+
Sbjct: 432 VLDRSEMPDFDEE-TGLLPKDEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPD 490
Query: 429 GXXXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVG 488
G K ++++P LN+ W DP+PE R LA +RG+
Sbjct: 491 GSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMA 550
Query: 489 LSAYDMPEWKKDAFG-KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 547
+ ++PEWKK G K +FG+++ L++ EQRQSLPIYKL+ +LI+AV DNQ+L+VIGE
Sbjct: 551 AAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGE 610
Query: 548 TGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 607
TGSGKTTQ+TQYL E G+T RGKIGCTQPRRVAAMSVAKRVAEE+GCRLG+EVGY IRFE
Sbjct: 611 TGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFE 670
Query: 608 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP 667
DCT P+T+IKYMTDGMLLRE L++ L YSVIMLDEAHERTIHTDVLFGLLK V++RP
Sbjct: 671 DCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRP 730
Query: 668 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHL 727
+L+LIVTSATLDA KFS YFF IFTIPGRTFPVE+LYTK+PE+DYLDASLITV+QIHL
Sbjct: 731 ELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHL 790
Query: 728 TEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP 787
EP GDILLFLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAP
Sbjct: 791 REPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP 850
Query: 788 PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 847
G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN K G+DSLV+TPISQA+AKQRAG
Sbjct: 851 AGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAG 910
Query: 848 RAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPP 907
RAGRTGPGK YRLYTE AYR+EM PT +PEIQR NL T L +K MGINDLL FDFMD P
Sbjct: 911 RAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAP 970
Query: 908 SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 967
++L+ A+EQL+SL ALD+EGLLT+LGR+MAEFPL+P LSKML+ SV L CSDEILTI+
Sbjct: 971 PVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIV 1030
Query: 968 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1027
+M+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS WC+ENFVQ
Sbjct: 1031 SMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQI 1090
Query: 1028 RSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVE 1087
R+L+R+QDVRKQLL IMD++KLDV+SAGKN +I+KAI +GFF +AA+KDPQEGYRTLV+
Sbjct: 1091 RTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVD 1150
Query: 1088 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKM 1147
+Q VYIHPSSALF RQP+WVIYHELV TTKEYMREVT IDPKWLV+ AP FF+ +DPTK+
Sbjct: 1151 SQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPSFFRFSDPTKL 1210
Query: 1148 SKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
SK K+ +R+EPLY++Y EPN+WR+S+ R
Sbjct: 1211 SKFKKNQRLEPLYNKYEEPNAWRISRVR 1238
Score = 192 (72.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 40/75 (53%), Positives = 49/75 (65%)
Query: 8 DGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPD 67
D L+KLEY SLVSK+C+EL+ HLG DK LAEFI +L T D F L +NGAE PD
Sbjct: 2 DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPD 61
Query: 68 YFVRTLLTIIHAILP 82
V+ L II+ + P
Sbjct: 62 SLVQNLQRIINLMRP 76
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 2975 (1052.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 577/916 (62%), Positives = 706/916 (77%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R+ +KYG+R D D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 235 RKDRDKYGERNLDRWRDKHVDRPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 294
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ TG+DL P ++ +
Sbjct: 295 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNL 354
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S T + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 355 VGETNEETSMRNPDRPTHLSLVSAPEVEDDSL--ERKRLTRISDPEKWEIKQMIAANVLS 412
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 413 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 472
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN+ W DP+P+ R +A +RG+G+
Sbjct: 473 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMP 532
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G+++++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETG
Sbjct: 533 NDIPEWKKHAFGGNKA-SYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETG 591
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 592 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 651
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 652 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 711
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 712 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 771
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIFDPAPPG
Sbjct: 772 PPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPG 831
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRA
Sbjct: 832 SRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRA 891
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGINDLLSFDFMD P
Sbjct: 892 GRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPM 951
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M
Sbjct: 952 ETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSM 1011
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK FS PWC+ENF+Q+RS
Sbjct: 1012 LSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARS 1071
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
LRRAQD+RKQ+L IMD++KLDV+S GK+ +++KAI +GFF +AA+KDPQEGYRTL++ Q
Sbjct: 1072 LRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQ 1131
Query: 1090 PVYIHPSSALFQRQPD 1105
VYIHPSSALF RQP+
Sbjct: 1132 VVYIHPSSALFNRQPE 1147
Score = 191 (72.3 bits), Expect = 0., Sum P(2) = 0.
Identities = 39/80 (48%), Positives = 48/80 (60%)
Query: 4 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63
P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGA
Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGA 75
Query: 64 EMPDYFVRTLLTIIHAILPP 83
E D + LL +I + PP
Sbjct: 76 EFTDSLISNLLRLIQTMRPP 95
Score = 46 (21.3 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 25/98 (25%), Positives = 35/98 (35%)
Query: 1078 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPR 1137
P+ L E PV P + + D + V + ++E+ + P R
Sbjct: 108 PKTEKEKLKELFPVLCQPDNPSVRTMLD----EDDVKVAVDVLKELEALMPSAAGQEKQR 163
Query: 1138 FFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
+ D TK KR R DR E N R KRR
Sbjct: 164 DAEHRDRTKKKKRSRSRDRNRDRDRDRERNRDRDHKRR 201
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 2971 (1050.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 577/969 (59%), Positives = 728/969 (75%)
Query: 219 NEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGLVHVSQIAT-RRIGNAKDVVKRDQEV 276
+ P LY++Y GRV+ V D G FV L RGK +GLVHVS + R+ + D+V R Q V
Sbjct: 269 DSPVLYKIYDGRVTGVKDFGAFVNLVGVRGKVDGLVHVSAMQEGTRVNHPSDLVSRGQPV 328
Query: 277 YVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISED---DALGNNPSGTRDGPTTRMGLS 333
VKVIS+ G ++ LSM++VDQ TG+DL+P K+++ + L PS R G + +
Sbjct: 329 KVKVISIQGSRIGLSMKEVDQETGQDLVPQKRLASGANMERLDGMPSDDRYGNLS----A 384
Query: 334 GIRIVEE-DGVVPSRRPLKRMSSPEKWEAKQLIASGVLSVEDYPMYDEEGDGXXXXXXXX 392
+ ++EE DG S + KR++SPE+WE KQLIASG +S DYP DEE
Sbjct: 385 DVPVIEESDG--RSMKNRKRLTSPERWEIKQLIASGAVSAADYPDIDEEYHATLTGEGTF 442
Query: 393 XXXXXXXXXXXXX--XFLQGQTRYSVDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXXX 450
FL GQT+ S+++SP+++ K P+G K
Sbjct: 443 EEEEDIDIEVRDEEPAFLAGQTKMSLELSPIRVVKAPDGSMNRSAMAGTNLAKERRELRQ 502
Query: 451 XXXXTML--DSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD--MPEWKKDAFGKAL 506
+ DLN W+DPM ER A +LR + D +PEWK+ GK
Sbjct: 503 QEAQDKAAEQAAGVDLNAQWQDPM--ASERKFAADLRSTQQTGTDEAVPEWKRVTMGKTP 560
Query: 507 TFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 566
+FG+R+ +SI++QR+SLP+YK +++L++AV +NQ+L+V+G+TGSGKTTQVTQYLAEAG+
Sbjct: 561 SFGKRTNMSIKQQRESLPVYKFRQQLLEAVAENQLLIVVGDTGSGKTTQVTQYLAEAGWA 620
Query: 567 TRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
+G IGCTQPRRVAAMSVAKRVAEE GC+LG EVGY IRFEDCT P+T IKYMTDGML R
Sbjct: 621 NKGIIGCTQPRRVAAMSVAKRVAEEVGCKLGAEVGYTIRFEDCTSPETKIKYMTDGMLQR 680
Query: 627 EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
E+L+D +L +YSVIMLDEAHERTI TDVLFGLLK +KRRPDLRLIVTSATLDA+KFS Y
Sbjct: 681 EVLLDPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRRPDLRLIVTSATLDADKFSEY 740
Query: 687 FFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDF 746
F+ C IF+IPGRTFPVEI+Y+K+PESDYLDA+LITV+QIHLTEP GD+LLFLTGQEEID
Sbjct: 741 FYGCPIFSIPGRTFPVEIMYSKEPESDYLDAALITVMQIHLTEPPGDMLLFLTGQEEIDT 800
Query: 747 ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTI 806
AC+ LYERMK LG +VPEL+ILPVYSALPSEMQSRIFDPAPPG RKVV+ATNIAE S+TI
Sbjct: 801 ACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITI 860
Query: 807 DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 866
D I+YVIDPGF KQ Y+PK G+DSLV+TPISQA AKQRAGRAGRTGPGKC+RLYTE+AY
Sbjct: 861 DNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAY 920
Query: 867 RNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 926
++EM PT+IP+IQR NL T L +KAMGINDLL FDFMDPP +++A+E+LY+L ALD
Sbjct: 921 QSEMLPTTIPDIQRQNLSHTILMLKAMGINDLLHFDFMDPPPTNTMLTALEELYALSALD 980
Query: 927 EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQA 986
+EGLLT+LGRKMA+FP++P L+K+L+ASVD+GCS+E+L+I+AM+ ++FYRP+EKQ QA
Sbjct: 981 DEGLLTRLGRKMADFPMEPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQA 1040
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDK 1046
DQK+AKF P GDHLTLL VY AWK FS WC+ENF+Q+R +RRAQDVR+QLL IM +
Sbjct: 1041 DQKKAKFHDPHGDHLTLLNVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQR 1100
Query: 1047 YKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1106
Y ++S G+N TK+R+A+ GFF ++ARKDPQEGY+TLVE PVY+HPSSA+F + +
Sbjct: 1101 YHHKIVSCGRNTTKVRQALCTGFFRNSARKDPQEGYKTLVEGTPVYMHPSSAMFGKPAEH 1160
Query: 1107 VIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDRYHEP 1166
VIYH LV+TTKEYM T I+PKWLV+ AP FFKVA ++SKRK+ ERI+PL++R+
Sbjct: 1161 VIYHTLVLTTKEYMHCTTGIEPKWLVEAAPTFFKVAPTDRLSKRKKAERIQPLHNRFAGE 1220
Query: 1167 NSWRLSKRR 1175
+ WRLS +R
Sbjct: 1221 DDWRLSAQR 1229
Score = 134 (52.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 8 DGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEM 65
D L+ LE+ SL+S++ +EL+ HLG DKVLAE+I E C + EF S L+ G ++
Sbjct: 2 DDLQSLEHLSLISRITNELQNHLGVSDKVLAEYIIEQHLKCSSFAEFKSALEAMGGDL 59
Score = 45 (20.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1141 VADPTKMSKRKRQERIEPLYDRY 1163
+ + +SKRKR P YD Y
Sbjct: 172 ITESRPVSKRKRSRSRSPEYDDY 194
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 2826 (999.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 522/698 (74%), Positives = 622/698 (89%)
Query: 478 RHLAQELRGVGLSAYDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQA 535
R +A +RG+G+ D+PEWKK AFG KA ++G++++LSI EQR+SLPI++LK++LIQA
Sbjct: 467 RQIAANMRGIGMMPNDIPEWKKHAFGGNKA-SYGKKTQLSIIEQRESLPIFRLKEQLIQA 525
Query: 536 VHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCR 595
VHDNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC
Sbjct: 526 VHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCC 585
Query: 596 LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVL 655
LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVL
Sbjct: 586 LGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVL 645
Query: 656 FGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYL 715
FGLLK+ V++R D++LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYL
Sbjct: 646 FGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYL 705
Query: 716 DASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALP 775
DASLITV+QIHLTEP GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALP
Sbjct: 706 DASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALP 765
Query: 776 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 835
SEMQ+RIFDPAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+T
Sbjct: 766 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVT 825
Query: 836 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGI 895
PISQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM T++PEIQR NL T L++KAMGI
Sbjct: 826 PISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGI 885
Query: 896 NDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASV 955
NDLLSFDFMD P + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV
Sbjct: 886 NDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 945
Query: 956 DLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNF 1015
LGCS+E+LTI++M+ N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK F
Sbjct: 946 HLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKF 1005
Query: 1016 SGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAAR 1075
S PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDV+S GK +++KAI +GFF +AA+
Sbjct: 1006 SNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAK 1065
Query: 1076 KDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLA 1135
KDPQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLV+ A
Sbjct: 1066 KDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFA 1125
Query: 1136 PRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1173
P FFKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1126 PAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1163
Score = 288 (106.4 bits), Expect = 0., Sum P(3) = 0.
Identities = 68/173 (39%), Positives = 99/173 (57%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
RR +KY +R N+ D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 215 RRDRDKYLERSNERWRDKHVDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 274
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ+TG+DL P ++ +
Sbjct: 275 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNL 334
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQL 364
S + + L VE+D + R+ L R+S PEKWE KQ+
Sbjct: 335 VGETNEETSMRNPDRPSHLSLVNAPEVEDDTL--ERKRLTRISDPEKWEIKQV 385
Score = 185 (70.2 bits), Expect = 0., Sum P(3) = 0.
Identities = 39/79 (49%), Positives = 49/79 (62%)
Query: 5 ASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAE 64
A+ + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGAE
Sbjct: 10 AALEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKAVLIKNGAE 69
Query: 65 MPDYFVRTLLTIIHAILPP 83
D + LL +I + PP
Sbjct: 70 FTDSLISNLLRLIQTMRPP 88
Score = 41 (19.5 bits), Expect = 8.8e-314, Sum P(3) = 8.8e-314
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 209 SGDRSGRYRGNEPELYQVYKGRVSR 233
S DR G+ + ++ L + K R SR
Sbjct: 148 SADRQGKQKNSDHRLLRAKKKRRSR 172
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 2920 (1033.0 bits), Expect = 8.5e-314, Sum P(2) = 8.5e-314
Identities = 575/989 (58%), Positives = 721/989 (72%)
Query: 196 RYDNKYGDREND--DSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R D + DR+ D D D G + E+ ++Y GRV+ + G F+ L FR K EGL
Sbjct: 204 RGDRRGDDRQRDRRDRRDDGGARKSEVAEIGKIYDGRVNSIQSFGAFITLEGFRQKQEGL 263
Query: 253 VHVSQIATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISED 312
VH+SQI R+ DV+KR + V VKV + K+SLSM++VDQN+G+DL P +
Sbjct: 264 VHISQIRNERVQTVADVLKRGENVKVKVNKIENGKISLSMKEVDQNSGEDLNPRETDLNP 323
Query: 313 DALGNNPSGTRDGPTTRMG--LSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVL 370
DA+G P ++ M SG+ + + + R+S+PE+WE +Q+ +GVL
Sbjct: 324 DAIGVRPRTPPASTSSWMNPEASGVGQGPSTSIGGGKARV-RISTPERWELRQMQGAGVL 382
Query: 371 SVEDYPMYDEE-GDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEG 429
+ D P +DEE G FL+G + ++ PVK+ KNP+G
Sbjct: 383 TATDMPDFDEEMGVLRNYDDESDGEDIEIELVEDEPDFLRGYGKGGAEIEPVKVVKNPDG 442
Query: 430 XXXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDL--NRPWEDPMP-ETGERHLAQELRG 486
K K N DPM A E +
Sbjct: 443 SLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILDPMSGNQSTAWSADESKD 502
Query: 487 VGLSAYDMPEWKKD--AFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVV 544
+MPEW K A GKA T+G+R+ LS+ EQR+SLPI+ LKK L++A+ DNQ+LVV
Sbjct: 503 RNNKMKEMPEWLKHVTAGGKA-TYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVV 561
Query: 545 IGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
+GETGSGKTTQ+TQY EAG RGKIGCTQPRRVAAMSVAKRVAEE+GC+LG +VGY I
Sbjct: 562 VGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTI 621
Query: 605 RFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVK 664
RFEDCT DT+IKYMTDGMLLRE LID +LS YS+IMLDEAHERTIHTDVLFGLLK +
Sbjct: 622 RFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAAR 681
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQ 724
+RP+L+LI+TSATLD+ KFS YF IFTIPGRTFPVEILYT++PESDYL+A+ ITV+Q
Sbjct: 682 KRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQ 741
Query: 725 IHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFD 784
IHLTEP GD+L+FLTGQEEID +C+ LYERMK +G +VPELIILPVY ALPSEMQ+RIFD
Sbjct: 742 IHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFD 801
Query: 785 PAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQ 844
PAP GKRKVV+ATNIAE SLTIDGIFYV+DPGF KQ +YNPK G+DSLV+TPISQA+AKQ
Sbjct: 802 PAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQ 861
Query: 845 RAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFM 904
R+GRAGRTGPGKCYRLYTE A+R+EM PT +PEIQR NL T L +KAMGIN+L+ FDFM
Sbjct: 862 RSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFM 921
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
D P ++I+A+ L++L ALD +GLLTKLGR+MAEFPL+P LSK+L+ SVDLGCS+E+L
Sbjct: 922 DAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVL 981
Query: 965 TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1024
TI+AM+ NIFYRP+EKQ ADQK+AKF QPEGDHLTLLAVY +WK +FS PWCFENF
Sbjct: 982 TIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENF 1041
Query: 1025 VQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRT 1084
+Q RS++RAQD+RKQLL IMD++KL ++S G++ ++++KAI +GFF +AA++DPQEGYRT
Sbjct: 1042 IQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRT 1101
Query: 1085 LVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
L + Q VYIHPSSA FQ+QP+WV+YHELVMTTKEYMREVT IDPKWLV+ AP FFK+ D
Sbjct: 1102 LTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDS 1161
Query: 1145 TKMSKRKRQERIEPLYDRYHEPNSWRLSK 1173
TK+S KR ++I+PL+D+Y + N+WR+++
Sbjct: 1162 TKLSTFKRNQKIDPLFDKYADANAWRITR 1190
Score = 114 (45.2 bits), Expect = 8.5e-314, Sum P(2) = 8.5e-314
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 10 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA--EMPD 67
+ +LE+ SLVSKV SE+E H G +K +AEF+ L + T D+ L G + D
Sbjct: 1 MDQLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDD 60
Query: 68 YFVRTLLTIIHAI 80
T+L I+ ++
Sbjct: 61 SLTATILRIVQSM 73
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 2920 (1033.0 bits), Expect = 8.5e-314, Sum P(2) = 8.5e-314
Identities = 575/989 (58%), Positives = 721/989 (72%)
Query: 196 RYDNKYGDREND--DSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
R D + DR+ D D D G + E+ ++Y GRV+ + G F+ L FR K EGL
Sbjct: 204 RGDRRGDDRQRDRRDRRDDGGARKSEVAEIGKIYDGRVNSIQSFGAFITLEGFRQKQEGL 263
Query: 253 VHVSQIATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISED 312
VH+SQI R+ DV+KR + V VKV + K+SLSM++VDQN+G+DL P +
Sbjct: 264 VHISQIRNERVQTVADVLKRGENVKVKVNKIENGKISLSMKEVDQNSGEDLNPRETDLNP 323
Query: 313 DALGNNPSGTRDGPTTRMG--LSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVL 370
DA+G P ++ M SG+ + + + R+S+PE+WE +Q+ +GVL
Sbjct: 324 DAIGVRPRTPPASTSSWMNPEASGVGQGPSTSIGGGKARV-RISTPERWELRQMQGAGVL 382
Query: 371 SVEDYPMYDEE-GDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEG 429
+ D P +DEE G FL+G + ++ PVK+ KNP+G
Sbjct: 383 TATDMPDFDEEMGVLRNYDDESDGEDIEIELVEDEPDFLRGYGKGGAEIEPVKVVKNPDG 442
Query: 430 XXXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDL--NRPWEDPMP-ETGERHLAQELRG 486
K K N DPM A E +
Sbjct: 443 SLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILDPMSGNQSTAWSADESKD 502
Query: 487 VGLSAYDMPEWKKD--AFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVV 544
+MPEW K A GKA T+G+R+ LS+ EQR+SLPI+ LKK L++A+ DNQ+LVV
Sbjct: 503 RNNKMKEMPEWLKHVTAGGKA-TYGRRTNLSMVEQRESLPIFALKKNLMEAMIDNQILVV 561
Query: 545 IGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
+GETGSGKTTQ+TQY EAG RGKIGCTQPRRVAAMSVAKRVAEE+GC+LG +VGY I
Sbjct: 562 VGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKLGTDVGYTI 621
Query: 605 RFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVK 664
RFEDCT DT+IKYMTDGMLLRE LID +LS YS+IMLDEAHERTIHTDVLFGLLK +
Sbjct: 622 RFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLFGLLKAAAR 681
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQ 724
+RP+L+LI+TSATLD+ KFS YF IFTIPGRTFPVEILYT++PESDYL+A+ ITV+Q
Sbjct: 682 KRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLEAAHITVMQ 741
Query: 725 IHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFD 784
IHLTEP GD+L+FLTGQEEID +C+ LYERMK +G +VPELIILPVY ALPSEMQ+RIFD
Sbjct: 742 IHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFD 801
Query: 785 PAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQ 844
PAP GKRKVV+ATNIAE SLTIDGIFYV+DPGF KQ +YNPK G+DSLV+TPISQA+AKQ
Sbjct: 802 PAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQ 861
Query: 845 RAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFM 904
R+GRAGRTGPGKCYRLYTE A+R+EM PT +PEIQR NL T L +KAMGIN+L+ FDFM
Sbjct: 862 RSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDFDFM 921
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
D P ++I+A+ L++L ALD +GLLTKLGR+MAEFPL+P LSK+L+ SVDLGCS+E+L
Sbjct: 922 DAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVL 981
Query: 965 TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1024
TI+AM+ NIFYRP+EKQ ADQK+AKF QPEGDHLTLLAVY +WK +FS PWCFENF
Sbjct: 982 TIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFSQPWCFENF 1041
Query: 1025 VQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRT 1084
+Q RS++RAQD+RKQLL IMD++KL ++S G++ ++++KAI +GFF +AA++DPQEGYRT
Sbjct: 1042 IQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKRDPQEGYRT 1101
Query: 1085 LVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
L + Q VYIHPSSA FQ+QP+WV+YHELVMTTKEYMREVT IDPKWLV+ AP FFK+ D
Sbjct: 1102 LTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDS 1161
Query: 1145 TKMSKRKRQERIEPLYDRYHEPNSWRLSK 1173
TK+S KR ++I+PL+D+Y + N+WR+++
Sbjct: 1162 TKLSTFKRNQKIDPLFDKYADANAWRITR 1190
Score = 114 (45.2 bits), Expect = 8.5e-314, Sum P(2) = 8.5e-314
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 10 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA--EMPD 67
+ +LE+ SLVSKV SE+E H G +K +AEF+ L + T D+ L G + D
Sbjct: 1 MDQLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDD 60
Query: 68 YFVRTLLTIIHAI 80
T+L I+ ++
Sbjct: 61 SLTATILRIVQSM 73
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 2858 (1011.1 bits), Expect = 1.9e-307, Sum P(2) = 1.9e-307
Identities = 560/993 (56%), Positives = 717/993 (72%)
Query: 199 NKYGDRENDDSGDRSGRYRGNE-PELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGLVHVS 256
+KY D ND + R ++ P L +VY G V+ V D G FV L+ +GK +GLVHVS
Sbjct: 209 DKYDDY-NDGYDQKPARQDLDDTPVLQKVYDGHVTGVKDFGAFVNLHGVKGKVDGLVHVS 267
Query: 257 QIAT-RRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDAL 315
+ +R+ + D V + Q V VKVI + G ++ LSM++VDQ TG+DL P ++
Sbjct: 268 ALTDGQRVSHPSDFVDKGQPVKVKVIKIEGSRIGLSMKEVDQQTGEDLAP--EVGFHSGA 325
Query: 316 GNNPSGTRDGPTTRMGLSGIRIVEEDGV---VPSRRPLKRMSSPEKWEAKQLIASGVLSV 372
+ G+R + GL + + + +P R+ KRM+SPE+WE +Q+IASGV
Sbjct: 326 NSMALGSRHNLSN--GLLEDKAPDLSAIKNTLPGRKHKKRMTSPERWEIRQMIASGVAKA 383
Query: 373 EDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXX--FLQGQTRYSVDMSPVKIFKNPEGX 430
DYP +E+ + FL GQT+ S+++SP+++ K P+G
Sbjct: 384 SDYPELEEDYNNALSGEGQMELEEDVDIEIRDEEPPFLAGQTKQSLELSPIRVVKAPDGS 443
Query: 431 XXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPK----DLNRPWEDPMPETGERHLAQELRG 486
+K + DL WEDPM + +R A ++R
Sbjct: 444 LNRAAMAGTSLVKERKEIRQQEAEAAAQAAATNGKVDLASQWEDPMADPDKRKFAADMRR 503
Query: 487 V--GLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVV 544
+ +PEW++ K +FG+R+ ++I++QR+SLP++ +++LI+AV +NQ+++V
Sbjct: 504 TMQNRPSEAVPEWRQAIAPKNQSFGKRTNMTIKQQRESLPVFAFREQLIKAVKENQIMIV 563
Query: 545 IGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
+GETGSGKTTQ+TQYLAEAG+ G IGCTQPRRVAAMSVAKRV+EE GC LG+EVGY I
Sbjct: 564 VGETGSGKTTQLTQYLAEAGFANEGVIGCTQPRRVAAMSVAKRVSEEVGCELGQEVGYTI 623
Query: 605 RFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVK 664
RFEDCT P T IKYMTDGML REI+ID +L +YSVIMLDEAHERTI TDVLF LLK+ +
Sbjct: 624 RFEDCTSPATRIKYMTDGMLQREIVIDPDLKRYSVIMLDEAHERTIATDVLFALLKKATR 683
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQ 724
RRPDL++IVTSATLDA+KFS YF C IFTIPGRTFPVEILY+K PESDYLDA+L TV+Q
Sbjct: 684 RRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILYSKDPESDYLDAALTTVMQ 743
Query: 725 IHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFD 784
IH+ EP GDILLFLTGQEEID +C+ L+ERMK LG +VPELIILPVYSALP+EMQSRIFD
Sbjct: 744 IHIDEPPGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPVYSALPNEMQSRIFD 803
Query: 785 PAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQ 844
PAPPG RKVV+ATNIAE S+TID I+YV+DPGF KQN Y+PK G+DSLV+TPISQA A Q
Sbjct: 804 PAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMDSLVVTPISQAQANQ 863
Query: 845 RAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFM 904
RAGRAGRTGPGKC+RLYTE+AY+ EM PTSIPEIQR NL T L +KAMGINDLL FDFM
Sbjct: 864 RAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFM 923
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
DPP +++A+E+LY+L ALD+EGLLT+LGRKMA+FP++P LSK+L+ASV++ CSDE+L
Sbjct: 924 DPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLSKVLIASVEMRCSDEML 983
Query: 965 TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF 1024
+I+AM+ N+FYRP+EKQ QAD K+AKF P GDHLTLL VY AWK +S PWC ENF
Sbjct: 984 SIVAMLNLPNVFYRPKEKQTQADAKKAKFHDPNGDHLTLLNVYNAWKQSRYSKPWCAENF 1043
Query: 1025 VQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRT 1084
+Q R+L RA+DVR Q+ IM ++K VMS G + ++R+A+ +GFF +AARKD QEGYRT
Sbjct: 1044 IQFRALTRARDVRNQIERIMQRFKYQVMSCGSDTNRVRQALCSGFFRNAARKDQQEGYRT 1103
Query: 1085 LVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
L+E PVY+HPSSALF + +WVIYH LV+TTKEYM T I+PKWLVD AP FFKV+
Sbjct: 1104 LIEGTPVYLHPSSALFGKHAEWVIYHTLVLTTKEYMHCTTSIEPKWLVDAAPTFFKVSAS 1163
Query: 1145 TKMSKRKRQERIEPLYDRYHEPNSWRLS-KRRA 1176
K+SKR++QERI+PLY+++ N WRLS +RRA
Sbjct: 1164 DKLSKRRQQERIQPLYNKFEGENDWRLSAQRRA 1196
Score = 116 (45.9 bits), Expect = 1.9e-307, Sum P(2) = 1.9e-307
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 8 DGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPD 67
D L+ LE SLVSKV SEL+ H+G DK LA++I C+ + F K ++ E P
Sbjct: 2 DDLENLELLSLVSKVTSELKNHMGVDDKDLADYIIANRLECDGFEAF-KKWMDSECEFPP 60
Query: 68 YFVRTLLTIIHAILP 82
+ ++ ++ ++ P
Sbjct: 61 SLIESIDRLVRSMHP 75
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 2682 (949.2 bits), Expect = 5.7e-295, Sum P(3) = 5.7e-295
Identities = 529/969 (54%), Positives = 698/969 (72%)
Query: 219 NEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGLVHVSQIATR-RIGNAKDVVKRDQEV 276
N P LY +Y G VS + D G FV L+ FR + +GLVH+S I R+ + + V Q V
Sbjct: 202 NAPTLYGIYSGVVSGIKDFGAFVTLDGFRKRTDGLVHISNIQLNGRLDHPSEAVSYGQPV 261
Query: 277 YVKVISV--SGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNNPSGTRDGPTTRMGLSG 334
+VKVI + S +++SLSM++V+Q TG+DL P ++S G SG P + S
Sbjct: 262 FVKVIRIDESAKRISLSMKEVNQVTGEDLNP-DQVSRSTKKG---SGANAIPLSAQN-SE 316
Query: 335 IRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLSVEDYPMYDE--EGDGXXXXXXXX 392
I V S KR++SPE WE +QL ASG +S D P ++ +
Sbjct: 317 IGHVNPLETFTSNGR-KRLTSPEIWELQQLAASGAISATDIPELNDGFNTNNAAEINPED 375
Query: 393 XXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXXXXXXXXXXXXI--KXXXXXXX 450
FL GQT+ S+ +SP+K+ K P+G +
Sbjct: 376 DEDVEIELREEEPGFLAGQTKVSLKLSPIKVVKAPDGSLSRAAMQGQILANDRREIRQKE 435
Query: 451 XXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY--DMPEWKKDAFGKALTF 508
+ + +DL+ W+D M +R AQ++R + P W++ +++
Sbjct: 436 AKLKSEQEMEKQDLSLSWQDTMSNPQDRKFAQDVRDSAARQLTSETPSWRQATRNANISY 495
Query: 509 GQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 568
G+R+ LS++EQR+ LP++KL+K+ ++AV NQ+LV++GETGSGKTTQ+TQYLAE GYT+
Sbjct: 496 GKRTTLSMKEQREGLPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSD 555
Query: 569 GK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 627
K IGCTQPRRVAAMSVAKRVAEE GCR+GEEVGY IRFED T T IKYMTDGML RE
Sbjct: 556 SKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRE 615
Query: 628 ILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF 687
L+D LS+YSVI+LDEAHERT+ TDVLFGLLK V +RPDL+LIVTSATLDAE+FS YF
Sbjct: 616 CLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKRPDLKLIVTSATLDAERFSSYF 675
Query: 688 FNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFA 747
+ C IFTIPGR++PVEI+YTKQPE+DYLDA+L+TV+QIHL+E GDIL+FLTGQEEID +
Sbjct: 676 YKCPIFTIPGRSYPVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTS 735
Query: 748 CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTID 807
C+ LYER K LG ++PEL+ILPVYSALPSE+QSRIF+PAPPG RKVV+ATNIAE SLTID
Sbjct: 736 CEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTID 795
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
GI+YV+DPGF KQ+ ++PK G+DSL++TPISQA A+QR+GRAGRTGPGKCYRLYTESAYR
Sbjct: 796 GIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYR 855
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
NEM P+ IPEIQR NL T L +KAMGINDLL+FDFMDPP Q +I+A++ LY+L ALD+
Sbjct: 856 NEMLPSPIPEIQRQNLSHTILMLKAMGINDLLNFDFMDPPPAQTMIAALQNLYALSALDD 915
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 987
EGLLT LGRKMA+FP++P LSK+L+ SV+LGCS+E+L+IIAM+ NI+ RPREKQ +AD
Sbjct: 916 EGLLTPLGRKMADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEAD 975
Query: 988 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1047
++RA+F PE DHLTLL VY WK S WC+E+++Q+R +RRA+DVRKQL+ +MD+Y
Sbjct: 976 RQRAQFANPESDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDRY 1035
Query: 1048 KLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPVYIHPSSALFQRQPDW 1106
+ V+S G+ I +A+ +G+F + A++D EG Y+T+VEN PVY+HPS LF + +W
Sbjct: 1036 RHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEW 1095
Query: 1107 VIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDRYHEP 1166
VIYHEL+ T+KEYM V+ ++PKWLV++AP FFK A+ ++SK K+ ++ PLY+R+ +P
Sbjct: 1096 VIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVSKTKKNLKVLPLYNRFEKP 1155
Query: 1167 NSWRLSKRR 1175
+ WR+SK+R
Sbjct: 1156 DEWRISKQR 1164
Score = 153 (58.9 bits), Expect = 5.7e-295, Sum P(3) = 5.7e-295
Identities = 33/75 (44%), Positives = 42/75 (56%)
Query: 8 DGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPD 67
D LK+LEY SLVSKV SE+ H G D LAEFI L + DEF + + G E D
Sbjct: 2 DDLKELEYLSLVSKVASEIRNHTGIDDNTLAEFIINLHDQSKNYDEFKNNVLSCGGEFTD 61
Query: 68 YFVRTLLTIIHAILP 82
F++ + +I I P
Sbjct: 62 SFLQNISRLIKEIKP 76
Score = 41 (19.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 213 SGRYRGNEPELYQVYKGRVSRVVDTGCFVQLND 245
+GR R PE++++ + S + +LND
Sbjct: 329 NGRKRLTSPEIWELQQLAASGAISATDIPELND 361
Score = 39 (18.8 bits), Expect = 5.7e-295, Sum P(3) = 5.7e-295
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 282 SVSGQKLSLSMRDVDQNTGKDLLP 305
SV+G L +DVD+ + + P
Sbjct: 91 SVNGASHDLDSKDVDKQHQRKMFP 114
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 2590 (916.8 bits), Expect = 1.1e-276, Sum P(3) = 1.1e-276
Identities = 518/994 (52%), Positives = 687/994 (69%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRG-KEGL 252
++ + + D++N++ D+S Y + L ++ G ++++ D G FV G KEGL
Sbjct: 303 KKKEKTHRDKKNEE--DKSYDDYMALK--LNNIFNGTINKITDFGLFVSFKTNEGYKEGL 358
Query: 253 VHVSQIAT--RRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLL--PLKK 308
VH + I +R+ N + KR+ +V VKV + QK+SL+M +VDQ TGK+L+ + K
Sbjct: 359 VHATDILPNRKRVVNMNEKFKRNMKVKVKVKGIFNQKISLNMSEVDQKTGKNLVNDDMNK 418
Query: 309 ISEDDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASG 368
ED+ + D + + + + + +K S KWE +QLI SG
Sbjct: 419 -EEDNYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWEIQQLIKSG 477
Query: 369 VLSVEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQT-RYSVDMSPVKIFKNP 427
V+ E+ + + FL+GQT + +SP++I N
Sbjct: 478 VVFDENI-RNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTKAGAKLSPIQIIVNA 536
Query: 428 EGXXXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 487
EG K + D+IPKD++RPWEDP P GER +A+ L+ +
Sbjct: 537 EGSLAKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNI 596
Query: 488 GLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 547
G + YD+PEWKK+ ++ G ++ L I EQR LPIY LK +L++A+ N VL+VIGE
Sbjct: 597 GKN-YDIPEWKKNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGE 655
Query: 548 TGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 607
TGSGKTTQ+ QYL EA YT +G +GCTQPRRVAAMS+AKRV+EEFGC LG+EVGY+IRF+
Sbjct: 656 TGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFD 715
Query: 608 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP 667
DCT DT+IKY+TDGMLLRE L D L++YS I+LDEAHERTI TD+LF LLK +V++R
Sbjct: 716 DCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
Query: 668 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHL 727
D +LIVTSATLDAEKFS YFFN IFTIPG+ FPVEIL++K+PESDY++ASLITVL IHL
Sbjct: 776 DFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHL 835
Query: 728 TEPEGDILLFLTGQEEIDFACQSLYERMKGL-GKNVPELIILPVYSALPSEMQSRIFDPA 786
E GDIL+FLTGQ+EI+ AC+ L+ERMK L + P LIILP+YS+LPSEMQS IF+PA
Sbjct: 836 NEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPA 895
Query: 787 PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 846
PPG RK ++ATNIAEASLTIDGIF+VIDPGF K Y+ K+ +DSL++ PIS+A+AKQRA
Sbjct: 896 PPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRA 955
Query: 847 GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDP 906
GRAGRTGPGKCYRLYTE AY+NEMS S+PEIQRINLG L +KA+GIND L FDFMD
Sbjct: 956 GRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDS 1015
Query: 907 PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI 966
PS + LI ++E LY LGALD+ G LTKLG+KMA FP++P LSK+LL S++ C+D+++TI
Sbjct: 1016 PSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Query: 967 IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1026
++M+ NIFYRP+ K AD+K+ KF P+GD +T L +Y WK +FS WC ENF+Q
Sbjct: 1076 VSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQ 1135
Query: 1027 SRSLRRAQDVRKQLLSIMDKYKLDVM-SAGKN----FTKIRKAITAGFFFHAARKDPQEG 1081
SR+L+RAQDVRKQ+LSI +KY V S KN + I K+I +G+F H ++D Q+G
Sbjct: 1136 SRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQG 1195
Query: 1082 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKV 1141
Y TL+ NQ V+IHPSS LF + P +V+YHELV+T KEY+R+ T+I P+WL+ LAP F
Sbjct: 1196 YTTLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIP 1255
Query: 1142 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
AD K+SK K +E+IEPL++ Y EPN+WRLS+R+
Sbjct: 1256 ADEKKISKIKLREKIEPLHNYYEEPNAWRLSRRK 1289
Score = 70 (29.7 bits), Expect = 1.1e-276, Sum P(3) = 1.1e-276
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 13 LEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYFVRT 72
L +L+ KV EL +G D L+EF+ L +++EF + ENG + ++
Sbjct: 4 LSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAVLKY 63
Query: 73 LLTII 77
+ +I
Sbjct: 64 IYNMI 68
Score = 41 (19.5 bits), Expect = 1.1e-276, Sum P(3) = 1.1e-276
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 195 RRYDNKYGDRENDDSGDRSGRYR 217
R+YD +Y DR + + S ++R
Sbjct: 216 RKYDERYYDRHSKEH-HHSNKHR 237
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 2590 (916.8 bits), Expect = 1.1e-276, Sum P(3) = 1.1e-276
Identities = 518/994 (52%), Positives = 687/994 (69%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRG-KEGL 252
++ + + D++N++ D+S Y + L ++ G ++++ D G FV G KEGL
Sbjct: 303 KKKEKTHRDKKNEE--DKSYDDYMALK--LNNIFNGTINKITDFGLFVSFKTNEGYKEGL 358
Query: 253 VHVSQIAT--RRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLL--PLKK 308
VH + I +R+ N + KR+ +V VKV + QK+SL+M +VDQ TGK+L+ + K
Sbjct: 359 VHATDILPNRKRVVNMNEKFKRNMKVKVKVKGIFNQKISLNMSEVDQKTGKNLVNDDMNK 418
Query: 309 ISEDDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASG 368
ED+ + D + + + + + +K S KWE +QLI SG
Sbjct: 419 -EEDNYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWEIQQLIKSG 477
Query: 369 VLSVEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQT-RYSVDMSPVKIFKNP 427
V+ E+ + + FL+GQT + +SP++I N
Sbjct: 478 VVFDENI-RNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTKAGAKLSPIQIIVNA 536
Query: 428 EGXXXXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 487
EG K + D+IPKD++RPWEDP P GER +A+ L+ +
Sbjct: 537 EGSLAKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNI 596
Query: 488 GLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 547
G + YD+PEWKK+ ++ G ++ L I EQR LPIY LK +L++A+ N VL+VIGE
Sbjct: 597 GKN-YDIPEWKKNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGE 655
Query: 548 TGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 607
TGSGKTTQ+ QYL EA YT +G +GCTQPRRVAAMS+AKRV+EEFGC LG+EVGY+IRF+
Sbjct: 656 TGSGKTTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFD 715
Query: 608 DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP 667
DCT DT+IKY+TDGMLLRE L D L++YS I+LDEAHERTI TD+LF LLK +V++R
Sbjct: 716 DCTSNDTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRA 775
Query: 668 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHL 727
D +LIVTSATLDAEKFS YFFN IFTIPG+ FPVEIL++K+PESDY++ASLITVL IHL
Sbjct: 776 DFKLIVTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHL 835
Query: 728 TEPEGDILLFLTGQEEIDFACQSLYERMKGL-GKNVPELIILPVYSALPSEMQSRIFDPA 786
E GDIL+FLTGQ+EI+ AC+ L+ERMK L + P LIILP+YS+LPSEMQS IF+PA
Sbjct: 836 NEHPGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPA 895
Query: 787 PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 846
PPG RK ++ATNIAEASLTIDGIF+VIDPGF K Y+ K+ +DSL++ PIS+A+AKQRA
Sbjct: 896 PPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRA 955
Query: 847 GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDP 906
GRAGRTGPGKCYRLYTE AY+NEMS S+PEIQRINLG L +KA+GIND L FDFMD
Sbjct: 956 GRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDS 1015
Query: 907 PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI 966
PS + LI ++E LY LGALD+ G LTKLG+KMA FP++P LSK+LL S++ C+D+++TI
Sbjct: 1016 PSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTI 1075
Query: 967 IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1026
++M+ NIFYRP+ K AD+K+ KF P+GD +T L +Y WK +FS WC ENF+Q
Sbjct: 1076 VSMLSVQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQ 1135
Query: 1027 SRSLRRAQDVRKQLLSIMDKYKLDVM-SAGKN----FTKIRKAITAGFFFHAARKDPQEG 1081
SR+L+RAQDVRKQ+LSI +KY V S KN + I K+I +G+F H ++D Q+G
Sbjct: 1136 SRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQG 1195
Query: 1082 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKV 1141
Y TL+ NQ V+IHPSS LF + P +V+YHELV+T KEY+R+ T+I P+WL+ LAP F
Sbjct: 1196 YTTLLTNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIP 1255
Query: 1142 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
AD K+SK K +E+IEPL++ Y EPN+WRLS+R+
Sbjct: 1256 ADEKKISKIKLREKIEPLHNYYEEPNAWRLSRRK 1289
Score = 70 (29.7 bits), Expect = 1.1e-276, Sum P(3) = 1.1e-276
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 13 LEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYFVRT 72
L +L+ KV EL +G D L+EF+ L +++EF + ENG + ++
Sbjct: 4 LSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAVLKY 63
Query: 73 LLTII 77
+ +I
Sbjct: 64 IYNMI 68
Score = 41 (19.5 bits), Expect = 1.1e-276, Sum P(3) = 1.1e-276
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 195 RRYDNKYGDRENDDSGDRSGRYR 217
R+YD +Y DR + + S ++R
Sbjct: 216 RKYDERYYDRHSKEH-HHSNKHR 237
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 2194 (777.4 bits), Expect = 6.8e-255, Sum P(4) = 6.8e-255
Identities = 414/710 (58%), Positives = 548/710 (77%)
Query: 470 DPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLK 529
DP+ +T E +L ++ + +WKK K TFG+R+ L IQEQR+ LP+Y ++
Sbjct: 287 DPLFQTSEPVKNSDL-DPDTESF-ISKWKKS--NKTETFGKRTSLPIQEQRRMLPVYAMR 342
Query: 530 KELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK----IGCTQPRRVAAMSVA 585
+L++A+ DNQ +V++GETGSGKTTQ+ QY+ E G G IGCTQPRRVAA SVA
Sbjct: 343 SQLLEAIRDNQFVVIVGETGSGKTTQIVQYIYEEGMNKVGGQTKLIGCTQPRRVAAESVA 402
Query: 586 KRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEA 645
KRV+EE GC+LG+ VGY IRFED T +TVIKYMTDGML RE L D N+++YSVIMLDEA
Sbjct: 403 KRVSEEVGCKLGDTVGYTIRFEDVTSENTVIKYMTDGMLEREALNDPNMNRYSVIMLDEA 462
Query: 646 HERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEIL 705
HERTI TDVLF LLK K+ P+L++IVTSATLD+ KFS YF NC I TIPGRTFPVE+L
Sbjct: 463 HERTIATDVLFALLKNAAKQNPNLKVIVTSATLDSNKFSRYFNNCPIITIPGRTFPVEVL 522
Query: 706 YTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPEL 765
YTK PE DYL A+L +V+QIH++EP GDIL+FLTGQEEI+ +C++L+ERMK LG+N+PEL
Sbjct: 523 YTKAPEMDYLAAALESVIQIHVSEPAGDILVFLTGQEEIETSCEALHERMKLLGENIPEL 582
Query: 766 IILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNP 825
IILPVYSALPSEMQ+RIF+P PPG RKV++ATNIAE S+TIDGI+YV+DPGF K N+Y+
Sbjct: 583 IILPVYSALPSEMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDS 642
Query: 826 KQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGF 885
K G+DSL +TPIS+A A QR+GRAGRTGPGKCYRLYTE AY EM P +IPEIQR NL
Sbjct: 643 KLGMDSLRVTPISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSH 702
Query: 886 TTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDP 945
T L +KAMGI+DL++F+FMDPPS +++A+E LY L ALD++G LT LGRKMA+ P++P
Sbjct: 703 TILMLKAMGIHDLVNFEFMDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEP 762
Query: 946 PLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLA 1005
L+K L+ SV+ C++EIL+I+AM+ IFYRP++KQA ADQ++++F GDHLTLL
Sbjct: 763 ALAKTLIQSVEYECTEEILSIVAMLSVQTIFYRPKDKQALADQRKSRFHHSLGDHLTLLN 822
Query: 1006 VYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAI 1065
V+++W N+S WC +NF+Q RS+RRA +VRKQL SIM ++ MS G + ++R+
Sbjct: 823 VFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCGNDVDRVRRTF 882
Query: 1066 TAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTV 1125
+G+F ++A++ EGY+TL EN VY+HPSS+L+ ++P +VIYH L++T+KEYM V++
Sbjct: 883 CSGYFKNSAKRQEGEGYKTLNENTLVYLHPSSSLYGKKPQYVIYHTLLLTSKEYMHCVSI 942
Query: 1126 IDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
IDP WL +LAP++F+ AD + + K++++I PL+ R + N WRLS R
Sbjct: 943 IDPNWLYELAPKYFRPADAKTVQEIKKKQKIVPLFSRQKKDN-WRLSSHR 991
Score = 131 (51.2 bits), Expect = 6.8e-255, Sum P(4) = 6.8e-255
Identities = 30/86 (34%), Positives = 54/86 (62%)
Query: 221 PELYQVYKGRVSRVVDTGCFVQLNDFRGKEGLVHVSQIAT--RRIGNAKDVVKRDQEVYV 278
P++ ++Y G V V + G F+++ G GL H+SQ++ R+ + +V+ +Q+V+V
Sbjct: 73 PQVGKIYSGVVQSVTNYGAFIKIE---GTSGLCHISQMSFDGSRV-ESTNVLAPNQKVFV 128
Query: 279 KVISVS--GQKLSLSMRDVDQNTGKD 302
KVI + ++SLSMR ++QNTG +
Sbjct: 129 KVIDIQTHANRISLSMRGINQNTGHE 154
Score = 117 (46.2 bits), Expect = 6.8e-255, Sum P(4) = 6.8e-255
Identities = 19/36 (52%), Positives = 29/36 (80%)
Query: 348 RPLKRMSSPEKWEAKQLIASGVLSVEDYPMYDEEGD 383
RP ++++SPE+WE +QLI+SG +S +DYP D+E D
Sbjct: 169 RPKRKLTSPERWEIRQLISSGAVSADDYPELDQEED 204
Score = 66 (28.3 bits), Expect = 6.8e-255, Sum P(4) = 6.8e-255
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 36 VLAEFITELGRNCETVDEFDSKLKENGA-EMPDYFVRTLLTIIHAILPP 83
++A+F+ L N T++EF +KENG E D F++ + + I PP
Sbjct: 27 LIAKFLVNLHGN-STLEEFKKVVKENGGDEFEDEFIKE---VYNEISPP 71
Score = 42 (19.8 bits), Expect = 1.5e-234, Sum P(3) = 1.5e-234
Identities = 27/129 (20%), Positives = 45/129 (34%)
Query: 255 VSQIATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDA 314
+ Q+ + +A D + DQE + S L + + D + K + K E
Sbjct: 182 IRQLISSGAVSADDYPELDQEEDTQTESEKTDNLHIELNDKKPDFLKGVKVTKDFPETTP 241
Query: 315 LGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLSVED 374
+ N SG P T+ G + + K+ EK E Q S L
Sbjct: 242 IPVNQSG----PLTKSAQRGSKFARDF----KEEKFKQKKQREKEEKMQSELSDPLFQTS 293
Query: 375 YPMYDEEGD 383
P+ + + D
Sbjct: 294 EPVKNSDLD 302
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 2139 (758.0 bits), Expect = 5.6e-237, Sum P(3) = 5.6e-237
Identities = 396/681 (58%), Positives = 528/681 (77%)
Query: 496 EWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQ 555
EW+K+ +++++G+R+ L I QRQ+LP+Y ++ ELIQAV DNQ LV++GETGSGKTTQ
Sbjct: 456 EWEKNRMNESISYGKRTSLPISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQ 515
Query: 556 VTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV 615
+TQYL E G++ G IGCTQPRRVAA+SVAKRVAEE GC++G +VGY IRFED TGPDT
Sbjct: 516 ITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTR 575
Query: 616 IKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTS 675
IKYMTDGML RE L+D +S+YSVIMLDEAHERT+ TDVLF LLK+ +RP+L++IVTS
Sbjct: 576 IKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAAIKRPELKVIVTS 635
Query: 676 ATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDIL 735
ATL++ KFS YF NC I IPG+TFPVE+LY++ P+ DY++A+L V+ IH+ E GDIL
Sbjct: 636 ATLNSAKFSEYFLNCPIINIPGKTFPVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDIL 695
Query: 736 LFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVV 795
+FLTGQEEID C+ LY+R+K LG ++ EL+ILPVYSALPSE+QS+IF+P P G RKVV
Sbjct: 696 VFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVF 755
Query: 796 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPG 855
ATNIAE S+TIDGI+YV+DPGFAK N+YN + G++ L+++PISQA A QR GRAGRTGPG
Sbjct: 756 ATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPG 815
Query: 856 KCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISA 915
KCYRLYTESA+ NEM ++PEIQR NL T L +KAMGINDLL FDFMDPP +++A
Sbjct: 816 KCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNA 875
Query: 916 MEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNI 975
+ +LY L +LD+EG LT LG++M+ FP+DP LS+ LL+SVD CSDEI+TII+M+ N+
Sbjct: 876 LTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNV 935
Query: 976 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQD 1035
FYRP+++Q +AD K+AKF P GDHLTLL VY W+ N+S +C NF+ R L+RA+D
Sbjct: 936 FYRPKDRQLEADSKKAKFHHPYGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARD 995
Query: 1036 VRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHP 1095
V+ Q+ I K L ++S + IRK +GFF +AA++D Q GY+T+ V IHP
Sbjct: 996 VKSQISMIFKKIGLKLISCHSDPDLIRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHP 1055
Query: 1096 SSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQER 1155
SS+L+ ++ ++V+YH +V+T++EYM +VT I+P+WL+++AP F+K D S++K +
Sbjct: 1056 SSSLYGKEYEYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYKAGDAESQSRKKA--K 1113
Query: 1156 IEPLYDRY-HEPNSWRLSKRR 1175
I PL++++ + NSWRLS R
Sbjct: 1114 IIPLHNKFAKDQNSWRLSSIR 1134
Score = 136 (52.9 bits), Expect = 5.6e-237, Sum P(3) = 5.6e-237
Identities = 47/161 (29%), Positives = 74/161 (45%)
Query: 221 PELYQVYKGRVSRVVDTGCFVQLNDFRGKEGLVHVSQIATRRIGNAKDVVKRDQEVYVKV 280
P L++VY+G+V + GCFVQ+ R K + + I D D V+
Sbjct: 175 PVLHKVYEGKVRNITTFGCFVQIFGTRMK----NCDGLV--HISEMSDQRTLDPHDVVR- 227
Query: 281 ISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNNPSGTRDGPTTRMGLSGIRIVEE 340
GQ + + + + QN GK L +K I D G + R G S
Sbjct: 228 ---QGQHIFVEVIKI-QNNGKISLSMKNI--DQHSGEIRKRNTESVEDR-GRSNDAHTSR 280
Query: 341 DGVVPSRRPLKRMSSPEKWEAKQLIASGVLSVEDYPMYDEE 381
+ + ++ + ++SPE+WE +QLIASG S++DYP +E
Sbjct: 281 N--MKNKIKRRALTSPERWEIRQLIASGAASIDDYPELKDE 319
Score = 50 (22.7 bits), Expect = 5.6e-237, Sum P(3) = 5.6e-237
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 12 KLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKL 58
K++ L K+ L+ + D V+ EF+ + +++ EF +L
Sbjct: 71 KVKSSPLSQKINQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQEQL 117
Score = 37 (18.1 bits), Expect = 5.1e-223, Sum P(2) = 5.1e-223
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGS 550
LSI + +S+ ++ + L+Q+ DN+ + I + S
Sbjct: 101 LSILNKSKSITEFQEQLNLMQSGLDNETIFKIYQIAS 137
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 2043 (724.2 bits), Expect = 5.0e-214, Sum P(2) = 5.0e-214
Identities = 380/650 (58%), Positives = 501/650 (77%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
++K++IQE R+SLP+Y +++LI AV + QVL+++GETGSGKTTQ+ QYL EAG++ GK
Sbjct: 455 QAKMTIQEVRKSLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGK 514
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
IGCTQPRRVAAMSVA RVAEE GC+LG EVGY+IRFEDCT TV++YMTDGML+RE L
Sbjct: 515 IGCTQPRRVAAMSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLT 574
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
+L+ YSV+++DEAHERT+HTD+LFGLLK + + RPDL+L+++SAT+DAE+FS YF
Sbjct: 575 APDLASYSVLIIDEAHERTLHTDILFGLLKDITRFRPDLKLLISSATMDAERFSDYFDGA 634
Query: 691 NIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
F IPGR + V YT+ PE+DYLDA+++TVLQIH+TEP GDIL+FLTGQEE+D A +
Sbjct: 635 PTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEM 694
Query: 751 LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIF 810
L R +GLG + ELII +YS LP+++Q++IF+P PP RKVV+ATNIAE SLTIDGI
Sbjct: 695 LQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGII 754
Query: 811 YVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 870
YVIDPGF KQ ++NP+ G++SLVITP+S+ASA QR GRAGR PGKC+RL+T A+ NE+
Sbjct: 755 YVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNEL 814
Query: 871 SPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGL 930
+IPEIQR NLG L +K+MGINDL++FDFMDPP Q LI+A+EQLY+LGAL++ G
Sbjct: 815 EENTIPEIQRTNLGNVVLLLKSMGINDLMNFDFMDPPPAQTLIAALEQLYALGALNDRGQ 874
Query: 931 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQK 989
LTKLGRKMAEFP+DP LSKM++AS CS+EILTI AM+ GN IFYRP++K AD
Sbjct: 875 LTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAA 934
Query: 990 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL 1049
R FF P+GDHLTL+ V+ W+ ++ WCFENF+Q RS++RAQDVR QL ++++ ++
Sbjct: 935 RKLFFHPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEI 994
Query: 1050 DVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
++S + IRK I +GFF+++A+ + +RT NQ V IHPSS LFQ P WV+Y
Sbjct: 995 PLVSNVDDTDSIRKCIASGFFYNSAKLEKSGLFRTTKHNQSVQIHPSSCLFQSPPKWVVY 1054
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADPTKMSKRKRQERI 1156
HELV+TTKE+MR++ I WL ++AP +K V D K+ K +++I
Sbjct: 1055 HELVLTTKEFMRQIVEIQSSWLHEIAPHIYKEKDVNDNQKLPKNIGKKQI 1104
Score = 48 (22.0 bits), Expect = 5.0e-214, Sum P(2) = 5.0e-214
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 17 SLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
S+ + V ++ LG+ + + ++I L + + V+ F S L E
Sbjct: 7 SIKNWVSDKIFDILGYRESTMVDYIIALSKKAKDVNSFISTLTE 50
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 2031 (720.0 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 377/648 (58%), Positives = 497/648 (76%)
Query: 506 LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY 565
L+ ++ K SIQE R+SLPI+ +++L+ A+ D+Q+LV+ GETGSGKTTQ+ QYL E GY
Sbjct: 395 LSQAEKQKQSIQEVRRSLPIFPYREDLLAAIGDHQILVIEGETGSGKTTQIPQYLLEEGY 454
Query: 566 TTRG-KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 624
T G KIGCTQPRRVAAMSVA RVA+E +LG EVGY+IRFEDCT T++KYMTDGML
Sbjct: 455 TKGGMKIGCTQPRRVAAMSVAARVAQEMSVKLGNEVGYSIRFEDCTSERTILKYMTDGML 514
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LRE L + +L+ YSVI++DEAHERT+HTD+LFGL+K + + RPDL+++V SATLD E+FS
Sbjct: 515 LREFLTEPDLASYSVIIIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFS 574
Query: 685 GYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
+F + +F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+ GD+L+FLTGQEEI
Sbjct: 575 SFFDDAPVFRIPGRRFPVDIYYTKAPEADYLEACVVSVLQIHVTQSPGDVLVFLTGQEEI 634
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ C+ L ER + LG + EL++LP+Y+ LPS+MQ++IF+P PPG RKVVVATNIAE SL
Sbjct: 635 EACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSL 694
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TIDGI YVIDPGF KQ YN K G++SL++TP S+ASA QRAGRAGR GKC+RLYT
Sbjct: 695 TIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAW 754
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
A+++EM T++PEIQR NLG L +K++GINDL+ FDFMDPP + L+ A+EQLY+LGA
Sbjct: 755 AFKHEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGA 814
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQ 983
L+ G LTKLGR+MAE P+DP LSKM+LAS CS+E+LTI AM+ N IFYRP++K
Sbjct: 815 LNHLGELTKLGRRMAELPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKV 874
Query: 984 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1043
AD R F P GDHL LL VY W +S WCFENF+Q RS++RA+DVR QL +
Sbjct: 875 VHADNARMNFVVPGGDHLVLLNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGL 934
Query: 1044 MDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1103
MD+ ++++ S+ + IRKA+TAG+F+H AR + GY+T+ Q VY+HP+S+LF+ Q
Sbjct: 935 MDRIEVELCSSNGDSMPIRKAVTAGYFYHTARLS-KGGYKTVKHQQTVYVHPNSSLFEEQ 993
Query: 1104 PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRK 1151
P W+IYHELV TTKE+MR+V I+ WL+++AP ++K + S +K
Sbjct: 994 PRWMIYHELVFTTKEFMRQVIEIESGWLLEVAPHYYKNKELEDSSSKK 1041
Score = 54 (24.1 bits), Expect = 2.1e-213, Sum P(2) = 2.1e-213
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENG 62
V +L LG D+ +A+F+ L + +F S+L++ G
Sbjct: 8 VSDQLHDILGLSDRYVAQFMIGLVQKSSGPQDFVSRLQDTG 48
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 2013 (713.7 bits), Expect = 4.0e-212, Sum P(2) = 4.0e-212
Identities = 375/662 (56%), Positives = 505/662 (76%)
Query: 503 GKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE 562
G L+ + K SIQ R+SLP++ ++EL+ A+ ++QVL++ GETGSGKTTQ+ QYL E
Sbjct: 382 GPPLSAQAQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFE 441
Query: 563 AGYTTRG-KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
GYT +G KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTD
Sbjct: 442 EGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTD 501
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
GMLLRE L + +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SATLD
Sbjct: 502 GMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTA 561
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQ 741
+FS +F + +F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQ
Sbjct: 562 RFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQ 621
Query: 742 EEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAE 801
EEI+ AC+ L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE
Sbjct: 622 EEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAE 681
Query: 802 ASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLY 861
SLTI+GI YV+DPGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLY
Sbjct: 682 TSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLY 741
Query: 862 TESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYS 921
T AY++E+ T++PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+
Sbjct: 742 TAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYA 801
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPR 980
LGAL+ G LT GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP+
Sbjct: 802 LGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPK 861
Query: 981 EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQL 1040
+K AD R FF P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL
Sbjct: 862 DKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQL 921
Query: 1041 LSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF 1100
++++ ++ + S ++ ++RKAIT+G+F+H AR + GYRT+ + Q V+IHP+S+LF
Sbjct: 922 EGLLERVEVGLTSCQGDYVRVRKAITSGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLF 980
Query: 1101 QRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQER 1155
++QP W++YHELV+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R
Sbjct: 981 EQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKVGKTR 1040
Query: 1156 IE 1157
E
Sbjct: 1041 EE 1042
Score = 60 (26.2 bits), Expect = 4.0e-212, Sum P(2) = 4.0e-212
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + +EF +L++
Sbjct: 11 VQEELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 2009 (712.3 bits), Expect = 1.1e-211, Sum P(2) = 1.1e-211
Identities = 374/654 (57%), Positives = 501/654 (76%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG- 569
+ K SIQ R+SLP++ ++EL+ AV ++Q+L++ GETGSGKTTQ+ QYL E GYT +G
Sbjct: 391 QQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGM 450
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SATLD +FS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 749
+F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+
Sbjct: 571 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 630
Query: 750 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI
Sbjct: 631 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 690
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
YV+DPGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
+ T++PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQ 988
LT GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYK 1048
R FF P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ +
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1049 LDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVI 1108
+ + S ++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF+ QP W++
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
YHELV+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREE 1043
Score = 60 (26.2 bits), Expect = 1.1e-211, Sum P(2) = 1.1e-211
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + +EF +L++
Sbjct: 11 VQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 2009 (712.3 bits), Expect = 1.1e-211, Sum P(2) = 1.1e-211
Identities = 374/654 (57%), Positives = 501/654 (76%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG- 569
+ K SIQ R+SLP++ ++EL+ AV ++Q+L++ GETGSGKTTQ+ QYL E GYT +G
Sbjct: 391 QQKESIQAVRRSLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGM 450
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SATLD +FS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 749
+F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+
Sbjct: 571 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 630
Query: 750 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI
Sbjct: 631 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 690
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
YV+DPGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
+ T++PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQ 988
LT GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYK 1048
R FF P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ +
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1049 LDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVI 1108
+ + S ++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF+ QP W++
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
YHELV+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKTGKTREE 1043
Score = 60 (26.2 bits), Expect = 1.1e-211, Sum P(2) = 1.1e-211
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + +EF +L++
Sbjct: 11 VQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 2011 (713.0 bits), Expect = 1.3e-211, Sum P(2) = 1.3e-211
Identities = 374/654 (57%), Positives = 501/654 (76%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG- 569
+ K S+Q R+SLP++ ++EL+ A+ D+QVL++ GETGSGKTTQ+ QYL E GYT +G
Sbjct: 388 QQKESVQAVRRSLPVFPFREELLAAIADHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGM 447
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 448 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 507
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SATLD +FS +F +
Sbjct: 508 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 567
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 749
+F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+
Sbjct: 568 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 627
Query: 750 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI
Sbjct: 628 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 687
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
YV+DPGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E
Sbjct: 688 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 747
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
+ T++PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 748 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 807
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQ 988
LT GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD
Sbjct: 808 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 867
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYK 1048
R FF P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ +
Sbjct: 868 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 927
Query: 1049 LDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVI 1108
+ + S ++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF+ QP W++
Sbjct: 928 VGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLL 986
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
YHELV+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 987 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHSKKMPKKIGKTREE 1040
Score = 57 (25.1 bits), Expect = 1.3e-211, Sum P(2) = 1.3e-211
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + ++F +L++
Sbjct: 11 VQDELHSVLGLSERHVAQFLIGTAQRCASAEDFVQRLRD 49
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 2008 (711.9 bits), Expect = 1.3e-211, Sum P(2) = 1.3e-211
Identities = 375/654 (57%), Positives = 501/654 (76%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG- 569
+ K SIQ R+SLP++ ++EL+ A+ ++QVL++ GETGSGKTTQ+ QYL E GYT +G
Sbjct: 391 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTKKGM 450
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 451 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 510
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SATLD +FS +F +
Sbjct: 511 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSTFFDD 570
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 749
IF IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+
Sbjct: 571 APIFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 630
Query: 750 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI
Sbjct: 631 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 690
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
YV+DPGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E
Sbjct: 691 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 750
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
+ T++PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 751 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 810
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQ 988
LT GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD
Sbjct: 811 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 870
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYK 1048
R FF P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ +
Sbjct: 871 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 930
Query: 1049 LDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVI 1108
+ + S ++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF+ QP W++
Sbjct: 931 VGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEEQPRWLL 989
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
YHELV+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 990 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREE 1043
Score = 60 (26.2 bits), Expect = 1.3e-211, Sum P(2) = 1.3e-211
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + +EF +L++
Sbjct: 11 VQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRD 49
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 2007 (711.6 bits), Expect = 1.7e-211, Sum P(2) = 1.7e-211
Identities = 373/654 (57%), Positives = 502/654 (76%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG- 569
+ K SIQ R+SLP++ ++EL+ A+ ++QVL++ GETGSGKTTQ+ QYL E GYT +G
Sbjct: 387 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM 446
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 447 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 506
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SAT+D +FS +F +
Sbjct: 507 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 566
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 749
+F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+
Sbjct: 567 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 626
Query: 750 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI
Sbjct: 627 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGI 686
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
YV+DPGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E
Sbjct: 687 IYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHE 746
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
+ T++PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G
Sbjct: 747 LEETTVPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLG 806
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQ 988
LT GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD
Sbjct: 807 ELTTSGRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADN 866
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYK 1048
R FF P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ +
Sbjct: 867 ARVNFFLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVE 926
Query: 1049 LDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVI 1108
+ + S ++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF++QP W++
Sbjct: 927 VGLSSCQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLL 985
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
YHELV+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 986 YHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREE 1039
Score = 60 (26.2 bits), Expect = 1.7e-211, Sum P(2) = 1.7e-211
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + +EF +L++
Sbjct: 11 VQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRD 49
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 2006 (711.2 bits), Expect = 2.9e-209, Sum P(2) = 2.9e-209
Identities = 375/654 (57%), Positives = 502/654 (76%)
Query: 506 LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY 565
LT +R +L++ E R+SLP+Y K++LI AV ++QVL++ GETGSGKTTQV QYL EAG+
Sbjct: 235 LTEKERKRLTLDETRRSLPVYPFKEDLIAAVKEHQVLIIEGETGSGKTTQVPQYLVEAGF 294
Query: 566 TTRGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 624
T K IGCTQPRRVAAMSVA RVAEE G +LG EVGY+IRFEDCT T++KYMTDG L
Sbjct: 295 TKDKKMIGCTQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDCTSDRTILKYMTDGTL 354
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
RE L + +L+ YSV+++DEAHERT+HTD+LFGL+K + + RP+L+L+++SATLDAEKFS
Sbjct: 355 HREFLSEPDLASYSVMIIDEAHERTLHTDILFGLVKDIARFRPELKLLISSATLDAEKFS 414
Query: 685 GYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
+F + IF IPGR +PV+I YTK PE+DY+DA ++VLQIH T+P GDIL+FLTGQ+EI
Sbjct: 415 AFFDDAPIFRIPGRRYPVDIFYTKAPEADYIDACCVSVLQIHATQPLGDILVFLTGQDEI 474
Query: 745 DFACQS-LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEAS 803
+ CQ L++R+K LG + ELI++PVY+ LPS+MQ++IF+P PP RKV++ATNIAE S
Sbjct: 475 E-TCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNARKVILATNIAETS 533
Query: 804 LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 863
LTID I YVIDPGFAKQN +N + G++SL++ PIS+ASA QRAGRAGRT PGKC+RLYT
Sbjct: 534 LTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTA 593
Query: 864 SAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 923
AY++E+ ++PEIQRINLG L +KA+GINDL+ FDF+DPP + L+ A+EQLY+LG
Sbjct: 594 WAYKHELEDNTVPEIQRINLGNAVLMLKALGINDLIHFDFLDPPPHETLVLALEQLYALG 653
Query: 924 ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREK 982
AL+ G LTKLGR+MAEFP+DP + KMLLAS CS+E++TI AM+ + IFYRP++K
Sbjct: 654 ALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDK 713
Query: 983 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLS 1042
AD R F GDHL+LL VY W ++S WC+ENF+Q RS++RA+DVR+QL+
Sbjct: 714 IIHADTARKNFNHMHGDHLSLLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVG 773
Query: 1043 IMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR 1102
+M + ++D++S +RKA TAG+F+H AR Y+T+ NQ V IHP+S+LF+
Sbjct: 774 LMQRVEIDMVSCLPETVNVRKAATAGYFYHVARLSKGGHYKTIKHNQTVMIHPNSSLFEE 833
Query: 1103 QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
P WV+YHELV T+KEYMR+V I+ KWL+++AP ++K A + S K+ ++
Sbjct: 834 LPRWVLYHELVFTSKEYMRQVIEIESKWLLEVAPHYYK-AKELEDSTNKKMPKV 886
Score = 40 (19.1 bits), Expect = 2.9e-209, Sum P(2) = 2.9e-209
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 354 SSPEKWEAKQLIAS 367
S +KWEA+QL ++
Sbjct: 177 SEQKKWEAEQLASA 190
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 2006 (711.2 bits), Expect = 3.6e-209, Sum P(2) = 3.6e-209
Identities = 370/655 (56%), Positives = 501/655 (76%)
Query: 500 DAFGKALTFGQRSKLS-IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 558
DA K+ +++ L +QE R+SLPIY + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 380 DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439
Query: 559 YLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 618
YL EAGYT RGK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT TV+KY
Sbjct: 440 YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499
Query: 619 MTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATL 678
MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500 MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559
Query: 679 DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFL 738
DAEKFS YF IF+ PGR +PVEI YT PE+DY+DA+++T+L IH+ EP GDIL+F
Sbjct: 560 DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619
Query: 739 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 798
TGQEEI+ A + L R++GLG + ELII P+Y+ LPSE+Q++IF+P P G RKVV+ATN
Sbjct: 620 TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAE SLTIDGI YV+DPGF+K YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680 IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYT Y N++ ++PE+QR NL L +K++GI+DL++FDFMDPP +AL+ ++E
Sbjct: 740 RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799
Query: 919 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFY 977
L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S CSDEI++I AM+ G +IFY
Sbjct: 800 LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859
Query: 978 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1036
RP++KQ AD R F GDH+ LL VY +WK NFS WC+EN++Q RS++RA+D+
Sbjct: 860 RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919
Query: 1037 RKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1096
R QL ++++ ++D+ S +RK+I AGFF H A+ YRT+ Q V+IHP+
Sbjct: 920 RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979
Query: 1097 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRK 1151
S L Q P WV+YHELV+T+KEYMR+VT + P+WL++LAP ++++ D + +K
Sbjct: 980 SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034
Score = 39 (18.8 bits), Expect = 3.6e-209, Sum P(2) = 3.6e-209
Identities = 16/63 (25%), Positives = 25/63 (39%)
Query: 7 DDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMP 66
DDG + E K ELE HL D +TE + ++ ++ + N E
Sbjct: 159 DDGSESEEERVRDQKEREELEQHLKDRDTARTRKLTE--QTLSKKEKEEAVRRANALEKD 216
Query: 67 DYF 69
D +
Sbjct: 217 DLY 219
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1920 (680.9 bits), Expect = 1.3e-203, Sum P(3) = 1.3e-203
Identities = 362/653 (55%), Positives = 495/653 (75%)
Query: 507 TFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 566
T ++ K+SI+E R+SLP+Y + I+AV ++QVL++ GETGSGKTTQ+ QYL EAG+
Sbjct: 348 TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFC 407
Query: 567 TRGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 625
GK IGCTQPRRVAAMSVA RVA+E GC+LG +VGY+IRFEDCT TV+KYMTDGMLL
Sbjct: 408 EGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
RE L + +L+ YSV+M+DEAHERT+HTD+LFGL+K + + R DL+L+++SATLDAEKFS
Sbjct: 468 REFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS 527
Query: 686 YFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEI 744
+F + IF IPGR FPV+I YT+ PE+DY+DA+++T++QIHLT+P GDIL+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ ++L ER K LG + ELI LPVY+ LPS++Q++IF+P P RKVV+ATNIAE S+
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSV 647
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TIDGI YVIDPGF+KQN ++ + G++ L + IS+A+A QRAGRAGRTGPGKC+RLYT
Sbjct: 648 TIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAW 707
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
AY++E+ IPEIQR NLG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGA
Sbjct: 708 AYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGA 767
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ-TGNIFYRPREKQ 983
L+ G LTKLGR+MAEFP DP +SKM++AS CS+EI+TI AM+ +FYRP+ +
Sbjct: 768 LNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQV 827
Query: 984 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1043
AD R F+ P GDH+TL+ VY W+ +FS WC EN+VQ R+++RA+DVR QL+ +
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGL 887
Query: 1044 MDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1103
+++ +++ S+ KIRKAITAG+F++ ++ D Y+T+ + HP+S LF+
Sbjct: 888 LERVEIETKSSTDTI-KIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEET 946
Query: 1104 PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADPT--KMSKRK 1151
P WV+Y ELV T+KE+MRE++ I+ WL+++AP ++K + D T KM K K
Sbjct: 947 PRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNK 999
Score = 47 (21.6 bits), Expect = 1.3e-203, Sum P(3) = 1.3e-203
Identities = 7/38 (18%), Positives = 21/38 (55%)
Query: 25 ELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENG 62
+L + +G D+ + +++ L + ++ + KL++ G
Sbjct: 10 QLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAG 47
Score = 42 (19.8 bits), Expect = 1.3e-203, Sum P(3) = 1.3e-203
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 358 KWEAKQLIASGV-LSVEDYPMYDEE 381
KWE +QL+AS + L +D ++E
Sbjct: 297 KWEEEQLMASMLHLGAKDAKRKEQE 321
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 1920 (680.9 bits), Expect = 1.3e-203, Sum P(3) = 1.3e-203
Identities = 362/653 (55%), Positives = 495/653 (75%)
Query: 507 TFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 566
T ++ K+SI+E R+SLP+Y + I+AV ++QVL++ GETGSGKTTQ+ QYL EAG+
Sbjct: 348 TEAEKKKMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFC 407
Query: 567 TRGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 625
GK IGCTQPRRVAAMSVA RVA+E GC+LG +VGY+IRFEDCT TV+KYMTDGMLL
Sbjct: 408 EGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLL 467
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
RE L + +L+ YSV+M+DEAHERT+HTD+LFGL+K + + R DL+L+++SATLDAEKFS
Sbjct: 468 REFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSS 527
Query: 686 YFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEI 744
+F + IF IPGR FPV+I YT+ PE+DY+DA+++T++QIHLT+P GDIL+FLTGQEEI
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEI 587
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ ++L ER K LG + ELI LPVY+ LPS++Q++IF+P P RKVV+ATNIAE S+
Sbjct: 588 ETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSV 647
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TIDGI YVIDPGF+KQN ++ + G++ L + IS+A+A QRAGRAGRTGPGKC+RLYT
Sbjct: 648 TIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAW 707
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
AY++E+ IPEIQR NLG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGA
Sbjct: 708 AYKHELEEQPIPEIQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGA 767
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ-TGNIFYRPREKQ 983
L+ G LTKLGR+MAEFP DP +SKM++AS CS+EI+TI AM+ +FYRP+ +
Sbjct: 768 LNHRGELTKLGRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQV 827
Query: 984 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSI 1043
AD R F+ P GDH+TL+ VY W+ +FS WC EN+VQ R+++RA+DVR QL+ +
Sbjct: 828 IHADSARKGFWSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGL 887
Query: 1044 MDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1103
+++ +++ S+ KIRKAITAG+F++ ++ D Y+T+ + HP+S LF+
Sbjct: 888 LERVEIETKSSTDTI-KIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEET 946
Query: 1104 PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK---VADPT--KMSKRK 1151
P WV+Y ELV T+KE+MRE++ I+ WL+++AP ++K + D T KM K K
Sbjct: 947 PRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNK 999
Score = 47 (21.6 bits), Expect = 1.3e-203, Sum P(3) = 1.3e-203
Identities = 7/38 (18%), Positives = 21/38 (55%)
Query: 25 ELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENG 62
+L + +G D+ + +++ L + ++ + KL++ G
Sbjct: 10 QLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAG 47
Score = 42 (19.8 bits), Expect = 1.3e-203, Sum P(3) = 1.3e-203
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 358 KWEAKQLIASGV-LSVEDYPMYDEE 381
KWE +QL+AS + L +D ++E
Sbjct: 297 KWEEEQLMASMLHLGAKDAKRKEQE 321
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 1953 (692.5 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 356/638 (55%), Positives = 486/638 (76%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 575
+QE R++LPIY + +L+ AV D+QVL+++GETGSGKTTQ+ QYL EAGYT GK+GCTQ
Sbjct: 397 LQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQ 456
Query: 576 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLS 635
PRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT T++KYMTDGMLLRE+L + +L
Sbjct: 457 PRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLG 516
Query: 636 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTI 695
YSVI++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAEKFS +F IF
Sbjct: 517 SYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRF 576
Query: 696 PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 755
PGR +PV+I +T PE+DY+DA++ TVL IH+ EP GD+L+FL GQEEI+ ++L ++
Sbjct: 577 PGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKI 636
Query: 756 KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 815
+GLG + ELII P+Y+ LPSE+Q++IF+P P G RKVV+ATNIAE SLTIDGI YV+DP
Sbjct: 637 RGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDP 696
Query: 816 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI 875
GF+K YNP+ G++SL++TPIS+ASA QR GRAGRT PGKCYRLYT Y N++ ++
Sbjct: 697 GFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTV 756
Query: 876 PEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLG 935
PEIQR NL L++K++GI++LL+FDFMDPP +ALI ++E L++LGAL++ G LTK G
Sbjct: 757 PEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALNQLGELTKAG 816
Query: 936 RKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQADQKRAKFF 994
R+MAEFPLDP LSKM++ S CSDEI++I AM+ G +IFYRP++KQ AD F
Sbjct: 817 RRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFH 876
Query: 995 QPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS 1053
GDH+ L +Y +WK N+S WC+EN++Q RS++RA+D+R QL ++++ ++DV S
Sbjct: 877 VGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSS 936
Query: 1054 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELV 1113
IRK+I AGFF H A+ YRT+ Q V+IHP+S L Q P WV+YH+LV
Sbjct: 937 NANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLV 996
Query: 1114 MTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRK 1151
+T+KEYMR+VT + P+WL+++AP ++++ D + +K
Sbjct: 997 LTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034
Score = 38 (18.4 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENG 62
V +L LGF + +++ + + ++ E +L E G
Sbjct: 10 VSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECG 50
Score = 38 (18.4 bits), Expect = 1.9e-203, Sum P(2) = 1.9e-203
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 7 DDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEF 54
DDG + E + ELE HL D +TE + + +EF
Sbjct: 160 DDGTESEEERLRDQREREELEQHLRERDTARTRKLTEPKMSKKEQEEF 207
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 1921 (681.3 bits), Expect = 3.4e-203, Sum P(3) = 3.4e-203
Identities = 348/653 (53%), Positives = 494/653 (75%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCT 574
+I+EQR+ LPI+ + +L++ + +N V++++GETGSGKTTQ+ QYL E GY+ GKIGCT
Sbjct: 651 TIKEQREFLPIFGCRNDLMKIIRENNVIIIVGETGSGKTTQLVQYLYEDGYSKFGKIGCT 710
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
QPRRVAA+SVAKRV+EE LG EVGY+IRFEDCT +T IKYMTDG+LLRE D NL
Sbjct: 711 QPRRVAAVSVAKRVSEEMSVTLGNEVGYSIRFEDCTSNETAIKYMTDGILLRESFNDPNL 770
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
+YS I++DEAHER+++TDVLFG+LK+++ RR D++LIVTSAT+D++KFS +F + +FT
Sbjct: 771 DKYSAIIMDEAHERSLNTDVLFGILKKVMSRRYDMKLIVTSATMDSKKFSMFFGDVPVFT 830
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
IPGRTFPV++L++K P DY+D+++ +L IH+T+ GDIL+F+TGQE+I+ C ++ ER
Sbjct: 831 IPGRTFPVDVLWSKTPCEDYVDSAVKQILSIHVTQGVGDILVFMTGQEDIETTCATVEER 890
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVID 814
+K LG P L +LP+YS LPS+MQ++IF+ A G RK ++ATNIAE SLT+DGI YVID
Sbjct: 891 IKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVID 950
Query: 815 PGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS 874
G+ K VYNP+ G+DSL +TPIS+A+A QR+GRAGRTGPG+CYRLYTESA++ E+ +
Sbjct: 951 TGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNN 1010
Query: 875 IPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKL 934
IPEIQR NLG L +K+MG+ +LL FDFMDPP ++++M QL+ LGALD++G +T L
Sbjct: 1011 IPEIQRTNLGNVVLNLKSMGVKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPL 1070
Query: 935 GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFF 994
G++M+EFPLDPPLSKM++ + LGC +I+TI++M+ ++FYRP+ + ++D R KFF
Sbjct: 1071 GKRMSEFPLDPPLSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKFF 1130
Query: 995 QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSA 1054
PE DHLTLL VY+ WK N+S WC E+++ +++R+ ++VR QLL IM ++ + V S
Sbjct: 1131 VPESDHLTLLHVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESC 1190
Query: 1055 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHEL 1112
G N+ IRKAIT+ +F H+A+ Y + P ++HP+SAL+ PD+++YHEL
Sbjct: 1191 GSNWDIIRKAITSSYFHHSAKIKGIGEYVNMRNGMPCFLHPTSALYGLGYAPDYIVYHEL 1250
Query: 1113 VMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1165
VMT+KEYM+ VT +DP WL ++ P FF + K KRK ++P+ D+ ++
Sbjct: 1251 VMTSKEYMQIVTAVDPNWLAEMGPMFFSIKKSLKDKKRK----LDPIKDKIND 1299
Score = 45 (20.9 bits), Expect = 3.4e-203, Sum P(3) = 3.4e-203
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 196 RYDNKYGDRENDDSGDRSGRYRGNE 220
R D++ +RE+ DRS YR E
Sbjct: 269 RRDDRSSNREDYKRDDRSSSYRRGE 293
Score = 40 (19.1 bits), Expect = 1.1e-202, Sum P(3) = 1.1e-202
Identities = 16/73 (21%), Positives = 29/73 (39%)
Query: 203 DRENDDSGDRSGRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGKEGLVHVSQIATR- 261
DR N+D + Y N+ ++ + ++ T ++ ND+ S R
Sbjct: 159 DRFNNDDDSNNDNYNDNDESSFKKPEKHYRQIKSTP--IRSNDYERNSSSSSSSSYDRRD 216
Query: 262 -RIGNAKDVVKRD 273
R N +D +RD
Sbjct: 217 DRSSN-RDDYRRD 228
Score = 39 (18.8 bits), Expect = 3.4e-203, Sum P(3) = 3.4e-203
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 358 KWEAKQLIASGVL 370
+WE +L+ SGV+
Sbjct: 486 RWETNRLMQSGVI 498
Score = 38 (18.4 bits), Expect = 1.9e-202, Sum P(3) = 1.9e-202
Identities = 18/83 (21%), Positives = 32/83 (38%)
Query: 263 IGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNNPSGT 322
I + D VK+ S SG++ SLS T + PL + + + S
Sbjct: 62 IDDIYDKVKKSTNKNESNNSSSGERTSLSFTKDTSTTTQSNQPLAETMKGGLITRKNSTN 121
Query: 323 RDG----PTTRMGLSGIRIVEED 341
D P + + G+ I+ ++
Sbjct: 122 NDEQFKIPQVKKSVLGLDILAKE 144
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 1929 (684.1 bits), Expect = 3.1e-201, Sum P(2) = 3.1e-201
Identities = 367/643 (57%), Positives = 488/643 (75%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG-KIGC 573
+I++ R+ LPIY+ + ++IQAVHD+QVL+++GETGSGKTTQ+ QYL EAGYT G K+GC
Sbjct: 473 TIEDTRKKLPIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQLPQYLHEAGYTKNGMKVGC 532
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
TQPRRVAAMSVA RVAEE G +LG EVGY+IRFED T TV+KYMTDGMLLRE+L + +
Sbjct: 533 TQPRRVAAMSVAARVAEEMGVKLGNEVGYSIRFEDNTSDKTVLKYMTDGMLLRELLTEPD 592
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
L QYS +M+DEAHERT+ TD+ GLLK + K RPDL+L+++SAT+DA+KF YF N IF
Sbjct: 593 LGQYSALMIDEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQSYFDNAPIF 652
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYE 753
IPGR + V+I YT+QPE++YL A++ TV QIH+++ GDIL+FLTGQEEI+ A QSL E
Sbjct: 653 NIPGRMYNVDIHYTQQPEANYLAAAITTVFQIHVSQGPGDILVFLTGQEEIEAAEQSLQE 712
Query: 754 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 813
+ LG +PE+II P+Y+ LPS++Q++IF+P PP RKVV+ATNIAE SLTIDGI YVI
Sbjct: 713 TARKLGNKIPEMIICPIYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVI 772
Query: 814 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 873
DPGF K+NV+NP+ G++SLV+TP S+ASA QRAGRAGR GPGKC+RLYT+ AY NE+ +
Sbjct: 773 DPGFVKENVFNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEES 832
Query: 874 SIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK 933
+ PEIQR NL L +K++GI+ LL FDFMDPP + +I A+EQLY+LGAL++ G LTK
Sbjct: 833 TTPEIQRTNLSSVILMLKSLGIDQLLEFDFMDPPPAETIIRALEQLYALGALNDRGELTK 892
Query: 934 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGNIFYRPREKQAQADQKRAK 992
+GR+MAEFP DP L+K +LA+ GC +E+L+I++M+ + +F+RP++K+ AD R +
Sbjct: 893 IGRQMAEFPTDPMLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNR 952
Query: 993 FFQPEG-DHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV 1051
F +G DHLTLL ++ W +FS W ENF+Q RSL RA+DVR QL + D+ ++ V
Sbjct: 953 FTVKDGGDHLTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTV 1012
Query: 1052 MSAGKN-FTKIRKAITAGFFFHAAR-KDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
S G N I+KAITAGFF +AAR + + YRT+ Q VY+HPSS LF+ P WVIY
Sbjct: 1013 SSCGSNNIVPIQKAITAGFFPNAARLQRGGDSYRTIKTGQTVYLHPSSTLFEVNPRWVIY 1072
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
ELV+T+KEYMR + +WLV++AP ++K D + K+
Sbjct: 1073 FELVLTSKEYMRSNMPLQAEWLVEVAPHYYKKKDLETLGTEKK 1115
Score = 41 (19.5 bits), Expect = 3.1e-201, Sum P(2) = 3.1e-201
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 310 SEDDALGN--NPSGTRDGPTTRMGLSG--IRIVEEDGV 343
SE A+ N SG RDG T G R+++ D V
Sbjct: 68 SETSAITNAGTGSGNRDGKTVAAGTEKKKYRLLDMDEV 105
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 1913 (678.5 bits), Expect = 1.3e-200, Sum P(2) = 1.3e-200
Identities = 356/646 (55%), Positives = 498/646 (77%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGC 573
S++ R+SLP+Y+ K +L++A+++ QVL+++ ETGSGKTTQ+ Q+L EAGYT K I C
Sbjct: 410 SLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICC 469
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
TQPRRVAAMSVA RVA+E RLG+EVGY+IRFE+ T TVIKY+TDGMLLRE L + +
Sbjct: 470 TQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPD 529
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
L+ YSVI++DEAHERT+HTD+LFGL+K + + RPDL+++++SAT+DAEKFS YF +F
Sbjct: 530 LASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVF 589
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYE 753
+PGR +PV+I YT QPE++Y+ A++ T+LQIH T+P GDIL+FLTGQ+EI+ +++ E
Sbjct: 590 YVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQE 649
Query: 754 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 813
+ LGK +PE+I+ P+Y+ LPSE+Q++IFDP PPG RKVV+ATNIAE S+TIDG+ +VI
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVI 709
Query: 814 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 873
D GF KQN+YNP+ G++SLV P S+ASA QRAGRAGR GPGKC+RLYT Y NE+
Sbjct: 710 DSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMV 769
Query: 874 SIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK 933
+ PEIQR NL L +K++GIN+LL FDFMD P P+ L+ ++E LY+LGAL+ G LTK
Sbjct: 770 TSPEIQRTNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTK 829
Query: 934 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGNIFYRPREKQAQADQKRAK 992
LGR+MAEFP DP LSK L+AS GC +E+L+I++M+ + ++FYRP++K +AD+ RA
Sbjct: 830 LGRQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARAN 889
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLD-V 1051
F QP GDHLTLL ++ W +FS W ENF+Q +SL RA+DVR QL ++ ++ +++ V
Sbjct: 890 FTQPGGDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELV 949
Query: 1052 MSAGKNFTKIRKAITAGFFFHAARKDPQ-EGYRTLVENQPVYIHPSSALFQRQPDWVIYH 1110
++ ++ I+KAITAG+F +AAR D + YRT+ NQ VYIHPSS++ +++P +IY
Sbjct: 950 TNSSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYF 1009
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK-RKRQER 1155
ELV+TTKEY R++T I P+WL++++P +FK + ++ K +KR +R
Sbjct: 1010 ELVLTTKEYCRQITEIQPEWLLEISPHYFKPENIEELQKTQKRHKR 1055
Score = 51 (23.0 bits), Expect = 1.3e-200, Sum P(2) = 1.3e-200
Identities = 27/100 (27%), Positives = 44/100 (44%)
Query: 473 PETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKEL 532
PE+ R LA ELR Y P ++ L +R I+++ Q KL +
Sbjct: 225 PESW-RKLASELRKKSRQQYLKPRAQQQ-----LEILRRE---IRDEEQLFAGEKLTQAE 275
Query: 533 IQAVHDNQVLVVIGETGSGKTTQVTQY-LAEAGYTTRGKI 571
I+ + + L+ I E Q T+Y + E +T +GK+
Sbjct: 276 IRELEKKKELLRIAEERQRLEKQATEYQMPEDYFTEQGKL 315
Score = 42 (19.8 bits), Expect = 1.2e-199, Sum P(2) = 1.2e-199
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 483 ELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQR 520
E V + A + W+ KAL F Q L E++
Sbjct: 335 EQNEVTMGAAEQQRWEAQQINKALLFDQNEWLPPGEKQ 372
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 1863 (660.9 bits), Expect = 7.3e-197, Sum P(3) = 7.3e-197
Identities = 349/655 (53%), Positives = 480/655 (73%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K ++ EQRQ LPI+ ++++L+ + DN +++V+GETGSGKTTQ+TQYL E GYT+ G +G
Sbjct: 553 KKTLLEQRQYLPIFAVRQQLLNIIRDNNIVIVVGETGSGKTTQLTQYLHEDGYTSYGMVG 612
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L +
Sbjct: 613 CTQPRRVAAMSVAKRVSEEMNSNLGEEVGYAIRFEDCTSEKTMIKYMTDGILLRESLRES 672
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS +++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+D++KF+ +F N I
Sbjct: 673 DLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFASFFGNVPI 732
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQIHL+ GDIL+F+ GQE+I+ +
Sbjct: 733 FHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEVTSDQIV 792
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
ER+ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 793 ERLADL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 851
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
+D G+ K V+NP+ G+D+L + PISQA+A QRAGRAGRTGPG+CYRLYT+SA++NEM
Sbjct: 852 VDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLT 911
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T+IPEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 912 TTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALT 971
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+ CS +IL I++M+ +IFYRP+ ++ ++DQ R K
Sbjct: 972 PTGRLMVEFPLDPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVREK 1031
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHLT L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + K++++
Sbjct: 1032 FSVPESDHLTYLNVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLI 1091
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ IRK I A +F AA+ Y + P ++HP+SALF PD++IYH
Sbjct: 1092 SCGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSALFGMGYTPDYIIYH 1151
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1165
ELVMTTKEYM+ VT +D +WL +L P F+ + K + R+ E + + E
Sbjct: 1152 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEITNMEEE 1206
Score = 43 (20.2 bits), Expect = 7.3e-197, Sum P(3) = 7.3e-197
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 404 ERWETNRMLTSGVV 417
Score = 39 (18.8 bits), Expect = 7.3e-197, Sum P(3) = 7.3e-197
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 199 NKYGDRENDDSGDRSGRYRGNEPE 222
N+ DRE+D DR R +E E
Sbjct: 155 NRSRDREHDRHRDRERRKDRDERE 178
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 1856 (658.4 bits), Expect = 6.5e-196, Sum P(3) = 6.5e-196
Identities = 351/647 (54%), Positives = 475/647 (73%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 581
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L +
Sbjct: 582 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREA 641
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DAEKF+ +F N I
Sbjct: 642 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPI 701
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ +
Sbjct: 702 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 761
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 762 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 820
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G+ K V+NP+ G+D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY+NE+
Sbjct: 821 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 880
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T++PEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 881 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 940
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R K
Sbjct: 941 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 1000
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHL+ L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ +
Sbjct: 1001 FAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 1060
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++YH
Sbjct: 1061 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 1120
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
ELVMTTKEYM+ VT +D +WL +L P F+ V K + R+ E
Sbjct: 1121 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKE 1167
Score = 43 (20.2 bits), Expect = 6.5e-196, Sum P(3) = 6.5e-196
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 375 ERWETNRMLTSGVV 388
Score = 37 (18.1 bits), Expect = 6.5e-196, Sum P(3) = 6.5e-196
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 198 DNKYGDRENDDSGDRSGR 215
D + + E+ D RSGR
Sbjct: 88 DQRDAEAEDSDQAGRSGR 105
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 1867 (662.3 bits), Expect = 2.3e-194, Sum P(2) = 2.3e-194
Identities = 357/650 (54%), Positives = 478/650 (73%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG 569
++ +LS+QE R+SLPIY + E + A+ Q+LV++GETGSGKTTQ+ QYL EAGYT G
Sbjct: 360 EKRQLSMQETRKSLPIYVYRDEFLAALEQYQILVIVGETGSGKTTQLPQYLHEAGYTKDG 419
Query: 570 -KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 628
++GCTQPRRVAAMSVA RVA+E G ++G EVGY+IRFED T T++KYMTDGMLLRE
Sbjct: 420 MRVGCTQPRRVAAMSVAARVADEMGVKVGNEVGYSIRFEDNTSDKTILKYMTDGMLLREF 479
Query: 629 LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFF 688
+ + +LS YS +M+DEAHERT+HTD+L L+K L + R DL+L+++SAT++AEKF+ YF
Sbjct: 480 MTEPDLSSYSALMIDEAHERTVHTDILLALVKDLARERKDLKLLISSATMNAEKFASYFD 539
Query: 689 NCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFAC 748
+ IF IPGR +PV+I YT PE++YL A++ TV QIH T+P+GDIL+FLTGQ+EI+ A
Sbjct: 540 DAPIFNIPGRRYPVDIYYTPAPEANYLSAAITTVFQIHTTQPKGDILIFLTGQDEIEAAE 599
Query: 749 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDG 808
+ E + LG V EL+I P+Y+ LPSE+QS+IF+P P RKVV+ATNIAE SLTIDG
Sbjct: 600 MQITETARKLGSRVKELVICPIYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDG 659
Query: 809 IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 868
I YVIDPG+ K+NVYNP G+ +LV+ P S+ASA QR+GRAGR GPGKC+RLYT+ AY N
Sbjct: 660 IVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMN 719
Query: 869 EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE 928
EM ++ PEIQR NL L +K++GIN+LL F+FMDPP +ALI A+ QL++L L+ +
Sbjct: 720 EMEESTTPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTEALIGALNQLFALQGLNHK 779
Query: 929 GLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQAD 987
G LTKLGR+MAEFP DP L+K +LA+ GC +E+L+I+AM+ + +F+RP++KQ AD
Sbjct: 780 GELTKLGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHAD 839
Query: 988 QKRAKFFQPEG-DHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDK 1046
R +F EG DH+TLL ++ W ++S W ENF+Q RSL RA+DVR+QL + ++
Sbjct: 840 AARGRFTVKEGGDHVTLLNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCER 899
Query: 1047 YKLDVMSAG--KNFTKIRKAITAGFFFHAARKDPQ-EGYRTLVENQPVYIHPSSALFQRQ 1103
++ + + G N I++AITAGFF +AAR + YRT+ N VYIHPSS + Q
Sbjct: 900 VEVTLSTCGGISNMPPIKRAITAGFFPNAARMQRSGDSYRTVKNNTTVYIHPSSVMMQED 959
Query: 1104 PD--WVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRK 1151
P VIY+ELV TTKEYMR I+PKWL +LAP F K D + ++K
Sbjct: 960 PPPRMVIYYELVQTTKEYMRSCMPIEPKWLAELAPHFHKAKDIAALEEKK 1009
Score = 38 (18.4 bits), Expect = 2.3e-194, Sum P(2) = 2.3e-194
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 2 DPPASDDGLKKLEYFSLVSK 21
D P +DDG + E+ SK
Sbjct: 90 DEPLTDDGADEPEFEQSASK 109
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 1861 (660.2 bits), Expect = 3.0e-194, Sum P(2) = 3.0e-194
Identities = 352/647 (54%), Positives = 476/647 (73%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 581
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 582 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREA 641
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DAEKF+ +F N I
Sbjct: 642 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPI 701
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ +
Sbjct: 702 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 761
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 762 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 820
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G+ K V+NP+ G+D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY+NE+
Sbjct: 821 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 880
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T++PEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 881 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 940
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R K
Sbjct: 941 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 1000
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHLT L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ +
Sbjct: 1001 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 1060
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++YH
Sbjct: 1061 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 1120
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
ELVMTTKEYM+ VT +D +WL +L P F+ V K + R+ E
Sbjct: 1121 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKE 1167
Score = 43 (20.2 bits), Expect = 3.0e-194, Sum P(2) = 3.0e-194
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 375 ERWETNRMLTSGVV 388
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 1860 (659.8 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 351/647 (54%), Positives = 476/647 (73%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 521 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 580
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 581 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREA 640
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS +++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DAEKF+ +F N I
Sbjct: 641 DLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPI 700
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ +
Sbjct: 701 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 760
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 761 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 819
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G+ K V+NP+ G+D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY+NE+
Sbjct: 820 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 879
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T++PEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 880 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 939
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R K
Sbjct: 940 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 999
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHLT L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ +
Sbjct: 1000 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 1059
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++YH
Sbjct: 1060 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 1119
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
ELVMTTKEYM+ VT +D +WL +L P F+ V K + R+ E
Sbjct: 1120 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKE 1166
Score = 43 (20.2 bits), Expect = 3.8e-194, Sum P(2) = 3.8e-194
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 374 ERWETNRMLTSGVV 387
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 1826 (647.8 bits), Expect = 5.1e-194, Sum P(3) = 5.1e-194
Identities = 345/663 (52%), Positives = 480/663 (72%)
Query: 499 KDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 558
+D GK+ F + K +I EQR+ LP++ ++EL+ + +N V++++GETGSGKTTQ+TQ
Sbjct: 513 QDTGGKS-DFSR--KKTISEQRRFLPVFASRQELLNVIRENSVIIIVGETGSGKTTQLTQ 569
Query: 559 YLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 618
YL E GY+ RG IGCTQPRRVAAMSVAKRV++E +LGE+VGYAIRFEDCT TVIKY
Sbjct: 570 YLHEDGYSKRGMIGCTQPRRVAAMSVAKRVSDEMDTQLGEDVGYAIRFEDCTSERTVIKY 629
Query: 619 MTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATL 678
MTDG+LLRE L D L YS I++DEAHER++ TDVLFGLL+++V RR DL+LIVTSAT+
Sbjct: 630 MTDGILLRESLRDPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARRHDLKLIVTSATM 689
Query: 679 DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFL 738
D+ KF+ +F N FTIPGRTFPV+++++K DY+++++ LQ+HLT EGD+L+F+
Sbjct: 690 DSSKFATFFGNVPTFTIPGRTFPVDVMFSKNTCEDYVESAVKQALQVHLTPNEGDMLIFM 749
Query: 739 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 798
GQE+I+ C+ L ER+ + N P L ILP+YS LPS++Q++IF + G RK VVATN
Sbjct: 750 PGQEDIEVTCEVLEERLAEID-NAPALSILPIYSQLPSDLQAKIFQKSSDGLRKCVVATN 808
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAE SLT+DGI YVID G+ K VYNP+ G+D+L I PISQA+A QR+GRAGRTGPG+ Y
Sbjct: 809 IAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQAY 868
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYT+ Y++E+ ++PEIQR NL T L +K++G+ DLL F FMDPP +++++ Q
Sbjct: 869 RLYTQRQYKDELLALTVPEIQRTNLANTVLLLKSLGVVDLLQFHFMDPPPQDNILNSLYQ 928
Query: 919 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR 978
L+ LGALD G LT LGR+MAEFPLDPP +ML+ + +GCS E+L I++M+ +IFYR
Sbjct: 929 LWILGALDHTGALTTLGRQMAEFPLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYR 988
Query: 979 PREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRK 1038
P+ ++ +AD R KF +PE DHLT L VY+ W+ N+S WC E+F+ +++R+ ++VR+
Sbjct: 989 PKGREDEADGVREKFQRPESDHLTYLNVYQQWRQNNYSSTWCNEHFIHIKAMRKVREVRQ 1048
Query: 1039 QLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA 1098
QL IM + L V+S G ++ +RK I + +F+ AAR Y L P ++HP+SA
Sbjct: 1049 QLKDIMTQQNLSVISCGIDWDIVRKCICSAYFYQAARLKGIGEYVNLRTGMPCHLHPTSA 1108
Query: 1099 LFQ--RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
L+ PD+V+YHEL+MT KEYM+ T +D WL +L P FF V + + + K+++
Sbjct: 1109 LYGLGTTPDYVVYHELIMTAKEYMQCATAVDGYWLAELGPMFFSVKESGRSGREKKKQAA 1168
Query: 1157 EPL 1159
E L
Sbjct: 1169 EHL 1171
Score = 47 (21.6 bits), Expect = 5.1e-194, Sum P(3) = 5.1e-194
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 198 DNKYGDRENDDSGDRSGRYRGNEPELYQVYKGRVS 232
D Y D N G S +R E +L Q R+S
Sbjct: 329 DEGYDDENNPFGGPNSEYFRKREEQLEQKRTKRIS 363
Score = 45 (20.9 bits), Expect = 5.1e-194, Sum P(3) = 5.1e-194
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 357 EKWEAKQLIASGV---LSVEDYPMYDEE 381
E WE +++ SGV +SV D +DEE
Sbjct: 374 ELWERNRMLTSGVVTLISVNDD--FDEE 399
Score = 41 (19.5 bits), Expect = 2.2e-193, Sum P(3) = 2.2e-193
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 193 TARRYDNKYGDRENDDSGDRSGRYRGNE 220
T RR+ NK GD G R R ++
Sbjct: 252 TPRRHGNKSGDWSVRSGGSRRNHGRQDD 279
Score = 38 (18.4 bits), Expect = 2.8e-193, Sum P(3) = 2.8e-193
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 286 QKLSLSMRDVDQNTGKDLLPLKKISE 311
QK + MRD D D K ISE
Sbjct: 504 QKFADHMRDQDTGGKSDFSRKKTISE 529
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 1855 (658.1 bits), Expect = 1.3e-193, Sum P(2) = 1.3e-193
Identities = 350/647 (54%), Positives = 476/647 (73%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL + GYT G IG
Sbjct: 523 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHQDGYTDYGMIG 582
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G LGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 583 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREA 642
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DA+KF+ +F N I
Sbjct: 643 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDADKFAAFFGNVPI 702
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ +
Sbjct: 703 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 762
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 763 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 821
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G+ K V+NP+ G+D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY+NE+
Sbjct: 822 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 881
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T++PEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 882 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 941
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R K
Sbjct: 942 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 1001
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHLT L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ +
Sbjct: 1002 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 1061
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++YH
Sbjct: 1062 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 1121
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
ELVMTTKEYM+ VT +D +WL +L P F+ V K + R+ E
Sbjct: 1122 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKE 1168
Score = 43 (20.2 bits), Expect = 1.3e-193, Sum P(2) = 1.3e-193
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 376 ERWETNRMLTSGVV 389
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 1862 (660.5 bits), Expect = 3.6e-192, P = 3.6e-192
Identities = 377/823 (45%), Positives = 546/823 (66%)
Query: 338 VEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLSVEDYPMYDEEGDGXXXXXXXXXXXXX 397
++ + P+ R KR + WE +++ SGV D+ DG
Sbjct: 11 LKSSNLPPALRDAKRKDI-DNWETNRMLTSGVAQRRDF-------DGDFLPEDEEGTRVH 62
Query: 398 XXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXXXXXXXXXXXXIKXXXXXX-----XXX 452
FL G+T ++ + PV ++P+ ++
Sbjct: 63 LLVHDLRPPFLDGRTIFTKQLEPVSAVRDPQSDMAVFSRKGSRVVRDRRQQRERQKQAQE 122
Query: 453 XXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRS 512
T+ + +L ED + + +G A+ M K+D G++ +F +S
Sbjct: 123 ATTVAGTALGNLMGVKEDEGDTAVAMPVEEVYKGGNKFAHHMK--KQDEGGQS-SFS-KS 178
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K +++EQR+ LP + ++++L++ + DNQV+VV+GETGSGKTTQ+TQ+L E GY G IG
Sbjct: 179 K-TLREQREFLPAFAVREDLLRVIRDNQVVVVVGETGSGKTTQLTQFLYEDGYAKFGMIG 237
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE LG+ VGYAIRFEDCTGP+T IKYMTDG+LLRE L+
Sbjct: 238 CTQPRRVAAMSVAKRVSEEMEVDLGDLVGYAIRFEDCTGPNTAIKYMTDGVLLRESLVQT 297
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L +YS I++DEAHER ++TDVL GLLK+++ RR DL+LIVTSAT++AE+FS +F
Sbjct: 298 DLDKYSCIIMDEAHERALNTDVLMGLLKKILARRRDLKLIVTSATMNAERFSRFFGGAPE 357
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV++ +++ P DY+D+++ VL IH+++ GDIL+F+TGQE+I+ C+ +
Sbjct: 358 FIIPGRTFPVDVHFSRTPCEDYVDSAVKQVLAIHVSQGPGDILVFMTGQEDIEATCELVD 417
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
ER+K L + P+L ILP+YS +P+E Q++IF+ A PG RKV+VATNIAE SLT+DGI +V
Sbjct: 418 ERLKLLN-DPPKLSILPIYSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFV 476
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
+D G++K VYNPK G+D+L ITPISQA+A QR+GRAGRTGPGK YRLYTE AY+NEM
Sbjct: 477 VDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYL 536
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
+IPEIQR +L T L +K++G+ DLL FDFMDPP + + +++ +L+SLGALD G LT
Sbjct: 537 QTIPEIQRTSLSNTVLLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLT 596
Query: 933 KLGRKMAEFPLDPPLSKMLLASVD-LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRA 991
LGR+M FP+DPPL+K+++ + + GCS+E+LTI++M+ N+FYRP+E+Q ++D R
Sbjct: 597 HLGRQMTPFPMDPPLAKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAARE 656
Query: 992 KFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV 1051
KFF PE DHLTLL VY WK+ +S WC ++F+ +++LRRA++VR QL IM KL +
Sbjct: 657 KFFVPESDHLTLLHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQKLPL 716
Query: 1052 MSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ--PDWVIY 1109
+S G ++ +IRK I +GF+ AAR + L + + +HP+SAL+ P++V+Y
Sbjct: 717 ISCGTDWDEIRKCICSGFYHQAARVKGIGEFINLRTSVSMALHPTSALYGLGYVPEYVVY 776
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
HEL++T+KEYM VT +DP WL +L F+ V + + +R
Sbjct: 777 HELILTSKEYMSTVTAVDPHWLAELGGVFYSVKEKGYSHRERR 819
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 1842 (653.5 bits), Expect = 3.9e-192, Sum P(2) = 3.9e-192
Identities = 347/663 (52%), Positives = 489/663 (73%)
Query: 505 ALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAG 564
A F Q SI+EQR+ LP + ++++L++ + DNQV++V+GETGSGKTTQ+TQ+L E G
Sbjct: 287 ASNFSQTK--SIREQREFLPAFAVREDLMRVIRDNQVIIVVGETGSGKTTQLTQFLYEDG 344
Query: 565 YTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 624
Y G IGCTQPRRVAAMSVAKRV+EE +LG VGYAIRFEDCT DTVIKYMTDG+L
Sbjct: 345 YGQLGMIGCTQPRRVAAMSVAKRVSEEMEVKLGGTVGYAIRFEDCTSKDTVIKYMTDGVL 404
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LRE L + +L +YS I++DEAHER ++TDVL GL K++++RR DL+LIVTSAT++A++FS
Sbjct: 405 LRESLNEPDLDRYSCIIMDEAHERALNTDVLMGLFKKILQRRRDLKLIVTSATMNAKRFS 464
Query: 685 GYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
+F FTIPGRTFPV++++++ P DY+D ++ VL IH++ GDIL+F+TGQE+I
Sbjct: 465 DFFGGAPDFTIPGRTFPVDVMFSRSPVEDYVDQAVQQVLNIHVSMGTGDILVFMTGQEDI 524
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ C+ + ER+ L + P+L ILP+YS +P+++Q++IFD APPG RK +VATNIAE SL
Sbjct: 525 EVTCELVRERLDALN-DPPKLSILPIYSQMPADLQAKIFDRAPPGVRKCIVATNIAETSL 583
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
T+DGI YV+D G++K VYNPK G+D+L ITPISQA+A QR+GRAGRTGPGK +RL+TE
Sbjct: 584 TVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRTGPGKAFRLFTEK 643
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
A+++E+ +IPEIQR NL T L +K++G+ D+L FDFMDPP + +++ L++LGA
Sbjct: 644 AFKDELYIQTIPEIQRTNLSNTILLIKSLGVKDMLDFDFMDPPPQDTMTTSLFDLWALGA 703
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA 984
LD G +T LGRKM FP+DPPL+K+++ + + GC++E++TI++M+ N+FYRP+E+Q
Sbjct: 704 LDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQE 763
Query: 985 QADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
++D R KFF PE DHLT L VY WKA S WC +F+ S+SLRRA++VR QLL IM
Sbjct: 764 ESDAAREKFFVPESDHLTFLHVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIM 823
Query: 1045 DKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ- 1103
K+D++S G ++ +R+ I +G++ AA+ Y L + V +HP+SAL+
Sbjct: 824 KTQKMDIVSCGTDWDVVRRCICSGYYHQAAKVKGIGEYINLRTSVTVQLHPTSALYGLGF 883
Query: 1104 -PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDR 1162
PD+V+YHEL++T+KEYM VT +DP WL DL F+ V + ++ KR +E ++R
Sbjct: 884 LPDYVVYHELILTSKEYMSTVTSVDPMWLADLGGVFYSVKEKGYSARDKRV--VETEFNR 941
Query: 1163 YHE 1165
E
Sbjct: 942 KME 944
Score = 42 (19.8 bits), Expect = 3.9e-192, Sum P(2) = 3.9e-192
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 346 SRRPLKRMSSPEKWEAKQLIASGVLSVED 374
S R ++ + WE +++ SGV D
Sbjct: 129 SARAQQKQRDIDAWETNRMLTSGVAQRRD 157
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 1860 (659.8 bits), Expect = 5.9e-192, P = 5.9e-192
Identities = 352/647 (54%), Positives = 475/647 (73%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 61 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 120
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L +
Sbjct: 121 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREA 180
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DAEKF+ +F N I
Sbjct: 181 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPI 240
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ +
Sbjct: 241 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 300
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 301 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 359
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G+ K V+NP+ G+D+L I PISQA+A QR+GRAGRTGPG+C+RLYT+SAY+NE+
Sbjct: 360 IDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLT 419
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T++PEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 420 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 479
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R K
Sbjct: 480 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 539
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHLT L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ +
Sbjct: 540 FAVPESDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 599
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++YH
Sbjct: 600 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 659
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
ELVMTTKEYM+ VT +D +WL +L P F+ V K + R+ E
Sbjct: 660 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKE 706
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1819 (645.4 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 334/645 (51%), Positives = 471/645 (73%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCT 574
SI++QR+ LP++ +++++ + +N V++++GETGSGKTTQ+ QYL E G+ G IGCT
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCT 492
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
QPRRVAAMSVA+RVA+E G LG++VGYAIRFEDCT T+IKYMTDG+LLRE L D +L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFF-NCNIF 693
QYS I++DEAHER+++TDVLFGLL++++ +R DL+LIVTSAT+DA+KF+ +F NC F
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTF 612
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYE 753
TIPGRTFPVE+ + + P DY+DA++ + IHL +GDIL+F+ GQE+I+ C+ + E
Sbjct: 613 TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKE 672
Query: 754 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 813
++ L + P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +VI
Sbjct: 673 KLGELDE-APPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVI 731
Query: 814 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 873
DPGF K VYNP+ G+D+L I P+SQASA QR GRAGRTGPG+CYRLYTE +++E+ +
Sbjct: 732 DPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKS 791
Query: 874 SIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK 933
++PEIQR NL L +K++G++DLL F FMD P ++++M QL++LGALD G LT
Sbjct: 792 TVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTP 851
Query: 934 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKF 993
+GRKM EFPLDP LSKML+ S ++GCSDE+LTI++M+ IF+RP+ ++ +AD K+ KF
Sbjct: 852 MGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKF 911
Query: 994 FQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS 1053
PE DHLT L VY W+ +S WC +N++ ++L++ ++VR QL IM KL ++S
Sbjct: 912 QVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLIS 971
Query: 1054 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHE 1111
G + +RK I + +F +AAR Y + P ++HP+SALF PD+V+YHE
Sbjct: 972 NGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHE 1031
Query: 1112 LVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
L+MT KEYM+ VT +D WL +L P F+ + + + K + E +
Sbjct: 1032 LIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESV 1076
Score = 44 (20.5 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 347 RRPLKRMSSPEKWEAKQLIASGVLSVEDY--PMYDEEGD 383
++ +KR + E WE +L SGV+++ D ++++E D
Sbjct: 275 QQAIKREN--ELWENNRLHRSGVVAMADELSSIFEDETD 311
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 1819 (645.4 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 334/645 (51%), Positives = 471/645 (73%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCT 574
SI++QR+ LP++ +++++ + +N V++++GETGSGKTTQ+ QYL E G+ G IGCT
Sbjct: 433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCT 492
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
QPRRVAAMSVA+RVA+E G LG++VGYAIRFEDCT T+IKYMTDG+LLRE L D +L
Sbjct: 493 QPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSL 552
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFF-NCNIF 693
QYS I++DEAHER+++TDVLFGLL++++ +R DL+LIVTSAT+DA+KF+ +F NC F
Sbjct: 553 DQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTF 612
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYE 753
TIPGRTFPVE+ + + P DY+DA++ + IHL +GDIL+F+ GQE+I+ C+ + E
Sbjct: 613 TIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKE 672
Query: 754 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 813
++ L + P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +VI
Sbjct: 673 KLGELDE-APPLAVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVI 731
Query: 814 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 873
DPGF K VYNP+ G+D+L I P+SQASA QR GRAGRTGPG+CYRLYTE +++E+ +
Sbjct: 732 DPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKS 791
Query: 874 SIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK 933
++PEIQR NL L +K++G++DLL F FMD P ++++M QL++LGALD G LT
Sbjct: 792 TVPEIQRTNLANVVLLLKSLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTP 851
Query: 934 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKF 993
+GRKM EFPLDP LSKML+ S ++GCSDE+LTI++M+ IF+RP+ ++ +AD K+ KF
Sbjct: 852 MGRKMVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKF 911
Query: 994 FQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS 1053
PE DHLT L VY W+ +S WC +N++ ++L++ ++VR QL IM KL ++S
Sbjct: 912 QVPESDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLIS 971
Query: 1054 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHE 1111
G + +RK I + +F +AAR Y + P ++HP+SALF PD+V+YHE
Sbjct: 972 NGSEWDIVRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHE 1031
Query: 1112 LVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
L+MT KEYM+ VT +D WL +L P F+ + + + K + E +
Sbjct: 1032 LIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKELKMESV 1076
Score = 44 (20.5 bits), Expect = 6.4e-190, Sum P(2) = 6.4e-190
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 347 RRPLKRMSSPEKWEAKQLIASGVLSVEDY--PMYDEEGD 383
++ +KR + E WE +L SGV+++ D ++++E D
Sbjct: 275 QQAIKREN--ELWENNRLHRSGVVAMADELSSIFEDETD 311
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 1802 (639.4 bits), Expect = 8.2e-186, P = 8.2e-186
Identities = 359/692 (51%), Positives = 492/692 (71%)
Query: 503 GKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE 562
GKA + QR I E+R+ LP++ K + + ++ NQ L+++GETGSGKTTQ+ Q++ +
Sbjct: 48 GKA--YSQRY-FEILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLD 104
Query: 563 A---GYTTRGK---IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVI 616
A + +G+ +GCTQPRRVAAMSV++RVA+E +GEEVGY+IRFEDCT T++
Sbjct: 105 AVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTML 164
Query: 617 KYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSA 676
KY+TDGMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK++++ RPDL+L+V SA
Sbjct: 165 KYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSA 224
Query: 677 TLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILL 736
TL+AEKF YF + +PGR PVEI YT++PE DYL+A++ TV+QIH+ EP GDIL+
Sbjct: 225 TLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILV 284
Query: 737 FLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP-------PG 789
FLTG+EEI+ AC+ + + + LG V + ++P+YS LP MQ +IFDPAP P
Sbjct: 285 FLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPA 344
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
RK+VV+TNIAE SLTIDGI YVIDPGFAKQ VYNP+ ++SL+++PIS+ASA QR+GRA
Sbjct: 345 GRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRA 404
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GRT PGKC+RLYTE ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP+P
Sbjct: 405 GRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAP 464
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 969
+ L+ A+E L LGALD+EG LTK G M+EFPLDP +SKML+ S + CS+EIL++ AM
Sbjct: 465 ETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAM 524
Query: 970 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1029
+ N F RPRE Q AD+ +A+F +GDHLTLL VY A+K N WCFENFV +R+
Sbjct: 525 LSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRA 584
Query: 1030 LRRAQDVRKQLLSIMDKYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTL 1085
++ A +VR+QL+ IM ++ L + S N + IRKA+ AG+F A + Y T+
Sbjct: 585 MKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTV 644
Query: 1086 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD-P 1144
+NQ V++HPS+ L +P+WVIY+E V+TT+ ++R VT I +WLVD+A ++ +++ P
Sbjct: 645 KDNQVVHLHPSNCL-DHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFP 703
Query: 1145 TKMSKRKRQERIEPLYD-RYHEPNSWRLSKRR 1175
+KR +E LY R E N SK R
Sbjct: 704 NCEAKRA----LEKLYKKREREKNE---SKNR 728
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 1799 (638.3 bits), Expect = 1.7e-185, P = 1.7e-185
Identities = 353/673 (52%), Positives = 489/673 (72%)
Query: 508 FGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA--GY 565
+ QR I E+R++LP++ K+E ++ +++NQ L+++GETGSGKTTQ+ Q++ +A
Sbjct: 47 YSQRY-YDILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAE 105
Query: 566 TT--RGK--IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
T+ R K +GCTQPRRVAAMSV++RVAEE +GEEVGY+IRFEDC+ P TV+KY+TD
Sbjct: 106 TSDKRRKWLVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTD 165
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
GMLLRE + D L +Y VI+LDEAHERT+ TDVLFGLLK+++K RPDL+L+V SATL+AE
Sbjct: 166 GMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 225
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQ 741
KF YF + +PGR PVEI YT++PE DYL+A++ TV+QIH+ EP GDIL+FLTG+
Sbjct: 226 KFQDYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGE 285
Query: 742 EEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP-------PGKRKVV 794
EEI+ AC+ + + + LG V + ++P+YS LP MQ +IFDPAP P RK+V
Sbjct: 286 EEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIV 345
Query: 795 VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGP 854
V+TNIAE SLTIDGI YVIDPGFAKQ VYNP+ ++SL+++PIS+ASA QR+GRAGRT P
Sbjct: 346 VSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRP 405
Query: 855 GKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALIS 914
GKC+RLYTE ++ N++ P + PEI R NL T LT+K +GI+DL+ FDFMDPP+P+ L+
Sbjct: 406 GKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 465
Query: 915 AMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN 974
A+E L LGALD++G LTK G M+EFPLDP ++KML+ S + CS+EIL++ AM+ N
Sbjct: 466 ALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPN 525
Query: 975 IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQ 1034
F RPRE Q AD+ +A+F EGDHLTLL VY A+K N WC+ENF+ +R+++ A
Sbjct: 526 CFIRPREAQKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSAD 585
Query: 1035 DVRKQLLSIMDKYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQP 1090
+VR+QL+ IM ++ L + S N + IRKA+ AG+F A + Y T+ +NQ
Sbjct: 586 NVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQV 645
Query: 1091 VYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD-PTKMSK 1149
V++HPS+ L +P+WVIY+E V+T++ ++R VT I +WLVD+A ++ +++ P +K
Sbjct: 646 VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAK 704
Query: 1150 RKRQERIEPLYDR 1162
R IE LY +
Sbjct: 705 RV----IEKLYKK 713
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 1774 (629.5 bits), Expect = 7.6e-185, Sum P(2) = 7.6e-185
Identities = 332/635 (52%), Positives = 473/635 (74%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R+K S +EQR+ LP + ++++L+ + DNQVL+V+GETGSGKTTQ+ Q+L E GY G
Sbjct: 481 RTK-SYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGM 539
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
IGCTQPRRVAAMSVAKRV+EE G RLG VGY+IRFED TGPDTVIKYMTDG+LLRE L+
Sbjct: 540 IGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLM 599
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
+NL +YSVI++DEAHER+++TD+L GLLK+++ RR D++L+VTSAT++++KFS +F
Sbjct: 600 QNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGA 659
Query: 691 NIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
FTIPGRT+PV+I++ K P SDY++A++ VLQIHL++P GDIL+F+TGQE+I+ C+
Sbjct: 660 PQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEI 719
Query: 751 LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIF 810
+ +R+ L + P L ILP+YS +P+++Q++IFD A PG RKVVVATNIAE SLT+ GI
Sbjct: 720 IADRLNQL-HDAPRLSILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGIS 778
Query: 811 YVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEM 870
YV+D G+ K +YN K G+D+L +TPISQA+A QRAGRAGRTGPG YRLYTE AY EM
Sbjct: 779 YVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREM 838
Query: 871 SPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGL 930
T++PEIQR NL T L +K++G+ ++ FDFMD P L++++ +L++LGALD G
Sbjct: 839 FETTLPEIQRTNLSNTVLILKSLGVEEISDFDFMDRPPNDTLMASLYELWTLGALDNFGK 898
Query: 931 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKR 990
LT LG+KM+ FP+DP LSK+++ + D C++EI+TI++M+ ++FYRP+E+ ++D R
Sbjct: 899 LTTLGKKMSLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAR 958
Query: 991 AKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLD 1050
KF PE DHL LL +Y+ W+ +S WC ++F+ S++L+RA+D+R+QL+ IM K K+
Sbjct: 959 EKFNVPESDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKIS 1018
Query: 1051 VMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ--PDWVI 1108
+ S ++ +R+ + + +F AA Y L P ++H +S+L+ PD+VI
Sbjct: 1019 LESVS-DWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVI 1077
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD 1143
YHELV+T+KEYM VT +DP WL + ++ V +
Sbjct: 1078 YHELVLTSKEYMNIVTSVDPYWLAEFGGVYYSVKE 1112
Score = 41 (19.5 bits), Expect = 7.6e-185, Sum P(2) = 7.6e-185
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 352 RMSSPEKWEAKQLIASGVLSV----EDYPMYDE 380
R WE ++I SGV DY + +E
Sbjct: 337 RFKENSMWEKNRMITSGVSKAPGLESDYSLMEE 369
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 1728 (613.3 bits), Expect = 1.0e-182, Sum P(3) = 1.0e-182
Identities = 342/656 (52%), Positives = 464/656 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ----YLAEAGYTTRGKI 571
I ++R LP+++ K+ + +Q V++GETGSGKTTQ+ Q Y+ RG +
Sbjct: 97 ILKKRLQLPVWEYKERFTDILIRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRG-V 155
Query: 572 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 631
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 156 ACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMND 215
Query: 632 DNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCN 691
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC
Sbjct: 216 PLLERYGVIILDEAHERTLATDILMGVLKEVVRQRADLKVIVMSATLDAGKFQIYFDNCP 275
Query: 692 IFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQS 750
+ TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+
Sbjct: 276 LLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKR 335
Query: 751 LYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASL 804
+ + LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SL
Sbjct: 336 IKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSL 395
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TIDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE
Sbjct: 396 TIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEK 455
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
AY+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L A
Sbjct: 456 AYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAA 515
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA 984
L+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 516 LNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKK 575
Query: 985 QADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IM
Sbjct: 576 AADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 635
Query: 1045 DKYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF 1100
D++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 636 DRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL- 694
Query: 1101 QRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 695 DHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 750
Score = 44 (20.5 bits), Expect = 1.0e-182, Sum P(3) = 1.0e-182
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 196 RYDNKYGDRENDDSGDRSGRYRGNEPEL 223
R D K DR+ D DR R R E EL
Sbjct: 31 RDDRKDRDRDRDRDRDRD-REREKEKEL 57
Score = 39 (18.8 bits), Expect = 1.0e-182, Sum P(3) = 1.0e-182
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 351 KRMSSPEKWEAKQLIASGVLSVEDYPMYDEEGDG 384
KR+ P WE K+ ++ + + + E G G
Sbjct: 100 KRLQLPV-WEYKERFTDILIRHQSFVLVGETGSG 132
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 1748 (620.4 bits), Expect = 2.6e-182, Sum P(2) = 2.6e-182
Identities = 337/647 (52%), Positives = 457/647 (70%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 581
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L +
Sbjct: 582 CTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREA 641
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DAEKF+ +F N I
Sbjct: 642 DLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPI 701
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ +
Sbjct: 702 FHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIV 761
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L +N P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 762 EHLEEL-ENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 820
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G+ K V +P G L I I + G +G T P +C RLYT+SAY+NE+
Sbjct: 821 IDSGYCKLKVSSPSLGGSDLKIMEIQKIQKNINTGCSGCTSP-RCCRLYTQSAYKNELLT 879
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
T++PEIQR NL L +K++G+ DLL F FMDPP ++++M QL+ LGALD G LT
Sbjct: 880 TTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLT 939
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
GR M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R K
Sbjct: 940 STGRLMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREK 999
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
F PE DHL+ L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++ +
Sbjct: 1000 FAVPESDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLA 1059
Query: 1053 SAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYH 1110
S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++YH
Sbjct: 1060 SCGTDWDIVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYH 1119
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
ELVMTTKEYM+ VT +D +WL +L P F+ V K + R+ E
Sbjct: 1120 ELVMTTKEYMQCVTAVDGEWLAELGPMFYSVKQAGKSRQENRRRAKE 1166
Score = 43 (20.2 bits), Expect = 2.6e-182, Sum P(2) = 2.6e-182
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 375 ERWETNRMLTSGVV 388
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 1743 (618.6 bits), Expect = 1.5e-179, P = 1.5e-179
Identities = 336/650 (51%), Positives = 467/650 (71%)
Query: 508 FGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA--EAGY 565
F Q + I E R+ LP+Y+ ++E ++ H+NQ++V +GETGSGKTTQ+ Q++ E +
Sbjct: 61 FSQ-NYFKILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPH 119
Query: 566 TTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 625
T +I CTQPRRVAAMSVAKRVA+E LGEEVGY IRFEDC+GP+T++KYMTDGMLL
Sbjct: 120 LTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLL 179
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
RE + D LS+YS I+LDEAHERT+ TD+L GL+K+L RRPDL++IV SATLDA+KF
Sbjct: 180 REAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQK 239
Query: 686 YFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEID 745
YFF+ + +PGRT+PVEI YT++PE DYL+A+L TVLQIH+ E GDIL+FLTG+EEI+
Sbjct: 240 YFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIE 299
Query: 746 FACQSLYERMKGLGKN--VPELIILPVYSALPSEMQSRIFDPAPPGK-----RKVVVATN 798
AC+ + L + L + P+Y +LP Q RIF+P P RKVV++TN
Sbjct: 300 DACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTN 359
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAE SLTIDGI YV+DPGF+KQ +YNP+ ++SL+++PIS+ASA+QRAGRAGRT PGKC+
Sbjct: 360 IAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCF 419
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYTE A+R E+ + PEI R NL T L +K +GI+DL+ FD+MDPP+P+ ++ A+E+
Sbjct: 420 RLYTEEAFRKELIEQTYPEILRSNLSSTVLELKKLGIDDLVHFDYMDPPAPETMMRALEE 479
Query: 919 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR 978
L L LD+ G LT LGRK +EFPLDP L+ ML+ S + CS+E+L++ A++ N+F R
Sbjct: 480 LNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVR 539
Query: 979 PREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRK 1038
P + AD+ R +F P+GDHLTLL VY A+K+ + WC+ +F+ R+L A +VRK
Sbjct: 540 PNSARKLADEMRQQFTHPDGDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRK 599
Query: 1039 QLLSIMDKYKLDVMSA---GKNF-TKIRKAITAGFFFHAARKDPQ-EGYRTLVENQPVYI 1093
QL M++ +++++S KN+ IR+A+ +GFF A+K + Y T+ +NQ V +
Sbjct: 600 QLRRTMERQEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSL 659
Query: 1094 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD 1143
HPS L P+WV+Y+E V+TTK ++R VT I P+WL++LAP ++ + D
Sbjct: 660 HPSCGL-SVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDD 708
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 1742 (618.3 bits), Expect = 1.9e-179, P = 1.9e-179
Identities = 345/666 (51%), Positives = 475/666 (71%)
Query: 508 FGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 567
+ QR + ++ ++R +LP+++ + + ++ + +Q +V++GETGSGKTTQ+ Q+ + +
Sbjct: 58 YSQRYQ-NLYKKRIALPVFEYQADFMRLLSLHQCIVLVGETGSGKTTQIPQWCVDFAVSK 116
Query: 568 RGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
K + CTQPRRVAAMSVA+RV+EE +LGEEVGY+IRFEDC+ T++KYMTDGMLLR
Sbjct: 117 GRKGVSCTQPRRVAAMSVAQRVSEEMDVKLGEEVGYSIRFEDCSTAKTLLKYMTDGMLLR 176
Query: 627 EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
E + D L QY VI+LDEAHERT+ TD+L G+LK+++++R DL+L+V SATLDA KF Y
Sbjct: 177 EAMSDPMLDQYQVILLDEAHERTLATDILMGVLKEVIRQRSDLKLVVMSATLDAGKFQQY 236
Query: 687 FFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEID 745
F N + +PGRT PVEI YT +PE DYL+A++ TV+QIH+ E EGDIL+FLTGQEEI+
Sbjct: 237 FDNAPLMKVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIEGDILMFLTGQEEIE 296
Query: 746 FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNI 799
AC+ + + LG + EL +P+YS LP +Q RIF+PAPP RKVVV+TNI
Sbjct: 297 EACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNI 356
Query: 800 AEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYR 859
AE SLTIDG+ +VIDPGFAKQ VYNP+ ++SL+++PIS+ASA+QR+GRAGRT PGKC+R
Sbjct: 357 AETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFR 416
Query: 860 LYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQL 919
LYTE A++NEM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L
Sbjct: 417 LYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELL 476
Query: 920 YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP 979
L ALD++G LT LG M+EFPLDP L+KML+AS CS+EIL+I AM+ F RP
Sbjct: 477 NYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRP 536
Query: 980 REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
E + AD+ + +F +GDHLTLL VY A+K + WC+ENF+ RSL+ A +VR+Q
Sbjct: 537 NEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQ 596
Query: 1040 LLSIMDKYKLDVMSA---GKNF-TKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHP 1095
L IMD++ L S K++ IRKA+ GFF A + Y T+ +NQ V +HP
Sbjct: 597 LARIMDRFNLRRTSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGYYLTIKDNQNVQLHP 656
Query: 1096 SSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD-PTKMSKRKR-- 1152
S+ L +PDWVIY+E V+TTK Y+R VT + P+WL LAP+++ + + P +KR+
Sbjct: 657 STCL-DHKPDWVIYNEFVLTTKNYIRTVTDVKPEWLCCLAPQYYDLNNFPQCEAKRQLEL 715
Query: 1153 -QERIE 1157
Q+R+E
Sbjct: 716 LQQRLE 721
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 1740 (617.6 bits), Expect = 3.0e-179, P = 3.0e-179
Identities = 341/655 (52%), Positives = 469/655 (71%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K+ ++ +Q V++GETGSGKTTQ+ Q+ + + G +
Sbjct: 104 ILKKRLQLPVWEYKERFNDILNRHQSFVLVGETGSGKTTQIPQWCVDMVRSLPGPKRGVA 163
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 164 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 223
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 224 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDNCPL 283
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E EGD+LLFLTGQEEID AC+ +
Sbjct: 284 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRI 343
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG +V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 344 KREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLT 403
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 404 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 463
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 464 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 523
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 524 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNEVLSITAMLSVPQCFVRPTEAKKA 583
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 584 ADESKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 643
Query: 1046 KYKLDVMSA---GKNF-TKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S +++ IR+A+ GFF A + Y T+ +NQ V +HPS+ L
Sbjct: 644 RFNLPRRSTEFTSRDYYINIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 702
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++++++ + +++ ERI
Sbjct: 703 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYEMSNFPQCEAKRQLERI 757
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 341/655 (52%), Positives = 463/655 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K + +Q V++GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 1046 KYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 728
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 341/655 (52%), Positives = 463/655 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K + +Q V++GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 1046 KYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 728
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 341/655 (52%), Positives = 463/655 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K + +Q V++GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 1046 KYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 728
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 341/655 (52%), Positives = 463/655 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K + +Q V++GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 1046 KYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 728
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 341/655 (52%), Positives = 463/655 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K + +Q V++GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 1046 KYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 728
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 1728 (613.3 bits), Expect = 5.7e-178, P = 5.7e-178
Identities = 341/655 (52%), Positives = 463/655 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IG 572
I ++R LP+++ K + +Q V++GETGSGKTTQ+ Q+ E + G +
Sbjct: 130 ILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVA 189
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFEDC+ T++KYMTDGMLLRE + D
Sbjct: 190 CTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDP 249
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L +Y VI+LDEAHERT+ TD+L G+LK++V++R DL++IV SATLDA KF YF NC +
Sbjct: 250 LLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPL 309
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSL 751
TIPGRT PVEI YT +PE DYL+A++ TV+QIH+ E E GD+LLFLTGQEEID AC+ +
Sbjct: 310 LTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRI 369
Query: 752 YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNIAEASLT 805
+ LG V ++ I+P+YS LP + Q RIF+P PP K RKVVV+TNIAE SLT
Sbjct: 370 KREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLT 429
Query: 806 IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 865
IDG+ +VIDPGFAKQ VYNP+ ++SL++T IS+ASA+QRAGRAGRT PGKC+RLYTE A
Sbjct: 430 IDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKA 489
Query: 866 YRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 925
Y+ EM + PEI R NLG L +K +GI+DL+ FDFMDPP+P+ L+ A+E L L AL
Sbjct: 490 YKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAAL 549
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+++G LT+LG MAEFPLDP L+KM++AS D CS+E+L+I AM+ F RP E +
Sbjct: 550 NDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKA 609
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
AD+ + +F +GDHLTLL VY A+K + S WC++NF+ RSL A +VR+QL IMD
Sbjct: 610 ADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMD 669
Query: 1046 KYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ L S + IRKA+ G+F A + Y T+ +NQ V +HPS+ L
Sbjct: 670 RFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVL-D 728
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
+P+WV+Y+E V+TTK Y+R T I P+WLV +AP+++ +++ + +++ +RI
Sbjct: 729 HKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 1695 (601.7 bits), Expect = 8.3e-177, Sum P(2) = 8.3e-177
Identities = 337/648 (52%), Positives = 465/648 (71%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQY--LAEAGYTTRGKIG 572
SI + R+ LP++ + E +Q +Q+LV +GETGSGKTTQ+ Q+ L + T R I
Sbjct: 91 SILKTRRDLPVHAQRDEFLQLYQQSQILVFVGETGSGKTTQIPQFVLLDDLPQTQRKMIA 150
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVA+RVA E LGEEVGY+IRFED T P T++KYMTDGMLLRE + D
Sbjct: 151 CTQPRRVAAMSVAQRVAAELDVTLGEEVGYSIRFEDMTSPKTLLKYMTDGMLLREAMNDH 210
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
LS+YS I+LDEAHERT+ TDVL GLLK++V+RRPDL++I+ SATLDA+KF YF + +
Sbjct: 211 ELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRRPDLKIIIMSATLDAQKFQRYFNDAPL 270
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSL- 751
+PGRT PVEI YT +PE DY++A++ TVLQIH TE EGDILLFLTG+EEI+ A + +
Sbjct: 271 LAVPGRTHPVEIFYTPEPEQDYVEAAIRTVLQIHATEDEGDILLFLTGEEEIEDAARKIS 330
Query: 752 YERMKGLGK-NVPELIILPVYSALPSEMQSRIFDPAPP-----GK--RKVVVATNIAEAS 803
E + + + + L + +Y +LP MQ RIF+PAPP G+ RKV+V+TNIAE S
Sbjct: 331 LEGDEMIREADAGPLKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETS 390
Query: 804 LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 863
LTIDGI YV+DPGF+KQ +YNP+ ++SL+++PIS+ASA+QRAGRAGRT PGKC+RLYTE
Sbjct: 391 LTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTE 450
Query: 864 SAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 923
SA++ E+ + PEI R NL T L +K +GI+DL+ FD MDPP+P+ L+ A+E+L L
Sbjct: 451 SAFKKELIDQTYPEILRSNLSSTVLELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLA 510
Query: 924 ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQ 983
LD++G LT LGR +EFPLDP L+ ML++S + CS+EIL+I A++ IF RP ++
Sbjct: 511 CLDDDGNLTPLGRLASEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQR 570
Query: 984 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS-GP--WCFENFVQSRSLRRAQDVRKQL 1040
+AD+ + F P+GDHLTLL Y A+K+ P WC ++F+ RSL+ A +VR QL
Sbjct: 571 KRADEMKNLFAHPDGDHLTLLNAYHAFKSPEAQENPKQWCHDHFLSLRSLQSADNVRMQL 630
Query: 1041 LSIMDKYKLDVMSAG----KNFTKIRKAITAGFFFHAARKDPQ--EGYRTLVENQPVYIH 1094
L IM++ +L+++S K + IR+A+ AGFF A+K+ Q Y T+ ++Q V +H
Sbjct: 631 LRIMEREELEMISTSFEDKKYYENIRRALCAGFFMQVAKKENQGKSMYMTIKDHQNVLLH 690
Query: 1095 PSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVA 1142
PS+ L +WV+Y+E V+TTK Y+R VT + P+WL+D+AP ++ ++
Sbjct: 691 PSTVL-AHDAEWVLYNEFVLTTKNYIRTVTAVKPEWLIDIAPTYYDIS 737
Score = 44 (20.5 bits), Expect = 8.3e-177, Sum P(2) = 8.3e-177
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 195 RRYDNKYGDRENDDSGDRSGRYRGNEPELYQVY 227
RR D++ G R D+SG + P L +Y
Sbjct: 4 RRSDSEDGSRAKRQKMDKSGTDPRDNPYLAHMY 36
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 1700 (603.5 bits), Expect = 5.3e-175, P = 5.3e-175
Identities = 357/742 (48%), Positives = 500/742 (67%)
Query: 460 IPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRS---K-LS 515
I ++L++ P E H A E +G+ E +K GK F R K +
Sbjct: 26 IAEELSKQHPLPSEEPLVHHDAGEFKGLQRHHTSAEEAQKLEDGKINPFTGREFTPKYVD 85
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA--EAGYTTRGKIGC 573
I + R+ LP++ + E ++ +NQ++V +GETGSGKTTQ+ Q++ E + ++ C
Sbjct: 86 ILKIRRELPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVAC 145
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
TQPRRVAAMSVA+RVAEE +LGEEVGY+IRFE+ T T++KYMTDGMLLRE + D +
Sbjct: 146 TQPRRVAAMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHD 205
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
LS+YS I+LDEAHERT+ TD+L GLLKQ+VKRRPDL++I+ SATLDAEKF YF + +
Sbjct: 206 LSRYSCIILDEAHERTLATDILMGLLKQVVKRRPDLKIIIMSATLDAEKFQRYFNDAPLL 265
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSL-Y 752
+PGRT+PVE+ YT + + DYLD+++ TVLQIH TE GDILLFLTG++EI+ A + +
Sbjct: 266 AVPGRTYPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISL 325
Query: 753 E-----RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAP------PGKRKVVVATNIAE 801
E R +G G P L + P+Y +LP Q RIF+PAP PG RKVV++TNIAE
Sbjct: 326 EGDQLVREEGCG---P-LSVYPLYGSLPPHQQQRIFEPAPESHNGRPG-RKVVISTNIAE 380
Query: 802 ASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLY 861
SLTIDGI YV+DPGF+KQ VYNP+ ++SL+++PIS+ASA+QRAGRAGRT PGKC+RLY
Sbjct: 381 TSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLY 440
Query: 862 TESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYS 921
TE A++ E+ S PEI R NL T L +K +GI+DL+ FDFMDPP+P+ ++ A+E+L
Sbjct: 441 TEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNY 500
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPRE 981
L LD+EG LT LGR ++FPLDP L+ ML+ S + CS EILTI+AM+ N+F RP +
Sbjct: 501 LACLDDEGNLTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTK 560
Query: 982 KQAQADQKRAKFFQPEGDHLTLLAVYEAWK---AKNFS-GPWCFENFVQSRSLRRAQDVR 1037
+ +AD + F P+GDH+TLL VY A+K A + WC ++++ RSL A ++R
Sbjct: 561 DKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIR 620
Query: 1038 KQLLSIMDKYKLDVMSAG----KNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVY 1092
QL +M++Y L++ + K F IRKA+ +GFF A+K +GY T+ +NQ V
Sbjct: 621 SQLERLMNRYNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVKDNQDVL 680
Query: 1093 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
IHPS+ L +WVIY+E V+T+K Y+R VT + P+WL+++AP ++ +++ K +
Sbjct: 681 IHPSTVL-GHDAEWVIYNEFVLTSKNYIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLS 739
Query: 1153 QERIEPLYDRYHEPNSWRLSKR 1174
ERI+ DR +E + K+
Sbjct: 740 LERIKEKVDRLNELKQGKNKKK 761
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 1695 (601.7 bits), Expect = 1.8e-174, P = 1.8e-174
Identities = 339/664 (51%), Positives = 467/664 (70%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA--EAGYTTRGKIGC 573
I + R+ LP++ ++E ++ H Q++V +GETGSGKTTQ+ Q++ E + T ++ C
Sbjct: 87 ILKTRRDLPVHAQREEFLKIFHSTQIMVFVGETGSGKTTQIPQFVLYDEMPHLTGKQVAC 146
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
TQPRRVAAMSVA RVA+E LGEEVGY IRFE+ +GP T++KYMTDGMLLRE + D +
Sbjct: 147 TQPRRVAAMSVAARVADEMDVELGEEVGYNIRFENNSGPKTILKYMTDGMLLREAMEDHD 206
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
L++YS I+LDEAHERT+ TD+L GLLKQ+ RRPDL++I+ SATLDAEKF YF N +
Sbjct: 207 LTRYSCIILDEAHERTLATDILMGLLKQVSVRRPDLKIIIMSATLDAEKFQNYFNNAPLL 266
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYE 753
+PGRT PVEI YT + + DYLDA++ TVLQIH TE EGDILLFLTG+EEI+ AC+ +
Sbjct: 267 AVPGRTHPVEIYYTPEFQRDYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISL 326
Query: 754 RMKGLGK--NVPELIILPVYSALPSEMQSRIFDPAP--------PGKRKVVVATNIAEAS 803
L + N L + P+Y +LP Q +IF+PAP PG RKV+++TNIAE S
Sbjct: 327 EGDELVREQNCGPLKVYPLYGSLPPHQQQKIFEPAPTNPNPNGRPG-RKVIISTNIAETS 385
Query: 804 LTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTE 863
LTIDGI YV+DPGF+KQ VYNP+ ++SL+++PIS+ASA+QRAGRAGRT PGKC+RLYTE
Sbjct: 386 LTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTE 445
Query: 864 SAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLG 923
A++ E+ S PEI R NL T L +K +GI+DL+ FDFMDPP+P+ ++ A+E+L L
Sbjct: 446 EAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFDFMDPPAPETMMRALEELNYLQ 505
Query: 924 ALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQ 983
L +EG LT LGR ++FPLDP L+ ML+ S CS+EILTI+AM+ N+F RP +
Sbjct: 506 CLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPNVFVRPASAR 565
Query: 984 AQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS--GP--WCFENFVQSRSLRRAQDVRKQ 1039
+AD+ + F Q +GDHLTL+ VYEA+ + S G WC +NF+ RSL A++VR Q
Sbjct: 566 KRADEAKLSFAQADGDHLTLINVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQ 625
Query: 1040 LLSIMDKYKLDVMSAGKNFTK------IRKAITAGFFFHAARKDP-QEGYRTLVENQPVY 1092
L +M KY L ++S ++ ++KA+ AGFF A+K +GY T+ +NQ V
Sbjct: 626 LQRLMQKYDLQLISQYNQVSEFEYWENVKKALVAGFFMQVAKKKSGNKGYLTVKDNQDVL 685
Query: 1093 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
IHPS+ L ++ +W+IY+E V+T+K Y+R VTV+ P+WLV++AP+++ + K +
Sbjct: 686 IHPSTVL-SKEGEWLIYNEFVLTSKNYIRTVTVVKPEWLVEIAPKYYNLDHFAKGDVKLS 744
Query: 1153 QERI 1156
ER+
Sbjct: 745 LERV 748
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1676 (595.0 bits), Expect = 1.8e-172, P = 1.8e-172
Identities = 328/657 (49%), Positives = 460/657 (70%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE-AGYTTRGK--- 570
+I E+R LP+++ K++ ++ + +NQ + ++GETGSGKTTQ+ Q+ E +G+
Sbjct: 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query: 571 ----IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
+ CTQPRRVAAMSVA RVAEE LG+EVGY+IRFEDC TV+KY TDGMLLR
Sbjct: 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 627 EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
E + L +Y V++LDEAHERT+ TD+L GL+K++V+ R D+++++ SATLDA KF Y
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRY 247
Query: 687 FFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEID 745
F +C + ++PGRTFPVEI +T E DYL+A++ TV+QIH+ E EGDILLFLTGQEEI+
Sbjct: 248 FEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 746 FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNI 799
AC+ + ++ LG + L +P+YS LP Q RIF+PAPP + RK V++TNI
Sbjct: 308 EACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 800 AEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYR 859
AE SLTIDG+ +VIDPGF+KQ VYNP+ ++SL++ PIS+ASA QRAGRAGRT PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 860 LYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQL 919
LYTE+AY +EM + PEI R NLG L +K +G DL+ FDFMDPP+P+ L+ A+E L
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELL 487
Query: 920 YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP 979
L A++++G LT+LG MAEFPLDP L+KML+ S +L CS+EIL+I AM+ + RP
Sbjct: 488 NYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRP 547
Query: 980 REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
E + +AD+ +A+F +GDHLTLL VY ++K WC++NF+ R+++ A VR Q
Sbjct: 548 NEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQ 607
Query: 1040 LLSIMDKYKLDVMSAG-KN---FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHP 1095
L +MDKY L +S K+ + IRKA+ AGFF A + Y T+ +NQ V +HP
Sbjct: 608 LSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 1096 SSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD-PTKMSKRK 1151
S+ L +P+W +Y+E V+TTK ++R VT + P+WL+ +AP+++ + + P +KRK
Sbjct: 668 STVL-DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRK 723
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 1676 (595.0 bits), Expect = 1.8e-172, P = 1.8e-172
Identities = 328/657 (49%), Positives = 460/657 (70%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE-AGYTTRGK--- 570
+I E+R LP+++ K++ ++ + +NQ + ++GETGSGKTTQ+ Q+ E +G+
Sbjct: 68 AIWEKRSQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPG 127
Query: 571 ----IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
+ CTQPRRVAAMSVA RVAEE LG+EVGY+IRFEDC TV+KY TDGMLLR
Sbjct: 128 QARLVACTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLR 187
Query: 627 EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
E + L +Y V++LDEAHERT+ TD+L GL+K++V+ R D+++++ SATLDA KF Y
Sbjct: 188 EAMNSPLLDKYKVLILDEAHERTLATDILMGLIKEIVRNRADIKVVIMSATLDAGKFQRY 247
Query: 687 FFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEID 745
F +C + ++PGRTFPVEI +T E DYL+A++ TV+QIH+ E EGDILLFLTGQEEI+
Sbjct: 248 FEDCPLLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIE 307
Query: 746 FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK------RKVVVATNI 799
AC+ + ++ LG + L +P+YS LP Q RIF+PAPP + RK V++TNI
Sbjct: 308 EACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 800 AEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYR 859
AE SLTIDG+ +VIDPGF+KQ VYNP+ ++SL++ PIS+ASA QRAGRAGRT PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 860 LYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQL 919
LYTE+AY +EM + PEI R NLG L +K +G DL+ FDFMDPP+P+ L+ A+E L
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDLVHFDFMDPPAPETLMRALELL 487
Query: 920 YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP 979
L A++++G LT+LG MAEFPLDP L+KML+ S +L CS+EIL+I AM+ + RP
Sbjct: 488 NYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRP 547
Query: 980 REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
E + +AD+ +A+F +GDHLTLL VY ++K WC++NF+ R+++ A VR Q
Sbjct: 548 NEMRTEADEAKARFAHIDGDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQ 607
Query: 1040 LLSIMDKYKLDVMSAG-KN---FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHP 1095
L +MDKY L +S K+ + IRKA+ AGFF A + Y T+ +NQ V +HP
Sbjct: 608 LSRVMDKYNLRRVSTDFKSRDYYLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHP 667
Query: 1096 SSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVAD-PTKMSKRK 1151
S+ L +P+W +Y+E V+TTK ++R VT + P+WL+ +AP+++ + + P +KRK
Sbjct: 668 STVL-DHKPEWALYNEFVLTTKNFIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRK 723
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 1660 (589.4 bits), Expect = 9.1e-171, P = 9.1e-171
Identities = 331/663 (49%), Positives = 460/663 (69%)
Query: 504 KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 563
K TF +R I E+R+ LP++K K++ I+ + +NQV++++GETGSGKTTQ+ Q++ +A
Sbjct: 59 KKETFSKRY-YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDA 117
Query: 564 GYTTRGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDG 622
G GK +G TQPRRVAA+SVAKRV+EE LGEEVGY+IRFE+ + T +KY+TDG
Sbjct: 118 GLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDG 177
Query: 623 MLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEK 682
MLLRE + D L++Y VI+LDEAHERT+ TD+LFGL+K ++KRR DL+LIV SATL+A K
Sbjct: 178 MLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGK 237
Query: 683 FSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQE 742
F YF N + +PGR PVEI YT++ DYL++++ TV+ IH E GDIL+FLTG+E
Sbjct: 238 FQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEE 297
Query: 743 EIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEA 802
EI+ C + + G +P + LP+YS+LP QS+IFD +RK +V+TNIAE
Sbjct: 298 EIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCK--ERKCIVSTNIAET 353
Query: 803 SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYT 862
SLTIDGI +V+DPGF+KQ YNP+ ++SL++ PIS+ASA QRAGRAGRT PGKC+RLYT
Sbjct: 354 SLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYT 413
Query: 863 ESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSL 922
E A++ M + PEI R NL L + +G+ DL+ FDFMDPP P LI A+E L+ L
Sbjct: 414 EKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFDFMDPPVPDTLIRALEVLHYL 473
Query: 923 GALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREK 982
GALD+EG LT++G M+EFPLDP LSKML+ S + CS+EILTI AM+ N F RP++
Sbjct: 474 GALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDN 533
Query: 983 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-WCFENFVQSRSLRRAQDVRKQLL 1041
+ +AD + F +GDHLT+L VY ++K KN P WC++NF+ R++++A VR QL
Sbjct: 534 RIEADSAKKSFDHFDGDHLTMLNVYHSFK-KNGEDPTWCYDNFLNHRAIKQADSVRSQLA 592
Query: 1042 SIMDKYKLDVMSAGKN----FTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS 1097
I+ ++KL ++S N + I+K I AGFF A+ + + Y TL + Q V HPS+
Sbjct: 593 RILTRFKLPLVSGDVNSKFYYENIKKCIAAGFFMQVAKCEKKNIYFTLGDEQSVIFHPST 652
Query: 1098 ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
L R+P++ IY+E V+T++ Y+R +T + WL++LAP +FK K +K Q R +
Sbjct: 653 GL-TRRPEFCIYNEFVLTSENYIRTITDVKFDWLLELAPSYFKQKSFPKKTKETIQ-RAQ 710
Query: 1158 PLY 1160
LY
Sbjct: 711 RLY 713
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 1305 (464.4 bits), Expect = 1.0e-169, Sum P(2) = 1.0e-169
Identities = 267/514 (51%), Positives = 358/514 (69%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR----GK- 570
IQ+QR+SLP + ++ +L+ + DNQV +VIGETGSGKTTQ+TQ+L E G+ G+
Sbjct: 351 IQQQRKSLPAFAVRNDLLTTIRDNQVTIVIGETGSGKTTQLTQFLYEDGFGANIDKNGEK 410
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGMLLRE 627
I CTQPRRVAAMSVAKRV+EE C+LGEEVGY+IRFED T TVIKYMT+G+LLRE
Sbjct: 411 RIIACTQPRRVAAMSVAKRVSEEMNCKLGEEVGYSIRFEDKTDNKKTVIKYMTEGILLRE 470
Query: 628 ILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF 687
IL D L+ YS I++DEAHER+++TD+L GL K L+ +R DL+LIVTSAT++A +F+ +F
Sbjct: 471 ILADPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRKDLKLIVTSATMNANRFTKFF 530
Query: 688 FNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHL--------TEPEGDILLFLT 739
F IPGRTFPVE+ + + DY++ ++ VL IHL +GDIL+F+T
Sbjct: 531 GVAPQFHIPGRTFPVEVFFNRDVNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMT 590
Query: 740 GQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNI 799
GQE+I+ C + E++ L ++ P L I P+YS +P ++Q +IF+ +RKVVVATNI
Sbjct: 591 GQEDIEITCDLIKEKLNLL-EDPPPLDIFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNI 649
Query: 800 AEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYR 859
AE SLT+DGI YVID G K VYNPK G+D+L + PIS A+A QR+GRAGRTG G YR
Sbjct: 650 AETSLTVDGIKYVIDCGLVKVKVYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYR 709
Query: 860 LYTESAYR-NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
LYTE A + M IPEIQR NL L +K++ +ND+ SF F+DPP L ++
Sbjct: 710 LYTEKATEPDSMYVQPIPEIQRSNLSNIMLLLKSLKVNDINSFPFLDPPPKDLLNCSLYD 769
Query: 919 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASV--DLGCSDEILTIIAMIQTGNIF 976
L+++GALD G LTKLG M +FP++P L+K++L S + CS+E++TI+AM+ NIF
Sbjct: 770 LWAIGALDNLGELTKLGHSMTQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIF 829
Query: 977 YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW 1010
RP+E+ +AD R KF E DHLTLL V+ W
Sbjct: 830 NRPKERANEADMAREKFIISESDHLTLLNVFNQW 863
Score = 367 (134.2 bits), Expect = 1.0e-169, Sum P(2) = 1.0e-169
Identities = 85/210 (40%), Positives = 121/210 (57%)
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
+L + CS+E++TI+AM+ NIF RP+E+ +AD R KF E DHLTLL V+
Sbjct: 803 LLSTQPEFHCSEEVVTIVAMLSVPNIFNRPKERANEADMAREKFIISESDHLTLLNVFNQ 862
Query: 1010 WKAK--NFSGP------WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKI 1061
W F G WC +NF+Q +SL RA+D++ QL+ IM K KL ++ + K I
Sbjct: 863 WNINLNKFKGNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKS-KTDDDI 921
Query: 1062 RKAITAGFFFHAAR--KDPQEGYRTLVENQPVY----IHPSSALFQRQ--PDWVIYHELV 1113
RK + A F+ +A+ K G V + Y +HP+S+L ++VIYHELV
Sbjct: 922 RKCLCASFYQQSAKLTKMNLNGQPEFVNLRHSYMKMFLHPTSSLLDSNLSTNYVIYHELV 981
Query: 1114 MTTKEYMREVTVIDPKWLVDLAPRFFKVAD 1143
+T KEYM VT +DP WL++ +FF VAD
Sbjct: 982 LTKKEYMNCVTTVDPIWLLEYGYKFFGVAD 1011
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 1642 (583.1 bits), Expect = 7.4e-169, P = 7.4e-169
Identities = 331/700 (47%), Positives = 473/700 (67%)
Query: 499 KDAFGKALTFGQRSK--LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQV 556
+DA A T G S+ I + R++LP+++ ++E + H Q++V +GETGSGKTTQ+
Sbjct: 81 EDADTNAFTGGSHSQQYFKILKTRRNLPVHQHRQEFLDVYHKTQIMVFVGETGSGKTTQI 140
Query: 557 TQYLA--EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 614
QY+ E + + + CTQPRRVAAMSVA+RVA+E LG+EVGY+IRFE+ T P T
Sbjct: 141 PQYVLYDELPHLNKKMVACTQPRRVAAMSVAQRVADELDVELGQEVGYSIRFENKTTPST 200
Query: 615 VIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVT 674
++KYMTDG LLRE + D N+++YS I++DEAHERT+ TD+L LLKQL RR DL++I+
Sbjct: 201 ILKYMTDGQLLRETIHDPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRSDLKIIIM 260
Query: 675 SATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDI 734
SATLDA KF YFF I +PGRT PVEI YT + E DY++AS+ TVLQIH TE EGDI
Sbjct: 261 SATLDAAKFQRYFFEAPILAVPGRTHPVEIFYTAEAERDYIEASVRTVLQIHATEAEGDI 320
Query: 735 LLFLTGQEEIDFACQSLYERMKGLGKNVP--ELIILPVYSALPSEMQSRIFDPAPP---- 788
LLFLTG+EEI+ C+ + + L ++ + + P+Y LP + Q +IF+ APP
Sbjct: 321 LLFLTGEEEIEDVCRKVRLEVDELIRDADCGPMEVYPLYGTLPPQQQQKIFNAAPPPLKK 380
Query: 789 -GK--RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 845
G+ RK +VATNIAE SLTIDGI YV+DPGF+KQ +YN + ++SL++TPIS+ASA+QR
Sbjct: 381 GGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIYNARIRVESLLVTPISRASAQQR 440
Query: 846 AGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMD 905
AGRAGRT PGKC+RLYTE+A++ E+ + PEI R NL T L +K +G++DL+ FDFMD
Sbjct: 441 AGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNLSNTILELKKLGVDDLVHFDFMD 500
Query: 906 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 965
PP+P+ ++ A+E+L L L+++G LT LG +E+PLDP L+ ML++S + CS+E+L+
Sbjct: 501 PPAPETMMRALEELNYLSCLNDDGDLTDLGHMASEYPLDPALAVMLVSSPEFYCSNEMLS 560
Query: 966 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP----WCF 1021
+ +++ +F RP + +AD+ + F EGDHLTLL Y A+K++ G WC
Sbjct: 561 VTSLLSVPQVFMRPANNRKRADEMKEHFKHMEGDHLTLLNAYHAFKSEMAKGTDMKKWCH 620
Query: 1022 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSA---GKNF-TKIRKAITAGFFFHAA-RK 1076
E+F+ R L A +VR QL IM++ L+++S KN+ T IR+ + AGFF A R+
Sbjct: 621 EHFLSYRHLSSADNVRAQLKGIMERQDLELVSTPFTDKNYYTNIRRCLVAGFFMQVALRE 680
Query: 1077 DPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
+ Y T+ +NQ V +HPSS L +WV+YHE V+T+K+Y+R VT I P+WL+D+AP
Sbjct: 681 TSGKVYHTIKDNQNVMLHPSSVL-TTDYEWVLYHEFVLTSKQYIRTVTGIRPEWLIDIAP 739
Query: 1137 RFFKVAD-PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1175
++ + + +KR + +E + R + S RR
Sbjct: 740 NYYDLDNFEDDQAKRALKSVVEKMKRREASRGAQGASSRR 779
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
Identities = 329/689 (47%), Positives = 471/689 (68%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + G + + + LSI++QRQ LP++KL+ ++ V + Q +V++
Sbjct: 17 GPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQV QYLAEAG+T G++ G TQPRRVAA++VA RVA+E G LG EVGY I
Sbjct: 77 GETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE+++D L++YSV+MLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
K+R DLRLIV SATLDAEKF FFN C I T+ GRTFPV+I Y + P
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPELIILPV 770
DY+ A++ TV++IH TE +GDIL FLTGQEE++ L E+ + L + L +LP+
Sbjct: 256 DYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGR GR GKCYRLYTE A+ ++ +++PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFE-QLPQSTVPEMQRSNLAPVVLQL 434
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+ +L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q N+F P +++QA + KF EGDHLT+L VYEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEA 554
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N S WC E+F+ + L RA VR QL ++ K+++ MS+ + + + I +GF
Sbjct: 555 FIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGF 614
Query: 1070 FFHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMREVTVIDP 1128
F +AAR YRT+ ++ ++IHP+S L+ ++ P WVIY+E++ T+K YMR+VT I+
Sbjct: 615 FANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674
Query: 1129 KWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
WL++LAP F++ T +S + ++ +++
Sbjct: 675 AWLLELAPHFYQQG--THLSLKAKRAKVQ 701
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
Identities = 333/671 (49%), Positives = 465/671 (69%)
Query: 512 SKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-RGK 570
SK I+ ++ LP+++ + +L+ + +NQV+V+IGETGSGKTTQ+ QYL E GY RGK
Sbjct: 339 SKDDIKHTKEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGK 398
Query: 571 -IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMTDGMLLREI 628
I TQPRRVAA+SVAKRVA E LG+EVGY+IRFED T + T +K++TDG+LLRE
Sbjct: 399 SIVVTQPRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRET 458
Query: 629 LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFF 688
L+DD L +YS +++DEAHER+++TD+L G K L+ RR DL+LI+TSAT++A+KFS +F
Sbjct: 459 LLDDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFG 518
Query: 689 NCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP--EGDILLFLTGQEEIDF 746
N FTIPGRTFPV+ +YT P DY++A++ ++IHL GDIL+F+TGQE+I+
Sbjct: 519 NAPQFTIPGRTFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIET 578
Query: 747 ACQSLYERM-----KGLG----KNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVAT 797
+L E+ K G + + ++ ILP+YSALP+++Q +IF KRK+++AT
Sbjct: 579 TFDTLQEKFLQVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIAT 638
Query: 798 NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC 857
NIAE SLTI GI YVID G++K VYNPK GLDSLVITPIS+A+A QR+GRAGRT PG
Sbjct: 639 NIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTA 698
Query: 858 YRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLS-FDFMDPPSPQALISAM 916
YRLYTE ++ +M +IPEIQR NL T L +K++ + D LS F F+D P Q +S++
Sbjct: 699 YRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLLKSLDVTDELSKFPFIDKPPLQTFLSSL 758
Query: 917 EQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF 976
+L+ +GA+D G LT LG +MA+FPL P LSK+LL +V GCSDE+LTI++M+ +F
Sbjct: 759 YELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVF 818
Query: 977 YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1036
YRP+E+Q +AD R KFF + DHLTLL V+E W+A NFS WC ++FVQ +SL RA+D+
Sbjct: 819 YRPKERQKEADIARNKFFIAKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDI 878
Query: 1037 RKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1096
R QLL+I+ K+ V+S+GK++ I+K I +GF AA+ Y L V +HP+
Sbjct: 879 RDQLLTILKSQKIPVISSGKDWDIIKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPT 938
Query: 1097 SAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQE 1154
SAL P +V+YHEL+MT+KEY+ VT +DP WL++ + + K K ++
Sbjct: 939 SALHGLGDLPPYVVYHELLMTSKEYICCVTSVDPFWLMEYGGLLYDI----KRIKNDQEA 994
Query: 1155 RIEPLYDRYHE 1165
L+ ++E
Sbjct: 995 TTTGLFGEHYE 1005
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 1625 (577.1 bits), Expect = 4.7e-167, P = 4.7e-167
Identities = 326/688 (47%), Positives = 474/688 (68%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + + + + LSI++QRQ LP++KL+ ++ + + Q +V+I
Sbjct: 17 GPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVII 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA++VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTNPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN----------CNIFTIPGRTFPVEILYTKQPESD 713
K+R DLRLIV SATLDAEKF +F + C I T+ GRTFPV+I Y + P D
Sbjct: 197 KKRGDLRLIVASATLDAEKFRDFFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQSPVPD 256
Query: 714 YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE--LIILPVY 771
Y+ +++ TV++IH TE +GDIL FLTGQEE++ L E+ + LG+ + L ILP+Y
Sbjct: 257 YIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMY 316
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 317 AGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIEC 376
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ +++ +++PE+QR NL L +K
Sbjct: 377 LVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DQLPQSTVPEMQRSNLAPVILQLK 435
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKM 950
A+GI+++L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +KM
Sbjct: 436 ALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKM 495
Query: 951 LLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW 1010
LL S + GCS EIL+I AM+Q N+F P +++QA + KF EGDHLT+L VYEA+
Sbjct: 496 LLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRAHRKFAVEEGDHLTMLNVYEAF 555
Query: 1011 KAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFF 1070
N + WC E+F+ + L RA VR+QL ++ K+++ S+ + + + I +GFF
Sbjct: 556 IKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGFF 615
Query: 1071 FHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMREVTVIDPK 1129
+AAR YRT+ ++ ++IHP+S L+ ++ P WVIY+E++ T+K YMR+VT I+
Sbjct: 616 ANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESA 675
Query: 1130 WLVDLAPRFFKVADPTKMSKRKRQERIE 1157
WL++LAP F++ T +S R ++ +++
Sbjct: 676 WLLELAPHFYQQG--THLSLRAKRAKVQ 701
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
Identities = 325/672 (48%), Positives = 466/672 (69%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + + + + LSI++QRQ LP++KL+ ++ + + Q +V++
Sbjct: 17 GPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA++VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
K+R DLRLIV SATLDAEKF FFN C I T+ GRTFPV+I Y + P
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE--LIILPV 770
DY+ +++ TV++IH TE +GDIL FLTGQEE++ L E+ + LG+ + L +LP+
Sbjct: 256 DYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGRAGR+ GKCYRLYTE A+ +++ +++PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAF-DQLPQSTVPEMQRSNLAPVILQL 434
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+++L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q NIF P +++QA + KF EGDHLT+L VYEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIRVHRKFAVEEGDHLTMLNVYEA 554
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N + WC E+F+ + L RA VR+QL ++ K+++ S+ + + + I +GF
Sbjct: 555 FIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGF 614
Query: 1070 FFHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMREVTVIDP 1128
F +AAR YRT+ ++ ++IHP+S L+ ++ P WVIY+E++ T+K YMR+VT I+
Sbjct: 615 FANAARFHSTGVYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674
Query: 1129 KWLVDLAPRFFK 1140
WL++LAP F++
Sbjct: 675 AWLLELAPHFYQ 686
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 1609 (571.5 bits), Expect = 2.3e-165, P = 2.3e-165
Identities = 324/665 (48%), Positives = 455/665 (68%)
Query: 503 GKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE 562
G + F + L+I++QRQ LP++K + ++ V Q +V++GETGSGK+TQ+ QYL E
Sbjct: 24 GSPIVFNPHTALTIEKQRQRLPVFKHRNNILYLVESFQTVVIVGETGSGKSTQIPQYLLE 83
Query: 563 AGYTTRGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TVIKYMT 620
AG+ GK IG TQPRRVAA SVA RVAEE G LG EVGY IRF+DC+ P T IK++T
Sbjct: 84 AGWAAEGKVIGVTQPRRVAATSVATRVAEERGAFLGHEVGYTIRFDDCSDPHATRIKFLT 143
Query: 621 DGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDA 680
DGML+RE++ D L +YSV++LDEAHERT++TD+ GLLK+++K+R DLRLIV SATLDA
Sbjct: 144 DGMLVREMMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKRRDLRLIVASATLDA 203
Query: 681 EKFSGYF-FN---------CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP 730
+KF +F N C I T+ GRTFPV+I YT P DY+ A++ TVL+IH TE
Sbjct: 204 KKFQDFFNLNESGDASKDTCGILTVEGRTFPVDIFYTVSPVPDYVKATVETVLKIHETED 263
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPELIILPVYSALPSEMQSRIFDPAPP 788
+GD+L FLTGQEE++ L E+ + L + L +LP+Y+ LP Q R+F+ P
Sbjct: 264 DGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAP 323
Query: 789 GKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGR 848
RKVVVATNIAE S+TI+G+ +VID F K YNP+ ++SL++TPIS+ASA QRAGR
Sbjct: 324 TVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGR 383
Query: 849 AGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPS 908
AGR GKC+RLYTE + ++ +++PE+QR NL L +KA+GI+++L F F+ PP
Sbjct: 384 AGRNRAGKCFRLYTEEDFE-KLPESTVPEMQRSNLAPVILQLKALGIDNVLRFSFLSPPP 442
Query: 909 PQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 967
Q+++ A+E L++LG LD+ G LT +G +MAEFPL P +KMLL S + GCS EI+TI
Sbjct: 443 AQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLESGNFGCSKEIVTIA 502
Query: 968 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1027
AM+Q NIF P ++ A ++ KF EGDHLT+L VYEA+ S WC ++F+
Sbjct: 503 AMMQIQNIFVAPHNQRKSAAREHRKFAVAEGDHLTMLNVYEAFIKHQKSSQWCQDHFLNY 562
Query: 1028 RSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVE 1087
+ L RA VR+QL +++K+K+ S+ + I + I +GFF +AAR YRTL +
Sbjct: 563 KGLLRATAVREQLRHLLNKFKVPRTSSEGDPDVILRCIVSGFFANAARMHHSGSYRTLRD 622
Query: 1088 NQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTK 1146
++ +YIHP S L+ ++ P WV+++E+V T+K YMR+VT ++ WLV+LAP F+K A
Sbjct: 623 DRELYIHPDSVLYGEKPPKWVVFNEVVQTSKYYMRDVTAVESSWLVELAPHFYKQAKHGS 682
Query: 1147 MSKRK 1151
+S ++
Sbjct: 683 LSSKR 687
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 1487 (528.5 bits), Expect = 5.7e-165, Sum P(2) = 5.7e-165
Identities = 289/589 (49%), Positives = 415/589 (70%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGCTQP 576
E R+SLP+Y ++E ++ +++NQ L+V+GETGSGKTTQ+ QYL EAGY+ + I CTQP
Sbjct: 224 EVRKSLPVYSYREEFLKIINENQTLIVVGETGSGKTTQLPQYLHEAGYSRNNQVIACTQP 283
Query: 577 RRVAAMSVAKRVAEEFGCRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLLREILIDDNLS 635
RRVAA SVA RVA E +LGE+VGY IRF+D C TVIKY+TDGMLLRE L D L
Sbjct: 284 RRVAATSVANRVANEMQVKLGEQVGYNIRFDDNCKDGVTVIKYVTDGMLLREFLQDPTLG 343
Query: 636 QYSVIMLDEAHERTIHTDVLFGLLKQLVK--RRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
+YS IM+DEAHERT+ T++L LLK ++ R+ DL++I+ SAT++AEKFS +F N I
Sbjct: 344 KYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDDLKIIIASATINAEKFSQFFNNAPIL 403
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEIDFACQSLY 752
IPGR FPV+I YTKQPE++Y+ A++ T+ QIH+T+P GDIL+FLTGQ+EI+ + L
Sbjct: 404 NIPGRRFPVKIHYTKQPEANYIQAAITTIFQIHMTQPLPGDILVFLTGQDEIETMEEILR 463
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
+ + LG + +I+ +Y+ LP E+Q +IF P P RK+V+ATNIAE S+TIDGI YV
Sbjct: 464 DSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGISYV 523
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
IDPG+ KQNVYNP G++SLV+ P S+ASA QRAGRAGR GPGKC+RL+T+ ++ NE+
Sbjct: 524 IDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNELDS 583
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
PEIQR+NL L + ++GINDLL F+FMDPPS +A+I A+ LY+LGAL+ +G LT
Sbjct: 584 NQQPEIQRVNLTSVILLLLSLGINDLLGFEFMDPPSKEAIIKALNLLYALGALNTQGKLT 643
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI-QTGNIFYRPREKQAQADQKRA 991
K G+KM+EFPLDP +K +L S + +I++IIAM+ ++ N+FYRP++K+ AD+++
Sbjct: 644 KTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELADKRKQ 703
Query: 992 KFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV 1051
+F +GD LL +++ W +S WC + F+Q ++++R +++ +QL+ + K ++V
Sbjct: 704 EFNDLQGDQFMLLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEV 763
Query: 1052 MSAGK----------NFTKIRKAITAGFFFHAARKDPQ-EGYRTLVENQ 1089
S + N T + K + +GFF + + P + Y+ L +
Sbjct: 764 NSRHQHRDHLQENTDNNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGK 812
Score = 140 (54.3 bits), Expect = 5.7e-165, Sum P(2) = 5.7e-165
Identities = 30/81 (37%), Positives = 49/81 (60%)
Query: 1057 NFTKIRKAITAGFFFHAARKDPQ-EGYRTLVE-----NQPVYIHPSSALFQRQPD--WVI 1108
N T + K + +GFF + + P + Y+ L N P YIHPSS +++ +P +++
Sbjct: 779 NNTLLTKCLISGFFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHPSSCIYKLKPKPKYLL 838
Query: 1109 YHELVMTTKEYMREVTVIDPK 1129
Y+ELV+T+KEYMR ++D K
Sbjct: 839 YYELVLTSKEYMRNCIILDEK 859
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 1600 (568.3 bits), Expect = 2.1e-164, P = 2.1e-164
Identities = 322/689 (46%), Positives = 472/689 (68%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + G + + + LSI++QRQ LP++KL+ ++ + + Q +V++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA++VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT T IK++TDGML+RE+++D L++YSVIMLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
K+R DLRLIV SATLDA+KF FFN C I T+ GRTFPV+I Y + P
Sbjct: 197 KKRGDLRLIVASATLDADKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE--LIILPV 770
DY+ +++ TV++IH TE +GD+L FLTGQEE++ L E+ + L + + L +LP+
Sbjct: 256 DYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ +++ +++PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQL 434
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+++L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q NIF P +++ A + KF EGDHLT+L +YEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEA 554
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N WC E+F+ + L RA VR+QL ++ K+++ S+ + + + I +GF
Sbjct: 555 FIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGF 614
Query: 1070 FFHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMREVTVIDP 1128
F +AAR YRT+ ++ ++IHP+S L+ ++ P WVIY+E++ T+K YMR+VT I+
Sbjct: 615 FANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYYMRDVTAIES 674
Query: 1129 KWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
WL++LAP F++ T +S + ++ +++
Sbjct: 675 AWLLELAPHFYQQG--THLSLKAKRAKVQ 701
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 1598 (567.6 bits), Expect = 3.4e-164, P = 3.4e-164
Identities = 294/529 (55%), Positives = 402/529 (75%)
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
SQ V+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SAT+D +FS +F + +F
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFR 90
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+ L +R
Sbjct: 91 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVID 814
+ LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI YV+D
Sbjct: 151 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 210
Query: 815 PGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS 874
PGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E+ T+
Sbjct: 211 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 270
Query: 875 IPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKL 934
+PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G LT
Sbjct: 271 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 330
Query: 935 GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQKRAKF 993
GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD R F
Sbjct: 331 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 390
Query: 994 FQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS 1053
F P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ ++ + S
Sbjct: 391 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 450
Query: 1054 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELV 1113
++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF++QP W++YHELV
Sbjct: 451 CQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELV 509
Query: 1114 MTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 510 LTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREE 558
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 1597 (567.2 bits), Expect = 4.3e-164, P = 4.3e-164
Identities = 294/529 (55%), Positives = 401/529 (75%)
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
SQ V+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SAT+D +FS +F +F
Sbjct: 31 SQLGVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDGAPVFR 90
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+ L +R
Sbjct: 91 IPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDR 150
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVID 814
+ LG + EL++LP+Y+ LPS+MQ+RIF P PPG RKVVVATNIAE SLTI+GI YV+D
Sbjct: 151 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 210
Query: 815 PGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS 874
PGF KQ YNP+ G++SL +TP S+ASA QRAGRAGR GKC+RLYT AY++E+ T+
Sbjct: 211 PGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETT 270
Query: 875 IPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKL 934
+PEIQR +LG L +K++GI+DL+ FDF+DPP + L+ A+EQLY+LGAL+ G LT
Sbjct: 271 VPEIQRTSLGNVVLLLKSLGIHDLMHFDFLDPPPYETLLLALEQLYALGALNHLGELTTS 330
Query: 935 GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN-IFYRPREKQAQADQKRAKF 993
GRKMAE P+DP LSKM+LAS CS+EILT+ AM+ N IFYRP++K AD R F
Sbjct: 331 GRKMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNF 390
Query: 994 FQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS 1053
F P GDHL LL VY W +S WC+ENFVQ RS+RRA+DVR+QL ++++ ++ + S
Sbjct: 391 FLPGGDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSS 450
Query: 1054 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELV 1113
++ ++RKAITAG+F+H AR + GYRT+ + Q V+IHP+S+LF++QP W++YHELV
Sbjct: 451 CQGDYIRVRKAITAGYFYHTARLT-RSGYRTVKQQQTVFIHPNSSLFEQQPRWLLYHELV 509
Query: 1114 MTTKEYMREVTVIDPKWLVDLAPRFFK---VADP--TKMSKRKRQERIE 1157
+TTKE+MR+V I+ WL+++AP ++K + DP KM K+ + R E
Sbjct: 510 LTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTREE 558
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 1592 (565.5 bits), Expect = 1.5e-163, P = 1.5e-163
Identities = 327/690 (47%), Positives = 463/690 (67%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + ++ G + + + LSI++QRQ LP++KL+ ++ V Q LV++
Sbjct: 17 GPGVSVSEERQSPAESSGVTVVYNPYASLSIEQQRQKLPVFKLRNHILYLVESYQTLVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA+SVA RVA+E G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCI 136
Query: 605 RFEDCTGPD-TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE++ D L++YSV+MLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFNCN-----------IFTIPGRTFPVEILYTKQPES 712
K+R DLRLIV SATLDAEKF FFN N I T+ GRTFPV+I Y + P
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNV--PELIILPV 770
DY+ +++ T ++IH E +GDIL FLTGQEE++ L E+ + L + L +LP+
Sbjct: 256 DYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNPK ++
Sbjct: 316 YAGLPSPDQMKVFERVSRSVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS-IPEIQRINLGFTTLT 889
LV+ P+S+ASA QRAGRAGR GKCYRLYT + E P S +PE+QR NL L
Sbjct: 376 CLVVVPVSKASANQRAGRAGRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQ 435
Query: 890 MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLS 948
+KA+GI+++L F F+ PP Q+++ A+E LY+LG LD LT+ LG ++AEFPL+P +
Sbjct: 436 LKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFA 495
Query: 949 KMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYE 1008
KMLL S + GCS EILTI AM+Q NIF P +++QA ++ KF EGDHLT+L VYE
Sbjct: 496 KMLLESGNFGCSQEILTIAAMMQIQNIFLIPPNQKSQAARQHRKFAVEEGDHLTMLNVYE 555
Query: 1009 AWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAG 1068
A+ + S WC E+F+ + L RA VR+QL ++ +K+ S+ + + + I +G
Sbjct: 556 AFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSEGDPDPVLRCIVSG 615
Query: 1069 FFFHAARKDPQEGYRTLVENQPVYIHPSSALF-QRQPDWVIYHELVMTTKEYMREVTVID 1127
FF +AA+ YRT+ ++ ++IHP+S L+ ++ P WV+Y+E++ T K YMR+VT I+
Sbjct: 616 FFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAIE 675
Query: 1128 PKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
WLV+LAP F++ T +S ++ +++
Sbjct: 676 SAWLVELAPHFYQQG--THLSLNAKRAKVD 703
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 1580 (561.2 bits), Expect = 2.7e-162, P = 2.7e-162
Identities = 307/657 (46%), Positives = 458/657 (69%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 575
I+ Q++SLP++ K L++ ++ +++I ETG+GKTTQ+ QYL E GY G I TQ
Sbjct: 66 IKLQKESLPVFTAKDALLKNFKEHSTVIIISETGTGKTTQIPQYLYENGYKDNGIIAITQ 125
Query: 576 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLS 635
PRRVAA+S++KRV++E G LG++VGY +RF+D T T +KYMTDGML+RE ++D +LS
Sbjct: 126 PRRVAAVSISKRVSQEMGVELGDQVGYCVRFDDKTNEKTKLKYMTDGMLVREAMLDSSLS 185
Query: 636 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD---LRLIVTSATLDAEKFSGYFFNCNI 692
+YSVI+LDEAHERT++TDVLFGLLK + KRR L++I+ SATLDAE FS YF N +
Sbjct: 186 KYSVIILDEAHERTLNTDVLFGLLKSIQKRREKKNPLKIIIMSATLDAELFSQYFNNAPV 245
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLT----------EPE--GDILLFLTG 740
I GR FPV+I YT++ + DY+DA+LITVLQIH+ E E GDIL+FLTG
Sbjct: 246 LYIEGRQFPVQIYYTEEIQKDYVDAALITVLQIHIAHLTDKSINKEEEEDGGDILVFLTG 305
Query: 741 QEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIA 800
++EI+ + L +R+ L +LI+ P++SALP E Q ++F+ AP G RKV++ATNIA
Sbjct: 306 RDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSRKVILATNIA 365
Query: 801 EASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRL 860
E SLTI+GI YV+D G K ++NPK G+DSL I PIS+ASAKQR GRAGR GKCYRL
Sbjct: 366 ETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGREFEGKCYRL 425
Query: 861 YTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLY 920
YT+ + ++ +SIPEI+R N+ L +K +GIND+LSFDF++ P ++I ++E L+
Sbjct: 426 YTQETFE-KLDTSSIPEIKRSNIANVILQLKTIGINDILSFDFLESPPVASVIKSLELLF 484
Query: 921 SLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPR 980
L A+ + G LT+LG+KMA FPLDP SK L+ S++ CS+E+L II+++ +IF+ P+
Sbjct: 485 CLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFECSEEVLIIISILSVESIFFTPK 544
Query: 981 EKQAQADQKRAKFFQPEGDHLTLLAVY-EAWKAK-NFSGPWCFENFVQSRSLRRAQDVRK 1038
EK+ + + + FF P+GDH+T L V+ E K+K WCF++F+ +S+ + +V +
Sbjct: 545 EKKKEVEDVKKIFFSPDGDHITFLNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFE 604
Query: 1039 QLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA 1098
QL+ KL ++S G +F +I+K+ GFF + A P + Y+T+V+N+ + IHP+S
Sbjct: 605 QLVKYCISLKLPIVSCGSDFDRIKKSFIGGFFLNTAILQPDKKYKTMVDNKEIQIHPTSF 664
Query: 1099 LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQER 1155
LF ++P ++Y+EL +TTK + R + I+ WL ++ P+++ T+++K+++Q++
Sbjct: 665 LFDQKPQHILYNELTITTKAFARNIIPIEGSWLAEICPKYYG----TRLTKQQQQQQ 717
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 995 (355.3 bits), Expect = 1.4e-161, Sum P(4) = 1.4e-161
Identities = 188/310 (60%), Positives = 247/310 (79%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 528 KKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 587
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G RLGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 588 CTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREA 647
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+L+VTSAT+DA+KF+ +F N I
Sbjct: 648 DLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPI 707
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ + +
Sbjct: 708 FHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIV 767
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L K P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 768 EHLEELEK-APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 826
Query: 813 IDPGFAKQNV 822
ID G+ K V
Sbjct: 827 IDSGYCKLKV 836
Score = 541 (195.5 bits), Expect = 1.4e-161, Sum P(4) = 1.4e-161
Identities = 109/259 (42%), Positives = 163/259 (62%)
Query: 898 LLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDL 957
L+ F + P+ L SA+ +S G + GL T GR+M EFPLDP LSKML+ S D+
Sbjct: 851 LIEF-YGSEPAFHWLQSALLLPFSGGFIPPGGL-TSTGRQMVEFPLDPALSKMLIVSCDM 908
Query: 958 GCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSG 1017
GCS EIL I++M+ IFYRP+ ++ ++DQ R KF PE DHLT L VY WK N+S
Sbjct: 909 GCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLTYLNVYLQWKNNNYST 968
Query: 1018 PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKD 1077
WC ++F+ ++++R+ ++VR QL IM + ++ + S G ++ +RK I A +F AA+
Sbjct: 969 LWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVRKCICAAYFHQAAKLK 1028
Query: 1078 PQEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLA 1135
Y + P ++HP+S+LF PD+++YHELVMTTKEYM+ VT +D +WL +L
Sbjct: 1029 GIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELG 1088
Query: 1136 PRFFKV--ADPTKMSKRKR 1152
P F+ + A ++ R+R
Sbjct: 1089 PMFYSIKHAGKSRQENRRR 1107
Score = 43 (20.2 bits), Expect = 1.4e-161, Sum P(4) = 1.4e-161
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 203 DRENDDSGDRSGR 215
D E D+ DRSGR
Sbjct: 93 DEEEDEEEDRSGR 105
Score = 43 (20.2 bits), Expect = 1.4e-161, Sum P(4) = 1.4e-161
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 381 ERWETNRMLTSGVV 394
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 918 (328.2 bits), Expect = 2.2e-161, Sum P(2) = 2.2e-161
Identities = 176/375 (46%), Positives = 253/375 (67%)
Query: 767 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 826
I P+YS L SE QS+IF RK++V+TNIAE SLT+DGI YVID G+ K VYN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 827 QGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFT 886
G+D L +TPISQA+A QR+GRAGRTG G CYRLYTE+ + ++ +IPEIQR NL
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 887 TLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
L +K++ + +L FDF+D PS +++I+++ +L+ LGA++ EG LT +GRKM +FPLDPP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV 1006
LSK+++ S + C+ EIL I++M+ + +IF +E + K+ KF PE DHLTLL +
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAIT 1066
Y W++ N+S WC +NF+Q ++L +A++V QL+ I+ + +S + IRK I
Sbjct: 1012 YLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTIC 1071
Query: 1067 AGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ--RQPDWVIYHELVMTTKEYMREVT 1124
+G+F +AA+ Y L N ++HP+S+L+ PD+VIY E+V TTKEYMR VT
Sbjct: 1072 SGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVT 1131
Query: 1125 VIDPKWLVDLAPRFF 1139
+DP+WL +L P FF
Sbjct: 1132 TVDPEWLCELGPLFF 1146
Score = 675 (242.7 bits), Expect = 2.2e-161, Sum P(2) = 2.2e-161
Identities = 134/249 (53%), Positives = 181/249 (72%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
+ K + + ++SLPIYK K EL+ AV++N +++++GETGSGKTTQ+ QYL E GY G
Sbjct: 467 KDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGI 526
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRRVAA+SVA RV+ E +G VGY IRFED T DT I+Y+TDG+LLRE L
Sbjct: 527 ICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLN 586
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L +YSVI++DEAHER+I+TDVL G+LK + +R DL+LIVTSAT+DA+KFS +F N
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 691 NIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-----GDILLFLTGQEEID 745
I+ I GRTF V I Y + P +DY++ ++ +QIH+++ GDIL+F+TGQE+I+
Sbjct: 647 PIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDIN 706
Query: 746 FACQSLYER 754
C L ER
Sbjct: 707 ATCYLLSER 715
Score = 48 (22.0 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1134 LAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNS 1168
L+ RF++V + K SK +++ I + + +E N+
Sbjct: 712 LSERFYEVYESYKESKNNKKDTINKIKNILNEDNN 746
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 918 (328.2 bits), Expect = 2.2e-161, Sum P(2) = 2.2e-161
Identities = 176/375 (46%), Positives = 253/375 (67%)
Query: 767 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 826
I P+YS L SE QS+IF RK++V+TNIAE SLT+DGI YVID G+ K VYN
Sbjct: 774 IFPIYSQLSSEQQSKIFKKYD--LRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQT 831
Query: 827 QGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFT 886
G+D L +TPISQA+A QR+GRAGRTG G CYRLYTE+ + ++ +IPEIQR NL
Sbjct: 832 IGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNV 891
Query: 887 TLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
L +K++ + +L FDF+D PS +++I+++ +L+ LGA++ EG LT +GRKM +FPLDPP
Sbjct: 892 VLLLKSLHVQNLFEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLDPP 951
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV 1006
LSK+++ S + C+ EIL I++M+ + +IF +E + K+ KF PE DHLTLL +
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKKEKFTVPESDHLTLLNI 1011
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAIT 1066
Y W++ N+S WC +NF+Q ++L +A++V QL+ I+ + +S + IRK I
Sbjct: 1012 YLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCDNKWELIRKTIC 1071
Query: 1067 AGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ--RQPDWVIYHELVMTTKEYMREVT 1124
+G+F +AA+ Y L N ++HP+S+L+ PD+VIY E+V TTKEYMR VT
Sbjct: 1072 SGYFHNAAKLKSFSEYINLRTNVSCHVHPNSSLYNIGYTPDYVIYQEIVFTTKEYMRNVT 1131
Query: 1125 VIDPKWLVDLAPRFF 1139
+DP+WL +L P FF
Sbjct: 1132 TVDPEWLCELGPLFF 1146
Score = 675 (242.7 bits), Expect = 2.2e-161, Sum P(2) = 2.2e-161
Identities = 134/249 (53%), Positives = 181/249 (72%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
+ K + + ++SLPIYK K EL+ AV++N +++++GETGSGKTTQ+ QYL E GY G
Sbjct: 467 KDKEELLKLKESLPIYKSKHELLDAVYNNNIIIIVGETGSGKTTQIVQYLYEEGYHRNGI 526
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRRVAA+SVA RV+ E +G VGY IRFED T DT I+Y+TDG+LLRE L
Sbjct: 527 ICCTQPRRVAAVSVAYRVSYEMNVDIGSLVGYTIRFEDNTTKDTKIRYVTDGILLRETLN 586
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L +YSVI++DEAHER+I+TDVL G+LK + +R DL+LIVTSAT+DA+KFS +F N
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRNDLKLIVTSATIDAKKFSAFFGNA 646
Query: 691 NIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE-----GDILLFLTGQEEID 745
I+ I GRTF V I Y + P +DY++ ++ +QIH+++ GDIL+F+TGQE+I+
Sbjct: 647 PIYNIQGRTFKVHIEYLRTPCNDYIECAVQKAIQIHVSDNNYDNNFGDILIFMTGQEDIN 706
Query: 746 FACQSLYER 754
C L ER
Sbjct: 707 ATCYLLSER 715
Score = 48 (22.0 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 10/35 (28%), Positives = 21/35 (60%)
Query: 1134 LAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNS 1168
L+ RF++V + K SK +++ I + + +E N+
Sbjct: 712 LSERFYEVYESYKESKNNKKDTINKIKNILNEDNN 746
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 995 (355.3 bits), Expect = 9.9e-161, Sum P(4) = 9.9e-161
Identities = 188/310 (60%), Positives = 247/310 (79%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
K SI EQRQ LPI+ +++EL+ + DN +++V+GETGSGKTTQ+TQYL E GYT G IG
Sbjct: 525 KKSILEQRQYLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIG 584
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRRVAAMSVAKRV+EE G RLGEEVGYAIRFEDCT +T+IKYMTDG+LLRE L +
Sbjct: 585 CTQPRRVAAMSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTIIKYMTDGILLRESLREA 644
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+L YS I++DEAHER+++TDVLFGLL+++V RR DL+L+VTSAT+DA+KF+ +F N I
Sbjct: 645 DLDNYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPI 704
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
F IPGRTFPV+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ + +
Sbjct: 705 FHIPGRTFPVDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIV 764
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E ++ L K P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +V
Sbjct: 765 EHLEELEK-APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFV 823
Query: 813 IDPGFAKQNV 822
ID G+ K V
Sbjct: 824 IDSGYCKLKV 833
Score = 533 (192.7 bits), Expect = 9.9e-161, Sum P(4) = 9.9e-161
Identities = 100/226 (44%), Positives = 148/226 (65%)
Query: 931 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKR 990
LT GR+M EFPLDP LSKML+ S D+GCS EIL I++M+ IFYRP+ ++ ++DQ R
Sbjct: 876 LTSTGRQMVEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVR 935
Query: 991 AKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLD 1050
KF PE DHLT L VY WK N+S WC ++F+ ++++R+ ++VR QL IM + ++
Sbjct: 936 EKFAVPESDHLTYLNVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMS 995
Query: 1051 VMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR--QPDWVI 1108
+ S G ++ +RK I A +F AA+ Y + P ++HP+S+LF PD+++
Sbjct: 996 LASCGTDWDVVRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIV 1055
Query: 1109 YHELVMTTKEYMREVTVIDPKWLVDLAPRFFKV--ADPTKMSKRKR 1152
YHELVMTTKEYM+ VT +D +WL +L P F+ + A ++ R+R
Sbjct: 1056 YHELVMTTKEYMQCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRR 1101
Score = 43 (20.2 bits), Expect = 9.9e-161, Sum P(4) = 9.9e-161
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 203 DRENDDSGDRSGR 215
D E D+ DRSGR
Sbjct: 90 DEEEDEEEDRSGR 102
Score = 43 (20.2 bits), Expect = 9.9e-161, Sum P(4) = 9.9e-161
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 357 EKWEAKQLIASGVL 370
E+WE +++ SGV+
Sbjct: 378 ERWETNRMLTSGVV 391
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 1467 (521.5 bits), Expect = 4.2e-160, Sum P(2) = 4.2e-160
Identities = 301/616 (48%), Positives = 418/616 (67%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + G + + + LSI++QRQ LP++KL+ ++ V + Q +V++
Sbjct: 17 GPGVSISEERQSVTENSGTTVIYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQV QYLAEAG+T G++ G TQPRRVAA++VA RVA+E G LG EVGY I
Sbjct: 77 GETGCGKSTQVPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVADERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE+++D L++YSV+MLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
K+R DLRLIV SATLDAEKF FFN C I T+ GRTFPV+I Y + P
Sbjct: 197 KKRGDLRLIVASATLDAEKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPELIILPV 770
DY+ A++ TV++IH TE +GDIL FLTGQEE++ L E+ + L + L +LP+
Sbjct: 256 DYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGR GR GKCYRLYTE A+ ++ +++PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFE-QLPQSTVPEMQRSNLAPVVLQL 434
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+ +L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDSVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q N+F P +++QA + KF EGDHLT+L VYEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATRVHRKFAVEEGDHLTMLNVYEA 554
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N S WC E+F+ + L RA VR QL ++ K+++ MS+ + + + I +GF
Sbjct: 555 FIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPVLRCIVSGF 614
Query: 1070 FFHAARKDPQEGYRTL 1085
F +AAR YR +
Sbjct: 615 FANAARFHSTGAYRVI 630
Score = 114 (45.2 bits), Expect = 4.2e-160, Sum P(2) = 4.2e-160
Identities = 20/51 (39%), Positives = 37/51 (72%)
Query: 1107 VIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
VIY+E++ T+K YMR+VT I+ WL++LAP F++ T +S + ++ +++
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG--THLSLKAKRAKVQ 677
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 1558 (553.5 bits), Expect = 5.9e-160, P = 5.9e-160
Identities = 321/689 (46%), Positives = 467/689 (67%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + + + + LSI++QRQ LP++KL+ ++ V + Q +V++
Sbjct: 17 GPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA++VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
++R DLRL+V SATLDAEKF FFN C I T+ GRTFPV+I Y + P
Sbjct: 197 RKRGDLRLLVASATLDAEKFRD-FFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE--LIILPV 770
DY+ +++ TV++IH TE +GDIL FLTGQEE++ L E+ + LG+ + L +LP+
Sbjct: 256 DYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGRAGR+ GKCYRLYTE A+ +++ ++PE+QR NL L +
Sbjct: 376 CLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF-DKLPQCTVPEMQRSNLAPVILQL 434
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+++L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAK 494
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q NIF P +++QA + KF EGDHLT+L VYEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEA 554
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N + WC E+F+ + L RA VR+QL ++ K+++ S+ + + + I +GF
Sbjct: 555 FIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGF 614
Query: 1070 FFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ-PDWVIYHELVMTTKEYMREVTVIDP 1128
F +AAR Y ++ +Y++ + LF R+ VIY+E++ T+K YMR+VT I+
Sbjct: 615 FANAARFHSTGAYSVILSPHSLYLYYLT-LFNRKFLQKVIYNEVIQTSKYYMRDVTAIES 673
Query: 1129 KWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
WL++LAP F++ T +S + ++ +++
Sbjct: 674 AWLLELAPHFYQQG--THLSLKAKRAKVQ 700
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 1547 (549.6 bits), Expect = 8.6e-159, P = 8.6e-159
Identities = 323/694 (46%), Positives = 467/694 (67%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + + + + LSI++QRQ LP++KL+ ++ V + Q +V++
Sbjct: 9 GPGVSISEERQSLAENSATTVVYNPYAALSIEQQRQKLPVFKLRNHILYLVENYQTVVIV 68
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA++VA RVAEE G LG EVGY I
Sbjct: 69 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 128
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT P T IK++TDGML+RE+++D L++YS IMLDEAHERT++TD+ GLLK++
Sbjct: 129 RFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQ 188
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
++R DLRL+V SATLDAEKF FFN C I T+ GRTFPV+I Y + P
Sbjct: 189 RKRGDLRLLVASATLDAEKFRD-FFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQSPVP 247
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE--LIILPV 770
DY+ +++ TV++IH TE +GDIL FLTGQEE++ L E+ + LG+ + L +LP+
Sbjct: 248 DYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPM 307
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 308 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIE 367
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGRAGR+ GKCYRLYTE A+ +++ ++PE+QR NL L +
Sbjct: 368 CLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAF-DKLPQCTVPEMQRSNLAPVILQL 426
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+++L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 427 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAK 486
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q NIF P +++QA + KF EGDHLT+L VYEA
Sbjct: 487 MLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIRVHRKFAVEEGDHLTMLNVYEA 546
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N + WC E+F+ + L RA VR+QL ++ K+++ S+ + + + I +GF
Sbjct: 547 FIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPVLRCIVSGF 606
Query: 1070 FFHAARKDPQEGY-RTLVEN-QPVYIHPSSALFQRQPD-W---VIYHELVMTTKEYMREV 1123
F +AAR Y RTL + + +H + + Q W VIY+E++ T+K YMR+V
Sbjct: 607 FANAARFHSTGAYSRTLAHSGREAQVHLFTVVPGTQSRYWGFRVIYNEVIQTSKYYMRDV 666
Query: 1124 TVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
T I+ WL++LAP F++ T +S + ++ +++
Sbjct: 667 TAIESAWLLELAPHFYQQG--THLSLKAKRAKVQ 698
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 1438 (511.3 bits), Expect = 4.8e-157, Sum P(2) = 4.8e-157
Identities = 294/616 (47%), Positives = 419/616 (68%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + G + + + LSI++QRQ LP++KL+ ++ + + Q +V++
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKLRNHILYLIENYQTVVIV 76
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAI 604
GETG GK+TQ+ QYLAEAG+T G++ G TQPRRVAA++VA RVAEE G LG EVGY I
Sbjct: 77 GETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCI 136
Query: 605 RFEDCTGP-DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV 663
RF+DCT T IK++TDGML+RE+++D L++YSVIMLDEAHERT++TD+ GLLK++
Sbjct: 137 RFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQ 196
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFN-----------CNIFTIPGRTFPVEILYTKQPES 712
K+R DLRLIV SATLDA+KF FFN C I T+ GRTFPV+I Y + P
Sbjct: 197 KKRGDLRLIVASATLDADKFRD-FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQSPVP 255
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE--LIILPV 770
DY+ +++ TV++IH TE +GD+L FLTGQEE++ L E+ + L + + L +LP+
Sbjct: 256 DYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPM 315
Query: 771 YSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLD 830
Y+ LPS Q ++F+ RKV+VATN+AE S+TI GI YVID GF K YNP+ ++
Sbjct: 316 YAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375
Query: 831 SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTM 890
LV+ P+SQASA QRAGR GR+ GKCYRLYTE A+ +++ +++PE+QR NL L +
Sbjct: 376 CLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF-DKLPQSTVPEMQRSNLAPVILQL 434
Query: 891 KAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSK 949
KA+GI+++L F FM PP Q+++ A+E LY+LG LD++ LT+ LG ++AEFPL+P +K
Sbjct: 435 KALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAK 494
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA 1009
MLL S + GCS EIL+I AM+Q NIF P +++ A + KF EGDHLT+L +YEA
Sbjct: 495 MLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEA 554
Query: 1010 WKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGF 1069
+ N WC E+F+ + L RA VR+QL ++ K+++ S+ + + + I +GF
Sbjct: 555 FIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGF 614
Query: 1070 FFHAARKDPQEGYRTL 1085
F +AAR YR +
Sbjct: 615 FANAARFHSTGAYRVI 630
Score = 114 (45.2 bits), Expect = 4.8e-157, Sum P(2) = 4.8e-157
Identities = 20/51 (39%), Positives = 37/51 (72%)
Query: 1107 VIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIE 1157
VIY+E++ T+K YMR+VT I+ WL++LAP F++ T +S + ++ +++
Sbjct: 629 VIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG--THLSLKAKRAKVQ 677
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 1084 (386.6 bits), Expect = 4.8e-157, Sum P(2) = 4.8e-157
Identities = 220/503 (43%), Positives = 328/503 (65%)
Query: 657 GLLKQLVKRR-PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYL 715
G+LK R+ L+LI+ SA+LDA FS YF + GR FPV+ILYT PESDY+
Sbjct: 216 GVLKGYQGRKLSPLKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPVDILYTVHPESDYV 275
Query: 716 DASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALP 775
DA+L+T+ QIH E GDIL+FLTGQ+EI+ + + ER++ + ++ +L+ L ++SALP
Sbjct: 276 DATLVTIFQIHFEEKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLAIFSALP 335
Query: 776 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 835
SE Q ++F PAP G RKV++ATNIAE S+TI GI YVIDPGF K Y+P +G++SL +
Sbjct: 336 SEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGMESLDVV 395
Query: 836 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGI 895
P S+A QR+GRAGR GPGK +RLY E + ++ ++ PEI+R NL L +KA+GI
Sbjct: 396 PASKAQTLQRSGRAGREGPGKSFRLYPEREFE-KLEDSTKPEIKRCNLSNIILQLKALGI 454
Query: 896 NDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLAS 954
+D++ FDF+D PS A+I A+ +L+SLGAL ++G L +G +M+ PL+P SK L+ +
Sbjct: 455 DDIVGFDFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPVYSKALILA 514
Query: 955 VDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY----EAW 1010
C +E+L +A++ +IFY PREK+ +A + F EGDHLT L+VY E
Sbjct: 515 NQFNCLEEMLITVAVLSVESIFYDPREKREEARTSKNHFASVEGDHLTYLSVYRESDEFL 574
Query: 1011 KAKNFSGP----------WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTK 1060
+ + +G WC EN+V SRSL+ A+D+ +Q+ +++ +V S G +
Sbjct: 575 EKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDMLA 634
Query: 1061 IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYM 1120
R+ + A FF AA++ YR L + V+IHP+S LF+ +P+ VI++EL+ T+K+Y+
Sbjct: 635 FRRCLAASFFLKAAQRQLDGTYRALESGEVVHIHPTSVLFRAKPECVIFNELMQTSKKYI 694
Query: 1121 REVTVIDPKWLVDLAPRFFKVAD 1143
+ +T+ID WL +LAP F+ A+
Sbjct: 695 KNLTIIDSLWLSELAPHHFQTAE 717
Score = 468 (169.8 bits), Expect = 4.8e-157, Sum P(2) = 4.8e-157
Identities = 90/160 (56%), Positives = 125/160 (78%)
Query: 508 FGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 567
F R K++ E R+SLPI ++K L++ V N +L+++GETGSGKTTQ+ Q+L AG+
Sbjct: 28 FSMRQKIA--EHRRSLPIASVEKRLVEEVQKNDILIIVGETGSGKTTQLPQFLYNAGFCR 85
Query: 568 RGK-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
GK IG TQPRR+AA++VAKRVAEE +LG++VGY+IRF+D T T +KYMTDG+LLR
Sbjct: 86 EGKMIGITQPRRIAAVTVAKRVAEECEVQLGQKVGYSIRFDDTTSGSTRLKYMTDGLLLR 145
Query: 627 EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR 666
E L+D +LS+YSVI++DEAH+R++HTDVL LLK++ + R
Sbjct: 146 EALLDPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTR 185
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 1468 (521.8 bits), Expect = 1.9e-155, Sum P(2) = 1.9e-155
Identities = 307/661 (46%), Positives = 445/661 (67%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-G 572
+SI E+RQSL + V++ + I + + V +YLAEAG+T G++ G
Sbjct: 20 VSISEERQSLA----ENSGTTVVYNPYAALSIEQ--QRQKLPVFKYLAEAGWTAEGRVVG 73
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP-DTVIKYMTDGMLLREILID 631
TQPRRVAA++VA RVAEE G LG EVGY IRF+DCT T IK++TDGML+RE+++D
Sbjct: 74 VTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVD 133
Query: 632 DNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN-- 689
L++YSVIMLDEAHERT++TD+ GLLK++ K+R DLRLIV SATLDA+KF FFN
Sbjct: 134 PLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRD-FFNQN 192
Query: 690 ---------CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTG 740
C I T+ GRTFPV+I Y + P DY+ +++ TV++IH TE +GD+L FLTG
Sbjct: 193 ETSDPARDTCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTG 252
Query: 741 QEEIDFACQSLYERMKGLGKNVPE--LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 798
QEE++ L E+ + L + + L +LP+Y+ LPS Q ++F+ RKV+VATN
Sbjct: 253 QEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATN 312
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
+AE S+TI GI YVID GF K YNP+ ++ LV+ P+SQASA QRAGR GR+ GKCY
Sbjct: 313 VAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCY 372
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYTE A+ +++ +++PE+QR NL L +KA+GI+++L F FM PP Q+++ A+E
Sbjct: 373 RLYTEEAF-DKLPQSTVPEMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALEL 431
Query: 919 LYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY 977
LY+LG LD++ LT+ LG ++AEFPL+P +KMLL S + GCS EIL+I AM+Q NIF
Sbjct: 432 LYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFV 491
Query: 978 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR 1037
P +++ A + KF EGDHLT+L +YEA+ N WC E+F+ + L RA VR
Sbjct: 492 VPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVR 551
Query: 1038 KQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS 1097
+QL ++ K+++ S+ + + + I +GFF +AAR YRT+ ++ ++IHP+S
Sbjct: 552 EQLKKLLVKFQVPRKSSEGDPDLVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPAS 611
Query: 1098 ALF-QRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERI 1156
L+ ++ P WVIY+E++ T+K YMR+VT I+ WL++LAP F++ T +S + ++ ++
Sbjct: 612 VLYAEKPPRWVIYNEVIQTSKYYMRDVTAIESAWLLELAPHFYQQG--THLSLKAKRAKV 669
Query: 1157 E 1157
+
Sbjct: 670 Q 670
Score = 69 (29.3 bits), Expect = 1.9e-155, Sum P(2) = 1.9e-155
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 486 GVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
G G+S + + + G + + + LSI++QRQ LP++K L +A
Sbjct: 17 GPGVSISEERQSLAENSGTTVVYNPYAALSIEQQRQKLPVFKY---LAEA---------- 63
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKI 571
G T G+ VTQ A T G++
Sbjct: 64 GWTAEGRVVGVTQPRRVAAVTVAGRV 89
>UNIPROTKB|H9KZI9 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00575 PROSITE:PS00690
PROSITE:PS50126 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 EMBL:AADN02006936
Ensembl:ENSGALT00000013764 OMA:CRERERG Uniprot:H9KZI9
Length = 692
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 301/551 (54%), Positives = 385/551 (69%)
Query: 195 RRYDNKYGDRENDDSGDRS-GRYRGNEPELYQVYKGRVSRVVDTGCFVQLNDFRGK-EGL 252
RR +KY +R N+ D+ R EP + +Y G+V+ ++ GCFVQL R + EGL
Sbjct: 145 RRDRDKYLERSNERWRDKHVDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGL 204
Query: 253 VHVSQIATR-RIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISE 311
VH+S++ R+ N DVV + Q V VKV+S +G K SLSM+DVDQ+TG+DL P ++ +
Sbjct: 205 VHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNL 264
Query: 312 DDALGNNPSGTRDGPTTRMGLSGIRIVEEDGVVPSRRPLKRMSSPEKWEAKQLIASGVLS 371
S + + L VE+D + R+ L R+S PEKWE KQ+IA+ VLS
Sbjct: 265 VGETNEETSMRNPDRPSHLSLVNAPEVEDDTL--ERKRLTRISDPEKWEIKQMIAANVLS 322
Query: 372 VEDYPMYDEEGDGXXXXXXXXXXXXXXXXXXXXXXFLQGQTRYSVDMSPVKIFKNPEGXX 431
E++P +DEE FL+G T+ S+DMSP+KI KNP+G
Sbjct: 323 KEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSL 382
Query: 432 XXXXXXXXXXIKXXXXXXXXXXXTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 491
K +DSIP LN W DP+P+ R +A +RG+G+
Sbjct: 383 SQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRGIGMMP 442
Query: 492 YDMPEWKKDAFG--KALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 549
D+PEWKK AFG KA ++G++++LSI EQR+SLPI++LK++LIQAVHDNQ+L+VIGETG
Sbjct: 443 NDIPEWKKHAFGGNKA-SYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVIGETG 501
Query: 550 SGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 609
SGKTTQ+TQYLAEAGYT+RGKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDC
Sbjct: 502 SGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDC 561
Query: 610 TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL 669
T P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTIHTDVLFGLLK+ V++R D+
Sbjct: 562 TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDM 621
Query: 670 RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE 729
+LIVTSATLDA KFS YF+ IFTIPGRT+PVEILYTK+PE+DYLDASLITV+QIHLTE
Sbjct: 622 KLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTE 681
Query: 730 PEGDILLFLTG 740
P G+ ++ + G
Sbjct: 682 PPGEWIVMIHG 692
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 1480 (526.0 bits), Expect = 1.1e-151, P = 1.1e-151
Identities = 298/628 (47%), Positives = 433/628 (68%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 575
I EQR++LPI++ L Q + DN+V+VV+GETGSGK+TQ+ Q+L E Y G + TQ
Sbjct: 89 ILEQRKNLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQ 148
Query: 576 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLS 635
PRRVAA+++AKRVA E GCRLGE+VGY+IRF+D T T IKY+TDGMLLRE++ D LS
Sbjct: 149 PRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILS 208
Query: 636 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTI 695
QY ++LDEAHERT+ TD+L G +K+++K+RP LR+I+ SATL+AE+FS +F I I
Sbjct: 209 QYHTLILDEAHERTLMTDMLLGFVKKIIKKRPALRVIIMSATLNAERFSEFFDGAEICYI 268
Query: 696 PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 755
GR +PV+I YT PE DYLDA L T+ Q+H P GDIL+FLTGQ+EI+ A ++L +
Sbjct: 269 SGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIE-ALEALIKSY 327
Query: 756 -KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVID 814
K L N+P++ P++++LP E Q ++F PA RKVV++TNIAE S+TI GI YVID
Sbjct: 328 SKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVID 387
Query: 815 PGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTS 874
G AK +N K GL+SL + PISQ++A QR+GRAGR G+CYR+YTE+ + +++ +
Sbjct: 388 TGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKET 446
Query: 875 IPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKL 934
IPEI+RI+L LT+KA G ND+++F +MDPPS + L+ A+E LYS+GALD+ G + L
Sbjct: 447 IPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDL 506
Query: 935 GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFF 994
G +M+ PL P L++ +LA+ + C E++ +++ + T ++F P+EK+ +A + R KF
Sbjct: 507 GYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFL 566
Query: 995 QPEGDHLTLL-AVYEAWKAKNFSGP-WCFENFVQSRSLRRAQDVRKQLLS--IMDKYKLD 1050
EGD LT L A+ + ++ + S WC +NF+ R+L+ D+RKQL + D ++L+
Sbjct: 567 HSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQLREHCLKDGWELN 626
Query: 1051 VMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYH 1110
S N + + +G+ + A P YRT++ NQ + IHPSS+LF ++ + ++YH
Sbjct: 627 -SSPEVNSENLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYH 685
Query: 1111 ELVMTTKEYMREVTVIDPKWLVDLAPRF 1138
ELV TTK Y+R V+ I WL +AP +
Sbjct: 686 ELVFTTKSYVRGVSSIRSNWLNAVAPHY 713
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 1451 (515.8 bits), Expect = 1.3e-148, P = 1.3e-148
Identities = 305/657 (46%), Positives = 430/657 (65%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGC 573
S+ + LPI + K+ ++ V V +V+G+TGSGKTTQ+ QYL +AG+ T GK I
Sbjct: 14 SLYKPASLLPIARHKQSILYLVETYPVTIVVGQTGSGKTTQLPQYLDQAGWCTEGKAIAV 73
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
TQPRRVAA +VA RVAEE C+LGE+VGY+IRFED T T IK++TDGMLLRE L+D
Sbjct: 74 TQPRRVAATTVAARVAEEMRCKLGEDVGYSIRFEDRTSAMTRIKFLTDGMLLREALVDPL 133
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFF----- 688
LS+YSVIM+DEAHER++ TD+L G+LK+++KRRP+LR+IV+SATL AE F YF
Sbjct: 134 LSRYSVIMVDEAHERSLSTDILLGILKKILKRRPELRIIVSSATLQAEDFLRYFAGDESQ 193
Query: 689 ---------NCN-IFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFL 738
N I +I GR +PV+ L+ + +Y++ S+ TV IHL E EGDIL+FL
Sbjct: 194 QGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAENYVERSVKTVFDIHLQEGEGDILIFL 253
Query: 739 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 798
TG+EEI+ A Q + ER L L+ LP+Y+ L ++ Q +F+PAP RKVVV+TN
Sbjct: 254 TGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTRKVVVSTN 313
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAEAS+TI+GI YV+D GFAK Y+P G+++L PIS+A+A QRAGRAGRT PGKC+
Sbjct: 314 IAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGRTKPGKCF 373
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYT+ AY ++ +IPEIQR NL + +KA+GI++++ FDF+ P +I A E
Sbjct: 374 RLYTQHAYE-QLPDATIPEIQRSNLAPVIMQLKALGIDNIVRFDFLTSPPADLVIRAFEL 432
Query: 919 LYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIF 976
LYSLGA+D+ LTK LG +MAE +DP ++K+LL++ GC EILTI AM+ G ++
Sbjct: 433 LYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCLSEILTIAAMVSLQGAVW 492
Query: 977 YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS-GPWCFENFVQSRSLRRAQD 1035
+ + ++ R KF EGDHLT L VY+A+ K WC +N + RSL RA
Sbjct: 493 VQHDGDKKSSESSRRKFAVEEGDHLTYLNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVS 552
Query: 1036 VRKQLLSIMDKYKLDV----------MSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTL 1085
VR QL ++++ + V K KI++ +T G+F HAAR P ++T+
Sbjct: 553 VRAQLKRYLERFGIQVDETFPSHYNKSDLSKPAEKIQRCLTTGYFAHAARMQPDGTFKTV 612
Query: 1086 VENQPVYIHPSSALFQRQPDWVIYHELVMT-TKEYMREVTVIDPKWLVDLAPRFFKV 1141
++ HPSS +F R+ DWVI+HE++ T K ++R++T I+ +L++ AP ++ +
Sbjct: 613 SGGMTLHAHPSSLMFNRKADWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYYNM 669
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 293/634 (46%), Positives = 412/634 (64%)
Query: 519 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRR 578
QR+ LPI++ + L+ + + V+IGETGSGKTTQ+ QYL EAG +G I TQPRR
Sbjct: 20 QRRELPIFQARGPLLSQLRGLECAVLIGETGSGKTTQIPQYLYEAGIGRQGIIAVTQPRR 79
Query: 579 VAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYS 638
VAA+S+A RV++E LG+ VGY +RF+D T +T IK++TDGMLLRE + D L +YS
Sbjct: 80 VAAISLATRVSDEKRTELGKLVGYTVRFDDLTSDETRIKFLTDGMLLREAIGDPILRKYS 139
Query: 639 VIMLDEAHERTIHTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAEKFSGYFFNCNIF 693
V++LDEAHERTIHTDVLFG++K K+R +L ++IV SAT+D ++FS YF +
Sbjct: 140 VVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFSQYFNGAPVL 199
Query: 694 TIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG-DILLFLTGQEEIDFACQSLY 752
+ GR P+++ YTKQP+SDYL A+L++V QIH P DIL+FLTGQEEI+ ++
Sbjct: 200 YLEGRQHPIQVFYTKQPQSDYLQAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMTKTCR 259
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
+ K L P++ ++P+Y++LP Q R+F AP G RKV+++TNIAE S+TI GI YV
Sbjct: 260 DIAKHLPDGCPQMTVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYV 319
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
+D G K YNP+ GL+ L + +S+A A QR GRAGR G CYRLYTE + +
Sbjct: 320 VDTGMVKAKKYNPEIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFE-KFDK 378
Query: 873 TSIPEIQ---RINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
++PEIQ R NL L + A+ I ++L+FDFM PSP A+ +A+EQL LGA++++
Sbjct: 379 MTVPEIQSLCRCNLASVLLQLLALRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKE 438
Query: 930 ---LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQA 986
+LT LGRKMA FPL+P SK +L S C++EILTI++++ ++ Y P ++ +
Sbjct: 439 DQLVLTPLGRKMAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDEV 498
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDK 1046
R KF EGDHLTLL VY A+K + + WC ENFV R++ DVR QL I K
Sbjct: 499 QSVRKKFISSEGDHLTLLNVYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQLRDICVK 558
Query: 1047 YKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1106
+ + S+ + IR+ + F +AA P Y T+ +Q V IHPSS LF +P
Sbjct: 559 LSMPMESSRSDTANIRRCLAHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLFHCKPSC 618
Query: 1107 VIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
V+Y+ L+ T K YMR++ V+D +WL D AP +F+
Sbjct: 619 VVYNGLLHTNKCYMRDLCVVDAEWLYDAAPDYFR 652
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 1428 (507.7 bits), Expect = 3.5e-146, P = 3.5e-146
Identities = 291/635 (45%), Positives = 407/635 (64%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCT 574
++++QR++LPI++ + +L+ + + V+IGETGSGKTTQ+ QYL E G + I T
Sbjct: 73 AVEQQRRNLPIFQARGQLLAQLRNLDSAVLIGETGSGKTTQIPQYLYEGGIGRQAIIAVT 132
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
QPRRVAA+S+A RV++E LG+ VGY +RF+D T DT IK++TDGMLLRE + D L
Sbjct: 133 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSDDTKIKFLTDGMLLREAISDCLL 192
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAEKFSGYFFN 689
+YS I+LDEAHERT+HTDVLFG++K KRR +L +++V SAT+D + FS YF
Sbjct: 193 RKYSCIILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNG 252
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG-DILLFLTGQEEIDFAC 748
+ + GR P++I YTKQP+ DYL A+L++V QIH P DIL+FLTGQEEI+
Sbjct: 253 APVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIHQEAPSSHDILVFLTGQEEIEAMS 312
Query: 749 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDG 808
++ + K L P +++LP+Y++LP Q R+F AP G RKV+++TNIAE S+TI G
Sbjct: 313 KTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITG 372
Query: 809 IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 868
I YV+D G K YNP GL+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 373 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE- 431
Query: 869 EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE- 927
+ ++PEIQR NL L + AM I ++L+FDFM PSP + +A+ QL LGAL+
Sbjct: 432 KFEKMTVPEIQRCNLASVMLQLLAMKIPNVLTFDFMSKPSPDHIQAAIAQLELLGALEHR 491
Query: 928 EG--LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
+G LT +GRKMA FPL+P +K +L S C++EILTI+A++ +I Y P ++ +
Sbjct: 492 DGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTEEILTIVALLSVDSILYNPPSRRDE 551
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
R KF EGDHLTLL VY +K + WC ENFV S+++ +VR QL I
Sbjct: 552 VQSVRKKFVSSEGDHLTLLNVYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQLRDICI 611
Query: 1046 KYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1105
K + ++S+ + IR+ + F A P Y T +QPV IHPSS LF +P
Sbjct: 612 KMSMPIVSSRGDTESIRRCLAHSLFTSTAELQPDGSYATTDTHQPVAIHPSSVLFHCKPA 671
Query: 1106 WVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
V+Y EL+ T+K YMR++ V+D +WL + AP FF+
Sbjct: 672 CVVYTELLFTSKCYMRDLCVVDAEWLYEAAPDFFR 706
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 1422 (505.6 bits), Expect = 1.5e-145, P = 1.5e-145
Identities = 286/635 (45%), Positives = 407/635 (64%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCT 574
+++ QR+SLPI++ + +L+ + + V+IGETGSGKTTQ+ QYL E G + +G I T
Sbjct: 66 AVELQRRSLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVT 125
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
QPRRVAA+S+A RV++E LG+ VGY +RF+D T DT IK++TDGMLLRE + D L
Sbjct: 126 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLL 185
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAEKFSGYFFN 689
+YS ++LDEAHERTIHTDVLFG++K KRR +L ++IV SAT+D + FS YF
Sbjct: 186 RKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNG 245
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG-DILLFLTGQEEIDFAC 748
+ + GR P+++ YTKQP++DYL A+L++V QIH P DIL+FLTGQEEI+
Sbjct: 246 APVLYLEGRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMS 305
Query: 749 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDG 808
++ + K L P +++LP+Y++LP Q R+F AP G RKV+++TNIAE S+TI G
Sbjct: 306 KTCRDIAKHLPDGCPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITG 365
Query: 809 IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 868
I YV+D G K YNP GL+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 366 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE- 424
Query: 869 EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL--- 925
+ ++PEIQR NL L + AM + ++L+FDFM PSP + +A+ QL LGAL
Sbjct: 425 KFDKMTVPEIQRCNLASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHK 484
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
D++ LT +GRKMA FPL+P +K +L S C++EILTI++++ ++ + P ++ +
Sbjct: 485 DDQLTLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREE 544
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
R KF EGDH+TLL +Y +K + WC ENFV S+++ +VR QL I
Sbjct: 545 VQGVRKKFISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICL 604
Query: 1046 KYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1105
K + + S+ + +R+ + F A P Y T +QPV IHPSS LF +P
Sbjct: 605 KMSMPIASSRGDVESVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPA 664
Query: 1106 WVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
V+Y EL+ T K YMR++ VID +WL + AP +F+
Sbjct: 665 CVVYTELLYTNKCYMRDLCVIDAQWLYEAAPEYFR 699
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 1417 (503.9 bits), Expect = 5.1e-145, P = 5.1e-145
Identities = 286/635 (45%), Positives = 406/635 (63%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCT 574
+++ QR+SLPI++ + +L+ + + V+IGETGSGKTTQ+ QYL E G + +G I T
Sbjct: 57 ALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVT 116
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
QPRRVAA+S+A RV++E LG+ VGY +RFED T DT IK++TDGMLLRE + D L
Sbjct: 117 QPRRVAAISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLL 176
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDL-----RLIVTSATLDAEKFSGYFFN 689
+YS ++LDEAHERTIHTDVLFG++K KRR +L ++IV SAT+D + FS YF
Sbjct: 177 RKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNR 236
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG-DILLFLTGQEEIDFAC 748
+ + GR P++I YTKQP+ DYL A+L++V QIH P DIL+FLTGQEEI+
Sbjct: 237 APVLYLEGRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMS 296
Query: 749 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDG 808
++ + + L P +++LP+Y++LP Q R+F AP G RKV+++TNIAE S+TI G
Sbjct: 297 KTCRDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITG 356
Query: 809 IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 868
I YV+D G K YNP GL+ L + +S+ A QR GRAGR G CYRLYTE +
Sbjct: 357 IKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE- 415
Query: 869 EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL--- 925
+ ++PEIQR NL L + AM + ++L+FDFM PSP + +A+ QL LGAL
Sbjct: 416 KFEKMTVPEIQRCNLASVILQLLAMKVPNVLTFDFMSKPSPDHIEAAIAQLDLLGALEHK 475
Query: 926 DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
D++ LT +GRKMA FPL+P +K +L S C++EILTI++++ ++ Y P ++ +
Sbjct: 476 DDQLTLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDE 535
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
R KF EGDH+TLL +Y +K + WC ENFV S+++ +VR QL I
Sbjct: 536 VQSVRKKFISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICL 595
Query: 1046 KYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1105
K + +MS+ + +R+ + F + A Y T +QPV IHPSS LF +P
Sbjct: 596 KMSMPIMSSRGDMESVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPA 655
Query: 1106 WVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
V+Y L+ T K YMR++ V+D +WL + AP +F+
Sbjct: 656 CVVYTSLLYTNKCYMRDLCVVDAEWLYEAAPDYFR 690
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 295/657 (44%), Positives = 434/657 (66%)
Query: 512 SKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK- 570
+ L+IQ+QR LPI+K + ++ + ++++GETG GK+TQV Q+L EAG+ G+
Sbjct: 66 ASLNIQQQRIRLPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQ 125
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I TQPRRVA +++A RVAEE C LG +VGY +RF+D + DT +K+MTDG+LLREIL
Sbjct: 126 IVITQPRRVAVVTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILA 185
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF-FN 689
D LS+YS+IM+DEAHER+ +TD+L GLL+++++ R DLR+IV+SATLDAE F +F N
Sbjct: 186 DPLLSKYSIIMIDEAHERSCNTDILLGLLRKIIQIRNDLRIIVSSATLDAELFKDFFEMN 245
Query: 690 ---------CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTG 740
I ++ GRT PV + +TK DY +++ TV+ IH E GDIL+FLTG
Sbjct: 246 ETGNSDKDTAGIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTG 305
Query: 741 QEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIA 800
Q+E++ C+ L E + G KN L ++P Y ALP+ Q + FD P G RKVVVATNIA
Sbjct: 306 QDEVEDVCEKLRE-LAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIA 364
Query: 801 EASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRL 860
EAS+TI GI YVID G+ K + G+++L+ +S+ASA+QRAGRAGR PGKCYRL
Sbjct: 365 EASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRL 424
Query: 861 YTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLY 920
Y ES + T +PEIQR + T L +KA+G+ ++ F ++ PP A+I+ +E LY
Sbjct: 425 YPESEFERFAEGT-VPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLY 483
Query: 921 SLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP 979
+LGA+DE LT LG +MAEFPL P SK LL S + GCS E++TI+AM+Q ++F P
Sbjct: 484 ALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITP 543
Query: 980 REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
++ QAD R KF EGDH+T+L V+ + S WC ++FV R L RA +VR Q
Sbjct: 544 YRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQ 603
Query: 1040 LLSIMDKYKLD-VMSAGK-NFTK-IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHP- 1095
L+ ++ +++++ V S G N ++ IR+ + GFF AA+ Y T+ E+ P ++
Sbjct: 604 LVRLLKRFEIEKVSSRGLINCSENIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKG 663
Query: 1096 SSALFQRQ-PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRK 1151
SS +F++ P WVI+ E++ ++ +R+VTVI+P+WL +LAP +++ ++++++
Sbjct: 664 SSIMFKKDYPKWVIFTEVM---QDSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKR 717
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 1389 (494.0 bits), Expect = 4.8e-142, P = 4.8e-142
Identities = 282/604 (46%), Positives = 388/604 (64%)
Query: 546 GETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 605
GETGSGKTTQ+ QYL E G +G I TQPRRVAA+S+A RV++E LG+ VGY +R
Sbjct: 6 GETGSGKTTQLPQYLYEGGIGRQGVIAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVR 65
Query: 606 FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKR 665
F+D + DT IK++TDGMLLRE + D L +YS I+LDEAHERT+HTDVLFG++K +R
Sbjct: 66 FDDVSSEDTRIKFLTDGMLLREAISDSLLRKYSCIILDEAHERTVHTDVLFGVVKAAQRR 125
Query: 666 RPDLR-----LIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLI 720
R +LR +IV SAT+D + FS YF ++ + GR P+++ YTKQP+ DYL A+L+
Sbjct: 126 RKELRKLPLKVIVMSATMDVDLFSQYFNGASVLYLEGRQHPIQVFYTKQPQQDYLHAALV 185
Query: 721 TVLQIHLTEPEG-DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQ 779
+V QIH P DIL+FLTGQEEI+ ++ + K L P +++LP+Y++LP Q
Sbjct: 186 SVFQIHQEAPSSQDILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQ 245
Query: 780 SRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQ 839
R+F AP G RKV++ATNIAE S+TI GI YV+D G K YNP GL+ L + +S+
Sbjct: 246 LRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSK 305
Query: 840 ASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLL 899
A QRAGRAGR G CYRLYTE+ + + ++PEIQR NL L + AM + ++L
Sbjct: 306 TQAWQRAGRAGREDSGICYRLYTENEFE-KFEKMTVPEIQRCNLASVLLQLLAMKVPNVL 364
Query: 900 SFDFMDPPSPQALISAMEQLYSLGAL---DEEGLLTKLGRKMAEFPLDPPLSKMLLASVD 956
+FDFM PSP + +A+ QL LGAL D + LT +GRKMA FPL+P +K +L S
Sbjct: 365 TFDFMSKPSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRKMAAFPLEPKFAKTILLSPK 424
Query: 957 LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS 1016
C++EILTI++++ ++ Y P ++ + R KF EGDH+TLL +Y +K+
Sbjct: 425 FHCTEEILTIVSLLSVDSVLYNPPSRRDEVQAMRKKFLSSEGDHITLLNIYRTFKSLGGD 484
Query: 1017 GPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARK 1076
WC ENFV SR++ A +VR QL I K + ++S + IR+ + F AA
Sbjct: 485 KDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCRGDVESIRRCLAHSLFMSAAEL 544
Query: 1077 DPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
P Y T QPV IHPSSALF +P V+Y EL+ T+K YMR++ V+ +WL + AP
Sbjct: 545 QPDGTYTTTDSRQPVAIHPSSALFHCRPACVVYTELLHTSKCYMRDLCVVAAEWLYEAAP 604
Query: 1137 RFFK 1140
+F+
Sbjct: 605 DYFR 608
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 963 (344.1 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 204/473 (43%), Positives = 296/473 (62%)
Query: 692 IFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSL 751
I +I GRT+PV+I Y ++ S+Y+ ++ T++ IH T+P GDIL+FLTGQEEI+ Q+L
Sbjct: 247 ILSIEGRTYPVDIHYLEESTSNYIQTTIQTIIDIHTTQPPGDILVFLTGQEEIEKLIQTL 306
Query: 752 YERMKGLGK---------NVP--ELIILPVYSALPSEMQSRIFDPAPPGK--RKVVVATN 798
++ + L + P + +LP+YS L Q ++F+ K RK++++TN
Sbjct: 307 DDKFEILRQYHQQHHHQQQQPFMKYSLLPMYSGLSINKQIKVFESVGDSKKIRKIIISTN 366
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAE S+TIDG+ YV+D GF K Y+ + GL+SLVI P S++SA QRAGRAGR+ GKCY
Sbjct: 367 IAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRAGRSRAGKCY 426
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYTE Y + +IPEIQR NL T L +KA+GI+++L+FDF+ P +LI +E
Sbjct: 427 RLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFDFISQPPSSSLIRGLEV 486
Query: 919 LYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLG--CSDEILTIIAMIQTGNI 975
LY LGALD+ G LT G MAEFP DP SKM++ S G CSDE +TI AM+ +
Sbjct: 487 LYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFNCSDECITITAMLNIQGL 546
Query: 976 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQD 1035
F K R EGDHLTLL ++ ++ + S WC ++ + ++++R
Sbjct: 547 FTNQNHKS------RKHLLVKEGDHLTLLNIFNSFISNQSSPQWCNQHQINYKAMQRVLQ 600
Query: 1036 VRKQLLSIMDKYKLDVMSA-GKNFTK------IRKAITAGFFFHAARKDPQEGYRTLVEN 1088
VRKQLL+ KY ++V+S N + IRKAI +GFF +AA+ P Y+T+ E
Sbjct: 601 VRKQLLAYAKKYSINVISCFDSNNNREQCSNLIRKAIVSGFFTNAAQLQPDGSYQTIREK 660
Query: 1089 QPVYIHPSSAL-FQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
+++HP+S L P WVI++E+ +TTKEYM++VT I+P WL ++AP ++K
Sbjct: 661 HKLWLHPTSVLCLSNSPQWVIFNEVTITTKEYMKDVTSIEPNWLFEIAPHYYK 713
Score = 442 (160.7 bits), Expect = 1.7e-141, Sum P(2) = 1.7e-141
Identities = 98/205 (47%), Positives = 144/205 (70%)
Query: 501 AFGKA-LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQY 559
+FG + KL+IQ+QR SLPIY+ +K ++ + LV+IG TG GK+TQ+ QY
Sbjct: 32 SFGNDNFIYNSNQKLTIQQQRISLPIYQNRKHILYLLEKYSTLVIIGNTGCGKSTQIPQY 91
Query: 560 LAEAGYTTRGK-IGCTQPRRVAAMSVAKRVAEEFGCR-LGEEVGYAIRFED-CTGPDTVI 616
L E+G++ + I CTQPRRVAA+S+A+RVA+E G + +G+ VGY++RF++ + +T I
Sbjct: 92 LFESGWSDGFRTILCTQPRRVAAISLAERVAQEMGEQHVGKTVGYSVRFDEKISDIETRI 151
Query: 617 KYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD-------- 668
KY+TDGML+RE+++D L +YSVIM+DEAHER++ TD+L GLLK++ K+R
Sbjct: 152 KYVTDGMLIREMMLDPLLLKYSVIMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNND 211
Query: 669 --LRLIVTSATLDAEKFSGYFFNCN 691
L+LI++SATL+A F FFN N
Sbjct: 212 NSLKLIISSATLNANDFFN-FFNYN 235
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 1379 (490.5 bits), Expect = 5.5e-141, P = 5.5e-141
Identities = 291/632 (46%), Positives = 408/632 (64%)
Query: 494 MPEWK---KDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGS 550
+PE K + +AL ++ L+IQE R+ LP+++ K EL+Q + NQVL+++GETGS
Sbjct: 191 LPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGS 250
Query: 551 GKTTQVTQYLAEAGYTTRGK--IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFED 608
GKTTQ+ QYL E G+T +GK I TQPRRVAA SVA RVA+E LG+EVGY IRFED
Sbjct: 251 GKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFED 310
Query: 609 CTGPD-TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP 667
T P+ TV+KYMTDGMLLRE L D LS+YS IM+DEAHERT+ TD+L GLLK ++ +RP
Sbjct: 311 KTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRP 370
Query: 668 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHL 727
L+L+++SAT++A+KFS +F NC IF +PGR +PV+I YT QPE++Y+ A++ T+ QIH
Sbjct: 371 TLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHT 430
Query: 728 TEP-EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPA 786
T+ GDIL+FLTGQEEI+ L E M LG ++II P+Y+ LP E Q +IF P
Sbjct: 431 TQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPT 490
Query: 787 PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 846
P RKVV+ATNIAE SLTIDGI YVIDPGF K+N Y P G+ L+ P S+AS QRA
Sbjct: 491 PENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRA 550
Query: 847 GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDP 906
GRAGR GPGKC+R++T+ +Y +E+ PEI R NL T L + ++G+ DL+ F MD
Sbjct: 551 GRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDK 610
Query: 907 PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVD----LGCSDE 962
PS L ++E LY LGAL+ +G +T+LG+ M EFP +P +K+L + G +E
Sbjct: 611 PSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEE 670
Query: 963 ILTIIAMI-QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1021
LTI++M+ +T ++F + D + + E DH+ L ++ W+ FS WC
Sbjct: 671 CLTIVSMLHETPSLFIGQKR-----DAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQ 725
Query: 1022 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS----------AGKNFTKIRKAITAGFFF 1071
++ +Q +++ R +++R QL +K L + AG +I + +GF
Sbjct: 726 DHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFISGFPM 785
Query: 1072 HAARKDPQEGYRTLVENQP---VYIHPSSALF 1100
+ + P GY+T+ + V +HP+S LF
Sbjct: 786 NIVQLGPT-GYQTMGRSSGGLNVSVHPTSILF 816
Score = 137 (53.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 43/149 (28%), Positives = 80/149 (53%)
Query: 1021 FENFVQSRSLR----RAQDVRKQLLSIMDKYKLDVMS-AGKNFTKIRKAITAGFFFHAAR 1075
F+ ++ R++R R + + L+ D+ ++ + + AG +I + +GF + +
Sbjct: 731 FKTMLRVRNIRNQLFRCSE-KVGLVEKNDQARMKIGNIAGYINARITRCFISGFPMNIVQ 789
Query: 1076 KDPQEGYRTLVENQP---VYIHPSSALF-------QRQPDWVIYHELVMTTKEYMREVTV 1125
P GY+T+ + V +HP+S LF QR +V+Y +L++T+KE++R+ V
Sbjct: 790 LGPT-GYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLV 848
Query: 1126 IDPK--WLVDLAPRFFK--VADPTKMSKR 1150
I PK WL+D+ P+ FK + D T +R
Sbjct: 849 I-PKEEWLIDMVPQIFKDLIDDKTNRGRR 876
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 716 (257.1 bits), Expect = 3.7e-138, Sum P(3) = 3.7e-138
Identities = 149/328 (45%), Positives = 216/328 (65%)
Query: 463 DLN-RPWEDPMPETGERHLAQELRGVGL-SAYDMPEWKKDA---FGKALTFGQRSKLSIQ 517
D N R +E E E L + V L S Y M E +K+ F ++ I
Sbjct: 373 DSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKII 432
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 577
++R+ LPIY + ++++A+ +N++L+++GETGSGK+TQ+TQYL E Y G I CTQPR
Sbjct: 433 DERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPR 492
Query: 578 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 637
R+A +++A RVAEE ++G+EVGY IRF++ T T I YMTDGM LR +L + L
Sbjct: 493 RIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDI 552
Query: 638 SVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCN-IFTIP 696
SV+++DEAHER +HTDV+ ++K + R ++R++++SATLDAEK S YF NC IF +P
Sbjct: 553 SVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYF-NCAPIFYVP 611
Query: 697 GRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 756
GR + V+I YT ES+Y+ A +IT+LQIH+T+ +GDIL+FL GQ EI+ Q L ++
Sbjct: 612 GRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLN 671
Query: 757 GLGKNVPELIILPVYSALPSEMQSRIFD 784
L L+ILP+YS+LP E Q+RIF+
Sbjct: 672 ELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 707 (253.9 bits), Expect = 3.7e-138, Sum P(3) = 3.7e-138
Identities = 145/363 (39%), Positives = 230/363 (63%)
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
+RK++++TNI E S+TID I YVID G KQ +YNP G++SLV P S+AS QR GRA
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GR GKC+RL+T+ ++ ++S SIPEIQR + L +K++G++D+++FDF+DPPSP
Sbjct: 862 GRKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSP 920
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVD-LGCSDEILTIIA 968
+I +E LYSLGAL++EG LT+ GRKMAEFP D SKM+L++ + C DEIL + +
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVAS 980
Query: 969 MI-QTGNIFYRPREKQAQADQKRAKFF-QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1026
M+ NIFY + K+ +A+ + F + GD L L +Y+ + NFS +C+++F+Q
Sbjct: 981 MLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQ 1040
Query: 1027 SRSLRRAQDVRKQLLSIMDKYKLDVMSAG----KNFTKIRKAITAGFFFHAARKDPQEGY 1082
+L + +DV+ QLLSI +K + + + G ++ I+K+I + FF +AA +
Sbjct: 1041 YHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTEL 1100
Query: 1083 RTLVENQPVYIHPSSALFQR------QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
+ + NQ V I+P+S LF++ + +I++E++ K Y+R ++ L +A
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIAD 1160
Query: 1137 RFF 1139
+F
Sbjct: 1161 FYF 1163
Score = 38 (18.4 bits), Expect = 3.7e-138, Sum P(3) = 3.7e-138
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 337 IVEEDGVVPSRRPLKRMSSPEK 358
+ ++D + +R+ +KR S EK
Sbjct: 191 VFDDDIITTNRKSIKRESFEEK 212
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 716 (257.1 bits), Expect = 3.7e-138, Sum P(3) = 3.7e-138
Identities = 149/328 (45%), Positives = 216/328 (65%)
Query: 463 DLN-RPWEDPMPETGERHLAQELRGVGL-SAYDMPEWKKDA---FGKALTFGQRSKLSIQ 517
D N R +E E E L + V L S Y M E +K+ F ++ I
Sbjct: 373 DSNKRSFEKKESELNENGLTDVVEFVHLESFYGMNEKEKELEKLFEDIKKRKEKKMKKII 432
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 577
++R+ LPIY + ++++A+ +N++L+++GETGSGK+TQ+TQYL E Y G I CTQPR
Sbjct: 433 DERKRLPIYSYRYDILKAIKNNKILILVGETGSGKSTQLTQYLYECKYHMYGNIICTQPR 492
Query: 578 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 637
R+A +++A RVAEE ++G+EVGY IRF++ T T I YMTDGM LR +L + L
Sbjct: 493 RIACIAIANRVAEEMNVKIGKEVGYVIRFQNKTSEATKIMYMTDGMFLRLLLYNPTLEDI 552
Query: 638 SVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCN-IFTIP 696
SV+++DEAHER +HTDV+ ++K + R ++R++++SATLDAEK S YF NC IF +P
Sbjct: 553 SVLIIDEAHERALHTDVILPIVKDICNFRENIRVVISSATLDAEKISTYF-NCAPIFYVP 611
Query: 697 GRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 756
GR + V+I YT ES+Y+ A +IT+LQIH+T+ +GDIL+FL GQ EI+ Q L ++
Sbjct: 612 GRKYNVDIYYTINNESNYISAIVITILQIHITQGKGDILVFLPGQYEIELVQQELENKLN 671
Query: 757 GLGKNVPELIILPVYSALPSEMQSRIFD 784
L L+ILP+YS+LP E Q+RIF+
Sbjct: 672 ELAPKYRNLVILPIYSSLPVEYQARIFE 699
Score = 707 (253.9 bits), Expect = 3.7e-138, Sum P(3) = 3.7e-138
Identities = 145/363 (39%), Positives = 230/363 (63%)
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
+RK++++TNI E S+TID I YVID G KQ +YNP G++SLV P S+AS QR GRA
Sbjct: 802 RRKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRA 861
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSP 909
GR GKC+RL+T+ ++ ++S SIPEIQR + L +K++G++D+++FDF+DPPSP
Sbjct: 862 GRKRDGKCFRLFTKKSFI-DLSDNSIPEIQRCEISSMILLLKSLGMDDIINFDFLDPPSP 920
Query: 910 QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVD-LGCSDEILTIIA 968
+I +E LYSLGAL++EG LT+ GRKMAEFP D SKM+L++ + C DEIL + +
Sbjct: 921 IVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMILSAAEKYNCVDEILNVAS 980
Query: 969 MI-QTGNIFYRPREKQAQADQKRAKFF-QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1026
M+ NIFY + K+ +A+ + F + GD L L +Y+ + NFS +C+++F+Q
Sbjct: 981 MLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCYDHFLQ 1040
Query: 1027 SRSLRRAQDVRKQLLSIMDKYKLDVMSAG----KNFTKIRKAITAGFFFHAARKDPQEGY 1082
+L + +DV+ QLLSI +K + + + G ++ I+K+I + FF +AA +
Sbjct: 1041 YHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINNIKKSIVSAFFTNAALPVNKTEL 1100
Query: 1083 RTLVENQPVYIHPSSALFQR------QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
+ + NQ V I+P+S LF++ + +I++E++ K Y+R ++ L +A
Sbjct: 1101 KIIKLNQVVSIYPNSVLFKKNIMEENENVCIIFYEVIKLNKSYIRHNIPVNKNLLFQIAD 1160
Query: 1137 RFF 1139
+F
Sbjct: 1161 FYF 1163
Score = 38 (18.4 bits), Expect = 3.7e-138, Sum P(3) = 3.7e-138
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 337 IVEEDGVVPSRRPLKRMSSPEK 358
+ ++D + +R+ +KR S EK
Sbjct: 191 VFDDDIITTNRKSIKRESFEEK 212
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 1348 (479.6 bits), Expect = 1.1e-137, P = 1.1e-137
Identities = 276/603 (45%), Positives = 407/603 (67%)
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
IG TQPRR+AA +VA RVAEE+G +G+EVGY+IRFED T T IK++TDG+L+RE L+
Sbjct: 70 IGVTQPRRIAATTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALV 129
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D LS+YS++M+DEAHER++ TD+L GLLK++ K+RP+LR+I++SATL AE+F +F +
Sbjct: 130 DPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFFSST 189
Query: 691 ----------------NIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDI 734
I ++ GRT+P++ILY + P DYL ++ TVL +H EP+GDI
Sbjct: 190 LGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAEDYLQRAVSTVLDVHENEPDGDI 249
Query: 735 LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVV 794
L+FLTG++EI+ A ++ ER L L+ LP++S L +E Q IF+ AP RKV+
Sbjct: 250 LVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTRKVI 309
Query: 795 VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGP 854
+TNIAEAS+TI GI YV+D GF K YNPK G+++L PIS+A+A QRAGRAGRT P
Sbjct: 310 FSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGRTKP 369
Query: 855 GKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALIS 914
GKC+RLYTE +Y + +S T+IPE+QR NL L +KA+GI+++L FDF+ PP + +
Sbjct: 370 GKCFRLYTEESYTS-LSDTNIPEVQRSNLAPFILQLKALGIDNVLHFDFLTPPPAELMTK 428
Query: 915 AMEQLYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 973
A+E LYSLGALD+ LTK LG +MAE +DP ++K LL++ GC E+LTI AM G
Sbjct: 429 ALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFGCLSEMLTIAAMTSAG 488
Query: 974 -NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW--KAKNFSGPWCFENFVQSRSL 1030
+++ + ++ Q + +R KF EGDHLT L VY+A+ K + SG +C EN + +++
Sbjct: 489 GDVWIQHEGERKQFESRRRKFAAGEGDHLTFLNVYQAFVTKGRKESG-FCHENLLNYKTM 547
Query: 1031 RRAQDVRKQLLSIMDKYKLDV---MSAGKN------FT--KIRKAITAGFFFHAARKDPQ 1079
RA +R QL ++++ + V +++GK T +IR+ +T G+F HAAR
Sbjct: 548 SRAVSIRAQLKRYLERFGIRVDETLASGKTRGASPGVTGEQIRRCLTTGYFAHAARMQAD 607
Query: 1080 EGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMT-TKEYMREVTVIDPKWLVDLAPRF 1138
++T+ ++ HPSS +F R+ DWVI+HE++ T K ++R+++ ++ WL++ AP F
Sbjct: 608 GTFQTVQGGTTLHAHPSSLMFNRKADWVIFHEVMETGAKTFIRDISKVEKCWLLEYAPDF 667
Query: 1139 FKV 1141
++V
Sbjct: 668 YQV 670
Score = 505 (182.8 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 96/166 (57%), Positives = 132/166 (79%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGCTQPRRVAA 581
LPI + K L+ V N V VV+G+TGSGKTTQ+ Q+L +AG+ + GK IG TQPRR+AA
Sbjct: 21 LPIARHKDSLLYVVESNPVTVVVGQTGSGKTTQIPQFLEKAGWCSDGKLIGVTQPRRIAA 80
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+VA RVAEE+G +G+EVGY+IRFED T T IK++TDG+L+RE L+D LS+YS++M
Sbjct: 81 TTVALRVAEEYGSEVGKEVGYSIRFEDVTSEATRIKFLTDGLLIREALVDPLLSRYSIVM 140
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF 687
+DEAHER++ TD+L GLLK++ K+RP+LR+I++SATL AE+F +F
Sbjct: 141 VDEAHERSVSTDILLGLLKKIRKKRPELRIIISSATLQAEQFLAFF 186
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
Identities = 288/647 (44%), Positives = 414/647 (63%)
Query: 505 ALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAG 564
A F + + EQR+ LPI + + +++ + +QV++++GETGSGK+TQV QYL E G
Sbjct: 29 AFVFNVNHNMGLMEQRERLPIRQYRDQILYCLEKHQVVILVGETGSGKSTQVPQYLYEWG 88
Query: 565 YTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 624
+ T+G IG T+PRRV+ +++A RVA+E G +G+ VGY +RF + T IK+MT+G+L
Sbjct: 89 WHTKGLIGITEPRRVSTVTLANRVAQERGELVGDTVGYVVRFLESMSSCTKIKFMTEGIL 148
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LRE+L D L+QY VI++DEAHER + TD++ GLLK+++++R L+LI++SAT+DA FS
Sbjct: 149 LREVLADPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSSLKLIISSATIDASFFS 208
Query: 685 GYFF-----NCNI-FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFL 738
+F ++ +I GR PV Y +P +DY+ ++ TV ++H EP GDIL FL
Sbjct: 209 EFFSWPGSGEVSVKLSIEGRMHPVSNFYLNEPCADYVKETVETVWKLHQKEPPGDILAFL 268
Query: 739 TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 798
TGQEE+ A L E + + L +LP+Y ++ S Q +F P G RKVV+ATN
Sbjct: 269 TGQEEVLEALDLLREYIASSEQE--NLKVLPMYGSMSSTDQLSVFFTPPKGTRKVVLATN 326
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAE S+TI GI YVID G+ K YNPK DSLVI P+S+ASA QRAGRAGR PGK Y
Sbjct: 327 IAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRMRPGKVY 386
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLYT+S Y ++P PE++R L L +KA+GI ++L FDF PP Q L+SA+E
Sbjct: 387 RLYTKSDYE-ALAPRQPPEMRRSELSGAILQLKALGIGNILRFDFPSPPPAQNLLSALES 445
Query: 919 LYSLGALDEEGLLTK-LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY 977
L++L A+DE+G LTK +G +AE P LSKML S +GCS+EI+TIIA++Q +IF
Sbjct: 446 LFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFS 505
Query: 978 RPREKQAQADQKRA--KFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQD 1035
RP AQ + A KF EGD +T+L Y + + + +C + F+ R+L+RA
Sbjct: 506 RPASAVAQQSGRIAHRKFEVAEGDFITMLNAYTGFVEEGMTKEFCGQYFLIYRNLKRAHS 565
Query: 1036 VRKQLLSIM-DKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIH 1094
+R+QL+++ KY + + S + K+ K ITAGFF A YR + + IH
Sbjct: 566 LREQLITVARKKYGIPIFSCKGDVEKLCKCITAGFFTQVAYLHHSGVYRQISSGTELAIH 625
Query: 1095 PSSALFQR-QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
P+S L+ Q +V+Y EL+ TTK +M VTVI +WL +LAP +++
Sbjct: 626 PNSTLYTLPQAQYVVYGELLQTTKLFMNYVTVIKREWLTELAPHYYQ 672
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
Identities = 256/548 (46%), Positives = 372/548 (67%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+LPI + ++++++ V N V+V+IGETGSGK+TQ++Q L GYT G I TQPRRVAA
Sbjct: 3 NLPILQFEEKIVETVEKNSVVVIIGETGSGKSTQLSQILHRHGYTKSGVIAITQPRRVAA 62
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVA+E LGE+VGYAIRFED T T IKY+TDG+LLRE L + L YSVI+
Sbjct: 63 VSVARRVAQELDVPLGEDVGYAIRFEDRTTSKTRIKYLTDGVLLRESLSNPMLDDYSVII 122
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 700
LDEAHER+++TD+L GL+K+LV+ R + ++++TSATLD EK S +F C + +PG+ +
Sbjct: 123 LDEAHERSLNTDILLGLVKRLVRIRASNFKVLITSATLDGEKVSEFFSGCPVLNVPGKLY 182
Query: 701 PVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGK 760
PVEILY+K+ Y+++SL + IH+ EPEGDIL+F+TGQ++I+ L E+++ L +
Sbjct: 183 PVEILYSKERPVSYIESSLKVAIDIHVREPEGDILIFMTGQDDIEKLVSRLEEKVRSLAE 242
Query: 761 -NVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAK 819
+ + II P++ +LP EMQ R+F P PP R+ +V+TNIAE SLT+DG+ YVID G+ K
Sbjct: 243 GSCMDAIIYPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVK 302
Query: 820 QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQ 879
Q YNP G+ SL + IS+ A QRAGRAGRT PGKCYRLY + YR++ +IPEIQ
Sbjct: 303 QRQYNPSSGMFSLDVIQISKVQANQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQ 362
Query: 880 RINLGFTTLTMKAMGINDL--LSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK 937
R +L + L +K++ + D+ L FDF+D PS ++L A++QLY + A+DE G +T++GR
Sbjct: 363 RTSLAGSVLYLKSLDLPDIDILKFDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRT 422
Query: 938 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ-P 996
M++ PL+P LS+ L+ + + GC + LT++AM+ R K ++ +K + P
Sbjct: 423 MSDLPLEPSLSRTLIEANETGCLSQALTVVAMLSAETTLLPARSKPSEKKRKHDEDSNLP 482
Query: 997 EG----DHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVM 1052
G DH+ LL ++E+W N+ WC EN +Q R + +DVR+QL IM K D +
Sbjct: 483 NGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRL 542
Query: 1053 SAGKNFTK 1060
G + K
Sbjct: 543 EVGADGRK 550
Score = 252 (93.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 62/180 (34%), Positives = 97/180 (53%)
Query: 978 RPREKQAQADQ-KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1036
+P EK+ + D+ GDH+ LL ++E+W N+ WC EN +Q R + +DV
Sbjct: 467 KPSEKKRKHDEDSNLPNGSGYGDHIQLLQIFESWDRTNYDPVWCKENGMQVRGMVFVKDV 526
Query: 1037 RKQLLSIMDKY---KLDVMSAGK------NFTKIRKAITAGFFFHAA-RKDPQEGYRTL- 1085
R+QL IM K +L+V + G+ ++ K+RKA+ G A R GYRTL
Sbjct: 527 RRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKALCVGNANQIAERMLRHNGYRTLS 586
Query: 1086 VENQPVYIHPSSALFQ----RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKV 1141
++Q V +HPSS L P++V+YHEL+ TT+ +MR V +D W+ + + K+
Sbjct: 587 FQSQLVQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAVDMAWVAPIKRKIEKL 646
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 1136 (405.0 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
Identities = 242/553 (43%), Positives = 355/553 (64%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRV 579
R+ LPIY K ++I+ +++NQV +VIGETGSGK+TQ+ Q+L IG TQPRRV
Sbjct: 179 REKLPIYHHKDKIIEYINNNQVTIVIGETGSGKSTQIPQFLMPENPKM---IGVTQPRRV 235
Query: 580 AAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSV 639
AA S+A RV+EE+GC+LG++VGY +RF + T T +KY+TDGMLLREI++D NL++YS
Sbjct: 236 AAASLAARVSEEYGCKLGQDVGYQVRFTNMTNRQTKLKYLTDGMLLREIMLDSNLTKYST 295
Query: 640 IMLDEAHERTIHTDVLFGLLKQLVK--RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPG 697
I+LDEAHERTI TD++ G LKQ++ +R DL+++V SATL+AE FS +F N I I G
Sbjct: 296 IILDEAHERTILTDLIMGFLKQIITSGKRKDLKIVVMSATLNAELFSNFFGNAPILYIEG 355
Query: 698 RTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKG 757
+ +PV Y D +D + +++QI+L EPEGD+L FL GQEEID +SL +
Sbjct: 356 KMYPVSQFYLDAESEDIVDTMIRSIIQINLNEPEGDVLCFLPGQEEIDNCVKSLEQLAPQ 415
Query: 758 LGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGF 817
L + P ++ LP+Y+AL QS+IF+ P G+RKV++ATNIAE S+T+ G+ YVID G
Sbjct: 416 LPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGL 475
Query: 818 AKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPE 877
K V+ GL +L+ TPISQASA+QRAGRAGR GK +RLY ES Y + E
Sbjct: 476 RKIKVWKHNLGLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYM-ALPKQQESE 534
Query: 878 IQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK 937
I+R ++ LT+K +G++DLL++ +++ P A++SA+ LY+LGAL++ G +T LG K
Sbjct: 535 IKRNDIILPVLTLKKLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYK 594
Query: 938 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPR-EKQAQADQKRAKFFQP 996
M+ PL P LS +L+ + + G ++ I + + N+ E + + + KR + P
Sbjct: 595 MSILPLPPQLSVVLITAAEFGVLSPVIDIASCLSVDNLITNVTGEARDEINFKRRQHC-P 653
Query: 997 EGD-HLTLLAVYEAWKAKNFSGP-WCFENFVQSRSLRRAQDVRKQLLS-IMDKYKLD--V 1051
G+ H L+A+YE ++A G WC E + + + ++ QL +M K D +
Sbjct: 654 LGNIHGDLIALYEYFQAYQAQGKEWCKELAFSFKGFKNVEKIKYQLQEYMMTTIKQDDSL 713
Query: 1052 MSAGKN--FTKIR 1062
+A KN K+R
Sbjct: 714 TNAEKNKQLAKLR 726
Score = 141 (54.7 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
Identities = 39/114 (34%), Positives = 56/114 (49%)
Query: 1026 QSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFT--KIRKAITAGFFFHAARKDPQEGYR 1083
Q SL A+ KQL + + +LD K I K+ G+ + A P +R
Sbjct: 709 QDDSLTNAEK-NKQLAKL--RAQLDNEETDKQLDVPSILKSFLKGYITNTAVGMPDRSFR 765
Query: 1084 TLVENQPVYIHPSSALFQR-QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
T Q + +HPSS LF + D ++Y E V TTK Y R V+ I+ WL ++AP
Sbjct: 766 TFNTGQLISVHPSSTLFGKPNMDAIMYIEYVFTTKGYARNVSAIELSWLQEIAP 819
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 1236 (440.2 bits), Expect = 7.8e-126, P = 7.8e-126
Identities = 264/643 (41%), Positives = 393/643 (61%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG 572
+ SI++Q++SLP++ + +++ + N ++++ ETGSGKTTQ+ Q+L AGY G IG
Sbjct: 58 RTSIEQQQKSLPVFNCRHRILKELEANDTVLIMSETGSGKTTQIPQFLLLAGYAKNGMIG 117
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
TQPRRVAA++VA+RVA+E +G+ VGY +RFED T T I+++TDG+LLRE + D
Sbjct: 118 ITQPRRVAAITVARRVAQELNGTIGDTVGYTVRFEDVTSRATKIRFLTDGVLLRESIKDR 177
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR-----PDLRLIVTSATLDAEKFSGYF 687
L +YSVI+LDEAHERT++ D+LFG++K K R +L+++VTSAT+D + F YF
Sbjct: 178 LLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGNYF 237
Query: 688 FNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEG-DILLFLTGQEEIDF 746
NC + GRT+PV +++TK+ DY+ L+T+ IH T P+ D+L+FLTGQEEI+
Sbjct: 238 -NCKGMYLEGRTYPVRVMHTKEEHEDYIHTVLVTLFHIHRTTPKNHDVLIFLTGQEEIES 296
Query: 747 ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTI 806
Q + + K +L + +Y+ L Q F P P RKV++ATNIAE S+TI
Sbjct: 297 LAQQIRQLAKIDTTGTTDLRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITI 356
Query: 807 DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 866
GI VID GF K+ +N GLD L IS+A A QRAGRAGR G CYR YT+ A
Sbjct: 357 PGIRCVIDCGFVKEKSFNTVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTK-AE 415
Query: 867 RNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 926
+ + + PEI R N L + A+ I D +FDF+DPP L SA + L +LGA+
Sbjct: 416 MDSFADATQPEILRTNPTSMVLQLLALDI-DCNNFDFLDPPLEDGLRSAYKSLDALGAIK 474
Query: 927 --EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA 984
++ +T LGR+M ++PLDP SK+LL + GC +EIL++++++ + ++F EK
Sbjct: 475 TGDDSYITPLGRQMVQYPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFVSNSEKNE 534
Query: 985 QADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
A AKF GDHLTLL V+ + WC +N++ RSL A++VR+QL I
Sbjct: 535 MAALAHAKFQSKHGDHLTLLNVFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREIS 594
Query: 1045 DKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQR-Q 1103
+ L +++ + ++K I GFF + A Y T N IHPSS L + +
Sbjct: 595 EHLHL-ALNSSDDIEMLKKCILNGFFENIAVLQRDGFYITASGNIRSKIHPSSVLHGKYK 653
Query: 1104 PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTK 1146
P ++++ E+V T + ++R+VT I +W+ ++ P F K PT+
Sbjct: 654 PSYILFTEIVQTEQTFLRQVTEISIEWIKEVVP-FVKNI-PTR 694
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 245/550 (44%), Positives = 346/550 (62%)
Query: 600 VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLL 659
VGY +RF+D T DT IK++TDGMLLRE + D L +YS ++LDEAHERTIHTDVLFG++
Sbjct: 61 VGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVV 120
Query: 660 KQLVKRRPDL-----RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDY 714
K KRR +L ++IV SAT+D + FS YF + + GR P+++ YTKQP++DY
Sbjct: 121 KAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLEGRQHPIQVFYTKQPQNDY 180
Query: 715 LDASLITVLQIHLTEPEG-DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSA 773
L A+L++V QIH P DIL+FLTGQEEI+ ++ + K L P +++LP+Y++
Sbjct: 181 LHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLPLYAS 240
Query: 774 LPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLV 833
LP Q R+F AP G RKV+++TNIAE S+TI GI YV+D G K YNP GL+ L
Sbjct: 241 LPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLA 300
Query: 834 ITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAM 893
+ +S+ A QR GRAGR G CYRLYTE + + ++PEIQR NL L + AM
Sbjct: 301 VQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KFDKMTVPEIQRCNLASVMLQLLAM 359
Query: 894 GINDLLSFDFMDPPSPQALISAMEQLYSLGAL---DEEGLLTKLGRKMAEFPLDPPLSKM 950
+ ++L+FDFM PSP + +A+ QL LGAL D++ LT +GRKMA FPL+P +K
Sbjct: 360 KVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAAFPLEPKFAKT 419
Query: 951 LLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW 1010
+L S C++EILTI++++ ++ + P ++ + R KF EGDH+TLL +Y +
Sbjct: 420 ILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDHMTLLNIYRTF 479
Query: 1011 KAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFF 1070
K + WC ENFV S+++ +VR QL I K + + S+ + +R+ + F
Sbjct: 480 KNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVRRCLAHSLF 539
Query: 1071 FHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKW 1130
A P Y T +QPV IHPSS LF +P V+Y EL+ T K YMR++ VID +W
Sbjct: 540 MSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYMRDLCVIDAQW 599
Query: 1131 LVDLAPRFFK 1140
L + AP +F+
Sbjct: 600 LYEAAPEYFR 609
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 1086 (387.4 bits), Expect = 5.7e-124, Sum P(2) = 5.7e-124
Identities = 236/554 (42%), Positives = 353/554 (63%)
Query: 506 LTFGQ-RSKLS-IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA 563
LT+ +S+ S + + R++LP+Y+ K+E++ + N V V+IGETGSGK+TQ+ Q++ E
Sbjct: 62 LTYKSLKSRASDLLKMRETLPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEK 121
Query: 564 GYTTR--GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
Y T+ G I TQPRRVAA+++A RVA+E GC+LGE+VGY++RF++ T T +KY+TD
Sbjct: 122 LYDTKKHGSIAVTQPRRVAAINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTD 181
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKR-RPDLRLIVTSATLDA 680
GMLLRE++++ +L +YSVI++DEAHERT+ TD++ G LK L++ RPDLR+IV SATL A
Sbjct: 182 GMLLRELMMNSDLREYSVIVIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQA 241
Query: 681 EKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTG 740
EKFS +F N I + GR F V+ Y K P D +DA + +QI+ E GDIL FL G
Sbjct: 242 EKFSEFFNNAPILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPG 301
Query: 741 QEEIDFACQSLYERMKGLGKNVPELIILP--VYSALPSEMQSRIFDPAPPGKRKVVVATN 798
QEEID A + + K + P +I+P +Y+ALP+ QS +F P KRKVV +TN
Sbjct: 302 QEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTN 361
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
IAE S+TI G+ +V+D G K V+ + GL +L+ PISQASA QR+GRAGR GK +
Sbjct: 362 IAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSF 421
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLY ES Y ++ S PEI R ++ L +K G++DLL++ + + P +A++ +++
Sbjct: 422 RLYCESDYV-KLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQE 480
Query: 919 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR 978
LY LGALD G +TK G++MA PL P LS +L+ + ++GC +++ I++ + N+
Sbjct: 481 LYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLN 540
Query: 979 PR-EKQAQADQKRAKFFQPE---GDHLTL-----LAVYEAWKAKNFSGP---WCFENFVQ 1026
P E++ + +++R GD + L + YE K+++ S WC +
Sbjct: 541 PSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCIS 600
Query: 1027 SRSLRRAQDVRKQL 1040
R + VR QL
Sbjct: 601 IRGFKNVIRVRDQL 614
Score = 153 (58.9 bits), Expect = 5.7e-124, Sum P(2) = 5.7e-124
Identities = 49/159 (30%), Positives = 71/159 (44%)
Query: 1007 YEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQL----------LSIMDKYKLDVMS 1053
YE K+++ S WC + R + VR QL +S D+ +
Sbjct: 578 YELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRVYCKRLFSSISEEDEESKKIGE 637
Query: 1054 AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP-DWVIYHEL 1112
G+ +KI K GF + A P YRT+ +P+ IHPSS LF + ++Y E
Sbjct: 638 DGELISKILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEY 697
Query: 1113 VMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRK 1151
V TTK Y R V+ I+ WL ++ VA K+S K
Sbjct: 698 VFTTKGYARNVSRIELSWLQEVVTNAAAVAKQ-KVSDSK 735
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 702 (252.2 bits), Expect = 1.2e-118, Sum P(2) = 1.2e-118
Identities = 152/391 (38%), Positives = 232/391 (59%)
Query: 779 QSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIS 838
Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD L + PIS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 839 QASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDL 898
++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K + I+D+
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 899 LSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLG 958
+ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ ++ + L
Sbjct: 399 IRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLD 458
Query: 959 CSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAVYEAWKAK 1013
C D +L I AM+ N+F RP E Q +A+Q+ + G D TL ++E K+
Sbjct: 459 CEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSS 518
Query: 1014 NFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL--DVMSA---GKNFTKIRKAITAG 1068
WC ++++ R L A V QL ++ K K D G +R+ + AG
Sbjct: 519 GAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLCAG 578
Query: 1069 FFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKEYMREVTV 1125
+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK Y R V
Sbjct: 579 YFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCP 638
Query: 1126 IDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
I +W+ DL P+ F D + +++R+ +E
Sbjct: 639 IRYEWVRDLLPKLHEFNAHDLSSVARREVRE 669
Score = 494 (179.0 bits), Expect = 1.2e-118, Sum P(2) = 1.2e-118
Identities = 101/194 (52%), Positives = 139/194 (71%)
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
IG TQPR+VAA+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL
Sbjct: 2 IGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG 61
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSG 685
D NL+++SVI+LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S
Sbjct: 62 DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSA 121
Query: 686 YFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLT 739
+F NC IF IPGR +PV ++ + E+ Y+ A + + IHL E GDIL+FLT
Sbjct: 122 FFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLT 181
Query: 740 GQEEIDFACQSLYE 753
GQ EI+ +C+ L++
Sbjct: 182 GQFEIEKSCELLFQ 195
Score = 194 (73.4 bits), Expect = 5.5e-87, Sum P(2) = 5.5e-87
Identities = 52/158 (32%), Positives = 85/158 (53%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 101 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 160
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 161 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 220
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
++ + Q+ + K + + LTI GI
Sbjct: 221 GSMTTVSQTSLTFVTHIQIMKQISENQHSLTGLTIAGI 258
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 1162 (414.1 bits), Expect = 5.4e-118, P = 5.4e-118
Identities = 244/621 (39%), Positives = 384/621 (61%)
Query: 519 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR-GKIGCTQPR 577
Q++ LPI K + +L+ AV NQ+ +V+G TG GKTTQ+ Q+L EAG+ ++ G IGCTQPR
Sbjct: 21 QKKLLPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPR 80
Query: 578 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 637
R+ A SV++RV+ E G GY+I+F+ T IKYMTDG+LL EI D L +Y
Sbjct: 81 RLVAKSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERY 140
Query: 638 SVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT--I 695
S+++LDE HERT+ TD+L G+LK+++++R D RL+++SA++DA K S +F + T I
Sbjct: 141 SIVILDEVHERTLSTDLLLGVLKRILEKRNDFRLVLSSASVDANKLSQFFGQDKVCTMSI 200
Query: 696 PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 755
G+ FPVE L+ ++P +Y+D+++ TV+ I+ T P GDIL+FL+G++EI++ + + + +
Sbjct: 201 EGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSL 260
Query: 756 KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 815
++ L+ LP+++ L + Q R+F+ RKV+ +TNIAE S+TIDGI YV+D
Sbjct: 261 IHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDS 320
Query: 816 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI 875
GF KQ +YNP L+ PIS++SA QR+GRAGRT GK +RLYTE AY + M
Sbjct: 321 GFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-SLMKEEFE 379
Query: 876 PEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK-L 934
+I ++ L +K +G+ ++L F F P L++A+E LY LG LDE G LT L
Sbjct: 380 ADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPL 439
Query: 935 GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ-ADQKRAKF 993
G +++ LD +SK LL S GC+ EIL+I +++ G +FY P A + F
Sbjct: 440 GIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSF 499
Query: 994 FQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS 1053
F EGD +T L V+E++ WC +N++ ++LR+A D+R L+ ++K+ +
Sbjct: 500 FANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNKFSIPTAQ 559
Query: 1054 A--GKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHE 1111
+ +KI K + GF + A Y+T+ Q V++ SS L +++ W++Y
Sbjct: 560 RLPSSDCSKILKCLLDGFVRNVAHLQNDGSYKTIGGKQ-VWLDSSSVLHEKKTPWIMYSS 618
Query: 1112 LVMT-TKEYMREVTVIDPKWL 1131
V + T+ +++ ++ I+ WL
Sbjct: 619 AVESETQIFVKNISKIESFWL 639
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 1159 (413.0 bits), Expect = 1.1e-117, P = 1.1e-117
Identities = 257/630 (40%), Positives = 378/630 (60%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPR 577
E + LP+ + + E+ +A+ NQV++V GETGSGKTTQ+ + EAG +G IG TQPR
Sbjct: 69 EYPEELPVSERRGEIAEAIRQNQVVIVCGETGSGKTTQLPKICLEAGRGIQGYIGHTQPR 128
Query: 578 RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQY 637
R+AA SVA R+A+E LGE VGY +RF D T PD++IK MTDG+LL E D L QY
Sbjct: 129 RIAARSVAARIADELKRPLGETVGYKVRFHDQTRPDSLIKLMTDGILLAETQTDRFLDQY 188
Query: 638 SVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPG 697
+++DEAHER+++ D L G LK L+ RR DL+L++TSAT+D E+FS +F N I +PG
Sbjct: 189 DTLIVDEAHERSLNIDFLLGYLKWLLPRRHDLKLVITSATIDPERFSRHFDNAPIVRVPG 248
Query: 698 RTFPVEILY----TKQPESDYLD-----ASLITVLQIHLTEPEGDILLFLTGQEEIDFAC 748
RT+PVEI Y + + ESD + A L V ++H E GDIL+FL+G+ EI
Sbjct: 249 RTYPVEIRYRPPDSAEEESDETERGEQQAILDAVDELH-RENTGDILIFLSGEREIRDTA 307
Query: 749 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDG 808
+SL + + + +LP+YS L Q +IF P G+R++V+ATN+AE SLT+ G
Sbjct: 308 ESLRKH------HPADCEVLPLYSRLTVSEQEKIFKPH--GRRRIVLATNVAETSLTVPG 359
Query: 809 IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 868
I VID G+A+ + Y+ + L L I IS+ASA QRAGR GR GPG C RLY+E + N
Sbjct: 360 IRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDFLN 419
Query: 869 EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE 928
T PEI R NL L MKA+ + D+ F F++PP + + + L + ALD +
Sbjct: 420 RPEFTD-PEILRTNLAAVILQMKALNLGDIRVFPFVEPPDERLVRDGLRTLQEINALDAQ 478
Query: 929 GLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 988
G LT+LGR++A P+DP L ++LLA + C E+ I+A + + RP +K ADQ
Sbjct: 479 GRLTELGRRLARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAADQ 538
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAK--NFSGP----WCFENFVQSRSLRRAQDVRKQLLS 1042
K A+F P+ D + +LA++ ++ + + SG +C +NF+ + +R +D+ +Q+L
Sbjct: 539 KHARFRHPDSDFMAILALWNDYEEQRQHLSGSKLRQYCRDNFLSALRMREWRDIHQQILE 598
Query: 1043 IMD-KYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQ 1101
++ + L ++ +I +A+ G H + Q Y V Q I P S LF+
Sbjct: 599 VVKGELGLRPNQVPADYGEIHRALLTGLLCHVGFRQDQNEY-VGVRGQKFQIFPGSFLFK 657
Query: 1102 RQPDWVIYHELVMTTKEYMREVTVIDPKWL 1131
+P W+I E V T++ Y R V I+P+W+
Sbjct: 658 TRPVWIISAEQVETSRVYARTVARIEPEWI 687
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 1016 (362.7 bits), Expect = 2.8e-117, Sum P(2) = 2.8e-117
Identities = 218/536 (40%), Positives = 331/536 (61%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 582
LPIY ++++++ +H Q++V+IGETGSGK+TQ+ Q+LA++G I CTQPR++AAM
Sbjct: 306 LPIYAYRRQILKKIHREQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 365
Query: 583 SVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
++A RV EE GC V F + + YMTD LL+ + D +LS S ++
Sbjct: 366 TLADRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 425
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
+DEAHER+++TD+L LLK+L+ RR DLRL++ SAT DA++ S YFF+C I + GR FP
Sbjct: 426 IDEAHERSLNTDLLLALLKKLLSRRIDLRLVIMSATADAKQLSQYFFSCGILLVNGRNFP 485
Query: 702 VEILYTKQPESD---------YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
VEI+Y+ + Y+ + ++IH TE EG IL FLT Q E+++AC+
Sbjct: 486 VEIVYSPSDTEENSVVGGIASYVGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERFI 545
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
P I LP++ L E Q R+F P G+RKV+ ATNIAE SLTI G+ YV
Sbjct: 546 ---------TPSAIALPLHGKLSFEEQFRVFQNHP-GRRKVIFATNIAETSLTIPGVKYV 595
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G K++ Y P+ G+ L + +SQ+SA+QRAGRAGRT PG+CYRLY+++ + + M+
Sbjct: 596 IDSGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDF-DSMNL 654
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE-GL- 930
PEI+R++LG L M A+G+N++ F+F+D P P+A+ A++ L LGA+ E+ G+
Sbjct: 655 NQEPEIRRVHLGVALLRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 931 -LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA-MIQTGNIFYRPR--EKQAQA 986
LT+ G + + L+P L K++L E + + A M +IF R + + +A
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 774
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQL 1040
D+ + +F GD TLL+VY+ W + + WC+EN + ++S+RR +D K+L
Sbjct: 775 DRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKEL 830
Score = 180 (68.4 bits), Expect = 2.8e-117, Sum P(2) = 2.8e-117
Identities = 52/189 (27%), Positives = 97/189 (51%)
Query: 981 EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFVQSRSLRRAQDVRK 1038
+ + +AD+ + +F GD TLL+VY+ W + + WC+EN + ++S+RR +D K
Sbjct: 769 DDKMKADRLKVQFCNQNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVK 828
Query: 1039 QLLSIMDKYKLDVMSAG----------KNFTKIRKAITAGFFFHAARKDP--QEGYRTLV 1086
+L +++ +L ++S K+ ++ I A + A Q GY +
Sbjct: 829 ELEICIER-ELTLVSPSYWVWNPNEGTKHDKHLKMVILASLAENVAMYTGYNQLGYEVAL 887
Query: 1087 ENQPVYIHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPK--WLVDLAPRFFKVA 1142
Q V +HPS +L F ++P WV++ EL+ +Y+ VT D + +++D P F
Sbjct: 888 TGQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTACDFEALYMLDPPPPF---- 943
Query: 1143 DPTKMSKRK 1151
D ++M +R+
Sbjct: 944 DVSQMDERR 952
Score = 42 (19.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 707 TKQPESDYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDF--ACQSLYE-RMKGLGKNV 762
TK+ E + L A L + + + P+ G I + ++ +D A +L++ R++G + V
Sbjct: 104 TKKQEIESL-ALLCEIPEESIHVPQFGCIAGSFSFRQWVDARSAVVALWDYRLQGKHEFV 162
Query: 763 PELIILPVYSALPSEMQSRIFD 784
PELI + + +E++ R+ D
Sbjct: 163 PELIPNVIVPSDMNELKDRLRD 184
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 993 (354.6 bits), Expect = 2.7e-115, Sum P(2) = 2.7e-115
Identities = 217/536 (40%), Positives = 331/536 (61%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 582
LPIY ++++++ +H Q++V+IGETGSGK+TQ+ Q+LA++G I CTQPR++AAM
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 583 SVAKRVAEEF-GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
++ RV EE GC V F + + YMTD LL+ + D +LS S ++
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
+DEAHER+++TD+L LL++L+ RR DLRL++ SAT DA + S Y F+C I + GR FP
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRIDLRLVIMSATADANQLSQYLFDCGILHVNGRNFP 482
Query: 702 VEILY----TKQPE-----SDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
VEI+Y T++ + Y + ++IH TE EG IL FLT Q E+++AC
Sbjct: 483 VEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWAC---- 538
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
ER P I LP++ L E Q +F P G+RKV+ ATNIAE SLTI G+ YV
Sbjct: 539 ERFVA-----PSAIALPLHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYV 592
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
ID G K++ Y P+ G+ L + +SQ+SA+QRAGRAGRT PG+CYRLY+++ + + M+
Sbjct: 593 IDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDF-DSMNL 651
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE-GLL 931
PEI+R++LG L M A+GI+++ +F+F+D P P+A+ A++ L LGA+ E+ G+L
Sbjct: 652 NQEPEIRRVHLGVALLRMLALGIDNIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVL 711
Query: 932 --TKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA-MIQTGNIFYRPR--EKQAQA 986
T+ G + + L+P L K++L E + + A M +IF R + + +A
Sbjct: 712 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGNFDDKMKA 771
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQL 1040
D+ + +F GD TLL+VY+ W + ++ WC+EN + ++S+RR +D K+L
Sbjct: 772 DRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKEL 827
Score = 185 (70.2 bits), Expect = 2.7e-115, Sum P(2) = 2.7e-115
Identities = 53/189 (28%), Positives = 99/189 (52%)
Query: 981 EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA--KNFSGPWCFENFVQSRSLRRAQDVRK 1038
+ + +AD+ + +F GD TLL+VY+ W + ++ WC+EN + ++S+RR +D K
Sbjct: 766 DDKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVK 825
Query: 1039 QLLSIMDKYKLDVMSA---------GKNFTK-IRKAITAGFFFHAARKD--PQEGYRTLV 1086
+L +++ +L ++S G K ++ I A + A Q GY +
Sbjct: 826 ELEICIER-ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEVAL 884
Query: 1087 ENQPVYIHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPK--WLVDLAPRFFKVA 1142
+Q V +HPS +L F ++P WV++ EL+ +Y+ VT D + +++D P F
Sbjct: 885 TSQQVQLHPSCSLLAFGQKPSWVVFGELLSIVDQYLVCVTAFDFEALYMLDPPPPF---- 940
Query: 1143 DPTKMSKRK 1151
D ++M +R+
Sbjct: 941 DASQMDERR 949
Score = 38 (18.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 747 ACQSLYE-RMKGLGKNVPELIILPVYSALPSEMQSRIFD 784
A +L++ R++G VPELI V + E++ R+ D
Sbjct: 143 AVVALWDYRLQGRHDFVPELIPNVVVPSDMDELKDRLRD 181
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 846 (302.9 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 184/455 (40%), Positives = 276/455 (60%)
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEIDFACQSLY- 752
I GR FPV+ +Y+ +P D++DA+L + QIH EP GDIL+FLTGQE ++ A ++L
Sbjct: 365 IKGRQFPVKTIYSPEPVHDFVDAALKVIFQIHYKEPIPGDILVFLTGQETVE-ALENLVN 423
Query: 753 ERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYV 812
E G+ ++P++ +LP+++ALP Q R+F PAPP RK+++ATNIAE S+T+ G+ YV
Sbjct: 424 EYATGMDPSLPKIQVLPLFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYV 483
Query: 813 IDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSP 872
+D G AK + + GLDSL++ PIS+++A QR GRAGR PG+CYRLYTE Y +
Sbjct: 484 VDCGKAKIKQFRTRLGLDSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYL-ALDE 542
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLT 932
+ PEI R +L L MKA G+++++ F F+ P +AL A+ QL S+ ALDE G ++
Sbjct: 543 VNTPEILRCDLSQAILNMKARGVDNVIEFPFLTRPPREALEKALLQLLSIEALDETGKIS 602
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLG--CSDEILTIIAMIQTGNIFYRP--REKQAQADQ 988
+ G +A+ PL P L ++LLA+ D G C +++ II+ + NIF EK+ A+
Sbjct: 603 ETGSHIAKLPLTPTLGRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKKEAAEA 662
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-WCFENFVQSRSLRRAQDVRKQLLSIMDKY 1047
R ++ EGDHLT+LA A+ ++N W + V R+++ DVRKQL + +
Sbjct: 663 ARRDLYRREGDHLTMLATVRAYASENTDRKAWAERHLVSHRAMQSVMDVRKQLTAQCRQA 722
Query: 1048 KL---DVMSAGKNFTKIR--------KAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1096
KL S + + IR K+ GF + AR P YRT+V NQ V IHPS
Sbjct: 723 KLLPSPTESRDSDSSSIREPSPVFILKSFLRGFATNTARLVPDGSYRTVVGNQTVAIHPS 782
Query: 1097 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWL 1131
S LF ++ + ++Y+E V T + Y R V+ + W+
Sbjct: 783 SVLFGKKVEAILYNEFVFTNRSYARGVSAVQMDWV 817
Score = 275 (101.9 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 62/147 (42%), Positives = 92/147 (62%)
Query: 552 KTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGE-----EVGYAIRF 606
KTT V + ++ G I TQPRRVAA+S+A+RVAEE G LG +VGY++RF
Sbjct: 194 KTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMGTPLGSSSPASKVGYSVRF 253
Query: 607 EDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR 666
+ P T +K++T+GMLL+E+L D L++YS I++DE HER ++ D++ G L+ LV +
Sbjct: 254 DTSVSPSTRVKFLTEGMLLQEMLHDPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGK 313
Query: 667 PD------LRLIVTSATLDAEKFSGYF 687
+ L+ +V SAT D E +F
Sbjct: 314 REGRGGVPLKAVVMSATADMESLQEFF 340
Score = 119 (46.9 bits), Expect = 1.0e-97, Sum P(3) = 1.0e-97
Identities = 34/115 (29%), Positives = 64/115 (55%)
Query: 497 WKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQV 556
+K + G+ + +++++ + E R++LPI+ E+ Q + N V+++IGETGSGK+TQ+
Sbjct: 122 FKDEENGRTASLKKKAQM-LYEIRKNLPIFAHGDEIRQHLRKNDVMLLIGETGSGKSTQI 180
Query: 557 TQYLAEAGYTTRGKIGCTQP---RRVA------AMSVAKRVAE-EFGCRLGEEVG 601
Q+L + + K Q ++ A A++ +RVA R+ EE+G
Sbjct: 181 PQFLVDESWCRPTKTTIVQENGSKKEAVVGGCIAITQPRRVAAISLARRVAEEMG 235
Score = 39 (18.8 bits), Expect = 4.0e-114, Sum P(3) = 4.0e-114
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 471 PMPETGER 478
P PETGER
Sbjct: 30 PSPETGER 37
>UNIPROTKB|Q8EEY1 [details] [associations]
symbol:hrpA "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 243/633 (38%), Positives = 372/633 (58%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+LP+ +++++ +A+ NQV+++ GETGSGKTTQ+ + E G +RG IG TQPRR+AA
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
SVA RVAEE LGE VG+ +RF D ++ IK MTDG+LL E+ D L QY I+
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
+DEAHER+++ D + G LKQ++K+RPDL++I+TSAT+D E+FS +F N I + GRT+P
Sbjct: 195 IDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYP 254
Query: 702 VEILY---TKQPESDYLDA--SLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 756
VE Y + E+D LD + + + E GDIL+F+ G+ EI + L R
Sbjct: 255 VETRYRPLVQDTEAD-LDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRR-- 311
Query: 757 GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 816
N + ILP+Y+ L QS++F + G+R +V+ATN+AE SLT+ GI YVIDPG
Sbjct: 312 ----NYRDTEILPLYARLSYGEQSKVFS-SHTGRR-IVLATNVAETSLTVPGIRYVIDPG 365
Query: 817 FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIP 876
A+ + Y+ + + L I PISQASA QR GR GR GPG C RLY E+ + N + T P
Sbjct: 366 TARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD-P 424
Query: 877 EIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE-G--LLTK 933
EI R NL L M A+G+ D+ +F F++PP P+ + L L A+ ++ G +LT
Sbjct: 425 EILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTP 484
Query: 934 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKF 993
LGR++++ P+DP L++M++ S LGC +E+L I + + + RP +K+ +D+ +F
Sbjct: 485 LGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASDEAHRRF 544
Query: 994 FQPEGDHLTLLAVYEAWKA--KNFSGPW----CFENFVQSRSLRRAQDVRKQLLSIMDKY 1047
P+ D ++ + +++ K K S C + ++ +R QD+ QL +
Sbjct: 545 ADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDL 604
Query: 1048 KLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1107
K + N+ + +A+ +G H KD Y N+ ++ P S L ++ P W+
Sbjct: 605 KWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLG-ARNRKFFVFPGSPLAKKGPKWI 663
Query: 1108 IYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
+ EL+ T+K + R I+P+WL LA K
Sbjct: 664 MAAELMETSKLFARCCAKIEPEWLEPLAAHLIK 696
>TIGR_CMR|SO_2229 [details] [associations]
symbol:SO_2229 "ATP-dependent helicase HrpA" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:NP_717826.1 ProteinModelPortal:Q8EEY1 GeneID:1169965
KEGG:son:SO_2229 PATRIC:23524089 ProtClustDB:CLSK906644
Uniprot:Q8EEY1
Length = 1293
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 243/633 (38%), Positives = 372/633 (58%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+LP+ +++++ +A+ NQV+++ GETGSGKTTQ+ + E G +RG IG TQPRR+AA
Sbjct: 75 NLPVSGMREDIAKAISANQVVIIAGETGSGKTTQLPKICLELGLGSRGFIGHTQPRRLAA 134
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
SVA RVAEE LGE VG+ +RF D ++ IK MTDG+LL E+ D L QY I+
Sbjct: 135 RSVASRVAEELQSPLGEVVGFKVRFADALKSESYIKLMTDGILLAELTSDRYLDQYDTII 194
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
+DEAHER+++ D + G LKQ++K+RPDL++I+TSAT+D E+FS +F N I + GRT+P
Sbjct: 195 IDEAHERSLNIDFILGYLKQILKKRPDLKIIITSATIDVERFSKHFNNAPIIEVSGRTYP 254
Query: 702 VEILY---TKQPESDYLDA--SLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 756
VE Y + E+D LD + + + E GDIL+F+ G+ EI + L R
Sbjct: 255 VETRYRPLVQDTEAD-LDQIEGIFAAVDELVAEGLGDILIFMNGEREIRDTAEQLNRR-- 311
Query: 757 GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 816
N + ILP+Y+ L QS++F + G+R +V+ATN+AE SLT+ GI YVIDPG
Sbjct: 312 ----NYRDTEILPLYARLSYGEQSKVFS-SHTGRR-IVLATNVAETSLTVPGIRYVIDPG 365
Query: 817 FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIP 876
A+ + Y+ + + L I PISQASA QR GR GR GPG C RLY E+ + N + T P
Sbjct: 366 TARISRYSYRTKVQRLPIEPISQASANQRQGRCGRVGPGICIRLYDEADFNNRPAFTD-P 424
Query: 877 EIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE-G--LLTK 933
EI R NL L M A+G+ D+ +F F++PP P+ + L L A+ ++ G +LT
Sbjct: 425 EILRTNLASVILQMLAIGLGDIAAFPFIEPPDPRHIRDGFLLLEELQAVKQQKGNIVLTP 484
Query: 934 LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKF 993
LGR++++ P+DP L++M++ S LGC +E+L I + + + RP +K+ +D+ +F
Sbjct: 485 LGRQLSQIPVDPRLARMVIESHQLGCLNEVLVIASGLSIQDPRERPMDKKQASDEAHRRF 544
Query: 994 FQPEGDHLTLLAVYEAWKA--KNFSGPW----CFENFVQSRSLRRAQDVRKQLLSIMDKY 1047
P+ D ++ + +++ K K S C + ++ +R QD+ QL +
Sbjct: 545 ADPQSDFVSWVNLWQHLKEQQKELSASQFRKKCRDEYLAYLRVREWQDLYTQLKQAVHDL 604
Query: 1048 KLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1107
K + N+ + +A+ +G H KD Y N+ ++ P S L ++ P W+
Sbjct: 605 KWRLNDTPANYDALHRALLSGLLSHIGFKDNNNEYLG-ARNRKFFVFPGSPLAKKGPKWI 663
Query: 1108 IYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
+ EL+ T+K + R I+P+WL LA K
Sbjct: 664 MAAELMETSKLFARCCAKIEPEWLEPLAAHLIK 696
>WB|WBGene00020263 [details] [associations]
symbol:T05E8.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0007413
"axonal fasciculation" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0006898 GO:GO:0040010
GO:GO:0040011 GO:GO:0003676 GO:GO:0040035 GO:GO:0007413
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO080463 PIR:T29623
RefSeq:NP_491604.3 ProteinModelPortal:O01598 SMR:O01598
STRING:O01598 PaxDb:O01598 EnsemblMetazoa:T05E8.3 GeneID:172199
KEGG:cel:CELE_T05E8.3 UCSC:T05E8.3 CTD:172199 WormBase:T05E8.3
InParanoid:O01598 OMA:KEGCIME NextBio:874451 Uniprot:O01598
Length = 856
Score = 913 (326.5 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 203/490 (41%), Positives = 292/490 (59%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRV 579
R LPI ++++L+ + + L+VIGETGSGK+TQV Q AG G I TQPRRV
Sbjct: 158 RPQLPIDAVEQQLMYELASQETLIVIGETGSGKSTQVPQLCVRAGIANSGSIAVTQPRRV 217
Query: 580 AAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSV 639
AA+S+A RVA E G +G VGY +RFE+ T T I+YMTDG++LR+ L+ L +YS
Sbjct: 218 AAISLASRVATEMGTNIGGIVGYHVRFENATCHKTKIEYMTDGIVLRKALVSPLLDKYSC 277
Query: 640 IMLDEAHERTIHTDVLFGLLKQLVKRRPD----LRLIVTSATLDAEKFSGYFFNCNIFTI 695
+++DEAHER++H+DVL +L+Q +R + LRLI+ SATL AEKF YF N + +
Sbjct: 278 VIIDEAHERSLHSDVLMCILRQCQDQRRETNNPLRLIIMSATLQAEKFQSYFNNAKVVLV 337
Query: 696 PGRTFPVEILYTKQP------ESDYLDASLITVLQIHLTEPEG-DILLFLTGQEEIDFAC 748
GRTFP+E+ + +DY+ ++I V +HLTEP+G DIL+FLTG EEI+
Sbjct: 338 AGRTFPIEVFHVNPKINKSFSSTDYVYNAVICVKYVHLTEPKGRDILVFLTGSEEIEAVA 397
Query: 749 QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDG 808
L E L + L+ +P+Y+AL E Q F P G RKV+++TNIAE S+TI G
Sbjct: 398 SQLAELNGSLPASADVLMPVPLYAALRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPG 457
Query: 809 IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 868
I VID G K + +D L + +S+A AKQRAGRAGR PGKCYRLY+ + +
Sbjct: 458 IRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQAKQRAGRAGRDAPGKCYRLYSREDF-H 516
Query: 869 EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL--- 925
+ ++PEI R NL T L + +G+ + +DPP + +A+ +L SLGA+
Sbjct: 517 KFEAENMPEILRCNLSATFLELMKLGMKNPHRLKLIDPPETDNINAALLELTSLGAIRPV 576
Query: 926 --DEEGL-LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREK 982
D LT++G +PL P +++L + GC E + I+A +QT +F +
Sbjct: 577 NSDRSKFALTEMGDAFCMYPLPPDHARILFQAQKEGCIMEAIKIVAAMQTDALFSGAGDS 636
Query: 983 QAQADQKRAK 992
++ AD R +
Sbjct: 637 KSDADVDRIR 646
Score = 597 (215.2 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 139/351 (39%), Positives = 200/351 (56%)
Query: 669 LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQP------ESDYLDASLITV 722
LRLI+ SATL AEKF YF N + + GRTFP+E+ + +DY+ ++I V
Sbjct: 311 LRLIIMSATLQAEKFQSYFNNAKVVLVAGRTFPIEVFHVNPKINKSFSSTDYVYNAVICV 370
Query: 723 LQIHLTEPEG-DILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 781
+HLTEP+G DIL+FLTG EEI+ L E L + L+ +P+Y+AL E Q
Sbjct: 371 KYVHLTEPKGRDILVFLTGSEEIEAVASQLAELNGSLPASADVLMPVPLYAALRPEKQKE 430
Query: 782 IFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 841
F P G RKV+++TNIAE S+TI GI VID G K + +D L + +S+A
Sbjct: 431 AFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKRFEAFNRIDVLKVHNVSKAQ 490
Query: 842 AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF 901
AKQRAGRAGR PGKCYRLY+ + ++ ++PEI R NL T L + +G+ +
Sbjct: 491 AKQRAGRAGRDAPGKCYRLYSREDF-HKFEAENMPEILRCNLSATFLELMKLGMKNPHRL 549
Query: 902 DFMDPPSPQALISAMEQLYSLGAL-----DEEGL-LTKLGRKMAEFPLDPPLSKMLLASV 955
+DPP + +A+ +L SLGA+ D LT++G +PL P +++L +
Sbjct: 550 KLIDPPETDNINAALLELTSLGAIRPVNSDRSKFALTEMGDAFCMYPLPPDHARILFQAQ 609
Query: 956 DLGCSDEILTIIAMIQTGNIFYRPREKQAQAD--QKRAKFFQPEGDHLTLL 1004
GC E + I+A +QT +F + ++ AD + R +F EGDH+TLL
Sbjct: 610 KEGCIMEAIKIVAAMQTDALFSGAGDSKSDADVDRIRRRFETREGDHITLL 660
Score = 180 (68.4 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 53/200 (26%), Positives = 101/200 (50%)
Query: 964 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1023
+T++ ++ N F+ K+ ++D + K + +L Y K +C +N
Sbjct: 657 ITLLKLVLVTNQFFDQLNKKTESDARYGKA------NKSLEREYNQTIRK-----FCNDN 705
Query: 1024 FVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEG-Y 1082
+ + L+ A + +QL I + K+ + G +F K+RKA+ G F ++ D QE Y
Sbjct: 706 MINEQHLKTASMIEEQLKQIAIEQKVTFSTCGADFMKMRKALALGMFLNSCEYDRQEDRY 765
Query: 1083 RTLVENQ-PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKV 1141
R ++ + IHPSS L + +P ++++ EL+ T + +VT+ID W+ L K+
Sbjct: 766 RLMINPAITLKIHPSSCLSRSKPAYIVFSELMKTNDLFALQVTLIDGDWVRPLISDHKKM 825
Query: 1142 -ADP-TKMSKRKRQ-ERIEP 1158
A+ + ++R +Q R+EP
Sbjct: 826 RANHLAETTERVQQITRLEP 845
Score = 41 (19.5 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 306 LKKISEDDALGNNPSGTR------DGPTTRMGLSGIRIVEEDGVVPSRR 348
L+ + +A P G R + T + + GIR+V + G V ++R
Sbjct: 423 LRPEKQKEAFRKTPQGARKVIISTNIAETSVTIPGIRVVIDSGKVKTKR 471
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 1049 (374.3 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 249/636 (39%), Positives = 363/636 (57%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 582
LP+ + + ++ QA+ +QV++V GETGSGKTTQ+ + AE G G IG TQPRR+AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 583 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIML 642
SVA R+AEE LG VGY +RF D T IK MTDG+LL EI D L+QY I++
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 643 DEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPV 702
DEAHER+++ D + G LKQL+ RRPDL++I+TSAT+D E+FS +F N I + GRT+PV
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPV 266
Query: 703 EILYT-------KQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 755
E+ Y + + D L+ V ++ E GDIL+F+ G+ EI +L +R
Sbjct: 267 EVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKR- 324
Query: 756 KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 815
N+ + I+P+Y+ L + Q++IF P G+R +V+ATN+AE SLT+ GI YVIDP
Sbjct: 325 -----NLRDTEIVPLYARLSAGEQNKIFQPHA-GRR-IVLATNVAETSLTVPGIKYVIDP 377
Query: 816 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI 875
G A+ + Y+ + + L I PISQASA QR GR GRT G C RLY+E + + T
Sbjct: 378 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTD- 436
Query: 876 PEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL-----DEEGL 930
PEI R NL L M A+G+ D+ +F F++ P + + + L LGA+ D +
Sbjct: 437 PEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKR 496
Query: 931 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKR 990
LT+ G+++A P+DP L++M+L + LGC E++ I + + + RP +KQ AD K
Sbjct: 497 LTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKH 556
Query: 991 AKFFQPEGDHLTLLAVY----EAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+F + D LTL+ ++ + KA N C +++ +R QDV QL
Sbjct: 557 RRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQST 616
Query: 1045 DKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1104
+ + ++ + AI G H KD ++ N I P+S LF++QP
Sbjct: 617 REMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARNARFNIFPASGLFKKQP 676
Query: 1105 DWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
WV+ ELV T+K + R V I+P W+ LA K
Sbjct: 677 KWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSK 712
Score = 39 (18.8 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 1120 MREVTVIDPKWLVDLAPRFFKV 1141
M VTV+ W +D P K+
Sbjct: 961 MTGVTVLREDWKLDQLPAHLKI 982
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 1049 (374.3 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 249/636 (39%), Positives = 363/636 (57%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 582
LP+ + + ++ QA+ +QV++V GETGSGKTTQ+ + AE G G IG TQPRR+AA
Sbjct: 87 LPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAAR 146
Query: 583 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIML 642
SVA R+AEE LG VGY +RF D T IK MTDG+LL EI D L+QY I++
Sbjct: 147 SVANRIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIII 206
Query: 643 DEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPV 702
DEAHER+++ D + G LKQL+ RRPDL++I+TSAT+D E+FS +F N I + GRT+PV
Sbjct: 207 DEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKHFSNAPIIEVSGRTYPV 266
Query: 703 EILYT-------KQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 755
E+ Y + + D L+ V ++ E GDIL+F+ G+ EI +L +R
Sbjct: 267 EVRYRPLAGDDDSESDRDQLEGIFQAVDEL-CDEGLGDILIFMNGEREIRDTADALSKR- 324
Query: 756 KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 815
N+ + I+P+Y+ L + Q++IF P G+R +V+ATN+AE SLT+ GI YVIDP
Sbjct: 325 -----NLRDTEIVPLYARLSAGEQNKIFQPHA-GRR-IVLATNVAETSLTVPGIKYVIDP 377
Query: 816 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI 875
G A+ + Y+ + + L I PISQASA QR GR GRT G C RLY+E + + T
Sbjct: 378 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTD- 436
Query: 876 PEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL-----DEEGL 930
PEI R NL L M A+G+ D+ +F F++ P + + + L LGA+ D +
Sbjct: 437 PEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKR 496
Query: 931 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKR 990
LT+ G+++A P+DP L++M+L + LGC E++ I + + + RP +KQ AD K
Sbjct: 497 LTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKH 556
Query: 991 AKFFQPEGDHLTLLAVY----EAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+F + D LTL+ ++ + KA N C +++ +R QDV QL
Sbjct: 557 RRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQST 616
Query: 1045 DKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1104
+ + ++ + AI G H KD ++ N I P+S LF++QP
Sbjct: 617 REMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARNARFNIFPASGLFKKQP 676
Query: 1105 DWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
WV+ ELV T+K + R V I+P W+ LA K
Sbjct: 677 KWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSK 712
Score = 39 (18.8 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 1120 MREVTVIDPKWLVDLAPRFFKV 1141
M VTV+ W +D P K+
Sbjct: 961 MTGVTVLREDWKLDQLPAHLKI 982
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 244/636 (38%), Positives = 365/636 (57%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+LP+ + K+++++A+ D+QV++V GETGSGKTTQ+ + E G +G IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+VA R+AEE G +GY +RF D +T++K MTDG+LL EI D L QY I+
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
+DEAHER+++ D L G LK+L+ RRPDL++I+TSAT+D E+FS +F N I + GRT+P
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYP 255
Query: 702 VEILY------TKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERM 755
VE+ Y E D L A V ++ E GDIL+F++G+ EI +L +
Sbjct: 256 VEVRYRPIVEEADDTERDQLQAIFDAVDELS-QESHGDILIFMSGEREIRDTADALNKL- 313
Query: 756 KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDP 815
N+ ILP+Y+ L + Q+R+F + G+R +V+ATN+AE SLT+ GI YVIDP
Sbjct: 314 -----NLRHTEILPLYARLSNSEQNRVFQ-SHSGRR-IVLATNVAETSLTVPGIKYVIDP 366
Query: 816 GFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI 875
G A+ + Y+ + + L I PISQASA QR GR GR G C RLY+E + + T
Sbjct: 367 GTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD- 425
Query: 876 PEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL--DEEGL--- 930
PEI R NL L M A+G+ D+ +F F++ P + + + L LGA+ DE+
Sbjct: 426 PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYK 485
Query: 931 LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKR 990
LT LGR++++ P+DP L++M+L + GC E + I + + + RP +KQ +D+K
Sbjct: 486 LTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKH 545
Query: 991 AKFFQPEGDHLTLLAVY----EAWKA--KNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+F E D L + ++ E KA N C +++ +R QD+ QL ++
Sbjct: 546 RRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVV 605
Query: 1045 DKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1104
+ + V S + +I A+ G H KD + T N I P S LF++ P
Sbjct: 606 KELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPP 665
Query: 1105 DWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFK 1140
WV+ ELV T++ + R IDP+W+ +A K
Sbjct: 666 KWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIK 701
>UNIPROTKB|Q7L7V1 [details] [associations]
symbol:DHX32 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX32" species:9606 "Homo sapiens"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 PROSITE:PS51194 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 EMBL:CH471066 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 EMBL:AY064247 EMBL:AL360176
UniGene:Hs.370292 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOVERGEN:HBG039428 EMBL:AF427340 EMBL:AF427341 EMBL:AY064250
EMBL:AK001556 EMBL:AK001751 EMBL:AK024869 EMBL:BC002473
EMBL:BC037925 EMBL:BC068471 EMBL:AL162051 IPI:IPI00334601
IPI:IPI00644447 PIR:T47184 RefSeq:NP_060650.2
ProteinModelPortal:Q7L7V1 SMR:Q7L7V1 IntAct:Q7L7V1 STRING:Q7L7V1
PhosphoSite:Q7L7V1 DMDM:74759011 PRIDE:Q7L7V1 DNASU:55760
Ensembl:ENST00000284688 Ensembl:ENST00000284690
Ensembl:ENST00000368721 Ensembl:ENST00000415732 GeneID:55760
KEGG:hsa:55760 UCSC:uc001lje.1 UCSC:uc001ljf.1 CTD:55760
GeneCards:GC10M127515 HGNC:HGNC:16717 HPA:HPA048872 MIM:607960
neXtProt:NX_Q7L7V1 PharmGKB:PA27219 InParanoid:Q7L7V1 OMA:LACEQDI
OrthoDB:EOG4N30NF PhylomeDB:Q7L7V1 ChiTaRS:DHX32 GenomeRNAi:55760
NextBio:60779 Bgee:Q7L7V1 Genevestigator:Q7L7V1 Uniprot:Q7L7V1
Length = 743
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 230/667 (34%), Positives = 378/667 (56%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIGCT 574
++R+ LPI+K K ++ + NQ+++V G+ GK+ QV Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVICT 116
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
Q + + +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFL 176
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
Y VI+LD+ HER+I TDVL GLLK ++ RP+L+LI+ S+ K + Y+ N +
Sbjct: 177 GSYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLNSYYGNVPVIE 236
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
+ + PVE++Y + + D ++ L + +IH + +GDI++FL +++I+ C+++Y+
Sbjct: 237 VKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQG 295
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK-------RKVVVATNIAEASLTID 807
L ++ EL+++P+Y P E S +F P + R+VV+ T+ E + +
Sbjct: 296 -SNLNPDLGELVVVPLY---PKEKCS-LFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSN 350
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
+ +VID G ++ VYNP+ +SLV+ PISQ+ A+ R G + GK + LYTE
Sbjct: 351 SVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFAS 410
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
+M+P E+Q NL L MK + I L DFM+ P+P++L+ A+E L L ALD
Sbjct: 411 KDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 470
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF-YRPREKQAQA 986
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ N F + P + A
Sbjct: 471 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAA 530
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWK--AKNFSGP-----WCFENFVQSRSLRRAQDVRKQ 1039
F PEGDH TL+++Y+A++ N S WC + F+ +LR A +R +
Sbjct: 531 LTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMADVIRAE 590
Query: 1040 LLSIMDKYKLD----VMSAGKNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVYIH 1094
LL I+ + +L + +N I+KA+ +G+F AR D Y L Q +H
Sbjct: 591 LLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLH 650
Query: 1095 PSS--ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
P S ++ ++ P+WV++H+ ++ Y+R + I P+ + L P+++ P SK
Sbjct: 651 PLSGYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLVPQYYFSNLPPSESKDIL 710
Query: 1153 QERIEPL 1159
Q+ ++ L
Sbjct: 711 QQVVDHL 717
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 1008 (359.9 bits), Expect = 1.1e-101, P = 1.1e-101
Identities = 190/381 (49%), Positives = 263/381 (69%)
Query: 779 QSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPIS 838
Q++IF AP G RK +VATNIAE SLT+DGI +VID G+ K V+NP+ G+D+L I PIS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 839 QASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDL 898
QA+A QR+GRAGRTGPG+C+RLYT+SAY+NE+ T++PEIQR NL L +K++G+ DL
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKSLGVQDL 218
Query: 899 LSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLG 958
L F FMDPP ++++M QL+ LGALD G LT GR M EFPLDP LSKML+ S D+G
Sbjct: 219 LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVSCDMG 278
Query: 959 CSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP 1018
CS EIL I++M+ IFYRP+ ++ ++DQ R KF PE DHLT L VY WK N+S
Sbjct: 279 CSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKNNNYSTI 338
Query: 1019 WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDP 1078
WC ++F+ ++++R+ ++VR QL IM + ++ + S G ++ +RK I A +F AA+
Sbjct: 339 WCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQAAKLKG 398
Query: 1079 QEGYRTLVENQPVYIHPSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
Y + P ++HP+S+LF PD+++YHELVMTTKEYM+ VT +D +WL +L P
Sbjct: 399 IGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEWLAELGP 458
Query: 1137 RFFKVADPTKMSKRKRQERIE 1157
F+ V K + R+ E
Sbjct: 459 MFYSVKQAGKSRQENRRRAKE 479
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 1002 (357.8 bits), Expect = 4.9e-101, P = 4.9e-101
Identities = 226/601 (37%), Positives = 349/601 (58%)
Query: 502 FGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
FG+ FG+ +KL Q +R +LPI + ++Q + ++QV+VV G+TG GK+TQV QYL
Sbjct: 143 FGQKQAFGRLAKL--QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL 200
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
AG++ + CTQPRR+A +S+AKRV E + G +VGY IRFE T I ++T
Sbjct: 201 AAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTV 257
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR+I + +L QY V+++DE HER +H D L G+L++L+ RPDL++I+ SAT++
Sbjct: 258 GLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINIS 317
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQ---P---ESDYLDAS-LITVLQI--HLTEPE- 731
FS YF N + +PGR FP+ ++Y Q P +S+ LD + VL+ H PE
Sbjct: 318 LFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEE 377
Query: 732 -GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
GD+L+FL+G EI ++ E + + ++LP++SAL Q ++FD APPG
Sbjct: 378 RGDLLVFLSGMAEIS----AVLEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGV 433
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ L L ISQASA+QR GRAG
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 910
RTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + D +F F++PP P
Sbjct: 494 RTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPA 552
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
+L +A+ L GALD LT +G +A+ P+D + KML+ + +LTI A +
Sbjct: 553 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAAL 612
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW------KAKNFSGPWCFENF 1024
+ F R + + R +GD TL V+ AW +++N S WC
Sbjct: 613 SVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRRRG 671
Query: 1025 VQSRSLRRAQDVRKQLLSIMDKYKL----DVMSAGKNFTKIRKAITAGFFFHAARKDPQE 1080
++ L ++R+Q +++ + L G +++++++ H ++ +E
Sbjct: 672 IEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRERRAL-HQLKRQHEE 730
Query: 1081 G 1081
G
Sbjct: 731 G 731
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 221/564 (39%), Positives = 335/564 (59%)
Query: 506 LTFGQR---SKLS-IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
L F Q+ SKLS ++ +++SLPI++ + ++++ V + V+VV G+TG GK+TQV QYL
Sbjct: 141 LDFNQKQSFSKLSKLRREQKSLPIFQYRDKIVELVRTHPVVVVAGDTGCGKSTQVPQYLL 200
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
+G I CTQPRR+A +S+AKRV+ E + G +VGY IRFE T + ++T+
Sbjct: 201 ASGINN---IACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFETSRTLATKLLFLTE 257
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR+I D +L QY V+++DE HER +H D L G+L+ L+ RPDLRL++ SAT++ +
Sbjct: 258 GLLLRQIQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLRPDLRLVLMSATINIK 317
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQP------ESDYLDAS-LITVLQ-IHLTEPE-- 731
FS YF + + +PGR FP++++Y P S+ LD + VLQ I P+
Sbjct: 318 LFSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEE 377
Query: 732 -GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
GD+LLFL+G EI ++ E + + I+LP++S L Q ++FD APPG
Sbjct: 378 RGDLLLFLSGVAEIS----TIQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGV 433
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK +++TNIAE S+TIDG+ +V+D G K+ ++PK + L IS+AS++QR GRAG
Sbjct: 434 RKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAG 493
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 910
RTGPG CYRLY+ES Y + +P +PEI R+ L L MK+MG+ D +F F+DPP
Sbjct: 494 RTGPGVCYRLYSESDY-DAFAPYPVPEIHRVALDSLILQMKSMGLGDPRTFTFIDPPPAS 552
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
++ +A+ L GALDE G LT +GR +A+ P+D + KML+ + +LT+ A +
Sbjct: 553 SIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAAL 612
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW---KAKNFSGP--WCFENFV 1025
+ F R + R GD TL+ + AW KA SG WC +
Sbjct: 613 SVQSPFLRSAQHNPDCSTARQPLNSNHGDPFTLMNTFNAWVQVKADRGSGSRKWCRRRGL 672
Query: 1026 QSRSLRRAQDVRKQLLSIMDKYKL 1049
+ + L ++R+Q ++ + L
Sbjct: 673 EEQRLYEMVNLRRQFKELLRSHGL 696
>MGI|MGI:2141813 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
MGI:MGI:2141813 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0004386 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
ChiTaRS:DHX32 EMBL:AY065980 EMBL:AK033624 EMBL:AK169005
EMBL:AK172504 EMBL:BC006911 EMBL:BC022920 IPI:IPI00127679
IPI:IPI00830523 RefSeq:NP_598702.1 UniGene:Mm.199223
ProteinModelPortal:Q8BZS9 SMR:Q8BZS9 PaxDb:Q8BZS9 PRIDE:Q8BZS9
Ensembl:ENSMUST00000033290 Ensembl:ENSMUST00000063669 GeneID:101437
KEGG:mmu:101437 UCSC:uc009kdj.1 InParanoid:Q8BZS9 NextBio:354922
Bgee:Q8BZS9 CleanEx:MM_DHX32 Genevestigator:Q8BZS9 Uniprot:Q8BZS9
Length = 744
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 225/657 (34%), Positives = 369/657 (56%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIGCT 574
++R+ LPI+K K ++++ NQV+VV G++ GK++QV Q+ AE + + G + CT
Sbjct: 57 KEREELPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 116
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
Q + A+ +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QAHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFL 176
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LIV + L K S Y+ + +
Sbjct: 177 GSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIVNCSPLLTSKLSSYYGDVPVIE 236
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
+ + PVE++Y + D ++ + + +IH + +GD+++FL +++I+ + + +
Sbjct: 237 VRNK-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQE 295
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK-------RKVVVATNIAEASLTID 807
L +V +L+++P+Y P E S +F P + R+VV+ T+ E+ +
Sbjct: 296 GSNLNPDVGDLVVIPLY---PKEKCS-LFRPVDETEKRCQVYQRRVVLTTSCGESLIWSH 351
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
+ +VID G ++ VYNP+ +SLV+ PISQ+ A+ R G + GK + LYTE
Sbjct: 352 TVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFAS 411
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
+M P E+Q NL L MK + I L DFM+ P+P++L+ A+E L L ALD
Sbjct: 412 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR-PREKQAQA 986
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ + F P + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAA 531
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWK--AKNFSGP-----WCFENFVQSRSLRRAQDVRKQ 1039
F PEGDH TL+ VY A++ N + WC + F+ +LR A +R +
Sbjct: 532 VTCWKTFLHPEGDHFTLINVYNAYQDTVLNSANEHCVEMWCHDCFLSCSALRMADVIRAE 591
Query: 1040 LLSIMDKYKLD----VMSAGKNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVYIH 1094
LL I+ + +L + +N I+KA+ +G+F AR D Y L Q +H
Sbjct: 592 LLEIIKRIELPYAEPAFGSKENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLH 651
Query: 1095 PSSA--LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
P S+ + ++ P+WV++H+ ++ Y+R + + P+ + L P+++ P SK
Sbjct: 652 PLSSYSITKKMPEWVLFHQFSISENNYIRVASAVSPELFMQLVPQYYFSNLPPSESK 708
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 219/565 (38%), Positives = 334/565 (59%)
Query: 502 FGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
F + FG+ +KL Q +R +LPI + ++Q + ++QV+VV G+TG GK+TQV QYL
Sbjct: 147 FSQKQAFGRLAKL--QHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL 204
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
AG++ + CTQPRR+A +S+AKRV+ E + G +VGY IRFE T I ++T
Sbjct: 205 AAGFS---HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTV 261
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR+I + +L QY V+++DE HER +H D L G+L++L+ +RPDL++I+ SAT++
Sbjct: 262 GLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINIS 321
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQ---P---ESDYLDAS-LITVLQI----HLTEP 730
FS YF + +PGR FP+ ++Y Q P +S+ LD + VL+ + E
Sbjct: 322 LFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEE 381
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
GD+L+FL+G EI S+ E + ++LP++SAL Q ++FD APPG
Sbjct: 382 RGDLLVFLSGMAEIS----SVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGV 437
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ L L ISQASA+QR GRAG
Sbjct: 438 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAG 497
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 910
RTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + D +F F++PP P
Sbjct: 498 RTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPA 556
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
+L +A+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 557 SLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAAL 616
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW------KAKNFSGPWCFENF 1024
+ F R + + R +GD TL V+ AW +++N S WC
Sbjct: 617 SVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRHRG 675
Query: 1025 VQSRSLRRAQDVRKQLLSIMDKYKL 1049
++ L ++R+Q +++ + L
Sbjct: 676 IEEHRLYEMANLRRQFKELLEDHGL 700
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 219/565 (38%), Positives = 334/565 (59%)
Query: 502 FGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
F + FG+ +KL Q +R +LPI + ++Q + ++QV+VV G+TG GK+TQV QYL
Sbjct: 142 FSQKQAFGRLAKL--QHERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL 199
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
AG++ + CTQPRR+A +S+AKRV+ E + G +VGY IRFE T I ++T
Sbjct: 200 AAGFS---HVACTQPRRIACISLAKRVSFESLSQYGSQVGYQIRFESTRTAATKIVFLTV 256
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR+I + +L QY V+++DE HER +H D L G+L++L+ +RPDL++I+ SAT++
Sbjct: 257 GLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKRPDLKVILMSATINIS 316
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQ---P---ESDYLDAS-LITVLQI----HLTEP 730
FS YF + +PGR FP+ ++Y Q P +S+ LD + VL+ + E
Sbjct: 317 LFSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEE 376
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
GD+L+FL+G EI S+ E + ++LP++SAL Q ++FD APPG
Sbjct: 377 RGDLLVFLSGMAEIS----SVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGV 432
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ L L ISQASA+QR GRAG
Sbjct: 433 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAG 492
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 910
RTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + D +F F++PP P
Sbjct: 493 RTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPA 551
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
+L +A+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 552 SLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAAL 611
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW------KAKNFSGPWCFENF 1024
+ F R + + R +GD TL V+ AW +++N S WC
Sbjct: 612 SVQSPFTRSAQSNPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERSRN-SRKWCRHRG 670
Query: 1025 VQSRSLRRAQDVRKQLLSIMDKYKL 1049
++ L ++R+Q +++ + L
Sbjct: 671 IEEHRLYEMANLRRQFKELLEDHGL 695
>UNIPROTKB|A7MBI4 [details] [associations]
symbol:DHX32 "DHX32 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005524 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:55760 OMA:LACEQDI OrthoDB:EOG4N30NF
EMBL:DAAA02059534 EMBL:DAAA02059535 EMBL:DAAA02059536 EMBL:BC151578
IPI:IPI00715161 RefSeq:NP_001094614.1 UniGene:Bt.44006
Ensembl:ENSBTAT00000007619 GeneID:532978 KEGG:bta:532978
InParanoid:A7MBI4 NextBio:20875863 Uniprot:A7MBI4
Length = 744
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 225/667 (33%), Positives = 373/667 (55%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT---RGKIGCT 574
++R+ LPI+K K ++ + +Q+++V G+ GK++QV Q+ AE + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMEKLLQSQIVIVSGDAKCGKSSQVPQWCAEYCLSIDYRHGGVVCT 116
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
Q + A+ +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKPTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFL 176
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LI+ S+ K S Y+ N +
Sbjct: 177 GSYGVIILDDIHERSMATDVLLGLLKDVLLARPELKLIINSSPHLINKLSSYYGNVPLIQ 236
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
+ + PVE +Y + + ++ L + +IH + +GDI++FL +++I+ A + + +
Sbjct: 237 VKNK-HPVEAVYLSGAQKESFESILRLIFEIHHSGEKGDIVVFLACEQDIEKAYEIVCQE 295
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDP-------APPGKRKVVVATNIAEASLTID 807
L ++ EL+++P+Y P E + +F P P +R+VV+ + E+ + +
Sbjct: 296 GSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCPVYQRRVVLTASSGESLICSN 351
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
+ +VID G ++ VYNP+ DSLV PISQ+ A+ R + GK + LY+E
Sbjct: 352 TVKFVIDVGVERRKVYNPRIRADSLVTQPISQSQAETRKQILSASPSGKLFCLYSEEFAS 411
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
+M P E+Q NL L MK + I L DFM+ P+P++L+ A+E L L ALD
Sbjct: 412 RDMQPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF-YRPREKQAQA 986
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ N F + PR + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPRGAEEAA 531
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-------WCFENFVQSRSLRRAQDVRKQ 1039
F P+GDH TL+ +Y+A++ + WC + F+ +LR A+ +R +
Sbjct: 532 LSCWKTFLHPDGDHFTLINIYKAYQDMTLNAASEHCVEKWCHDYFLNCSALRTAEVIRAE 591
Query: 1040 LLSIMDKYKLD----VMSAGKNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVYIH 1094
LL I+ + +L + +N I+KA+ +G+F AR D Y L Q +H
Sbjct: 592 LLEIIKRIELPYTEPAFGSKENTLNIKKALLSGYFMQIARDVDGAGNYLMLTHKQVAQLH 651
Query: 1095 PSS--ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKR 1152
P S ++ ++ P+WV++H+ + Y+R + I P+ + LAP+++ P SK
Sbjct: 652 PLSCYSVARKMPEWVLFHKFSIANNNYIRTASEIAPELFMQLAPQYYFSNLPPSESKDIL 711
Query: 1153 QERIEPL 1159
Q+ ++ L
Sbjct: 712 QQVMDHL 718
>RGD|1311740 [details] [associations]
symbol:Dhx32 "DEAH (Asp-Glu-Ala-His) box polypeptide 32"
species:10116 "Rattus norvegicus" [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
RGD:1311740 GO:GO:0004386 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
OrthoDB:EOG4N30NF EMBL:CH473953 IPI:IPI00366073
RefSeq:NP_001123511.1 UniGene:Rn.162500 Ensembl:ENSRNOT00000024655
GeneID:361667 KEGG:rno:361667 UCSC:RGD:1311740 NextBio:677165
Uniprot:D3ZGJ0
Length = 751
Score = 985 (351.8 bits), Expect = 3.1e-99, P = 3.1e-99
Identities = 223/657 (33%), Positives = 367/657 (55%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIGCT 574
++R+ LPI+K K ++++ NQV++V G++ GK++QV Q+ AE + + G + CT
Sbjct: 64 KEREELPIWKEKYSFMESLLQNQVVLVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVICT 123
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
Q + A+ +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 124 QVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFL 183
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
Y VI+LD+ HER++ TDVL GLLK ++ RP+L+LI+ + + S Y+ N +
Sbjct: 184 GSYGVIILDDVHERSLATDVLLGLLKDVLLARPELKLIINCSPFLISRLSSYYGNVPLLE 243
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
+ + PVE++Y + D ++ + + +IH + +GD+++FL +++I+ + + +
Sbjct: 244 VRNK-HPVEVVYLSGAQKDPFESVVRLIFEIHRSGEQGDVVVFLACEQDIEKTYEIVCQE 302
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPP-------GKRKVVVATNIAEASLTID 807
L +V EL+++P+Y P E S +F P +R+VV+ T+ E+ +
Sbjct: 303 GSNLNPDVGELVVIPLY---PKEKCS-LFRPVDETEKRCQASQRRVVLTTSCGESLIWSH 358
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
+ +VID G ++ VYNP+ +SLV+ PISQ+ A+ R G + GK + LYTE
Sbjct: 359 TVRFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFAS 418
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
+M P E+Q NL L MK + I L DFM+ P+P++L+ A+E L L ALD
Sbjct: 419 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDN 478
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR-PREKQAQA 986
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ + F P + A
Sbjct: 479 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEAA 538
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWK--AKNFSGP-----WCFENFVQSRSLRRAQDVRKQ 1039
F PEGDH TL+ +Y A++ N + WC F+ +LR A +R +
Sbjct: 539 VTCWKTFLHPEGDHFTLINIYNAYQDTVLNSANEHCVETWCHNCFLSCSALRMADVIRAE 598
Query: 1040 LLSIMDKYKLD----VMSAGKNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVYIH 1094
LL I+ + +L + +N I+KA+ +G+F AR D Y L Q +H
Sbjct: 599 LLEIIKRIELPYAEPAFGSQENGLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLH 658
Query: 1095 PSS--ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
P S A+ ++ P+WV++H+ ++ Y+R + + P+ + L P+++ P SK
Sbjct: 659 PLSSYAITKKMPEWVLFHQFSISENNYIRVTSAVSPELFMQLVPQYYFSNLPPSESK 715
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 222/600 (37%), Positives = 348/600 (58%)
Query: 502 FGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
F + FG+ +KL Q +R +LPI + ++Q + ++QV+VV G+TG GK+TQV QYL
Sbjct: 145 FQQKQAFGRLAKL--QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL 202
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
AG++ + CTQPRR+A +S+AKRV E + G +VGY IRFE T I ++T
Sbjct: 203 AAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTV 259
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR+I + +L QY V+++DE HER +H D L G+L++L+ +RPDL++I+ SAT++
Sbjct: 260 GLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINIS 319
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQP------ESDYLDAS-LITVLQI----HLTEP 730
FS YF + + +PGR FP+ ++Y Q +S+ LD + VL+ + E
Sbjct: 320 LFSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEE 379
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
GD+L+FL+G EI ++ + + ++LP++SAL Q ++FD AP G
Sbjct: 380 RGDLLVFLSGMAEIT----TVLDAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGV 435
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ L L ISQASA+QR GRAG
Sbjct: 436 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 495
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 910
RTGPG CYRLY ES Y + +P +PEI+R+ L L MK+M + D +F F++PP P
Sbjct: 496 RTGPGVCYRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPA 554
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
++ +A+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 555 SVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAAL 614
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW-KAKNF-SG---PWCFENFV 1025
+ F R + R +GD TL V+ AW + K+ SG WC V
Sbjct: 615 SVQSPFTRSAQSNLDCATARRPLESDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGV 674
Query: 1026 QSRSLRRAQDVRKQLLSIMDKYKL----DVMSAGKNFTKIRKAITAGFFFHAARKDPQEG 1081
+ L ++R+Q +++ + L V++ G +++++++ H ++ +EG
Sbjct: 675 EEHRLYEMANLRRQFKELLEDHGLLSGAQVVAPGDSYSRLQQRRERRAL-HQLKRQHEEG 733
>UNIPROTKB|F1PER1 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 GO:GO:0005524 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:55760 OMA:LACEQDI
EMBL:AAEX03015636 RefSeq:XP_003433686.1 Ensembl:ENSCAFT00000020520
GeneID:100685023 KEGG:cfa:100685023 Uniprot:F1PER1
Length = 745
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 226/657 (34%), Positives = 369/657 (56%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIGCT 574
++R+ LPI+K K ++ + NQ+++V G+ GK++QV Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSSQVPQWCAEYCLSIHYQHGGVVCT 116
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
Q + A+ +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ L
Sbjct: 117 QVHKPTAVQLALRVADEMDVNIGHEVGYMIPFENCCSSETILRYCTDDMLQREMMSSPFL 176
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
Y VI+LD+ HER+I TDVL GLLK ++ RP+L+LI+ S+ K S Y+ N +
Sbjct: 177 GNYGVIILDDIHERSIATDVLLGLLKDVLLARPELKLIINSSPHLISKLSSYYGNVPLIE 236
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
+ + PVE++Y + + L++ L + +IH + +GDI++FL +++I+ A + + +
Sbjct: 237 VK-KQHPVEVVYLSGAQKESLESILRLIFEIHQSGEKGDIVVFLACEQDIEKAYEIVCQE 295
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK-------RKVVVATNIAEASLTID 807
L ++ EL+++P+Y P E + +F P + R+VV+ + E+ + +
Sbjct: 296 GSNLNPDLGELVVVPLY---PKE-KCALFKPNDETEKRCQVYQRRVVLTASSGESLIWSN 351
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
+ +VID G ++ VYNP+ +SLV PISQ+ A+ R G + GK + LY+E
Sbjct: 352 TVRFVIDVGVERRKVYNPRIRANSLVTQPISQSQAEIRKQILGSSSSGKLFCLYSEEFAS 411
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
+M P E+Q NL L MK + I L DFM+ P+P++L+ A+E L L ALD
Sbjct: 412 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDN 471
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR-PREKQAQA 986
+G L++ G M+EFPLDP LSK +LAS + C +E+LTI AM+ N F P + A
Sbjct: 472 DGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVEEMLTIAAMVTAPNCFSNLPHGAEEAA 531
Query: 987 DQKRAKFFQPEGDHLTLLAVYEAWK--AKNFSGP-----WCFENFVQSRSLRRAQDVRKQ 1039
F PEGDH TL+ +Y+A++ A N + WC + F+ +LR A +R +
Sbjct: 532 LTCWKTFLHPEGDHFTLINIYKAYQDIALNSTSDHCVEKWCHDYFLNCCALRMADVIRAE 591
Query: 1040 LLSIMDKYKLD----VMSAGKNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVYIH 1094
LL I+ + +L + +N I+KA+ +G+F AR D Y L Q +H
Sbjct: 592 LLEIVKRIELPCAEPAFGSKENALNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQLH 651
Query: 1095 PSSA--LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
P S+ + ++ P+WV++H+ ++ Y+R + I P+ + LAP ++ P SK
Sbjct: 652 PLSSYSITKKMPEWVLFHKFSISENNYIRITSEISPELFMQLAPPYYFSNLPPSESK 708
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 217/564 (38%), Positives = 332/564 (58%)
Query: 502 FGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
F + FG+ +KL Q +R +LPI + ++Q + ++QV+VV G+TG GK+TQV QYL
Sbjct: 143 FCQKQAFGRLAKL--QRERAALPIAQYGHHILQMLKEHQVVVVAGDTGCGKSTQVPQYLL 200
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
AG + + CTQPRR+A +S+AKRV E + G +VGY IRFE T I ++T
Sbjct: 201 AAGCS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTV 257
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR++ + +L QY V+++DE HER +H D L G+L++L+ +RPDL++++ SAT++
Sbjct: 258 GLLLRQMQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVVLMSATINIS 317
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQ---P---ESDYLDAS-LITVLQI----HLTEP 730
FS YF N + +PGR FP+ ++Y Q P +S+ LD + VL+ + E
Sbjct: 318 LFSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEE 377
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
GD+L+FL+G EI ++ E + + ++LP++SAL Q ++FD APPG
Sbjct: 378 RGDLLVFLSGMAEIS----AVLEPAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPPGV 433
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ L L ISQASA+QR GRAG
Sbjct: 434 RKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAG 493
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQ 910
RTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + D +F F++PP P
Sbjct: 494 RTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPT 552
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
+L +A+ L GALD LT +G +A+ P+D + KML+ ++ +LTI A +
Sbjct: 553 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAAL 612
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW-KAKNFSG----PWCFENFV 1025
F R + + R +GD TLL V+ W + K+ G WC +
Sbjct: 613 SVQTPFTRSAQSNPECAATRRPLESDQGDPFTLLNVFNTWVQVKSERGRNSRKWCRHRGI 672
Query: 1026 QSRSLRRAQDVRKQLLSIMDKYKL 1049
+ L ++R+Q +++ + L
Sbjct: 673 EEHRLYEMANLRRQFKELLEDHGL 696
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 977 (349.0 bits), Expect = 2.2e-98, P = 2.2e-98
Identities = 219/629 (34%), Positives = 357/629 (56%)
Query: 521 QSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVA 580
+ LP+Y K +++ A+ + V+VV TGSGKTTQ+ L EAGY G IG TQPRR+A
Sbjct: 5 KQLPVYSQKDKILSALAHHHVIVVESPTGSGKTTQLPLILHEAGYNEGGAIGVTQPRRIA 64
Query: 581 AMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVI 640
+SV++ +A++ VGY +RFED T +T IK MTDG+LL+E+ +D LS+YS+I
Sbjct: 65 VLSVSEFIAKQVLHVQPGIVGYKMRFEDHTDVETKIKVMTDGILLQEMKLDPLLSKYSII 124
Query: 641 MLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 700
M+DEAHER+++ D + GLLK+++++R D R++++SAT++ FS YF C + I +
Sbjct: 125 MVDEAHERSLNIDFILGLLKRVLQQRHDFRIVISSATINTAMFSRYFNECPVIKIDAVAY 184
Query: 701 PVEILY----------TKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
PV +++ TK+ E+ L+ + V ++ + +G IL+FL G+ I
Sbjct: 185 PVTVIFDPPDTPASTHTKEAEAALLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITR 244
Query: 751 L-YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
L +ER +L +LP+Y L E Q ++F+ AP GKRKVV+ATNIAE S+TID +
Sbjct: 245 LSHERW------FRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIATNIAETSITIDDV 298
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
VID G K N YNP SL TPISQAS QR GRAGR G CYRLY+ + +
Sbjct: 299 TTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGTCYRLYSRDDFE-Q 357
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 929
P ++ EI R +L + M +GI+D FDF+ PP +I A + L LGAL+++
Sbjct: 358 REPYTLEEIYRTDLSEVVMRMAELGIHDFEHFDFISPPGTHGIIGAEDTLRLLGALEDDR 417
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDL--GCSDEILTIIAMIQTGNIFYRPREKQAQAD 987
L+++G+ M FPL P S+M++ ++ D++L A + + +++ +
Sbjct: 418 SLSEIGKMMCLFPLGPRQSRMIVEALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTK 477
Query: 988 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1047
+ F P GD ++ L +Y A+ +N +C ++ R + ++++QL I+
Sbjct: 478 KAHGTFSDPMGDFVSFLRIYRAYAQENNKHSFCQHFYLDERIMAEISNIKEQLELIVSGM 537
Query: 1048 KLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1107
+++ G + + G ++ ++ YR+L + ++IHP S +++ +P ++
Sbjct: 538 GFPLLTGG-TVEEYLICVGTGMIQFVCVQEHRDSYRSLTA-ECIHIHPGSCVYKDRPKFI 595
Query: 1108 IYHELVMTTKEYMREVTVIDPKWLVDLAP 1136
+ E+V T++ Y V+ + K +AP
Sbjct: 596 VAGEIVRTSRMYAMSVSPLSKKIAELIAP 624
>UNIPROTKB|B0V0F8 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR002464 InterPro:IPR011545
Pfam:PF00270 PROSITE:PS00690 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG039428 HGNC:HGNC:2739 OrthoDB:EOG4VHK5Q EMBL:CR759873
IPI:IPI00894081 SMR:B0V0F8 Ensembl:ENST00000450902 Uniprot:B0V0F8
Length = 669
Score = 936 (334.5 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 171/283 (60%), Positives = 228/283 (80%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG- 569
+ K SIQ R+SLP++ ++EL+ A+ ++QVL++ GETGSGKTTQ+ QYL E GYT +G
Sbjct: 387 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGM 446
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRRVAAMSVA RVA E G +LG EVGY+IRFEDCT TV++YMTDGMLLRE L
Sbjct: 447 KIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFL 506
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ +L+ YSV+M+DEAHERT+HTD+LFGL+K + + RP+L+++V SAT+D +FS +F +
Sbjct: 507 SEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDD 566
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQ 749
+F IPGR FPV+I YTK PE+DYL+A +++VLQIH+T+P GDIL+FLTGQEEI+ AC+
Sbjct: 567 APVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACE 626
Query: 750 SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRK 792
L +R + LG + EL++LP+Y+ LPS+MQ+RIF P PPG RK
Sbjct: 627 MLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARK 669
Score = 60 (26.2 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 22 VCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKE 60
V EL + LG ++ +A+F+ + C + +EF +L++
Sbjct: 11 VQDELHSVLGLSERHVAQFLIGTAQRCTSAEEFVQRLRD 49
>UNIPROTKB|F1SDM5 [details] [associations]
symbol:DHX32 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
OMA:LACEQDI EMBL:CT841550 Ensembl:ENSSSCT00000011756 Uniprot:F1SDM5
Length = 742
Score = 973 (347.6 bits), Expect = 5.8e-98, P = 5.8e-98
Identities = 225/658 (34%), Positives = 370/658 (56%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIGCT 574
++R+ LPI+K K ++ + +QV++V G+ GK++QV Q+ AE + + G + CT
Sbjct: 57 KEREDLPIWKEKYSFMENLLQSQVVIVSGDATCGKSSQVPQWCAEYCLSIHYQHGGVVCT 116
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
Q + A+ +A RVA+E +G EVGY I FE+C +T+++Y TD ML RE++ + L
Sbjct: 117 QVHKQTAVQLALRVADEMDVNIGHEVGYVIPFENCCTSETILRYCTDDMLQREMMSNPFL 176
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
Y VI+LD+ ER+I TDVL GLLK ++ RP+L+LI+ S+ S Y+ N +
Sbjct: 177 GSYGVIILDDVQERSIATDVLLGLLKDVLLARPELKLIINSSPHLISTLSSYYGNVPLIE 236
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYER 754
+ + PVE++Y + + L+A L + +IH + EGDI++FL +++I+ A + + +
Sbjct: 237 VTSKR-PVEVVYLSGAQKEALEAVLRLIFEIHHSGEEGDIVVFLACEQDIEKAYEIVCQE 295
Query: 755 MKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK-------RKVVVATNIAEASLTID 807
L ++ EL+++P+Y P E + +F P + R+VV+ + E+ + +
Sbjct: 296 GTNLNPDLGELVVVPLY---PKE-KCALFKPNDEAEKRCQVYQRRVVLTASSGESLIWSN 351
Query: 808 GIFYVIDPGFAKQN-VYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 866
+ +VID G ++ VY+P+ DSLV+ PISQ+ A+ R G + GK + LY+E
Sbjct: 352 TVRFVIDVGVERRKKVYSPRIRADSLVLQPISQSQAEMRKQVLGSSSSGKLFCLYSEEFA 411
Query: 867 RNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 926
+M P E+Q NL L MK + I L DFM+ P+P++L+ A+E L L ALD
Sbjct: 412 SKDMRPLKPAEMQHANLTSMVLFMKRVDIAGLGHCDFMNRPAPESLMQALEDLDYLAALD 471
Query: 927 EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF-YRPREKQAQ 985
+G L++ G M+EFPLDP LSK +LAS + C DE+LTI AM+ N F + P +A+
Sbjct: 472 NDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPNCFSHLPSGAEAE 531
Query: 986 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-------WCFENFVQSRSLRRAQDVRK 1038
A F PEGDH TL+ +Y+A++ + WC + F+ +LR A +R
Sbjct: 532 ALTCWKTFLHPEGDHFTLVNLYKAFQDVTLNSTSEHCVEKWCHDYFLNCSALRMADVIRA 591
Query: 1039 QLLSIMDKYKLD----VMSAGKNFTKIRKAITAGFFFHAARK-DPQEGYRTLVENQPVYI 1093
+LL I+ + +L + +N I+KA+ +G+F AR D Y L Q +
Sbjct: 592 ELLEIIKRIELPYAEPAFGSKENTLNIKKALLSGYFMQIARDVDGSGNYLMLTHKQVAQL 651
Query: 1094 HPSS--ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK 1149
HP S ++ ++ P+WV++H+ ++ Y+R + I P+ + L P+++ P SK
Sbjct: 652 HPLSCYSVTKKMPEWVLFHKFSISENNYIRIASEISPELFMQLVPQYYFSNLPPSESK 709
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 209/523 (39%), Positives = 314/523 (60%)
Query: 658 LLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPES 712
LLK + L+++V SATL+ EK S ++ NC +FTIPGRT+PV+ ++ K ES
Sbjct: 158 LLKGSRGNKTPLKVVVMSATLETEKLSSFYGNCPVFTIPGRTYPVKETFCNLIGPKDKES 217
Query: 713 D-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLG-------KNVPE 764
Y+ + L +H E GDIL+FLTGQ EI+ AC L+E+ + L ++V
Sbjct: 218 SVYVKEVVKMTLDVHTNEAAGDILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDG 277
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L+IL +Y ++P++ Q +IF PAP G RK VVATNIA SLTIDGI Y++D GF KQ +N
Sbjct: 278 LLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHN 337
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
+ GLD L + PIS++ A+QRAGRAGRT GKC+R+Y++ + M +IPEIQR +L
Sbjct: 338 SRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLT 397
Query: 885 FTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLD 944
LT+K +G++D++ F ++D P + +++A++QLY A+D G +TKLGR M EFPL
Sbjct: 398 SVILTLKCLGVHDVIRFPYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLP 457
Query: 945 PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPR--EKQAQADQKRAKFFQPEG---D 999
P L++ LL + LGC D +L + AM+ NIF RP EKQ +A+ + + G D
Sbjct: 458 PNLTRALLKAAALGCEDIMLPVAAMLSVENIFIRPGKPEKQKEAEVRHKEIAACSGGSND 517
Query: 1000 HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSA 1054
L LL V+E +A WC EN++ R+++ A V QL I+ + K
Sbjct: 518 FLMLLCVFEKCRASENPSAWCKENWIHWRAVKSAFSVETQLREILLRLKQQKDFPHERFE 577
Query: 1055 GKNFTKIRKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALF--QRQPDWVIYHE 1111
G +R+ + G+F + AR+ + + T+ V IHPSS LF + Q DW+I+H+
Sbjct: 578 GSRSELLRQCLCLGYFTNVARRSIGKSFCTMDGHGSSVLIHPSSCLFGQELQLDWIIFHD 637
Query: 1112 LVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQE 1154
+++T++ Y+R V I W+ DL P+ ++ D ++S R+E
Sbjct: 638 VLVTSRVYVRTVCPIRYDWVKDLLPKLHEI-DVYELSSVAREE 679
Score = 672 (241.6 bits), Expect = 1.7e-65, P = 1.7e-65
Identities = 136/256 (53%), Positives = 186/256 (72%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG 569
+RS + + + LPIY+ K +L+QAV +N L+V GETGSGKTTQ+ QYL +AG + G
Sbjct: 5 KRSSETEHHESKKLPIYQYKDKLVQAVEENTFLIVTGETGSGKTTQLPQYLYKAGLSRNG 64
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
+IG TQPRRVAA++VA+RV+ E RLGEEVGY +RF+DC+ DT+IKYMTDG LLREIL
Sbjct: 65 RIGVTQPRRVAAITVAQRVSSEMQVRLGEEVGYQVRFDDCSTKDTMIKYMTDGCLLREIL 124
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQ-LVK----RRPDLRLIVTSATLDAEKFS 684
D +L+QYS+++LDEAHER+++TDVL GLLK+ L+K + L+++V SATL+ EK S
Sbjct: 125 ADPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLS 184
Query: 685 GYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFL 738
++ NC +FTIPGRT+PV+ ++ K ES Y+ + L +H E GDIL+FL
Sbjct: 185 SFYGNCPVFTIPGRTYPVKETFCNLIGPKDKESSVYVKEVVKMTLDVHTNEAAGDILVFL 244
Query: 739 TGQEEIDFACQSLYER 754
TGQ EI+ AC L+E+
Sbjct: 245 TGQSEIEKACDLLFEK 260
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 948 (338.8 bits), Expect = 2.6e-95, P = 2.6e-95
Identities = 224/611 (36%), Positives = 348/611 (56%)
Query: 481 AQELRGVGLSAYDMPEWKKDAFGKALT----FGQR---SKLS-IQEQRQSLPIYKLKKEL 532
AQ+ RG A +P + F AL FGQ+ ++L+ +Q +R +LPI + + +
Sbjct: 115 AQDARG---PAGSLPPERVSEFRGALLHYLDFGQKQAFARLARLQRERAALPISQYRDRI 171
Query: 533 IQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEF 592
+Q + ++QV+VV G+TG GK+TQV QYL AG++ + CTQPRR+A +S+AKRV E
Sbjct: 172 LQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFS---HVACTQPRRIACISLAKRVGLES 228
Query: 593 GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHT 652
+ G +VGY IRFE T I ++T G+LLR + + L QY V+++DE HER +H
Sbjct: 229 LSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRHVQREPTLPQYRVLIVDEVHERHLHN 288
Query: 653 DVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQ--- 709
D L G+L++L+ RRPDL++I+ SAT++ FS YF + +PGR FP+ ++Y Q
Sbjct: 289 DFLLGVLQRLLPRRPDLKVILMSATVNTSLFSAYFGQAPVVQVPGRLFPITVVYQPQEAE 348
Query: 710 PESDYLDA----SLITVLQI----HLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN 761
P + L+ I VL+ + E GD+L+FL+G EI ++ + G+
Sbjct: 349 PTASTLEKLDPRPFIRVLEAIDSKYPPEERGDLLVFLSGLAEIGAVLEAAQAHARRSGR- 407
Query: 762 VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 821
++LP++S L Q ++FD APPG RK +++TNIAE S+TIDGI +V+D G K+
Sbjct: 408 ---WVVLPLHSTLSVAAQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEM 464
Query: 822 VYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRI 881
Y+P+ L L ISQASA+QR GRAGRTGPG C+RLY ES Y + +P +PEI+R+
Sbjct: 465 SYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRV 523
Query: 882 NLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEF 941
L L MK+M + D +F F++PP +L +A+ L GALD LT +G +A+
Sbjct: 524 ALDALVLQMKSMSVGDPRTFPFIEPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQL 583
Query: 942 PLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHL 1001
P+D + KML+ L ++ +LTI A + + F R + + + GD
Sbjct: 584 PVDIVIGKMLVLGSVLHLAEPVLTIAAALSVQSPFTRSTRSNPKCAWRALE--SDHGDPF 641
Query: 1002 TLLAVYEAW-KAKNF----SGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL----DVM 1052
TL V+ W + K+ S WC ++ L ++R+Q +++ + L
Sbjct: 642 TLFNVFNNWVQVKSDRSTKSRRWCRREGIEEHRLYEMANLRRQFKELLEDHGLLAGTQAP 701
Query: 1053 SAGKNFTKIRK 1063
G +++++R+
Sbjct: 702 KPGDSYSRLRQ 712
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 490 (177.5 bits), Expect = 6.9e-94, Sum P(3) = 6.9e-94
Identities = 112/246 (45%), Positives = 159/246 (64%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-RGKIGCT 574
IQE R LPI ++ +++A+++N ++V+ GETGSGKTTQV Q+L EAGYT+ G IG T
Sbjct: 235 IQEARLKLPILAEEQVIMEAINENPIVVICGETGSGKTTQVPQFLYEAGYTSSNGIIGIT 294
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
+PRRVAA+S+++RVA+E V Y IR+E T +T IK+MTDG+LL+E+ D L
Sbjct: 295 EPRRVAAVSMSQRVAKEMNLS-HRVVSYQIRYEGNTTDETQIKFMTDGVLLKEVQKDFLL 353
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSG---YF 687
S+Y VI++DEAHER+++TD+L GLL ++V K+ L+LI+ SATL E F+ F
Sbjct: 354 SKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLPLKLIIMSATLRVEDFTENTRLF 413
Query: 688 FNCN-IFTIPGRTFPVEILYTKQ-PESDYLDASLITVLQIHLTEPEGDILLFLTGQEEID 745
+ + R FPV + + K+ P DY V +IH P G IL+FLTGQ E+
Sbjct: 414 AGTPPVLQVDARQFPVTVHFNKKTPLDDYSGECFRKVCKIHRMLPSGGILVFLTGQAEVH 473
Query: 746 FACQSL 751
C+ L
Sbjct: 474 SLCRRL 479
Score = 414 (150.8 bits), Expect = 6.9e-94, Sum P(3) = 6.9e-94
Identities = 100/249 (40%), Positives = 141/249 (56%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS L E Q+++F P PPG R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 577 LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYD 636
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
G+ S +T ISQASA QRAGRAGRT PG CYRLY+ + + + S PEI + +
Sbjct: 637 KITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFM-DFEKFSAPEITKRPVE 695
Query: 885 FTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGL-------------- 930
L MKA+ I +++F F PP +AL +A E L +LGAL E +
Sbjct: 696 DLILQMKALNIEKVINFPFPTPPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLSC 755
Query: 931 -LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQK 989
++ LGR MA FP+ P +KML S C +TI++ + +F ++ A ++++
Sbjct: 756 PISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELF-EEFDRPAASEEE 814
Query: 990 RAKFFQPEG 998
K +G
Sbjct: 815 TVKLKGKKG 823
Score = 169 (64.5 bits), Expect = 6.9e-94, Sum P(3) = 6.9e-94
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 1059 TKIRKAITAGFFFHAARKDPQE---------GYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
T +R+ + AG H AR+ E Y+T + + PV+IHPSS LF++ P++V+Y
Sbjct: 912 TYLRQIVLAGLGDHLARRVQAEELLDDKWKNAYKTALLDDPVFIHPSSVLFKQLPEFVVY 971
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
E+V TTK YM+ V+ ++P+W+ L P + P
Sbjct: 972 QEIVETTKLYMKGVSAVEPEWIPALLPPYCHFGKP 1006
Score = 45 (20.9 bits), Expect = 7.2e-81, Sum P(3) = 7.2e-81
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 995 QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV--- 1051
Q GD + +L A + + +C EN ++ +++ + +R QL + ++ D
Sbjct: 839 QKLGDLMVMLGAVGACEYSGCTPKFCEENGLRYKAMLEIRRLRGQLTTAVNSVCTDAGLY 898
Query: 1052 ----MS--AGKNFTKIRKAITAGFFFHAARK 1076
M T +R+ + AG H AR+
Sbjct: 899 VDPKMKPPTEAQATYLRQIVLAGLGDHLARR 929
Score = 44 (20.5 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 633 NLSQYSVIMLDEAHE-RTIHTD 653
NL Y+V+ +DE E R TD
Sbjct: 527 NLDNYAVVPVDEGDEDRDAETD 548
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 426 (155.0 bits), Expect = 1.9e-93, Sum P(5) = 1.9e-93
Identities = 89/194 (45%), Positives = 122/194 (62%)
Query: 764 ELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVY 823
+L +LP+Y+ L Q R+F+ +R VVVATN+AE SLTI GI YV+D G K Y
Sbjct: 646 KLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNY 705
Query: 824 NPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINL 883
+ K G++S + ISQASA QRAGRAGRTGPG CYRLY+ + + N +S+PEI ++ +
Sbjct: 706 DSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPV 765
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL 943
L MK+M I + +F F PP P A+ A L +L ALD G LT LG+ M+ +P+
Sbjct: 766 DGVILLMKSMNIPKVENFPFPTPPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPM 825
Query: 944 DPPLSKMLLASVDL 957
P S+MLL + +
Sbjct: 826 SPRHSRMLLTVIQM 839
Score = 394 (143.8 bits), Expect = 1.9e-93, Sum P(5) = 1.9e-93
Identities = 77/159 (48%), Positives = 119/159 (74%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR------G 569
++E R+ LPI +++E+++A++ + +++ G+TG GKTTQV Q+L EAG+ ++ G
Sbjct: 234 VEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQVPQFLYEAGFGSKQFSSRSG 293
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
IG TQPRRVA ++ AKRVA E G RLG+EVG+ +R++ G ++ IK+MTDG+LLREI
Sbjct: 294 IIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGENSSIKFMTDGILLREIQ 353
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD 668
D L +YSVI+LDEAHER+++TD+L G+L +++K R +
Sbjct: 354 NDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQE 392
Score = 156 (60.0 bits), Expect = 1.9e-93, Sum P(5) = 1.9e-93
Identities = 39/95 (41%), Positives = 56/95 (58%)
Query: 669 LRLIVTSATLDAEKF-SGYFFNCNI---FTIPGRTFPVEILYTKQPES-DYLDASLITVL 723
L+LI+ SATL E F SG NI +P R +PV I ++K+ E DY+ + V+
Sbjct: 416 LKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKKTEIVDYIGEAYKKVM 475
Query: 724 QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGL 758
IH P+G IL+F+TGQ E+D+ C+ L + K L
Sbjct: 476 SIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKEL 510
Score = 136 (52.9 bits), Expect = 1.9e-93, Sum P(5) = 1.9e-93
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 1063 KAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMRE 1122
+AI AG+ ARK Y+ +PV++H S+L P+ ++Y EL++T + YM
Sbjct: 1010 EAICAGWADRVARKTRATEYQACAVQEPVFLHRWSSLINSAPELLVYSELLLTNRPYMHG 1069
Query: 1123 VTVIDPKWLVDLAPRFFKVADPTKMSK---RKRQERIEPLYDRYHEPNSWRL 1171
T + P+WLV A + P K K ++R+ P++W L
Sbjct: 1070 ATRVRPEWLVKHAKSLCVFSAPLKDPKPYYSSEEDRVLCWVVPSFGPHNWEL 1121
Score = 54 (24.1 bits), Expect = 1.9e-93, Sum P(5) = 1.9e-93
Identities = 12/67 (17%), Positives = 31/67 (46%)
Query: 978 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR 1037
R ++++ + R +F P D LT+ +++ +C N + +++ ++
Sbjct: 895 RKKDRKEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLK 954
Query: 1038 KQLLSIM 1044
QLL ++
Sbjct: 955 DQLLRLV 961
Score = 50 (22.7 bits), Expect = 2.2e-83, Sum P(4) = 2.2e-83
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1141 VADPTKMSKRKRQERIEPLYDRYHEPNS 1168
V K K+ R+E+I+ DR+ P+S
Sbjct: 888 VKQEDKQRKKDRKEKIKAARDRFSNPSS 915
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 724 (259.9 bits), Expect = 1.2e-92, Sum P(2) = 1.2e-92
Identities = 176/458 (38%), Positives = 259/458 (56%)
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP-EGDILLFLTGQEEIDFACQSLYE 753
I GR FPVEI+++ +P D + TV +IH EP GDIL+FL GQE I+ + + E
Sbjct: 342 IEGRQFPVEIIHSPKPVPVLADEVVKTVFKIHCGEPLPGDILVFLYGQEPIEEIQRLIEE 401
Query: 754 RMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVI 813
L +VP++ LP++ L E Q F P RKVV+ATNIAE S+T+ G+ YVI
Sbjct: 402 YAATLASDVPKIKALPLFGQLSMEAQHTAFRPLKGRVRKVVLATNIAETSVTVPGVRYVI 461
Query: 814 DPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT 873
D G +K Y GL+SL++ IS++SA QRAGRAGR PGKCYRLYTE Y+ EM
Sbjct: 462 DTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRAGREAPGKCYRLYTEDVYK-EMRDA 520
Query: 874 SIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTK 933
+PEI R N+ L M A G++DLL+F MD P + AM QL LGA+D+EG +T+
Sbjct: 521 DLPEILRNNVREAALIMMARGVDDLLTFPLMDTPKISRMEKAMVQLNILGAIDDEGAITE 580
Query: 934 LGRKMAEFPLDPPLSKMLLASVD--LGCSDEILTIIAMIQTGN-IFYRPREKQA--QADQ 988
LG+KMA P+ PL ++LLA+ C E++ II+ I G+ IF++ + ++A + ++
Sbjct: 581 LGKKMARLPVAAPLGRVLLAAASPAYDCLLEVIDIISCISGGDDIFHQLQSEEAREEVEE 640
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-WCFENFVQSRSLRRAQDVRKQLLSIM--- 1044
R + + EGD + L + + A+N WC + + R++R+A ++R+QL S+
Sbjct: 641 YRRELRRREGDLMVYLTTMQMYTAENSDRTEWCKKRKINLRTMRQALNIRRQLRSLCVSE 700
Query: 1045 ----DKYKLD----VMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1096
+K D V + + I K GF A P Y T V IHPS
Sbjct: 701 GMLTEKPPPDPQPFVPLSPEAAETITKCFMKGFCTSTAMLAPDLSYVTSQGKHVVAIHPS 760
Query: 1097 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDL 1134
S+L ++ + +++ E V T K Y ++V VI W+ ++
Sbjct: 761 SSLHGQKKEAIMFLEHVFTQKSYAKKVAVIQSVWIPEV 798
Score = 222 (83.2 bits), Expect = 1.2e-92, Sum P(2) = 1.2e-92
Identities = 58/140 (41%), Positives = 81/140 (57%)
Query: 569 GKIGCTQPRRVAAMSVAKRVAEEFGCRL------GEE-------VGYAIRFEDCTGPDTV 615
G I TQPRRVAA ++A RVA E G L G + VGY++RF+ T
Sbjct: 181 GMIAVTQPRRVAATTLAHRVAREAGTPLQPSGTSGAKPGAAEGLVGYSVRFDHNVPKGTK 240
Query: 616 IKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD------- 668
IK++T+GMLL+E+L D +L QYS +++DE HER I D+L G LKQ++ PD
Sbjct: 241 IKFLTEGMLLQELLHDPSLRQYSAVVVDEVHERGIDVDLLCGFLKQMLLS-PDKPGRGGL 299
Query: 669 -LRLIVTSATLDAEKFSGYF 687
L+++ SAT + E +F
Sbjct: 300 PLKVVAMSATANIETLENFF 319
Score = 122 (48.0 bits), Expect = 4.2e-82, Sum P(2) = 4.2e-82
Identities = 39/135 (28%), Positives = 67/135 (49%)
Query: 490 SAYDMPEWKKDAFGKALT---FGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIG 546
S +P KK A G+ + + S+ R++LPI++ + + + + N VL+++G
Sbjct: 81 SLLSVPSRKKSATGRGASSKPIQAKGDPSLLPLRKALPIWQHQGAIREHLRKNDVLILVG 140
Query: 547 ETGSGKTTQVTQYLAEAGYTTRGKIGCTQP------RRVAAMSVA---KRVAEE-FGCRL 596
ETGSGK+TQV Q+LA+ + ++ T P R+V M +RVA R+
Sbjct: 141 ETGSGKSTQVPQFLADEEWCRPRQVIMTLPNGRKEQRKVGGMIAVTQPRRVAATTLAHRV 200
Query: 597 GEEVGYAIRFEDCTG 611
E G ++ +G
Sbjct: 201 AREAGTPLQPSGTSG 215
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 467 (169.5 bits), Expect = 1.6e-92, Sum P(3) = 1.6e-92
Identities = 108/249 (43%), Positives = 158/249 (63%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK-IGCT 574
+QE+R LPI ++ +++AV ++ ++++ GETGSGKTTQV Q+L EAGY++ IG T
Sbjct: 243 MQEERLKLPILSEEQVIMEAVAEHPIVIICGETGSGKTTQVPQFLYEAGYSSDNSVIGVT 302
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
+PRRVAA+++++RVA+E V Y IR+E +T IK+MTDG+LL+EI D L
Sbjct: 303 EPRRVAAVAMSQRVAKEMNLS-PRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 361
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSGYFFNC 690
+Y V+++DEAHER+++TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 362 LKYKVVIIDEAHERSVYTDILIGLLSRIVCLREKRHLPLKLLIMSATLRVEDFTQ---NQ 418
Query: 691 NIFTIP-------GRTFPVEILYTKQ-PESDYLDASLITVLQIHLTEPEGDILLFLTGQE 742
+FT P R FPV + + K+ P DY V +IH P G IL+FLTGQ
Sbjct: 419 RLFTQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQA 478
Query: 743 EIDFACQSL 751
E+ C+ L
Sbjct: 479 EVHALCRRL 487
Score = 423 (154.0 bits), Expect = 1.6e-92, Sum P(3) = 1.6e-92
Identities = 108/268 (40%), Positives = 151/268 (56%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS L E Q+++F P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 586 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 645
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN-EMSPTSIPEIQRINL 883
G+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + + E P PEI R +
Sbjct: 646 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPP--PEITRRPV 703
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE----EGL--------- 930
L MKA+ I +++F F PPS +ALI+A E L +LGAL E +
Sbjct: 704 EDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKTERVKQLQRSRLS 763
Query: 931 --LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 988
+T+LGR MA FP+ P +KML S GC +TI+A + +F ++ A +D+
Sbjct: 764 CPITELGRTMATFPVAPRYAKMLALSRQHGCLPYTITIVAAMTVRELF-EELDRPAASDE 822
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFS 1016
+ A+ +G + + W + S
Sbjct: 823 ELARL---KGKRARVAQMKRIWAGQGAS 847
Score = 172 (65.6 bits), Expect = 1.6e-92, Sum P(3) = 1.6e-92
Identities = 37/95 (38%), Positives = 56/95 (58%)
Query: 1059 TKIRKAITAGFFFHAARKDPQE---------GYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
T +R+ +TAG H ARK E Y+T + + PV+IHPSS LF+ P++V+Y
Sbjct: 921 TYLRQIVTAGLGDHLARKVQSEDLVDDKWKNAYKTPLLDDPVFIHPSSVLFKELPEFVVY 980
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
E+V TTK YM+ V+ +D +W+ L P + + P
Sbjct: 981 QEIVETTKMYMKGVSTVDMQWIPVLLPSYCQFDKP 1015
Score = 49 (22.3 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 906 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSK 949
PP P + +E +L +D L G+K + PPLSK
Sbjct: 24 PPEPPPVRLELEDKDTLKGVDASNALVLPGKKKKKTKA-PPLSK 66
Score = 39 (18.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 850 GRTGPGKCYR----LYTESAYRNEMSPTSIPEIQRI 881
G TG GK + LY E+ Y ++ S + E +R+
Sbjct: 273 GETGSGKTTQVPQFLY-EAGYSSDNSVIGVTEPRRV 307
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 459 (166.6 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 94/210 (44%), Positives = 137/210 (65%)
Query: 767 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 826
IL +YS+LP++ Q IF+P PP RKV+++TNIAE S+TI I YVID G K ++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 827 QGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFT 886
+G + L +T IS+ SA QR+GRAGR PG+ YR+YT+ Y N M+P IPEI R +L
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQI 520
Query: 887 TLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
L +KAM IN+ L F+F + P + + + + L+ + A+D LT LG+K+ FPL+P
Sbjct: 521 YLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPI 580
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIF 976
+ +LL S++ C DEI TI+A++ +IF
Sbjct: 581 YANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 314 (115.6 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 66/152 (43%), Positives = 100/152 (65%)
Query: 576 PRRVAAMSVAKRVAEEFGCR-LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
PRRVA ++VA+RV++E +G VGY IRF++ T IK++TDG+L+REI+ D L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
+Y ++LDE HER+I TDVL G K L+++R +++I+ SAT D F+ +F N I T
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIIT 196
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIH 726
IP + + I Y ++ DY+ + + T+LQIH
Sbjct: 197 IPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 188 (71.2 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 981 EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF--VQSRSLRRAQDVRK 1038
+K + R K P+GDHLTLL ++ W+ + F N + + L++ + ++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 1039 QLLSIM-DKYKLDVMSA--GKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPVYIH 1094
QLL IM +K K+++ + +I + FF+ A+ Y LV + IH
Sbjct: 756 QLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIH 815
Query: 1095 PSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVA 1142
PSS LF +P ++ Y ++V T + Y R VT I+ WL+ F+VA
Sbjct: 816 PSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQVA 865
Score = 101 (40.6 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 521 QSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
+ LPI K K E+ + + N ++++ GETG GKTTQV Q + E + + K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 66 (28.3 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 732 GDILLFLTGQEEIDFACQSLYERMK 756
GDIL+FL GQEEI+ L E++K
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 55 (24.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 260 TRRIGNAKDVVKRDQEV-YVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNN 318
TR++ + ++ + + +K + SG K+ + DV N G ++L + +IS+D A+ +
Sbjct: 425 TRKVILSTNIAETSVTIPNIKYVIDSG-KVKIKYFDV--NRGSNVLRVTQISKDSAIQRS 481
Query: 319 PSGTRDGP 326
R+ P
Sbjct: 482 GRAGREAP 489
Score = 39 (18.8 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 527 KLKKELIQAVHDNQVLVVIGETGSG--KTTQVTQYLAEAGYTTRGKIGCTQPRRV 579
K KK+++ ++ + + E S K + Y+ GYT R K C+ R+
Sbjct: 67 KEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYV---GYTIRFKNVCSDKTRI 118
Score = 38 (18.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 197 YDNKYGDRENDDSG--DRSGRYRGNE 220
YD+ + D +ND + D G + N+
Sbjct: 671 YDDDHDDNDNDSNNNDDDMGEKKMND 696
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 459 (166.6 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 94/210 (44%), Positives = 137/210 (65%)
Query: 767 ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPK 826
IL +YS+LP++ Q IF+P PP RKV+++TNIAE S+TI I YVID G K ++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 827 QGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFT 886
+G + L +T IS+ SA QR+GRAGR PG+ YR+YT+ Y N M+P IPEI R +L
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQI 520
Query: 887 TLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
L +KAM IN+ L F+F + P + + + + L+ + A+D LT LG+K+ FPL+P
Sbjct: 521 YLELKAMNINNPLEFNFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPI 580
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIF 976
+ +LL S++ C DEI TI+A++ +IF
Sbjct: 581 YANILLCSIEFNCIDEIATIVALLNCDSIF 610
Score = 314 (115.6 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 66/152 (43%), Positives = 100/152 (65%)
Query: 576 PRRVAAMSVAKRVAEEFGCR-LGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
PRRVA ++VA+RV++E +G VGY IRF++ T IK++TDG+L+REI+ D L
Sbjct: 77 PRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKFVTDGILIREIMNDPLL 136
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
+Y ++LDE HER+I TDVL G K L+++R +++I+ SAT D F+ +F N I T
Sbjct: 137 KKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATFDINIFNQFFNNPPIIT 196
Query: 695 IPGRTFPVEILYTKQPESDYLDASLITVLQIH 726
IP + + I Y ++ DY+ + + T+LQIH
Sbjct: 197 IPHKLHKITIYYPRRNIEDYILSVVSTILQIH 228
Score = 188 (71.2 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 50/170 (29%), Positives = 83/170 (48%)
Query: 981 EKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF--VQSRSLRRAQDVRK 1038
+K + R K P+GDHLTLL ++ W+ + F N + + L++ + ++
Sbjct: 696 DKNKLINVARRKLIHPDGDHLTLLHIFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKI 755
Query: 1039 QLLSIM-DKYKLDVMSA--GKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPVYIH 1094
QLL IM +K K+++ + +I + FF+ A+ Y LV + IH
Sbjct: 756 QLLEIMKNKMKIEIPKKLHMHKWDQILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIH 815
Query: 1095 PSSALFQR--QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVA 1142
PSS LF +P ++ Y ++V T + Y R VT I+ WL+ F+VA
Sbjct: 816 PSSTLFNSYIKPTFIFYSDIVQTKRLYARIVTKIEADWLLKYVSAKFQVA 865
Score = 101 (40.6 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 521 QSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
+ LPI K K E+ + + N ++++ GETG GKTTQV Q + E + + K
Sbjct: 2 RELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEK 51
Score = 66 (28.3 bits), Expect = 8.0e-92, Sum P(5) = 8.0e-92
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 732 GDILLFLTGQEEIDFACQSLYERMK 756
GDIL+FL GQEEI+ L E++K
Sbjct: 317 GDILVFLPGQEEIEMVNIMLKEKLK 341
Score = 55 (24.4 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 260 TRRIGNAKDVVKRDQEV-YVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNN 318
TR++ + ++ + + +K + SG K+ + DV N G ++L + +IS+D A+ +
Sbjct: 425 TRKVILSTNIAETSVTIPNIKYVIDSG-KVKIKYFDV--NRGSNVLRVTQISKDSAIQRS 481
Query: 319 PSGTRDGP 326
R+ P
Sbjct: 482 GRAGREAP 489
Score = 39 (18.8 bits), Expect = 1.1e-56, Sum P(4) = 1.1e-56
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 527 KLKKELIQAVHDNQVLVVIGETGSG--KTTQVTQYLAEAGYTTRGKIGCTQPRRV 579
K KK+++ ++ + + E S K + Y+ GYT R K C+ R+
Sbjct: 67 KEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYV---GYTIRFKNVCSDKTRI 118
Score = 38 (18.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 197 YDNKYGDRENDDSG--DRSGRYRGNE 220
YD+ + D +ND + D G + N+
Sbjct: 671 YDDDHDDNDNDSNNNDDDMGEKKMND 696
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 893 (319.4 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 197/518 (38%), Positives = 307/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 123 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 182
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 183 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 242
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 243 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 302
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 303 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 362
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 363 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 422
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 423 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 482
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL--DVMSA---GKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K D G +
Sbjct: 483 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVL 542
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 543 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 602
Query: 1119 YMREVTVIDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
Y R V I +W+ DL P+ F D + +++R+ +E
Sbjct: 603 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVRE 640
Score = 361 (132.1 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 86/196 (43%), Positives = 123/196 (62%)
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF------EDCTGPDTVIKYMTDGMLLREI 628
Q R++A+ +A R EE GC +E G F + +T IKYMTDG LL+ I
Sbjct: 25 QEERLSAVCIADR--EEKGCT-SQEGGTTPTFPIQKQRKKIIQAETAIKYMTDGCLLKHI 81
Query: 629 LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKF 683
L D NL+++SVI+LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K
Sbjct: 82 LGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKL 141
Query: 684 SGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLF 737
S +F NC IF IPGR +PV ++ + E+ Y+ A + + IHL E GDIL+F
Sbjct: 142 SAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVF 201
Query: 738 LTGQEEIDFACQSLYE 753
LTGQ EI+ +C+ L++
Sbjct: 202 LTGQFEIEKSCELLFQ 217
Score = 37 (18.1 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 522 SLPIYKLKKELIQA 535
+ PI K +K++IQA
Sbjct: 52 TFPIQKQRKKIIQA 65
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 466 (169.1 bits), Expect = 2.5e-91, Sum P(4) = 2.5e-91
Identities = 111/265 (41%), Positives = 160/265 (60%)
Query: 497 WKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQV 556
W K+ A+ IQE R LP+ ++ +++AV D++ +V+ GETGSGKTTQV
Sbjct: 226 WTKEDCKPAVFIPVERLPEIQEARLRLPVLAEEQIIMEAVKDHECVVLCGETGSGKTTQV 285
Query: 557 TQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV 615
Q+L EAG+ + G I G T+PRRVAA+S++ RVA E G V Y IR+E +T
Sbjct: 286 PQFLYEAGFASSGGIIGVTEPRRVAAISMSHRVATEMNLSSGV-VSYQIRYEGNVTENTK 344
Query: 616 IKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRL 671
IK MTDG+LL+EI D L +YSVI++DEAHER+++TD+L GLL ++V K+ ++L
Sbjct: 345 IKVMTDGVLLKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKL 404
Query: 672 IVTSATLDAEKFSGY--FFNCN--IFTIPGRTFPVEILYTKQ-PESDYLDASLITVLQIH 726
I+ SATL E F+ F+ + + R F V + + K+ P DY + + +IH
Sbjct: 405 IIMSATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDYTGETFRKICKIH 464
Query: 727 LTEPEGDILLFLTGQEEIDFACQSL 751
P G IL+FLTGQ E+ C+ L
Sbjct: 465 RMLPPGGILVFLTGQAEVHSVCRRL 489
Score = 429 (156.1 bits), Expect = 2.5e-91, Sum P(4) = 2.5e-91
Identities = 105/247 (42%), Positives = 145/247 (58%)
Query: 761 NVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQ 820
++P L +LP+YS L E Q+++F P P G R VVATN+AE SLTI GI YV+D G K+
Sbjct: 577 SIP-LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKK 635
Query: 821 NVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQR 880
Y+ G+ S +T ISQASA QRAGRAGRT PG CYRLY+ + + + S S EI R
Sbjct: 636 RFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVF-GDFSLFSEAEITR 694
Query: 881 INLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE---EGLLTK---- 933
+ L MK + I +++F F PPS +ALI+A E L SLGAL++ G L++
Sbjct: 695 RPVEDLVLQMKDLNIEKVVNFPFPTPPSSEALIAAEELLISLGALEKPARHGRLSEMEKA 754
Query: 934 --------LGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 985
LGR MA FP+ P +KML GC I+TI++ + IF ++ A
Sbjct: 755 RLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVSAMTVREIF-EDYDRPAG 813
Query: 986 ADQKRAK 992
++++ K
Sbjct: 814 SEEENVK 820
Score = 157 (60.3 bits), Expect = 2.5e-91, Sum P(4) = 2.5e-91
Identities = 34/93 (36%), Positives = 54/93 (58%)
Query: 1061 IRKAITAGFFFHAARK-------DPQ--EGYRTLVENQPVYIHPSSALFQRQPDWVIYHE 1111
+R+ + AG H AR+ DP+ Y+T + + PV+IHPSSAL + P++V+Y E
Sbjct: 917 LRQIVLAGLGDHIARRVQAEELLDPKWRNAYKTPLLDDPVFIHPSSALHKTLPEFVVYQE 976
Query: 1112 LVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
++ TTK YMR V + W+ L P++ + P
Sbjct: 977 IMETTKMYMRGVCAVQDDWIPKLLPQYCHFSAP 1009
Score = 48 (22.0 bits), Expect = 1.3e-51, Sum P(4) = 1.3e-51
Identities = 16/62 (25%), Positives = 28/62 (45%)
Query: 819 KQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRL----YTESAYRNEMSPTS 874
K+NV P+ LD+ P+ + ++AG G G L + ++ + + P S
Sbjct: 519 KKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEGSDLELELGDHPDTDHEEKADP-S 577
Query: 875 IP 876
IP
Sbjct: 578 IP 579
Score = 44 (20.5 bits), Expect = 2.5e-91, Sum P(4) = 2.5e-91
Identities = 11/48 (22%), Positives = 25/48 (52%)
Query: 998 GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1045
GD + LL A + + +C EN ++ +++ + +R QL + ++
Sbjct: 845 GDLMVLLGAVGACEFAGLTPQFCEENGLRFKAMLEIRRLRGQLTNAVN 892
Score = 37 (18.1 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 633 NLSQYSVIMLDEAHE 647
NL YS + +DE E
Sbjct: 528 NLDNYSALPVDEGDE 542
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 471 (170.9 bits), Expect = 2.6e-91, Sum P(3) = 2.6e-91
Identities = 109/249 (43%), Positives = 158/249 (63%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-GCT 574
+QE+R LPI ++ +++AV ++ +++V GETGSGKTTQV Q+L EAGY++ I G T
Sbjct: 241 MQEERLKLPILAEEQAIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSEDSIIGVT 300
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
+PRRVAA+++++RVA+E V Y IR+E +T IK+MTDG+LL+EI D L
Sbjct: 301 EPRRVAAVAMSQRVAKEMNLS-HRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFLL 359
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSGYFFNC 690
+Y V+++DEAHER+++TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 360 LKYKVVIIDEAHERSVYTDILLGLLSRIVALRAKRHLPLKLLIMSATLRVEDFTQ---NQ 416
Query: 691 NIFTIP-------GRTFPVEILYTKQ-PESDYLDASLITVLQIHLTEPEGDILLFLTGQE 742
+FT P R FPV + + K+ P DY V +IH P G IL+FLTGQ
Sbjct: 417 RLFTTPPPVIKVESRQFPVTVHFNKRTPLDDYSGECFRKVCKIHRMLPAGGILVFLTGQA 476
Query: 743 EIDFACQSL 751
E+ C+ L
Sbjct: 477 EVHALCRRL 485
Score = 414 (150.8 bits), Expect = 2.6e-91, Sum P(3) = 2.6e-91
Identities = 104/268 (38%), Positives = 150/268 (55%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS L E Q+++F P P G R V+ATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 581 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVKKRYYD 640
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN-EMSPTSIPEIQRINL 883
G+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + + E P PEI R +
Sbjct: 641 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP--PEITRRPV 698
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD----EEGL--------- 930
L MKA+ I +++F F PPS +ALI+A E L +LGAL +E +
Sbjct: 699 EDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPPKQERMKKLQMSQLS 758
Query: 931 --LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 988
+T LGR M+ FP+ P +KML S GC + I+A + +F ++ A +++
Sbjct: 759 CPITALGRTMSTFPVAPRYAKMLALSQQHGCLPYTIAIVAAMTVRELF-EELDRPAASEE 817
Query: 989 KRAKFFQPEGDHLTLLAVYEAWKAKNFS 1016
+ A+ +G + + W + S
Sbjct: 818 ELAEL---KGRRTRVAQMKRTWAGQGAS 842
Score = 165 (63.1 bits), Expect = 2.6e-91, Sum P(3) = 2.6e-91
Identities = 35/95 (36%), Positives = 57/95 (60%)
Query: 1059 TKIRKAITAGFFFHAARK-------DPQ--EGYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
T +R+ + AG H AR+ DP+ Y+T + + PV+IHPSS LF+ P++V+Y
Sbjct: 916 TYLRQIMAAGLGDHLARRVQSEDLLDPKWKNAYKTPLLDDPVFIHPSSVLFRELPEFVVY 975
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
E+V TTK YM+ V+ ++ +W+ L P + + P
Sbjct: 976 QEIVETTKMYMKGVSTVEIQWIPSLLPSYCQFDAP 1010
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 197/534 (36%), Positives = 313/534 (58%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTK--QPE----SDYLDAS 718
R+ +++++V SATL+ +K S +F +C++ IPGR++PV+ ++ P S Y+ +
Sbjct: 149 RKTEMKVVVMSATLEVDKLSEFFGHCSVLHIPGRSYPVKEIFCNLLSPRDTGSSAYVTEA 208
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLG-------KNVPELIILPVY 771
+ L IHL EPEGDIL+FLTGQ EI+ AC L+++ + + +++ L+ILP+Y
Sbjct: 209 VKVTLDIHLNEPEGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLY 268
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF PAP G RK VV+TNIA SLTI+G+ YV+D GF KQ +NP+ GLD
Sbjct: 269 GSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDI 328
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QRAGRAGRT GK YRLY+ + M ++PEI+R +L LT+K
Sbjct: 329 LEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLK 388
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE--EGLLTKLGRKMAEFPLDPPLSK 949
+ ++D++ F ++D P + ++ A++QLY A+D G +T+LG + +FPL P LS
Sbjct: 389 CLSVHDVIRFPYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSC 448
Query: 950 MLLASVDLGCSDEILTIIAMIQTGNIFYRPRE--KQAQADQKRAKFFQPEG---DHLTLL 1004
++ + L C D +L I AM+ N+F RP + KQ +A+ + + G D TLL
Sbjct: 449 AVIKAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCNDFATLL 508
Query: 1005 AVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL--DVMSA---GKNFT 1059
++E KA WC + ++ R+++ A V KQL I K K D G
Sbjct: 509 NIFEQCKASKSPSAWCHKYWIHWRAVKSALSVEKQLREITSKLKQLPDFPKETFEGSRTE 568
Query: 1060 KIRKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTT 1116
+R+ + AG+F + AR+ + T+ VYIHPSS L+ ++ +W+I+H++ +T+
Sbjct: 569 LLRRCLCAGYFINVARRSAARTFCTMDGHGSIVYIHPSSTLYNQETRLEWIIFHDVTVTS 628
Query: 1117 KEYMREVTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWR 1170
K Y+R V + +W+ DL PR ++ D ++S R+E E R+ R
Sbjct: 629 KIYVRTVCPVRYEWVKDLLPRLHQI-DAYELSSVAREEVTEEEITRWKHKEDLR 681
Score = 630 (226.8 bits), Expect = 6.9e-61, P = 6.9e-61
Identities = 126/248 (50%), Positives = 178/248 (71%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 582
LPI + ++ L++AV + L+V GETGSGK+TQ+ +YL EAG G IG TQPRRVA +
Sbjct: 1 LPIRRHRRALVRAVSERPFLIVTGETGSGKSTQLPKYLYEAGLAQHGAIGVTQPRRVATI 60
Query: 583 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIML 642
SVA+RVAEE GC LG VGY +RF+DC+ +T IKYMTDG LLR IL D LS+YS+I+L
Sbjct: 61 SVAQRVAEEMGCALGSVVGYQVRFDDCSSEETAIKYMTDGCLLRHILADPLLSKYSIIIL 120
Query: 643 DEAHERTIHTDVLFGLLKQL-VKRRP-----DLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
DEAHER++ TD+LFGLLK+L ++ +P +++++V SATL+ +K S +F +C++ IP
Sbjct: 121 DEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEVDKLSEFFGHCSVLHIP 180
Query: 697 GRTFPVEILYTK--QPE----SDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR++PV+ ++ P S Y+ ++ L IHL EPEGDIL+FLTGQ EI+ AC
Sbjct: 181 GRSYPVKEIFCNLLSPRDTGSSAYVTEAVKVTLDIHLNEPEGDILVFLTGQIEIEKACDL 240
Query: 751 LYERMKGL 758
L+++ + +
Sbjct: 241 LFKKAESI 248
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 490 (177.5 bits), Expect = 3.6e-91, Sum P(4) = 3.6e-91
Identities = 112/258 (43%), Positives = 160/258 (62%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR-----GK 570
IQE R +LPI ++ +++ + N V+++ G TGSGKTTQ+ Q+L EAG+++ G
Sbjct: 391 IQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGM 450
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I TQPRRVAA+S+AKRV+EE +V Y IRF+ PDT IK+MTDG+LLRE+
Sbjct: 451 IAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSS 509
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD----------LRLIVTSATLDA 680
D L+ YS +++DEAHER+++TD+L GLL ++V+ R + L+LI+ SATL
Sbjct: 510 DFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRV 569
Query: 681 EKFSG--YFFNCN--IFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILL 736
FS F+ I I R +PV I + + + DYL + V IH P G IL+
Sbjct: 570 TDFSENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILV 629
Query: 737 FLTGQEEIDFACQSLYER 754
FLTGQ+E++ CQ L +R
Sbjct: 630 FLTGQQEVEQLCQMLRKR 647
Score = 463 (168.0 bits), Expect = 3.6e-91, Sum P(4) = 3.6e-91
Identities = 93/228 (40%), Positives = 138/228 (60%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
+ +LP+YS L +E Q ++FD +P G R +VATN+AE S+TI I YV+D G AK+ VYN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
K + + IS+A+A QRAGRAGRTGPG CYRLY+ + + + S+PEI R +
Sbjct: 762 EKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVE 821
Query: 885 FTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLD 944
L MK M I+++ +F F P L +++ L +LGA+D EG+LTKLG +M+ FPL
Sbjct: 822 SIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLS 881
Query: 945 PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
P SKML+ GC ++ +++ + +F + A K ++
Sbjct: 882 PRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSR 929
Score = 98 (39.6 bits), Expect = 3.6e-91, Sum P(4) = 3.6e-91
Identities = 38/162 (23%), Positives = 74/162 (45%)
Query: 990 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY-- 1047
R + P+ L+LL+ A+ + +C EN+++ ++L ++RKQ++ ++ +Y
Sbjct: 960 RFQAIDPDAPALSLLSAVCAYDYASDKRKFCKENYLREKALEEVTNLRKQIIGLLKRYMV 1019
Query: 1048 -------KLDVMS-AGKNFTKIRKAITAGFFFHAARKDPQE-GYRTLVEN--QPVYIHPS 1096
KL + +R+ I + + A D ++ GY TL + + V P
Sbjct: 1020 RVEKEFFKLQLKPPTSVQIKALRQFIASAYIDQVALYDKEKRGYVTLFPSGSEVVQFVPD 1079
Query: 1097 SALFQRQPDWVIY---HELVMTTKEYMREVTVIDPKWLVDLA 1135
+ ++V+Y HE + + YM +T I P+ L LA
Sbjct: 1080 RT-YNIDSEYVVYLSLHES-RSGRVYMSPLTEISPEHLARLA 1119
Score = 56 (24.8 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 23/115 (20%), Positives = 44/115 (38%)
Query: 503 GKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE 562
GK T ++ K S+ E++ LP+ L + V V ++ + +T +Y
Sbjct: 129 GKQATAKEKLKKSLLEEKLGLPLSDADSRLYKVV---DVETTTTKSSTAETNAPEKYSTR 185
Query: 563 AGYTTRGKIGCTQPR---RVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 614
+G+ G + + + K+ +G L E+ Y ED D+
Sbjct: 186 SGFGFGFSTGTNESEITPNIKVLPPKKKKNASWGKMLNEDPEYDSAEEDYLSTDS 240
Score = 42 (19.8 bits), Expect = 3.6e-91, Sum P(4) = 3.6e-91
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 7 DDGLKKLEYFSLVSKVCSE-LETHLGFGDKVLAEFIT 42
++ LKK E SL++K+ E ++T L K L + T
Sbjct: 97 ENKLKKEEVASLIAKLAEERIDTSLLSSSKNLGKQAT 133
Score = 42 (19.8 bits), Expect = 3.6e-91, Sum P(4) = 3.6e-91
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 242 QLNDFRGKEGLVHVSQIATRRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGK 301
+L D KE +S +R+ + + +EV + ++ +++ S+ +N GK
Sbjct: 71 ELKDQLLKENEGSISSKKKKRLDKYIENKLKKEEVASLIAKLAEERIDTSLLSSSKNLGK 130
Query: 302 DLLPLKKISE 311
+K+ +
Sbjct: 131 QATAKEKLKK 140
Score = 41 (19.5 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 625 LREILIDDN---LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATL 678
L++ L+ +N +S LD+ E + + + L+ +L + R D L+ +S L
Sbjct: 72 LKDQLLKENEGSISSKKKKRLDKYIENKLKKEEVASLIAKLAEERIDTSLLSSSKNL 128
Score = 41 (19.5 bits), Expect = 4.0e-44, Sum P(4) = 4.0e-44
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 248 GKEGLVHVSQIATRRIGNAKDVVKRDQEVYV--KVISVSGQKLSLSMRDVDQ 297
G++ + + Q+ +R + +K + V K +SV + L D+DQ
Sbjct: 633 GQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQ 684
Score = 37 (18.1 bits), Expect = 1.0e-43, Sum P(4) = 1.0e-43
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 347 RRPLKRMSSPEKWEAKQLIASGVLSVEDYPMYDEEGD 383
R+ R P K A+ +++ +SVE+ + E D
Sbjct: 645 RKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETED 681
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 461 (167.3 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 108/250 (43%), Positives = 159/250 (63%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-GCT 574
+QE+R LPI ++ +++AV ++ +++V GETGSGKTTQV Q+L EAG+++ I G T
Sbjct: 32 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 91
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEV-GYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
+PRRVAA+++++RVA+E L + V Y IR+E +T IK+MTDG+LL+EI D
Sbjct: 92 EPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 149
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSGYFFN 689
L +Y V+++DEAHER+++TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 150 LLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ---N 206
Query: 690 CNIFTIP-------GRTFPVEILYTKQ-PESDYLDASLITVLQIHLTEPEGDILLFLTGQ 741
+F P R FPV + + K+ P DY V +IH P G IL+FLTGQ
Sbjct: 207 PRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 266
Query: 742 EEIDFACQSL 751
E+ C+ L
Sbjct: 267 AEVHALCRRL 276
Score = 419 (152.6 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 103/241 (42%), Positives = 141/241 (58%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS L E Q+++F P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 375 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 434
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN-EMSPTSIPEIQRINL 883
G+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + + E P PEI R +
Sbjct: 435 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP--PEITRRPV 492
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD-----------EEGLL- 931
L MKA+ + +++F F PPS +AL++A E L +LGAL +E L
Sbjct: 493 EDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLS 552
Query: 932 ---TKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 988
T LGR MA FP+ P +KML S GC +TI+A + +F ++ A +D+
Sbjct: 553 CPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELDRPAASDE 611
Query: 989 K 989
+
Sbjct: 612 E 612
Score = 164 (62.8 bits), Expect = 3.6e-91, Sum P(3) = 3.6e-91
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 1059 TKIRKAITAGFFFHAARKDPQE---------GYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
T +R+ +TAG H AR+ E Y+T + + PV+IHPSS LF+ P++V+Y
Sbjct: 710 TYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVY 769
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
E+V TTK YM+ V+ ++ +W+ L P + + P
Sbjct: 770 QEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKP 804
Score = 41 (19.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 643 DEAHERTIHTDVLFGLLKQL----VKRRPDLRLIVTSATLDAEKFSGYFF 688
+ H +++ +FG +Q + RRP LI+ L+ EK + F
Sbjct: 463 EPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPF 512
Score = 39 (18.8 bits), Expect = 1.4e-46, Sum P(3) = 1.4e-46
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 627 EILIDDNLSQYSVIMLDEAHE-RTIHTDVLFGLL 659
E+L NL YSV+ E E R D G L
Sbjct: 317 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGAL 350
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 461 (167.3 bits), Expect = 1.4e-90, Sum P(3) = 1.4e-90
Identities = 108/250 (43%), Positives = 159/250 (63%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-GCT 574
+QE+R LPI ++ +++AV ++ +++V GETGSGKTTQV Q+L EAG+++ I G T
Sbjct: 245 MQEERLKLPILSEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGFSSEDSIIGVT 304
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEV-GYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
+PRRVAA+++++RVA+E L + V Y IR+E +T IK+MTDG+LL+EI D
Sbjct: 305 EPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 362
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSGYFFN 689
L +Y V+++DEAHER+++TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 363 LLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLPLKLLIMSATLRVEDFTQ---N 419
Query: 690 CNIFTIP-------GRTFPVEILYTKQ-PESDYLDASLITVLQIHLTEPEGDILLFLTGQ 741
+F P R FPV + + K+ P DY V +IH P G IL+FLTGQ
Sbjct: 420 PRLFAKPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 479
Query: 742 EEIDFACQSL 751
E+ C+ L
Sbjct: 480 AEVHALCRRL 489
Score = 419 (152.6 bits), Expect = 1.4e-90, Sum P(3) = 1.4e-90
Identities = 103/241 (42%), Positives = 141/241 (58%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS L E Q+++F P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYD 647
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN-EMSPTSIPEIQRINL 883
G+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + + E P PEI R +
Sbjct: 648 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPP--PEITRRPV 705
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD-----------EEGLL- 931
L MKA+ + +++F F PPS +AL++A E L +LGAL +E L
Sbjct: 706 EDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLS 765
Query: 932 ---TKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 988
T LGR MA FP+ P +KML S GC +TI+A + +F ++ A +D+
Sbjct: 766 CPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELF-EELDRPAASDE 824
Query: 989 K 989
+
Sbjct: 825 E 825
Score = 164 (62.8 bits), Expect = 1.4e-90, Sum P(3) = 1.4e-90
Identities = 35/95 (36%), Positives = 56/95 (58%)
Query: 1059 TKIRKAITAGFFFHAARKDPQE---------GYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
T +R+ +TAG H AR+ E Y+T + + PV+IHPSS LF+ P++V+Y
Sbjct: 923 TYLRQIVTAGLGDHLARRVQSEEMLEDKWRNAYKTPLLDDPVFIHPSSVLFKELPEFVVY 982
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
E+V TTK YM+ V+ ++ +W+ L P + + P
Sbjct: 983 QEIVETTKMYMKGVSSVEVQWIPALLPSYCQFDKP 1017
Score = 49 (22.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 906 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSK 949
PP P + +E +L +D L G+K + PPLSK
Sbjct: 24 PPEPPPVQLELEDKDTLKGVDASNALVLPGKKKKKTKA-PPLSK 66
Score = 41 (19.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 643 DEAHERTIHTDVLFGLLKQL----VKRRPDLRLIVTSATLDAEKFSGYFF 688
+ H +++ +FG +Q + RRP LI+ L+ EK + F
Sbjct: 676 EPGHCYRLYSSAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPF 725
Score = 39 (18.8 bits), Expect = 4.5e-46, Sum P(3) = 4.5e-46
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 627 EILIDDNLSQYSVIMLDEAHE-RTIHTDVLFGLL 659
E+L NL YSV+ E E R D G L
Sbjct: 530 EVLPQINLDHYSVLPAGEGDEDREAEVDEEEGAL 563
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 466 (169.1 bits), Expect = 1.6e-90, Sum P(3) = 1.6e-90
Identities = 111/263 (42%), Positives = 162/263 (61%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-GCT 574
+QE+R LPI ++ +++AV ++ +++V GETGSGKTTQV Q+L EAGY++ I G T
Sbjct: 239 MQEERLKLPILAEEQVIMEAVAEHPIVIVCGETGSGKTTQVPQFLYEAGYSSDNSIIGIT 298
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEV-GYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
+PRRVAA+++++RVA+E L + V Y IR+E +T IK+MTDG+LL+EI D
Sbjct: 299 EPRRVAAVAMSQRVAKEMN--LSQRVVSYQIRYEGNVTEETRIKFMTDGVLLKEIQKDFL 356
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSGYFFN 689
L +Y V+++DEAHER+++TD+L GLL ++V KR L+L++ SATL E F+ N
Sbjct: 357 LLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLPLKLLIMSATLRVEDFTQ---N 413
Query: 690 CNIFTIP-------GRTFPVEILYTKQ-PESDYLDASLITVLQIHLTEPEGDILLFLTGQ 741
+F P R FPV + + K+ P DY V +IH P G IL+FLTGQ
Sbjct: 414 QRLFPQPPPVIKVESRQFPVTVHFNKRTPLEDYSGECFRKVCKIHRMLPAGGILVFLTGQ 473
Query: 742 EEIDFACQSLYERMKGLGKNVPE 764
E+ C+ L + PE
Sbjct: 474 AEVHALCRRLRRAFPHTRRRPPE 496
Score = 420 (152.9 bits), Expect = 1.6e-90, Sum P(3) = 1.6e-90
Identities = 104/241 (43%), Positives = 141/241 (58%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS L E Q+++F P P G R VVATN+AE SLTI GI YV+D G K+ Y+
Sbjct: 582 LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYD 641
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN-EMSPTSIPEIQRINL 883
G+ S +T +SQASA QRAGRAGRT PG CYRLY+ + + + E P PEI R +
Sbjct: 642 RVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPP--PEITRRPV 699
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE----EGL--------- 930
L MKA+ I +++F F PPS +ALI+A E L +LGAL E +
Sbjct: 700 EDLILQMKALNIEKVINFPFPTPPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLG 759
Query: 931 --LTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 988
+T LGR MA FP+ P +KML S GC +TI+A + +F ++ A +D+
Sbjct: 760 CPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRELF-EELDRPAASDE 818
Query: 989 K 989
+
Sbjct: 819 E 819
Score = 157 (60.3 bits), Expect = 1.6e-90, Sum P(3) = 1.6e-90
Identities = 33/95 (34%), Positives = 55/95 (57%)
Query: 1059 TKIRKAITAGFFFHAARKDPQE---------GYRTLVENQPVYIHPSSALFQRQPDWVIY 1109
T +R+ + AG H AR+ E Y+T + + PV+IHPSS LF+ P++V+Y
Sbjct: 917 TYLRQIVAAGLGDHLARRVQSEDLLDDKWKNAYKTPLLDDPVFIHPSSVLFKELPEFVVY 976
Query: 1110 HELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADP 1144
E++ TTK YM+ V+ ++ +W+ L P + + P
Sbjct: 977 QEIMETTKMYMKGVSAVEVQWIPVLLPSYCQFDKP 1011
Score = 46 (21.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 927 EEGLLTKLGRKMAEFPLDPPLSK-----ML--LASVDLGCSD-EILTIIAMIQTGNIFYR 978
E+ LTK RKM + L+ K ML L+ V + ++ + + + TG+ Y
Sbjct: 68 EKKPLTKKERKMLQKILEQKEKKSQRAEMLQKLSEVQVSEAEMRLFYTTSKLGTGDRMYH 127
Query: 979 PREKQAQAD-QKRAKFFQPEGDH 1000
REK + + Q++ K G H
Sbjct: 128 TREKSDKIEAQRQEKISSLSGAH 150
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 906 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSK 949
P P + +E +L +D L G+K + P PP SK
Sbjct: 24 PAEPPPVRLELEDKDTLKGIDASNALVLPGKKKKK-PKAPPPSK 66
Score = 41 (19.5 bits), Expect = 8.2e-51, Sum P(3) = 8.2e-51
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 986 ADQKRAKFFQP--EGDHLTLLA 1005
A +K+A+ FQP EG L ++A
Sbjct: 592 APEKQAQVFQPPPEGTRLCVVA 613
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 505 (182.8 bits), Expect = 8.3e-90, Sum P(5) = 8.3e-90
Identities = 120/292 (41%), Positives = 178/292 (60%)
Query: 499 KDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 558
+ AF A+T RS IQ R +LP+ ++ +++A+H+N ++VV G TGSGKTTQ+ Q
Sbjct: 337 RKAFHVAVT---RSP-EIQSARLALPVVSEEQRIMEAIHNNNIVVVCGATGSGKTTQIPQ 392
Query: 559 YLAEAGY-----TTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 613
+L EAGY T G IG TQPRRVAA+S++KRVAEE G ++VGY IRFE D
Sbjct: 393 FLFEAGYGSPDSPTPGMIGITQPRRVAAVSMSKRVAEELGDH-SQKVGYQIRFEGTVNKD 451
Query: 614 TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD----- 668
T +K+MTDG+LLRE+ D L +YS I++DEAHER+++TD+L G+L +++K R +
Sbjct: 452 TAVKFMTDGVLLREVAQDLALRKYSAIVVDEAHERSVNTDILIGMLSRIIKLRAEMAQED 511
Query: 669 -----LRLIVTSATLDAEKFSGYFFNCNIFTIP-------GRTFPVEILYTKQPESDYLD 716
L+L++ SATL E + N N+F P GR +PV + + ++ DY++
Sbjct: 512 PTVKPLKLVIMSATLRIEDLTE---NKNLFATPPPVLEVEGRQYPVTLHFARKTHHDYVE 568
Query: 717 ASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGK-NVPELII 767
+ + + H P G +L+FLTGQ EI + L + G+ N P++ I
Sbjct: 569 EAFRKISRGHKKLPPGGMLVFLTGQNEITQLSKRLKLQFNGVTSVNAPQVRI 620
Score = 449 (163.1 bits), Expect = 8.3e-90, Sum P(5) = 8.3e-90
Identities = 97/243 (39%), Positives = 146/243 (60%)
Query: 742 EEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAE 801
EE +F + E G G + + +LP+YS LP++ Q R+F+P P G R VV+ATN+AE
Sbjct: 657 EEEEFKIE---EEEAGTGPS--RMHVLPLYSLLPTKEQLRVFEPPPDGSRLVVLATNVAE 711
Query: 802 ASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLY 861
SLTI GI YV D G +K+ Y+ G+ S + IS+ASA QR GRAGRTGPG C+RLY
Sbjct: 712 TSLTIPGIRYVFDSGRSKERKYDQLTGVQSFEVGWISKASANQREGRAGRTGPGHCWRLY 771
Query: 862 TESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYS 921
+ + Y ++ ++PE+ R +L L +K+M + +++F F PP +L+ + + L
Sbjct: 772 SSAVYERDLDEFALPELLRTSLEGVVLQLKSMNLQHVVNFPFPTPPERDSLVKSEKLLKY 831
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPRE 981
+ A+ EEG +T++G M+ FPL P S++LL C +T++A + IF P E
Sbjct: 832 ISAVSEEGRVTQVGYTMSIFPLSPRFSRILLLGHQHDCLHYTVTLVAALSAAEIFI-P-E 889
Query: 982 KQA 984
QA
Sbjct: 890 NQA 892
Score = 72 (30.4 bits), Expect = 8.3e-90, Sum P(5) = 8.3e-90
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 982 KQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL 1041
+Q A K F + D + +L V + A + WC +FV+ + L+ AQ +R+Q++
Sbjct: 921 RQFNAVNKNFCFLDDKSDAIKMLQVLGEF-AHEPTEKWCESHFVRFKVLKEAQKLRQQIV 979
Query: 1042 SIMDKYKLDVMS-AGKNF 1058
++ K ++ S A NF
Sbjct: 980 QLL---KTNIPSFANINF 994
Score = 57 (25.1 bits), Expect = 8.3e-90, Sum P(5) = 8.3e-90
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 1087 ENQPVYIHPSSALFQRQ----PDWVIYHEL 1112
E + VYIHPSS L PD++IY+ L
Sbjct: 1062 EEKLVYIHPSSPLAHLSTSECPDYIIYNYL 1091
Score = 46 (21.3 bits), Expect = 6.4e-42, Sum P(4) = 6.4e-42
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 658 LLKQLVKRRPDLRLIVTSATLDAEKFS-----GYFFNCNIFTIPGRTFPVEILYTKQPES 712
LL +L + D L +S TL + + N +PG E+LY K+ E
Sbjct: 85 LLAKLAANKVDTSLFSSSKTLGQTRQTKRQALSQALNEERAGLPGNATREELLYEKREER 144
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLT 739
+ D + + +P+ D+L+ T
Sbjct: 145 NVSDQEEDSESEAQ-AQPKPDVLVSST 170
Score = 37 (18.1 bits), Expect = 8.3e-90, Sum P(5) = 8.3e-90
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 339 EEDGVVPSRRP-LKRMSSPEKWEA 361
E+DG +P RR K + ++ EA
Sbjct: 273 EDDGDLPQRRSAFKEWAQAQRNEA 296
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 451 (163.8 bits), Expect = 1.6e-89, Sum P(5) = 1.6e-89
Identities = 95/215 (44%), Positives = 130/215 (60%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L +LP+YS LP+ Q R+F P G R VVVATN+AE SLTI I YV+D G KQ YN
Sbjct: 846 LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIPNIKYVVDTGRVKQRYYN 905
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
G+ S + S+ASA QRAGRAGRTGPG CYR+Y+ + + + S PEI I +
Sbjct: 906 KDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFNDHFQQFSKPEILMIPID 965
Query: 885 FTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGL-LTKLGRKMAEFPL 943
L MK+MGI + F F PP +L A+ L +LGAL+ + +T+LG KM++FP+
Sbjct: 966 GMILQMKSMGIQKITGFPFPTPPDESSLKLALRTLINLGALEVKTFSITELGMKMSQFPV 1025
Query: 944 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYR 978
P SKMLL + C I+ I++++ + F +
Sbjct: 1026 SPRHSKMLLLGQEHNCLPYIIAIVSILTVKDPFLK 1060
Score = 383 (139.9 bits), Expect = 1.6e-89, Sum P(5) = 1.6e-89
Identities = 83/166 (50%), Positives = 110/166 (66%)
Query: 513 KLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR---- 568
K I R +LPI + +++ + DN V+++ GETGSGKTTQV Q+L E+G+ R
Sbjct: 395 KPEIDAVRDNLPIMLEEHSIVEKIKDNDVVIICGETGSGKTTQVPQFLYESGFGHRESGD 454
Query: 569 --GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT-VIKYMTDGMLL 625
G IG TQPRRVAA+S AKRVAEE G+EVGY IR++ IK+MTDG+L+
Sbjct: 455 FPGIIGVTQPRRVAAVSTAKRVAEELNVEFGKEVGYQIRYDKKLDSSVNKIKFMTDGILM 514
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRL 671
RE+ D LSQYS I++DEAHER ++TD+L GLL ++V R L L
Sbjct: 515 REVQTDFLLSQYSSILIDEAHERNLNTDILIGLLSRIVPLRKKLYL 560
Score = 143 (55.4 bits), Expect = 1.6e-89, Sum P(5) = 1.6e-89
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 669 LRLIVTSATLDAEKFSGY--FFNCN--IFTIPGRTFPVEILYTKQPES-DYLDASLITVL 723
L+L+V SATL E F+ F+ + IP R FPV I + K+ E +Y+D V+
Sbjct: 580 LKLVVMSATLRVEDFTKNKTLFSRPPPVINIPTRQFPVTIHFNKKTELVNYIDECYKKVV 639
Query: 724 QIHLTEPEGDILLFLTGQEEIDFACQSL 751
+IH P G IL+F+TG++EI++ C L
Sbjct: 640 KIHKNLPSGGILVFVTGKQEIEYLCSKL 667
Score = 93 (37.8 bits), Expect = 1.6e-89, Sum P(5) = 1.6e-89
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 1092 YIHPSSAL--FQRQPDWVIYHELVMTTKEYMREVTVIDPKWL 1131
+IHP+S L Q ++VIY +++ T++ YM+ VT I+P WL
Sbjct: 1259 FIHPTSNLGGVNTQAEYVIYCDIIETSRPYMKLVTEINPSWL 1300
Score = 62 (26.9 bits), Expect = 1.6e-89, Sum P(5) = 1.6e-89
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 980 REKQAQA-DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRA 1033
R+K Q K+ E D L++L V A+ + P +C +NF+ ++S+
Sbjct: 1099 RQKHLQRLRNSMRKWLHKESDLLSILKVVGAYDYQIRKSPKDIDHFCSQNFLNTKSMSEI 1158
Query: 1034 QDVRKQLLSIMD 1045
+R QL I++
Sbjct: 1159 HKLRHQLTEIVN 1170
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
Identities = 197/518 (38%), Positives = 307/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL--DVMSA---GKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K D G +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVL 619
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 1119 YMREVTVIDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
Y R V I +W+ DL P+ F D + +++R+ +E
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVRE 717
Score = 636 (228.9 bits), Expect = 1.5e-61, P = 1.5e-61
Identities = 128/243 (52%), Positives = 175/243 (72%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+ PI K +K++IQAV DN L+V G TGSGKTTQ+ +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 697 GRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR +PV ++ + E+ Y+ A + + IHL E GDIL+FLTGQ EI+ +C+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 751 LYE 753
L++
Sbjct: 292 LFQ 294
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 196/518 (37%), Positives = 306/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSAGKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K G +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 1119 YMREVTVIDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
Y R V I +W+ DL P+ F D + +++R+ +E
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVRE 717
Score = 639 (230.0 bits), Expect = 7.1e-62, P = 7.1e-62
Identities = 133/264 (50%), Positives = 181/264 (68%)
Query: 505 ALTFGQRSKLSIQEQR----QSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYL 560
A+T R + Q + PI K +K+LIQAV DN L+V G TGSGKTTQ+ +YL
Sbjct: 31 AVTIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYL 90
Query: 561 AEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 620
EAG++ G IG TQPR+VAA+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMT
Sbjct: 91 YEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMT 150
Query: 621 DGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTS 675
DG LL+ IL D NL+++SVI+LDEAHERT+ TD+LFGLLK+L + R+ L+++V S
Sbjct: 151 DGCLLKHILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMS 210
Query: 676 ATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTE 729
AT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A + + IHL E
Sbjct: 211 ATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNE 270
Query: 730 PEGDILLFLTGQEEIDFACQSLYE 753
GDIL+FLTGQ EI+ +C+ L++
Sbjct: 271 MAGDILVFLTGQFEIEKSCELLFQ 294
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 196/518 (37%), Positives = 306/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSAGKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K G +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 1119 YMREVTVIDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
Y R V I +W+ DL P+ F D + +++R+ +E
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVRE 717
Score = 638 (229.6 bits), Expect = 9.2e-62, P = 9.2e-62
Identities = 129/243 (53%), Positives = 175/243 (72%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+ PI K +K+LIQAV DN L+V G TGSGKTTQ+ +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 697 GRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR +PV ++ + E+ Y+ A + + IHL E GDIL+FLTGQ EI+ +C+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 751 LYE 753
L++
Sbjct: 292 LFQ 294
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 892 (319.1 bits), Expect = 2.2e-89, P = 2.2e-89
Identities = 196/518 (37%), Positives = 306/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 278 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 337
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 338 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 397
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 398 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 457
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 458 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 517
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 518 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 577
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 578 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 637
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSAGKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K G +
Sbjct: 638 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 697
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 698 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 757
Query: 1119 YMREVTVIDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
Y R V I +W+ DL P+ F D + +++R+ +E
Sbjct: 758 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVRE 795
Score = 638 (229.6 bits), Expect = 9.2e-62, P = 9.2e-62
Identities = 129/243 (53%), Positives = 175/243 (72%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+ PI K +K+LIQAV DN L+V G TGSGKTTQ+ +YL EAG++ G IG TQPR+VAA
Sbjct: 130 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 189
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 190 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 249
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S +F NC IF IP
Sbjct: 250 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 309
Query: 697 GRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR +PV ++ + E+ Y+ A + + IHL E GDIL+FLTGQ EI+ +C+
Sbjct: 310 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 369
Query: 751 LYE 753
L++
Sbjct: 370 LFQ 372
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 195/518 (37%), Positives = 307/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+QK + G D TL +
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVI 559
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSAGKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K G +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 1119 YMREVTVIDPKWLVDLAPRFFKVA--DPTKMSKRKRQE 1154
Y R V I +W+ DL P+ ++ D + +++R+ ++
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRD 717
Score = 638 (229.6 bits), Expect = 9.2e-62, P = 9.2e-62
Identities = 129/243 (53%), Positives = 175/243 (72%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+ PI K +K+LIQAV DN L+V G TGSGKTTQ+ +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 697 GRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR +PV ++ + E+ Y+ A + + IHL E GDIL+FLTGQ EI+ +C+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 751 LYE 753
L++
Sbjct: 292 LFQ 294
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 534 (193.0 bits), Expect = 4.9e-89, Sum P(2) = 4.9e-89
Identities = 148/489 (30%), Positives = 255/489 (52%)
Query: 664 KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVL 723
K+R L L+A F GY F RT + L P+S + +LI +
Sbjct: 522 KKRKSLISSAVEDALEAADFKGYNF---------RTR--DSLSCWSPDS--IGFNLIENV 568
Query: 724 QIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 781
H+ + E G +L+F+TG ++I+ + ++ E LG + ++++L + ++ S Q
Sbjct: 569 LCHIVKGERPGAVLVFMTGWDDIN-SLKNQLEAHSLLG-DPNKVLLLACHGSMASSEQRL 626
Query: 782 IFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 841
IFD P G RK+V+ATN+AE S+TI+ + YVID G AK+ Y+ L+ + IS+A+
Sbjct: 627 IFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAA 686
Query: 842 AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF 901
A+QR GRAGR PG+CY LY Y + PE+ R L L +K++G+ + F
Sbjct: 687 ARQRRGRAGRVMPGECYHLYPRCVYE-AFADYQQPELLRTPLQSLCLQIKSLGLGSISEF 745
Query: 902 --DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGC 959
+ PP ++ +A+E L +GALD++ LT LG+ ++ P++P L KML+ C
Sbjct: 746 LSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNC 805
Query: 960 SDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWK--AKNFS 1016
D ++T++A + + F P +K+ A+ R+KF + DHLTL+ Y WK + S
Sbjct: 806 LDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHS 865
Query: 1017 G-PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL-DVMSAGKNFTK----IRKAITAGFF 1070
G +C++NF+ S++L+ +RKQ +++ + L D + + +R I AG F
Sbjct: 866 GYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGCSKLSHDEHLVRAIICAGMF 925
Query: 1071 ---FHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP----DWVIYHELVMTTKEYMREV 1123
K+ +T+ + Q V ++ SS++ P W+++++ V ++R+
Sbjct: 926 PGVCSVVNKEKSITLKTMEDGQ-VLLY-SSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDS 983
Query: 1124 TVIDPKWLV 1132
T + L+
Sbjct: 984 TAVSDSVLL 992
Score = 443 (161.0 bits), Expect = 4.9e-89, Sum P(2) = 4.9e-89
Identities = 97/203 (47%), Positives = 135/203 (66%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY-TTRG---KIGCTQ 575
R++LP YK K L++A+ NQV+VV GETG GKTTQ+ QY+ E+ RG I CTQ
Sbjct: 296 RKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQ 355
Query: 576 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLS 635
PRR++A+SV++RVA E G ++GE VGY +R E G DT + + T G+LLR +L+D +L
Sbjct: 356 PRRISAISVSERVAAERGEQIGESVGYKVRLEGMRGRDTRLLFCTTGVLLRRLLVDRSLK 415
Query: 636 QYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTI 695
+ +++DE HER ++ D L +LK L+ RRPDL+LI+ SATL+AE FS YF I
Sbjct: 416 GVTHVVVDEIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHI 475
Query: 696 PGRTFPVEILYTKQPESDYLDAS 718
PG T+PV + + DYL+ S
Sbjct: 476 PGFTYPVRAHFLE----DYLETS 494
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 195/518 (37%), Positives = 307/518 (59%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 500 IRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSAGKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K G +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IHPSSAL +++ +W+I+HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKV 679
Query: 1119 YMREVTVIDPKWLVDLAPRFFKVA--DPTKMSKRKRQE 1154
Y R V I +W+ DL P+ ++ D + +++R+ +E
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRE 717
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 130/243 (53%), Positives = 175/243 (72%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+ PI K +K+LIQAV DN L+V G TGSGKTTQ+ +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NLS++SVI+
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 697 GRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR +PV ++ + E+ Y+ A + + IHL E GDIL+FLTGQ EI+ +C+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 751 LYE 753
L++
Sbjct: 292 LFQ 294
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 489 (177.2 bits), Expect = 1.7e-87, Sum P(5) = 1.7e-87
Identities = 102/238 (42%), Positives = 150/238 (63%)
Query: 740 GQEEIDFACQSLYERM-KGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATN 798
G++E D + E + +G N P L +LP+YS LP++ Q R+F P G R +VATN
Sbjct: 704 GEDEEDEEEEGFEEVLTEGQTANDP-LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATN 762
Query: 799 IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 858
+AE SLTI G+ YV+D G +K+ YN G+ S + +S+ASA QR+GRAGRTGPG CY
Sbjct: 763 VAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCY 822
Query: 859 RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 918
RLY+ + + ++ S PEI R+ + L MK+M I+++++F F PP AL A++
Sbjct: 823 RLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQL 882
Query: 919 LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF 976
L LGALD + ++T+ G+KM+ FPL P SKMLL S + C I+ I++ + G+ F
Sbjct: 883 LQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPF 940
Score = 479 (173.7 bits), Expect = 1.7e-87, Sum P(5) = 1.7e-87
Identities = 110/250 (44%), Positives = 156/250 (62%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR------G 569
IQ+ R LP++ + ++++A+H N V+++ GETGSGKTTQV Q+L EAG+ G
Sbjct: 384 IQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPG 443
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
+G TQPRRVAA+S+A+RVA E G G +VGY IRF+ DT +K+MTDG+LLRE++
Sbjct: 444 MVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMM 502
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR-------P----DLRLIVTSATL 678
D L++YS I++DEAHER I+TD+L G+L + V+ R P L+LI+ SATL
Sbjct: 503 HDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL 562
Query: 679 DAEKFSGY--FFNCN--IFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDI 734
FS F + + R FPV I + ++ +Y D + +IH P G I
Sbjct: 563 RVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAI 622
Query: 735 LLFLTGQEEI 744
L+FLTGQ+EI
Sbjct: 623 LVFLTGQQEI 632
Score = 51 (23.0 bits), Expect = 1.7e-87, Sum P(5) = 1.7e-87
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1086 VENQPVYIHPSSALF---QRQPDWVIYHELVMTTKEYMREVTVID 1127
+E+ VYIHP+S L + P +++Y+ L + R T+ D
Sbjct: 1128 IEDCFVYIHPTSILNNLGEMPPKYMLYYSLHLGGNNKTRMNTLCD 1172
Score = 43 (20.2 bits), Expect = 1.7e-87, Sum P(5) = 1.7e-87
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 976 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEA--WKAKNFSGPWCFENFVQSRSLRRA 1033
FY+ R + ++ D KF D LL+V A + K + +NF++ + +
Sbjct: 987 FYKSRSQFSKLD----KF----SDVFRLLSVVSAMDYVPKEQKEIFMKKNFLRGKLMEEI 1038
Query: 1034 QDVRKQLLSIM 1044
+RKQL+ I+
Sbjct: 1039 VKLRKQLMYII 1049
Score = 41 (19.5 bits), Expect = 1.7e-87, Sum P(5) = 1.7e-87
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 339 EEDGVVPSRRPLKRMSSPE 357
EED + PS PL+ + S +
Sbjct: 283 EEDKMHPSENPLEEVESAD 301
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 192/518 (37%), Positives = 303/518 (58%)
Query: 665 RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVE-----ILYTKQPESD-YLDAS 718
R+ L+++V SAT++ K S +F NC IF IPGR +PV ++ + E+ Y+ A
Sbjct: 200 RKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAI 259
Query: 719 LITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPE-----LIILPVY 771
+ + IHL E GDIL+FLTGQ EI+ +C+ L++ + + + V + L+ILP Y
Sbjct: 260 VKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCY 319
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
++ ++ Q RIF P PPG RK V++TNI+ SLTIDGI YV+D GF KQ +NP+ GLD
Sbjct: 320 GSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDI 379
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PIS++ A QR+GRAGRT GKC+R+Y++ + M IPEI+R +L LT+K
Sbjct: 380 LEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLK 439
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
+ I+D++ F ++DPP+ + ++ A++QLY A+D G +T+LG M EFPL P L+ +
Sbjct: 440 CLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAV 499
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRP--REKQAQADQKRAKFFQPEG---DHLTLLAV 1006
+ + L C D +L I AM+ N+F RP E Q +A+Q+ + G D TL +
Sbjct: 500 IKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVI 559
Query: 1007 YEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV-----MSAGKNFTKI 1061
+E K+ WC ++++ R L A V QL ++ K K G +
Sbjct: 560 FEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVL 619
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV-ENQPVYIHPSSALFQRQP--DWVIYHELVMTTKE 1118
R+ + AG+F + AR+ + T+ PV+IH + L +++ +W+I+HE+++TTK
Sbjct: 620 RRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHQNCKLHEQETKLEWIIFHEVLVTTKV 679
Query: 1119 YMREVTVIDPKWLVDLAPRF--FKVADPTKMSKRKRQE 1154
Y R V I +W+ DL P+ F D + +++R+ +E
Sbjct: 680 YARIVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVRE 717
Score = 638 (229.6 bits), Expect = 9.2e-62, P = 9.2e-62
Identities = 129/243 (53%), Positives = 175/243 (72%)
Query: 522 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAA 581
+ PI K +K+LIQAV DN L+V G TGSGKTTQ+ +YL EAG++ G IG TQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
+SVA+RVAEE C LG +VGY +RF+DC+ +T IKYMTDG LL+ IL D NL+++SVI+
Sbjct: 112 ISVAQRVAEEMKCALGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 642 LDEAHERTIHTDVLFGLLKQLVK-----RRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 696
LDEAHERT+ TD+LFGLLK+L + R+ L+++V SAT++ K S +F NC IF IP
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 697 GRTFPVE-----ILYTKQPESD-YLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
GR +PV ++ + E+ Y+ A + + IHL E GDIL+FLTGQ EI+ +C+
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 751 LYE 753
L++
Sbjct: 292 LFQ 294
>MGI|MGI:2136388 [details] [associations]
symbol:Dqx1 "DEAQ RNA-dependent ATPase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=ISA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 MGI:MGI:2136388 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 GO:GO:0016887 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AF318278 EMBL:BC048936 EMBL:BC075680
IPI:IPI00125675 IPI:IPI00844713 RefSeq:NP_291084.1
UniGene:Mm.140332 ProteinModelPortal:Q924H9 SMR:Q924H9
PhosphoSite:Q924H9 PRIDE:Q924H9 Ensembl:ENSMUST00000077502
GeneID:93838 KEGG:mmu:93838 UCSC:uc009cmc.1 UCSC:uc009cmd.1
InParanoid:Q924H9 NextBio:351693 Bgee:Q924H9 CleanEx:MM_DQX1
Genevestigator:Q924H9 Uniprot:Q924H9
Length = 718
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 215/642 (33%), Positives = 349/642 (54%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQ--VLVVIGETGSGKTTQVTQYLAE----AGYTTRGKI 571
EQR++LPI+ + ++ + + V++V G+ GSGK+TQ+ Q+ AE G+ T G++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-GQV 95
Query: 572 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 631
TQP +AAMS+A RVA+E LG E+GY+I EDCTGP+T++++ D + L+E+
Sbjct: 96 TVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAST 155
Query: 632 DNLSQYSVIMLDEAHERTIHTDVLFGLLKQL-VKRRP-DLRLIVTSATLDAEKFSGYFFN 689
+SV++LDEA ER++ +D+L GLL+ ++ P D R++V + KF ++ N
Sbjct: 156 RGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGN 215
Query: 690 CNIFTIPGRTFPVEIL-YTKQPESDYLDASLITVLQI-HLTEPEGDILLFLTGQEEIDFA 747
I +P L Y +D ++A+ VL++ E GD+L++L +EEI
Sbjct: 216 SPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLC 275
Query: 748 CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTID 807
C+SL M L P +LP++ +Q+ +++ RK+VV +A+ S ++
Sbjct: 276 CESLSGEMGTLAVPGPPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLP 334
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
I +VID G ++VYNP+ +S V+ PIS+ A+ R RA PG C RLY++S
Sbjct: 335 SIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLE 394
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 927
E P P++ NL L + I + F+D P+P+AL+ A+E L L AL++
Sbjct: 395 LEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALND 454
Query: 928 EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 987
+G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ F RP +A
Sbjct: 455 DGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEAA 514
Query: 988 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1047
+RA +GDH +L+ VYEA+ WC + SL +A+ +R +L+ +M +
Sbjct: 515 LRRA-LEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARKLRAELVELMQRI 573
Query: 1048 KLDV----MSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPVYIHPSSALFQR 1102
+L + + +N ++KA+ +G+F AR G Y L + P + R
Sbjct: 574 ELPLSQPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCSYRNR 633
Query: 1103 Q-----PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFF 1139
+ P WV+YH ++ + V+ I P+ LV+LAP +F
Sbjct: 634 RTPAQPPTWVLYHSFSISKDNCLCIVSEIQPEMLVELAPPYF 675
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 520 (188.1 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 139/439 (31%), Positives = 231/439 (52%)
Query: 713 DYLDASLITVLQIHLTEPEGD--ILLFLTGQEEIDFACQSLYERMKGLGKNVPELI-ILP 769
D + +LI L ++ E EG IL+FLTG ++I + L ++ + N P+L+ +L
Sbjct: 478 DCIGFNLIEFLLCNICENEGPGGILIFLTGWDDISSLKEKL--QIHPIFGN-PDLVMLLA 534
Query: 770 VYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGL 829
+ ++ + Q IF+ G RK+V+ATNIAE S+TI+ + +VID G AK+ Y+
Sbjct: 535 CHGSMETFEQRLIFEEPASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNT 594
Query: 830 DSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLT 889
L+ + IS+ SA+QR GRAGR PG+CY LY + Y + + +PEI R L L
Sbjct: 595 PCLLPSWISKVSAQQRRGRAGRVRPGQCYHLYPKCVY-DAFAEYQLPEILRTPLHSLCLQ 653
Query: 890 MKAMGINDLLSFDFMDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+K++ + + F SP+ L A+ L +GALDE LT LGR +++ P++P L
Sbjct: 654 IKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKL 713
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
KML+ LGC D ILT+ A + + F P++K+ A+ +++F + DHL L+ Y
Sbjct: 714 GKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAKSQFSRDHSDHLALVRAY 773
Query: 1008 EAWK-AKNFSG--PWCFENFVQSRSLRRAQDVRKQLLSIM-DKYKLD-----VMSAGKNF 1058
E WK A+ S +C++NF+ +SLR +RK+ S++ D +D S G +
Sbjct: 774 EGWKKAEEESAVYDYCWKNFLSIQSLRAIDSLRKEFFSLLKDTGLIDGNPSICNSEGNDA 833
Query: 1059 TKIRKAITAGFF---FHAARKDPQEGYRTLVENQPV-YIHPSSALFQRQP-DWVIYHELV 1113
R I G + + +T+ + Q + Y + +A + P W++++E +
Sbjct: 834 NLTRAVICYGMYPGICSVVHNERSFSLKTMEDGQVLLYSNSENARETKIPYPWLVFNEKI 893
Query: 1114 MTTKEYMREVTVIDPKWLV 1132
++R+ T L+
Sbjct: 894 KVNSVFLRDSTACSDSTLI 912
Score = 442 (160.7 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 95/208 (45%), Positives = 135/208 (64%)
Query: 499 KDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 558
+ + +A GQR + + R SLP +K + ++ A+ NQV+V+ GETG GKTTQ+ Q
Sbjct: 200 RQQYWQASVEGQR----MLDSRTSLPAFKQRHSVLTAISQNQVIVISGETGCGKTTQIPQ 255
Query: 559 YLAEAGY-TTRG---KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 614
++ E+ RG I CTQPRR++AMSV++RVA E G +LGE VGY +R E G DT
Sbjct: 256 FILESEIEANRGAFSSIICTQPRRISAMSVSERVAYERGEQLGESVGYKVRLEGVKGRDT 315
Query: 615 VIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVT 674
+ + T G+LLR +L+D NL + +++DE HER ++ D L +LK L+ RR +L+LI+
Sbjct: 316 RLLFCTTGILLRRLLVDRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRSELKLILM 375
Query: 675 SATLDAEKFSGYFFNCNIFTIPGRTFPV 702
SATLDAE FS YF + IPG T+PV
Sbjct: 376 SATLDAELFSSYFGGAGVIYIPGFTYPV 403
Score = 38 (18.4 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 196 RYDNKYGDRENDDSGDRSGRY 216
RY + Y DR ++D + G +
Sbjct: 32 RYVSAYDDRVSEDRQPQEGTF 52
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 508 (183.9 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 135/402 (33%), Positives = 213/402 (52%)
Query: 715 LDASLITVLQIHLTEPEGD--ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
+D L+ H+ EG IL+FLTG +EI + + M + + ++LP++
Sbjct: 485 IDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKI--NMNNFLGDSSKFLVLPLHG 542
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
++P+ Q IFD PP KRK+V+ATNIAE+S+TID + YV+D G AK+ Y+ + L
Sbjct: 543 SMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACL 602
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 892
+ + IS+ASA QR GRAGR G CYRLY + Y + +PEI R L L +K+
Sbjct: 603 LPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIY-DAFPQYQLPEIIRTPLQELCLHIKS 661
Query: 893 MGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKM 950
+ + + SF + PP A+ +A+E L ++GAL++ LT LGR + P+DP + KM
Sbjct: 662 LQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKM 721
Query: 951 LLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG--DHLTLLAVYE 1008
LL C + LTI A + + F P ++ +AD+ + ++F + DH+ LL YE
Sbjct: 722 LLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAK-RYFAGDSCSDHIALLKAYE 780
Query: 1009 AWKAKNFSG---PWCFENFVQSRSLRRAQDVRKQLLSIM------DKYKLDVMSA-GKNF 1058
++ G +C++NF+ +LR +D+R Q L ++ DK K + + +
Sbjct: 781 GYRDAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDM 840
Query: 1059 TKIRKAITAGFFFHAARKDPQEGYRTLV---ENQPVYIHPSS 1097
I + AG + + + + G RT E V IHP S
Sbjct: 841 EMISAVLCAGLYPNVVQCK-RRGKRTAFYTKELGKVDIHPGS 881
Score = 439 (159.6 bits), Expect = 3.5e-86, Sum P(2) = 3.5e-86
Identities = 103/229 (44%), Positives = 143/229 (62%)
Query: 490 SAYDMPE-WKKDAFGKALTFGQRSKLSIQEQ-------RQSLPIYKLKKELIQAVHDNQV 541
SA +P+ +K+ F AL Q KL E R+ LP +K+K+E + +V NQV
Sbjct: 188 SASKLPDSLEKEKFSFALKERQE-KLKATESVKALKAFREKLPAFKMKEEFLNSVSQNQV 246
Query: 542 LVVIGETGSGKTTQVTQYLAEAGYTT-RG---KIGCTQPRRVAAMSVAKRVAEEFGCRLG 597
LVV GETG GKTTQ+ Q++ E ++ RG I CTQPRR++A+SVA R++ E G +G
Sbjct: 247 LVVSGETGCGKTTQLPQFILEEEISSLRGADCNIICTQPRRISAISVASRISAERGESIG 306
Query: 598 EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFG 657
E VGY IR E T + + T G+LLR ++ D NL+ S +++DE HER ++ D L
Sbjct: 307 ESVGYQIRLESKRSDQTRLLFCTTGVLLRRLIEDPNLTNVSHLLVDEIHERGMNEDFLLI 366
Query: 658 LLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILY 706
+L+ L+ RRPDLRLI+ SAT++A+ FS YF N IPG TFPV L+
Sbjct: 367 ILRDLLPRRPDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELF 415
Score = 243 (90.6 bits), Expect = 8.2e-58, Sum P(2) = 8.2e-58
Identities = 89/313 (28%), Positives = 144/313 (46%)
Query: 834 ITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSI-PEIQRINLGFTTLTMKA 892
I+ S + RAGR + Y A+ P I +Q + L +L + +
Sbjct: 607 ISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIKSLQVGS 666
Query: 893 MGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLL 952
+G L+ + PP A+ +A+E L ++GAL++ LT LGR + P+DP + KMLL
Sbjct: 667 IG--SFLA-KALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLL 723
Query: 953 ASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWK 1011
C + LTI A + + F P ++ +AD+ + F DH+ LL YE ++
Sbjct: 724 IGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYFAGDSCSDHIALLKAYEGYR 783
Query: 1012 AKNFSG---PWCFENFVQSRSLRRAQDVRKQLLSIM------DKYKLDVMSA-GKNFTKI 1061
G +C++NF+ +LR +D+R Q L ++ DK K + + + I
Sbjct: 784 DAKRGGNEKDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIGFVDKSKPNAYNQYSYDMEMI 843
Query: 1062 RKAITAGFFFHAARKDPQEGYRTLV---ENQPVYIHPSSA-----LFQRQPDWVIYHELV 1113
+ AG + + + + G RT E V IHP S LF P +++Y E V
Sbjct: 844 SAVLCAGLYPNVVQCK-RRGKRTAFYTKELGKVDIHPGSVNARVNLFSL-P-YLVYSEKV 900
Query: 1114 MTTKEYMREVTVI 1126
TT Y+R+ T I
Sbjct: 901 KTTSVYIRDSTNI 913
Score = 39 (18.8 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 18/87 (20%), Positives = 32/87 (36%)
Query: 509 GQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGET--GSGKTTQVTQYLAEAG-- 564
G SK + S+P ++E+ N+ +V+ S T Y+ + G
Sbjct: 530 GDSSKFLVLPLHGSMPTVN-QREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKA 588
Query: 565 ----YTTRGKIGCTQPRRVAAMSVAKR 587
Y K+ C P ++ S +R
Sbjct: 589 KETSYDALNKVACLLPSWISKASAHQR 615
>UNIPROTKB|Q3ZBE0 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0004386
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
HOGENOM:HOG000175261 GeneTree:ENSGT00650000093246
HOVERGEN:HBG039428 EMBL:BC103411 IPI:IPI00704154
RefSeq:NP_001030399.1 UniGene:Bt.49583 PRIDE:Q3ZBE0
Ensembl:ENSBTAT00000033191 GeneID:517947 KEGG:bta:517947 CTD:165545
InParanoid:Q3ZBE0 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3
NextBio:20872543 Uniprot:Q3ZBE0
Length = 719
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 230/704 (32%), Positives = 371/704 (52%)
Query: 480 LAQELRGVGLSAYDMPEWKKDAFGK--ALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVH 537
+A +L G+ + PE + A L F R + EQR+SLP++ + ++ +
Sbjct: 1 MASQLLGLEEESGPNPEESELAVNPFDGLPFSSRY-YKLLEQRRSLPVWAARFIFLEHLE 59
Query: 538 DNQ--VLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIGCTQPRRVAAMSVAKRVAEEF 592
+ V++V GE G GK+TQ+ Q+ AE A +G + TQP +AA+S+A RVA+E
Sbjct: 60 SSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQKGWVTVTQPYPLAALSLALRVADEM 119
Query: 593 GCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHT 652
LG EVGY+I EDCTGPDT++++ D +LL+E+ V++LDEA ER++ +
Sbjct: 120 DLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVAS 179
Query: 653 DVLFGLLK--QLVKRRPDLRLIV-TSATLDAEKFSGYFFNCNIFTIPGRT--FPVEILYT 707
D+L GLL+ +L DLR++V T +L+ K ++ +P +T P +
Sbjct: 180 DLLQGLLRDARLGSLPGDLRVVVVTDPSLEP-KLQDFWGGPPTVCVPRKTGSCPTPVYRD 238
Query: 708 KQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELII 767
P +D +DA+ VL+ E GD+L++L +EEI C+SL +++ L P +
Sbjct: 239 SLP-ADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRV 297
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
LP++ +Q+ +++ G RKVVV +A+ S ++ I +VID G ++VY+P+
Sbjct: 298 LPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQI 356
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
+S V+ P+S+ A+ R RA PG C LY +S E P + NL
Sbjct: 357 RAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLM 416
Query: 888 LTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
L +K I + F+D P+P+AL+ A+E L L ALD++G L+ LG ++EFPL P L
Sbjct: 417 LLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPEL 476
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
+K LLAS + C DE+LT+ AM+ F RP +A +RA +GDH +L+ VY
Sbjct: 477 AKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPVCAEEAALRRA-LEHVDGDHSSLIQVY 535
Query: 1008 EAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV----MSAGKNFTKIRK 1063
EA+ WC + +L +A+ +R +LL +M + +L + + +N ++K
Sbjct: 536 EAFIQSGADKAWCQARGLNWAALCQARKLRGELLELMQRIELPLSQPAFGSERNRRDLQK 595
Query: 1064 AITAGFFFHAARKDPQEG-YRTLVENQPVYIHPSSALFQRQ-----PDWVIYHELVMTTK 1117
A+ +G+F AR G Y L + P+ R+ P WV+YH ++
Sbjct: 596 ALVSGYFLKVARDTDGTGNYLLLTHKHVAQLSPNCCYRSRRAPARPPLWVLYHSFSISKD 655
Query: 1118 EYMREVTVIDPKWLVDLAPRFFKVADPTKMSK----RKRQERIE 1157
+ V+ I P+ LV+LAP +F P S+ + R+ER +
Sbjct: 656 NCLSIVSEIQPQMLVELAPPYFLSNLPPSESRDFLNQLREERTD 699
>RGD|1591766 [details] [associations]
symbol:Dqx1 "DEAQ box RNA-dependent ATPase 1" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194 SMART:SM00847
RGD:1591766 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH473957
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00650000093246
CTD:165545 KO:K14433 OMA:CGQAVQA OrthoDB:EOG4548Z3 IPI:IPI00194915
RefSeq:NP_001102877.1 UniGene:Rn.154059 Ensembl:ENSRNOT00000011002
GeneID:680434 KEGG:rno:680434 UCSC:RGD:1591766 NextBio:718702
Uniprot:D4A474
Length = 717
Score = 861 (308.1 bits), Expect = 4.3e-86, P = 4.3e-86
Identities = 224/667 (33%), Positives = 359/667 (53%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQ--VLVVIGETGSGKTTQVTQYLAE----AGYTTRGKI 571
EQR++LPI+ + ++ + + V++V GE GSGK+TQ+ Q+ AE G+ T G++
Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQT-GQV 95
Query: 572 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILID 631
TQP +AAMS+A RVA+E LG E+GY+I EDCTGP+T++++ D + L+E+
Sbjct: 96 TVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVAST 155
Query: 632 DNLSQYSVIMLDEAHERTIHTDVLFGLLKQL-VKRRP-DLRL-IVTSATLDAEKFSGYFF 688
+SV++LDEA ER++ +D+L GLL+ ++ P D R+ IVT + L+ KF ++
Sbjct: 156 RGPGAWSVLVLDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVIVTDSALEP-KFQAFWG 214
Query: 689 NCNIFTIPGRTFPVE---ILYTKQPESDYLDASLITVLQI-HLTEPEGDILLFLTGQEEI 744
N +P P E + Y +D ++A+ VL++ E GD+L++L +EEI
Sbjct: 215 NSPTVHVPRE--PGENPTLTYKDTVPADLVEAACQAVLELCQREEAPGDVLVYLPSEEEI 272
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
C+SL M L P +LP++ +Q+ +++ RK+VV +A+ S
Sbjct: 273 SLCCESLSREMGMLAVPGPLPRVLPLHPGCGQAIQT-VYEDTDVSVRKIVVTHWLADFSF 331
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
++ I +VID G ++VYNP+ +S V+ IS+ A+ R RA PG C RLY++S
Sbjct: 332 SLPFIQHVIDSGLELRSVYNPRIRAESQVLRRISKCQAEARLLRARGFPPGTCLRLYSKS 391
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
E P P++ NL L +K I + F+D P+P+AL+ A+E L L A
Sbjct: 392 TLDLEAPPLPHPKVCEENLSSLVLLLKRKQIAEPGECHFLDRPAPEALMQALEDLDYLAA 451
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA 984
LD++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ F RP
Sbjct: 452 LDDDGDLSDLGIILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLCAG 511
Query: 985 QADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+A +R +GDH +L+ VYEA+ WC + +L +A+ +R +LL +M
Sbjct: 512 EAALRRG-LEHADGDHSSLIQVYEAFVQSGADETWCQARGLSWEALCQARKLRAELLELM 570
Query: 1045 DKYKLDV----MSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPVYIHPSSAL 1099
+ +L + + +N ++KA+ +G+F AR G Y L + P
Sbjct: 571 QRIELPLSLPAFGSEQNRRDLQKALLSGYFLKVARDTDGTGNYLLLTHKHVAQLSPYCVY 630
Query: 1100 FQRQ-----PDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTKMSK---RK 1151
R+ P WV+YH ++ + V+ I P+ LV+LAP +F P S+ +
Sbjct: 631 RNRRTPAQPPTWVLYHRFSISKDNCLCTVSEIQPEMLVELAPPYFLSNLPPSESRDLLNQ 690
Query: 1152 RQERIEP 1158
+E EP
Sbjct: 691 LREGTEP 697
>UNIPROTKB|E2QXW1 [details] [associations]
symbol:DQX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 CTD:165545 KO:K14433 OMA:CGQAVQA
EMBL:AAEX03010965 RefSeq:XP_532994.2 Ensembl:ENSCAFT00000013395
GeneID:475784 KEGG:cfa:475784 NextBio:20851558 Uniprot:E2QXW1
Length = 719
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 228/682 (33%), Positives = 355/682 (52%)
Query: 506 LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQ--VLVVIGETGSGKTTQVTQYLAEA 563
L F R + EQR++LPI+ + ++ + + V++V GE GSGK+TQ+ Q+ AE
Sbjct: 29 LPFSSRY-YELLEQRRALPIWATRFIFLEQLESSPSGVVLVSGEPGSGKSTQIPQWCAEF 87
Query: 564 GYTT---RGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 620
G++ TQP +AA+S+A RVA+E LG+EVGY+I EDCTGPDT++++
Sbjct: 88 ALARGFKEGRVTVTQPYPLAALSLAVRVADEMDLTLGQEVGYSIPQEDCTGPDTLLRFCW 147
Query: 621 DGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQL-VKRRP-DLRLIVTSATL 678
D +LL+E+ + V++LDEA ER++ +D+L GLL+ + P D R++V +
Sbjct: 148 DRLLLQEVASTRGTGAWGVLVLDEAQERSVASDLLQGLLRNAKLGNLPGDSRVVVVTDPA 207
Query: 679 DAEKFSGYFFNCNIFTIP-GR-TFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILL 736
K ++ N I +P G P + Y +D ++A+ VL++ E GD+L+
Sbjct: 208 LEPKLQAFWGNPTIVHVPRGPGACPTPV-YRDIVPTDRVEAACQAVLELCAKEAPGDVLV 266
Query: 737 FLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVA 796
+L +EEI C+SL ++ L P +LP++ +Q+ ++ G RKVVV
Sbjct: 267 YLPSEEEILQCCESLSREVEPLALRGPPPRVLPLHPGHGPAVQAA-YEDIDLGARKVVVT 325
Query: 797 TNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGK 856
+A+ S ++ I +VID G ++VYNP+ +S V+ PIS+ A+ R RA PG
Sbjct: 326 HWLADFSFSLPSIRHVIDSGLELRSVYNPQIRAESQVLRPISRCQAEARRLRARGIPPGS 385
Query: 857 CYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAM 916
C LY ES E P + NL L +K I + F+D P+P+AL+ A+
Sbjct: 386 CICLYPESFLELEAPLLPPPRVCEENLSPMVLLLKRRQIAEPGECHFLDRPAPEALMQAL 445
Query: 917 EQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF 976
E L L ALD++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+ F
Sbjct: 446 EDLDYLAALDDDGNLSDLGVILSEFPLPPELAKALLASCEFDCVDEMLTLAAMLTAAPGF 505
Query: 977 YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1036
P +A +RA +GDH +L+ VYEA+ WC + +L +AQ +
Sbjct: 506 THPPLSAEEAALRRA-LEHADGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAQKL 564
Query: 1037 RKQLLSIMDKYKLDV----MSAGKNFTKIRKAITAGFFFHAARKDPQEG-YRTLVENQPV 1091
R +LL +M + +L + + +N ++KA+ +G+F AR G Y L
Sbjct: 565 RGELLELMQQIELPLSQPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHVA 624
Query: 1092 YIHP-----SSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTK 1146
+ P S R P WV+YH ++ + V+ I P+ LV+LAP +F P
Sbjct: 625 QLSPYCCYRSRRSPARSPPWVLYHSFSISKDNCLSIVSEIQPQMLVELAPPYFLSNLPPS 684
Query: 1147 MSKRKRQERIEPLYDRYHEPNS 1168
S+ E E D E S
Sbjct: 685 ESRDLLNELREETTDSSIESES 706
>FB|FBgn0001330 [details] [associations]
symbol:kz "kurz" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0022008 EMBL:AE014298
GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AL009195 GeneTree:ENSGT00550000074985 KO:K14780
OMA:AKLQPRT EMBL:X64418 PIR:T13424 RefSeq:NP_476591.1 UniGene:Dm.33
ProteinModelPortal:O46072 SMR:O46072 STRING:O46072 PaxDb:O46072
PRIDE:O46072 EnsemblMetazoa:FBtr0070419 GeneID:31205
KEGG:dme:Dmel_CG3228 UCSC:CG3228-RA CTD:31205 FlyBase:FBgn0001330
InParanoid:O46072 OrthoDB:EOG4SN03P PhylomeDB:O46072
GenomeRNAi:31205 NextBio:772445 Bgee:O46072 GermOnline:CG3228
Uniprot:O46072
Length = 1192
Score = 503 (182.1 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 114/242 (47%), Positives = 159/242 (65%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQ 575
+Q R LPI ++++++ +++N +++V GETGSGKTTQ+ Q+L EAGY IG T+
Sbjct: 253 VQNARLRLPILAEEQQVMETINENPIVIVAGETGSGKTTQLPQFLYEAGYAQHKMIGVTE 312
Query: 576 PRRVAAMSVAKRVAEEFGCRLGE-EVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNL 634
PRRVAA++++KRVA E L E EV Y IRFE P T IK+MTDG+LL+EI D L
Sbjct: 313 PRRVAAIAMSKRVAHEMN--LPESEVSYLIRFEGNVTPATRIKFMTDGVLLKEIETDFLL 370
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLV----KRRPDLRLIVTSATLDAEKFSGYFFNC 690
S+YSVI+LDEAHER+++TD+L GLL ++V KR L+LI+ SATL F+ N
Sbjct: 371 SKYSVIILDEAHERSVYTDILVGLLSRIVPLRHKRGQPLKLIIMSATLRVSDFTE---NT 427
Query: 691 NIFTIP-------GRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEE 743
+F IP R FPV I + K+ DY+ + L+IH PEG IL+F+TGQ+E
Sbjct: 428 RLFKIPPPLLKVEARQFPVTIHFQKRTPDDYVAEAYRKTLKIHNKLPEGGILIFVTGQQE 487
Query: 744 ID 745
++
Sbjct: 488 VN 489
Score = 369 (135.0 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 89/206 (43%), Positives = 119/206 (57%)
Query: 757 GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 816
G G+ P L +LP+YS L SE Q+RIF P P G R VV+TN+AE SLTI I YV+D G
Sbjct: 610 GSGQRQP-LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCG 668
Query: 817 FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIP 876
K +Y+ G+ + V+T S+ASA QRAGRAGR G CYRLY+ + Y + S P
Sbjct: 669 RQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQP 728
Query: 877 EIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL--------DEE 928
+IQ+ + L M+ MGI+ ++ F F PP L +A +L LGAL D
Sbjct: 729 DIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLP 788
Query: 929 GLLTKLGRKMAEFPLDPPLSKMLLAS 954
+T+LG ++ FP+ P KML S
Sbjct: 789 PAVTRLGHVISRFPVAPRFGKMLALS 814
Score = 118 (46.6 bits), Expect = 3.7e-85, Sum P(3) = 3.7e-85
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 1046 KYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1105
++ ++ AG RK A R+ + Y +P ++H SS L Q+ P+
Sbjct: 944 RFLRQILLAGMGDRVARKVPLADIADKEERRRLKYAYNCADMEEPAFLHVSSVLRQKAPE 1003
Query: 1106 WVIYHELVM-----TTKEYMREVTVIDPKWLVDLAP 1136
WVIY E +TK ++R +T I+P+WL+ P
Sbjct: 1004 WVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039
Score = 38 (18.4 bits), Expect = 5.8e-43, Sum P(2) = 5.8e-43
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 1101 QRQPDWVI-YHELVMTTKE 1118
QRQP WV+ + L+ + K+
Sbjct: 613 QRQPLWVLPLYSLLSSEKQ 631
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 481 (174.4 bits), Expect = 3.9e-85, Sum P(3) = 3.9e-85
Identities = 104/254 (40%), Positives = 150/254 (59%)
Query: 742 EEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAE 801
EE + + E + V L +LP+YS LP++ Q ++F+ PPG R +VATN+AE
Sbjct: 748 EENEEEEEGFEESIDSKESEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAE 807
Query: 802 ASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLY 861
SLTI GI YV+D G +K+ YN + G+ S + +S+ASA QRAGRAGRTGPG CYRLY
Sbjct: 808 TSLTIPGIRYVVDCGRSKERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLY 867
Query: 862 TESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYS 921
+ + + + S+PEI R+ L+MK+MGI+ + +F F PP +L A E L
Sbjct: 868 SSAVFEDFFPQFSVPEILRMPFESIVLSMKSMGIDQIANFPFPTPPDRFSLKKAEELLVI 927
Query: 922 LGALD-EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPR 980
LGALD E+ +T LG+KM+ FPL P +K+L+ C I+ I++ + G+ F
Sbjct: 928 LGALDKEQKQITDLGKKMSLFPLSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGEN 987
Query: 981 EKQAQA-DQKRAKF 993
E D+ R +F
Sbjct: 988 ELVGNMNDEARREF 1001
Score = 470 (170.5 bits), Expect = 3.9e-85, Sum P(3) = 3.9e-85
Identities = 114/256 (44%), Positives = 157/256 (61%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR------ 568
SIQ+QR LP++ + +++AV+ + +++ GETGSGKTTQV Q+L EAG+
Sbjct: 435 SIQQQRALLPVFAEEHRIMEAVYHHDCIILCGETGSGKTTQVPQFLYEAGFGNLLHDLYP 494
Query: 569 GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT---GPD--TVIKYMTDGM 623
G IG TQPRRVAA+S+A+RV E G G VGY IRF+ G + T +K+MTDG+
Sbjct: 495 GMIGVTQPRRVAAVSMAERVGSELGDH-GHRVGYQIRFDTTIKNEGKENGTALKFMTDGV 553
Query: 624 LLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR-------PDL----RLI 672
LLRE++ D L++YS I++DEAHER I+TD+L G+L ++VK R P L +LI
Sbjct: 554 LLREMMTDFLLAKYSAIIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLI 613
Query: 673 VTSATLDAEKFSGY--FFNCN--IFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLT 728
+ SATL FS F I + R +PV I + K+ DYL+ + +IH
Sbjct: 614 IMSATLRVSDFSENPALFKTPPPIINVQARQYPVSIHFNKKTNYDYLEEAFKKTCKIHRK 673
Query: 729 EPEGDILLFLTGQEEI 744
PEG IL+FLTGQ EI
Sbjct: 674 LPEGGILIFLTGQNEI 689
Score = 47 (21.6 bits), Expect = 7.2e-41, Sum P(3) = 7.2e-41
Identities = 22/98 (22%), Positives = 40/98 (40%)
Query: 473 PETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKEL 532
P T E LA++ R + + Y KK+ +A + Q +R+ I L ++L
Sbjct: 62 PVTEEERLARK-RALEQNLYSENS-KKEKMSRAKKKRLDKYIDHQLKREEKKI--LLEKL 117
Query: 533 IQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
+ D + E G GK T+ + + +G+
Sbjct: 118 AETKMDTSNFAALKELGKGKQTKKEEMIEALELERQGR 155
Score = 42 (19.8 bits), Expect = 3.9e-85, Sum P(3) = 3.9e-85
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 1086 VENQP-VYIHPSSALFQ--RQPD-WVIYHELVMTTKEYMRE 1122
+E+ P VY+HP+S + + + P +++Y L +TK + E
Sbjct: 1138 IEDGPFVYLHPNSLIAESGQIPSSYLVYQSL--STKGNISE 1176
Score = 37 (18.1 bits), Expect = 1.3e-38, Sum P(3) = 1.3e-38
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 907 PSP-QALISAMEQLYSLGALDE 927
P P + +SAM+Q+ + G +D+
Sbjct: 1086 PIPNKKQVSAMKQMIASGFIDQ 1107
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 510 (184.6 bits), Expect = 9.3e-85, Sum P(2) = 9.3e-85
Identities = 136/442 (30%), Positives = 236/442 (53%)
Query: 713 DYLDASLITVLQIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKG---LGKNVPELII 767
D + +LI + H+ E G +L+FLTG ++I +SL +++K LG + +++
Sbjct: 519 DCIGFNLIEAVLCHICRKERPGAVLVFLTGWDDI----RSLSDQIKAHPLLG-DPNRVLL 573
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
L + ++ + Q IF+ APP RK+V+ATN+AEAS+TI+ + +V+D G AK+ Y+
Sbjct: 574 LMCHGSMATAEQRLIFERAPPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALN 633
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
L+ + ISQASA+QR GRAGR PG+CY LY + Y + + +PE+ R L
Sbjct: 634 NTPCLLPSWISQASARQRRGRAGRLFPGECYHLYPKCVY-DAFAEYQLPELLRTPLNSLC 692
Query: 888 LTMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDP 945
L +K++ + + F + P A+ +A+ L +GALDE+ LT LG+ ++ P+DP
Sbjct: 693 LQIKSLQVESIAEFLSAALQAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDP 752
Query: 946 PLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE-GDHLTLL 1004
L KML+ C D ILTI++ + + F P++K+ A + +F + DH+ L+
Sbjct: 753 KLGKMLIMGAIFRCFDPILTIVSGLSVRDPFLLPQDKKDLALSAKLRFSAKDYSDHMALV 812
Query: 1005 AVYEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQLLSIMDKYKL---DVMSAGK-- 1056
+E WK G +C+ NF+ +++L+ +RKQ I+ + L D+ K
Sbjct: 813 RAFEGWKDAEREGSAYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVHDDLALNNKLS 872
Query: 1057 -NFTKIRKAITAGFFFHAA---RKDPQEGYRTLVENQ-PVYIHPSSALFQRQP-DWVIYH 1110
N + +R I +G F A ++ ++T+ + Q +Y + ++ F P W+++
Sbjct: 873 HNQSLVRAVICSGLFPGIASVVHRETSMSFKTMDDGQVSLYANSVNSRFPTIPYPWLVFG 932
Query: 1111 ELVMTTKEYMREVTVIDPKWLV 1132
E V +R+ T + L+
Sbjct: 933 EKVKVNAVLIRDSTGVPDSSLI 954
Score = 427 (155.4 bits), Expect = 9.3e-85, Sum P(2) = 9.3e-85
Identities = 92/190 (48%), Positives = 130/190 (68%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-RG---KIGC 573
E R++LP +K K+ L+QA+ NQV+VV GETG GKTTQ+ QY+ E+ + RG I C
Sbjct: 255 EFRKTLPSFKDKERLLQAIARNQVIVVSGETGCGKTTQLPQYILESEIESGRGAFCNIIC 314
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
TQPRR++AM+V++RV+ E G LGE VG+ +R E G +T + + T G+LLR +L D N
Sbjct: 315 TQPRRISAMAVSERVSAERGEPLGETVGFKVRLEGMRGKNTHLLFCTSGILLRRLLSDRN 374
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
L+ + + +DE HER ++ D L +LK+L+ RRPDLRL++ SATL+AE FS Y+
Sbjct: 375 LNGVTHVFVDEIHERGMNEDFLIIVLKELLPRRPDLRLVLMSATLNAELFSNYYGGAPTI 434
Query: 694 TIPGRTFPVE 703
IPG T PV+
Sbjct: 435 HIPGFTHPVK 444
Score = 40 (19.1 bits), Expect = 7.3e-35, Sum P(2) = 7.3e-35
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 873 TSIPEIQRINLGFTTLTMKAMGINDLLS--FDF-MDPPSPQALISAMEQLYSL 922
T +P+ I G + T +G +L DF MDP ++ + E+L L
Sbjct: 946 TGVPDSSLILFGGSLSTGVQVGHLKMLDGYIDFFMDPNLAESYVKLKEELDKL 998
>UNIPROTKB|Q8TE96 [details] [associations]
symbol:DQX1 "ATP-dependent RNA helicase DQX1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF04408 PROSITE:PS51194
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
EMBL:AC005041 HOVERGEN:HBG039428 CTD:165545 KO:K14433 OMA:CGQAVQA
OrthoDB:EOG4548Z3 EMBL:AK074337 EMBL:AK092420 EMBL:BC075018
IPI:IPI00385794 IPI:IPI00843897 IPI:IPI00844595 RefSeq:NP_598376.2
UniGene:Hs.191705 ProteinModelPortal:Q8TE96 SMR:Q8TE96
STRING:Q8TE96 PhosphoSite:Q8TE96 DMDM:145558898 PaxDb:Q8TE96
PRIDE:Q8TE96 Ensembl:ENST00000393951 Ensembl:ENST00000404568
GeneID:165545 KEGG:hsa:165545 UCSC:uc010yrw.2 GeneCards:GC02M074745
H-InvDB:HIX0200286 HGNC:HGNC:20410 HPA:HPA039158 neXtProt:NX_Q8TE96
PharmGKB:PA134916600 InParanoid:Q8TE96 GenomeRNAi:165545
NextBio:88548 ArrayExpress:Q8TE96 Bgee:Q8TE96 CleanEx:HS_DQX1
Genevestigator:Q8TE96 Uniprot:Q8TE96
Length = 717
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 222/654 (33%), Positives = 351/654 (53%)
Query: 506 LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQ--VLVVIGETGSGKTTQVTQYLAEA 563
L F R + +QRQ+LPI+ + ++ + N V++V GE GSGK+TQ+ Q+ AE
Sbjct: 29 LPFSSRY-YELLKQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEF 87
Query: 564 GYTT---RGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMT 620
+G++ TQP +AA S+A RVA+E LG EVGY+I EDCTGP+T++++
Sbjct: 88 ALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCW 147
Query: 621 DGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLK--QLVKRRPDLRLIVTSATL 678
D +LL+E+ + V++LDEA ER++ +D L GLL+ +L K DLR++V +
Sbjct: 148 DRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPA 207
Query: 679 DAEKFSGYFFNCNIFTIPGRTF--PVEILYTKQPESDYLDASLITVLQIHLTEPEGDILL 736
K ++ N I IP P I + P D ++A+ VL++ E GD+L+
Sbjct: 208 LEPKLRAFWGNPPIVHIPREPGERPSPIYWDTIPP-DRVEAACQAVLELCRKELPGDVLV 266
Query: 737 FLTGQEEIDFACQSLYERMKGLG-KNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVV 795
FL +EEI C+SL ++ L + +P + LP++ +Q+ +++ RKVVV
Sbjct: 267 FLPSEEEISLCCESLSREVESLLLQGLPPRV-LPLHPDCGRAVQA-VYEDMDA--RKVVV 322
Query: 796 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPG 855
+A+ S ++ I +VID G ++VYNP+ + V+ PIS+ A+ R RA PG
Sbjct: 323 THWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPG 382
Query: 856 KCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISA 915
C LY +S E P P + NL L +K I + F+D P+P+AL+ A
Sbjct: 383 SCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQA 442
Query: 916 MEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNI 975
+E L L ALD++G L+ LG ++EFPL P L+K LLAS + C DE+LT+ AM+
Sbjct: 443 LEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPG 502
Query: 976 FYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQD 1035
F RP +A +RA +GDH +L+ VYEA+ WC + +L +A
Sbjct: 503 FTRPPLSAEEAALRRA-LEHTDGDHSSLIQVYEAFIQSGADEAWCQARGLNWAALCQAHK 561
Query: 1036 VRKQLLSIMDKYKLDV----MSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1091
+R +LL +M + +L + + +N ++KA+ +G+F AR G L+ ++ V
Sbjct: 562 LRGELLELMQRIELPLSLPAFGSEQNRRDLQKALVSGYFLKVARDTDGTGNYLLLTHKHV 621
Query: 1092 YIHPSSALFQ------RQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFF 1139
S ++ R P WV+YH ++ + V+ I P+ LV+LAP +F
Sbjct: 622 AQLSSYCCYRSRRAPARPPPWVLYHNFTISKDNCLSIVSEIQPQMLVELAPPYF 675
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 494 (179.0 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 118/339 (34%), Positives = 193/339 (56%)
Query: 711 ESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
+ + +D +LI L I L E +G IL+FL G + I L ++ + K+ + II+
Sbjct: 468 DDEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MFKS-DKFIII 524
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ +
Sbjct: 525 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 584
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
+ ++ +S+A+AKQR GRAGR PG CY LY S + + +PEI R L L
Sbjct: 585 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-SLRASLLDDYQLPEILRTPLEELCL 643
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + + + F MDPPS +A++ +++ L L ALD++ LT LG +A P++P
Sbjct: 644 QIKILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPH 703
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLA 1005
+ KM+L C D +LTI A + + F P K+ AD +R + + + DHLT++
Sbjct: 704 IGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKDTKSDHLTVVN 763
Query: 1006 VYEAW-KAKN----FSGPWCFENFVQSRSLRRAQDVRKQ 1039
++ W KAK + +C+E F+ S +L+ +++ Q
Sbjct: 764 AFKGWEKAKQRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 802
Score = 424 (154.3 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 93/197 (47%), Positives = 128/197 (64%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ + ++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 200 IEMQRFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 258
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 259 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 318
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D +LS S I+LDE HER + +DVL ++K L+ RPDL++++ SATL+AEKFS
Sbjct: 319 QWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYRPDLKVVLMSATLNAEKFSE 378
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 379 YFGNCPMIHIPGFTFPV 395
Score = 61 (26.5 bits), Expect = 1.8e-84, Sum P(3) = 1.8e-84
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V IHP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 869 VAIHPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 913
Score = 37 (18.1 bits), Expect = 5.7e-44, Sum P(3) = 5.7e-44
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 658 LLKQLVKRRPDLRLI 672
LL+ L K++ DLR I
Sbjct: 186 LLEDLQKKKTDLRYI 200
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 462 (167.7 bits), Expect = 2.5e-84, Sum P(2) = 2.5e-84
Identities = 92/209 (44%), Positives = 137/209 (65%)
Query: 502 FGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA 561
FG+ FG+ +KL Q +R +LPI + ++Q + ++QV+VV G+TG GK+TQV QYL
Sbjct: 143 FGQKQAFGRLAKL--QRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLL 200
Query: 562 EAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 621
AG++ + CTQPRR+A +S+AKRV E + G +VGY IRFE T I ++T
Sbjct: 201 AAGFS---HVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTV 257
Query: 622 GMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAE 681
G+LLR+I + +L QY V+++DE HER +H D L G+L++L+ RPDL++I+ SAT++
Sbjct: 258 GLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTRPDLKVILMSATINIS 317
Query: 682 KFSGYFFNCNIFTIPGRTFPVEILYTKQP 710
FS YF N + +PGR FP+ + P
Sbjct: 318 LFSSYFSNAPVVQVPGRLFPITVFDVAPP 346
Score = 422 (153.6 bits), Expect = 2.5e-84, Sum P(2) = 2.5e-84
Identities = 89/204 (43%), Positives = 126/204 (61%)
Query: 782 IFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 841
+FD APPG RK +++TNIAE S+TIDGI +V+D G K+ Y+P+ L L ISQAS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 842 AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF 901
A+QR GRAGRTGPG C+RLY ES Y + +P +PEI+R+ L L MK+M + D +F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 902 DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 961
F++PP P +L +A+ L GALD LT +G +A+ P+D + KML+ +
Sbjct: 459 PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVE 518
Query: 962 EILTIIAMIQTGNIFYRPREKQAQ 985
+LTI A + + F R + +
Sbjct: 519 PVLTIAAALSVQSPFTRSAQSSPE 542
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 493 (178.6 bits), Expect = 1.1e-83, Sum P(3) = 1.1e-83
Identities = 119/348 (34%), Positives = 196/348 (56%)
Query: 702 VEILYTKQPESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLG 759
V++L + + D +D +LI L I L E +G IL+FL G + I L ++ +
Sbjct: 452 VDVL--QMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MF 507
Query: 760 KNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAK 819
K+ + +I+P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + YVID G K
Sbjct: 508 KS-DKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIK 566
Query: 820 QNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQ 879
+ ++ + + ++ +S+A+AKQR GRAGR PG CY LY + + +PEI
Sbjct: 567 ETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEIL 625
Query: 880 RINLGFTTLTMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRK 937
R L L +K + + + F MDPPS +A++ +++ L L ALD++ LT LG
Sbjct: 626 RTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVH 685
Query: 938 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFF-QP 996
+A P++P + KM+L C D +LTI A + + F P K+ AD +R + +
Sbjct: 686 LARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKET 745
Query: 997 EGDHLTLLAVYEAWK-AKN----FSGPWCFENFVQSRSLRRAQDVRKQ 1039
DHLT++ +E W+ AK + +C+E F+ S +L+ +++ Q
Sbjct: 746 RSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 793
Score = 417 (151.9 bits), Expect = 1.1e-83, Sum P(3) = 1.1e-83
Identities = 93/197 (47%), Positives = 127/197 (64%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ ++++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 191 IEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 249
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 250 CRIVCTQPRRISAISVAERVATERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 309
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AEKFS
Sbjct: 310 QWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSE 369
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 370 YFGNCPMIHIPGFTFPV 386
Score = 61 (26.5 bits), Expect = 1.1e-83, Sum P(3) = 1.1e-83
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V IHP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 860 VSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 904
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 492 (178.3 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 117/339 (34%), Positives = 190/339 (56%)
Query: 711 ESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
+ D +D +LI L I L E +G IL+FL G + I L ++ + K+ +I+
Sbjct: 458 DDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MFKS-DRFLII 514
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ +
Sbjct: 515 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 574
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
+ ++ +S+A+AKQR GRAGR PG CY LY + + +PEI R L L
Sbjct: 575 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCL 633
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + + + F MDPPS +A++ +++ L L ALD++ LT LG +A P++P
Sbjct: 634 QIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPH 693
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFF-QPEGDHLTLLA 1005
+ KM+L C D +LTI A + + F P K+ AD +R + + DHLT++
Sbjct: 694 IGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKETRSDHLTVVN 753
Query: 1006 VYEAWK-AKN----FSGPWCFENFVQSRSLRRAQDVRKQ 1039
+E W+ AK + +C+E F+ S +L+ +++ Q
Sbjct: 754 AFEGWEEAKRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 792
Score = 414 (150.8 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 92/197 (46%), Positives = 127/197 (64%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG---- 569
+ +Q R+ LP Y ++KEL+ ++++QV V+ GETG GKTTQVTQ++ + Y RG
Sbjct: 190 IEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILD-NYIERGIGSA 248
Query: 570 -KIGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
+I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 249 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 308
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AEKFS
Sbjct: 309 QWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSATLNAEKFSE 368
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 369 YFGNCPMIHIPGFTFPV 385
Score = 61 (26.5 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V IHP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 859 VSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 903
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 511 (184.9 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 127/356 (35%), Positives = 196/356 (55%)
Query: 702 VEILYTKQPESDYLDASLITVLQIHLT--EPEGDILLFLTGQEEIDFACQSLY-ERMKGL 758
+E+L + D +D L L H+ E EG IL+FL G + I L ++M
Sbjct: 472 IEVL-GMMDDDDNIDLELTAALIRHIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKS 530
Query: 759 GKNVPELIILPVYSALPSEMQSRI-------FDPAPPGKRKVVVATNIAEASLTIDGIFY 811
G+ II+P++S +P+ Q+++ F PPG RK+V+ATNIAE S+TID + Y
Sbjct: 531 GRY--RFIIIPLHSLMPTVSQTQVISLFPQVFKKPPPGVRKIVIATNIAETSITIDDVVY 588
Query: 812 VIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMS 871
VID G K+ ++ + + ++ +S A+AKQR GRAGR PGKCY LY + +
Sbjct: 589 VIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQRKGRAGRVSPGKCYHLYN-GLRASLLD 647
Query: 872 PTSIPEIQRINLGFTTLTMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEG 929
+PEIQR L L +K + + + +F MDPPS +A+ A+ L L ALD +
Sbjct: 648 NYQLPEIQRTPLEELCLQIKVLKLGPIATFLQKTMDPPSDRAIELAITHLVDLNALDRDE 707
Query: 930 LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQK 989
LT LG +A P++P + KM+L LGC D +LTI A + + F+ P K+ ADQ+
Sbjct: 708 KLTPLGFHLARMPVEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADQR 767
Query: 990 RAKFFQ-PEGDHLTLLAVYEAWK-AKN----FSGPWCFENFVQSRSLRRAQDVRKQ 1039
R F Q DHL+++ + W+ AK F +C++NF+ + +L+ Q+++ Q
Sbjct: 768 RKMFSQNSRSDHLSIVNAFLGWEDAKRQGSRFEREYCWDNFLSANTLQMLQNMKGQ 823
Score = 395 (144.1 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 95/242 (39%), Positives = 148/242 (61%)
Query: 469 EDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKL 528
++ + ET +L Q++ V + D E KKD K + + + + R+ LP Y +
Sbjct: 172 KEELNETNLEYLLQDV--VQIPFLD-EELKKDQQKKE---DNAAYIEMLKFRKKLPSYGM 225
Query: 529 KKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG-----KIGCTQPRRVAAMS 583
++EL++ + N+VLV+ GETG GKTTQVTQ++ + + RG ++ CTQPRR++A+S
Sbjct: 226 REELVRLISANRVLVISGETGCGKTTQVTQFILD-DFIQRGQGSLCRVVCTQPRRISAIS 284
Query: 584 VAKRVAEEFGCRLGE--EVGYAIRFED-CTGPDTVIKYMTDGMLLREILIDDNLSQYSVI 640
VA+RVA E +GE GY IR + + Y T G++L+ + D LS + +
Sbjct: 285 VAERVAVERAEPVGEGKSCGYQIRLQSRLPRKQGSLLYCTTGVILQWLHSDPYLSSITHL 344
Query: 641 MLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 700
+LDE HER++ +D+L ++K L+ R DL++++ SATL+AEKFS YF NC + IPG TF
Sbjct: 345 VLDEIHERSVQSDILITIVKDLLTARDDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTF 404
Query: 701 PV 702
PV
Sbjct: 405 PV 406
Score = 60 (26.2 bits), Expect = 3.5e-83, Sum P(3) = 3.5e-83
Identities = 20/84 (23%), Positives = 36/84 (42%)
Query: 1056 KNFTKIRKAITAGFFFHAARKDPQEGYR--------TLVENQPVYIHPSSALFQR---QP 1104
+N ++ I AG + A+ P + T + + V IHP S + Q
Sbjct: 849 ENKKLVKAVIVAGLYPKVAKISPSHNKKRPMPVKVYTKADGK-VCIHPKSVNAEETQFQY 907
Query: 1105 DWVIYHELVMTTKEYMREVTVIDP 1128
W++YH + TT ++ + T + P
Sbjct: 908 KWLVYHLKMKTTSIFLYDCTEVSP 931
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 488 (176.8 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 117/339 (34%), Positives = 188/339 (55%)
Query: 711 ESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
E D +D +LI L I L E +G IL+FL G + I L ++ + K+ + +I+
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MFKS-DKFLII 522
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ +
Sbjct: 523 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 582
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
+ ++ +S+A+AKQR GRAGR PG CY LY + + +PEI R L L
Sbjct: 583 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCL 641
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + + + F MDPPS +A++ ++ L L ALD++ LT LG +A P++P
Sbjct: 642 QIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPH 701
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLA 1005
+ KM+L C D +LTI A + + F P K+ AD +R + + DHLT++
Sbjct: 702 IGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVN 761
Query: 1006 VYEAWKAKNFSG-----PWCFENFVQSRSLRRAQDVRKQ 1039
+E W+ G +C+E F+ S +L+ +++ Q
Sbjct: 762 AFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 800
Score = 414 (150.8 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 93/197 (47%), Positives = 126/197 (63%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ + ++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 198 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 256
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AEKFS
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 376
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 377 YFGNCPMIHIPGFTFPV 393
Score = 60 (26.2 bits), Expect = 1.2e-82, Sum P(3) = 1.2e-82
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V +HP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 867 VAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 911
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 486 (176.1 bits), Expect = 1.5e-82, Sum P(4) = 1.5e-82
Identities = 116/339 (34%), Positives = 188/339 (55%)
Query: 711 ESDYLDASLITVLQIH--LTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
+ D +D +LI L H L E +G IL+FL G + I L ++ + K+ +I+
Sbjct: 580 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MFKS-DRFLII 636
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ +
Sbjct: 637 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 696
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
+ ++ +S+A+AKQR GRAGR PG CY LY + + +PEI R L L
Sbjct: 697 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCL 755
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + + + F MDPPS +A+ +++ L L ALD++ LT LG +A P++P
Sbjct: 756 QIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPH 815
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLA 1005
+ KM+L C D +LTI A + + F P K+ AD +R + + + DHLT++
Sbjct: 816 IGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVN 875
Query: 1006 VYEAWKAKNFSG-----PWCFENFVQSRSLRRAQDVRKQ 1039
+E W+ G +C+E F+ S +L+ +++ Q
Sbjct: 876 AFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 914
Score = 425 (154.7 bits), Expect = 1.5e-82, Sum P(4) = 1.5e-82
Identities = 94/197 (47%), Positives = 128/197 (64%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ + ++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 312 IEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSA 370
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 371 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 430
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D +LS S I+LDE HER + +DVL ++K L+ RPDL++I+ SATL+AEKFS
Sbjct: 431 QWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSE 490
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 491 YFGNCPMIHIPGFTFPV 507
Score = 61 (26.5 bits), Expect = 1.5e-82, Sum P(4) = 1.5e-82
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V IHP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 981 VAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 1025
Score = 37 (18.1 bits), Expect = 1.5e-82, Sum P(4) = 1.5e-82
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 340 EDGVVPSRRPLKRMSSPE---KW 359
E G V RRP +PE KW
Sbjct: 73 EVGAVTPRRPSHSRRAPEAKRKW 95
Score = 37 (18.1 bits), Expect = 3.4e-42, Sum P(4) = 3.4e-42
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLI 672
+R+ ID + S+Y +L E +E + D LL+ L K++ DLR I
Sbjct: 272 IRDKYIDRD-SEY---LLQE-NEPDVALDQQ--LLEDLRKKKSDLRYI 312
>UNIPROTKB|I3LU50 [details] [associations]
symbol:I3LU50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00700000104421
Ensembl:ENSSSCT00000026672 OMA:GHEVAFS Uniprot:I3LU50
Length = 265
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 158/265 (59%), Positives = 209/265 (78%)
Query: 582 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIM 641
MSVAKRV+EE G LGEEVGYAIRFEDCT T+IKYMTDG+LLRE L + +L YS I+
Sbjct: 1 MSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAII 60
Query: 642 LDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
+DEAHER+++TDVLFGLL+++V RR DL+LIVTSAT+DAEKF+ +F N IF IPGRTFP
Sbjct: 61 MDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 120
Query: 702 VEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN 761
V+IL++K P+ DY++A++ LQ+HL+ GDIL+F+ GQE+I+ + E ++ L +N
Sbjct: 121 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-EN 179
Query: 762 VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 821
P L +LP+YS LPS++Q++IF AP G RK +VATNIAE SLT+DGI +VID G+ K
Sbjct: 180 APALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLK 239
Query: 822 VYNPKQGLDSLVITPISQASAKQRA 846
V+NP+ G+D+L I PISQA+A QR+
Sbjct: 240 VFNPRIGMDALQIYPISQANANQRS 264
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 488 (176.8 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 117/339 (34%), Positives = 188/339 (55%)
Query: 711 ESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
E D +D +LI L I L E +G IL+FL G + I L ++ + K+ + +I+
Sbjct: 380 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MFKS-DKFLII 436
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ +
Sbjct: 437 PLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNN 496
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
+ ++ +S+A+AKQR GRAGR PG CY LY + + +PEI R L L
Sbjct: 497 ISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCL 555
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + + + F MDPPS +A++ ++ L L ALD++ LT LG +A P++P
Sbjct: 556 QIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPH 615
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLA 1005
+ KM+L C D +LTI A + + F P K+ AD +R + + DHLT++
Sbjct: 616 IGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVN 675
Query: 1006 VYEAWKAKNFSG-----PWCFENFVQSRSLRRAQDVRKQ 1039
+E W+ G +C+E F+ S +L+ +++ Q
Sbjct: 676 AFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 714
Score = 414 (150.8 bits), Expect = 4.5e-82, Sum P(2) = 4.5e-82
Identities = 93/197 (47%), Positives = 126/197 (63%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ + ++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 112 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 170
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 171 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 230
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AEKFS
Sbjct: 231 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 290
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 291 YFGNCPMIHIPGFTFPV 307
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 482 (174.7 bits), Expect = 9.2e-82, Sum P(3) = 9.2e-82
Identities = 110/343 (32%), Positives = 185/343 (53%)
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
+ ++A L ++ + P G +L+FL G EI + L ++ ++ P++S
Sbjct: 822 ELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHS 881
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
+L SE Q +F P G K++++TNIAE S+TID + YVID G K+ Y+P +G++SL
Sbjct: 882 SLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESL 941
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK- 891
T +S+A+A QR GRAGR G C+ L++ Y +++ +PEIQR+ L L +K
Sbjct: 942 EDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKI 1001
Query: 892 -----AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
A ++ +LS ++PP ++L ++ +L LGAL + LT LG +A P+D
Sbjct: 1002 LEMFSAQSLHSVLS-RLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVR 1060
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV 1006
+ K++L C D LTI A + + F P +K+ +A++K+ F D+L LL
Sbjct: 1061 IGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKLDFAVGNSDYLALLQA 1120
Query: 1007 YEAWKAKNFSGP-----WCFENFVQSRSLRRAQDVRKQLLSIM 1044
Y+ W+ G +C ENF+ R L+ +++Q ++
Sbjct: 1121 YKGWRLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELL 1163
Score = 407 (148.3 bits), Expect = 9.2e-82, Sum P(3) = 9.2e-82
Identities = 88/193 (45%), Positives = 125/193 (64%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY----TTRGK 570
S+ +RQ LP ++ ++ ++ + +QVLVV G TG GKTTQ+ Q++ +A
Sbjct: 529 SMLHERQKLPAWQERETILDLLTSHQVLVVSGMTGCGKTTQIPQFILDASLQGSPNAVAN 588
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 589 IICTQPRRISAISVAERVAKERTERVGVTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 648
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L + +++DE HERT +D L +LK ++ +RPDLR+I+ SATL+AE FS YF +C
Sbjct: 649 DLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSC 708
Query: 691 NIFTIPGRTFPVE 703
I IPGRTFPV+
Sbjct: 709 PIINIPGRTFPVD 721
Score = 74 (31.1 bits), Expect = 9.2e-82, Sum P(3) = 9.2e-82
Identities = 16/59 (27%), Positives = 36/59 (61%)
Query: 1073 AARKDPQ-EGYRTLVENQP-VYIHPSSALFQR---QPDWVIYHELVMTTKEYMREVTVI 1126
A + P+ E + + +N V+IHPSS +Q + +++YHE + T++ ++R+ +++
Sbjct: 1236 AVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKIKTSRVFIRDCSMV 1294
Score = 47 (21.6 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 1098 ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKVADPTK 1146
++F R P VI +++++T VT+ D +++D K DP+K
Sbjct: 890 SVFLRPPAGVI--KIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSK 936
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 477 (173.0 bits), Expect = 2.1e-81, Sum P(3) = 2.1e-81
Identities = 113/342 (33%), Positives = 184/342 (53%)
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
+ ++A L ++ + P G IL+FL G EI + L + +I P++S
Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHS 888
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
+L SE Q +F P G K++++TNIAE S+TID + YVID G K+ Y+ +G++SL
Sbjct: 889 SLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 948
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 892
T +SQA+A QR GRAGR G C+ L+T Y +++ +PEIQR+ L L +K
Sbjct: 949 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1008
Query: 893 MGI---NDLLS-FD-FMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + ++L S F ++PP +L ++ +L LGAL + LT LG +A P+D +
Sbjct: 1009 LEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRI 1068
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
K++L C D LTI A + + F P +K+ +A+QK+ +F D+L LL Y
Sbjct: 1069 GKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLQAY 1128
Query: 1008 EAWKAKNFSGP-----WCFENFVQSRSLRRAQDVRKQLLSIM 1044
+ W+ G +C +NF+ R L+ +++Q ++
Sbjct: 1129 KGWQLSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELL 1170
Score = 409 (149.0 bits), Expect = 2.1e-81, Sum P(3) = 2.1e-81
Identities = 89/193 (46%), Positives = 128/193 (66%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---GYTTR-GK 570
SI ++RQSLP ++ ++ ++ + +QV+V+ G TG GKTTQ+ Q++ + G +
Sbjct: 536 SILQERQSLPAWEERETILNLLRKHQVVVISGMTGCGKTTQIPQFILDDSLNGPPEKVAN 595
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 596 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 655
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L S I++DE HERT +D L +LK +V +RP L++I+ SATL+AE FS YF +C
Sbjct: 656 DTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQRPGLQVILMSATLNAELFSDYFNSC 715
Query: 691 NIFTIPGRTFPVE 703
+ TIPGRTFPV+
Sbjct: 716 PVITIPGRTFPVD 728
Score = 74 (31.1 bits), Expect = 2.1e-81, Sum P(3) = 2.1e-81
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 1073 AARKDPQEG-YRTLVENQP-VYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
A R P+ + + +N V+IHPSS +Q R D +++YHE + T++ ++R+ +++
Sbjct: 1242 AVRMQPKSAELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1300
Score = 38 (18.4 bits), Expect = 1.4e-42, Sum P(3) = 1.4e-42
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 261 RRIGNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLP 305
++I K +R++ + +V + L LS+ DQ++ KD +P
Sbjct: 754 KQISKEKLKARRNRTAFEEV----EEDLRLSLHLQDQDSVKDAVP 794
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 477 (173.0 bits), Expect = 4.8e-81, Sum P(3) = 4.8e-81
Identities = 115/339 (33%), Positives = 183/339 (53%)
Query: 711 ESDYLDASLITVLQIH--LTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
+ D +D LI L H L E +G IL+FL G + I L ++ + K+ II+
Sbjct: 447 DDDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQV--MFKS-DRFIII 503
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P++S +P+ Q+++F PPG RK+V+ATNIAE S+TID + +VID G K+ ++ +
Sbjct: 504 PLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNN 563
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
+ ++ +S+A+AKQR GRAGR PG CY LY + + +PEI R L L
Sbjct: 564 ISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCL 622
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + + + F MDPPS A++ A+ L L ALD + LT LG +A P++P
Sbjct: 623 QIKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPH 682
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQ-PEGDHLTLLA 1005
+ KM+L C D +LTI A + + F P K+ AD +R + + + DHLT++
Sbjct: 683 IGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELSKNTKSDHLTVVN 742
Query: 1006 VYEAWKAKNFSG-----PWCFENFVQSRSLRRAQDVRKQ 1039
+ W+ G +C+E F+ +L+ +++ Q
Sbjct: 743 AFTGWEETRRRGFRTEKDYCWEYFLSPNTLQMLHNMKGQ 781
Score = 408 (148.7 bits), Expect = 4.8e-81, Sum P(3) = 4.8e-81
Identities = 92/199 (46%), Positives = 129/199 (64%)
Query: 514 LSIQEQRQSLPIYKL--KKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK- 570
+ +Q R+ LP Y + K+EL+ +++N+V V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 177 IEMQRFREKLPSYGMRQKQELVNLINNNRVTVISGETGCGKTTQVTQFILD-DYIERGKG 235
Query: 571 ----IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGM 623
I CTQPRR++A+SVA+RVA E C G+ GY IR + I Y T G+
Sbjct: 236 STCRIVCTQPRRISAISVAERVAAERAEACGNGKSTGYQIRLQSRLPRKQGSILYCTTGI 295
Query: 624 LLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 683
+L+ + D +LS S ++LDE HER + +DVL ++K L+ R DL++I+ SATL+AEKF
Sbjct: 296 VLQWLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRLDLKVILMSATLNAEKF 355
Query: 684 SGYFFNCNIFTIPGRTFPV 702
S YF NC + IPG TFPV
Sbjct: 356 SEYFDNCPMIHIPGFTFPV 374
Score = 62 (26.9 bits), Expect = 4.8e-81, Sum P(3) = 4.8e-81
Identities = 23/83 (27%), Positives = 39/83 (46%)
Query: 1060 KIRKA-ITAGFFFHAARKDPQ-EGYRTLVE-----NQPVYIHPSSALFQRQP---DWVIY 1109
K+ KA I AG + A+ P R +V+ + V IHP S + +W++Y
Sbjct: 810 KLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDGTVNIHPKSVNVEETEFHYNWLVY 869
Query: 1110 HELVMTTKEYMREVTVIDPKWLV 1132
H + T+ Y+ + T + P L+
Sbjct: 870 HLKMRTSSIYLYDCTEVSPYCLL 892
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 471 (170.9 bits), Expect = 8.1e-81, Sum P(4) = 8.1e-81
Identities = 115/366 (31%), Positives = 191/366 (52%)
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
+ ++A L ++ + P G IL+FL G EI + L + ++ P++S
Sbjct: 825 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHS 884
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
+L SE Q +F P G K++++TNIAE S+TID + YVID G K+ Y+ +G++SL
Sbjct: 885 SLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESL 944
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 892
T +SQA+A QR GRAGR G C+ L+T + +++ +PEIQR+ L L +K
Sbjct: 945 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKI 1004
Query: 893 MGI---NDLLS-FD-FMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + ++L S F ++PP +L ++ +L LGAL + LT LG +A P+D +
Sbjct: 1005 LEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1064
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
K++L C D LTI A + + F P +K+ +A+QK+ +F D+L LL Y
Sbjct: 1065 GKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAY 1124
Query: 1008 EAWKAKNFSGP-----WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIR 1062
+ W+ G +C +NF+ R L+ +++Q ++ + + G +I
Sbjct: 1125 KGWQLSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSD--IGFVKEGLRAREIE 1182
Query: 1063 KAITAG 1068
K G
Sbjct: 1183 KRAQGG 1188
Score = 416 (151.5 bits), Expect = 8.1e-81, Sum P(4) = 8.1e-81
Identities = 89/193 (46%), Positives = 133/193 (68%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTR-GK 570
SI ++RQSLP ++ ++ +++ + ++QVLV+ G TG GKTTQ+ Q++ + +G +
Sbjct: 532 SILQERQSLPAWEERETILKLLSEHQVLVISGMTGCGKTTQIPQFILDDSLSGPPEKVAN 591
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 592 IICTQPRRISAISVAERVAKERTERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 651
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D +L + I++DE HERT +D L +LK +V +RP+L++I+ SATL+AE FS YF +C
Sbjct: 652 DTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPNLQVILMSATLNAELFSEYFSSC 711
Query: 691 NIFTIPGRTFPVE 703
+ TIPGRTFPV+
Sbjct: 712 PVITIPGRTFPVD 724
Score = 75 (31.5 bits), Expect = 8.1e-81, Sum P(4) = 8.1e-81
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 1073 AARKDPQ-EGYRTLVENQP-VYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
A R P+ + + + +N V+IHPSS +Q R D +++YHE + T++ ++R+ +++
Sbjct: 1238 AVRMQPKSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMV 1296
Score = 39 (18.8 bits), Expect = 8.1e-81, Sum P(4) = 8.1e-81
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 502 FGKALTFGQRSK 513
+GKALTF + S+
Sbjct: 389 YGKALTFAETSE 400
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 480 (174.0 bits), Expect = 9.6e-80, Sum P(2) = 9.6e-80
Identities = 129/395 (32%), Positives = 203/395 (51%)
Query: 707 TKQPESDYLDASLITVLQIHLT--EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE 764
T PE +D SLI L + +G IL+FL G ++I+ Q L E + +
Sbjct: 527 TINPEQ--VDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENP--FFADSAK 582
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
I+ ++S +P+ Q ++F+ PPG RK+V+ATNIAE+++TID + YVID G K+ Y+
Sbjct: 583 FDIICLHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYD 642
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
P + +L + +S+A+AKQR GRAGR PG CY LY+ + M +PEI+R+ +
Sbjct: 643 PYNNVSTLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVE 701
Query: 885 FTTLTMKAMG----INDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAE 940
L +K + ND L +DPP Q++ +A+ L +GAL + LT+LG K
Sbjct: 702 ELCLQVKILDPNCKTNDFLQ-KLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGH 760
Query: 941 FPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP-----REKQAQADQKRAKFFQ 995
P+ P +SKML +V + C D LT+ F P R+K A A + A
Sbjct: 761 LPVHPLISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSPVERQKAAAAKLELASLCG 820
Query: 996 PEGDHLTLLAVYEAWK---AKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL--- 1049
+ DHL ++A +E WK + S +C + FV +++ +R QL S + ++ +
Sbjct: 821 GDSDHLAVVAAFECWKNAKGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRHGIIPN 880
Query: 1050 DVMSAGKNFTK---IRKAITAGFFFHAARKDPQEG 1081
D+ S +N +R + G + R P G
Sbjct: 881 DISSCSQNSRDPGILRAVLAVGLYPMVGRLCPAFG 915
Score = 413 (150.4 bits), Expect = 9.6e-80, Sum P(2) = 9.6e-80
Identities = 85/197 (43%), Positives = 128/197 (64%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG---KIG 572
I + R LPI K + AV NQV+++ GETG GKTTQV QYL + ++++ KI
Sbjct: 180 ITKLRSKLPITSFKDAITSAVESNQVILISGETGCGKTTQVPQYLLDHMWSSKRETCKIV 239
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
CTQPRR++AMSV++R++ E G +GE +GY +R + G + + + T+G+LLR ++
Sbjct: 240 CTQPRRISAMSVSERISCERGESIGENIGYKVRLQSKGGRHSSVVFCTNGILLRVLVGKG 299
Query: 633 NLSQYSVI---MLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
++S S I ++DE HER ++D + +++ L+ P LRLI+ SATLDAE+FSGYF
Sbjct: 300 SVSSVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSNPHLRLILMSATLDAERFSGYFGG 359
Query: 690 CNIFTIPGRTFPVEILY 706
C + +PG T+PV LY
Sbjct: 360 CPVVRVPGFTYPVRTLY 376
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 462 (167.7 bits), Expect = 1.1e-79, Sum P(4) = 1.1e-79
Identities = 107/342 (31%), Positives = 181/342 (52%)
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
D +++ L ++ + P G +L+FL G EI + L + ++ P++S
Sbjct: 872 DLVESLLEWIVDGDHSYPPGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHS 931
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
+L +E Q +F G K++++TNIAE S+TID + YVID G K+ Y+ + ++SL
Sbjct: 932 SLSNEEQQAVFTRPQNGVTKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESL 991
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 892
+S+A+A QR GRAGR G C+ L+T + + +S +PEIQR+ L L +K
Sbjct: 992 EDVWVSRANALQRKGRAGRVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKV 1051
Query: 893 MGIN-----DLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + D + ++PP+ +L +A ++L +LGAL +E LT LG +A P+D +
Sbjct: 1052 LEVFAERPLDSVFSQLIEPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRI 1111
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
K++L C D LTI A + + F P +K+ +A++K+ F DHL L+ Y
Sbjct: 1112 GKLMLLGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKLAFSLANSDHLALMQAY 1171
Query: 1008 EAWKAKNFSG-----PWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+ W SG +C ENF+ R L+ +++Q ++
Sbjct: 1172 KGWCNAAQSGFKAGYQYCRENFLSIRGLQEIACLKRQFAELL 1213
Score = 418 (152.2 bits), Expect = 1.1e-79, Sum P(4) = 1.1e-79
Identities = 91/198 (45%), Positives = 127/198 (64%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE----AGYT 566
R +S+QEQRQ LP ++ ++ +++ + NQVLV+ G TG GKTTQ+ Q++ + G
Sbjct: 570 RRYISMQEQRQKLPAWQKREAILECLVKNQVLVISGMTGCGKTTQIPQFILDNFLQTGRP 629
Query: 567 TR-GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 625
R I CTQPRR++A++VA RVA+E LG GY IR E T + + T G+LL
Sbjct: 630 DRVANIICTQPRRISAIAVATRVAQERAEALGHSTGYQIRLETVRSSITRLMFCTTGVLL 689
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
R + D LS + +++DE HERT +D L +LK L+ +R DL++I+ SATL+AE FS
Sbjct: 690 RRLEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRTDLKVIMMSATLNAELFSQ 749
Query: 686 YFFNCNIFTIPGRTFPVE 703
YF NC IPGRTFPVE
Sbjct: 750 YFNNCPCIHIPGRTFPVE 767
Score = 74 (31.1 bits), Expect = 1.1e-79, Sum P(4) = 1.1e-79
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 1073 AARKDPQ-EGYRTLVENQ-PVYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
A + P+ E R + ++ V+IHPSS F R D +++YHE V T++ ++R+ +++
Sbjct: 1286 AMKMQPKAEEQRFMTKSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMV 1344
Score = 38 (18.4 bits), Expect = 1.1e-79, Sum P(4) = 1.1e-79
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 305 PLKKISEDDALGNNPSGTRDGPTT 328
P K S + + N S TRD T+
Sbjct: 464 PAKSRSNKNNVDNRTSATRDQSTS 487
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 475 (172.3 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 106/254 (41%), Positives = 159/254 (62%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG 569
+RSK IQ+ R LPI+ + +++A+++N V VV GETGSGKTTQ+ Q+L EAGY + G
Sbjct: 224 ERSK-EIQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEG 282
Query: 570 K-IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 628
+ IG T+PRRVAA+++A+RV E +EV Y IR+E T I +MTDG+L++E+
Sbjct: 283 ELIGITEPRRVAAIAMAQRVGVELA--KPDEVSYQIRYEGTRSETTNILFMTDGVLMKEM 340
Query: 629 LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPD----LRLIVTSATLDAEKFS 684
D L +YSVI++DEAHER++++DVL G+L ++V R LRL++ SATL + F+
Sbjct: 341 EQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFT 400
Query: 685 GY----FFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTG 740
+ + R FPV + + K+ DY+ ++ +IH T P G IL+F+TG
Sbjct: 401 HKKLFPLLTPKVIKVDARQFPVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTG 460
Query: 741 QEEIDFACQSLYER 754
Q E+ L +R
Sbjct: 461 QHEVKQLITKLKKR 474
Score = 350 (128.3 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 83/213 (38%), Positives = 117/213 (54%)
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
L LP+YS L Q R+FD P G R V++TN+AE SLTI G+ YVID GF K+ +Y+
Sbjct: 575 LYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYD 634
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
G+ + ISQAS QRAGRAGR G YRLY+ + Y++ + PEI
Sbjct: 635 SITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFVKFAD-PEILSKPAD 693
Query: 885 FTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE-------EGLLTKLGRK 937
L +K+M I +++F F P Q L SA ++L LGAL E E +TKLG+
Sbjct: 694 QLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKT 753
Query: 938 MAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
+A FPL P +K + + + +I+++
Sbjct: 754 LAVFPLAPSYAKFIAMADQHNLMSHAILLISLL 786
Score = 113 (44.8 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 1075 RKDPQEG-YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTT-KEYMREVTVIDPKWLV 1132
+++ Q+G Y T + V+I P S +F +P++VIY ELV K+ M V +D +WL
Sbjct: 925 QEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIYQELVQVNEKKLMTSVCAVDKEWLS 984
Query: 1133 DLAPRFFKVADPTKMSKRKRQERIEPLYD 1161
LA + + + K QE P+YD
Sbjct: 985 RLAESYCNYGE-----QDKNQE---PIYD 1005
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 436 (158.5 bits), Expect = 7.5e-79, Sum P(3) = 7.5e-79
Identities = 100/249 (40%), Positives = 149/249 (59%)
Query: 473 PETGERHLA--QELRGVGLSAYDMP--EWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKL 528
PE +L ++ + L D E ++ F K L R + ++E RQ LP++K
Sbjct: 522 PEDSWENLVSDEDFNNLSLETADTDNLEPSRNLFRK-LQSSSRYQKFLKE-RQELPVFKH 579
Query: 529 KKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG----KIGCTQPRRVAAMSV 584
+ +++ + ++V+VV GETGSGK+TQV +L E G I CTQPRR++A+S+
Sbjct: 580 RHSIVETLKKHRVVVVAGETGSGKSTQVPHFLLEDLLLDEGTRKCNIVCTQPRRISAVSL 639
Query: 585 AKRVAEEFGCRLGEE-----VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSV 639
A RV EE GC G GY IR E TG T + Y T G+LLR++ D LS S
Sbjct: 640 ATRVCEELGCESGPGGKNSLCGYQIRMESRTGEATRLLYCTTGVLLRKLQEDGLLSSISH 699
Query: 640 IMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRT 699
+++DE HER++H+D L +LK+++ +R DL LI+ SAT+D+EKFS YF +C I I GR+
Sbjct: 700 VIVDEVHERSVHSDFLLVILKEILHKRSDLHLILMSATVDSEKFSSYFAHCPILRISGRS 759
Query: 700 FPVEILYTK 708
+PVE+ + +
Sbjct: 760 YPVEVFHVE 768
Score = 424 (154.3 bits), Expect = 7.5e-79, Sum P(3) = 7.5e-79
Identities = 113/326 (34%), Positives = 173/326 (53%)
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKN--VPELIILPVYSALPSEMQSRIFDPAPP 788
EG +L+FL G I Q LY+ + + ++ ++S L ++ Q+ F P
Sbjct: 868 EGAVLIFLPGLAHI----QQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPL 923
Query: 789 GKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGR 848
G RK+V+ATNIAE +TI + +VID G K+N Y+ + SL T +S+ASA QR GR
Sbjct: 924 GVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGR 983
Query: 849 AGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL-TMKA-MGI-NDLLSFDFMD 905
AGR G C+R+YT + + M S+PEI R+ L L MK +G D LS +D
Sbjct: 984 AGRVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCLHIMKCNLGSPEDFLS-RALD 1041
Query: 906 PPSPQALISAMEQLYSLGALD-EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
PP PQ + +AM L +GA E LT LG+ +A P++ + KML+ GC D +
Sbjct: 1042 PPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVA 1101
Query: 965 TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWK-AKNFSG-----P 1018
T+ A++ + F P ++ +AD ++ DHLT+ Y WK A+ G
Sbjct: 1102 TLAAVMTEKSPFTTPIGRKDEADLAKSSIALAVSDHLTIYNAYLGWKKARQEGGHRAEMT 1161
Query: 1019 WCFENFVQSRSLRRAQDVRKQLLSIM 1044
+C NF+ SL +DV+++L+ ++
Sbjct: 1162 YCRRNFLNRTSLLTLEDVKQELIKLV 1187
Score = 78 (32.5 bits), Expect = 7.5e-79, Sum P(3) = 7.5e-79
Identities = 24/77 (31%), Positives = 35/77 (45%)
Query: 1061 IRKAITAGFFFHAAR------KDPQEGYRTLVENQP--VYIHPSSALFQRQPD-WVIYHE 1111
++ +TAG + + + D E LVE +HPSS Q W++Y E
Sbjct: 1218 LKAVLTAGLYDNVGKIMYTKSVDITEKLACLVETAQGKAQVHPSSVNRDLQVHGWLLYQE 1277
Query: 1112 LVMTTKEYMREVTVIDP 1128
V K Y+RE T+I P
Sbjct: 1278 KVRYAKVYLRETTLISP 1294
Score = 43 (20.2 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 11 KKLEYFSLVSKVCSELETHLGFGDK 35
+++ SL ++VC EL G G K
Sbjct: 632 RRISAVSLATRVCEELGCESGPGGK 656
Score = 37 (18.1 bits), Expect = 2.2e-38, Sum P(3) = 2.2e-38
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 705 LYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSL 751
+YT+ +++ S+ +L++ L E I+ G E DF ++L
Sbjct: 995 MYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLGSPE-DFLSRAL 1040
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 467 (169.5 bits), Expect = 8.8e-79, Sum P(5) = 8.8e-79
Identities = 114/354 (32%), Positives = 184/354 (51%)
Query: 726 HLTEPE-GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFD 784
H P+ G IL+FL G EI + L + +I P++S+L SE Q +F
Sbjct: 836 HSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFV 895
Query: 785 PAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQ 844
P G K++++TNIAE S+TID + YVID G K+ Y+ +G++SL T +SQA+A Q
Sbjct: 896 KPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQ 955
Query: 845 RAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGI---NDLLSF 901
R GRAGR G C+ L+T + +++ +PEIQR+ L L +K + + ++L S
Sbjct: 956 RKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSV 1015
Query: 902 --DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGC 959
++PP +L ++ +L LGAL + LT LG +A P+D + K++L C
Sbjct: 1016 FARLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRC 1075
Query: 960 SDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP- 1018
D LTI A + + F P +K+ +A+QK+ +F D+L LL Y+ W+ G
Sbjct: 1076 LDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLRAYKGWQLSMKEGMR 1135
Query: 1019 ----WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAG 1068
+C +NF+ R L+ +++Q ++ + + G +I K G
Sbjct: 1136 ASYNYCRQNFLSGRVLQEMASLKRQFTELLSD--IGFVKEGLRAREIEKRAQGG 1187
Score = 407 (148.3 bits), Expect = 8.8e-79, Sum P(5) = 8.8e-79
Identities = 89/193 (46%), Positives = 129/193 (66%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---GYTTR-GK 570
S+ ++RQSLP ++ ++ +++ + +QVLVV G TG GKTTQ+ Q++ + G +
Sbjct: 529 SVLQERQSLPAWEERENILKLLSKHQVLVVSGMTGCGKTTQIPQFILDDSLNGPPEKVAN 588
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 589 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 648
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L + I++DE HERT +D L +LK +V +RP L++I+ SATL+AE FS YF +C
Sbjct: 649 DTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQRPTLQVILMSATLNAELFSEYFNSC 708
Query: 691 NIFTIPGRTFPVE 703
+ TIPGRTFPV+
Sbjct: 709 PVITIPGRTFPVD 721
Score = 75 (31.5 bits), Expect = 8.8e-79, Sum P(5) = 8.8e-79
Identities = 18/59 (30%), Positives = 37/59 (62%)
Query: 1073 AARKDPQ-EGYRTLVENQP-VYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
A R P+ + + + +N V+IHPSS +Q R D +++YHE + T++ ++R+ +++
Sbjct: 1238 AVRMQPKSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMV 1296
Score = 39 (18.8 bits), Expect = 8.8e-79, Sum P(5) = 8.8e-79
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 502 FGKALTFGQRSK 513
+GKALTF + S+
Sbjct: 386 YGKALTFAETSE 397
Score = 37 (18.1 bits), Expect = 8.8e-79, Sum P(5) = 8.8e-79
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 202 GDRENDDSGDRSGRYRGNEPELYQVYKGRV 231
G + G R GR ++ + + GRV
Sbjct: 14 GGGKGSSRGGRGGRSHASKSQKVNIGNGRV 43
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 456 (165.6 bits), Expect = 1.8e-78, Sum P(3) = 1.8e-78
Identities = 124/358 (34%), Positives = 189/358 (52%)
Query: 704 ILYTKQPESDYLDASLITVLQIHLTE-P-----EGDILLFLTGQEEIDFACQSLYERMKG 757
+LY P LD LI L ++L + P EG +L+FL G I Q LY+ +
Sbjct: 837 VLYMN-PHKINLD--LILELLVYLDKSPQFRNIEGAVLIFLPGLAHI----QQLYDLLSN 889
Query: 758 LGKNVPELI-ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 816
+ E ++ ++S L ++ Q+ F PPG RK+V+ATNIAE +TI + +VID G
Sbjct: 890 DRRFYSERYQLIALHSVLSTQDQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTG 949
Query: 817 FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIP 876
K+N Y+ + SLV T +S+ASA QR GRAGR G C+RLYT + + S+P
Sbjct: 950 RTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLE-YSVP 1008
Query: 877 EIQRINLGFTTL-TMKA-MGI-NDLLSFDFMDPPSPQALISAMEQLYSLGALD-EEGLLT 932
EI R+ L L MK +G D LS +DPP PQ + +AM L +GA + E LT
Sbjct: 1009 EILRVPLEELCLHIMKCDLGSPEDFLS-KALDPPQPQVISNAMNLLRKIGACEPSEPKLT 1067
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
LG+ +A P++ + KML+ GC + + T+ A++ + F P ++ +AD ++
Sbjct: 1068 PLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSS 1127
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSG------PWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+ DHLT+ Y WK G +C NF+ SL +DV+++L+ ++
Sbjct: 1128 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLV 1185
Score = 405 (147.6 bits), Expect = 1.8e-78, Sum P(3) = 1.8e-78
Identities = 98/261 (37%), Positives = 156/261 (59%)
Query: 461 PKDLNRPWEDPMPETGERHLAQE-LRGVGLS---AYDMPEWKKDAFGKALTFGQRSKLSI 516
P++ EDP E+ E ++ E L + L A D+ E ++ F + + + +L
Sbjct: 510 PENKTETAEDP-EESWENLVSDEDLSALSLEPTGAEDL-EPVRNLFRRLQSTPKYQRLL- 566
Query: 517 QEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE------AGYTTRGK 570
++RQ LP++K + +++ + ++V+VV GETGSGK+TQV +L E G +
Sbjct: 567 -KERQQLPVFKHRASIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNDCG-ARKCN 624
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEE-----VGYAIRFEDCTGPDTVIKYMTDGMLL 625
I CTQPRR++A+S+A RV EE GC G GY IR E T + Y T G+LL
Sbjct: 625 IVCTQPRRISAVSLATRVCEELGCEGGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLL 684
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
R++ D L+ S +++DE HER++ +D L +LK+++++R DL LI+ SAT+D++KFS
Sbjct: 685 RKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFST 744
Query: 686 YFFNCNIFTIPGRTFPVEILY 706
YF +C I I GR++PVE+ +
Sbjct: 745 YFTHCPILRISGRSYPVEVFH 765
Score = 72 (30.4 bits), Expect = 1.8e-78, Sum P(3) = 1.8e-78
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 1093 IHPSSALFQRQP-DWVIYHELVMTTKEYMREVTVIDP 1128
+HPSS Q W++Y E V + Y+RE T+I P
Sbjct: 1253 VHPSSVNRDLQTYGWLLYQEKVRYARVYLRETTLITP 1289
Score = 38 (18.4 bits), Expect = 1.9e-39, Sum P(4) = 1.9e-39
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 11 KKLEYFSLVSKVCSELETHLGFGDK 35
+++ SL ++VC EL G G +
Sbjct: 631 RRISAVSLATRVCEELGCEGGPGGR 655
Score = 38 (18.4 bits), Expect = 1.9e-39, Sum P(4) = 1.9e-39
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 704 ILYTKQPESDYL-DASLITVLQIHLTEPEGDILLFL 738
+L K E L D S + V ++H + D LL +
Sbjct: 682 VLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVI 717
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 477 (173.0 bits), Expect = 2.4e-78, Sum P(3) = 2.4e-78
Identities = 117/366 (31%), Positives = 193/366 (52%)
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
+ ++A L ++ + P G IL+FL G EI + L + +I P++S
Sbjct: 781 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 840
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
+L SE Q +F P G K++++TNIAE S+TID + YVID G K+ Y+ +G++SL
Sbjct: 841 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 900
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 892
T +SQA+A QR GRAGR G C+ L+T Y +++ +PEIQR+ L L +K
Sbjct: 901 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 960
Query: 893 MGI---NDLLS-FD-FMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + ++L S F ++PP +L ++ +L LGAL + LT LG +A P+D +
Sbjct: 961 LEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1020
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
K++L C D LTI A + + F P +K+ +A+QK+ +F D+L LL Y
Sbjct: 1021 GKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAY 1080
Query: 1008 EAWK-----AKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIR 1062
+ W+ + S +C +NF+ R+L+ +++Q ++ + + G +I
Sbjct: 1081 KGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSD--IGFVKEGLRAKEIE 1138
Query: 1063 KAITAG 1068
K G
Sbjct: 1139 KRAQGG 1144
Score = 382 (139.5 bits), Expect = 2.4e-78, Sum P(3) = 2.4e-78
Identities = 85/193 (44%), Positives = 124/193 (64%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---GYTTR-GK 570
+I ++RQ LP ++ ++ +++ + +QV+V+ G TG GKTTQ+ Q++ + G R
Sbjct: 487 AILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVAN 546
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 547 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 606
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L + I++DE HERT +D L +LK +V +R L++I+ SATLDA FS YF C
Sbjct: 607 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYC 666
Query: 691 NIFTIPGRTFPVE 703
+ TIPGR FPV+
Sbjct: 667 PVITIPGRAFPVD 679
Score = 71 (30.1 bits), Expect = 2.4e-78, Sum P(3) = 2.4e-78
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 1091 VYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
V+IHPSS +Q R D +++YHE + T++ ++R+ +++
Sbjct: 1214 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1252
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 477 (173.0 bits), Expect = 3.0e-78, Sum P(3) = 3.0e-78
Identities = 117/366 (31%), Positives = 193/366 (52%)
Query: 713 DYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYS 772
+ ++A L ++ + P G IL+FL G EI + L + +I P++S
Sbjct: 834 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHS 893
Query: 773 ALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSL 832
+L SE Q +F P G K++++TNIAE S+TID + YVID G K+ Y+ +G++SL
Sbjct: 894 SLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESL 953
Query: 833 VITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA 892
T +SQA+A QR GRAGR G C+ L+T Y +++ +PEIQR+ L L +K
Sbjct: 954 EDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKI 1013
Query: 893 MGI---NDLLS-FD-FMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + ++L S F ++PP +L ++ +L LGAL + LT LG +A P+D +
Sbjct: 1014 LEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRI 1073
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY 1007
K++L C D LTI A + + F P +K+ +A+QK+ +F D+L LL Y
Sbjct: 1074 GKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAY 1133
Query: 1008 EAWK-----AKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIR 1062
+ W+ + S +C +NF+ R+L+ +++Q ++ + + G +I
Sbjct: 1134 KGWQLSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSD--IGFVKEGLRAKEIE 1191
Query: 1063 KAITAG 1068
K G
Sbjct: 1192 KRAQGG 1197
Score = 382 (139.5 bits), Expect = 3.0e-78, Sum P(3) = 3.0e-78
Identities = 85/193 (44%), Positives = 124/193 (64%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---GYTTR-GK 570
+I ++RQ LP ++ ++ +++ + +QV+V+ G TG GKTTQ+ Q++ + G R
Sbjct: 540 AILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVAN 599
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 600 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 659
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L + I++DE HERT +D L +LK +V +R L++I+ SATLDA FS YF C
Sbjct: 660 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYC 719
Query: 691 NIFTIPGRTFPVE 703
+ TIPGR FPV+
Sbjct: 720 PVITIPGRAFPVD 732
Score = 71 (30.1 bits), Expect = 3.0e-78, Sum P(3) = 3.0e-78
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 1091 VYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
V+IHPSS +Q R D +++YHE + T++ ++R+ +++
Sbjct: 1267 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1305
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 475 (172.3 bits), Expect = 5.0e-78, Sum P(3) = 5.0e-78
Identities = 114/349 (32%), Positives = 185/349 (53%)
Query: 730 PEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPG 789
P G +L+FL G EI + L + +I P++S+L SE Q +F P G
Sbjct: 848 PPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMG 907
Query: 790 KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 849
K++++TNIAE S+TID + YVID G K+ Y+ +G++SL T +SQA+A QR GRA
Sbjct: 908 VTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRA 967
Query: 850 GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGI---NDLLS-FD-FM 904
GR G C+ L+T Y +++ +PEIQR+ L L +K + + ++L S F +
Sbjct: 968 GRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLI 1027
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
+PP +L ++ +L LGAL + LT LG +A P+D + K++L C D L
Sbjct: 1028 EPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPAL 1087
Query: 965 TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWK-----AKNFSGPW 1019
TI A + + F P +K+ +A+QK+ +F D+L LL Y+ W+ + S +
Sbjct: 1088 TIAASLAFKSPFVSPWDKKEEANQKKLEFAFANSDYLALLCAYKGWQLSTKESARASYNY 1147
Query: 1020 CFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAG 1068
C +NF+ R+L+ +++Q ++ + + G +I K G
Sbjct: 1148 CRQNFLSGRTLQEMASLKRQFTELLSD--IGFVKEGLRAKEIEKRAQGG 1194
Score = 382 (139.5 bits), Expect = 5.0e-78, Sum P(3) = 5.0e-78
Identities = 85/193 (44%), Positives = 124/193 (64%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---GYTTR-GK 570
+I ++RQ LP ++ ++ +++ + +QV+V+ G TG GKTTQ+ Q++ + G R
Sbjct: 537 AILQERQLLPAWEERETILKLLSKHQVVVISGMTGCGKTTQIPQFILDNSLNGPPERVAN 596
Query: 571 IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
I CTQPRR++A+SVA+RVA+E R+G VGY IR E T + Y T G+LLR +
Sbjct: 597 IICTQPRRISAISVAERVAKERAERVGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEG 656
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L + I++DE HERT +D L +LK +V +R L++I+ SATLDA FS YF C
Sbjct: 657 DATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRATLQVILMSATLDAGLFSKYFSYC 716
Query: 691 NIFTIPGRTFPVE 703
+ TIPGR FPV+
Sbjct: 717 PVITIPGRAFPVD 729
Score = 71 (30.1 bits), Expect = 5.0e-78, Sum P(3) = 5.0e-78
Identities = 14/39 (35%), Positives = 28/39 (71%)
Query: 1091 VYIHPSSALFQ-RQPD--WVIYHELVMTTKEYMREVTVI 1126
V+IHPSS +Q R D +++YHE + T++ ++R+ +++
Sbjct: 1264 VHIHPSSVNYQVRHFDSPYLLYHEKIKTSRVFIRDCSMV 1302
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 447 (162.4 bits), Expect = 7.0e-78, Sum P(3) = 7.0e-78
Identities = 124/358 (34%), Positives = 188/358 (52%)
Query: 704 ILYTKQPESDYLDASLITVLQIHLTE-P-----EGDILLFLTGQEEIDFACQSLYERMKG 757
ILY P LD LI L ++L + P EG +L+FL G I Q LY+ +
Sbjct: 836 ILYMN-PHKINLD--LILELLVYLDKSPQFRNIEGAVLIFLPGLAHI----QQLYDLLSS 888
Query: 758 LGKNVPELI-ILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 816
+ E ++ ++S L ++ Q+ F PPG RK+V+ATNIAE +TI + +VID G
Sbjct: 889 DRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTG 948
Query: 817 FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIP 876
K+N Y+ + SLV T +S+ASA QR GRAGR G C+RLYT + + S+P
Sbjct: 949 RTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLD-YSVP 1007
Query: 877 EIQRINLGFTTL-TMKA-MGI-NDLLSFDFMDPPSPQALISAMEQLYSLGALD-EEGLLT 932
EI R+ L L MK +G D LS +DPP Q + +AM L +GA + E LT
Sbjct: 1008 EILRVPLEELCLHIMKCDLGSPEDFLS-KALDPPQLQVISNAMNLLRKIGACEPNEPKLT 1066
Query: 933 KLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK 992
LG+ +A P++ + KML+ GC + + T+ A++ + F P ++ +AD ++
Sbjct: 1067 PLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSS 1126
Query: 993 FFQPEGDHLTLLAVYEAWKAKNFSG------PWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+ DHLT+ Y WK G +C NF+ SL +DV+++L+ ++
Sbjct: 1127 LAVADSDHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLV 1184
Score = 404 (147.3 bits), Expect = 7.0e-78, Sum P(3) = 7.0e-78
Identities = 97/253 (38%), Positives = 152/253 (60%)
Query: 469 EDPMPETGERHLAQE-LRGVGL---SAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLP 524
EDP E+ E ++ E L + L SA D+ + F + + + +L ++RQ LP
Sbjct: 517 EDP-EESWENLVSDEDLAALSLEPTSAEDLAP-VRSLFRRLQSTPKYQRLL--KERQQLP 572
Query: 525 IYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE------AGYTTRGKIGCTQPRR 578
++K + +++ + ++V+VV GETGSGK+TQV +L E G + I CTQPRR
Sbjct: 573 VFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECG-ARKCNIVCTQPRR 631
Query: 579 VAAMSVAKRVAEEFGCRLGEE-----VGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN 633
++A+S+A RV EE GC G GY IR E T + Y T G+LLR++ D
Sbjct: 632 ISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGL 691
Query: 634 LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIF 693
L+ S +++DE HER++ +D L +LK+++++R DL LI+ SAT+D++KFS YF +C I
Sbjct: 692 LADVSHVIVDEVHERSVQSDFLLVILKEILQKRSDLHLILMSATVDSDKFSTYFTHCPIL 751
Query: 694 TIPGRTFPVEILY 706
I GR++PVE+ +
Sbjct: 752 RISGRSYPVEVFH 764
Score = 77 (32.2 bits), Expect = 7.0e-78, Sum P(3) = 7.0e-78
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 1093 IHPSSALFQRQP-DWVIYHELVMTTKEYMREVTVIDP 1128
+HPSS Q W++Y E V T+ Y+RE T+I P
Sbjct: 1252 VHPSSVNRDLQTYGWLLYQEKVRYTRVYLRETTLITP 1288
Score = 40 (19.1 bits), Expect = 3.6e-39, Sum P(4) = 3.6e-39
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 11 KKLEYFSLVSKVCSELETHLGFGDK 35
+++ SL ++VC EL G G +
Sbjct: 630 RRISAVSLATRVCEELGCESGPGGR 654
Score = 38 (18.4 bits), Expect = 3.6e-39, Sum P(4) = 3.6e-39
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 704 ILYTKQPESDYL-DASLITVLQIHLTEPEGDILLFL 738
+L K E L D S + V ++H + D LL +
Sbjct: 681 VLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVI 716
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 464 (168.4 bits), Expect = 8.6e-78, Sum P(2) = 8.6e-78
Identities = 127/391 (32%), Positives = 203/391 (51%)
Query: 710 PESDYL-DASLITVLQIHL--TEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE-L 765
PES+ D I L ++ EPEG IL+FL G ++I L + G+ + +
Sbjct: 398 PESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHM 457
Query: 766 IILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNP 825
+ P++S + S Q +F P G+RKV+++T IAE S+TID + YVI+ G K Y+
Sbjct: 458 AVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDI 517
Query: 826 KQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGF 885
+ + SL +++A+ +QR GRAGR PG CY L++ A + M PEI R L
Sbjct: 518 ETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSR-AREDRMDDIPTPEILRSKLES 576
Query: 886 TTLTMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL 943
L++K + I+D F ++ P+P+A+ +E L + ALD+ G LT LG +A+ P+
Sbjct: 577 IILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPI 636
Query: 944 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ-KRAKFFQPEGDHLT 1002
DP + KM+L S C D I + A + + FY P K+++ D+ KR DHL
Sbjct: 637 DPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLM 696
Query: 1003 LLAVYEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS------ 1053
+ A++ +S +C++NF+ S +L++ + ++ Q ++ YK S
Sbjct: 697 VHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAA 756
Query: 1054 AGKNFTKI---RKAITAGFFFHAA--RKDPQ 1079
+ KN KI R I AG + + A RK Q
Sbjct: 757 SNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQ 787
Score = 405 (147.6 bits), Expect = 8.6e-78, Sum P(2) = 8.6e-78
Identities = 86/194 (44%), Positives = 125/194 (64%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE----AGYTTRGKIGC 573
E R+ LP K ++IQAV +NQV++++G TG GKTTQV Q L + G + +I C
Sbjct: 148 EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIIC 207
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV-IKYMTDGMLLREILIDD 632
TQPRR++A+++A+ V+ E LG VGY IR E + I Y T G+LL+++ D
Sbjct: 208 TQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDP 267
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
+ SV++LDE HER++ TD+L GLLK ++ RPDL++I+ SAT+ + F YF NC +
Sbjct: 268 LMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPM 327
Query: 693 FTIPGRTFPVEILY 706
F I G FPV++LY
Sbjct: 328 FRIEGVMFPVKMLY 341
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 425 (154.7 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
Identities = 94/197 (47%), Positives = 128/197 (64%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ + ++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 192 IEMQHFREKLPSYGMQKELVNMIDNHQVTVISGETGCGKTTQVTQFILD-DYIERGKGSA 250
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 251 CRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 310
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D +LS S I+LDE HER + +DVL ++K L+ RPDL++I+ SATL+AEKFS
Sbjct: 311 QWLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRPDLKVILMSATLNAEKFSE 370
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 371 YFGNCPMIHIPGFTFPV 387
Score = 417 (151.9 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
Identities = 95/272 (34%), Positives = 151/272 (55%)
Query: 776 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 835
S+ ++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + + ++
Sbjct: 510 SDTIGQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAE 569
Query: 836 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGI 895
+S+A+AKQR GRAGR PG CY LY + + +PEI R L L +K + +
Sbjct: 570 WVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQIKILRL 628
Query: 896 NDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLA 953
+ F MDPPS +A+ +++ L L ALD++ LT LG +A P++P + KM+L
Sbjct: 629 GGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILF 688
Query: 954 SVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLAVYEAWKA 1012
C D +LTI A + + F P K+ AD +R + + + DHLT++ +E W+
Sbjct: 689 GALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTKSDHLTVVNAFEGWEE 748
Query: 1013 KNFSG-----PWCFENFVQSRSLRRAQDVRKQ 1039
G +C+E F+ S +L+ +++ Q
Sbjct: 749 ARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 780
Score = 61 (26.5 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V IHP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 847 VAIHPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 891
Score = 57 (25.1 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 711 ESDYLDASLITVLQIH--LTEPEGDILLFLTGQEEI 744
+ D +D +LI L H L E +G IL+FL G + I
Sbjct: 460 DDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNI 495
Score = 37 (18.1 bits), Expect = 6.5e-37, Sum P(4) = 6.5e-37
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLI 672
+R+ ID + S+Y +L E +E + D LL+ L K++ DLR I
Sbjct: 152 IRDKYIDRD-SEY---LLQE-NEPDVALDQQ--LLEDLRKKKSDLRYI 192
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 453 (164.5 bits), Expect = 4.2e-77, Sum P(2) = 4.2e-77
Identities = 124/403 (30%), Positives = 201/403 (49%)
Query: 695 IPGRTFPVEILY--------------TKQPESDYLD-ASLITVLQI----HLTEPEGDIL 735
+PGR FP+++ Y +K+ + + +D A + VL + + T GD+L
Sbjct: 317 VPGRLFPIKLRYLPPPALELKAGQATSKRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVL 376
Query: 736 LFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVV 795
+F++G EI+ ++++E ++LP++S QS++FD AP G RK +V
Sbjct: 377 IFVSGVNEIESVVEAVHE----YATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIV 432
Query: 796 ATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPG 855
+TNIAE SLT+DG+ +V+D G K+ ++ L +S++SA QR GRAGRTGPG
Sbjct: 433 STNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPG 492
Query: 856 KCYRLYTESAYRN-EMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALIS 914
C+RLYT Y E PT PEI R+ L L M +MG+ D+ +F F++ P + +
Sbjct: 493 VCFRLYTAEQYNAFEAYPT--PEIYRVPLDTMLLQMVSMGLPDVRAFPFIEAPETERIEQ 550
Query: 915 AMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN 974
+ L AL E +T LGR +A P++ + KMLL +++LT+ AM+ N
Sbjct: 551 TILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQN 610
Query: 975 IFYRPREKQAQADQK----RAKFFQPEGDHLTLLAVYEAW----KAKNFSGPWCFENFVQ 1026
P +A DQ+ R GD TL+ +Y W ++ + WC ++
Sbjct: 611 ----PLTNRAHTDQRCVRERESLESDHGDLFTLVRLYNVWVQLKMRRDGTRQWCRRLGIE 666
Query: 1027 SRSLRRAQDVRKQLLSIMDKYKLDVMS-AGKNFTKIRKAITAG 1068
+ +R+Q I++ + V S + T +A G
Sbjct: 667 EQRFYEVTKLRQQFQRILESCGMVVASDSDSQLTSAERATRHG 709
Score = 414 (150.8 bits), Expect = 4.2e-77, Sum P(2) = 4.2e-77
Identities = 88/203 (43%), Positives = 129/203 (63%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG 569
QR + Q QR +LPI + +K+L +A+ ++V++V G+TG GK+TQV QYL + GY +
Sbjct: 134 QRIRKLRQTQR-NLPIARFRKDLREALDTSRVVIVAGDTGCGKSTQVPQYLYDFGYRS-- 190
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
I CTQPRR+A +S+ KRVA E G V + IRFE T I ++T+G+LLR++
Sbjct: 191 -IACTQPRRLACVSLCKRVAHELLDDYGSRVAFQIRFERSRTKLTNILFITEGLLLRQLA 249
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ NL QY ++LDE HER + D L G+ K L++ RP L+LI+ SAT++ E F GYF
Sbjct: 250 VAANLDQYDALILDEIHERNLFGDFLLGVTKCLLRARPQLKLILMSATINVELFHGYFGE 309
Query: 690 --CNIFTIPGRTFPVEILYTKQP 710
+ +PGR FP+++ Y P
Sbjct: 310 EGARLVQVPGRLFPIKLRYLPPP 332
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 722 (259.2 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 165/417 (39%), Positives = 247/417 (59%)
Query: 521 QSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVA 580
+ LPI + ++ A+ NQV+++ GETGSGKTTQ+ + E G G IG TQPRR+A
Sbjct: 97 EGLPISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHTQPRRIA 156
Query: 581 AMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVI 640
A +VA R+AEE G +LGE+VGY +RF D + IK MTDG+LL E+ D L +Y I
Sbjct: 157 ARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGILLAEMQRDRLLLKYDTI 216
Query: 641 MLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCN-----IFTI 695
++DEAHER+++ D + G LKQ++ +RPDL+LI+TSAT+D ++F+ +F + N I +
Sbjct: 217 IIDEAHERSLNIDFILGYLKQILIKRPDLKLIITSATIDPQRFAKHFSSKNGLPAPIIEV 276
Query: 696 PGRTFPVEILYTKQPESDYLDASLITVLQIHLTE---PEGDILLFLTGQEEIDFAC--QS 750
GRTFPVE+ Y + +D + ++ + D L + + F +
Sbjct: 277 SGRTFPVEMRYRPLNDRAVIDDDDQSPQEVDIISGILSAVDELSDCGNGDILVFLNGERE 336
Query: 751 LYERMKGLGK-NVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI 809
+ + L K N+ +LP+Y+ L Q++IF P G R +V+ATN+AE SLT+ GI
Sbjct: 337 IRDTAAALVKANLRHTNVLPLYARLTVSEQNQIFKPHS-G-RNIVLATNVAETSLTVPGI 394
Query: 810 FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 869
YVIDPG A+ + Y+ + + L I P+SQASA QR+GR GR G C RLY+E Y++
Sbjct: 395 KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDDYKSR 454
Query: 870 MSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 926
T PEI R NL L M A+ + D+ +F F++ P + + + L + A++
Sbjct: 455 AEFTD-PEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGVRLLEEIAAVE 510
Score = 468 (169.8 bits), Expect = 1.4e-47, Sum P(2) = 1.4e-47
Identities = 121/349 (34%), Positives = 189/349 (54%)
Query: 732 GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKR 791
GDIL+FL G+ EI +L + N+ +LP+Y+ L Q++IF P G R
Sbjct: 325 GDILVFLNGEREIRDTAAALVKA------NLRHTNVLPLYARLTVSEQNQIFKPHS-G-R 376
Query: 792 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 851
+V+ATN+AE SLT+ GI YVIDPG A+ + Y+ + + L I P+SQASA QR+GR GR
Sbjct: 377 NIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGR 436
Query: 852 TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPPSPQA 911
G C RLY+E Y++ T PEI R NL L M A+ + D+ +F F++ P +
Sbjct: 437 VSEGICIRLYSEDDYKSRAEFTD-PEILRTNLATVILQMHALDLGDIANFPFVEAPDNRN 495
Query: 912 LISAMEQLYSLGALDE--------EGL-------LTKLGRKMAEFPLDPPLSKMLLASVD 956
+ + L + A++ +G LTK GR +A+FP+DP L+KM+++S++
Sbjct: 496 ITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMVVSSIE 555
Query: 957 LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVY----EAWK- 1011
GC ++IL I++ + + RP EKQ +D+K +F D ++LL ++ E K
Sbjct: 556 FGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFISLLNLWQYINEQKKD 615
Query: 1012 -AKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFT 1059
+N C F+ LR QD+ QL + + ++ + S F+
Sbjct: 616 LTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLKEQQITLTSIDYQFS 664
Score = 121 (47.7 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 26/82 (31%), Positives = 41/82 (50%)
Query: 1059 TKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKE 1118
T + +A+ +G H ++D Y+ +I P SAL ++ P W++ ELV T++
Sbjct: 691 TPVHQALLSGLLSHIGQQDENREYKG-ARGMKFFIFPGSALTKKSPKWLMSAELVETSRL 749
Query: 1119 YMREVTVIDPKWLVDLAPRFFK 1140
+ R IDP WL LA K
Sbjct: 750 FARMNAKIDPLWLEPLAQHLVK 771
Score = 37 (18.1 bits), Expect = 1.0e-67, Sum P(2) = 1.0e-67
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 980 REKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP 1018
RE + D +A D L+ + + W+ + + P
Sbjct: 892 RENEQLLDFSKAFLLNESSDELSTIEYPDVWQQDSITLP 930
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 420 (152.9 bits), Expect = 2.2e-76, Sum P(4) = 2.2e-76
Identities = 96/272 (35%), Positives = 150/272 (55%)
Query: 776 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 835
S S++F PPG RK+V+ATNIAE S+TID + YVID G K+ ++ + + ++
Sbjct: 516 SGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAE 575
Query: 836 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGI 895
+S+A+AKQR GRAGR PG CY LY + + +PEI R L L +K + +
Sbjct: 576 WVSKANAKQRKGRAGRVQPGHCYHLYN-GLRASLLDDYQLPEILRTPLEELCLQIKILRL 634
Query: 896 NDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLA 953
+ F MDPPS +A++ ++ L L ALD++ LT LG +A P++P + KM+L
Sbjct: 635 GGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILF 694
Query: 954 SVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLAVYEAWKA 1012
C D +LTI A + + F P K+ AD +R + + DHLT++ +E W+
Sbjct: 695 GALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEE 754
Query: 1013 KNFSG-----PWCFENFVQSRSLRRAQDVRKQ 1039
G +C+E F+ S +L+ +++ Q
Sbjct: 755 ARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 786
Score = 414 (150.8 bits), Expect = 2.2e-76, Sum P(4) = 2.2e-76
Identities = 93/197 (47%), Positives = 126/197 (63%)
Query: 514 LSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK--- 570
+ +Q R+ LP Y ++KEL+ + ++QV V+ GETG GKTTQVTQ++ + Y RGK
Sbjct: 198 IEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILD-NYIERGKGSA 256
Query: 571 --IGCTQPRRVAAMSVAKRVAEEFG--CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
I CTQPRR++A+SVA+RVA E C G GY IR + I Y T G++L
Sbjct: 257 CRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIIL 316
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+ + D LS S I+LDE HER + +DVL ++K L+ R DL++I+ SATL+AEKFS
Sbjct: 317 QWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSE 376
Query: 686 YFFNCNIFTIPGRTFPV 702
YF NC + IPG TFPV
Sbjct: 377 YFGNCPMIHIPGFTFPV 393
Score = 60 (26.2 bits), Expect = 2.2e-76, Sum P(4) = 2.2e-76
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 1091 VYIHPSSALFQRQP---DWVIYHELVMTTKEYMREVTVIDPKWLV 1132
V +HP S ++ +W+IYH + T+ Y+ + T + P L+
Sbjct: 853 VAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLL 897
Score = 58 (25.5 bits), Expect = 2.2e-76, Sum P(4) = 2.2e-76
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 711 ESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEI 744
E D +D +LI L I L E +G IL+FL G + I
Sbjct: 466 EDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNI 501
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 476 (172.6 bits), Expect = 2.5e-76, Sum P(5) = 2.5e-76
Identities = 110/292 (37%), Positives = 171/292 (58%)
Query: 724 QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 783
++ L + G IL+FL G EI+ AC G+ +++ L +LP++++L ++ Q ++F
Sbjct: 880 ELSLAQKSGGILIFLPGVAEINRAC--------GMLRSLNCLHVLPLHASLETKEQRKVF 931
Query: 784 DPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 843
P P GKRKVVVATN+AE S+TID I V+D G K+ Y+ + L T S A+ K
Sbjct: 932 VPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFASLAACK 991
Query: 844 QRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDF 903
QR GRAGR G+CY+LYT ++M+ PE++R+ L L+++AMGI D+ F
Sbjct: 992 QRRGRAGRVQAGECYKLYTRKL-ESQMAERPEPEMRRVPLEQLCLSVRAMGIADVRGFLA 1050
Query: 904 MDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 961
P P+A A+ L +G LD E L T LGR++A P D K+++ GC +
Sbjct: 1051 RAPTPPEAAAVEGAITMLRRMGCLDGEEL-TALGRQLAAIPADLRCGKLMVYGAVFGCLE 1109
Query: 962 EILTIIAMIQTGN-IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKA 1012
+ +++ A++ +G +F P +K+ QA + RA+F +GD LT L ++AW A
Sbjct: 1110 DCVSVAALLSSGRGVFVSPPDKRDQAREARARFAAGDGDLLTDLRAFQAWDA 1161
Score = 376 (137.4 bits), Expect = 2.5e-76, Sum P(5) = 2.5e-76
Identities = 85/205 (41%), Positives = 131/205 (63%)
Query: 519 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG-----KIGC 573
QRQ LP + L+ E+++ V ++QV ++ GETGSGK+TQ Q++ + Y RG I
Sbjct: 629 QRQKLPAWLLRDEIVRTVAEHQVTIIAGETGSGKSTQSVQFILDDLYG-RGLGHAANILV 687
Query: 574 TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILI--- 630
TQPRR++A+ +A RV++E ++G+EVGY IR E TGP T I ++T G+LLR + +
Sbjct: 688 TQPRRISALGLADRVSDERCSQVGQEVGYIIRGESRTGPKTRITFVTTGVLLRRLQVSGG 747
Query: 631 --DD---NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
+D +L+ S +++DE HER++ TD L +++ ++K+R DL+L++ SATLD+ F+
Sbjct: 748 RVEDVVASLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQRRDLKLVLMSATLDSATFAS 807
Query: 686 YFFNCNI----FTIPGRTFPVEILY 706
YF I I GRTFPV Y
Sbjct: 808 YFVQDGIRVGQVEIAGRTFPVTDYY 832
Score = 70 (29.7 bits), Expect = 2.5e-76, Sum P(5) = 2.5e-76
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 1087 ENQPVYIHPSSALFQRQ-----PDWVIYHELVMTTKEYMREVT 1124
EN V++HPSS LF Q ++ Y ++ T+K ++R++T
Sbjct: 1279 ENGRVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFVRDLT 1321
Score = 40 (19.1 bits), Expect = 2.5e-76, Sum P(5) = 2.5e-76
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 476 GERHLAQELRGVGLSAYDMPEWKKDAFGKAL 506
G ++ + LRG + Y M W +++ +
Sbjct: 533 GLAYMQESLRGEEMKIYFMVSWVQESINSII 563
Score = 39 (18.8 bits), Expect = 2.5e-76, Sum P(5) = 2.5e-76
Identities = 20/76 (26%), Positives = 31/76 (40%)
Query: 274 QEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKKISEDDALGNNPSGTRDGPTTRMGLS 333
+E +K +S SG L + D N G D ++ ++ L SG DG G
Sbjct: 388 REGAIKRLSQSGYSAELCKKVFDDNNG-DEGRAAEVLQEILL---TSGAVDGDAANGG-- 441
Query: 334 GIRIVEEDGVVPSRRP 349
+ E+D + R P
Sbjct: 442 --KQTEDDALESWREP 455
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 467 (169.5 bits), Expect = 8.5e-76, Sum P(2) = 8.5e-76
Identities = 123/366 (33%), Positives = 197/366 (53%)
Query: 707 TKQPESDYLDASLITVL--QIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE 764
T +PE +D LI L +I +G IL+FL G EEI + L + + +
Sbjct: 551 TIKPEE--VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDR--FFAHSAK 606
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
IIL ++S +P+E Q ++F+ P G RK+V+ATNIAE+++TID + YVID G K+ Y+
Sbjct: 607 FIILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYD 666
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT-SIPEIQRINL 883
P + +L + +S+A+AKQRAGRAGR G CY LY S R P +PE+ R+ +
Sbjct: 667 PYNDVSTLQSSWVSKANAKQRAGRAGRCQAGICYHLY--SKLRAASLPEYRVPEVMRMPV 724
Query: 884 GFTTLTMKAM----GINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 939
L +K + +ND L MDPP Q++ +A+ L +GAL E LT+LG+K
Sbjct: 725 DELCLQVKMLDPNCNVNDFLQ-KLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFG 783
Query: 940 EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP-----REKQAQADQKRAKFF 994
+ P+ P +SKM+ ++ + C D L + + F P R+K A A + A +
Sbjct: 784 QLPVHPRISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLY 843
Query: 995 QPEGDHLTLLAVYEAWKAKNFSGP---WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV 1051
DHL +A ++ WK SG +C + F+ ++R D+ ++L ++++ + +
Sbjct: 844 GDHSDHLATVAAFQCWKNAKASGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGV-I 902
Query: 1052 MSAGKN 1057
S+ N
Sbjct: 903 PSSSSN 908
Score = 392 (143.0 bits), Expect = 8.5e-76, Sum P(2) = 8.5e-76
Identities = 82/203 (40%), Positives = 128/203 (63%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG 569
+R I E R LPI + +I AV NQV+++ GETG GKTTQV QYL + + ++
Sbjct: 204 ERHFREIFEARSKLPIASFRDAIISAVESNQVVLIAGETGCGKTTQVPQYLLDHMWHSKK 263
Query: 570 ---KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
KI CTQPRR++A+SV+ R++ E G +G VGY +R + G ++ + + T+G+LLR
Sbjct: 264 EACKIICTQPRRISAISVSDRISWERGETIGRTVGYKVRLQSEGGRESSVVFCTNGILLR 323
Query: 627 EIL---IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 683
++ ++ ++ + I++DE HER ++D + +L+ L+ P LRLI+ SATLDAE+F
Sbjct: 324 VLIGKGVNSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSNPHLRLILMSATLDAERF 383
Query: 684 SGYFFNCNIFTIPGRTFPVEILY 706
S YF C + +PG T+PV +
Sbjct: 384 SEYFGGCPVVRVPGFTYPVRTFF 406
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 475 (172.3 bits), Expect = 2.0e-75, Sum P(5) = 2.0e-75
Identities = 120/341 (35%), Positives = 179/341 (52%)
Query: 708 KQPESDYLDASLITVLQIHLTEP--EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPEL 765
K+ D +D L+ L H+ + EG IL+FL G EI L + G L
Sbjct: 890 KRLNEDRIDYELLEELICHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWL 949
Query: 766 IILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNP 825
LP++S++ S Q ++F P G RKV+ ATNIAE S+TID + YVID G K+N YNP
Sbjct: 950 --LPLHSSIASSEQRKVFLRPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNP 1007
Query: 826 KQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGF 885
++ L S+V ISQA+A+QR GRAGR PG C+ LYT + M P +PE+ R+ L
Sbjct: 1008 QKKLSSMVEDWISQANARQRTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVE 1067
Query: 886 TTLTMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL 943
L +K +G+ + F ++PPS A+ SA+ L+ +GA++ + LT LG +A+ P+
Sbjct: 1068 LCLQIKLLGLGHIKPFLSRALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPV 1127
Query: 944 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG----- 998
D + KMLL GC IL+I A + + F P++++ D+ + G
Sbjct: 1128 DVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSD 1187
Query: 999 --------DHLTLLAVYEAW-KAKNFSGPWCFENFVQSRSL 1030
DHL ++ Y+ W K G + F +S+ L
Sbjct: 1188 LNNNDRQSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFL 1228
Score = 348 (127.6 bits), Expect = 2.0e-75, Sum P(5) = 2.0e-75
Identities = 84/198 (42%), Positives = 125/198 (63%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE----AGYTTRGKIGCTQ 575
R +LPI ++K ++Q + + VLVV GETGSGKTTQV Q++ + +G+ I CTQ
Sbjct: 611 RTALPISEVKNGILQHLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 670
Query: 576 PRRVAAMSVAKRVAEEFGCR----LGEE-VGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
PRR+AA+SVA+RVA+E C L + VGY +R E T + + T G+LLR++
Sbjct: 671 PRRIAAISVAQRVADE-RCESSPGLDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAG 729
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP-D-----LRLIVTSATLDAEKFS 684
D L+ + I++DE HER++ D L +LK L++++ D L++I+ SAT+DA+ FS
Sbjct: 730 DRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDADLFS 789
Query: 685 GYFFNCNIFTIPGRTFPV 702
YF +C + T GRT PV
Sbjct: 790 RYFGHCPVITAQGRTHPV 807
Score = 76 (31.8 bits), Expect = 2.0e-75, Sum P(5) = 2.0e-75
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 1051 VMSAG--KNFTKIRKAITAGFFFHAARKDPQ-EGYRTLVENQ-PVYIHPSS--ALFQR-Q 1103
++ AG N K IT F ++ Q + Y + + V+IHPSS + F+ Q
Sbjct: 1293 ILCAGLYPNIAANDKGITETTFNSLTKQGNQTKSYSAWYDGRREVHIHPSSINSNFKAFQ 1352
Query: 1104 PDWVIYHELVMTTKEYMREVTVIDP 1128
++++ E V T K Y+R+ T++ P
Sbjct: 1353 NPFLVFLEKVETNKVYLRDTTIVSP 1377
Score = 56 (24.8 bits), Expect = 2.0e-75, Sum P(5) = 2.0e-75
Identities = 12/54 (22%), Positives = 26/54 (48%)
Query: 997 EGDHLTLLAVYEAW------KAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1044
+ DHL ++ Y+ W + + +C F+ S +R +D+R Q +++
Sbjct: 1194 QSDHLLMMVAYDKWVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLL 1247
Score = 39 (18.8 bits), Expect = 2.0e-75, Sum P(5) = 2.0e-75
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 207 DDSGDRSGRYRGNEPELYQVYKGR 230
+DS D S R EP ++ KG+
Sbjct: 150 NDSTDSSVRVEEEEPAVFVRVKGK 173
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 499 (180.7 bits), Expect = 1.4e-74, Sum P(5) = 1.4e-74
Identities = 113/325 (34%), Positives = 179/325 (55%)
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
EG IL+FL G EI SL + + I++P++SAL E Q+ +F APPGK
Sbjct: 752 EGTILIFLPGFGEIQSVHDSLLDNAL-FSPRAGKFILVPLHSALSGEDQALVFKKAPPGK 810
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RK+V++TNIAE S+TID +V+D G K+ ++ + ++SL + +S+A+AKQR GRAG
Sbjct: 811 RKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAG 870
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL---TMKAMGINDLLS--FDFMD 905
R PG C LYT Y+ + +PEIQR+ L L T++ + LS + ++
Sbjct: 871 RVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETLE 930
Query: 906 PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 965
P+ +++ A+ +L +GALD E LT LG +A P+D + K++L C D +LT
Sbjct: 931 APTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQCLDSVLT 990
Query: 966 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAW----KAKNFSGP--W 1019
I A + + F P K+ +AD+ + F DHLT+L Y W + N++ +
Sbjct: 991 IAACLSNKSPFVSPLNKRTEADKCKRMFALGNSDHLTVLNAYRKWLDVARRGNYAASRNY 1050
Query: 1020 CFENFVQSRSLRRAQDVRKQLLSIM 1044
E+F+ +L D++ Q L ++
Sbjct: 1051 ASEHFLSLNTLETIADLKYQYLELL 1075
Score = 347 (127.2 bits), Expect = 1.4e-74, Sum P(5) = 1.4e-74
Identities = 78/202 (38%), Positives = 121/202 (59%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY---------- 565
I + R+ LP + + ++ + + V+V+ GETG GK+TQV Q++ + +
Sbjct: 446 IIDGRKQLPAFAEIERILALIESSPVVVISGETGCGKSTQVPQFILDNWFFRALQLPAKE 505
Query: 566 -TTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGML 624
+I CTQPRR++A+ VA+RVA E R+G+ VGY IR E+ T + + T G+L
Sbjct: 506 NLPHVEIICTQPRRLSAIGVAERVAAERLDRIGQLVGYQIRLENKVSQSTRLSFCTTGIL 565
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR + D L + +++DE HER+ +D L +LK L++ R DL++I+ SATL+A FS
Sbjct: 566 LRRLASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERKDLKVILMSATLNAALFS 625
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF + IPGRTFPV+ L+
Sbjct: 626 DYFGGAPVLDIPGRTFPVQQLF 647
Score = 55 (24.4 bits), Expect = 1.4e-74, Sum P(5) = 1.4e-74
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 1091 VYIHPSSALFQR---QPDWVIYHELVMTTKEYMREVTVIDPKWLVDLAPRFFKV 1141
V IHPSS Q Q ++++ E V T+ Y+R+ +++ +V A FKV
Sbjct: 1163 VKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIRDCSMLPLIAMVLFAGSDFKV 1216
Score = 40 (19.1 bits), Expect = 1.4e-74, Sum P(5) = 1.4e-74
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 204 RENDDSGDRSGRY 216
R ND GDR RY
Sbjct: 109 RGNDSDGDRLRRY 121
Score = 37 (18.1 bits), Expect = 1.4e-74, Sum P(5) = 1.4e-74
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 696 PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEP 730
PG+ E L + Y + S T I+L EP
Sbjct: 693 PGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEP 727
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 408 (148.7 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 112/344 (32%), Positives = 183/344 (53%)
Query: 718 SLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELI-ILPVYSALPS 776
SLI L + + + IL+F+ G +I C L + + + + + I +P++S+L
Sbjct: 884 SLILHLVNGVLKKDKSILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSSLSP 943
Query: 777 EMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITP 836
+ Q ++F+ AP G+ KVV+ATNIAE S+TI+ + V+D G Q +N G +
Sbjct: 944 KDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEW 1003
Query: 837 ISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGIN 896
S+AS +QRAGRAGRT G C++++T+S +++ PEI R +L L +K N
Sbjct: 1004 TSKASCRQRAGRAGRTSSGLCFKVFTKSM-ESQLQDQDTPEILRTSLQQLCLHVKLFLKN 1062
Query: 897 DLLSF--DFM----DPPSPQALISAMEQLYSLGAL----DEEGLLTKLGRKMAEFPLDPP 946
+ + DF+ +PPS + + S++ +L S+ AL ++ LT LG +A P+D
Sbjct: 1063 NKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVY 1122
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP-EGDHLTLLA 1005
+ KMLL C D ILTI A + + F P +K + K F P + DH TL+
Sbjct: 1123 IGKMLLFGCIFRCLDPILTIAATLNYKSPFLNPPDKTIRPMDK---FSSPNQSDHQTLIN 1179
Query: 1006 VYEAWKAKNFSG---PWCFENFVQSRSLRRAQDVRKQLLSIMDK 1046
Y +W+ G +C EN++ +LR QD++ Q + I+ +
Sbjct: 1180 AYNSWRKSIQDGNEYQFCRENYLSIPTLRTIQDLKLQFVEILSE 1223
Score = 403 (146.9 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 86/204 (42%), Positives = 135/204 (66%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT-RGK---IGC 573
++R+SLP++K KKE ++ + +NQV+V+ ETG GK+TQ+ QY+ E+ + +G I C
Sbjct: 620 KKRESLPVFKRKKEFLKCLQENQVVVITAETGCGKSTQIPQYILESFISQEKGSECNIVC 679
Query: 574 TQPRRVAAMSVAKRVAEEFGC-----RLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 628
TQPRR++A+ VA+RV+ E+ C +G VGY IR E T + + T G+LLR I
Sbjct: 680 TQPRRISAIGVAERVSYEWNCGTVENSIGGLVGYQIRNESKRSQSTRLLFCTTGILLRRI 739
Query: 629 LIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFF 688
L N+S S I++DE HER+ D L +L++++ +R DL++I+ SATL+A++ + YF
Sbjct: 740 LDVSNISDLSHIIIDEVHERSTDNDFLLIILREIISKRKDLKIILMSATLNAKQIANYF- 798
Query: 689 NC---NIFTIPGRTFPVEILYTKQ 709
C +IF+IPG TFPV+ +Y +
Sbjct: 799 KCTDDSIFSIPGFTFPVKNIYINE 822
Score = 70 (29.7 bits), Expect = 1.4e-72, Sum P(3) = 1.4e-72
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 1091 VYIHPSSALFQRQPDWV----IYHELVMTTKEYMREVTVIDPKWLV 1132
V+IHP S F ++ +WV IY++ V T+K ++ +T + P L+
Sbjct: 1330 VFIHPRSTNF-KEGEWVYPFIIYNDKVKTSKLFLHHITNLSPLTLL 1374
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 462 (167.7 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 125/354 (35%), Positives = 184/354 (51%)
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
+G IL+FL G EI S + + N + + LP++S L S Q IF AP GK
Sbjct: 820 DGSILIFLPGVLEIS----STIKEINKSSDN--KFMALPLHSGLTSAEQKSIFKTAPKGK 873
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RKVVV+TNIAE S+TI VID G +K ++ K L+ + SQA +QR GRAG
Sbjct: 874 RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAG 933
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF--DFMDPPS 908
R G CY LYT+ + M IPEI+R L L +K+MGI+++ F +D P
Sbjct: 934 RVTAGTCYHLYTKETFE-AMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPD 992
Query: 909 PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 968
+L A + L+ +GAL E L TKLG ++ P DP +K+L+ GC D LT+ A
Sbjct: 993 KSSLDKANQFLHEIGALQENSL-TKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAA 1051
Query: 969 MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSR 1028
+ TG+ F E++ + Q + KF +GD +++ Y A+ + N S + EN++
Sbjct: 1052 ISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAYMS-NKSKRFLTENYLSYT 1110
Query: 1029 SLRRAQDVRKQLLSIMDKY-----KLD--VMSAGKNFTKIRKAITAGFFFHAAR 1075
+++ R Q LS++ + KLD +N+ IR I F+ AR
Sbjct: 1111 TIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVAR 1164
Score = 347 (127.2 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 79/206 (38%), Positives = 123/206 (59%)
Query: 519 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG----KIGCT 574
QR LP + ++ L+ A++ QV ++ GETGSGK+TQV Q++ + Y+ +G KI CT
Sbjct: 569 QRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYS-KGDFTTKIICT 627
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN- 633
QPRR++A+S+A R+++E +G E GY IR E+ T +T I + T G+LLR +
Sbjct: 628 QPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKKN 687
Query: 634 --LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN-C 690
L I++DE HER++ D L LLK+++K P L++I+ SAT+ + F +F
Sbjct: 688 GVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPL 747
Query: 691 NIFTIPGRTFPVEILYTKQ--PESDY 714
I GRT+P++ Y ES+Y
Sbjct: 748 TPLHIEGRTYPIQDFYLDSILAESEY 773
Score = 47 (21.6 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1091 VYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVID 1127
V+IHPSS LF I E K+++ +V+ D
Sbjct: 1204 VFIHPSSVLFNDNNSDFILDE---NYKDFLSKVSTDD 1237
Score = 37 (18.1 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1106 WVIYHELVMTTKEYMREVT 1124
+V Y TTK Y+R++T
Sbjct: 1269 FVAYRSSHHTTKLYVRDLT 1287
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 462 (167.7 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 125/354 (35%), Positives = 184/354 (51%)
Query: 731 EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGK 790
+G IL+FL G EI S + + N + + LP++S L S Q IF AP GK
Sbjct: 820 DGSILIFLPGVLEIS----STIKEINKSSDN--KFMALPLHSGLTSAEQKSIFKTAPKGK 873
Query: 791 RKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAG 850
RKVVV+TNIAE S+TI VID G +K ++ K L+ + SQA +QR GRAG
Sbjct: 874 RKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAG 933
Query: 851 RTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF--DFMDPPS 908
R G CY LYT+ + M IPEI+R L L +K+MGI+++ F +D P
Sbjct: 934 RVTAGTCYHLYTKETFE-AMQKQPIPEIKRTRLENLYLVVKSMGISNVNEFLSSGLDAPD 992
Query: 909 PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 968
+L A + L+ +GAL E L TKLG ++ P DP +K+L+ GC D LT+ A
Sbjct: 993 KSSLDKANQFLHEIGALQENSL-TKLGNYISYLPTDPQSAKLLILGCIFGCLDICLTLAA 1051
Query: 969 MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSR 1028
+ TG+ F E++ + Q + KF +GD +++ Y A+ + N S + EN++
Sbjct: 1052 ISSTGSPFINSYEQRDKLKQIQKKFGNGQGDFISMANAYNAYMS-NKSKRFLTENYLSYT 1110
Query: 1029 SLRRAQDVRKQLLSIMDKY-----KLD--VMSAGKNFTKIRKAITAGFFFHAAR 1075
+++ R Q LS++ + KLD +N+ IR I F+ AR
Sbjct: 1111 TIKDITSTRSQYLSLLVELGFVNRKLDDSCNKNAENWPLIRGIIAGAFYPQVAR 1164
Score = 347 (127.2 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 79/206 (38%), Positives = 123/206 (59%)
Query: 519 QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG----KIGCT 574
QR LP + ++ L+ A++ QV ++ GETGSGK+TQV Q++ + Y+ +G KI CT
Sbjct: 569 QRSKLPAFAKQESLMTAINSGQVTLITGETGSGKSTQVVQFIMDDLYS-KGDFTTKIICT 627
Query: 575 QPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDN- 633
QPRR++A+S+A R+++E +G E GY IR E+ T +T I + T G+LLR +
Sbjct: 628 QPRRLSAVSLADRISKERVDEVGSETGYIIRGENKTSSNTRITFATTGVLLRMLQSSKKN 687
Query: 634 --LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN-C 690
L I++DE HER++ D L LLK+++K P L++I+ SAT+ + F +F
Sbjct: 688 GVLKNIGYILIDEVHERSVDADFLLILLKKMIKSMPKLKIILLSATISVDTFINFFEKPL 747
Query: 691 NIFTIPGRTFPVEILYTKQ--PESDY 714
I GRT+P++ Y ES+Y
Sbjct: 748 TPLHIEGRTYPIQDFYLDSILAESEY 773
Score = 47 (21.6 bits), Expect = 2.0e-70, Sum P(3) = 2.0e-70
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 1091 VYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVID 1127
V+IHPSS LF I E K+++ +V+ D
Sbjct: 1204 VFIHPSSVLFNDNNSDFILDE---NYKDFLSKVSTDD 1237
Score = 37 (18.1 bits), Expect = 2.2e-69, Sum P(3) = 2.2e-69
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 1106 WVIYHELVMTTKEYMREVT 1124
+V Y TTK Y+R++T
Sbjct: 1269 FVAYRSSHHTTKLYVRDLT 1287
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 427 (155.4 bits), Expect = 5.6e-70, Sum P(2) = 5.6e-70
Identities = 112/327 (34%), Positives = 178/327 (54%)
Query: 734 ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKV 793
+L+FL G EI +SL E M + +N + I ++S L S Q +F+ P G RK+
Sbjct: 906 VLVFLPGISEI-LRVKSLIEDMP-MFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKI 963
Query: 794 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 853
V++TNIAE +TI + VID G ++ YN ++ L L T +S+A+AKQR+GRAGR
Sbjct: 964 VLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQ 1023
Query: 854 PGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKA--MG-INDLLSFDFMDPPSPQ 910
G CY L+++ + + PEI R+NL L +K MG + D+L +DPPS
Sbjct: 1024 EGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLG-KALDPPSST 1082
Query: 911 ALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMI 970
+I A+E+L+ +GAL E LTKLG+ +++ P+D L K+L+ C D +I+AM+
Sbjct: 1083 NIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAML 1142
Query: 971 QTGNIFYRPREKQAQADQKRAKFFQPE--GDHLTLLAVYEAWKAKNFS--GP----WCFE 1022
G+ F + + + A++ R F + D + + Y AW+ S GP + E
Sbjct: 1143 TIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKE 1202
Query: 1023 NFVQSRSLRRAQDVRKQLLSIMDKYKL 1049
++ +L + ++ QLLS + KL
Sbjct: 1203 KYLNLEALSMTESLKIQLLSELKDMKL 1229
Score = 377 (137.8 bits), Expect = 5.6e-70, Sum P(2) = 5.6e-70
Identities = 95/269 (35%), Positives = 155/269 (57%)
Query: 457 LDSIPKDLNRPWEDPMPETGERHLAQELRGVG-LSAYDMP-EWKKDAFGKALTFGQRSKL 514
LDSI K ++ E P T + +A + +G S ++ P E + + + L K
Sbjct: 568 LDSIIK--SKELETPTSATTSKLMAP-MDNIGKFSGFERPPETLLNKWRQQLESESAEKF 624
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---I 571
+ R LP ++ +I AV+++Q+L++ G+TG GK+TQ+ +L E T GK I
Sbjct: 625 KVF--RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVKI 681
Query: 572 GCTQPRRVAAMSVAKRVAEEFG-----CRLGEEVGYAIRFED-CTGPDTVIKYMTDGMLL 625
T+PRR++A+S+A RV++E G R E VGY++R + CT P T + Y+T G L
Sbjct: 682 YVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCT-PLTPLTYVTTGTFL 740
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
R + + + + + +++DE HER+I +D+L + L+K+ P L++I+ SATL+AEKF
Sbjct: 741 RLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQL 800
Query: 686 YFFNCNIFTIPGRTFPVEILYTKQPESDY 714
YF N+ TIPG+T+PV Y + S +
Sbjct: 801 YFEGSNLITIPGKTYPVHRFYLEDILSQF 829
Score = 37 (18.1 bits), Expect = 3.2e-34, Sum P(2) = 3.2e-34
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 668 DLRLIVTSATLDAEKFSGY-FFN--CNIFTIPGRTFP 701
DL+ ++ +ATL A+ S F N I +TFP
Sbjct: 503 DLKTVLPTATLAADYISMIVLFRLMANFTKISLQTFP 539
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 407 (148.3 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 113/346 (32%), Positives = 189/346 (54%)
Query: 734 ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKV 793
IL+FL G EI ++L + + G ++ P++S + +E Q F P G RK+
Sbjct: 970 ILVFLPGIAEI----RTLNDLLLGDRSFQQNWLVYPLHSTIATEEQEAAFLVPPHGMRKI 1025
Query: 794 VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 853
V+ATNIAE +TI + VID G ++ ++ ++ + L+ T IS+A+AKQR GRAGR
Sbjct: 1026 VLATNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQ 1085
Query: 854 PGKCYRLYTESAYRNE--MSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPS 908
G C+ ++T+ YR++ M+ PE+ R++L + +K GI + LS +DPPS
Sbjct: 1086 QGLCFHMFTK--YRHDAIMADQQTPEMLRLSLQDLAIRVKICKIGGIEETLS-KALDPPS 1142
Query: 909 PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 968
+ + A++ L + AL + LT LG ++A PLD L K++L C D +T+ A
Sbjct: 1143 AKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFKCLDMAITVAA 1202
Query: 969 MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWK-----AKNFSGP---WC 1020
++ + + F P +++QAD R F + + D LT+ Y +WK A S +C
Sbjct: 1203 ILSSKSPFVAPFGQRSQADTVRLGFRRGDSDILTVYNAYLSWKRVCLAATGNSSQEFQFC 1262
Query: 1021 FENFVQSRSLRRAQDVRKQLL-SIMDKYKLDVMS-AGKNFTKIRKA 1064
+NF+ ++L +D++ QLL S++D L + KN +++R A
Sbjct: 1263 RKNFLSQQTLANIEDLKGQLLVSLVDSKFLSMTEDERKNLSRLRYA 1308
Score = 379 (138.5 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 91/248 (36%), Positives = 150/248 (60%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK---IGCTQP 576
R LP++ +++++ AV +QV++V GETG GK+TQV +L E +GK I CT+P
Sbjct: 688 RMQLPMWAFREQVLSAVDQHQVVIVCGETGCGKSTQVPSFLLEH-QLAQGKACKIYCTEP 746
Query: 577 RRVAAMSVAKRVAEEFG---CRLGEE---VGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
RR++A+S+A+RV+EE G LG VGY+IR E T +T + + T G+++R +
Sbjct: 747 RRISAISLARRVSEELGEGRNDLGTSRSLVGYSIRLEANTSRETRLVFATTGIVMRMLEG 806
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
++L + ++LDE HER+I +D L +LK+L+ RR DL++++ SAT+DA++FS Y
Sbjct: 807 SNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRKDLKVVLMSATVDADRFSNYLDGA 866
Query: 691 NIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQS 750
+ +PGRTFPV++ + + DA +T I P+ + L+ + E++ S
Sbjct: 867 PVLNVPGRTFPVQVNFLE-------DAVELTGYTIDQKVPQ-ERLVEIDEDAEVEPESSS 918
Query: 751 LYERMKGL 758
E +K L
Sbjct: 919 KTELLKSL 926
Score = 65 (27.9 bits), Expect = 2.3e-69, Sum P(3) = 2.3e-69
Identities = 24/97 (24%), Positives = 47/97 (48%)
Query: 1037 RKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQ--EGYRTLVENQPVYIH 1094
RKQ+ M + ++DV S +N + ++ F+ +D +G R + NQ + +H
Sbjct: 1315 RKQVFFEMPQ-RVDVNS--ENDLVSQAVLSWSFYPKLLVRDVAGGKGLRNVGNNQNISLH 1371
Query: 1095 PSSA-LFQRQPDWVIYHELVMTTKEYMR--EVTVIDP 1128
SS + W+ Y+ ++ +TK + E T ++P
Sbjct: 1372 RSSVNRGHNEIRWMSYYHMMQSTKSALNAHETTAVEP 1408
Score = 41 (19.5 bits), Expect = 4.5e-34, Sum P(3) = 4.5e-34
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 697 GRTFPVEILYTKQPESDYLDASLITVLQIHLTEP 730
GR V+I YT P + + L+ VL EP
Sbjct: 493 GRDPGVKISYTAIPATAFAHQHLVHVLWSKAQEP 526
Score = 38 (18.4 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 1028 RSLRRAQDVRKQLLSIMDKYKLD 1050
+SL+ + L+ MD+YK+D
Sbjct: 924 KSLKGYSTRTRNTLAQMDEYKID 946
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 399 (145.5 bits), Expect = 2.8e-69, Sum P(2) = 2.8e-69
Identities = 79/200 (39%), Positives = 133/200 (66%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR- 568
+R + RQSLP+++ ++E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 179 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 238
Query: 569 -GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 627
+I CTQPRR+AA++VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 239 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 298
Query: 628 ILIDDN-LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
++ D+ LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 299 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 358
Query: 687 FFNCNIFTIPGRTFPVEILY 706
F +C + I GR F V+ ++
Sbjct: 359 FGSCPVIYIQGRPFEVKEMF 378
Score = 394 (143.8 bits), Expect = 2.8e-69, Sum P(2) = 2.8e-69
Identities = 114/348 (32%), Positives = 183/348 (52%)
Query: 711 ESDYLDASLITVLQIHLTE--PEGDILLFLTGQEEI-DFACQSLYERMKGLGKNVPELII 767
+ + +D LI L ++ G IL+FL G +EI + L++ K N +
Sbjct: 599 DDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDD-KRFADNTHRYQV 657
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
++S + + Q ++ P G RK++++TNIAE S+T++ + +VID G K+ ++
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 717
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
+ L + IS+ASA QR GRAGR PG C+RL++ ++N M PE+ R+ L
Sbjct: 718 FVTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELC 776
Query: 888 LTMKAMG-IN-DLLSFDFMDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFPL 943
L K + +N + F P P ALI +A++ L ++ A+D LT+LG +A+ P+
Sbjct: 777 LHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPV 836
Query: 944 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRA-----KFFQPE- 997
+P L KM+L +V L C D ILTI + + F P QA QKRA K F
Sbjct: 837 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP----TQASQKRAAMLCRKRFTAGT 892
Query: 998 -GDHLTLLAVYEAW-KAKN--FSGPWCFENFVQSRSLRRAQDVRKQLL 1041
DH+ LL ++AW KA++ + +C +NF+ ++ +R QLL
Sbjct: 893 FSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLL 940
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 399 (145.5 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 79/200 (39%), Positives = 133/200 (66%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR- 568
+R + RQSLP+++ ++E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 179 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 238
Query: 569 -GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 627
+I CTQPRR+AA++VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 239 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 298
Query: 628 ILIDDN-LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
++ D+ LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 299 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 358
Query: 687 FFNCNIFTIPGRTFPVEILY 706
F +C + I GR F V+ ++
Sbjct: 359 FGSCPVIYIQGRPFEVKEMF 378
Score = 396 (144.5 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 115/349 (32%), Positives = 187/349 (53%)
Query: 711 ESDYLDASLITVLQIHLTEP--EGDILLFLTGQEEI-DFACQSLYERMKGLGKNVPELII 767
+ + +D LI L ++ G IL+FL G +EI + L++ K +N +
Sbjct: 599 DDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDD-KRFAENAHRYQV 657
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
++S + + Q ++ P G RK++++TNIAE S+T++ + +VID G K+ ++
Sbjct: 658 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 717
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
+ L + IS+ASA QR GRAGR PG C+RL++ ++N M PE+ R+ L
Sbjct: 718 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELC 776
Query: 888 LTMKAMG-INDLLSFDFM--DPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFP 942
L K + +N ++ DF+ P P ALI +A++ L ++ A+D LT+LG +A+ P
Sbjct: 777 LHTKLLAPVNCAIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLP 835
Query: 943 LDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRA-----KFFQPE 997
++P L KM+L +V L C D ILTI + + F P QA QKRA K F
Sbjct: 836 VEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP----TQASQKRAAMLCRKRFTAG 891
Query: 998 --GDHLTLLAVYEAW-KAKN--FSGPWCFENFVQSRSLRRAQDVRKQLL 1041
DH+ LL ++AW KA++ + +C +NF+ ++ +R QLL
Sbjct: 892 TFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLL 940
Score = 199 (75.1 bits), Expect = 7.1e-48, Sum P(3) = 7.1e-48
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
+PP + +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D IL
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 857
Query: 965 TIIAMIQTGNIFYRPRE-KQAQADQKRAKFFQPE--GDHLTLLAVYEAW-KAKN--FSGP 1018
TI + + F P + Q +A K F DH+ LL ++AW KA++ +
Sbjct: 858 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERA 917
Query: 1019 WCFENFVQSRSLRRAQDVRKQLLSIMDKYKL----------DVMSAGKNFTKIRKAITAG 1068
+C +NF+ ++ +R QLL + DV + +N+ ++ A+ AG
Sbjct: 918 FCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAG 977
Query: 1069 FFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1103
+ H D + + + V HP+S L Q Q
Sbjct: 978 MYPHLVHVDRENVVLAGPKEKKVRFHPTSVLSQPQ 1012
Score = 47 (21.6 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1084 TLVENQPVY--IHPSS---ALFQRQP-DWVIYHEL 1112
T V +QP Y I P++ A Q P DW+IY E+
Sbjct: 1005 TSVLSQPQYKKIPPANGQTAAIQALPTDWLIYDEM 1039
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 399 (145.5 bits), Expect = 3.0e-68, Sum P(3) = 3.0e-68
Identities = 79/200 (39%), Positives = 133/200 (66%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR- 568
+R + RQSLP+++ ++E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 195 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 254
Query: 569 -GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 627
+I CTQPRR+AA++VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 255 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 314
Query: 628 ILIDDN-LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
++ D+ LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 315 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 374
Query: 687 FFNCNIFTIPGRTFPVEILY 706
F +C + I GR F V+ ++
Sbjct: 375 FGSCPVIYIQGRPFEVKEMF 394
Score = 394 (143.8 bits), Expect = 3.0e-68, Sum P(3) = 3.0e-68
Identities = 115/349 (32%), Positives = 186/349 (53%)
Query: 711 ESDYLDASLITVLQIHLTEP--EGDILLFLTGQEEI-DFACQSLYERMKGLGKNVPELII 767
+ + +D LI L ++ G IL+FL G +EI + L++ K N +
Sbjct: 615 DDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDD-KRFADNTHRYQV 673
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
++S + + Q ++ P G RK++++TNIAE S+T++ + +VID G K+ ++
Sbjct: 674 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 733
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
+ L + IS+ASA QR GRAGR PG C+RL++ ++N M PE+ R+ L
Sbjct: 734 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELC 792
Query: 888 LTMKAMG-INDLLSFDFM--DPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFP 942
L K + +N ++ DF+ P P ALI +A++ L ++ A+D LT+LG +A+ P
Sbjct: 793 LHTKLLAPVNCTIA-DFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLP 851
Query: 943 LDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRA-----KFFQPE 997
++P L KM+L +V L C D ILTI + + F P QA QKRA K F
Sbjct: 852 VEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP----TQASQKRAAMLCRKRFTAG 907
Query: 998 --GDHLTLLAVYEAW-KAKN--FSGPWCFENFVQSRSLRRAQDVRKQLL 1041
DH+ LL ++AW KA++ + +C +NF+ ++ +R QLL
Sbjct: 908 TFSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLL 956
Score = 197 (74.4 bits), Expect = 1.2e-47, Sum P(3) = 1.2e-47
Identities = 61/215 (28%), Positives = 105/215 (48%)
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
+PP + +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D IL
Sbjct: 814 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 873
Query: 965 TIIAMIQTGNIFYRPRE-KQAQADQKRAKFFQPE--GDHLTLLAVYEAW-KAKN--FSGP 1018
TI + + F P + Q +A K F DH+ LL ++AW KA++ +
Sbjct: 874 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERA 933
Query: 1019 WCFENFVQSRSLRRAQDVRKQLLSIMDKYKL----------DVMSAGKNFTKIRKAITAG 1068
+C +NF+ ++ +R QLL + DV + +N+ ++ A+ AG
Sbjct: 934 FCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAG 993
Query: 1069 FFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1103
+ + D + T + + V HP+S L Q Q
Sbjct: 994 MYPNLVHVDRENVILTGPKEKKVRFHPTSVLSQPQ 1028
Score = 47 (21.6 bits), Expect = 3.0e-68, Sum P(3) = 3.0e-68
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 1084 TLVENQPVY--IHPSS---ALFQRQP-DWVIYHEL 1112
T V +QP Y I P++ A Q P DW+IY E+
Sbjct: 1021 TSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEM 1055
Score = 39 (18.8 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 611 GPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRP-DL 669
G D ++ + D +L + DN +Y V ML H+++ K+++K P +
Sbjct: 646 GYDEIVG-LRDRILFDDKRFADNTHRYQVFML--------HSNMQTSDQKKVLKNPPAGV 696
Query: 670 RLIVTSATL 678
R I+ S +
Sbjct: 697 RKIILSTNI 705
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 363 (132.8 bits), Expect = 4.2e-68, Sum P(4) = 4.2e-68
Identities = 81/207 (39%), Positives = 126/207 (60%)
Query: 511 RSKLS--IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR 568
+SK S +Q+ R SLP K ++++++ V+++ G TG GKTTQV Q++ + +
Sbjct: 167 KSKCSKELQKVRNSLPASKYCDQVLKSISSCNVVIISGGTGCGKTTQVPQFILDEAHENN 226
Query: 569 G--KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 626
++ TQPRR+AA+S+A+RVA E G +G VGY +R + DTV+ Y T G+LLR
Sbjct: 227 KHVRVMVTQPRRIAAISIAERVARERGEPIGRTVGYQVRLDSRRSDDTVLTYCTTGVLLR 286
Query: 627 EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDA--EKFS 684
+ D S + I++DE HER I+TD L L++ +K RPDL++I+ SAT++ + FS
Sbjct: 287 MLTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMRPDLKVILMSATIEGNMQLFS 346
Query: 685 GYFFN--CNIFTIPGRTFPVEILYTKQ 709
YF N ++ I R F V++ Y Q
Sbjct: 347 NYFENHSMDVIRIESRAFDVKVFYLDQ 373
Score = 331 (121.6 bits), Expect = 4.2e-68, Sum P(4) = 4.2e-68
Identities = 90/263 (34%), Positives = 142/263 (53%)
Query: 713 DYLDASLITVLQIHLTEPE-GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
DY+ L V+Q P G IL+FL G E+I +++ + K KN+ +I+LP++
Sbjct: 627 DYV--LLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAI-DCWKNSLKNMKNVIVLPLH 683
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S + S IF P RK+++ATNIAEAS+TI+ + +V+D G K+ ++ + L +
Sbjct: 684 SQMTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLST 743
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L + PI++++A QR+GRAGR G C RLYTE Y N M T I E++R + TL K
Sbjct: 744 LTVKPIARSNADQRSGRAGRVANGYCIRLYTEQEY-NSMPETQIAEMKRAAIYDVTLHAK 802
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGAL-----------DEEGLLTKLGR 936
L +F+ +PP ++++ A+ L +GA +EEGL
Sbjct: 803 LFAPKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEEA 862
Query: 937 KMAEFPLDPPLSKM--LLASVDL 957
+ +E P DP L+ + L+A + L
Sbjct: 863 ENSENPEDPELTDLGRLMARLPL 885
Score = 153 (58.9 bits), Expect = 4.2e-68, Sum P(4) = 4.2e-68
Identities = 41/135 (30%), Positives = 70/135 (51%)
Query: 927 EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN--IFYRPREKQA 984
E+ LT LGR MA PLDP LS+MLL + L C I+ ++A++ + + ++
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSEDRDL 928
Query: 985 QADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS--GPWCFENFVQSRSLRRAQDVRKQLLS 1042
Q+ K Q DHL + + + +KN S +C ++F+ ++R Q R+QLL
Sbjct: 929 QSKMKFEMAQQDLSDHLLYIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQGTRRQLLR 988
Query: 1043 IMDKYKLDVMSAGKN 1057
+ + KL +S ++
Sbjct: 989 ELVRAKLINISPNRD 1003
Score = 43 (20.2 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 14/67 (20%), Positives = 34/67 (50%)
Query: 741 QEEID-FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNI 799
+EE+D F ++ ++M ++ + +++P S E+Q ++ + P K V +I
Sbjct: 136 REEMDEFLTETQTKQMHTTKGHISDRMVIPPKSKCSKELQ-KVRNSLPASKYCDQVLKSI 194
Query: 800 AEASLTI 806
+ ++ I
Sbjct: 195 SSCNVVI 201
Score = 41 (19.5 bits), Expect = 4.2e-68, Sum P(4) = 4.2e-68
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 218 GNEPELYQVYKGRVSRV 234
G EP+ Y + RV+R+
Sbjct: 88 GREPDRYMILSKRVNRL 104
Score = 39 (18.8 bits), Expect = 3.1e-56, Sum P(4) = 3.1e-56
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 1038 KQLLSIMDKYKLDVMSAGKNFTKIRKAITAG---FFFHAARKDPQEGYRTLVENQPVYIH 1094
+ +L+++ + + S + + I+ I AG F +A + + +T ++P ++H
Sbjct: 1002 RDVLTVLTDHHFNQFS--QCWPMIQAVIAAGCYPFIGVSASESNLKKVQTF-NDKPAFLH 1058
Query: 1095 PSS 1097
PSS
Sbjct: 1059 PSS 1061
Score = 39 (18.8 bits), Expect = 2.7e-34, Sum P(4) = 2.7e-34
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 499 KDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 545
K F K L FG++ L + Y L ++IQ + D+ V I
Sbjct: 602 KTDFSK-LRFGEKYNLFYGSSSNNSVDYVLLDQVIQYLADSPVFGTI 647
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 448 (162.8 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 117/338 (34%), Positives = 180/338 (53%)
Query: 712 SDYLDASLITVLQIHLTEP--EGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILP 769
S +D L+ L H+ + EG IL+FL G EI+ L + G + L LP
Sbjct: 861 SAVVDYDLLEELICHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWL--LP 918
Query: 770 VYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGL 829
++S++ S Q ++F P G RKV++ATNIAE S+TI+ + YVID G K+N YNP + L
Sbjct: 919 LHSSIASTEQKKVFLRPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKL 978
Query: 830 DSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLT 889
S+V +S+A+A+QR GRAGR PG C+ LYT + M P +PE+ R+ L L
Sbjct: 979 SSMVEDWVSKANARQRMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLH 1038
Query: 890 MKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+K +G+ + F ++PPS A+ SA+ L+ +GAL+ + LT LG +A+ P+D +
Sbjct: 1039 IKLLGLGQIKPFLSKALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLI 1098
Query: 948 SKMLLASVDLGCSDEILTIIAMIQT-GNIFYRPREKQAQADQKRAKFFQP---------- 996
KMLL GC IL+I A + + F +++Q D+ +
Sbjct: 1099 GKMLLYGGIFGCLSPILSIAAFLSCCKSPFVYAKDEQ-NVDRVKLALLSDKLESSSNLNN 1157
Query: 997 ---EGDHLTLLAVYEAW-KAKNFSGPWCFENFVQSRSL 1030
+ DHL ++ YE W + + G E+F +S+ L
Sbjct: 1158 NDRQSDHLLMVVAYEKWVRILHEQGFKAAESFCESKFL 1195
Score = 333 (122.3 bits), Expect = 1.2e-67, Sum P(2) = 1.2e-67
Identities = 85/216 (39%), Positives = 130/216 (60%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE----AGYTTRGKIGCTQ 575
R +LPI ++KK+++Q + + VLVV GETGSGKTTQV Q++ + +G+ I CTQ
Sbjct: 594 RAALPISEVKKDILQKLKEKDVLVVCGETGSGKTTQVPQFILDDMIDSGHGGYCNIICTQ 653
Query: 576 PRRVAAMSVAKRVAEEFGCRL--GEE---VGYAIRFEDCTGPDTVIKYMTDGMLLREILI 630
PR A++VA+RVA+E C G + V Y +R ++ T + + T G+LLR+++
Sbjct: 654 PR---AITVAQRVADE-RCEPPPGFDNSVVAYQVRHQNARSDKTRLLFCTTGILLRKLVG 709
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR------PDLRLIVTSATLDAEKFS 684
D L + I++DE HER++ D L +LK L++++ P L++I+ SAT+DA +FS
Sbjct: 710 DTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAHQFS 769
Query: 685 GYFFNCNIFTIPGRTFPVEILYTKQ--PESDYLDAS 718
YF C I T GRT PV + + + YL AS
Sbjct: 770 RYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLAS 805
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 390 (142.3 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 79/201 (39%), Positives = 133/201 (66%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR- 568
+R + RQSLP+++ ++E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 179 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 238
Query: 569 -GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC-TGPDTVIKYMTDGMLLR 626
+I CTQPRR+AA++VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 239 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRRVSPKTLLTFCTNGVLLR 298
Query: 627 EILIDDN-LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
++ D+ LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F
Sbjct: 299 TLMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIR 358
Query: 686 YFFNCNIFTIPGRTFPVEILY 706
YF +C + I GR F V+ ++
Sbjct: 359 YFGSCPVIYIQGRPFEVKEMF 379
Score = 388 (141.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 109/323 (33%), Positives = 173/323 (53%)
Query: 734 ILLFLTGQEEI-DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRK 792
IL+FL G +EI + L++ K N + ++S + + Q ++ P G RK
Sbjct: 625 ILIFLPGYDEIVGLRDRILFDD-KRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 793 VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 852
++++TNIAE S+T++ + +VID G K+ ++ + L + IS+ASA QR GRAGR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 853 GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMG-IN-DLLSFDFMDPPSPQ 910
PG C+RL++ ++N M PE+ R+ L L K + +N + F P P
Sbjct: 744 RPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPP 802
Query: 911 ALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 968
ALI +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D ILTI
Sbjct: 803 ALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIAC 862
Query: 969 MIQTGNIFYRPREKQAQADQKRA-----KFFQPE--GDHLTLLAVYEAW-KAKN--FSGP 1018
+ + F P QA QKRA K F DH+ LL ++AW KA++ +
Sbjct: 863 TLAYRDPFVLP----TQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERA 918
Query: 1019 WCFENFVQSRSLRRAQDVRKQLL 1041
+C +NF+ ++ +R QLL
Sbjct: 919 FCEKNFLSQATMEIIIGMRTQLL 941
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 399 (145.5 bits), Expect = 8.4e-67, Sum P(3) = 8.4e-67
Identities = 79/200 (39%), Positives = 133/200 (66%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTR- 568
+R + RQSLP+++ ++E+++ + +N+V++++GETGSGKTTQ+ Q+L + +
Sbjct: 180 KRGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGI 239
Query: 569 -GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 627
+I CTQPRR+AA++VA+RVA E R+G+ +GY IR E P T++ + T+G+LLR
Sbjct: 240 PCRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRT 299
Query: 628 ILIDDN-LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
++ D+ LS + +++DE HER +D L L+ L+++ P L+LI++SA LD F Y
Sbjct: 300 LMAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRY 359
Query: 687 FFNCNIFTIPGRTFPVEILY 706
F +C + I GR F V+ ++
Sbjct: 360 FGSCPVIYIQGRPFEVKEMF 379
Score = 387 (141.3 bits), Expect = 8.4e-67, Sum P(3) = 8.4e-67
Identities = 112/348 (32%), Positives = 183/348 (52%)
Query: 711 ESDYLDASLITVLQIHLTEP--EGDILLFLTGQEEI-DFACQSLYERMKGLGKNVPELII 767
+ + +D LI L ++ G +L+FL G +EI + L++ K + +
Sbjct: 600 DDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDD-KRFADSTHRYQV 658
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
++S + + Q ++ P G RK++++TNIAE S+T++ + +VID G K+ ++
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 718
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
+ L + IS+ASA QR GRAGR PG C+RL++ ++N M PE+ R+ L
Sbjct: 719 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELC 777
Query: 888 LTMKAMG-IN-DLLSFDFMDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFPL 943
L K + +N + F P P ALI +A++ L ++ A+D LT+LG +A+ P+
Sbjct: 778 LHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPV 837
Query: 944 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRA-----KFFQPEG 998
+P L KM+L +V L C D ILTI + + F P QA QKRA K F
Sbjct: 838 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLP----TQASQKRAAMLCRKRFTAGA 893
Query: 999 --DHLTLLAVYEAW-KAKN--FSGPWCFENFVQSRSLRRAQDVRKQLL 1041
DH+ LL ++AW KA++ + +C +NF+ ++ +R QLL
Sbjct: 894 FSDHMALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLL 941
Score = 196 (74.1 bits), Expect = 7.9e-47, Sum P(3) = 7.9e-47
Identities = 61/215 (28%), Positives = 105/215 (48%)
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
+PP + +A++ L ++ A+D LT+LG +A+ P++P L KM+L +V L C D IL
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPIL 858
Query: 965 TIIAMIQTGNIFYRPRE-KQAQADQKRAKFFQPEG--DHLTLLAVYEAW-KAKN--FSGP 1018
TI + + F P + Q +A K F DH+ LL ++AW KA++ +
Sbjct: 859 TIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERA 918
Query: 1019 WCFENFVQSRSLRRAQDVRKQLLSIMDKYKL----------DVMSAGKNFTKIRKAITAG 1068
+C +NF+ ++ +R QLL + DV + +N+ ++ A+ AG
Sbjct: 919 FCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNTNSENWAVVKAALVAG 978
Query: 1069 FFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQ 1103
+ + D + T + + V HP+S L Q Q
Sbjct: 979 MYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQ 1013
Score = 40 (19.1 bits), Expect = 8.4e-67, Sum P(3) = 8.4e-67
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 1086 VENQPVY--IHPSS---ALFQRQP-DWVIYHEL 1112
V +QP Y I P++ A + P DW+IY E+
Sbjct: 1008 VLSQPQYKKIPPANGQAAAIKALPTDWLIYDEM 1040
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 681 (244.8 bits), Expect = 1.7e-66, P = 1.7e-66
Identities = 167/454 (36%), Positives = 250/454 (55%)
Query: 523 LPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAM 582
LP+ + +L+ A+ V+ G+GKTT+V L +A + +I +PRR+AA
Sbjct: 4 LPVDDVIPDLLTALEQRNAAVLQAPPGAGKTTRVPLALLDAPWLNGKRIIMLEPRRLAAT 63
Query: 583 SVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIML 642
+ A+ +A G G VGYAIRF+ T ++ +T+G+L R + D L ++
Sbjct: 64 NAARWMARSLGEEAGATVGYAIRFDRRVSARTRVEVVTEGILTRRLQSDPLLEGVGAVIF 123
Query: 643 DEAHERTIHTDVLFGLLKQL-VKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFP 701
DE HER+IH+D+ L + + R DLR+IV SAT+ A + + + T GR +P
Sbjct: 124 DEFHERSIHSDLALALCRDVQAGLREDLRIIVMSATMAAAPVAALLGDAPVITSEGRNYP 183
Query: 702 VEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKN 761
V + + + + L +++ ++I + E EGDIL FL G EI C L L +
Sbjct: 184 VALRHIPPNDRENLPSAVARAVRIAVRECEGDILAFLPGVGEIR-RCGQLLADDPPL--H 240
Query: 762 VPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQN 821
P +++P+Y LP Q R P P G+RKVV+AT IAE SLTI+G+ V+D G ++
Sbjct: 241 AP--LVVPLYGDLPFVEQERAILPVP-GRRKVVLATTIAETSLTIEGVRVVVDGGQTRRL 297
Query: 822 VYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRI 881
Y+P GL+ LV +S ASA QRAGRAGR GPG CYRL+ E + + PEI
Sbjct: 298 RYDPASGLNRLVTERVSAASATQRAGRAGRLGPGTCYRLWPEHD-QQALLAADPPEILIA 356
Query: 882 NLGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEF 941
+L L + G++D S ++DPP AL A L SL ALD +G++T+ GR+MAE
Sbjct: 357 DLAPLALDLAHWGVSDPASLAWLDPPPRGALEEARNLLKSLDALDGQGMITETGRRMAEL 416
Query: 942 PLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNI 975
PL P L+ MLL + + G + + A++ +I
Sbjct: 417 PLHPRLAHMLLRATERGPAPLACDVAALLTERDI 450
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 410 (149.4 bits), Expect = 2.5e-66, Sum P(4) = 2.5e-66
Identities = 111/321 (34%), Positives = 174/321 (54%)
Query: 732 GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKR 791
G I++FL G EI+ C L + N + ++LP++SAL E Q R+F GKR
Sbjct: 864 GSIIVFLPGVGEINKCCNLLANK-----SNEADFMVLPLHSALTPEDQKRVFKKYH-GKR 917
Query: 792 KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 851
KVVV+TNIAE S+TID ID G AK YNPK L+ + IS+A KQR GRAGR
Sbjct: 918 KVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGR 977
Query: 852 TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF--DFMDPPSP 909
G Y+L++++ Y N+M IPEI+RI L L++KAMGI D+ +F +D P
Sbjct: 978 VREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPL 1037
Query: 910 QALISAMEQLYSLGALDE-EGLLTKLGRKMAEFP-LDPPLSKMLLASVDLGCSDEILTII 967
AL A L ++G +DE + LT+LG+ ++ P +D K+L+ + GC+D + ++
Sbjct: 1038 PALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLV 1097
Query: 968 AMIQTGNI-FYRPREKQAQADQKRAKFFQPEGDHLTLLAVY-EAWKAKNFS--GPWCFEN 1023
+++ G + F E + + + K+ + GD +L + + +K K+ S + +N
Sbjct: 1098 SILGIGVLPFIGGFENREKIKKLLCKY-ESRGDLFAVLEIVRDYFKIKDSSIKRKYLRDN 1156
Query: 1024 FVQSRSLRRAQDVRKQLLSIM 1044
+ + + Q SI+
Sbjct: 1157 LLSYNKINEIKSSTAQYYSIL 1177
Score = 377 (137.8 bits), Expect = 2.5e-66, Sum P(4) = 2.5e-66
Identities = 93/277 (33%), Positives = 154/277 (55%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLA-----EAGYTTRG 569
S+Q R+ LP +K +K +I ++ N+V+++ GETGSGK+TQV Q++ E G +
Sbjct: 596 SMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKT 655
Query: 570 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
KI CTQPRR++A+ +A+RV++E GEEVGY IR + T T IK+MT G+L+R +
Sbjct: 656 KIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQ 715
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ + +++++DE HER+I TD++ L+K L+ R +++++ SAT++ + F +F
Sbjct: 716 NARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPG 775
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTE--------------PEGDIL 735
I GRTFP+ + + SD LD + + + P D
Sbjct: 776 LATCHIEGRTFPITDYFLEDILSD-LDFKIKREKALSYDDDSVDERNNDDQYLKPRADSK 834
Query: 736 LFLTGQEEIDFACQSL---YERMKGLGKNVPELIILP 769
F +GQ D CQ + ++R+K N ++ LP
Sbjct: 835 FFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLP 871
Score = 117 (46.2 bits), Expect = 4.3e-36, Sum P(3) = 4.3e-36
Identities = 74/311 (23%), Positives = 130/311 (41%)
Query: 845 RAGRAGRTGPG-KCY--RLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSF 901
RAGR R G K + LY M I I +L + M + LS
Sbjct: 974 RAGRV-REGLSYKLFSKNLYENDMI--SMPIPEIKRIPLESLYLSVKAMGIKDVKAFLST 1030
Query: 902 DFMDPPSPQALISAMEQLYSLGALDE-EGLLTKLGRKMAEFP-LDPPLSKMLLASVDLGC 959
PP P AL A L ++G +DE + LT+LG+ ++ P +D K+L+ + GC
Sbjct: 1031 ALDAPPLP-ALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGC 1089
Query: 960 SDEILTIIAMIQTGNI-FYRPREKQAQADQKRAKFFQPEGDHLTLLAVY-EAWKAKNFS- 1016
+D + +++++ G + F E + + + K+ + GD +L + + +K K+ S
Sbjct: 1090 TDISVLLVSILGIGVLPFIGGFENREKIKKLLCKY-ESRGDLFAVLEIVRDYFKIKDSSI 1148
Query: 1017 -GPWCFENFVQSRSLRRAQDVRKQLLSIMDK-------YKL----DVMSAGKNFTKIRKA 1064
+ +N + + + Q SI+ YK+ D+ +NF +R
Sbjct: 1149 KRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGFLPMDYKVGSISDLNRNERNFDILRAI 1208
Query: 1065 ITAGFFFHAARKD-PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREV 1123
+T F+ H AR P Y + + V P + + + W+ E +EY ++
Sbjct: 1209 LTGAFYPHIARVQLPDVKYLS-TSSGAVEKDPEAKMIKY---WIRSEEYQDKLEEYKTKI 1264
Query: 1124 TVIDPKWLVDL 1134
+ K VDL
Sbjct: 1265 SQETQK--VDL 1273
Score = 42 (19.8 bits), Expect = 2.5e-66, Sum P(4) = 2.5e-66
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 1076 KDPQEGYRTLVENQPV-----YIHPSSALF 1100
K QE + +E+ P+ +IHPSS LF
Sbjct: 1263 KISQETQKVDLEDLPLPATRAFIHPSSVLF 1292
Score = 39 (18.8 bits), Expect = 2.5e-66, Sum P(4) = 2.5e-66
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 495 PEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKL 528
P + K A GK L Q + + + ++ +Y++
Sbjct: 115 PTYDK-ASGKGLVIPQETPIEARHMASTIALYRI 147
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 393 (143.4 bits), Expect = 6.2e-66, Sum P(2) = 6.2e-66
Identities = 79/200 (39%), Positives = 133/200 (66%)
Query: 510 QRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG 569
+R + RQSLP+++ K+E+++ + +N+V++++GETGSGKTTQ+ Q+L + Y
Sbjct: 90 KRGESEYDSFRQSLPVFEKKEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCYENGV 149
Query: 570 --KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 627
+I CTQPRR+A ++VA+RVA E ++G+ VGY IR E P T++ + T+G+LLR
Sbjct: 150 PCRIFCTQPRRLAVIAVAERVAAERREKVGQTVGYQIRLESRVSPRTLLTFCTNGILLRT 209
Query: 628 ILIDDN-LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 686
++ D+ LS + +++DE HER +D L L+ +++ + +L+LI++SA LDA F Y
Sbjct: 210 LMAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQTNLKLIISSAALDANLFIKY 269
Query: 687 FFNCNIFTIPGRTFPVEILY 706
F +C + I GR F V+ ++
Sbjct: 270 FGSCPVIHIQGRPFEVKEMF 289
Score = 373 (136.4 bits), Expect = 6.2e-66, Sum P(2) = 6.2e-66
Identities = 108/348 (31%), Positives = 180/348 (51%)
Query: 711 ESDYLDASLITVLQIHLTEPE--GDILLFLTGQEEI-DFACQSLYERMKGLGKNVPELII 767
+ + +D LI L ++ G IL+FL G +EI + +++ + + + +
Sbjct: 510 DDEKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQV 569
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQ 827
++S + + Q + P G RK++++TNIAE S+T++ + +VID G K+ ++
Sbjct: 570 FMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALS 629
Query: 828 GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTT 887
+ L IS+ASA QR GRAGR PG C+ L++ ++N M PE++R+ L
Sbjct: 630 CVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQN-MLEFQTPELRRMPLQELC 688
Query: 888 LTMKAMG-IN-DLLSFDFMDPPSPQALI--SAMEQLYSLGALDEEGLLTKLGRKMAEFPL 943
L K + +N ++ F P P ALI +A++ L + A+D LT+LG +AE P+
Sbjct: 689 LHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPV 748
Query: 944 DPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP----REKQAQADQKR--AKFFQPE 997
+P L KM+L +V L C D ILTI + + F P +++ A +KR A F
Sbjct: 749 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFS-- 806
Query: 998 GDHLTLLAVYEAWKAKNFSGPW----CFENFVQSRSLRRAQDVRKQLL 1041
DH+ LL ++AW+ G W C +NF+ ++ +R QLL
Sbjct: 807 -DHMVLLRAFQAWQKARSDG-WERVFCEKNFLSQATMEIIIGMRTQLL 852
Score = 195 (73.7 bits), Expect = 5.4e-46, Sum P(3) = 5.4e-46
Identities = 70/260 (26%), Positives = 118/260 (45%)
Query: 905 DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL 964
DPP + +A++ L + A+D LT+LG +AE P++P L KM+L +V L C D IL
Sbjct: 710 DPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLKCLDPIL 769
Query: 965 TIIAMIQTGNIFYRP----REKQAQADQKR--AKFFQPEGDHLTLLAVYEAWKAKNFSGP 1018
TI + + F P +++ A +KR A F DH+ LL ++AW+ G
Sbjct: 770 TIACTLAYRDPFVLPTVASQKRAAMLCRKRLAAGTFS---DHMVLLRAFQAWQKARSDG- 825
Query: 1019 W----CFENFVQSRSLRRAQDVRKQLLSIMDKYKL----------DVMSAGKNFTKIRKA 1064
W C +NF+ ++ +R QLL + DV +N+ ++ A
Sbjct: 826 WERVFCEKNFLSQATMEIIIGMRTQLLGQLRALGFVRARGGADIRDVNVNSENWAVVKAA 885
Query: 1065 ITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVT 1124
+ AG + + D + T + + V HP+S L Q Q ++ + + V
Sbjct: 886 LVAGMYPNLVHVDRENLVLTGPKEKKVRFHPTSVLSQAQ------YKKIPPSNGQAAAVQ 939
Query: 1125 VIDPKWLV-DLAPRFFKVAD 1143
+ WL+ D R ++A+
Sbjct: 940 ALPTDWLIYDEMTRAHRIAN 959
Score = 38 (18.4 bits), Expect = 5.4e-46, Sum P(3) = 5.4e-46
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 908 SPQALISAMEQLYSLGA 924
S + +S +EQL S+GA
Sbjct: 425 SGRGFLSQVEQLISMGA 441
Score = 38 (18.4 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 14/75 (18%), Positives = 31/75 (41%)
Query: 474 ETGERHLAQELRGVGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELI 533
E E L LR G + +M ++KK+ + ++ ++ S P + ++ +
Sbjct: 284 EVKEMFLEDILRSTGYTNKEMIKYKKEKQREEKQQSTLTEWCCAQENSSNPESRRRRSVA 343
Query: 534 QAVHDNQVLVVIGET 548
+ +L G+T
Sbjct: 344 SVSEEYNLLDSSGDT 358
>UNIPROTKB|F1NH89 [details] [associations]
symbol:LOC768812 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00650000093246 OMA:LACEQDI EMBL:AADN02057061
EMBL:AADN02057062 IPI:IPI00683398 Ensembl:ENSGALT00000023318
Uniprot:F1NH89
Length = 764
Score = 673 (242.0 bits), Expect = 1.3e-65, P = 1.3e-65
Identities = 174/602 (28%), Positives = 305/602 (50%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE---AGYTTRGKIG 572
+ ++RQ LP++K++ ++++ +Q+++V G+ +GK++QV Q+ AE A G
Sbjct: 65 LMKERQELPVWKVRCAFMESLLHHQIVIVSGDAKTGKSSQVPQWCAEHCLAAGCRHGAAV 124
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
C+Q A+ +A R A+E +G EVGY + FE C +T+++Y TD ML RE++
Sbjct: 125 CSQAHGQVAVRLALRAADEMDVNIGHEVGYFVPFESCCTAETILRYCTDDMLQREMMSAP 184
Query: 633 NLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNI 692
L+ Y VI+LD+ HERT+ TDVL G+LK +++ RP LRL++ +A + K + + +
Sbjct: 185 LLNSYGVIILDDVHERTVPTDVLLGVLKHVLRARPALRLVILTAPHMSSKLQDFCGSVPL 244
Query: 693 FTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLY 752
+ E++YT D+ ++L + ++H T+ +GDI++FL +++ID A Q +
Sbjct: 245 IRVENE-HQAEVVYTCSMPKDHFLSALRLLFELHHTKEKGDIVIFLACEQDIDKAYQMIR 303
Query: 753 ERMKGLGKNVPELIILPVYSAL------PSEMQSRIFDPAPPGKRKVVVATNIAEASLTI 806
+ ++ ELI +P+Y P++ + + + +RKV++ T+ + + I
Sbjct: 304 QEQSNSNPDLGELIPVPLYPTRNDLIPKPNQDKQKCYQKY---RRKVLLTTSSGGSLIRI 360
Query: 807 DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 866
I +VID G ++ VYNP+ DS+ PIS+A A+ + GK + LY E
Sbjct: 361 KNITFVIDVGVERRKVYNPRIRADSVTTQPISKAQAEMHKQILSTSPSGKLFCLYPEEFT 420
Query: 867 RNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLSFDFMDPP-SPQALISAMEQLYSLGAL 925
EM P +IQ NL L +K M I +F+ P P SA + S G
Sbjct: 421 YKEMKPDFPAKIQESNLTSMVLFLKRMDIAGFRHCEFLSRPVCPP---SAKHGIRSTGKT 477
Query: 926 DE---EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF-YRPRE 981
+ +G ++ F + + L C E+L I ++ N F + P
Sbjct: 478 HQTRRQGSISAHSYLSQNFGILNKKGESLSVPCSFTCHTEVLPIHVLLHAPNCFLHTPSG 537
Query: 982 KQAQADQKRAKFFQPEGDHLTLLAVYEAWK--AKNFSGP------WCFENFVQSRSLRRA 1033
+ A KF P GDH TL+ V+ A++ + N +G WC F+ +LR A
Sbjct: 538 TEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNSAGQCCSNEKWCRNYFLSCSALRMA 597
Query: 1034 QDVRKQLLSIMDKYKLDVMS----AGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQ 1089
+ +R +L+ IM + +L + + + +N I+KA+ +G+F AR G ++ ++
Sbjct: 598 EMIRAELVEIMKRIELPISAPDFGSPENTLSIKKALLSGYFMQIARDVDGSGNYLMLTHR 657
Query: 1090 PV 1091
V
Sbjct: 658 QV 659
Score = 255 (94.8 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 67/217 (30%), Positives = 110/217 (50%)
Query: 959 CSDEILTIIAMIQTGNIF-YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWK--AKNF 1015
C E+L I ++ N F + P + A KF P GDH TL+ V+ A++ + N
Sbjct: 514 CHTEVLPIHVLLHAPNCFLHTPSGTEEIALTCWRKFSHPAGDHFTLINVFNAFREASTNS 573
Query: 1016 SGP------WCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMS----AGKNFTKIRKAI 1065
+G WC F+ +LR A+ +R +L+ IM + +L + + + +N I+KA+
Sbjct: 574 AGQCCSNEKWCRNYFLSCSALRMAEMIRAELVEIMKRIELPISAPDFGSPENTLSIKKAL 633
Query: 1066 TAGFFFHAARK-DPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHELVMTTKEYMRE 1122
+G+F AR D Y L Q +HP S+ + +R P+WV++HE ++ +R
Sbjct: 634 LSGYFMQIARDVDGSGNYLMLTHRQVAKLHPFSSYYYTRRSPEWVLFHEFSISEDNSIRV 693
Query: 1123 VTVIDPKWLVDLAPRFFKVADPTKMSKRKRQERIEPL 1159
V+ I P V+LAP+++ P SK QE I+ L
Sbjct: 694 VSEISPHLFVELAPQYYFSNLPPSESKDILQEVIDQL 730
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 384 (140.2 bits), Expect = 3.2e-65, Sum P(2) = 3.2e-65
Identities = 83/192 (43%), Positives = 124/192 (64%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIG----- 572
E R+ LPI ++ E++ A++DN V+++ G TG GKTTQ+ QY+ + Y G+ G
Sbjct: 379 EFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILD-DYICSGQGGYANIY 437
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC-TGPDTVIKYMTDGMLLREILID 631
TQPRR++A+SVA+RVA E +LG+ VGY++RFE P I + T G+LLR++ +
Sbjct: 438 VTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--E 495
Query: 632 DNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCN 691
L S I++DE HER +++D L +L+ +V PDL +I+ SAT+D KFS YF C
Sbjct: 496 AGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICP 555
Query: 692 IFTIPGRTFPVE 703
+ +PGR FPV+
Sbjct: 556 VLEVPGRAFPVQ 567
Score = 375 (137.1 bits), Expect = 3.2e-65, Sum P(2) = 3.2e-65
Identities = 100/347 (28%), Positives = 172/347 (49%)
Query: 711 ESDYLDASLITVLQIHLTEPE--GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
ESD + L+ L +H+ G IL+FL G I FA + G + + IL
Sbjct: 632 ESD-VSFELLEALLMHIKSKNIPGAILVFLPGWNLI-FALMKFLQNTNIFG-DTSQYQIL 688
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
P +S +P + Q ++F+P P G K++++TNIAE S+TID I +VID A+ ++
Sbjct: 689 PCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNN 748
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
L S S+ + +QR GRAGR PG C+ L + + ++ + PE+ R L L
Sbjct: 749 LTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQ-ALEDNLTPEMFRTPLHEMAL 807
Query: 889 TMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
T+K + + + F ++PP A+I A L + LD LT LGR +A P++P
Sbjct: 808 TIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPR 867
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQT--GNIFYRPREKQAQADQKRAKFFQPEGDHLTLL 1004
L KM++ GC+D ++ I+A + +F ++ A+ ++A DH+ ++
Sbjct: 868 LGKMMVLGAVFGCAD-LMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMI 926
Query: 1005 AVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQDVRKQLLSIMDK 1046
+ W+ + G +C +Q ++ D ++QLL ++ +
Sbjct: 927 VASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQ 973
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 397 (144.8 bits), Expect = 6.6e-65, Sum P(2) = 6.6e-65
Identities = 120/389 (30%), Positives = 196/389 (50%)
Query: 715 LDASLITVLQIHL-TEPEGD-----ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIIL 768
LD LI L + L T PE + IL+FL G EI + L + + II
Sbjct: 897 LDYQLIKKLLMKLATAPEMEYYSKAILVFLPGMAEI----RRLNDELLSEPTFQHGWIIH 952
Query: 769 PVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQG 828
++S++ S+ Q + F P G RK+V+ATNIAE +TI I VID G K ++ ++
Sbjct: 953 ALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDITAVIDAGKEKTMRFDERRQ 1012
Query: 829 LDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTL 888
L LV IS+A+AKQR GRAGR G C+ ++T+ + N ++ PE+ R++L L
Sbjct: 1013 LSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVL 1072
Query: 889 TMKAMGINDL--LSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPP 946
+K + ++ + +DPPS + + A++ L + AL LT LG+++A+ PLD
Sbjct: 1073 RVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVF 1132
Query: 947 LSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAV 1006
L K+++ C D ++I A++ + F AQ + R F + + D LT+
Sbjct: 1133 LGKLIIHGAFFKCLDAAISIAAILSCKSPFVNTMGSNAQKEAVRLGFRRGDSDLLTVYNA 1192
Query: 1007 YEAWK-AKNFSGP----WCFENFVQSRSLRRAQDVRKQLL-SIMDKYKLDVMSAGK-NFT 1059
Y AWK ++ G +C +NF+ ++L +DV+ QL+ SI D + + + K +
Sbjct: 1193 YCAWKRTRSTPGANEYAFCRKNFLSPQTLLNIEDVKLQLMVSIADAGLVTLDTNQKASLN 1252
Query: 1060 KIRKAITAGFFFHAARKDPQEGYRTLVEN 1088
+ R FF D TL+++
Sbjct: 1253 RARSTRQRHFFTTPPSHDTNNANDTLIQS 1281
Score = 360 (131.8 bits), Expect = 6.6e-65, Sum P(2) = 6.6e-65
Identities = 84/225 (37%), Positives = 136/225 (60%)
Query: 518 EQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRG--KIGCTQ 575
+ R LPI+ K E++ ++ ++ L++ ETGSGK+TQ+ ++ E + KI T+
Sbjct: 640 QSRMQLPIWTFKNEILNTLNSHRALIICSETGSGKSTQIPSFILEHEMLSGRPCKIYVTE 699
Query: 576 PRRVAAMSVAKRVAEEFGCR---LGEE---VGYAIRFEDCTGPDTVIKYMTDGMLLREIL 629
PRR++A+S+A+RV+EE G +G +G+A+R E P T + + T G+++R +
Sbjct: 700 PRRISAISLARRVSEELGESKNDVGTSRSLIGFAVRLESKVSPATRLVFATTGVVVRMLE 759
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
D+ + ++LDE HER+I +D L +L++L+++R DL+LI+ SAT+DA +FS Y
Sbjct: 760 RPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQDLKLILMSATVDANRFSTYLGG 819
Query: 690 CNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDI 734
+ IPGRTFPVE TK E DA I + Q TE E ++
Sbjct: 820 VPVLNIPGRTFPVE---TKFLE----DA--IELTQYRTTENESNV 855
Score = 62 (26.9 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 1026 QSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTL 1085
Q SL RA+ R++ D +A N T I+ I F+ ++ + G+R +
Sbjct: 1247 QKASLNRARSTRQRHFFTTPPSH-DTNNA--NDTLIQSVIAWSFYPKLLTREGK-GWRNI 1302
Query: 1086 VENQPVYIHPSS 1097
NQ V +HP+S
Sbjct: 1303 ANNQSVTLHPTS 1314
Score = 37 (18.1 bits), Expect = 5.9e-31, Sum P(2) = 5.9e-31
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 194 ARRYDNKYGDRENDDSGDRS 213
ARR + G+ +ND RS
Sbjct: 709 ARRVSEELGESKNDVGTSRS 728
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 387 (141.3 bits), Expect = 6.8e-64, Sum P(2) = 6.8e-64
Identities = 121/402 (30%), Positives = 202/402 (50%)
Query: 719 LITVLQIHLTEPE-GDILLFLTGQEEIDFACQSLYERMKGLGKNVP--ELIILPVYSALP 775
++++L++ L + + G ++++L G ++ SL R++ ++P ++ I+ ++S +
Sbjct: 447 IVSLLELLLRQGDAGAVIVYLPGYSDMT----SLLARLES---SLPREQITIILLHSQVD 499
Query: 776 SEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVIT 835
+ Q ++F P + K++++TNI + S+TI + YVID G AK Y+ L +T
Sbjct: 500 NSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLT 559
Query: 836 PISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG----FTTLTMK 891
ISQA AKQRAGRAGR G CYRLY M+ +IPEI R L T L
Sbjct: 560 WISQADAKQRAGRAGRVCHGNCYRLYDNDRMAR-MNLYTIPEIMRRTLDEICLLTKLAAP 618
Query: 892 AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 951
I + L+ +D P A++ + +L LG LDE +T LG +AE PL + K L
Sbjct: 619 DKKIENFLALA-LDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCL 677
Query: 952 LASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAK-FFQPEG--DHLTLLAVYE 1008
+ S+ L C D ++ I A + F E+ ++ Q+ ++ F +G D L ++ +YE
Sbjct: 678 VYSIYLRCLDSMIIIAAYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAVIKLYE 737
Query: 1009 AW---KAKNFSGPWCFENFVQSRSLRR----AQDVRKQLLSIM--DKYKLDVMSAGKNFT 1059
+ K K+ G +C NF+ ++ A +R + I + + S+ N T
Sbjct: 738 EFTNLKRKDI-GDFCERNFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFNNDT 796
Query: 1060 K-IRKAITAGFFFHAARKDPQEGYRTLVENQP-VYIHPSSAL 1099
IR A+TAG + A D + + + E P V + SS L
Sbjct: 797 NMIRLALTAGLYPKLAYMDRENKNQLVAEGDPLVQVSRSSCL 838
Score = 355 (130.0 bits), Expect = 6.8e-64, Sum P(2) = 6.8e-64
Identities = 77/196 (39%), Positives = 120/196 (61%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE--AGYTTRGKIG 572
+IQ +R+SLPIYK ++ ++ + +QVL++ G TGSGK+TQ+ QY+ E A + +I
Sbjct: 201 NIQHERRSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEHRAPVRIV 260
Query: 573 CTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDD 632
+QPRR+AA+SV++R+++E G G VGY IR +TV+ T G LLR + +D
Sbjct: 261 VSQPRRIAAISVSERISKERGEAPGTTVGYNIRMNRQCSSNTVLMLTTSGCLLRALAMDK 320
Query: 633 N--LSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
+ +++DEAHER + TD L K +++ P LRL++ SAT+D E S YF
Sbjct: 321 KSFFKNTTHLIIDEAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGG 380
Query: 691 NIFTIPGRTFPVEILY 706
+ + GR+F V I +
Sbjct: 381 TVMDVEGRSFEVSIYH 396
Score = 39 (18.8 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 704 ILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEE 743
+L+ +P+SD ++ ++ + P D+L + G E
Sbjct: 118 VLFISRPQSDGQQQYILCNTKLDICPPLLDVLGQMAGNVE 157
Score = 37 (18.1 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 268 DVVKRDQEVYVKVISVSGQKLSL 290
+V++RDQ + +K + SG+ L
Sbjct: 220 NVLQRDQVLIIKGATGSGKSTQL 242
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 626 (225.4 bits), Expect = 7.8e-64, Sum P(2) = 7.8e-64
Identities = 129/321 (40%), Positives = 189/321 (58%)
Query: 824 NPKQ-GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRIN 882
+PK GL+ L + +S+ A QR GRAGR G CYRLYTE + ++ + PEIQR N
Sbjct: 148 SPKDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-DKFEKMAAPEIQRCN 206
Query: 883 LGFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL---DEEGLLTKLGRKMA 939
L L + AM + ++L+FDFM PSP + +A+ QL LGAL D++ LT +GRKMA
Sbjct: 207 LASVMLQLLAMKVPNVLTFDFMSRPSPDHIEAAIAQLDLLGALEHKDDQLALTPIGRKMA 266
Query: 940 EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGD 999
FPL+P +K +L S C++EILTI++++ ++ Y P ++ + R KF EGD
Sbjct: 267 AFPLEPKFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFISSEGD 326
Query: 1000 HLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFT 1059
H+TLL +Y +K + WC ENFV S+++ +VR QL I K + +MS+ +
Sbjct: 327 HITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGDME 386
Query: 1060 KIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEY 1119
+R+ + F A P Y T +QPV IHPSS LF +P V+Y L+ T K Y
Sbjct: 387 SVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCY 446
Query: 1120 MREVTVIDPKWLVDLAPRFFK 1140
MR++ V+D +WL + AP +F+
Sbjct: 447 MRDLCVVDAEWLYEAAPDYFR 467
Score = 57 (25.1 bits), Expect = 7.8e-64, Sum P(2) = 7.8e-64
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 547
+++ QR+SLPI++ + +L+ + + V+IGE
Sbjct: 57 ALELQRRSLPIFRARGQLLAQLRNLDNAVLIGE 89
Score = 39 (18.8 bits), Expect = 6.2e-62, Sum P(2) = 6.2e-62
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 768 LPVYSALPSEMQSRIFDPAPPGKRKVVVAT 797
+P + LP + R PPG+R V++ T
Sbjct: 1 MPEEAGLPPAKRFRP-GSCPPGRRVVMLLT 29
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 388 (141.6 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 111/313 (35%), Positives = 163/313 (52%)
Query: 708 KQPESD-YLDASLIT--VLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE 764
KQ + + LD LIT VLQI G IL FL G +EI Q L E LG
Sbjct: 685 KQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM---LGSQNSR 741
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
++LPV+S +P Q IF PPG RK+V+ATNIAE S+TI+ I +V+D G K+ Y+
Sbjct: 742 YLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYD 801
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT-SIPEIQRINL 883
K + L +S+++ QR GRAGR G Y L+ S R + PT +PEI R L
Sbjct: 802 LKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRS--RLDKMPTYQVPEILRTPL 859
Query: 884 GFTTLTMKA-MGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAE 940
+ K M + F +D P +A+ A+ L +G LD+ LT LG+++A+
Sbjct: 860 ENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQ 919
Query: 941 FPLDPPLSK-MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG- 998
DP L+K ++LAS+ C +L I++ + T + F + +A+ D+ +A + G
Sbjct: 920 ISTDPRLAKAIVLASI-YRCLHPLLVIVSCL-TRDPFSSSLQNRAEVDKAKAVLSRESGS 977
Query: 999 DHLTLLAVYEAWK 1011
DHL + W+
Sbjct: 978 DHLAFVRAVAGWE 990
Score = 356 (130.4 bits), Expect = 1.0e-63, Sum P(2) = 1.0e-63
Identities = 81/209 (38%), Positives = 124/209 (59%)
Query: 506 LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE--- 562
L +R S QE LP+ K ++ A+ N V+V+ G+TG GKTT++ Q L E
Sbjct: 462 LALWKRRGSSWQESHP-LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYI 520
Query: 563 -AGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMT 620
G R + TQPRR++A+SVA+RVA+E G + + VGY +R E + + T
Sbjct: 521 LEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCT 580
Query: 621 DGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDA 680
G+LLR++ + +L S +++DE HER ++TD L LLK + K PDLRL++ SAT D
Sbjct: 581 VGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDN 640
Query: 681 EKFSGYFFNCNIFTIPGRTFPVEILYTKQ 709
++FS YF +C + +PG +PV+ Y ++
Sbjct: 641 QRFSHYFGDCPVVKVPGFMYPVKEYYLEE 669
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 627 (225.8 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 129/320 (40%), Positives = 188/320 (58%)
Query: 825 PKQ-GLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINL 883
PK GL+ L + +S+ A QR GRAGR G CYRLYTE + + ++PEIQR NL
Sbjct: 157 PKDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFE-KFDKMTVPEIQRCNL 215
Query: 884 GFTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL---DEEGLLTKLGRKMAE 940
L + AM + ++L+FDFM PSP + +A+ QL LGAL D++ LT +GRKMA
Sbjct: 216 ASVMLQLLAMKVPNVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAA 275
Query: 941 FPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDH 1000
FPL+P +K +L S C++EILTI++++ ++ + P ++ + R KF EGDH
Sbjct: 276 FPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFISSEGDH 335
Query: 1001 LTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVMSAGKNFTK 1060
+TLL +Y +K + WC ENFV S+++ +VR QL I K + + S+ +
Sbjct: 336 MTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVES 395
Query: 1061 IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYM 1120
+R+ + F A P Y T +QPV IHPSS LF +P V+Y EL+ T K YM
Sbjct: 396 VRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCYM 455
Query: 1121 REVTVIDPKWLVDLAPRFFK 1140
R++ VID +WL + AP +F+
Sbjct: 456 RDLCVIDAQWLYEAAPEYFR 475
Score = 54 (24.1 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 11/31 (35%), Positives = 22/31 (70%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVH--DNQVLV 543
+++ QR+SLPI++ + +L+ + DN VL+
Sbjct: 66 AVELQRRSLPIFQARGQLLAQLRNLDNAVLI 96
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 388 (141.6 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 111/313 (35%), Positives = 163/313 (52%)
Query: 708 KQPESD-YLDASLIT--VLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE 764
KQ + + LD LIT VLQI G IL FL G +EI Q L E LG
Sbjct: 685 KQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM---LGSQNSR 741
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
++LPV+S +P Q IF PPG RK+V+ATNIAE S+TI+ I +V+D G K+ Y+
Sbjct: 742 YLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYD 801
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT-SIPEIQRINL 883
K + L +S+++ QR GRAGR G Y L+ S R + PT +PEI R L
Sbjct: 802 LKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRS--RLDKMPTYQVPEILRTPL 859
Query: 884 GFTTLTMKA-MGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAE 940
+ K M + F +D P +A+ A+ L +G LD+ LT LG+++A+
Sbjct: 860 ENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQ 919
Query: 941 FPLDPPLSK-MLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG- 998
DP L+K ++LAS+ C +L I++ + T + F + +A+ D+ +A + G
Sbjct: 920 ISTDPRLAKAIVLASI-YRCLHPLLVIVSCL-TRDPFSSSLQNRAEVDKAKAVLSRESGS 977
Query: 999 DHLTLLAVYEAWK 1011
DHL + W+
Sbjct: 978 DHLAFVRAVAGWE 990
Score = 355 (130.0 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 81/209 (38%), Positives = 123/209 (58%)
Query: 506 LTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE--- 562
L +R S QE LP+ K ++ A+ N V+V+ G+TG GKTT++ Q L E
Sbjct: 462 LALWKRRGSSWQESHP-LPVDPHKDTILSAIEQNPVVVIAGDTGCGKTTRIPQLLLEHYI 520
Query: 563 -AGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMT 620
G R + TQPRR++A+SVA+RVA+E G + + VGY +R E + + T
Sbjct: 521 LEGRGARCNVVITQPRRISAISVAQRVAQELGPNMRKNVGYQVRLESKPPARGGALLFCT 580
Query: 621 DGMLLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDA 680
G+LLR++ + +L S +++DE HER ++TD L LLK + K PDLRL++ SAT D
Sbjct: 581 VGILLRKLQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKLNPDLRLVLMSATGDN 640
Query: 681 EKFSGYFFNCNIFTIPGRTFPVEILYTKQ 709
++FS YF C + +PG +PV+ Y ++
Sbjct: 641 QRFSHYFGGCPVVKVPGFMYPVKEYYLEE 669
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 366 (133.9 bits), Expect = 1.9e-63, Sum P(4) = 1.9e-63
Identities = 89/275 (32%), Positives = 151/275 (54%)
Query: 708 KQPESDYLDASLITVLQIHL-----TEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNV 762
+ +SD +D +I L +H+ + E IL+FL G E+I + L R L +N
Sbjct: 921 RDEQSDDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDIS-QTRELMRRHPML-RNE 978
Query: 763 PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNV 822
E +ILP++S++ ++Q+++F+ PP RK+V++TNIAE S+TI+ + YVID K
Sbjct: 979 NEFLILPLHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKY 1038
Query: 823 YNPKQGLDSLVITPISQASAKQRAGRAGRTGP-GKCYRLYTESAYRNEMSPTSIPEIQRI 881
+ ++ L ++S KQR GRAGR G CY + + Y N + + E++R+
Sbjct: 1039 HETQRDLTLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRY-NTLEEFQLSEMRRM 1097
Query: 882 NLGFTTLTMKAMGINDLLSF--DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMA 939
L L +K + + D++ F + ++PP +++ +A+ L LGAL+ LT LG +++
Sbjct: 1098 PLHELCLQVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLS 1157
Query: 940 EFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN 974
P+DP + KM++ C D ILTI + N
Sbjct: 1158 FIPVDPRIGKMIILGSYFRCLDPILTIASFSNQKN 1192
Score = 332 (121.9 bits), Expect = 1.9e-63, Sum P(4) = 1.9e-63
Identities = 70/185 (37%), Positives = 114/185 (61%)
Query: 516 IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAE----AGYTTRGKI 571
I ++R LPI+K + LI+++ +NQ+++++G+TG GKTTQ+ Q++ E +G+ I
Sbjct: 710 IYQKRTELPIFKQRSHLIESIKNNQIIIIMGDTGCGKTTQIPQFVIEDMIDSGHAPYCNI 769
Query: 572 GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTV-IKYMTDGMLLREILI 630
TQPRR++ + A+R+A E ++G+ VGY IRF++ T + T G+LL+ +
Sbjct: 770 VMTQPRRISVLGAAERMAYERLEKVGDTVGYQIRFDNVQPLGTSKLLVCTPGILLKRMYS 829
Query: 631 DDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNC 690
D L S + +DE HER IHTD L +LK+L+ +LR+I+ SAT+D S YF C
Sbjct: 830 DMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLADNNNLRVILMSATMDNSLVSAYFGTC 889
Query: 691 NIFTI 695
+ +
Sbjct: 890 PVIKL 894
Score = 108 (43.1 bits), Expect = 1.9e-63, Sum P(4) = 1.9e-63
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 974 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP---WCFENFVQSRSL 1030
N +Y +Q Q Q + + + + DHL+ L ++ W G +C ++F+ L
Sbjct: 1214 NSYYNNYYQQ-QPQQPKNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYC-QDFLSIPLL 1271
Query: 1031 RRAQDVRKQLLSIMDKYKLDVMSA---------------GKNFTKIRKAITAGFFFHAAR 1075
++ V+KQLLS ++ L +++A N IR I +G F + AR
Sbjct: 1272 QQILKVKKQLLSTIND--LGIINAQLRDGFVNNSFFNENSNNLDIIRAIICSGLFPNIAR 1329
Query: 1076 KDPQEGYRTLVENQPVYIHPSSALF 1100
+ + ++TL EN ++HPSS ++
Sbjct: 1330 QRKKREFKTLSEN--TFLHPSSIVY 1352
Score = 94 (38.1 bits), Expect = 5.4e-62, Sum P(4) = 5.4e-62
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 1057 NFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA---LFQR-QP--DWVIYH 1110
N IR I +G F + AR+ + ++TL EN ++HPSS LFQ P +WVI+
Sbjct: 1311 NLDIIRAIICSGLFPNIARQRKKREFKTLSEN--TFLHPSSIVYNLFQELNPKENWVIFE 1368
Query: 1111 ELVMTTKEYMREVTVI 1126
E T +++ +T I
Sbjct: 1369 EKFKTKLTFIKTITRI 1384
Score = 52 (23.4 bits), Expect = 2.6e-29, Sum P(4) = 2.6e-29
Identities = 19/78 (24%), Positives = 36/78 (46%)
Query: 861 YTESAYRNE-MSPTSI-PEIQRINLGFTT-----LTMKAMGINDLLSFDFMDPPSPQALI 913
Y + Y+ + P ++ PE+Q +L F L + G D DF+ P Q ++
Sbjct: 1216 YYNNYYQQQPQQPKNLYPELQSDHLSFLNIFNGWLQSRMDGTEDQYCQDFLSIPLLQQIL 1275
Query: 914 SAMEQLYSLGALDEEGLL 931
+QL L +++ G++
Sbjct: 1276 KVKKQL--LSTINDLGII 1291
Score = 38 (18.4 bits), Expect = 1.9e-63, Sum P(4) = 1.9e-63
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 199 NKYGDRENDDSGDRSGRYRGN 219
N Y N+D + + YRGN
Sbjct: 66 NNYNSY-NNDFNNSNNNYRGN 85
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 385 (140.6 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 80/192 (41%), Positives = 124/192 (64%)
Query: 520 RQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC----TQ 575
R+SLP+ K ++E++ AVH++ V+++ G TG GKTTQV QY+ + C TQ
Sbjct: 387 RESLPVKKFEEEIMHAVHNSPVVIIRGATGCGKTTQVPQYILDEYIRNDRAAQCNIVVTQ 446
Query: 576 PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREILIDDNL 634
PRR++A+SVA+RVA E G +G+ GY++RFE P + + T G+LLR++ + +
Sbjct: 447 PRRISAVSVAERVAFERGEEIGKSCGYSVRFESVLPRPHASMLFCTVGVLLRKL--ESGI 504
Query: 635 SQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFT 694
S +++DE HER I+TD L +L+ +++ P++R+I+ SAT+D F YFFNC I
Sbjct: 505 RGISHVIVDEIHERDINTDFLLVVLRDVIQAFPEIRVILMSATIDTSMFCEYFFNCPIIE 564
Query: 695 IPGRTFPVEILY 706
+ GRTFPV+ Y
Sbjct: 565 VFGRTFPVQEYY 576
Score = 361 (132.1 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 106/350 (30%), Positives = 172/350 (49%)
Query: 705 LYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPE 764
L K+ + ++A L+ ++ L P G +L+FL G I +A Q E G +
Sbjct: 629 LSEKETPLELIEA-LLKYIET-LNVP-GAVLVFLPGWNLI-YAMQKHLEMNPHFGSH--S 682
Query: 765 LIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN 824
ILP++S +P + Q ++FDP P G KV+++TNIAE S+TI+ + YVID K ++
Sbjct: 683 YCILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFT 742
Query: 825 PKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG 884
+ + S+ + +QR GRAGR PG C+ L +++ + +++ PEI R L
Sbjct: 743 SHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARF-DKLETHLTPEIFRTPLH 801
Query: 885 FTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEF 941
L++K + GI LS ++PP A+I A L L ALD LT LGR +A+
Sbjct: 802 EVALSIKLLRLGGIGHFLS-KAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKL 860
Query: 942 PLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPE--GD 999
P++P L KM++ +GC + + I F P + + + F D
Sbjct: 861 PIEPRLGKMMI----IGCIFYVGDALCTISAATCFPEPFISEGRRLGYVHRNFAGNRFSD 916
Query: 1000 HLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQDVRKQLLSIM 1044
H+ LL+V++AW G +C + +LR + + QL I+
Sbjct: 917 HVALLSVFQAWDDARMGGEDAETRFCEHKRLNMATLRMTWEAKVQLKDIL 966
Score = 42 (19.8 bits), Expect = 5.2e-63, Sum P(3) = 5.2e-63
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 24 SELETHLGFGDKVLAEFIT--ELGRNCETVDEFDSKLKENGAEMP 66
S +E + G K E + ++ N + V + S ++E G E+P
Sbjct: 257 SVIEPYSGLTKKKEGESVEPYQVNLNPDIVKQLQSTIQELGIELP 301
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 373 (136.4 bits), Expect = 9.0e-63, Sum P(2) = 9.0e-63
Identities = 79/198 (39%), Positives = 124/198 (62%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R +I ++R+ LP+ K + E+++A+ N V++V G TG GKTTQV Q++ +
Sbjct: 372 RDLQAILQERELLPVKKFESEILEAISQNPVVIVRGATGCGKTTQVPQFILDDFIQNDRA 431
Query: 571 IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLL 625
C TQPRR++A+SVA+RVA E G G+ GY++RFE P I + T G+LL
Sbjct: 432 AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 491
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
R++ + + S +++DE HER I+TD L +L+ +V+ P++R+++ SAT+D F
Sbjct: 492 RKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 549
Query: 686 YFFNCNIFTIPGRTFPVE 703
YFFNC I + GRT+PV+
Sbjct: 550 YFFNCPIIEVYGRTYPVQ 567
Score = 363 (132.8 bits), Expect = 9.0e-63, Sum P(2) = 9.0e-63
Identities = 108/367 (29%), Positives = 177/367 (48%)
Query: 689 NCNIFTIPGRTFPVEILYTKQPESDY-LDASLITVLQIHLTEPEGDILLFLTGQEEIDFA 747
NCN+ I G + + + + E+ + L +L+ ++ L P G +L+FL G I +
Sbjct: 603 NCNL--ICGDEYGLXMAQLNEKETPFELIEALLKYIET-LNVP-GAVLVFLPGWNLI-YT 657
Query: 748 CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTID 807
Q E G + + ILP++S +P E Q ++FDP P G KV+++TNIAE S+TI+
Sbjct: 658 MQKHLEMNPHFGNHRYQ--ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITIN 715
Query: 808 GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 867
+ YVID K ++ + + S+ + +QR GRAGR PG C+ L + + +
Sbjct: 716 DVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF- 774
Query: 868 NEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQLYSLGA 924
+ + PE+ R L L++K + GI L+ ++PP A+I A L L A
Sbjct: 775 DRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAVIEAEHTLRELDA 833
Query: 925 LDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQA 984
LD LT LGR +A+ P++P KM++ +GC + I I F P +
Sbjct: 834 LDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTISAATCFPEPFISEG 889
Query: 985 QADQKRAKFFQPE--GDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQDVR 1037
+ + F DH+ LL+V++AW G +C + +LR + +
Sbjct: 890 KRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAK 949
Query: 1038 KQLLSIM 1044
QL I+
Sbjct: 950 VQLKEIL 956
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 373 (136.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 78/194 (40%), Positives = 122/194 (62%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC- 573
S+ ++R+ LP+ K + E+++A+ N V+++ G TG GKTTQV QY+ + C
Sbjct: 383 SVLQERELLPVKKFEAEILEAISQNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECN 442
Query: 574 ---TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREIL 629
TQPRR++A++VA+RVA E G G+ GY++RFE P I + T G+LLR++
Sbjct: 443 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 501
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ + S +++DE HER I+TD L +L+ +V P++R+++ SAT+D F YFFN
Sbjct: 502 -EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN 560
Query: 690 CNIFTIPGRTFPVE 703
C I + GRTFPV+
Sbjct: 561 CPIIEVYGRTFPVQ 574
Score = 361 (132.1 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 108/370 (29%), Positives = 177/370 (47%)
Query: 689 NCNIFTI----PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
NCN+ P + L K+ + ++A L+ ++ L P G +L+FL G I
Sbjct: 610 NCNLICGDEYGPETKLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLI 666
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ Q E G + + ILP++S +P E Q ++FDP P G KV+++TNIAE S+
Sbjct: 667 -YTMQKHLENNSHFGSHRYQ--ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSI 723
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TI+ + YVID K ++ + + S+ + +QR GRAGR PG C+ L + +
Sbjct: 724 TINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRA 783
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQLYS 921
+ + + PE+ R L L++K + GI L+ ++PP A+I A L
Sbjct: 784 RF-DRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAVIEAEHTLRE 841
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPRE 981
L ALD LT LGR +A+ P++P KM++ +GC + + I F P
Sbjct: 842 LDALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAVCTISAATCFPEPFI 897
Query: 982 KQAQADQKRAKFFQPE--GDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQ 1034
+ + + F DH+ LL+V++AW SG +C + + +LR
Sbjct: 898 SEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTW 957
Query: 1035 DVRKQLLSIM 1044
+ + QL I+
Sbjct: 958 EAKVQLKEIL 967
Score = 40 (19.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 311 EDDALGNNPSGTRDGPTTRMGLS 333
+DDA N G GP T++ +S
Sbjct: 606 DDDANCNLICGDEYGPETKLSMS 628
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 373 (136.4 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 78/194 (40%), Positives = 122/194 (62%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC- 573
S+ ++R+ LP+ K + E+++A+ N V+++ G TG GKTTQV QY+ + C
Sbjct: 382 SVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECN 441
Query: 574 ---TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREIL 629
TQPRR++A++VA+RVA E G G+ GY++RFE P I + T G+LLR++
Sbjct: 442 IVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 500
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ + S +++DE HER I+TD L +L+ +V P++R+++ SAT+D F YFFN
Sbjct: 501 -EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFN 559
Query: 690 CNIFTIPGRTFPVE 703
C I + GRTFPV+
Sbjct: 560 CPIIEVYGRTFPVQ 573
Score = 362 (132.5 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 108/370 (29%), Positives = 177/370 (47%)
Query: 689 NCNIFTI----PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
NCN+ P + L K+ + ++A L+ ++ L P G +L+FL G I
Sbjct: 609 NCNLICGDEYGPETKLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLI 665
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ Q E G + + ILP++S +P E Q ++FDP P G KV+++TNIAE S+
Sbjct: 666 -YTMQKHLENNSHFGSHRYQ--ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSI 722
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TI+ + YVID K ++ + + S+ + +QR GRAGR PG C+ L + +
Sbjct: 723 TINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRA 782
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQLYS 921
+ + + PE+ R L L++K + GI L+ ++PP A+I A L
Sbjct: 783 RF-DRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAIIEAEHTLRE 840
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPRE 981
L ALD LT LGR +A+ P++P KM++ +GC + + I F P
Sbjct: 841 LDALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAVCTISAATCFPEPFI 896
Query: 982 KQAQADQKRAKFFQPE--GDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQ 1034
+ + + F DH+ LL+V++AW SG +C + + +LR
Sbjct: 897 SEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMSGEEAEIRFCEQKRLNMATLRMTW 956
Query: 1035 DVRKQLLSIM 1044
+ + QL I+
Sbjct: 957 EAKVQLKEIL 966
Score = 40 (19.1 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 311 EDDALGNNPSGTRDGPTTRMGLS 333
+DDA N G GP T++ +S
Sbjct: 605 DDDANCNLICGDEYGPETKLSMS 627
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 392 (143.0 bits), Expect = 4.5e-62, Sum P(2) = 4.5e-62
Identities = 114/339 (33%), Positives = 178/339 (52%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 676 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 731
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K +
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M+P +PEI R L L K
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMAPFQVPEILRTPLENLVLQAK 850
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 851 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 909
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 910 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 968
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ ++ + EN + + SLR + KQ
Sbjct: 969 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQ 1007
Score = 336 (123.3 bits), Expect = 4.5e-62, Sum P(2) = 4.5e-62
Identities = 76/202 (37%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + + ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 448 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGR 506
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 507 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 566
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 567 LRKLQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 626
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 627 RYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 392 (143.0 bits), Expect = 5.8e-62, Sum P(2) = 5.8e-62
Identities = 114/339 (33%), Positives = 178/339 (52%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 676 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 731
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K +
Sbjct: 732 SNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 791
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M+P +PEI R L L K
Sbjct: 792 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMAPFQVPEILRTPLENLVLQAK 850
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 851 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 909
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 910 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 968
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ ++ + EN + + SLR + KQ
Sbjct: 969 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQ 1007
Score = 335 (123.0 bits), Expect = 5.8e-62, Sum P(2) = 5.8e-62
Identities = 76/202 (37%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + + ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 448 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGR 506
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 507 GARCNVIITQPRRISAVSVAQRVSHELGPTLRRNVGFQVRLESKPPARGGALLFCTVGIL 566
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 567 LRKLQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 626
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 627 RYFGGCPVIKVPGFMYPVKEHY 648
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 390 (142.3 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 114/339 (33%), Positives = 177/339 (52%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 622 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 677
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K +
Sbjct: 678 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 737
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 738 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 796
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 797 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 855
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 856 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 914
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ ++ + EN + + SLR + KQ
Sbjct: 915 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQ 953
Score = 336 (123.3 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 77/203 (37%), Positives = 120/203 (59%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + + ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 394 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 452
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT--VIKYMTDGM 623
C TQPRR++A+SVA+RV+ E G L VG+ +R E P + + T G+
Sbjct: 453 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLES-KPPSRGGALLFCTVGI 511
Query: 624 LLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 683
LLR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+F
Sbjct: 512 LLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF 571
Query: 684 SGYFFNCNIFTIPGRTFPVEILY 706
S YF C + +PG +PV+ Y
Sbjct: 572 SRYFGGCPVIKVPGFMYPVKEHY 594
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 374 (136.7 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 78/198 (39%), Positives = 124/198 (62%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R ++ ++R+ LP+ K + E+++A+ N V+++ G TG GKTTQV Q++ +
Sbjct: 373 RDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRA 432
Query: 571 IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLL 625
C TQPRR++A+SVA+RVA E G G+ GY++RFE P I + T G+LL
Sbjct: 433 AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 492
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
R++ + + S +++DE HER I+TD L +L+ +V+ P++R+++ SAT+D F
Sbjct: 493 RKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 550
Query: 686 YFFNCNIFTIPGRTFPVE 703
YFFNC I + GRTFPV+
Sbjct: 551 YFFNCPIIEVYGRTFPVQ 568
Score = 354 (129.7 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 108/372 (29%), Positives = 177/372 (47%)
Query: 689 NCNIFTIPGRTFPVEI------LYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQE 742
NCN+ I G + E L K+ + ++A L+ + +++ P G +L+FL G
Sbjct: 604 NCNL--ICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNV--P-GAVLVFLPGWN 658
Query: 743 EIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEA 802
I + Q E G + + ILP++S +P E Q ++FDP P G K++++TNIAE
Sbjct: 659 LI-YTMQKHLEMNPHFGSHRYQ--ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAET 715
Query: 803 SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYT 862
S+TI+ + YVID K ++ + + S+ + +QR GRAGR PG C+ L +
Sbjct: 716 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 775
Query: 863 ESAYRNEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQL 919
+ + + PE+ R L L++K + GI L+ ++PP A+I A L
Sbjct: 776 RARFER-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAVIEAEHTL 833
Query: 920 YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP 979
L ALD LT LGR +A+ P++P KM++ +GC + I I F P
Sbjct: 834 RELDALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTISAATCFPEP 889
Query: 980 REKQAQADQKRAKFFQPE--GDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRR 1032
+ + + F DH+ LL+V++AW G +C + +LR
Sbjct: 890 FISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRM 949
Query: 1033 AQDVRKQLLSIM 1044
+ + QL I+
Sbjct: 950 TWEAKVQLKEIL 961
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 374 (136.7 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 78/198 (39%), Positives = 124/198 (62%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R ++ ++R+ LP+ K + E+++A+ N V+++ G TG GKTTQV Q++ +
Sbjct: 373 RDLQAVLQERELLPVKKFESEILEAISQNPVVIIRGATGCGKTTQVPQFILDDCIQNDRA 432
Query: 571 IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLL 625
C TQPRR++A+SVA+RVA E G G+ GY++RFE P I + T G+LL
Sbjct: 433 AECNIVVTQPRRISAVSVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLL 492
Query: 626 REILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 685
R++ + + S +++DE HER I+TD L +L+ +V+ P++R+++ SAT+D F
Sbjct: 493 RKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCE 550
Query: 686 YFFNCNIFTIPGRTFPVE 703
YFFNC I + GRTFPV+
Sbjct: 551 YFFNCPIIEVYGRTFPVQ 568
Score = 354 (129.7 bits), Expect = 6.4e-62, Sum P(2) = 6.4e-62
Identities = 108/372 (29%), Positives = 177/372 (47%)
Query: 689 NCNIFTIPGRTFPVEI------LYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQE 742
NCN+ I G + E L K+ + ++A L+ + +++ P G +L+FL G
Sbjct: 604 NCNL--ICGDEYGAETRISMAQLNEKETPFELIEALLLYIETLNV--P-GAVLVFLPGWN 658
Query: 743 EIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEA 802
I + Q E G + + ILP++S +P E Q ++FDP P G K++++TNIAE
Sbjct: 659 LI-YTMQKHLEMNPHFGSHRYQ--ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAET 715
Query: 803 SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYT 862
S+TI+ + YVID K ++ + + S+ + +QR GRAGR PG C+ L +
Sbjct: 716 SITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCS 775
Query: 863 ESAYRNEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQL 919
+ + + PE+ R L L++K + GI L+ ++PP A+I A L
Sbjct: 776 RARFER-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAVIEAEHTL 833
Query: 920 YSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRP 979
L ALD LT LGR +A+ P++P KM++ +GC + I I F P
Sbjct: 834 RELDALDANDELTPLGRILAKLPIEPRFGKMMI----MGCIFYVGDAICTISAATCFPEP 889
Query: 980 REKQAQADQKRAKFFQPE--GDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRR 1032
+ + + F DH+ LL+V++AW G +C + +LR
Sbjct: 890 FISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRM 949
Query: 1033 AQDVRKQLLSIM 1044
+ + QL I+
Sbjct: 950 TWEAKVQLKEIL 961
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 390 (142.3 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 114/339 (33%), Positives = 177/339 (52%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K +
Sbjct: 706 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 825 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 883
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 884 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ ++ + EN + + SLR + KQ
Sbjct: 943 VAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQ 981
Score = 336 (123.3 bits), Expect = 7.0e-62, Sum P(2) = 7.0e-62
Identities = 77/203 (37%), Positives = 120/203 (59%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + + ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 422 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 480
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT--VIKYMTDGM 623
C TQPRR++A+SVA+RV+ E G L VG+ +R E P + + T G+
Sbjct: 481 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLES-KPPSRGGALLFCTVGI 539
Query: 624 LLREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKF 683
LLR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+F
Sbjct: 540 LLRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERF 599
Query: 684 SGYFFNCNIFTIPGRTFPVEILY 706
S YF C + +PG +PV+ Y
Sbjct: 600 SRYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 390 (142.3 bits), Expect = 7.6e-62, Sum P(2) = 7.6e-62
Identities = 114/339 (33%), Positives = 177/339 (52%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 678 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 733
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+TI+ I +V+D G K+ Y+ K +
Sbjct: 734 SNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 852
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 853 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 911
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 912 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 970
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ ++ + EN + + SLR + KQ
Sbjct: 971 VSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQ 1009
Score = 336 (123.3 bits), Expect = 7.6e-62, Sum P(2) = 7.6e-62
Identities = 76/202 (37%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + + ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 450 RRRGPVWQEAPQLPVDPHRDTILNAIEQHPVVVIAGDTGCGKTTRIPQLLLER-YVTEGR 508
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 509 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 568
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 569 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 628
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 629 RYFGGCPVIKVPGFMYPVKEHY 650
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 387 (141.3 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 113/339 (33%), Positives = 176/339 (51%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K +
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 825 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 883
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 884 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ + + EN + + SLR + KQ
Sbjct: 943 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQ 981
Score = 336 (123.3 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 77/202 (38%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + I ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 422 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 480
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 481 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 540
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 541 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 600
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHY 622
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 387 (141.3 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 113/339 (33%), Positives = 176/339 (51%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 650 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 705
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K +
Sbjct: 706 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 765
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 766 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 824
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 825 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 883
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 884 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 942
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ + + EN + + SLR + KQ
Sbjct: 943 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQ 981
Score = 336 (123.3 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 77/202 (38%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + I ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 422 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 480
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 481 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 540
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 541 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 600
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 601 RYFGGCPVIKVPGFMYPVKEHY 622
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 387 (141.3 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 113/339 (33%), Positives = 176/339 (51%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 673 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 728
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K +
Sbjct: 729 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 788
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 789 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 847
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 848 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 906
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 907 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 965
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ + + EN + + SLR + KQ
Sbjct: 966 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQ 1004
Score = 336 (123.3 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 77/202 (38%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + I ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 445 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 503
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 504 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 563
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 564 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 623
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 624 RYFGGCPVIKVPGFMYPVKEHY 645
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 387 (141.3 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 113/339 (33%), Positives = 176/339 (51%)
Query: 715 LDASLITVLQIHLT---EPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 771
LD L+T L +H+ EP G IL FL G +EI Q L E LG + + +ILPV+
Sbjct: 678 LDLDLVTDLVLHIDARGEP-GGILCFLPGWQEIKGVQQRLQE---ALGMHESKYLILPVH 733
Query: 772 SALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 831
S +P Q IF P G RK+V+ATNIAE S+T++ I +V+D G K+ Y+ K +
Sbjct: 734 SNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSC 793
Query: 832 LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMK 891
L +S+A+ QR GRAGR G Y L+ S +M P +PEI R L L K
Sbjct: 794 LETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLE-KMVPFQVPEILRTPLENLVLQAK 852
Query: 892 AMGINDLLSFDFM----DPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPL 947
+ + + + +F+ D P+ +A+ A+ L +G LD+ LT LG+++A DP L
Sbjct: 853 -IHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRL 911
Query: 948 SKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEG-DHLTLL-A 1005
+K ++ + C +L +++ + T + F + +A+ D+ +A G DHL + A
Sbjct: 912 AKAIVLAAIFRCLHPLLVVVSCL-TRDPFSSSLQNRAEVDKVKALLSHDSGSDHLAFVRA 970
Query: 1006 V--YEA---WKAKNFSGPWCFENFVQSRSLRRAQDVRKQ 1039
V +E W+ + + EN + + SLR + KQ
Sbjct: 971 VAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQ 1009
Score = 336 (123.3 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 77/202 (38%), Positives = 119/202 (58%)
Query: 511 RSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGK 570
R + I ++ LP+ + ++ A+ + V+V+ G+TG GKTT++ Q L E Y T G+
Sbjct: 450 RRRGPIWQEAPQLPVDPHRDTILSAIEQHPVVVISGDTGCGKTTRIPQLLLER-YVTEGR 508
Query: 571 -IGC----TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCT-GPDTVIKYMTDGML 624
C TQPRR++A+SVA+RV+ E G L VG+ +R E + + T G+L
Sbjct: 509 GARCNVIITQPRRISAVSVAQRVSHELGPSLRRNVGFQVRLESKPPARGGALLFCTVGIL 568
Query: 625 LREILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFS 684
LR++ + +L S +++DE HER ++TD L LLK L + P LRL++ SAT D E+FS
Sbjct: 569 LRKLQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGLQRLNPALRLVLMSATGDNERFS 628
Query: 685 GYFFNCNIFTIPGRTFPVEILY 706
YF C + +PG +PV+ Y
Sbjct: 629 RYFGGCPVIKVPGFMYPVKEHY 650
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 371 (135.7 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 77/194 (39%), Positives = 123/194 (63%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC- 573
+I ++R+ LP+ K + E+++A+ N V+++ G TG GKTTQV Q++ + C
Sbjct: 380 AILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECN 439
Query: 574 ---TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREIL 629
TQPRR++A+SVA+RVA E G G+ GY++RFE P I + T G+LLR++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 498
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ + S +++DE HER I+TD L +L+ +V+ P++R+++ SAT+D F YFFN
Sbjct: 499 -EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557
Query: 690 CNIFTIPGRTFPVE 703
C I + GRT+PV+
Sbjct: 558 CPIIEVYGRTYPVQ 571
Score = 353 (129.3 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 108/368 (29%), Positives = 172/368 (46%)
Query: 689 NCNIFTI----PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
NCN+ P + L K+ + ++A L+ ++ L P G +L+FL G I
Sbjct: 607 NCNLICGDEYGPETRLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLI 663
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ Q E G + + ILP++S +P E Q ++FDP P G KV+++TNIAE S+
Sbjct: 664 -YTMQKHLEMNPHFGSHRYQ--ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSI 720
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TI+ + YVID K ++ + + S+ + +QR GRAGR PG C+ L + +
Sbjct: 721 TINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRA 780
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQLYS 921
+ + PE+ R L L++K + GI L+ ++PP A+I A L
Sbjct: 781 RFER-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAVIEAEHTLRE 838
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPRE 981
L ALD LT LGR +A+ P++P KM++ D I TI A F +
Sbjct: 839 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGK 898
Query: 982 KQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQDV 1036
+ + A DH+ LL+V++AW G +C + +LR +
Sbjct: 899 RLGYIHRNFAG--NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 956
Query: 1037 RKQLLSIM 1044
+ QL I+
Sbjct: 957 KVQLKEIL 964
Score = 43 (20.2 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 311 EDDALGNNPSGTRDGPTTRMGLS 333
+DDA N G GP TR+ +S
Sbjct: 603 DDDANCNLICGDEYGPETRLSMS 625
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 371 (135.7 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 77/194 (39%), Positives = 123/194 (63%)
Query: 515 SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGC- 573
+I ++R+ LP+ K + E+++A+ N V+++ G TG GKTTQV Q++ + C
Sbjct: 380 AILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECN 439
Query: 574 ---TQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTVIKYMTDGMLLREIL 629
TQPRR++A+SVA+RVA E G G+ GY++RFE P I + T G+LLR++
Sbjct: 440 IVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL- 498
Query: 630 IDDNLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 689
+ + S +++DE HER I+TD L +L+ +V+ P++R+++ SAT+D F YFFN
Sbjct: 499 -EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFN 557
Query: 690 CNIFTIPGRTFPVE 703
C I + GRT+PV+
Sbjct: 558 CPIIEVYGRTYPVQ 571
Score = 353 (129.3 bits), Expect = 1.7e-61, Sum P(2) = 1.7e-61
Identities = 108/368 (29%), Positives = 172/368 (46%)
Query: 689 NCNIFTI----PGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEI 744
NCN+ P + L K+ + ++A L+ ++ L P G +L+FL G I
Sbjct: 607 NCNLICGDEYGPETRLSMSQLNEKETPFELIEA-LLKYIET-LNVP-GAVLVFLPGWNLI 663
Query: 745 DFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASL 804
+ Q E G + + ILP++S +P E Q ++FDP P G KV+++TNIAE S+
Sbjct: 664 -YTMQKHLEMNPHFGSHRYQ--ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSI 720
Query: 805 TIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 864
TI+ + YVID K ++ + + S+ + +QR GRAGR PG C+ L + +
Sbjct: 721 TINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRA 780
Query: 865 AYRNEMSPTSIPEIQRINLGFTTLTMKAM---GINDLLSFDFMDPPSPQALISAMEQLYS 921
+ + PE+ R L L++K + GI L+ ++PP A+I A L
Sbjct: 781 RFER-LETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLA-KAIEPPPLDAVIEAEHTLRE 838
Query: 922 LGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPRE 981
L ALD LT LGR +A+ P++P KM++ D I TI A F +
Sbjct: 839 LDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGK 898
Query: 982 KQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGP-----WCFENFVQSRSLRRAQDV 1036
+ + A DH+ LL+V++AW G +C + +LR +
Sbjct: 899 RLGYIHRNFAG--NRFSDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEA 956
Query: 1037 RKQLLSIM 1044
+ QL I+
Sbjct: 957 KVQLKEIL 964
Score = 43 (20.2 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 311 EDDALGNNPSGTRDGPTTRMGLS 333
+DDA N G GP TR+ +S
Sbjct: 603 DDDANCNLICGDEYGPETRLSMS 625
WARNING: HSPs involving 99 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1176 1034 0.00081 123 3 11 22 0.40 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 349
No. of states in DFA: 624 (66 KB)
Total size of DFA: 453 KB (2214 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 88.08u 0.10s 88.18t Elapsed: 00:00:04
Total cpu time: 88.18u 0.10s 88.28t Elapsed: 00:00:04
Start: Fri May 10 01:15:06 2013 End: Fri May 10 01:15:10 2013
WARNINGS ISSUED: 2