Query 001049
Match_columns 1173
No_of_seqs 336 out of 2039
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 08:24:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001049.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001049hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cet_A Conserved archaeal prot 99.8 4.3E-20 1.5E-24 207.4 12.5 210 266-528 84-320 (334)
2 4ehu_A Activator of 2-hydroxyi 95.2 0.037 1.3E-06 60.6 8.5 70 451-528 179-250 (276)
3 3h1q_A Ethanolamine utilizatio 95.1 0.1 3.5E-06 56.7 11.5 65 461-529 205-271 (272)
4 2zf5_O Glycerol kinase; hypert 94.8 0.011 3.9E-07 70.6 3.0 84 7-96 2-93 (497)
5 1zbs_A Hypothetical protein PG 94.2 0.033 1.1E-06 61.7 4.9 69 455-529 209-280 (291)
6 1zc6_A Probable N-acetylglucos 94.1 0.051 1.7E-06 60.5 6.2 52 9-60 12-63 (305)
7 1hux_A Activator of (R)-2-hydr 94.0 0.089 3E-06 57.9 7.8 72 451-530 181-254 (270)
8 3l0q_A Xylulose kinase; xlylul 93.8 0.027 9.4E-07 68.3 3.4 89 4-99 1-97 (554)
9 3ifr_A Carbohydrate kinase, FG 93.3 0.032 1.1E-06 67.0 2.9 87 3-95 2-96 (508)
10 3hz6_A Xylulokinase; xylulose, 93.1 0.068 2.3E-06 64.2 5.4 84 6-95 3-93 (511)
11 1zxo_A Conserved hypothetical 92.8 0.036 1.2E-06 61.5 2.1 33 9-42 1-33 (291)
12 4apw_A ALP12; actin-like prote 92.8 0.098 3.4E-06 59.2 5.7 47 481-528 273-320 (329)
13 4e1j_A Glycerol kinase; struct 92.6 0.13 4.5E-06 61.9 6.9 79 1-85 20-105 (520)
14 2zgy_A Plasmid segregation pro 92.6 1.1 3.6E-05 50.2 13.8 66 460-528 250-317 (320)
15 3h3n_X Glycerol kinase; ATP-bi 92.5 0.055 1.9E-06 64.9 3.3 74 452-529 372-447 (506)
16 2itm_A Xylulose kinase, xylulo 92.1 0.058 2E-06 64.3 2.9 81 10-97 2-89 (484)
17 2qm1_A Glucokinase; alpha-beta 92.1 0.24 8.3E-06 55.2 7.8 53 7-60 5-57 (326)
18 3jvp_A Ribulokinase; PSI-II, N 91.1 0.16 5.5E-06 61.9 5.2 73 452-529 409-484 (572)
19 3djc_A Type III pantothenate k 91.0 0.22 7.5E-06 54.9 5.8 65 9-85 3-67 (266)
20 3i8b_A Xylulose kinase; strain 90.6 0.24 8.2E-06 59.5 6.1 80 4-96 1-85 (515)
21 2p3r_A Glycerol kinase; glycer 90.3 0.12 4E-06 62.1 3.1 74 452-529 370-445 (510)
22 3g25_A Glycerol kinase; IDP007 89.4 0.23 7.8E-06 59.4 4.6 74 452-529 373-448 (501)
23 3ezw_A Glycerol kinase; glycer 89.3 0.15 5.2E-06 61.4 2.9 73 452-528 371-445 (526)
24 2ch5_A NAGK protein; transfera 89.2 0.27 9.4E-06 55.3 4.8 53 8-60 6-59 (347)
25 3i33_A Heat shock-related 70 k 88.8 0.8 2.7E-05 52.6 8.4 74 453-528 319-396 (404)
26 2dpn_A Glycerol kinase; thermu 88.0 0.28 9.6E-06 58.5 4.0 74 452-529 367-442 (495)
27 3h6e_A Carbohydrate kinase, FG 87.8 0.27 9.3E-06 58.6 3.7 68 7-86 5-79 (482)
28 3ll3_A Gluconate kinase; xylul 87.8 0.34 1.2E-05 58.1 4.5 81 7-95 3-90 (504)
29 2w40_A Glycerol kinase, putati 87.6 0.28 9.6E-06 58.7 3.6 74 452-529 375-451 (503)
30 3qfu_A 78 kDa glucose-regulate 87.4 1.2 4E-05 50.9 8.5 75 452-528 310-388 (394)
31 2ews_A Pantothenate kinase; PA 86.6 1.4 4.8E-05 49.1 8.2 74 451-529 206-285 (287)
32 2e2o_A Hexokinase; acetate and 86.5 0.44 1.5E-05 52.6 4.2 52 9-60 3-55 (299)
33 1z6r_A MLC protein; transcript 86.0 1.1 3.8E-05 51.7 7.5 52 7-60 84-135 (406)
34 2gup_A ROK family protein; sug 86.0 0.5 1.7E-05 52.0 4.3 33 6-38 2-34 (292)
35 2i7n_A Pantothenate kinase 1; 85.4 1 3.4E-05 51.7 6.5 74 451-529 275-357 (360)
36 4htl_A Beta-glucoside kinase; 85.0 1.1 3.6E-05 49.7 6.4 33 6-38 2-34 (297)
37 4db3_A Glcnac kinase, N-acetyl 84.8 1 3.5E-05 50.6 6.2 50 8-59 24-73 (327)
38 3vgl_A Glucokinase; ROK family 84.2 0.86 3E-05 51.0 5.3 50 8-60 2-51 (321)
39 2d4w_A Glycerol kinase; alpha 84.2 0.69 2.3E-05 55.3 4.7 74 452-529 372-447 (504)
40 2aa4_A Mannac kinase, putative 83.9 0.77 2.6E-05 50.3 4.6 31 9-39 2-32 (289)
41 2ap1_A Putative regulator prot 83.5 1.2 4.1E-05 49.8 6.1 51 7-59 23-73 (327)
42 3lm2_A Putative kinase; struct 82.7 0.59 2E-05 50.2 3.0 32 4-39 2-33 (226)
43 3htv_A D-allose kinase, alloki 82.6 0.77 2.6E-05 51.3 4.0 52 6-59 5-56 (310)
44 1z05_A Transcriptional regulat 81.0 1.7 5.9E-05 50.6 6.4 52 7-60 107-158 (429)
45 3vov_A Glucokinase, hexokinase 80.9 0.92 3.1E-05 50.4 3.8 50 8-60 1-50 (302)
46 2uyt_A Rhamnulokinase; rhamnos 80.7 0.53 1.8E-05 55.9 1.9 73 452-529 362-436 (489)
47 3r8e_A Hypothetical sugar kina 80.3 1.1 3.6E-05 50.3 4.0 55 5-60 16-70 (321)
48 2hoe_A N-acetylglucosamine kin 79.9 1.4 4.7E-05 50.6 4.9 53 7-60 86-138 (380)
49 2yhw_A Bifunctional UDP-N-acet 79.3 0.92 3.1E-05 51.1 3.1 50 7-59 29-78 (343)
50 2h3g_X Biosynthetic protein; p 78.5 2.5 8.6E-05 46.5 6.2 66 9-85 1-66 (268)
51 1sz2_A Glucokinase, glucose ki 77.2 2.6 9.1E-05 47.2 6.1 48 7-58 13-61 (332)
52 3bex_A Type III pantothenate k 75.7 2.7 9.1E-05 45.7 5.4 63 9-85 4-66 (249)
53 2q2r_A Glucokinase 1, putative 75.1 3.1 0.00011 47.4 6.0 50 7-59 28-81 (373)
54 3epq_A Putative fructokinase; 72.5 2.7 9.1E-05 46.8 4.5 32 8-39 3-34 (302)
55 1saz_A Probable butyrate kinas 71.6 6 0.0002 45.5 7.3 38 456-496 268-305 (381)
56 1hux_A Activator of (R)-2-hydr 70.9 5.3 0.00018 43.6 6.4 31 8-38 3-33 (270)
57 1woq_A Inorganic polyphosphate 70.2 4.7 0.00016 43.6 5.7 53 8-61 12-66 (267)
58 3mcp_A Glucokinase; structural 67.6 5 0.00017 46.1 5.4 48 5-55 6-54 (366)
59 2ews_A Pantothenate kinase; PA 67.1 3.4 0.00012 45.9 3.8 30 8-39 20-49 (287)
60 2yhx_A Hexokinase B; transfera 66.8 7 0.00024 46.2 6.6 54 5-60 58-118 (457)
61 1jce_A ROD shape-determining p 65.8 5.6 0.00019 44.5 5.4 41 488-529 280-322 (344)
62 4ehu_A Activator of 2-hydroxyi 62.4 7.8 0.00027 41.9 5.6 23 8-30 1-23 (276)
63 4a2a_A Cell division protein F 59.6 5.2 0.00018 46.7 3.7 79 453-533 290-394 (419)
64 4bc3_A Xylulose kinase; transf 59.2 3.1 0.00011 50.1 1.7 75 7-87 9-102 (538)
65 2ych_A Competence protein PILM 56.8 5.8 0.0002 44.9 3.4 23 312-334 191-214 (377)
66 2fsj_A Hypothetical protein TA 56.5 7.2 0.00024 44.1 4.1 39 290-330 168-208 (346)
67 2itm_A Xylulose kinase, xylulo 53.9 24 0.00083 41.6 8.2 74 452-529 356-431 (484)
68 1bdg_A Hexokinase; phosphotran 46.7 20 0.00067 42.3 5.8 69 456-528 365-442 (451)
69 1cza_N Hexokinase type I; stru 44.2 16 0.00054 47.0 4.7 55 4-60 74-137 (917)
70 4b9q_A Chaperone protein DNAK; 41.4 13 0.00044 45.4 3.2 64 464-528 311-377 (605)
71 4gni_A Putative heat shock pro 41.0 10 0.00034 43.5 2.1 76 452-528 311-396 (409)
72 2fxu_A Alpha-actin-1, actin, a 39.8 18 0.00062 41.1 4.0 25 310-334 146-171 (375)
73 3d2f_A Heat shock protein homo 39.6 11 0.00039 46.6 2.4 63 465-528 313-378 (675)
74 1yuw_A Heat shock cognate 71 k 39.4 15 0.0005 44.4 3.3 64 465-528 309-375 (554)
75 1dkg_D Molecular chaperone DNA 39.1 13 0.00044 42.1 2.6 30 301-330 174-206 (383)
76 2kho_A Heat shock protein 70; 38.9 18 0.00061 44.2 3.9 61 467-528 314-377 (605)
77 3nav_A Tryptophan synthase alp 34.7 74 0.0025 34.8 7.7 116 162-304 125-241 (271)
78 1nbw_A Glycerol dehydratase re 34.0 85 0.0029 37.9 8.4 65 8-78 2-69 (607)
79 1unn_C POL IV, DNA polymerase 32.5 3E+02 0.01 25.4 12.4 92 536-638 10-102 (115)
80 2dpn_A Glycerol kinase; thermu 32.4 58 0.002 38.5 6.8 72 8-85 2-81 (495)
81 2zf5_O Glycerol kinase; hypert 32.1 71 0.0024 37.7 7.5 72 452-529 364-437 (497)
82 3js6_A Uncharacterized PARM pr 32.0 23 0.00077 40.3 3.1 23 311-333 183-206 (355)
83 1zbs_A Hypothetical protein PG 30.4 35 0.0012 37.2 4.2 20 314-333 2-22 (291)
84 2ivn_A O-sialoglycoprotein end 30.0 1.3E+02 0.0044 33.6 8.8 60 452-517 215-280 (330)
85 2w40_A Glycerol kinase, putati 29.9 78 0.0027 37.4 7.4 71 8-84 4-84 (503)
86 3cet_A Conserved archaeal prot 29.9 21 0.00073 40.3 2.3 20 10-30 129-148 (334)
87 2v7y_A Chaperone protein DNAK; 29.9 31 0.0011 41.0 3.9 75 452-528 269-346 (509)
88 1k8k_A ARP3, actin-like protei 29.1 28 0.00095 40.0 3.2 21 313-333 164-185 (418)
89 2d4w_A Glycerol kinase; alpha 27.7 80 0.0027 37.3 6.9 79 8-92 2-88 (504)
90 3ezw_A Glycerol kinase; glycer 27.6 72 0.0025 38.0 6.6 78 5-87 1-85 (526)
91 2jrf_A Tubulin polymerization- 27.2 39 0.0013 35.0 3.5 52 392-462 49-100 (184)
92 1wlm_A Protein CGI-38; structu 27.2 41 0.0014 33.8 3.6 54 391-463 55-108 (151)
93 3h3n_X Glycerol kinase; ATP-bi 26.6 87 0.003 37.1 7.0 85 4-93 1-92 (506)
94 2p3r_A Glycerol kinase; glycer 26.2 83 0.0028 37.3 6.7 75 6-85 1-82 (510)
95 3lif_A Putative diguanylate cy 26.2 40 0.0014 35.2 3.6 75 773-854 72-150 (254)
96 1pul_A Hypothetical protein C3 26.1 1E+02 0.0035 29.9 6.0 51 392-462 61-113 (125)
97 3g25_A Glycerol kinase; IDP007 25.4 82 0.0028 37.2 6.5 82 7-93 5-93 (501)
98 3ifr_A Carbohydrate kinase, FG 24.2 88 0.003 37.1 6.4 71 453-528 371-443 (508)
99 3h1q_A Ethanolamine utilizatio 23.8 1E+02 0.0035 32.7 6.3 33 7-39 27-59 (272)
100 3ixl_A Amdase, arylmalonate de 23.6 19 0.00064 38.7 0.3 97 174-276 53-152 (240)
101 3jvp_A Ribulokinase; PSI-II, N 23.0 1.4E+02 0.0048 35.9 8.0 87 4-95 1-106 (572)
102 3o8m_A Hexokinase; rnaseh-like 22.5 54 0.0018 39.0 4.0 23 5-27 77-99 (485)
103 2d0o_A DIOL dehydratase-reacti 22.3 81 0.0028 38.1 5.4 30 312-341 407-437 (610)
104 2x3e_A 3-oxoacyl-[acyl-carrier 21.9 1.2E+02 0.004 33.5 6.5 50 461-510 218-267 (331)
105 1nbw_A Glycerol dehydratase re 21.9 83 0.0028 38.1 5.4 30 312-341 409-439 (607)
106 1zxo_A Conserved hypothetical 21.8 32 0.0011 37.5 1.8 20 314-333 2-22 (291)
107 3i8b_A Xylulose kinase; strain 21.7 1.1E+02 0.0037 36.4 6.5 71 453-528 395-467 (515)
108 1o5k_A DHDPS, dihydrodipicolin 21.6 95 0.0032 34.4 5.6 53 171-223 30-87 (306)
109 4glq_A Methyl-accepting chemot 21.3 41 0.0014 33.8 2.3 94 745-851 15-124 (171)
110 2d0o_A DIOL dehydratase-reacti 20.4 1.5E+02 0.0051 35.9 7.0 68 8-81 2-73 (610)
111 1t6c_A Exopolyphosphatase; alp 20.3 76 0.0026 35.4 4.5 24 311-334 137-161 (315)
112 1mzj_A Beta-ketoacylsynthase I 20.2 1.3E+02 0.0043 33.4 6.3 50 461-510 225-274 (339)
113 3vnd_A TSA, tryptophan synthas 20.2 95 0.0033 33.9 5.1 116 162-304 123-239 (267)
114 3mdq_A Exopolyphosphatase; str 20.2 98 0.0034 34.4 5.4 23 312-334 131-154 (315)
No 1
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=99.81 E-value=4.3e-20 Score=207.44 Aligned_cols=210 Identities=17% Similarity=0.178 Sum_probs=168.3
Q ss_pred CceEEEEEcCCCcccccccc--ccceecccchhhHHHHHHhcccccCCCCEEEEecCCCceEEeeee-ceeeeee-----
Q 001049 266 KVNVLFMQSDGGLAPESRFS--GHKAVLSGPAGGVVGYSQTLFGLETEKPLIGFDMGGTSTDVSRYA-GSYEQVL----- 337 (1173)
Q Consensus 266 ~~~l~im~s~GG~~s~~~~~--pv~ti~SGPa~Gv~Ga~~l~~~~~g~~~~I~~DmGGTStDv~li~-G~~~~~~----- 337 (1173)
++|++|.+.|||.++.++++ |++++.|||+|++.-.+.. . .++.|.+|||||||||..|. |+|....
T Consensus 84 ~~~v~i~~~dGG~l~~~~a~~~p~~~aaanw~ASa~~~A~~-~----~~~~llvDIGsTTTDIipi~~G~pl~g~tD~eR 158 (334)
T 3cet_A 84 GSNISVFDSNGNFISLESAKTNNMKVSASNWCGTAKWVSKN-I----EENCILVDMGSTTTDIIPIVEGKVVAEKTDLER 158 (334)
T ss_dssp TTCEEEECSSSCEEETTHHHHCGGGTBCCSSHHHHHHHHHH-T----CSSEEEEEECSSCEEEEEEETTEECCCSSHHHH
T ss_pred CCceEEEecCCCcccHHHHhhCHHHHHhcCHHHHHHHHHHh-c----CCCEEEEEcCcchhhhhhhcCCeecccCChHHH
Confidence 46899999999999999874 9999999999999933332 1 14899999999999999996 9996532
Q ss_pred -----eeEEccEEEeecceeeEEEeccCCcEEEEeCCeEEECccccCCCCCcceeccCCccccchHHHHccccCCCCCCC
Q 001049 338 -----ETQIAGAIIQAPQLDINTVAAGGGSNLMFQLGAFRVGPESVGAHPGPVCYRKGGDLAVTDANLILGFVIPDYFPS 412 (1173)
Q Consensus 338 -----~~~i~g~~~~~p~~di~sIGaGGGSia~v~~G~l~VGP~SAGa~PGPacYg~GG~pTvTDA~lvLG~l~p~~fl~ 412 (1173)
-.+++.+++.++.+- +||+.||.|. +|+||. .+|.+||+++||.++++.+.-
T Consensus 159 L~~gElvy~G~~RT~V~aL~-~sv~~gG~~~--------~v~~E~--------------fATtaDa~~vLG~i~~~d~~~ 215 (334)
T 3cet_A 159 LMNHELLYVGTLRTPISHLG-NTISFKGVDT--------NVSSEY--------------FAITADISVVLEKVTTEEYTC 215 (334)
T ss_dssp HTTTSEECCCSSCCBGGGGC-SEEEETTEEE--------ECCCSS--------------CCBHHHHHHHTTSSCGGGCCS
T ss_pred hccCCcEEEccccChHHHHh-hhcccCCEEE--------eecccc--------------cccHHHHHHHhCCCCcccccC
Confidence 246689999999999 9999999988 788876 489999999999999887641
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHHhhccccCCCCCCCCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 001049 413 IFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMT--------VEDIALGFVNVANETMCRPIRQLTEMKGHET 484 (1173)
Q Consensus 413 ~~g~gG~~~Ld~~~a~~a~~~ia~~lg~~~~~~~~~~~gl~--------~eeaA~gi~~ia~~~Ma~air~~~~~rG~dp 484 (1173)
--+.| -...++.++++||+.++ .+ .++.|+.+++...+.+.++++++..+.+++
T Consensus 216 -~taDg----~~k~~~~~~~RLAr~vg------------~D~~~~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~~- 277 (334)
T 3cet_A 216 -DTPDG----KGTDKRSSLVRISKVLC------------SDLDQISEIDAENIAKNYYELWKELILENVENVAEKYGSK- 277 (334)
T ss_dssp -CCTTS----CCCSHHHHHHHHHHTTT------------CCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred -cCcCC----ccccHHHHHHHHHHHhC------------CChhhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 00112 12345677888999887 55 889999999999999999999999887666
Q ss_pred CCceEEEEcCchhhhHHHHHHHcCCCEEE-----E-CCCCCccchhcccc
Q 001049 485 RNHALACFGGAGPQHACAIARSLGMREVL-----I-HRFCGILSAYGMGL 528 (1173)
Q Consensus 485 rdf~LvafGGaGplha~~lA~~lGi~~Vi-----v-P~~~~v~sA~G~~~ 528 (1173)
.++.-||+ .-.+..+|++ ..++ + |.++.+++|+|++.
T Consensus 278 ---~vv~aG~G-~~L~~~la~~---~~~~~~~~~i~~~~s~vapA~avA~ 320 (334)
T 3cet_A 278 ---KVVITGLG-ENILKDALAD---FEVISVAERYGKDVSLATPSFAVAE 320 (334)
T ss_dssp ---EEEEESTT-HHHHHHHTTT---SEEEEHHHHHCHHHHHSHHHHHHHH
T ss_pred ---eEEEeCCc-HHHHHHHHhh---CCeeehhcccCcccccccCHHHHHH
Confidence 56777765 6666777766 3455 6 88899999999873
No 2
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=95.21 E-value=0.037 Score=60.64 Aligned_cols=70 Identities=20% Similarity=0.400 Sum_probs=48.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchhhhH--HHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 451 DMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHA--CAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 451 gl~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGplha--~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
+.+.++.+.++.+-+..++....+.. . +.++ ++..||..-.-+ -.+.+.+|.+ +++|++|...-|+|+++
T Consensus 179 ~~~~~di~a~~~~~v~~~l~~~~~~~---~--~~~~--vvl~GGva~n~~lr~~l~~~~g~~-~~~p~~p~~~~A~GAAl 250 (276)
T 4ehu_A 179 NAKIEDIVAGIHTSVAKRVSSLVKRI---G--VQRN--VVMVGGVARNSGIVRAMAREINTE-IIVPDIPQLTGALGAAL 250 (276)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH---C--CCSS--EEEESGGGGCHHHHHHHHHHHTSC-EECCSSGGGHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhc---c--cCCe--EEEecCccchHHHHHHHHHHHCCC-eeeCCCcchHHHHHHHH
Confidence 46789999999887766666554433 1 2222 444566544333 2578889986 89999999999999875
No 3
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=95.09 E-value=0.1 Score=56.68 Aligned_cols=65 Identities=18% Similarity=0.244 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 461 FVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 461 i~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
+++-..+.+.+.|+......+ ++. .++..||+. |...-.+.++||++ |.+|.+|....|+|+++.
T Consensus 205 ~~~~~~~~i~~~i~~~l~~~~-~~~--~ivL~GG~a~~~~l~~~l~~~l~~~-v~~~~~p~~a~a~Gaal~ 271 (272)
T 3h1q_A 205 VVRPVIEKMALIVKEVIKNYD-QTL--PVYVVGGTAYLTGFSEEFSRFLGKE-VQVPIHPLLVTPLGIALF 271 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTTSC-SSC--CEEEESGGGGSTTHHHHHHHHHSSC-CBCCSSGGGHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCC--EEEEECCccchhhHHHHHHHHhCCC-ccccCChHHHHHHHHHhc
Confidence 344445566666666665544 233 345557766 44566888999986 788999999999999863
No 4
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=94.77 E-value=0.011 Score=70.61 Aligned_cols=84 Identities=15% Similarity=0.152 Sum_probs=56.3
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccC--CCC------CCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeE
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPT------NYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEW 78 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~------~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~ 78 (1173)
+++.||||+|+|.+.++++|.+|+++...+.++. .|+ | ++.+.+.+..+++++... .+++.++|..
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~g~~~~~~~~~~~~~~p~~g~~e~d-~~~~~~~~~~~i~~~~~~-----~~~~~~~i~~ 75 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRESNIHGIGQYEFPQHYPRPGWVEHN-PEEIWDAQLRAIKDAIQS-----ARIEPNQIAA 75 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCCSTTCCEEC-HHHHHHHHHHHHHHHHHH-----HTCCGGGEEE
T ss_pred CcEEEEEecCCchhEEEEECCCCCEEEEEEeccceecCCCCcEEEC-HHHHHHHHHHHHHHHHHh-----cCCCcccEEE
Confidence 3578999999999999999877885566665431 111 1 133455555555554321 1344567999
Q ss_pred EEEehhHhhhHhhhcCCC
Q 001049 79 IRMGTTVATNALLERKGE 96 (1173)
Q Consensus 79 i~hGTT~atNAllerkg~ 96 (1173)
|-++++..+..++.++|.
T Consensus 76 Igis~~~~~~v~~D~~G~ 93 (497)
T 2zf5_O 76 IGVTNQRETTLVWDKDGK 93 (497)
T ss_dssp EEEEECSSCEEEECTTCC
T ss_pred EEEecCCCcEEEECCCCC
Confidence 999998888877777664
No 5
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=94.17 E-value=0.033 Score=61.71 Aligned_cols=69 Identities=6% Similarity=-0.156 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchhhh-HHHHHHHcC--CCEEEECCCCCccchhccccc
Q 001049 455 EDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQH-ACAIARSLG--MREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 455 eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGplh-a~~lA~~lG--i~~VivP~~~~v~sA~G~~~a 529 (1173)
++.|..|++-+.+.++..| . ...-+||. .+.+||+=..+ ...+-+.+. ..++..|..+++.-|.=+++.
T Consensus 209 D~~A~~i~~~~~~~La~~i-~--~~~~~~p~---~vvlgGGv~~~~~~~l~~~l~~~~~~i~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 209 IPAVYSLVQNSFDDFLVRN-V--LRYNRPDL---PLHFIGSVAFHYREVLSSVIKKRGLTLGSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp SHHHHHHHHHHHHHHHHHH-T--GGGCCTTS---CEEEESHHHHHTHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH-h--cccCCCCc---eEEEECchHHhhHHHHHHHHHHcCCeecccCcCHHHHHHHHHHh
Confidence 3788999999999999999 3 22223674 34456642111 133444441 234667777777766654443
No 6
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=94.13 E-value=0.051 Score=60.54 Aligned_cols=52 Identities=13% Similarity=-0.006 Sum_probs=34.1
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
|.||||+|||+|-++++|.+|+++...+.+++.+....+.+++.+..+++++
T Consensus 12 ~~lGiDiGgT~i~~~l~d~~G~il~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 63 (305)
T 1zc6_A 12 YLIGVDGGGTGTRIRLHASDGTPLAMAEGGASALSQGIAKSWQAVLSTLEAA 63 (305)
T ss_dssp EEEEEEECSSCEEEEEEETTCCEEEEEEESCCCGGGCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCccceEEEEEcCCCCEEEEEeCCCCCcccCHHHHHHHHHHHHHHH
Confidence 8899999999999999987787444555543322222234555555555554
No 7
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=94.02 E-value=0.089 Score=57.93 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=49.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 451 DMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 451 gl~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
+.+.++.+.++++-...++.+.++ ..++.+- ++.-||.. +...-.+++.||.+ |++|+++....|+|+++
T Consensus 181 g~~~~di~~av~e~Va~~i~~~~~------~~~~~~~-i~~~GG~a~n~~~~~~~~~~lg~~-v~~p~~~~~~~AlGAAl 252 (270)
T 1hux_A 181 GTDKIDIIAGIHRSVASRVIGLAN------RVGIVKD-VVMTGGVAQNYGVRGALEEGLGVE-IKTSPLAQYNGALGAAL 252 (270)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHH------TTCCCSS-EEEESGGGGCHHHHHHHHHHHCSC-EECCGGGGGHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHh------cCCCCCe-EEEeCccccCHHHHHHHHHHHCCC-eEeCCCcchHhHHHHHH
Confidence 367889998888777777644433 2343332 34444443 44455788999997 88899998899999876
Q ss_pred cc
Q 001049 529 AD 530 (1173)
Q Consensus 529 ad 530 (1173)
.-
T Consensus 253 ~A 254 (270)
T 1hux_A 253 YA 254 (270)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 8
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=93.76 E-value=0.027 Score=68.32 Aligned_cols=89 Identities=8% Similarity=0.054 Sum_probs=55.1
Q ss_pred CCCCceEEEEeccCccccEEEEecCCceEEEEEeccC--CC------CCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCC
Q 001049 4 VKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DP------TNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDK 75 (1173)
Q Consensus 4 ~~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p------~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~ 75 (1173)
|.+++|.||||+|+|.+-++++|.+|+++...+.+.. .| +| ++.+.+.+..++++++.+ .+++.++
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d~~G~il~~~~~~~~~~~p~~g~~eqd-p~~~~~~~~~~i~~~~~~-----~~~~~~~ 74 (554)
T 3l0q_A 1 MSLASYFIGVDVGTGSARAGVFDLQGRMVGQASREITMFKPKADFVEQS-SENIWQAVCNAVRDAVNQ-----ADINPIQ 74 (554)
T ss_dssp ---CCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCEEEETTEEEEC-HHHHHHHHHHHHHHHHHH-----HTCCGGG
T ss_pred CCCCcEEEEEEECcccEEEEEECCCCCEEEEEEEecccccCCCCccccC-HHHHHHHHHHHHHHHHHH-----cCCCHhH
Confidence 3445699999999999999999988885555555421 01 12 233455555555544321 1345678
Q ss_pred eeEEEEehhHhhhHhhhcCCCcEE
Q 001049 76 IEWIRMGTTVATNALLERKGERIA 99 (1173)
Q Consensus 76 v~~i~hGTT~atNAllerkg~rvg 99 (1173)
|..|-++++ .+=.++.++|..+.
T Consensus 75 I~~Igis~~-~~~v~~D~~G~pl~ 97 (554)
T 3l0q_A 75 VKGLGFDAT-CSLVVLDKEGNPLT 97 (554)
T ss_dssp EEEEEEEEC-SCEEEEETTSCBCC
T ss_pred EEEEEEcCC-CceEEECCCCCEee
Confidence 888888876 45445666776654
No 9
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=93.33 E-value=0.032 Score=66.99 Aligned_cols=87 Identities=16% Similarity=0.066 Sum_probs=51.0
Q ss_pred CCCCCceEEEEeccCccccEEEEecCCceEEEEEeccCC--C------CCCCChHHHHHHHHHHHhhCCCCCCCCCCCCC
Q 001049 3 SVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVD--P------TNYDDAPVEGIRRILEEYTGEKIPRTSKIPTD 74 (1173)
Q Consensus 3 ~~~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~--p------~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~ 74 (1173)
||..++|.||||+|+|.+-++++|.+|+++...+.+... | +| ++.+.+.+..+++++..+ .+++..
T Consensus 2 ~~~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d-p~~~~~~i~~~i~~~~~~-----~~~~~~ 75 (508)
T 3ifr_A 2 SLAQGRQVIGLDIGTTSTIAILVRLPDTVVAVASRPTTLSSPHPGWAEED-PAQWWDNARAVLAELKTT-----AGESDW 75 (508)
T ss_dssp -----CEEEEEEECSSEEEEEEEETTTEEEEEEEEECCCBCSSTTCCEEC-HHHHHHHHHHHHHHHHHH-----HCGGGC
T ss_pred CcccCCEEEEEEecCcceEEEEECCCCCEEEEEEEecceecCCCCceEEC-HHHHHHHHHHHHHHHHHh-----cCCChh
Confidence 344567999999999999999999888865566654311 1 11 233556666666554321 123456
Q ss_pred CeeEEEEehhHhhhHhhhcCC
Q 001049 75 KIEWIRMGTTVATNALLERKG 95 (1173)
Q Consensus 75 ~v~~i~hGTT~atNAllerkg 95 (1173)
+|..|-++++-.+=.++.++|
T Consensus 76 ~I~~Igis~~~~~~v~~D~~G 96 (508)
T 3ifr_A 76 RPGGICVTGMLPAVVLLDDRG 96 (508)
T ss_dssp CEEEEEEEECSSCBEEECTTS
T ss_pred heEEEEEECCCCcEEEECCCC
Confidence 787777777544444444444
No 10
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=93.13 E-value=0.068 Score=64.21 Aligned_cols=84 Identities=11% Similarity=-0.021 Sum_probs=54.7
Q ss_pred CCceEEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeE
Q 001049 6 EEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEW 78 (1173)
Q Consensus 6 ~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~ 78 (1173)
+|+|.||||+|+|.+-++++|.+|+++...+.+.. .|.+ -++.+.+.+..+++++. + .+++.++|..
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~-----~~~~~~~I~~ 76 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADRDGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-Q-----SGVDARRVSA 76 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-T-----TTCCGGGEEE
T ss_pred cccEEEEEEeCCCceEEEEECCCCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-h-----cCCChhHeEE
Confidence 36699999999999999999878885555555431 1111 12345677777777764 2 2345567888
Q ss_pred EEEehhHhhhHhhhcCC
Q 001049 79 IRMGTTVATNALLERKG 95 (1173)
Q Consensus 79 i~hGTT~atNAllerkg 95 (1173)
|-++++..+=.++.++|
T Consensus 77 Igis~q~~~~v~~D~~G 93 (511)
T 3hz6_A 77 IVLSGQMQNFLPLDQDH 93 (511)
T ss_dssp EEEEECCSCBEEECTTS
T ss_pred EEEecccccEEEECCCc
Confidence 88877654444444444
No 11
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=92.79 E-value=0.036 Score=61.46 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=23.3
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEeccCCC
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDP 42 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p 42 (1173)
|.||||+|||+|.++++| +|+++...+.+++.|
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~g~il~~~~~~~~~~ 33 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-NGAVIKRLGTKGINP 33 (291)
T ss_dssp ---CEECCTTCEEEEEEC-SSSEEEEEEECCCCT
T ss_pred CEEEEEeccccEEEEEEc-CCeEEEEEECCCCCc
Confidence 358999999999999998 888555556654333
No 12
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=92.78 E-value=0.098 Score=59.22 Aligned_cols=47 Identities=15% Similarity=0.196 Sum_probs=35.6
Q ss_pred CCCCCC-ceEEEEcCchhhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 481 GHETRN-HALACFGGAGPQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 481 G~dprd-f~LvafGGaGplha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
+.+|.. -.++..||++-+..-.+.++++++ +.+++.|-.++|.|+..
T Consensus 273 ~~~~~~~~~IvltGGGA~l~~~~l~~~~~~~-v~v~~~P~~a~a~G~~~ 320 (329)
T 4apw_A 273 GFKLDQLDSLIFIGGTTQKLKEQISKTYPNN-SIITNNSQWTTCEGLYK 320 (329)
T ss_dssp TCCTTSCSEEEEESTTHHHHHHHHHHHSTTC-EECCSSGGGHHHHHHHH
T ss_pred CCCHHHccEEEEECChHHHHHHHHHHHcCCC-CEecCCChhhHHHHHHH
Confidence 456652 356667887777777788888875 78899999999999764
No 13
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=92.63 E-value=0.13 Score=61.86 Aligned_cols=79 Identities=18% Similarity=0.054 Sum_probs=49.9
Q ss_pred CCCCCCCceEEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCC
Q 001049 1 MGSVKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPT 73 (1173)
Q Consensus 1 ~~~~~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~ 73 (1173)
|.|| +.++.||||+|+|.+-++++|.+|+++...+.+.. .|++ -++.+++.+.+++++++.+ .++++
T Consensus 20 ~~~M-M~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~-----~~~~~ 93 (520)
T 4e1j_A 20 FQSM-MGGYILAIDQGTTSTRAIVFDGNQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEK-----SGITA 93 (520)
T ss_dssp CCCC-CSCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT-----TTCCG
T ss_pred HHHH-hhCeEEEEEeCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHh-----cCCCc
Confidence 3455 23589999999999999999888885556555431 1111 1234566666666665432 23455
Q ss_pred CCeeEEEEehhH
Q 001049 74 DKIEWIRMGTTV 85 (1173)
Q Consensus 74 ~~v~~i~hGTT~ 85 (1173)
++|..|-++++-
T Consensus 94 ~~I~~Igis~~g 105 (520)
T 4e1j_A 94 NDIAAIGITNQR 105 (520)
T ss_dssp GGEEEEEEEECS
T ss_pred ccEEEEEEeCCc
Confidence 678888777653
No 14
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=92.59 E-value=1.1 Score=50.22 Aligned_cols=66 Identities=14% Similarity=0.068 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchhhhHHHHHHHcCCC--EEEECCCCCccchhcccc
Q 001049 460 GFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMR--EVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 460 gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGplha~~lA~~lGi~--~VivP~~~~v~sA~G~~~ 528 (1173)
.+++-..+.+.+.|.....+. -|+ + .++..||+..+..-.+.+.++.. ++.+|.+|..++|+|++.
T Consensus 250 ~~i~~~~~~~~~~i~~~i~~~-~~~-~-~vvl~GGga~ll~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~ 317 (320)
T 2zgy_A 250 EAMNEALRKLEQRVLNTLNEF-SGY-T-HVMVIGGGAELICDAVKKHTQIRDERFFKTNNSQYDLVNGMYL 317 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC-CCC-C-EEEEESTTHHHHHHHHHHTSCCCGGGEECCSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh-cCC-C-eEEEECChHHHHHHHHHHHhCCCCCceeeCCCcHHHHHHHHHH
Confidence 345555555665555544332 133 2 45666777677666777788875 588999999999999874
No 15
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=92.47 E-value=0.055 Score=64.89 Aligned_cols=74 Identities=19% Similarity=0.072 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...++.+....|..++. |.+-||+. ++..-.+|+.+|++ |.+|... -.+|+|+++.
T Consensus 372 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~--i~~~GGga~s~~~~Qi~ADv~g~p-V~~~~~~-e~~alGaA~l 447 (506)
T 3h3n_X 372 TTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPL--LKVDGGAAKNDLLMQFQADILDID-VQRAANL-ETTALGAAYL 447 (506)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCE--EEEESGGGGCHHHHHHHHHHHTSE-EEECSSS-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCE--EEEecccccCHHHHHHHHHHhCCe-EEecCCC-cchhHHHHHH
Confidence 35666666666666666666666665556877663 55556643 33445689999987 7777744 4789998764
No 16
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=92.12 E-value=0.058 Score=64.25 Aligned_cols=81 Identities=10% Similarity=0.010 Sum_probs=55.4
Q ss_pred EEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEEEEe
Q 001049 10 RFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMG 82 (1173)
Q Consensus 10 rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i~hG 82 (1173)
.||||+|+|.+.++++|.+|+++...+.++. .|++ -++.+.+.+..+++++... ...++|..|-++
T Consensus 2 ~lgiDiGtt~~k~~l~d~~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~-------~~~~~i~~Igis 74 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQ-------HSLQDVKALGIA 74 (484)
T ss_dssp EEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH-------SCCTTCCEEEEE
T ss_pred EEEEEecCcccEEEEECCCCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHh-------CCccceEEEEEc
Confidence 5999999999999999877885566665431 1111 1234566676666665321 124578899999
Q ss_pred hhHhhhHhhhcCCCc
Q 001049 83 TTVATNALLERKGER 97 (1173)
Q Consensus 83 TT~atNAllerkg~r 97 (1173)
++..+..++.++|..
T Consensus 75 ~~~~~~v~~D~~G~~ 89 (484)
T 2itm_A 75 GQMHGATLLDAQQRV 89 (484)
T ss_dssp ECSSCBEEECTTCCB
T ss_pred CCcCcEEEECCCcCC
Confidence 988888888877654
No 17
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=92.09 E-value=0.24 Score=55.20 Aligned_cols=53 Identities=17% Similarity=0.056 Sum_probs=37.2
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
+++.||||+|||+|-++++|.+|+++...+.++. +....+.+++-|.++++++
T Consensus 5 ~~~~lgiDiggt~~~~~l~d~~g~il~~~~~~~~-~~~~~~~~~~~l~~~i~~~ 57 (326)
T 2qm1_A 5 DKKIIGIDLGGTTIKFAILTTDGVVQQKWSIETN-ILEDGKHIVPSIIESIRHR 57 (326)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-CTTTTTTHHHHHHHHHHHH
T ss_pred ccEEEEEEECCCEEEEEEECCCCCEEEEEEEcCC-CCCCHHHHHHHHHHHHHHH
Confidence 3588999999999999999877885555555542 2223455677776666654
No 18
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=91.06 E-value=0.16 Score=61.85 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch---hhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG---PQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG---plha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
.+..+.+.++++=..-++...++.+. +.|..++ .|.+.||+. ++..-.+|+.+|++ |.+|.. .-.+|+|+++
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~~~l~-~~g~~~~--~i~~~GGga~ks~~~~Qi~ADv~g~p-V~~~~~-~e~~alGaA~ 483 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIVDAFH-GRGVEVH--ELYACGGLPQKNHLLMQIFADVTNRE-IKVAAS-KQTPALGAAM 483 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH-TTTCCEE--EEEEESSHHHHCHHHHHHHHHHHTSC-EEEBCC-SSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCcC--EEEEEcCchhhCHHHHHHHHHHHCCe-eEecCC-CccHHHHHHH
Confidence 35666666666655555555555543 3677665 466667764 55566789999998 777774 4578899875
Q ss_pred c
Q 001049 529 A 529 (1173)
Q Consensus 529 a 529 (1173)
.
T Consensus 484 l 484 (572)
T 3jvp_A 484 F 484 (572)
T ss_dssp H
T ss_pred H
Confidence 4
No 19
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=91.02 E-value=0.22 Score=54.92 Aligned_cols=65 Identities=20% Similarity=0.171 Sum_probs=44.8
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEEEEehhH
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTV 85 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i~hGTT~ 85 (1173)
|.++||+|+|++-+-++| +++++...+.+| +....+.+..-+...++. .++++++|+.+++++.+
T Consensus 3 MlL~IDIGNT~iK~gl~d-~~~l~~~~r~~T--~~~t~de~~~~l~~ll~~---------~~~~~~~I~~iiISSVv 67 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFD-GDEIKLRFRHTS--KVSTSDELGIFLKSVLRE---------NNCSPETIRKIAICSVV 67 (266)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEEC--SCCCHHHHHHHHHHHHHT---------TTCCGGGCCEEEEEESC
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecC--CCCCHHHHHHHHHHHHHH---------cCCChhhceEEEEecch
Confidence 689999999999999996 456455666643 233344455556665554 24556789999999875
No 20
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=90.57 E-value=0.24 Score=59.55 Aligned_cols=80 Identities=11% Similarity=0.035 Sum_probs=56.2
Q ss_pred CCCCceEEEEeccCccccEEEEe-cCCceEEEEEeccCCC----CCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeE
Q 001049 4 VKEEKLRFCIDRGGTFTDVYAEI-PGQLEGQVLKLLSVDP----TNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEW 78 (1173)
Q Consensus 4 ~~~~~~rigIDvGGTfTD~v~~~-~~g~~~~~~K~~st~p----~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~ 78 (1173)
|++++|.||||+|+|.+-++++| ++|+++...+.+. | +| ++.+.+.+.++++++ +. .++|..
T Consensus 1 m~~~~~~lgIDiGtts~ka~l~d~~~G~i~~~~~~~~--~g~~e~d-~~~~~~~i~~~l~~~---------~~-~~~I~~ 67 (515)
T 3i8b_A 1 MSLRTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKH--PNGTSVD-PSYWWSAFQEAAEQA---------GG-LDDVSA 67 (515)
T ss_dssp -CCSCEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--CSSSEEC-THHHHHHHHHHHHHT---------TC-STTEEE
T ss_pred CCCCcEEEEEEeccccEEEEEEECCCCeEEEEEEEeC--CCCceEC-HHHHHHHHHHHHHhc---------CC-ccCceE
Confidence 55667999999999999999999 7888555555542 3 23 345788888888763 22 367888
Q ss_pred EEEehhHhhhHhhhcCCC
Q 001049 79 IRMGTTVATNALLERKGE 96 (1173)
Q Consensus 79 i~hGTT~atNAllerkg~ 96 (1173)
|-.+++..+=.++.++|.
T Consensus 68 Igis~q~~~~v~~D~~G~ 85 (515)
T 3i8b_A 68 LAVGGQQHGMVILDNQGN 85 (515)
T ss_dssp EEEEECSSCBEEECTTSC
T ss_pred EEEeCCcceEEEECCCCC
Confidence 888886655555555554
No 21
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=90.32 E-value=0.12 Score=62.13 Aligned_cols=74 Identities=16% Similarity=0.093 Sum_probs=48.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...++.+...-|..++. |.+-||+. ++..-.+|+.+|++ |.+|.... .+|+|+++.
T Consensus 370 ~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~--i~~~GGga~s~~~~Qi~ADv~g~p-V~~~~~~e-~~alGaA~l 445 (510)
T 2p3r_A 370 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHA--LRVDGGAVANNFLMQFQSDILGTR-VERPEVRE-VTALGAAYL 445 (510)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSE--EEEESGGGGCHHHHHHHHHHHTSE-EEEESCCC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccE--EEEeCchhcCHHHHHHHHHHhCCc-eEecCCCC-cHHHHHHHH
Confidence 45666676666666666666666665555877764 55556542 33444689999987 77777544 778887653
No 22
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=89.42 E-value=0.23 Score=59.45 Aligned_cols=74 Identities=14% Similarity=0.034 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...++.+....|..++. |.+-||+. ++..-.+|+.+|++ |.+|... -.+|+|+++.
T Consensus 373 ~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~--i~~~GG~aks~~~~Qi~Adv~g~p-V~~~~~~-e~~alGaA~l 448 (501)
T 3g25_A 373 TEKEHFIRATLESLCYQTRDVMEAMSKDSGIDVQS--LRVDGGAVKNNFIMQFQADIVNTS-VERPEIQ-ETTALGAAFL 448 (501)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSE--EEEESGGGGCHHHHHHHHHHHTSE-EEEESCC-CHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcE--EEEecchhcCHHHHHHHHHHhCCc-eEecCCC-cchHHHHHHH
Confidence 45667777777666666666666665556877763 55556642 23334689999988 7777744 4788998764
No 23
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=89.32 E-value=0.15 Score=61.37 Aligned_cols=73 Identities=16% Similarity=0.117 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCc--hhhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGA--GPQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGa--Gplha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
.+..+.+.++++=..-++...++.+....|..++. |.+-||+ -++..-.+|+.||++ |.+|.... .+|+|+++
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~--i~v~GGgaks~~~~Qi~ADvlg~p-V~~~~~~E-~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIRLHA--LRVDGGAVANNFLMQFQSDILGTR-VERPEVRE-VTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSE--EEEESGGGGCHHHHHHHHHHHTSE-EEEESCCC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCE--EEEECchhhCHHHHHHHHHHHCCE-EEeCCCCc-hHHHHHHH
Confidence 45666666666655566666666666677888774 5555665 345556789999987 77877654 57888764
No 24
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=89.24 E-value=0.27 Score=55.34 Aligned_cols=53 Identities=19% Similarity=0.052 Sum_probs=33.7
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccCCCC-CCCChHHHHHHHHHHHh
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPT-NYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~-~~~~~~~~gi~~~l~~~ 60 (1173)
+|.||||+|||+|-++++|.+|+++...+.+++.+. ...+.+++-|..+++++
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~ 59 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSEDGKILAEADGLSTNHWLIGTDKCVERINEMVNRA 59 (347)
T ss_dssp CEEEEEEECTTCEEEEEEETTSCEEEEEEECCCCHHHHCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEcCccceEEEEEeCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 489999999999999999877874455555332110 11234455555555543
No 25
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=88.78 E-value=0.8 Score=52.65 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc-eEEEEcCch--hhhHHHHHHHc-CCCEEEECCCCCccchhcccc
Q 001049 453 TVEDIALGFVNVANETMCRPIRQLTEMKGHETRNH-ALACFGGAG--PQHACAIARSL-GMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 453 ~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf-~LvafGGaG--plha~~lA~~l-Gi~~VivP~~~~v~sA~G~~~ 528 (1173)
+.++.. .+++-..+.+.+.|+....+.++++.+. .++..||++ |...-.+.+.+ |. +|..+.+|....|.|+++
T Consensus 319 ~r~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-~v~~~~~p~~ava~Gaa~ 396 (404)
T 3i33_A 319 TRARFE-ELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGK-ELNKSINPDEAVAYGAAV 396 (404)
T ss_dssp EHHHHH-HHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTC-CCBCSSCTTTHHHHHHHH
T ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCC-CCCCCcCHHHHHHHHHHH
Confidence 444443 3444445566677777777777766543 356667777 55666788888 55 488889999999999875
No 26
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=87.99 E-value=0.28 Score=58.54 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...++.+....|..++. |++-||+. ++..-.+|+.+|++ |.+|.... .+|+|+++.
T Consensus 367 ~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~--i~~~GG~a~n~~~~q~~Adv~g~p-V~~~~~~e-~~alGaA~l 442 (495)
T 2dpn_A 367 TSRAHLARAALEGVAFQVRDVVLAMEEEAGVRLKV--LKADGGMAQNRLFLKIQADLLGVP-VAVPEVTE-TTALGAALM 442 (495)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCC--EEEESGGGGCHHHHHHHHHHHTSC-EEEESCSC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcE--EEEecccccCHHHHHHHHHHhCCe-eEecCCcc-cHHHHHHHH
Confidence 45677777777666666666666665445776654 44455542 44455789999988 77777554 789998764
No 27
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=87.82 E-value=0.27 Score=58.64 Aligned_cols=68 Identities=15% Similarity=-0.022 Sum_probs=44.9
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCC-C------CCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEE
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVD-P------TNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWI 79 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~-p------~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i 79 (1173)
|+|.||||+|+|.+-++++|++|+++...+.+... | +| ++.+.+.+..+++++. ..+|..|
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~G~i~~~~~~~~~~~~~~g~~eqd-p~~~~~~~~~~i~~~~-----------~~~I~aI 72 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLDGRMLDRQVRPSIPLEIDGIRRLD-APDTGRWLLDVLSRYA-----------DHPVTTI 72 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTTSCEEEEEEEECCCEESSSCEECC-HHHHHHHHHHHHHHTT-----------TSCCCEE
T ss_pred hceEEEEEcCCCCeEEEEEECCCcEEEEEEecCCcccCCCceeEC-HHHHHHHHHHHHHHHH-----------hcCCCEE
Confidence 56889999999999999998888866666665321 1 12 2456777777777642 1457777
Q ss_pred EEehhHh
Q 001049 80 RMGTTVA 86 (1173)
Q Consensus 80 ~hGTT~a 86 (1173)
-++++..
T Consensus 73 gis~~~~ 79 (482)
T 3h6e_A 73 VPVGHGA 79 (482)
T ss_dssp EEEECSS
T ss_pred EEecCcC
Confidence 7776533
No 28
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=87.80 E-value=0.34 Score=58.06 Aligned_cols=81 Identities=15% Similarity=-0.002 Sum_probs=51.0
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEE
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWI 79 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i 79 (1173)
++|.||||+|+|.+-++++|.+|+++...+.++. .|.+ -++.+.+.+..+++++... .. .+|..|
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~-------~~-~~I~~I 74 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDINGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK-------ID-GKIAAI 74 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT-------CS-SEEEEE
T ss_pred CCEEEEEEecCCceEEEEEcCCCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHh-------CC-CCeEEE
Confidence 3589999999999999999988885666665431 1111 1234566677777665321 11 567777
Q ss_pred EEehhHhhhHhhhcCC
Q 001049 80 RMGTTVATNALLERKG 95 (1173)
Q Consensus 80 ~hGTT~atNAllerkg 95 (1173)
-++++..+=.++.++|
T Consensus 75 gis~q~~~~v~~D~~G 90 (504)
T 3ll3_A 75 SWSSQMHSLIGLGSDD 90 (504)
T ss_dssp EEEECSSCBEEECTTS
T ss_pred EEECCCCcEEEECCCC
Confidence 7777554444444444
No 29
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=87.59 E-value=0.28 Score=58.67 Aligned_cols=74 Identities=14% Similarity=0.193 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHET-RNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dp-rdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
.+..+.+.++++=..-++...++.+....|..+ +. |++-||+. ++..-.+|+.+|++ |.+|.... .+|+|+++
T Consensus 375 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~--i~~~GG~a~s~~~~Q~~Adv~g~p-V~~~~~~e-~~alGaA~ 450 (503)
T 2w40_A 375 TERSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHV--LRCDGGMTKNKPFMQFNSDIINTK-IEVSKYKE-VTSLGAAV 450 (503)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSC--EEEESGGGGCHHHHHHHHHHHTSC-EEEESCSC-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccce--EEEeCccccCHHHHHHHHHHHCCe-EEecCCCc-chHHHHHH
Confidence 456677777776666666666666655557765 43 44455543 44445789999988 77777554 78999876
Q ss_pred c
Q 001049 529 A 529 (1173)
Q Consensus 529 a 529 (1173)
.
T Consensus 451 l 451 (503)
T 2w40_A 451 L 451 (503)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=87.35 E-value=1.2 Score=50.92 Aligned_cols=75 Identities=15% Similarity=0.219 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC-ceEEEEcCch--hhhHHHHHHHc-CCCEEEECCCCCccchhccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRN-HALACFGGAG--PQHACAIARSL-GMREVLIHRFCGILSAYGMG 527 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprd-f~LvafGGaG--plha~~lA~~l-Gi~~VivP~~~~v~sA~G~~ 527 (1173)
++.++.. .+++-..+.+.+.|+....+.++++.+ -.++..||+. |...-.+.+.+ +.+ |..+.+|....|.|++
T Consensus 310 i~r~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~-v~~~~~p~~ava~Gaa 387 (394)
T 3qfu_A 310 LTRAKFE-ELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKK-ASKGINPDEAVAYGAA 387 (394)
T ss_dssp EEHHHHH-HHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCC-CBCCSCTTTHHHHHHH
T ss_pred EEHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCC-CCCCcCHHHHHHHHHH
Confidence 3444443 344444556667777777777776543 2455567776 45556788888 554 7888899999999987
Q ss_pred c
Q 001049 528 L 528 (1173)
Q Consensus 528 ~ 528 (1173)
+
T Consensus 388 ~ 388 (394)
T 3qfu_A 388 V 388 (394)
T ss_dssp H
T ss_pred H
Confidence 5
No 31
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=86.55 E-value=1.4 Score=49.05 Aligned_cols=74 Identities=11% Similarity=-0.005 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCc-hhhh---HHHHHHHc--CCCEEEECCCCCccchh
Q 001049 451 DMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGA-GPQH---ACAIARSL--GMREVLIHRFCGILSAY 524 (1173)
Q Consensus 451 gl~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGa-Gplh---a~~lA~~l--Gi~~VivP~~~~v~sA~ 524 (1173)
|.+.|+.|.++++.+..++....+..+..++.+ + +.|.|+ =..+ .-.+.+.+ +=.++++|++++.+.|+
T Consensus 206 g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i~-~----Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAl 280 (287)
T 2ews_A 206 DFTPSNKLAAVIGVVGEVVTTMAITVAREFKTE-N----IVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAI 280 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC-E----EEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-e----EEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHH
Confidence 589999999999999999888888877777765 2 566665 3333 23455542 33469999999999999
Q ss_pred ccccc
Q 001049 525 GMGLA 529 (1173)
Q Consensus 525 G~~~a 529 (1173)
|+++.
T Consensus 281 GAaL~ 285 (287)
T 2ews_A 281 GALYL 285 (287)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99874
No 32
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=86.50 E-value=0.44 Score=52.61 Aligned_cols=52 Identities=15% Similarity=-0.102 Sum_probs=33.2
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEeccCCC-CCCCChHHHHHHHHHHHh
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDP-TNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p-~~~~~~~~~gi~~~l~~~ 60 (1173)
+.||||+|||+|.++++|.+|+++...+.++..+ ....+.+++-|.++++++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~g~i~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~ 55 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCEGNFIGEGSSGPGNYHNVGLTRAIENIKEAVKIA 55 (299)
T ss_dssp CEEEEEECSSCEEEEEECTTSCEEEEEEESCCCHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCcEEEEEEcCCCCEEEEEeCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 7899999999999999987788444555543100 011234555555555543
No 33
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=86.04 E-value=1.1 Score=51.71 Aligned_cols=52 Identities=4% Similarity=-0.205 Sum_probs=37.0
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
..+.||||+|||++.++++|.+|+++...+.++ |....+.+++.+.++++++
T Consensus 84 ~~~~lgiDiG~t~i~~~l~d~~G~il~~~~~~~--~~~~~~~~~~~l~~~i~~~ 135 (406)
T 1z6r_A 84 AWHYLSLRISRGEIFLALRDLSSKLVVEESQEL--ALKDDLPLLDRIISHIDQF 135 (406)
T ss_dssp TCEEEEEEEETTEEEEEEEETTCCEEEEEEEEC--CSSCSSCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCEEEEEEEcCCCCEEEEEEecC--CCCCHHHHHHHHHHHHHHH
Confidence 458899999999999999987788455555543 3333455677777666654
No 34
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=86.01 E-value=0.5 Score=51.96 Aligned_cols=33 Identities=18% Similarity=0.018 Sum_probs=24.9
Q ss_pred CCceEEEEeccCccccEEEEecCCceEEEEEec
Q 001049 6 EEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLL 38 (1173)
Q Consensus 6 ~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~ 38 (1173)
|.|+.||||+|||+|.++++|.+|+++...+.+
T Consensus 2 ~~m~~lgidiggt~i~~~l~d~~g~il~~~~~~ 34 (292)
T 2gup_A 2 NAMTIATIDIGGTGIKFASLTPDGKILDKTSIS 34 (292)
T ss_dssp --CCEEEEEEETTEEEEEEECTTCCEEEEEEEC
T ss_pred CCcEEEEEEECCCEEEEEEECCCCCEEEEEEEe
Confidence 345689999999999999998778845555554
No 35
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=85.45 E-value=1 Score=51.72 Aligned_cols=74 Identities=18% Similarity=0.160 Sum_probs=57.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCc-h---hhhHHHHHHHcCC-----CEEEECCCCCcc
Q 001049 451 DMTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGA-G---PQHACAIARSLGM-----REVLIHRFCGIL 521 (1173)
Q Consensus 451 gl~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGa-G---plha~~lA~~lGi-----~~VivP~~~~v~ 521 (1173)
+.+.|+.|.+++..+..+++......+...+.+ + +.|.|+ - |...-.|.+.|+. .++++|++++.+
T Consensus 275 ~~~~eDIa~gll~sVa~~I~~lA~l~A~~~~i~-~----IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~ 349 (360)
T 2i7n_A 275 SISKEDLARATLVTITNNIGSIARMCALNENID-R----VVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF 349 (360)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC-C----EEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-e----EEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHH
Confidence 478999999999999999888877777777776 2 555555 2 3344467788753 469999999999
Q ss_pred chhccccc
Q 001049 522 SAYGMGLA 529 (1173)
Q Consensus 522 sA~G~~~a 529 (1173)
.|+|+++.
T Consensus 350 GAlGAaL~ 357 (360)
T 2i7n_A 350 GAVGALLE 357 (360)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
No 36
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=85.04 E-value=1.1 Score=49.72 Aligned_cols=33 Identities=15% Similarity=-0.045 Sum_probs=25.6
Q ss_pred CCceEEEEeccCccccEEEEecCCceEEEEEec
Q 001049 6 EEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLL 38 (1173)
Q Consensus 6 ~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~ 38 (1173)
+.|+.||||+|||++-++++|.+|+++...+.+
T Consensus 2 ~~m~~lgiDiGgt~i~~~l~d~~G~il~~~~~~ 34 (297)
T 4htl_A 2 NAMKIAAFDIGGTALKMGVVLPHGEIILTKSAE 34 (297)
T ss_dssp --CCEEEEEECSSEEEEEEECTTSCEEEEEEEE
T ss_pred CccEEEEEEeCCCeEEEEEECCCCCEEEEEEec
Confidence 345889999999999999998778855555554
No 37
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=84.78 E-value=1 Score=50.63 Aligned_cols=50 Identities=18% Similarity=0.139 Sum_probs=34.3
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHH
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEE 59 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~ 59 (1173)
+|.||||+|||++-++++|.+|+++...+.++ |....+.+++.|.+.+++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~--~~~~~~~~~~~i~~~i~~ 73 (327)
T 4db3_A 24 AMYYGFDVGGTKIEFGAFNEKLERVATERVPT--PTDDYPLLLETIAGLVAK 73 (327)
T ss_dssp CCEEEEEECSSEEEEEEECTTCCEEEEEEEEC--CTTCHHHHHHHHHHHHHH
T ss_pred cEEEEEEECCCEEEEEEEeCCCcEEEEEEecC--CCCCHHHHHHHHHHHHHH
Confidence 47899999999999999987788555556543 332234455555555544
No 38
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=84.20 E-value=0.86 Score=51.00 Aligned_cols=50 Identities=18% Similarity=0.131 Sum_probs=36.0
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
+|.||||+|||++-++++|.+|+++...+.++ |.+ .+.+++.|.+.++++
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~G~i~~~~~~~~--~~~-~~~~~~~i~~~i~~~ 51 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEEGRILSTFKVAT--PPT-AEGIVDAICAAVAGA 51 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTTCCBCCCEEEEC--CSS-HHHHHHHHHHHHHHH
T ss_pred cEEEEEEECCCEEEEEEECCCCCEEEEEEeeC--CCC-HHHHHHHHHHHHHHH
Confidence 48899999999999999987787555555543 333 345666676666654
No 39
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=84.16 E-value=0.69 Score=55.33 Aligned_cols=74 Identities=18% Similarity=0.157 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...++.+....|..++. |.+-||+. ++..-.+|+.+|++ |.+|.... .+|+|+++.
T Consensus 372 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~--i~~~GG~a~s~~~~Qi~Adv~g~p-V~~~~~~e-~~alGaA~l 447 (504)
T 2d4w_A 372 VNRNHIARAALEATAFQSREVVDAMNADSGVDLTE--LRVDGGMVANELLMQFQADQLGVD-VVRPKVAE-TTALGAAYA 447 (504)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCE--EEEESGGGGCHHHHHHHHHHHTSC-EEEESCSC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcce--EEEeCCcccCHHHHHHHHHHhCCe-EEeCCCCc-chHHHHHHH
Confidence 45666777777666666666666665556776653 55555542 33445689999998 77776544 688998764
No 40
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=83.94 E-value=0.77 Score=50.27 Aligned_cols=31 Identities=19% Similarity=0.033 Sum_probs=24.7
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEecc
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLS 39 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~s 39 (1173)
+.||||+|||+|.++++|.+|+++...+.++
T Consensus 2 ~~lgidiggt~~~~~l~d~~g~il~~~~~~~ 32 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGADGQIRDRRELPT 32 (289)
T ss_dssp CEEEEEECSSEEEEEEECTTCCEEEEEEEEC
T ss_pred eEEEEEeCCCEEEEEEECCCCCEEEEEEecC
Confidence 5799999999999999987788455555544
No 41
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=83.53 E-value=1.2 Score=49.76 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=33.6
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHH
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEE 59 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~ 59 (1173)
..+.||||+|||+|-++++|.+|+++...+.++. .. ..+.+++-|.+++++
T Consensus 23 ~~~~lgiDiGgt~i~~~l~d~~g~il~~~~~~~~-~~-~~~~~~~~i~~~i~~ 73 (327)
T 2ap1_A 23 NAMYYGFDIGGTKIALGVFDSTRRLQWEKRVPTP-HT-SYSAFLDAVCELVEE 73 (327)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-CS-CHHHHHHHHHHHHHH
T ss_pred CceEEEEEECCCEEEEEEEeCCCCEEEEEEecCC-CC-CHHHHHHHHHHHHHH
Confidence 3578999999999999999877885555566542 22 223445555554443
No 42
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=82.74 E-value=0.59 Score=50.20 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=23.5
Q ss_pred CCCCceEEEEeccCccccEEEEecCCceEEEEEecc
Q 001049 4 VKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLS 39 (1173)
Q Consensus 4 ~~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~s 39 (1173)
|.++++.+|||+|||++-+ .|.+|+ + ..|.+|
T Consensus 2 m~~~~~~lgiDIGGT~i~~--~d~~g~-~-~~~~~t 33 (226)
T 3lm2_A 2 MAEDQTVLAIDIGGSHVKI--GLSTDG-E-ERKVES 33 (226)
T ss_dssp CGGGCCEEEEEECSSEEEE--EETTTC-C-EEEEEC
T ss_pred CCcCCEEEEEEECCCEEEE--EECCCC-E-EEEEEC
Confidence 6667789999999999993 455676 4 445543
No 43
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=82.59 E-value=0.77 Score=51.31 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=35.8
Q ss_pred CCceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHH
Q 001049 6 EEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEE 59 (1173)
Q Consensus 6 ~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~ 59 (1173)
+..+.||||+|||++.++++|.+|+++...|.++ |....+.+++.|.+.+++
T Consensus 5 ~~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~--~~~~~~~~~~~i~~~i~~ 56 (310)
T 3htv_A 5 QHNVVAGVDMGATHIRFCLRTAEGETLHCEKKRT--AEVIAPGLVSGIGEMIDE 56 (310)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTSCEEEEEEEEH--HHHHTTCHHHHHHHHHHH
T ss_pred CCCEEEEEEeCCCEEEEEEECCCCCEEEEEEecC--ccccHHHHHHHHHHHHHH
Confidence 3468999999999999999987888544455543 221234566666666654
No 44
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=81.00 E-value=1.7 Score=50.60 Aligned_cols=52 Identities=12% Similarity=0.019 Sum_probs=34.9
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
..+.||||+|||++.++++|.+|+++...+.++ +..+ .+.+++.|.++++++
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~il~~~~~~~-~~~~-~~~~~~~l~~~i~~~ 158 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGEVLIDTKIDI-HEID-QDDVLARLLFEIEEF 158 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSCEEEEEEEEC-CCCB-HHHHHHHHHHHHHHH
T ss_pred CCEEEEEEECCCEEEEEEECCCCCEEEEEEEcC-CCCC-HHHHHHHHHHHHHHH
Confidence 457899999999999999987788455555543 2222 344556666655554
No 45
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=80.86 E-value=0.92 Score=50.41 Aligned_cols=50 Identities=14% Similarity=-0.012 Sum_probs=33.1
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
||.||||+|||++.++++|.++. +...+.++ +..+. +.+++.|.++++++
T Consensus 1 M~~lgiDiGgt~i~~~l~d~~~~-l~~~~~~~-~~~~~-~~~~~~i~~~i~~~ 50 (302)
T 3vov_A 1 MKVVGLDLGGTKIAAGVFDGKRL-LSKVVVPT-PKEGG-ERVAEALAEAAERA 50 (302)
T ss_dssp CCEEEEEECSSEEEEEEECSSSB-SCCEEEEC-CSSCH-HHHHHHHHHHHHHH
T ss_pred CEEEEEEEcCCEEEEEEEeCCCc-EEEEEEcC-CCCCh-HHHHHHHHHHHHHH
Confidence 37899999999999999986654 54455543 22222 55666666665543
No 46
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=80.69 E-value=0.53 Score=55.92 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...+..+....|..++. |.+-||+. ++..-.+|+.+|++ |.+|+ .-.+|+|+++.
T Consensus 362 ~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~--i~~~GGgaks~~~~Qi~ADvlg~p-V~~~~--~e~~alGaa~~ 436 (489)
T 2uyt_A 362 ESDAELARCIFDSLALLYADVLHELAQLRGEDFSQ--LHIVGGGCQNTLLNQLCADACGIR-VIAGP--VEASTLGNIGI 436 (489)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSE--EEEESGGGGCHHHHHHHHHHHTSE-EEECC--TTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCE--EEEeCChhhhHHHHHHHHHHHCCe-eecCC--ccHhHHHHHHH
Confidence 57888888888877777777777776556877653 55555543 34445689999987 66766 35688998443
No 47
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=80.26 E-value=1.1 Score=50.26 Aligned_cols=55 Identities=15% Similarity=0.101 Sum_probs=36.1
Q ss_pred CCCceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 5 KEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 5 ~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
+...+.||||+|||++.++++|.+|+++...+.++. .....+.+++.|.+.++++
T Consensus 16 ~~~~~~lgidiggt~i~~~l~d~~g~il~~~~~~~~-~~~~~~~~~~~i~~~i~~~ 70 (321)
T 3r8e_A 16 YFQGMILGIDVGGTSVKFGLVTPEGEIQNATRFMTA-DWVNGIGFVESMKLEIGNF 70 (321)
T ss_dssp ---CCEEEEECCSSEEEEEEECTTCCEEEEEEEEHH-HHHTTTCHHHHHHHHHHHH
T ss_pred ccCcEEEEEEECCCEEEEEEEcCCCcEEEEEEEeCC-CCCCHHHHHHHHHHHHHHH
Confidence 345689999999999999999877885555555431 1122345667676666554
No 48
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=79.86 E-value=1.4 Score=50.57 Aligned_cols=53 Identities=6% Similarity=-0.161 Sum_probs=34.3
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHh
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~ 60 (1173)
..+.||||+|||++.++++|.+|+++...+.++. +....+.+++-+.++++++
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~G~vl~~~~~~~~-~~~~~~~~~~~l~~~i~~~ 138 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDASMNILAHEAHPLP-SQSDREETLNVMYRIIDRA 138 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETTCCEEEEEEEECC-SSCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEECCCEEEEEEECCCCCEEEEEEEccC-CCCCHHHHHHHHHHHHHHH
Confidence 3578999999999999999877884455555432 2212334555555555443
No 49
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=79.30 E-value=0.92 Score=51.13 Aligned_cols=50 Identities=16% Similarity=0.080 Sum_probs=33.0
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHH
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEE 59 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~ 59 (1173)
.++.||||+|||++.++++|.+|+++...+.++ |.+ .+.+++.|.+++++
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~~--~~~-~~~~~~~i~~~i~~ 78 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMKGEIVKKYTQFN--PKT-YEERINLILQMCVE 78 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETTSCEEEEEEEEC--CSS-HHHHHHHHHHHHHH
T ss_pred CcEEEEEEECCCEEEEEEECCCCcEEEEEEEcC--CCC-HHHHHHHHHHHHHH
Confidence 458899999999999999987788555555543 332 23344555554443
No 50
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=78.48 E-value=2.5 Score=46.48 Aligned_cols=66 Identities=17% Similarity=0.160 Sum_probs=43.9
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEEEEehhH
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTV 85 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i~hGTT~ 85 (1173)
|.+.||+|.|++-.-+++ +++++...+.+| ++....+.+..-+...++. .++++.+++.+++++.+
T Consensus 1 MlL~IDIGNT~ik~gl~~-~~~l~~~~r~~T-~~~~t~de~~~~l~~ll~~---------~~~~~~~i~~iiISSVv 66 (268)
T 2h3g_X 1 MIFVLDVGNTNAVLGVFE-EGELRQHWRMET-DRHKTEDEYGMLVKQLLEH---------EGLSFEDVKGIIVSSVV 66 (268)
T ss_dssp CEEEEEECSSEEEEEEEE-TTEEEEEEEEEC-CTTCCHHHHHHHHHHHHHH---------TTCCGGGCCEEEEEESC
T ss_pred CEEEEEECcCcEEEEEEE-CCEEEEEEEecC-CCcCCHHHHHHHHHHHHHH---------cCCCcccCcEEEEEccC
Confidence 358899999999998885 456455666643 3444445566666666654 23455678888777753
No 51
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=77.16 E-value=2.6 Score=47.23 Aligned_cols=48 Identities=21% Similarity=0.028 Sum_probs=31.7
Q ss_pred CceEEEEeccCccccEEEEe-cCCceEEEEEeccCCCCCCCChHHHHHHHHHH
Q 001049 7 EKLRFCIDRGGTFTDVYAEI-PGQLEGQVLKLLSVDPTNYDDAPVEGIRRILE 58 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~-~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~ 58 (1173)
+.+.||||+|||++-+.++| ++|+++...+.++. ..+.+.+.|.+.++
T Consensus 13 ~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~----~~~~~~~~i~~~~~ 61 (332)
T 1sz2_A 13 TKYALVGDVGGTNARLALCDIASGEISQAKTYSGL----DYPSLEAVIRVYLE 61 (332)
T ss_dssp -CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG----GCSCHHHHHHHHHH
T ss_pred CCEEEEEEechhheEEEEEECCCCcEEEEEEecCC----CcCCHHHHHHHHHH
Confidence 45899999999999999998 56774444444432 12345565555554
No 52
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=75.67 E-value=2.7 Score=45.71 Aligned_cols=63 Identities=14% Similarity=0.152 Sum_probs=39.8
Q ss_pred eEEEEeccCccccEEEEecCCceEEEEEeccCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEEEEehhH
Q 001049 9 LRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRMGTTV 85 (1173)
Q Consensus 9 ~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i~hGTT~ 85 (1173)
|.+.||+|+|++-.-+++ +++++...+.+| ++....+.+..-+...++. +..+++.+.+++.+
T Consensus 4 M~L~IDIGNT~ik~gl~~-~~~l~~~~r~~T-~~~~t~de~~~~l~~l~~~------------~~~~i~~i~IsSVv 66 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-DGKTFRRWRLST-GVFQTEDELFSHLHPLLGD------------AMREIKGIGVASVV 66 (249)
T ss_dssp EEEEEEECSSEEEEEEES-SSSSCEEEEEEC-CTTCCHHHHHHHHHHHHGG------------GGGGEEEEEEEESC
T ss_pred eEEEEEECCCeEEEEEEE-CCEEEEEEEecC-CCCCCHHHHHHHHHHHHhh------------ccccCCEEEEEcCc
Confidence 579999999999998885 455456667643 3333334444444444321 23467788888765
No 53
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=75.06 E-value=3.1 Score=47.45 Aligned_cols=50 Identities=18% Similarity=0.019 Sum_probs=34.8
Q ss_pred CceEEEEeccCccccEEEEec----CCceEEEEEeccCCCCCCCChHHHHHHHHHHH
Q 001049 7 EKLRFCIDRGGTFTDVYAEIP----GQLEGQVLKLLSVDPTNYDDAPVEGIRRILEE 59 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~----~g~~~~~~K~~st~p~~~~~~~~~gi~~~l~~ 59 (1173)
++|.||||+|||+|-++++|. +|+++...|..++ ...+.+++.|...+++
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~~~~---~~~~~~~~~i~~~i~~ 81 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDSVHACVTRYSMKR---KDITEIIEFFNEIIEL 81 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEECTT---CBGGGHHHHHHHHHHH
T ss_pred CCeEEEEEEccccEEEEEEecccCCCccEEEEeeecCC---CCHHHHHHHHHHHHHH
Confidence 468999999999999999986 7774444442332 2245577777776654
No 54
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=72.52 E-value=2.7 Score=46.80 Aligned_cols=32 Identities=13% Similarity=-0.009 Sum_probs=25.8
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEecc
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLS 39 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~s 39 (1173)
+|.+|||+|||++-+.++|.+|+++...+.+|
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~G~il~~~~~~t 34 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGREDGTIIDRIEFPT 34 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTTSCEEEEEEEEC
T ss_pred cEEEEEEECcceeEEEEEECCCcEEEEEEecC
Confidence 57899999999999999987788555555543
No 55
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=71.57 E-value=6 Score=45.47 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch
Q 001049 456 DIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG 496 (1173)
Q Consensus 456 eaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG 496 (1173)
+.|..+++.+...++.+|..+..--+-||. .+.|||+-
T Consensus 268 ~~a~~~l~~~~~~la~~i~~l~~~l~~~p~---~IvlgGgi 305 (381)
T 1saz_A 268 EWAKRVYRAMAYQIAKWIGKMAAVLKGEVD---FIVLTGGL 305 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCS---EEEEEEGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCC---EEEEeCcC
Confidence 567788999999999999988877544664 45566653
No 56
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=70.87 E-value=5.3 Score=43.61 Aligned_cols=31 Identities=16% Similarity=0.006 Sum_probs=24.7
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEec
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLL 38 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~ 38 (1173)
+|.+|||+|+|.|.++++|++|+++...+.+
T Consensus 3 ~~~lGiD~Gst~~k~~l~d~~g~i~~~~~~~ 33 (270)
T 1hux_A 3 IYTLGIDVGSTASKCIILKDGKEIVAKSLVA 33 (270)
T ss_dssp CEEEEEEECSSEEEEEEEETTTEEEEEEEEE
T ss_pred cEEEEEEeccceEEEEEEeCCCCEEEEEEec
Confidence 4889999999999999998778844444444
No 57
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=70.22 E-value=4.7 Score=43.64 Aligned_cols=53 Identities=13% Similarity=-0.005 Sum_probs=33.3
Q ss_pred ceEEEEeccCccccEEEEecC-CceEE-EEEeccCCCCCCCChHHHHHHHHHHHhh
Q 001049 8 KLRFCIDRGGTFTDVYAEIPG-QLEGQ-VLKLLSVDPTNYDDAPVEGIRRILEEYT 61 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~-g~~~~-~~K~~st~p~~~~~~~~~gi~~~l~~~~ 61 (1173)
++.||||+|||++.++++|-+ |+++. ..+.++ ++....+.+++-|.++++++.
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~~ 66 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPT-PQPATPESVAEAVALVVAELS 66 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEEC-CSSCCHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEEEecCC-CccCCHHHHHHHHHHHHHHHH
Confidence 468999999999999999854 66321 224433 122223455666666666653
No 58
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=67.62 E-value=5 Score=46.07 Aligned_cols=48 Identities=19% Similarity=0.118 Sum_probs=31.9
Q ss_pred CCCceEEEEeccCccccEEEEecCCceEEEE-EeccCCCCCCCChHHHHHHH
Q 001049 5 KEEKLRFCIDRGGTFTDVYAEIPGQLEGQVL-KLLSVDPTNYDDAPVEGIRR 55 (1173)
Q Consensus 5 ~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~-K~~st~p~~~~~~~~~gi~~ 55 (1173)
.+..+.||||+|||++-++++| +|+++... +.++ +....+.+++-|.+
T Consensus 6 ~d~~~~lgiDIGgt~i~~~l~d-~G~il~~~~~~~~--~~~~~~~~l~~i~~ 54 (366)
T 3mcp_A 6 NDNRIVMTLDAGGTNFVFSAIQ-GGKEIADPVVLPA--CADCLDKCLGNLVE 54 (366)
T ss_dssp TCCCEEEEEECSSSEEEEEEEE-TTEECSCCEEEEC--CTTCHHHHHHHHHH
T ss_pred CCCCEEEEEEECcceEEEEEEE-CCEEEEEEEEEEC--CCCCHHHHHHHHHH
Confidence 3556899999999999999998 88843333 4543 22123445555555
No 59
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=67.13 E-value=3.4 Score=45.90 Aligned_cols=30 Identities=23% Similarity=0.380 Sum_probs=23.3
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEecc
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLS 39 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~s 39 (1173)
.+.+|||+|+|.|.+|++ ++++ +...|.++
T Consensus 20 ~~~iGIDiGsTt~K~V~~-~~~~-i~~~~~~~ 49 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQE-QDNQ-RTFKTELT 49 (287)
T ss_dssp -CEEEEEECSSEEEEEEE-CSSC-EEEEEEEG
T ss_pred CeEEEEEEChhhEEEEEE-cCCE-EEEEEech
Confidence 589999999999999999 4567 55556543
No 60
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=66.78 E-value=7 Score=46.20 Aligned_cols=54 Identities=9% Similarity=-0.071 Sum_probs=36.8
Q ss_pred CCCceEEEEeccCccccEEEEecCCce---EEEEEeccCCCCC----CCChHHHHHHHHHHHh
Q 001049 5 KEEKLRFCIDRGGTFTDVYAEIPGQLE---GQVLKLLSVDPTN----YDDAPVEGIRRILEEY 60 (1173)
Q Consensus 5 ~~~~~rigIDvGGTfTD~v~~~~~g~~---~~~~K~~st~p~~----~~~~~~~gi~~~l~~~ 60 (1173)
++....++||+|||+.-+.+++.+|+. +...|.+ + |++ ..+.+++-|...+.++
T Consensus 58 ~E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~-i-p~~~~~~~~~~lfd~Ia~~i~~~ 118 (457)
T 2yhx_A 58 AQAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSL-A-AAMSTTAIPSDLWGNXAXSNAAF 118 (457)
T ss_dssp CCCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEC-C-TTTTSCSCTHHHHHHHHHHHHHH
T ss_pred CccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEE-c-CCccCCCCHHHHHHHHHHHHHHH
Confidence 356677999999999999999766763 2344443 2 443 3456777777777654
No 61
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=65.80 E-value=5.6 Score=44.47 Aligned_cols=41 Identities=17% Similarity=0.182 Sum_probs=32.3
Q ss_pred eEEEEcCchhh--hHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 488 ALACFGGAGPQ--HACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 488 ~LvafGGaGpl--ha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.++..||+.-+ ..-.+.++++++ |.++.+|....|.|+++.
T Consensus 280 ~IvL~GG~s~~p~l~~~l~~~~~~~-v~~~~~p~~ava~Gaa~~ 322 (344)
T 1jce_A 280 GIFLTGGGSLLRGLDTLLQKETGIS-VIRSEEPLTAVAKGAGMV 322 (344)
T ss_dssp CEEEESGGGCSBTHHHHHHHHHSSC-EEECSSTTTHHHHHHHHG
T ss_pred cEEEECccccchHHHHHHHHHHCCC-ccccCChHHHHHHHHHHH
Confidence 36677887744 667888999986 788999999999998754
No 62
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=62.41 E-value=7.8 Score=41.93 Aligned_cols=23 Identities=17% Similarity=0.083 Sum_probs=20.9
Q ss_pred ceEEEEeccCccccEEEEecCCc
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQL 30 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~ 30 (1173)
||.||||+|+|+||+|++|++++
T Consensus 1 M~~lGID~GsT~tk~av~d~~~~ 23 (276)
T 4ehu_A 1 MYTMGLDIGSTASKGVILKNGED 23 (276)
T ss_dssp CEEEEEEECSSCEEEEEEETTTE
T ss_pred CeEEEEEcCccEEEEEEEECCCe
Confidence 58999999999999999987777
No 63
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=59.65 E-value=5.2 Score=46.69 Aligned_cols=79 Identities=9% Similarity=0.029 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCCceEEEEcCchhhh--HHHHHHHcCCCEEEE-------C-
Q 001049 453 TVEDIALGFVNVANETMCRPIRQLTEMKGHE-------TRNHALACFGGAGPQH--ACAIARSLGMREVLI-------H- 515 (1173)
Q Consensus 453 ~~eeaA~gi~~ia~~~Ma~air~~~~~rG~d-------prdf~LvafGGaGplh--a~~lA~~lGi~~Viv-------P- 515 (1173)
+.++.+ .+++-..+.+.+.|+......|++ -..-.++..||+.-+. .-.+.+.+|++ |.+ |
T Consensus 290 s~~~l~-~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~-vri~~~~~~~p~ 367 (419)
T 4a2a_A 290 TAKKLS-VIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSP-VRTGCYANSDRP 367 (419)
T ss_dssp EHHHHH-HHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSC-EEECCGGGSSSC
T ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCC-eEEEecCCCCch
Confidence 444443 445555666777778777777763 1122355567776443 34677789987 443 4
Q ss_pred ---------CCCCccchhcccccceeE
Q 001049 516 ---------RFCGILSAYGMGLADVVE 533 (1173)
Q Consensus 516 ---------~~~~v~sA~G~~~ad~~~ 533 (1173)
..|....|+|+++.-...
T Consensus 368 ~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 368 SIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred hccCcccccCCchHHHHHHHHHHHhhc
Confidence 356778899999875443
No 64
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=59.20 E-value=3.1 Score=50.10 Aligned_cols=75 Identities=12% Similarity=-0.123 Sum_probs=46.2
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEecc--CCCC-----------------CCCChHHHHHHHHHHHhhCCCCCC
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLS--VDPT-----------------NYDDAPVEGIRRILEEYTGEKIPR 67 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~s--t~p~-----------------~~~~~~~~gi~~~l~~~~~~~~~~ 67 (1173)
++|.||||+|.|.+-++++|.+|+++.....+- ..|+ |+.+-..+++..+.+.+..
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l~~----- 83 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKMKA----- 83 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETTCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHHHH-----
T ss_pred CCEEEEEEEcCcCEEEEEECCCCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHHHH-----
Confidence 359999999999999999998888555554431 1121 1112234555555544321
Q ss_pred CCCCCCCCeeEEEEehhHhh
Q 001049 68 TSKIPTDKIEWIRMGTTVAT 87 (1173)
Q Consensus 68 ~~~~~~~~v~~i~hGTT~at 87 (1173)
.++++++|..|-..++.-+
T Consensus 84 -~~~~~~~I~aIgis~q~~~ 102 (538)
T 4bc3_A 84 -SGFDFSQVLALSGAGQQHG 102 (538)
T ss_dssp -TTCCGGGEEEEEEEECSSC
T ss_pred -cCCChHHeEEEEeccccee
Confidence 2345678888877775433
No 65
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=56.81 E-value=5.8 Score=44.93 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=19.3
Q ss_pred CCEEEEecCCCceEEeeee-ceee
Q 001049 312 KPLIGFDMGGTSTDVSRYA-GSYE 334 (1173)
Q Consensus 312 ~~~I~~DmGGTStDv~li~-G~~~ 334 (1173)
..++++|+||.|||++++. |.+.
T Consensus 191 ~~~~vvDiGggttdi~i~~~g~~~ 214 (377)
T 2ych_A 191 RVFLVLDIGAESTSLVLLRGDKPL 214 (377)
T ss_dssp CEEEEEEECSSCEEEEEEETTEEE
T ss_pred CeEEEEEECCCcEEEEEEECCEEE
Confidence 3479999999999999996 7653
No 66
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=56.48 E-value=7.2 Score=44.12 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=26.2
Q ss_pred ecccchhhHHHHHHhcccccC--CCCEEEEecCCCceEEeeee
Q 001049 290 VLSGPAGGVVGYSQTLFGLET--EKPLIGFDMGGTSTDVSRYA 330 (1173)
Q Consensus 290 i~SGPa~Gv~Ga~~l~~~~~g--~~~~I~~DmGGTStDv~li~ 330 (1173)
+..=|.|..+++ +...... ..+++++|+||.|||++++.
T Consensus 168 li~Ep~AAa~~~--l~~~~~~~~~~~vlVvDIGgGTtDv~vi~ 208 (346)
T 2fsj_A 168 MRPQGVGAALYL--LNQGIIEQQPGYGVVIDVGSRTTDVLTIN 208 (346)
T ss_dssp EEETTHHHHHHH--HHHTSSCCCSSEEEEEEECSSCEEEEEEE
T ss_pred EEccHHHHHHHh--hccccccccCCcEEEEECCCCcEEEEEEE
Confidence 455667766765 2111111 24579999999999999996
No 67
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=53.95 E-value=24 Score=41.57 Aligned_cols=74 Identities=11% Similarity=0.097 Sum_probs=50.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchh--hhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGP--QHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGp--lha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+.++.+.++++=..-++...++.+- +.|..++. |.+-||+.- +..-.+|+.+|++ |.+|+.....+|+|+++.
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~~~~l~-~~g~~~~~--i~~~GG~a~s~~~~Qi~Adv~g~p-V~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADGMDVVH-ACGIKPQS--VTLIGGGARSEYWRQMLADISGQQ-LDYRTGGDVGPALGAARL 431 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH-TTTCCCSC--EEEESGGGCCHHHHHHHHHHHCCC-EEEESCTTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCcce--EEEEeccccCHHHHHHHHHHhCCe-EEeCCCCCcccHHHHHHH
Confidence 45666666666666556666665553 34766654 455566543 5566789999988 888888777789998764
No 68
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=46.72 E-value=20 Score=42.29 Aligned_cols=69 Identities=10% Similarity=-0.049 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCc----hhhhHHHHHH----HcC-CCEEEECCCCCccchhcc
Q 001049 456 DIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGA----GPQHACAIAR----SLG-MREVLIHRFCGILSAYGM 526 (1173)
Q Consensus 456 eaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGa----Gplha~~lA~----~lG-i~~VivP~~~~v~sA~G~ 526 (1173)
++|..|++-+..-.+.+|-.+....+ |..+ .|++||+ +|..-..+.+ .++ -++|.+- .+.-.|.+|+
T Consensus 365 ~va~~V~~RaA~lla~~ia~i~~~~~--~~~~-~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~-l~~dgs~iGA 440 (451)
T 1bdg_A 365 YACEMVVKRAAYLAGAGIACILRRIN--RSEV-TVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR-LSEDGSGKGA 440 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC--CSEE-EEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE-ECTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--CCce-EEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE-ECCCccHHHH
Confidence 57778888888888888877777754 5444 5667765 2222222333 332 2333332 4555666666
Q ss_pred cc
Q 001049 527 GL 528 (1173)
Q Consensus 527 ~~ 528 (1173)
++
T Consensus 441 Al 442 (451)
T 1bdg_A 441 AA 442 (451)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 69
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=44.16 E-value=16 Score=47.02 Aligned_cols=55 Identities=11% Similarity=0.074 Sum_probs=35.5
Q ss_pred CCCCceEEEEeccCccccEEEEecCCc----e-EEEEEeccCCCC----CCCChHHHHHHHHHHHh
Q 001049 4 VKEEKLRFCIDRGGTFTDVYAEIPGQL----E-GQVLKLLSVDPT----NYDDAPVEGIRRILEEY 60 (1173)
Q Consensus 4 ~~~~~~rigIDvGGTfTD~v~~~~~g~----~-~~~~K~~st~p~----~~~~~~~~gi~~~l~~~ 60 (1173)
.++....+|||+|||++-+.+++.+|+ + +...|.++ |. ...+.+++-|...+.++
T Consensus 74 G~E~G~~laiDlGGTnirv~lv~~~G~~~~~i~~~~~~~~i--p~~~~~~~~~~lf~~Ia~~i~~~ 137 (917)
T 1cza_N 74 GSEKGDFIALDLGGSSFRILRVQVNHEKNQNVHMESEVYDT--PENIVHGSGSQLFDHVAECLGDF 137 (917)
T ss_dssp SCCCEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEECC--CHHHHSSBHHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEEeCCCeEEEEEEEecCCCcceEEEEEEEEEC--CcccccCCHHHHHHHHHHHHHHH
Confidence 456677899999999999999975443 2 33445542 42 22345666666666554
No 70
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=41.42 E-value=13 Score=45.43 Aligned_cols=64 Identities=13% Similarity=0.060 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCc-eEEEEcCchhhh--HHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 464 VANETMCRPIRQLTEMKGHETRNH-ALACFGGAGPQH--ACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 464 ia~~~Ma~air~~~~~rG~dprdf-~LvafGGaGplh--a~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
-..+.+...|+......|+++.+. .++..||+.-+- --.+.+.+|.+ +..+.+|.-.-|+|+++
T Consensus 311 ~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~-~~~~~nPdeaVA~GAai 377 (605)
T 4b9q_A 311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE-PRKDVNPDEAVAIGAAV 377 (605)
T ss_dssp HHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSC-CCSSSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccC-cCCCcChhHHHHHhHHH
Confidence 344556666777777777776643 456667776433 34677777855 55666677777777654
No 71
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=41.00 E-value=10 Score=43.54 Aligned_cols=76 Identities=13% Similarity=0.090 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc-eEEEEcCchhhhH--HHHHHHcCCC-EEE------ECCCCCcc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNH-ALACFGGAGPQHA--CAIARSLGMR-EVL------IHRFCGIL 521 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf-~LvafGGaGplha--~~lA~~lGi~-~Vi------vP~~~~v~ 521 (1173)
++.++.. .+++-..+.+.+.|+....+.|+++.+. .++..||++-+-. -.+.+.+|.+ +|+ .+.+|.-.
T Consensus 311 itr~~~~-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~a 389 (409)
T 4gni_A 311 INRLRYE-TIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSEL 389 (409)
T ss_dssp EEHHHHH-HHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTH
T ss_pred eeHHHHH-HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHH
Confidence 3444443 2334444556666666666667765432 3455566654433 3566777876 563 34577777
Q ss_pred chhcccc
Q 001049 522 SAYGMGL 528 (1173)
Q Consensus 522 sA~G~~~ 528 (1173)
-|.|+++
T Consensus 390 va~GAa~ 396 (409)
T 4gni_A 390 QARGAAL 396 (409)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7888765
No 72
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=39.83 E-value=18 Score=41.08 Aligned_cols=25 Identities=20% Similarity=0.020 Sum_probs=20.7
Q ss_pred CCCCEEEEecCCCceEEeeee-ceee
Q 001049 310 TEKPLIGFDMGGTSTDVSRYA-GSYE 334 (1173)
Q Consensus 310 g~~~~I~~DmGGTStDv~li~-G~~~ 334 (1173)
|....+++|+||.+|||+.|. |.+.
T Consensus 146 g~~~~lVvDiG~gtt~v~~v~~G~~~ 171 (375)
T 2fxu_A 146 GRTTGIVLDSGDGVTHNVPIYEGYAL 171 (375)
T ss_dssp TCSSEEEEEECSSCEEEEEEETTEEC
T ss_pred CCCeEEEEEcCCCceEEeEeECCEEe
Confidence 456899999999999999884 7653
No 73
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=39.56 E-value=11 Score=46.55 Aligned_cols=63 Identities=13% Similarity=0.101 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCc-eEEEEcCchhh--hHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 465 ANETMCRPIRQLTEMKGHETRNH-ALACFGGAGPQ--HACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 465 a~~~Ma~air~~~~~rG~dprdf-~LvafGGaGpl--ha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
..+.+...|+......|+++.+. .++..||+.-+ ..-.|.+.+|.+ +..+.+|.-.-|+|+++
T Consensus 313 l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~-~~~~~nPdeaVA~GAa~ 378 (675)
T 3d2f_A 313 LLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKP-LSTTLNQDEAIAKGAAF 378 (675)
T ss_dssp HHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSC-EECCSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCC-ccccCCcchHHHHHHHH
Confidence 34556667777777777776543 45566777633 344677788854 67788888888888864
No 74
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=39.37 E-value=15 Score=44.38 Aligned_cols=64 Identities=11% Similarity=0.056 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCc-eEEEEcCchhhh--HHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 465 ANETMCRPIRQLTEMKGHETRNH-ALACFGGAGPQH--ACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 465 a~~~Ma~air~~~~~rG~dprdf-~LvafGGaGplh--a~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
..+.+.+.|+....+.|+++.+. .++..||+.-+- .-.|.+.++-.++..+.+|.-.-|+|+++
T Consensus 309 ~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~ 375 (554)
T 1yuw_A 309 LFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAV 375 (554)
T ss_dssp HHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHH
Confidence 34556677777777777776654 455567665442 33567778644577778888888888875
No 75
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=39.06 E-value=13 Score=42.11 Aligned_cols=30 Identities=23% Similarity=0.521 Sum_probs=0.0
Q ss_pred HHHhccccc---CCCCEEEEecCCCceEEeeee
Q 001049 301 YSQTLFGLE---TEKPLIGFDMGGTSTDVSRYA 330 (1173)
Q Consensus 301 a~~l~~~~~---g~~~~I~~DmGGTStDv~li~ 330 (1173)
|+.+++... ....++++|+||.|||++++.
T Consensus 174 Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~ 206 (383)
T 1dkg_D 174 AAALAYGLDKGTGNRTIAVYDLGGGTFDISIIE 206 (383)
T ss_dssp HHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEE
No 76
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=38.88 E-value=18 Score=44.17 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCc-eEEEEcCchhh--hHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 467 ETMCRPIRQLTEMKGHETRNH-ALACFGGAGPQ--HACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 467 ~~Ma~air~~~~~rG~dprdf-~LvafGGaGpl--ha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
+.+.+.|+......|+++.+. .++..||+.-+ ..-.+.+.+|.+ +..+.+|.-+-|+|+++
T Consensus 314 ~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~-~~~~~npd~aVA~GAa~ 377 (605)
T 2kho_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKE-PRKDVNPDEAVAIGAAV 377 (605)
T ss_dssp GGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSC-CBCSSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCC-cCcCCCcchHHHHHHHH
Confidence 345556666666666655432 34445665533 333566667754 55666777777777664
No 77
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=34.75 E-value=74 Score=34.83 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=70.7
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHCCCcEEEEEccCcCCCchhHHHHHHHHHhc-CCceeeeeccccCcCCcccchhHHH
Q 001049 162 GELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGL-GFRHVSLSSALTPMVRAVPRGLTAS 240 (1173)
Q Consensus 162 g~~g~v~~plde~~v~~~~~~l~~~gv~avAV~~l~S~~np~hE~rv~ei~~~~-~~~~Vs~S~ei~p~~~e~eR~~Ttv 240 (1173)
|.+|-++-.|..++..+..+.+++.|++.|-++ +...+ +.|++++.+.. +++++..+..+... |
T Consensus 125 GvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lv---ap~t~--~eri~~i~~~~~gfiY~vs~~GvTG~-----~----- 189 (271)
T 3nav_A 125 GVDSVLIADVPTNESQPFVAAAEKFGIQPIFIA---PPTAS--DETLRAVAQLGKGYTYLLSRAGVTGA-----E----- 189 (271)
T ss_dssp TCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEE---CTTCC--HHHHHHHHHHCCSCEEECCCC----------------
T ss_pred CCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEE---CCCCC--HHHHHHHHHHCCCeEEEEeccCCCCc-----c-----
Confidence 344467766777788888999999999865444 43333 56899998876 66544333334432 1
Q ss_pred HHhcchHHHHHHHHHHHHHHHhcCCCceEEEEEcCCCccccccccccceecccchhhHHHHHHh
Q 001049 241 VDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQT 304 (1173)
Q Consensus 241 lNAyl~p~~~~yl~~l~~~L~~~~~~~~l~im~s~GG~~s~~~~~pv~ti~SGPa~Gv~Ga~~l 304 (1173)
.-+.+-+..+++++++.. +.|+.+ .+|+-+.++++ +.+..|.-+-++|++.+
T Consensus 190 --~~~~~~~~~~v~~vr~~~-----~~Pv~v---GfGIst~e~~~--~~~~~gADgvIVGSAiv 241 (271)
T 3nav_A 190 --TKANMPVHALLERLQQFD-----APPALL---GFGISEPAQVK--QAIEAGAAGAISGSAVV 241 (271)
T ss_dssp ----CCHHHHHHHHHHHHTT-----CCCEEE---CSSCCSHHHHH--HHHHTTCSEEEESHHHH
T ss_pred --cCCchhHHHHHHHHHHhc-----CCCEEE---ECCCCCHHHHH--HHHHcCCCEEEECHHHH
Confidence 122345667777665532 457776 88888887753 14556666667777665
No 78
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=33.96 E-value=85 Score=37.95 Aligned_cols=65 Identities=15% Similarity=0.042 Sum_probs=39.0
Q ss_pred ceEEEEeccCccccEEEEe-cCCce--EEEEEeccCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeE
Q 001049 8 KLRFCIDRGGTFTDVYAEI-PGQLE--GQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEW 78 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~-~~g~~--~~~~K~~st~p~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~ 78 (1173)
+|.+|||+|-|.|-+++-+ .+|++ +...+++||=- .-+..-++|+.++|++++.+ .+...++++.
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi-KGt~~Ni~g~~~si~~a~~~-----a~~~~~d~~l 69 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM-KGTRDNIAGTLAALEQALAK-----TPWSMSDVSR 69 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS-TTSGGGHHHHHHHHHHHHTT-----SSCCGGGEEE
T ss_pred cEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc-ceeeeCHHHHHHHHHHHHHH-----hCCcccCceE
Confidence 5889999999999877643 23542 55667776521 11222356666666666543 2344456655
No 79
>1unn_C POL IV, DNA polymerase IV; beta-clamp, translesion, transferase, DNA-directed D polymerase, DNA replication; HET: DNA; 1.9A {Escherichia coli} SCOP: d.240.1.1
Probab=32.50 E-value=3e+02 Score=25.40 Aligned_cols=92 Identities=10% Similarity=0.052 Sum_probs=57.0
Q ss_pred EEEEeeccCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeeecCe-eEEEEEecccccCCCcccHHHHHHH
Q 001049 536 QEPYSAVYGPESVLEVSRREGILSKQVKQKLQEQGFREESITTETYLNLRYEGT-DTAIMVKKRIAEDGSGCGYAVDFEK 614 (1173)
Q Consensus 536 ~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~l~~~G~~~~~~~~~~~~d~RY~GQ-~~~l~v~~~~~~~~~~~~~~~~F~~ 614 (1173)
++|+...+ .+.+.+.+.+.+|.+++.+.|+++| ....+. ...+-+||..- .+.-....|. .+...+.+.-.+
T Consensus 10 e~Tf~~d~--~~~~~l~~~l~~l~~~v~~rLr~~~-~~~tV~-k~~vkir~~dF~~~trs~t~pt---~~~~~i~~~a~~ 82 (115)
T 1unn_C 10 ERTMAEDI--HHWSECEAIIERLYPELERRLAKVK-PDLLIA-RQGVKLKFDDFQQTTQEHVWPR---LNKADLIATARK 82 (115)
T ss_dssp EEEEEEEE--CCHHHHHHHHHHHHHHHHHHHHHHC-TTCBCS-EEEEEEEETTSCEEEEEEECSB---CCHHHHHHHHHH
T ss_pred ceECCCCC--CCHHHHHHHHHHHHHHHHHHHHhhC-CCCeEE-EeEEEEEECCCCeEEeccccCc---CCHHHHHHHHHH
Confidence 44554444 3678899999999999999999999 655554 22355777432 2232222222 133466666677
Q ss_pred HHHHHhccccCCCcEEEEEEEEEE
Q 001049 615 LFQQEYGFKLQNRNILVCDVRVRG 638 (1173)
Q Consensus 615 ~h~~~yg~~~~~~~vei~~~rv~~ 638 (1173)
.+++.| ++.+|-.+.+++..
T Consensus 83 Ll~~~~----~~~~vRllGV~ls~ 102 (115)
T 1unn_C 83 TWDERR----GGRGVRLVGLHVTL 102 (115)
T ss_dssp HHHHHC----TTCCEEEEEEEEEC
T ss_pred HHHhhh----cCCCEEEEEEEEeC
Confidence 777765 24677666666553
No 80
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=32.36 E-value=58 Score=38.46 Aligned_cols=72 Identities=11% Similarity=-0.045 Sum_probs=44.6
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccC--CCC------CCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEE
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPT------NYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWI 79 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~------~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i 79 (1173)
++.||||+|+|.+-++++|.+|+++...+.++. .|. | ++.+.+.+..+++++... .+++.++|..|
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~p~~g~~e~d-~~~~~~~i~~~i~~~~~~-----~~~~~~~i~~I 75 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLEGRPVAVAKREFRQLYPKPGWVEHD-PLEIWETTLWAAREVLRR-----AGAEAGEVLAL 75 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTTSCEEEEEEEECCEECSSTTCCEEC-HHHHHHHHHHHHHHHHHH-----TTCCGGGCCEE
T ss_pred cEEEEEeeCCcceEEEEECCCCCEEEEEEEeeceecCCCCcEeeC-HHHHHHHHHHHHHHHHHh-----cCCCcccEEEE
Confidence 367999999999999999878885555555431 011 2 233556666666554321 12344567777
Q ss_pred EEehhH
Q 001049 80 RMGTTV 85 (1173)
Q Consensus 80 ~hGTT~ 85 (1173)
-++++.
T Consensus 76 gis~~~ 81 (495)
T 2dpn_A 76 GITNQR 81 (495)
T ss_dssp EEEECS
T ss_pred EEeCCC
Confidence 777653
No 81
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=32.14 E-value=71 Score=37.70 Aligned_cols=72 Identities=15% Similarity=0.054 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchh--hhHHHHHHHcCCCEEEECCCCCccchhccccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGP--QHACAIARSLGMREVLIHRFCGILSAYGMGLA 529 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGp--lha~~lA~~lGi~~VivP~~~~v~sA~G~~~a 529 (1173)
.+..+.+.++++=..-++...++.+- +.+ .++ .|++-||+.- +..-.+|+.+|++ |.+|.... .+|+|+++.
T Consensus 364 ~~~~~l~rAvlEgia~~~~~~l~~l~-~~~-~~~--~i~~~GG~a~s~~~~Qi~Adv~g~p-V~~~~~~e-~~alGaA~l 437 (497)
T 2zf5_O 364 TGREHLARATLEAIAYLTRDVVDEME-KLV-QIK--ELRVDGGATANDFLMQFQADILNRK-VIRPVVKE-TTALGAAYL 437 (497)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHT-TTS-CCC--CEEEESGGGGCHHHHHHHHHHHTSC-EEEESCSC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHH-hcC-Ccc--eEEEeCccccCHHHHHHHHhhcCCe-EEEcCCCc-chHHHHHHH
Confidence 45666666666655555555555442 334 443 3555666543 5666789999988 77787655 789998764
No 82
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=32.05 E-value=23 Score=40.29 Aligned_cols=23 Identities=22% Similarity=0.248 Sum_probs=19.6
Q ss_pred CCCEEEEecCCCceEEeeee-cee
Q 001049 311 EKPLIGFDMGGTSTDVSRYA-GSY 333 (1173)
Q Consensus 311 ~~~~I~~DmGGTStDv~li~-G~~ 333 (1173)
..+++++|+||.|||++++. |.+
T Consensus 183 ~~~~~vvDiGggTtd~~v~~~~~~ 206 (355)
T 3js6_A 183 EGKYSVLDFGSGTTIIDTYQNMKR 206 (355)
T ss_dssp TCEEEEEEECSSCEEEEEEETTEE
T ss_pred cCcEEEEEeCCCcEEEEEEcCCEE
Confidence 35689999999999999996 666
No 83
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=30.43 E-value=35 Score=37.17 Aligned_cols=20 Identities=30% Similarity=0.224 Sum_probs=17.1
Q ss_pred EEEEecCCCceEEeeee-cee
Q 001049 314 LIGFDMGGTSTDVSRYA-GSY 333 (1173)
Q Consensus 314 ~I~~DmGGTStDv~li~-G~~ 333 (1173)
+|.+|+|||++++++++ |+.
T Consensus 2 ~lgiDiGGT~~~~~l~d~g~i 22 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAKEGKS 22 (291)
T ss_dssp EEEEEECSSEEEEEEEETTEE
T ss_pred EEEEEeCccceEEEEEeCCeE
Confidence 68999999999999996 543
No 84
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=30.01 E-value=1.3e+02 Score=33.58 Aligned_cols=60 Identities=13% Similarity=0.235 Sum_probs=42.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchhhhHHH---HHHHc---CCCEEEECCC
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACA---IARSL---GMREVLIHRF 517 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGplha~~---lA~~l---Gi~~VivP~~ 517 (1173)
.+.++.|.++.+...+.+.+.++....+.|.+ . +++.|+=.+.... +.+.+ |+ +|++|+.
T Consensus 215 ~~~~diAa~fq~~l~~~l~~~~~~~~~~~~~~----~-vvlsGGVa~N~~l~~~l~~~l~~~g~-~v~~p~~ 280 (330)
T 2ivn_A 215 YRVEDLAYSFQETAFAALVEVTERAVAHTEKD----E-VVLVGGVAANNRLREMLRIMTEDRGI-KFFVPPY 280 (330)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS----E-EEEESGGGGCHHHHHHHHHHHHHHTC-EEECCCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----e-EEEEccHHHHHHHHHHHHHHHHHcCC-EEEecCC
Confidence 46899999999999999999999988887765 2 4455554444432 33333 66 6888884
No 85
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=29.92 E-value=78 Score=37.39 Aligned_cols=71 Identities=13% Similarity=0.013 Sum_probs=43.7
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccCC--CC------CCCChHHHHHHHHHHHhhCCCCCCCC--CCCCCCee
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSVD--PT------NYDDAPVEGIRRILEEYTGEKIPRTS--KIPTDKIE 77 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st~--p~------~~~~~~~~gi~~~l~~~~~~~~~~~~--~~~~~~v~ 77 (1173)
++.||||+|+|.+-++++|.+|+++...+.++.. |+ | ++.+.+.+..+++++... . +++.++|.
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~g~i~~~~~~~~~~~~~~~g~~e~d-~~~~~~~i~~~i~~~~~~-----~~~~~~~~~i~ 77 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEELNIVHSNNLNHEQKCLKPGWYEHD-PIEIMTNLYNLMNEGIKV-----LKDKYTSVIIK 77 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETTCCEEEEEEEECCCBCCSTTCCEEC-HHHHHHHHHHHHHHHHHH-----HHHHSSSCEEE
T ss_pred cEEEEEEeCCcceEEEEECCCCCEEEEEEEeeeeecCCCCcEEEC-HHHHHHHHHHHHHHHHHH-----hhcCCCccceE
Confidence 4789999999999999998888855555554310 11 1 234556666666554321 0 12345677
Q ss_pred EEEEehh
Q 001049 78 WIRMGTT 84 (1173)
Q Consensus 78 ~i~hGTT 84 (1173)
.|-+++.
T Consensus 78 ~Igis~~ 84 (503)
T 2w40_A 78 CIGITNQ 84 (503)
T ss_dssp EEEEEEC
T ss_pred EEEEcCC
Confidence 7766664
No 86
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=29.88 E-value=21 Score=40.31 Aligned_cols=20 Identities=25% Similarity=0.287 Sum_probs=16.9
Q ss_pred EEEEeccCccccEEEEecCCc
Q 001049 10 RFCIDRGGTFTDVYAEIPGQL 30 (1173)
Q Consensus 10 rigIDvGGTfTD~v~~~~~g~ 30 (1173)
-|-||+|||-||++.+. +|+
T Consensus 129 ~llvDIGsTTTDIipi~-~G~ 148 (334)
T 3cet_A 129 CILVDMGSTTTDIIPIV-EGK 148 (334)
T ss_dssp EEEEEECSSCEEEEEEE-TTE
T ss_pred EEEEEcCcchhhhhhhc-CCe
Confidence 47899999999999984 565
No 87
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=29.87 E-value=31 Score=41.00 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc-eEEEEcCchhh--hHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 452 MTVEDIALGFVNVANETMCRPIRQLTEMKGHETRNH-ALACFGGAGPQ--HACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 452 l~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf-~LvafGGaGpl--ha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
++.++.. .+++-..+.+.+.|+....+.++++.+. .++..||+.-+ ..-.+.+.+|.+ +..+.+|.-..|+|+++
T Consensus 269 itr~~fe-~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~-~~~~~~p~~aVa~Gaa~ 346 (509)
T 2v7y_A 269 LTRAKFE-ELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKE-PHKGVNPDEVVAIGAAI 346 (509)
T ss_dssp EEHHHHH-HHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSC-CBCCSCTTTHHHHHHHH
T ss_pred EEHHHHH-HHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCC-cCcCCCchhhhHhhHHH
Confidence 4444443 2233333566677777777777765543 45556666544 334577788864 66777888888888764
No 88
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=29.15 E-value=28 Score=40.01 Aligned_cols=21 Identities=29% Similarity=0.148 Sum_probs=18.6
Q ss_pred CEEEEecCCCceEEeeee-cee
Q 001049 313 PLIGFDMGGTSTDVSRYA-GSY 333 (1173)
Q Consensus 313 ~~I~~DmGGTStDv~li~-G~~ 333 (1173)
..+++|+||.+|||+.|. |.+
T Consensus 164 ~glVvDiG~gtt~v~~v~~G~~ 185 (418)
T 1k8k_A 164 TGTVIDSGDGVTHVIPVAEGYV 185 (418)
T ss_dssp CEEEEEESSSCEEEEEEETTEE
T ss_pred eEEEEEcCCCceEEEEeECCEE
Confidence 789999999999999985 755
No 89
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=27.69 E-value=80 Score=37.34 Aligned_cols=79 Identities=13% Similarity=0.082 Sum_probs=47.7
Q ss_pred ceEEEEeccCccccEEEEecCCceEEEEEeccC--CC------CCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEE
Q 001049 8 KLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DP------TNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWI 79 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p------~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i 79 (1173)
++.||||+|+|.+-++++|.+|+++...+.++. .| +| ++.+.+.+..+++++... .+++.++|..|
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~G~i~~~~~~~~~~~~p~~g~~e~d-~~~~~~~i~~~i~~~~~~-----~~~~~~~i~~I 75 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHSGEIYSTGQLEHDQIFPRAGWVEHN-PEQIWNNVREVVGLALTR-----GNLTHEDIAAV 75 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEEC-HHHHHHHHHHHHHHHHHH-----TTCCGGGEEEE
T ss_pred CEEEEEecCCcceEEEEECCCCCEEEEEEEecceecCCCCceeEC-HHHHHHHHHHHHHHHHHH-----cCCCcccEEEE
Confidence 478999999999999999878885555555431 01 12 234556666666554321 12344567777
Q ss_pred EEehhHhhhHhhh
Q 001049 80 RMGTTVATNALLE 92 (1173)
Q Consensus 80 ~hGTT~atNAlle 92 (1173)
-+++...+=.++.
T Consensus 76 gis~~g~~~v~vD 88 (504)
T 2d4w_A 76 GITNQRETAVVWD 88 (504)
T ss_dssp EEEECSSCBEEEE
T ss_pred EEeCCCCeEEEEE
Confidence 7777543333333
No 90
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=27.65 E-value=72 Score=37.97 Aligned_cols=78 Identities=18% Similarity=0.107 Sum_probs=46.1
Q ss_pred CCCceEEEEeccCccccEEEEecCCceEEEEEec--cCCCCC-C----CChHHHHHHHHHHHhhCCCCCCCCCCCCCCee
Q 001049 5 KEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLL--SVDPTN-Y----DDAPVEGIRRILEEYTGEKIPRTSKIPTDKIE 77 (1173)
Q Consensus 5 ~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~--st~p~~-~----~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~ 77 (1173)
++++|.||||+|.|.+-++++|.+|+++...+.+ ...|++ . ++.+.+++..++++++.+ .++++++|.
T Consensus 1 tekkYvlgID~GTss~Ka~l~d~~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~-----~~~~~~~I~ 75 (526)
T 3ezw_A 1 TEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK-----ADISSDQIA 75 (526)
T ss_dssp --CCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH-----HTCCGGGEE
T ss_pred CCceEEEEEEccccceeeeEEcCCCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHH-----cCCChhhEE
Confidence 3578999999999999999999888855554432 112321 0 112344444444433221 245677888
Q ss_pred EEEEehhHhh
Q 001049 78 WIRMGTTVAT 87 (1173)
Q Consensus 78 ~i~hGTT~at 87 (1173)
.|-+.++..+
T Consensus 76 aIgis~q~~~ 85 (526)
T 3ezw_A 76 AIGITNQRET 85 (526)
T ss_dssp EEEEEECSSC
T ss_pred EEEEeCCCCC
Confidence 8877665433
No 91
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=27.25 E-value=39 Score=35.00 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=41.2
Q ss_pred ccccchHHHHccccCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhhccccCCCCCCCCCHHHHHHHHH
Q 001049 392 DLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFV 462 (1173)
Q Consensus 392 ~pTvTDA~lvLG~l~p~~fl~~~g~gG~~~Ld~~~a~~a~~~ia~~lg~~~~~~~~~~~gl~~eeaA~gi~ 462 (1173)
..|.||+.++--++-+ .+..+||-+.=.+|+++||+... .|++++|+.+.|.
T Consensus 49 ~~T~tdvDIiF~KvK~---------k~~rkI~feqF~~aL~~lA~kk~----------~g~s~eE~~~~i~ 100 (184)
T 2jrf_A 49 SVTGTDVDIVFSKVKG---------KSARVINYEEFKKALEELATKRF----------KGKSKEEAFDAIC 100 (184)
T ss_dssp SSCHHHHHHHHHHHCC---------SCCSEEEHHHHHHHHHHHHHHHS----------TTSCHHHHHHHHH
T ss_pred CCChhhcchhhheecc---------CcceeecHHHHHHHHHHHHHHhc----------CCCCHHHHHHHHH
Confidence 6899999999877653 35678999999999999999872 1389999876554
No 92
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=27.20 E-value=41 Score=33.78 Aligned_cols=54 Identities=13% Similarity=0.201 Sum_probs=41.7
Q ss_pred CccccchHHHHccccCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhhccccCCCCCCCCCHHHHHHHHHH
Q 001049 391 GDLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEINSYRKSQDPSVKDMTVEDIALGFVN 463 (1173)
Q Consensus 391 G~pTvTDA~lvLG~l~p~~fl~~~g~gG~~~Ld~~~a~~a~~~ia~~lg~~~~~~~~~~~gl~~eeaA~gi~~ 463 (1173)
...|.||+.++--++-+ .+..+||-+.=.+|+++||++.- .+++++|+.+.|..
T Consensus 55 k~~T~tdvDiiF~KvK~---------k~~rkI~f~qF~~aL~~lA~kr~----------kg~~~~e~~~~i~k 108 (151)
T 1wlm_A 55 KAVTGTDVDIVFSKVKA---------KSARVINYEEFKKALEELATKRF----------KGKSKEEAFDAICQ 108 (151)
T ss_dssp SSSCHHHHHHHHHHHSC---------SSCSEEEHHHHHHHHHHTHHHHS----------SSCCHHHHHHHHHH
T ss_pred CCCChhhcceehheecc---------CccceecHHHHHHHHHHHHHHHc----------CCCCHHHHHHHHHH
Confidence 36899999999877653 35678999999999999998841 24899998865543
No 93
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=26.58 E-value=87 Score=37.09 Aligned_cols=85 Identities=14% Similarity=0.078 Sum_probs=50.2
Q ss_pred CCCCceEEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCCCCe
Q 001049 4 VKEEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPTDKI 76 (1173)
Q Consensus 4 ~~~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v 76 (1173)
|++++|.||||+|+|.+-++++|.+|+++...+.+.. .|++ -++.+.+.+..++++++.. .++++++|
T Consensus 1 m~~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~-----~~~~~~~I 75 (506)
T 3h3n_X 1 MAEKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIE-----SGIRPEAI 75 (506)
T ss_dssp -CCCCEEEEEEECSSEEEEEEEETTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH-----HTCCGGGE
T ss_pred CCCCCEEEEEEcCCCceEEEEECCCCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHH-----cCCChhhe
Confidence 4455699999999999999999988885555555431 1111 0133455555555544321 13445678
Q ss_pred eEEEEehhHhhhHhhhc
Q 001049 77 EWIRMGTTVATNALLER 93 (1173)
Q Consensus 77 ~~i~hGTT~atNAller 93 (1173)
..|-+++...+=.++.+
T Consensus 76 ~~Igis~~~~~~v~~D~ 92 (506)
T 3h3n_X 76 AGIGITNQRETTVVWDK 92 (506)
T ss_dssp EEEEEEECSSCBEEEET
T ss_pred EEEEeeCCcccEEEEeC
Confidence 77777765433333433
No 94
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=26.17 E-value=83 Score=37.33 Aligned_cols=75 Identities=17% Similarity=0.034 Sum_probs=47.3
Q ss_pred CCceEEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeE
Q 001049 6 EEKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEW 78 (1173)
Q Consensus 6 ~~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~ 78 (1173)
+++|.||||+|+|.+-++++|.+|+++...+.+.. .|++ -++.+.+.+..++++++.+ .++++++|..
T Consensus 1 ~~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~-----~~~~~~~I~~ 75 (510)
T 2p3r_A 1 EKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK-----ADISSDQIAA 75 (510)
T ss_dssp CCCEEEEEEECSSEEEEEEECTTCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH-----TTCCGGGEEE
T ss_pred CCcEEEEEEcCCcceEEEEECCCCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHH-----cCCChhheEE
Confidence 35689999999999999999888885555565431 1211 0133556666655554321 2344567877
Q ss_pred EEEehhH
Q 001049 79 IRMGTTV 85 (1173)
Q Consensus 79 i~hGTT~ 85 (1173)
|-++++.
T Consensus 76 Igis~~~ 82 (510)
T 2p3r_A 76 IGITNQR 82 (510)
T ss_dssp EEEEECS
T ss_pred EEEeCCc
Confidence 7776653
No 95
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=26.15 E-value=40 Score=35.17 Aligned_cols=75 Identities=21% Similarity=0.219 Sum_probs=43.4
Q ss_pred cceecCCCCCeecccCCCceeeccch--HHHHHHHHHhcCCCCCCcEEEecCCCCC-CCCCCCeEEEEeeee-CCeEEEE
Q 001049 773 SCALFGPDGGLVANAPHVPVHLGAMS--STVRWQLKYWRHNLNEGDVLVSNHPCAG-GSHLPDITVITPVFD-NGKLVFF 848 (1173)
Q Consensus 773 s~aI~d~~G~lva~~~~ip~h~gsm~--~~v~~~l~~~~~~l~pGDv~i~NDPy~G-g~Hl~Dv~v~~PVF~-~Gelv~~ 848 (1173)
+..|+|++|+ ++.+...+..-.... .-.+..++ -..|..++. +||.+ .+.-+=+++.+||+. +|+++|.
T Consensus 72 ~i~i~d~~G~-~~~s~~~~~~~~~~~~r~~f~~a~~-----~~~~~~~is-~p~~~~~~g~~~i~~~~pi~~~~g~~~Gv 144 (254)
T 3lif_A 72 DVAILDADGQ-LTYASVKPVPALDNSDRSYFRYHRA-----NDDHTLLIT-GPIQSRTSGVWVFVVSRRLETTDGKFFGV 144 (254)
T ss_dssp EEEEECTTSB-EEEESSSSEECCBCTTSHHHHHHHH-----CCCCCCEEE-EEEECTTTCCEEEEEEEEEECTTCCEEEE
T ss_pred eEEEECCCCC-EecCCCCCCCCCCcccHHHHHHHHh-----CCCCCeEEC-CceecCCCCcEEEEEEeeeeCCCCCEeEE
Confidence 6789999999 776544322111111 11112111 114555554 67754 345556789999998 8998887
Q ss_pred Eecccc
Q 001049 849 VASRGH 854 (1173)
Q Consensus 849 ~a~~~H 854 (1173)
++..-.
T Consensus 145 l~~~i~ 150 (254)
T 3lif_A 145 VVATIE 150 (254)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 765443
No 96
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=26.12 E-value=1e+02 Score=29.95 Aligned_cols=51 Identities=12% Similarity=0.141 Sum_probs=40.1
Q ss_pred ccccchHHHHccccCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHH--hhccccCCCCCCCCCHHHHHHHHH
Q 001049 392 DLAVTDANLILGFVIPDYFPSIFGPNEDQPLDINATREKFQKLASEI--NSYRKSQDPSVKDMTVEDIALGFV 462 (1173)
Q Consensus 392 ~pTvTDA~lvLG~l~p~~fl~~~g~gG~~~Ld~~~a~~a~~~ia~~l--g~~~~~~~~~~~gl~~eeaA~gi~ 462 (1173)
..|.||+.++--++ + .|..++|-+.=.+|+++||+.- +. .++++|+-..|.
T Consensus 61 ~iT~TdvDIiF~Kv-~---------k~~r~I~f~qF~~aL~~lA~~k~~g~----------~~~~~e~l~~ik 113 (125)
T 1pul_A 61 AITGTMTGIAFSKV-T---------GPKKKATFDETKKVLAFVAEDRARQS----------KKPIQDELDAIT 113 (125)
T ss_dssp SSCHHHHHHHHHHH-T---------CSSSCCCHHHHHHHHHHHHHHHHHHH----------TCCHHHHHHHHH
T ss_pred CCCccccceeehcc-c---------CCcceecHHHHHHHHHHHHHHhccCC----------CCCHHHHHHHHH
Confidence 68999999997776 3 4667899999999999999886 41 278888776555
No 97
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=25.40 E-value=82 Score=37.20 Aligned_cols=82 Identities=17% Similarity=0.139 Sum_probs=50.4
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEeccC--CCCC-----CCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEE
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLSV--DPTN-----YDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWI 79 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~st--~p~~-----~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i 79 (1173)
++|.||||+|+|.+-++++|.+|+++...+.+.. .|++ -++.+.+.+..++++++.+ .++++++|..|
T Consensus 5 ~~~~lgIDiGtts~k~~l~d~~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~-----~~~~~~~I~~I 79 (501)
T 3g25_A 5 EKYILSIDQGTTSSRAILFNQKGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINE-----NDVRADQIAGI 79 (501)
T ss_dssp CCEEEEEEECSSEEEEEEECTTSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT-----TTCCGGGEEEE
T ss_pred ccEEEEEEeCccceEEEEEcCCCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHh-----cCCCcccEEEE
Confidence 3589999999999999999888885555555431 1111 0134566666666655432 23455678888
Q ss_pred EEehhHhhhHhhhc
Q 001049 80 RMGTTVATNALLER 93 (1173)
Q Consensus 80 ~hGTT~atNAller 93 (1173)
-+++...+=.++.+
T Consensus 80 gis~~~~~~v~~D~ 93 (501)
T 3g25_A 80 GITNQRETTVVWDK 93 (501)
T ss_dssp EEEECSSCEEEEET
T ss_pred EEECCcCcEEEEEC
Confidence 77765333333333
No 98
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=24.20 E-value=88 Score=37.07 Aligned_cols=71 Identities=15% Similarity=0.051 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 453 TVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 453 ~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
+..+.+.++++=..-++...++.+. +.|..++. |.+-||+. ++..-.+|+.+|++ |.+|+... .+|+|+++
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~~l~-~~g~~~~~--i~~~GGga~s~~~~Qi~ADv~g~p-V~~~~~~e-~~alGaA~ 443 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVAVLD-DIGHAPQR--FFASDGGTRSRVWMGIMADVLQRP-VQLLANPL-GSAVGAAW 443 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHH-HHTCCCCE--EEEESGGGGCHHHHHHHHHHHTSC-EEEEECCS-THHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCE--EEEeCCcccCHHHHHHHHHHhCCe-EEecCCCC-chHHHHHH
Confidence 5566666666655555566665554 45877664 55556653 33344689999998 77777544 67788765
No 99
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=23.75 E-value=1e+02 Score=32.67 Aligned_cols=33 Identities=6% Similarity=-0.110 Sum_probs=25.1
Q ss_pred CceEEEEeccCccccEEEEecCCceEEEEEecc
Q 001049 7 EKLRFCIDRGGTFTDVYAEIPGQLEGQVLKLLS 39 (1173)
Q Consensus 7 ~~~rigIDvGGTfTD~v~~~~~g~~~~~~K~~s 39 (1173)
.++.+|||+|.|.|-+++++.+++.+...+.++
T Consensus 27 ~~~~~gIDiGS~s~k~vi~~~~~~~l~~~~~~~ 59 (272)
T 3h1q_A 27 PPYKVGVDLGTADIVLVVTDQEGIPVAGALKWA 59 (272)
T ss_dssp SCCEEEEECCSSEEEEEEECTTCCEEEEEEEEC
T ss_pred CCEEEEEEcccceEEEEEECCCCcEEEEEeecc
Confidence 358899999999999999876566455555554
No 100
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=23.60 E-value=19 Score=38.72 Aligned_cols=97 Identities=16% Similarity=0.131 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHCCCcEEEEEccC-cC-CCchhHHHHHHHHHhc-CCceeeeeccccCcCCcccchhHHHHHhcchHHHH
Q 001049 174 KTLEPLLKGLLEKGISCLAVVLMH-SY-TFPQHEMAVEKLALGL-GFRHVSLSSALTPMVRAVPRGLTASVDAYLTPVIK 250 (1173)
Q Consensus 174 ~~v~~~~~~l~~~gv~avAV~~l~-S~-~np~hE~rv~ei~~~~-~~~~Vs~S~ei~p~~~e~eR~~TtvlNAyl~p~~~ 250 (1173)
+.+.++++.|.+.|++.|+++.-. || .=++.++++.+.+++. +.+.++.+-.+.+.++...-..-.++-.|...+..
T Consensus 53 ~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~~~~~A~~~al~~~g~~rvglltpy~~~~~~ 132 (240)
T 3ixl_A 53 ESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTTMSTAVLNGLRALGVRRVALATAYIDDVNE 132 (240)
T ss_dssp GGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEEHHHHHHHHHHHTTCSEEEEEESSCHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEECHHHHHHHHHHHhCCCEEEEEeCChHHHHH
Confidence 456777899999999999996533 33 5577778888888875 66334434444433333211122344445555555
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEcCC
Q 001049 251 EYLSGFMSKFDEGLAKVNVLFMQSDG 276 (1173)
Q Consensus 251 ~yl~~l~~~L~~~~~~~~l~im~s~G 276 (1173)
.|-+.| ++.++ .+....+.|
T Consensus 133 ~~~~~l----~~~Gi--ev~~~~~~~ 152 (240)
T 3ixl_A 133 RLAAFL----AEESL--VPTGCRSLG 152 (240)
T ss_dssp HHHHHH----HHTTC--EEEEEEECC
T ss_pred HHHHHH----HHCCC--EEeccccCC
Confidence 554444 44454 455555544
No 101
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=23.01 E-value=1.4e+02 Score=35.89 Aligned_cols=87 Identities=16% Similarity=0.009 Sum_probs=50.4
Q ss_pred CCCCceEEEEeccCccccEEEEec-CCceEEEEEeccC-------CCC-------C-C---CChHHHHHHHHHHHhhCCC
Q 001049 4 VKEEKLRFCIDRGGTFTDVYAEIP-GQLEGQVLKLLSV-------DPT-------N-Y---DDAPVEGIRRILEEYTGEK 64 (1173)
Q Consensus 4 ~~~~~~rigIDvGGTfTD~v~~~~-~g~~~~~~K~~st-------~p~-------~-~---~~~~~~gi~~~l~~~~~~~ 64 (1173)
|+.++|.||||+|+|.+-++++|. +|+++...+.+.. .|+ . . ++.+++.+..++++++.+
T Consensus 1 m~~~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~- 79 (572)
T 3jvp_A 1 MSLTKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKE- 79 (572)
T ss_dssp ----CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC-
T ss_pred CCCCCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHH-
Confidence 344569999999999999999997 8885555554321 121 0 0 113456666666555432
Q ss_pred CCCCCCCCCCCeeEEEEehhHhhhHhhhcCC
Q 001049 65 IPRTSKIPTDKIEWIRMGTTVATNALLERKG 95 (1173)
Q Consensus 65 ~~~~~~~~~~~v~~i~hGTT~atNAllerkg 95 (1173)
.++++++|..|-++++..+=.++.++|
T Consensus 80 ----~~~~~~~I~~Igis~q~~~~v~~D~~G 106 (572)
T 3jvp_A 80 ----SGVDADDVIGIGVDFTACTMLPVDEEG 106 (572)
T ss_dssp -------CCSCEEEEEEEECSSCEEEECTTS
T ss_pred ----cCCChhHEEEEEEecCCCcEEEECCCC
Confidence 234567888888887644433444444
No 102
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=22.55 E-value=54 Score=39.00 Aligned_cols=23 Identities=30% Similarity=0.176 Sum_probs=19.1
Q ss_pred CCCceEEEEeccCccccEEEEec
Q 001049 5 KEEKLRFCIDRGGTFTDVYAEIP 27 (1173)
Q Consensus 5 ~~~~~rigIDvGGTfTD~v~~~~ 27 (1173)
++....++||+|||+.=+.+++-
T Consensus 77 ~E~G~~LalDlGGTn~Rv~~V~l 99 (485)
T 3o8m_A 77 KETGDFLALDLGGTNLRVVLVKL 99 (485)
T ss_dssp CCEEEEEEEEESSSEEEEEEEEE
T ss_pred CcceEEEEEEecCCeEEEEEEEE
Confidence 34567899999999999999863
No 103
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=22.29 E-value=81 Score=38.07 Aligned_cols=30 Identities=27% Similarity=0.201 Sum_probs=22.9
Q ss_pred CCEEEEecCCCceEEeeee-ceeeeeeeeEE
Q 001049 312 KPLIGFDMGGTSTDVSRYA-GSYEQVLETQI 341 (1173)
Q Consensus 312 ~~~I~~DmGGTStDv~li~-G~~~~~~~~~i 341 (1173)
.-+.++||||=|||+|++. |....+...-+
T Consensus 407 LGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~ 437 (610)
T 2d0o_A 407 RPLAILDLGAGSTDASIINPKGDIIATHLAG 437 (610)
T ss_dssp SSEEEEEECSSEEEEEEECTTCCEEEEEEEC
T ss_pred CCeEEEEeCCCcceEEEEcCCcEEEEEEecc
Confidence 3489999999999999996 77655544333
No 104
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=21.94 E-value=1.2e+02 Score=33.50 Aligned_cols=50 Identities=16% Similarity=0.177 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchhhhHHHHHHHcCCC
Q 001049 461 FVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMR 510 (1173)
Q Consensus 461 i~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGplha~~lA~~lGi~ 510 (1173)
+.+.+...+.++|++...+.|++|.|+..+.+-+++...--.+++.||++
T Consensus 218 v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~~d~~~~~lg~~ 267 (331)
T 2x3e_A 218 VFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRILAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHHHHHcCCC
Confidence 44556677888899999999999999999999999988888899999976
No 105
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=21.87 E-value=83 Score=38.06 Aligned_cols=30 Identities=23% Similarity=0.221 Sum_probs=22.8
Q ss_pred CCEEEEecCCCceEEeeee-ceeeeeeeeEE
Q 001049 312 KPLIGFDMGGTSTDVSRYA-GSYEQVLETQI 341 (1173)
Q Consensus 312 ~~~I~~DmGGTStDv~li~-G~~~~~~~~~i 341 (1173)
.-+.++||||=|||+|++. |....+...-+
T Consensus 409 lGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~ 439 (607)
T 1nbw_A 409 APLAILDLGAGSTDAAIVNAEGQITAVHLAG 439 (607)
T ss_dssp SSEEEEEECSSEEEEEEECSSSCEEEEEEEC
T ss_pred CCeEEEEeCCCcceEEEEcCCcEEEEEEecc
Confidence 3489999999999999996 76655544333
No 106
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=21.77 E-value=32 Score=37.47 Aligned_cols=20 Identities=30% Similarity=0.313 Sum_probs=15.6
Q ss_pred EEEEecCCCceEEeeee-cee
Q 001049 314 LIGFDMGGTSTDVSRYA-GSY 333 (1173)
Q Consensus 314 ~I~~DmGGTStDv~li~-G~~ 333 (1173)
+|.+|+|||++++++++ |+.
T Consensus 2 ~lgiDiGGT~i~~~l~d~g~i 22 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVLNGAV 22 (291)
T ss_dssp --CEECCTTCEEEEEECSSSE
T ss_pred EEEEEeccccEEEEEEcCCeE
Confidence 57899999999999996 544
No 107
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=21.69 E-value=1.1e+02 Score=36.41 Aligned_cols=71 Identities=20% Similarity=0.141 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCch--hhhHHHHHHHcCCCEEEECCCCCccchhcccc
Q 001049 453 TVEDIALGFVNVANETMCRPIRQLTEMKGHETRNHALACFGGAG--PQHACAIARSLGMREVLIHRFCGILSAYGMGL 528 (1173)
Q Consensus 453 ~~eeaA~gi~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaG--plha~~lA~~lGi~~VivP~~~~v~sA~G~~~ 528 (1173)
+.++.+.++++=..-++...++.+. +.|..++ .|++-||+. ++..-.+|+.+|++ |.+|.... .+|+|+++
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~~l~-~~g~~~~--~i~~~GGgaks~~~~Qi~ADvlg~p-V~~~~~~e-~~alGAA~ 467 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLELIR-SLGASIT--RILLIGGGAKSEAIRTLAPSILGMD-VTRPATDE-YVAIGAAR 467 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH-HTTCCCC--EEEEESGGGGCHHHHHHHHHHHTSC-EEEECCCC-HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCC--EEEEECchhcCHHHHHHHHHHhCCc-eEecCCcc-cHHHHHHH
Confidence 4555555555554455555555443 3677765 355566643 33334689999998 77776543 66888764
No 108
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=21.63 E-value=95 Score=34.41 Aligned_cols=53 Identities=19% Similarity=0.218 Sum_probs=37.1
Q ss_pred CCHHHHHHHHHHHHHCCCcEEEEEcc---CcCCCchhHHHHHHHHHhc--CCceeeee
Q 001049 171 VNEKTLEPLLKGLLEKGISCLAVVLM---HSYTFPQHEMAVEKLALGL--GFRHVSLS 223 (1173)
Q Consensus 171 lde~~v~~~~~~l~~~gv~avAV~~l---~S~~np~hE~rv~ei~~~~--~~~~Vs~S 223 (1173)
+|++.+++.++.+.+.|++.+.||.- +...+.+.=+++-+.+.+. +-+||..+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaG 87 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVG 87 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEc
Confidence 68899999999999999999999974 5566664333444554443 43355543
No 109
>4glq_A Methyl-accepting chemotaxis protein; chromophore, phytochrome, cyanobacteriochrome, phycoviolobil bilin, BILI-protein; HET: PVN; 1.77A {Thermosynechococcus elongatus} PDB: 4fof_A*
Probab=21.32 E-value=41 Score=33.76 Aligned_cols=94 Identities=16% Similarity=0.273 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHhcccccccccccccceecCCC--CCeeccc--CCCceeecc-chH-HHHHHHHHhcCCCCCCcEE
Q 001049 745 RFMGIAEQMGRTLQRTSISTNIKERLDFSCALFGPD--GGLVANA--PHVPVHLGA-MSS-TVRWQLKYWRHNLNEGDVL 818 (1173)
Q Consensus 745 ~L~siaeEM~~~l~RtA~Spii~e~~Dfs~aI~d~~--G~lva~~--~~ip~h~gs-m~~-~v~~~l~~~~~~l~pGDv~ 818 (1173)
-|..+++|....|. ..+ +..-.||++ |+.++.+ ++.|-.+|. .+. .+. +.|...++.|-++
T Consensus 15 il~~~v~~v~~~l~-~DR---------v~Iy~f~~d~~g~vvaE~~~~~~~s~lg~~~~~~~~~---~~~~~~~~~g~~~ 81 (171)
T 4glq_A 15 IFETLVAKGRELLA-CDR---------VIVYAFDDNYVGTVVAESVAEGWPQARDQVIEDPCFR---EHWVEAYRQGRIQ 81 (171)
T ss_dssp HHHHHHHHHHHHHT-CSE---------EEEEEECTTCCEEEEEEEECTTSCCCTTCEECCTHHH---HHTHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHC-CCe---------EEEEEEeCCCCeEEEEEEcCCCCccccCCccCccccH---HHHHHHHHcCCEE
Confidence 45666777777654 112 122335555 5677654 566655553 111 111 1122234678889
Q ss_pred EecCCCCCCC---CC-----CC--eEEEEeeeeCCeEEEEEec
Q 001049 819 VSNHPCAGGS---HL-----PD--ITVITPVFDNGKLVFFVAS 851 (1173)
Q Consensus 819 i~NDPy~Gg~---Hl-----~D--v~v~~PVF~~Gelv~~~a~ 851 (1173)
+.+|-+.-.. |. .. =.++.||+++|++.|+.++
T Consensus 82 ~I~Dv~~~~~~~~~~~~l~~~~v~S~L~vPi~~~~~l~GlL~~ 124 (171)
T 4glq_A 82 ATTDIFKAGLTECHLNQLRPLKVRANLVVPMVIDDQLFGLLIA 124 (171)
T ss_dssp EESCGGGTTCCHHHHHHHGGGTEEEEEEEEEEETTEEEEEEEE
T ss_pred EEcCcCcCCCCHHHHHHHHhcCCcEEEEEEEEECCEEEEEEEE
Confidence 9999774221 11 01 2678999999999988765
No 110
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=20.39 E-value=1.5e+02 Score=35.88 Aligned_cols=68 Identities=19% Similarity=0.101 Sum_probs=39.2
Q ss_pred ceEEEEeccCccccEEEEe--cCCce--EEEEEeccCCCCCCCChHHHHHHHHHHHhhCCCCCCCCCCCCCCeeEEEE
Q 001049 8 KLRFCIDRGGTFTDVYAEI--PGQLE--GQVLKLLSVDPTNYDDAPVEGIRRILEEYTGEKIPRTSKIPTDKIEWIRM 81 (1173)
Q Consensus 8 ~~rigIDvGGTfTD~v~~~--~~g~~--~~~~K~~st~p~~~~~~~~~gi~~~l~~~~~~~~~~~~~~~~~~v~~i~h 81 (1173)
++..|||+|-.-|.+.+-+ ++|++ +...-++|| =-.-+..-+.|+.++|.+++++ .+.+.++++.|++
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~tt-g~kgt~~n~~g~~~~l~~~~~~-----~~~~~~~~~lir~ 73 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITHSALAETT-GIKGTLRNVFGIQEALALVARG-----AGIAVSDISLIRI 73 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECC-SSTTSTTHHHHHHHHHHHHHHH-----HTCCGGGEEEEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEeeccccccC-CccCcHHHHHHHHHHHHHHHHH-----cCCChhhceeeee
Confidence 5889999999999977643 33542 222234443 2222233355666666655432 2456778877654
No 111
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=20.27 E-value=76 Score=35.36 Aligned_cols=24 Identities=25% Similarity=0.119 Sum_probs=20.2
Q ss_pred CCCEEEEecCCCceEEeeee-ceee
Q 001049 311 EKPLIGFDMGGTSTDVSRYA-GSYE 334 (1173)
Q Consensus 311 ~~~~I~~DmGGTStDv~li~-G~~~ 334 (1173)
.++.+++||||-||.+++.+ +++.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~~~~~~ 161 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGKGYKVR 161 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEEEeCCcee
Confidence 45799999999999999986 6653
No 112
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=20.24 E-value=1.3e+02 Score=33.38 Aligned_cols=50 Identities=14% Similarity=0.075 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCceEEEEcCchhhhHHHHHHHcCCC
Q 001049 461 FVNVANETMCRPIRQLTEMKGHETRNHALACFGGAGPQHACAIARSLGMR 510 (1173)
Q Consensus 461 i~~ia~~~Ma~air~~~~~rG~dprdf~LvafGGaGplha~~lA~~lGi~ 510 (1173)
+.+.+...|.++|++...+.|++|.|+..+.+-++|...--.+++.||++
T Consensus 225 v~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~d~i~~~lg~~ 274 (339)
T 1mzj_A 225 VFRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRIIDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHHHHhCCC
Confidence 34445667888899999999999999999999999887777899999975
No 113
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=20.22 E-value=95 Score=33.87 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=68.0
Q ss_pred CceeEEecCCCHHHHHHHHHHHHHCCCcEEEEEccCcCCCchhHHHHHHHHHhc-CCceeeeeccccCcCCcccchhHHH
Q 001049 162 GELVRVVKPVNEKTLEPLLKGLLEKGISCLAVVLMHSYTFPQHEMAVEKLALGL-GFRHVSLSSALTPMVRAVPRGLTAS 240 (1173)
Q Consensus 162 g~~g~v~~plde~~v~~~~~~l~~~gv~avAV~~l~S~~np~hE~rv~ei~~~~-~~~~Vs~S~ei~p~~~e~eR~~Ttv 240 (1173)
|.+|-++-.|..++..+..+.+++.|++.|-++ +..-| +.|++++++.. +++++....-+... |
T Consensus 123 Gvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~li---aP~t~--~eri~~i~~~~~gfvY~vS~~GvTG~-----~----- 187 (267)
T 3vnd_A 123 GVDSVLIADVPVEESAPFSKAAKAHGIAPIFIA---PPNAD--ADTLKMVSEQGEGYTYLLSRAGVTGT-----E----- 187 (267)
T ss_dssp TCCEEEETTSCGGGCHHHHHHHHHTTCEEECEE---CTTCC--HHHHHHHHHHCCSCEEESCCCCCC-------------
T ss_pred CCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEE---CCCCC--HHHHHHHHHhCCCcEEEEecCCCCCC-----c-----
Confidence 344466766777888899999999999876444 33323 56899998886 66554323333321 1
Q ss_pred HHhcchHHHHHHHHHHHHHHHhcCCCceEEEEEcCCCccccccccccceecccchhhHHHHHHh
Q 001049 241 VDAYLTPVIKEYLSGFMSKFDEGLAKVNVLFMQSDGGLAPESRFSGHKAVLSGPAGGVVGYSQT 304 (1173)
Q Consensus 241 lNAyl~p~~~~yl~~l~~~L~~~~~~~~l~im~s~GG~~s~~~~~pv~ti~SGPa~Gv~Ga~~l 304 (1173)
.-+.+-+..+++++++. .+.|+.+ +||+-+.++++ ..+..|--+-++|++.+
T Consensus 188 --~~~~~~~~~~v~~vr~~-----~~~pv~v---GfGI~~~e~~~--~~~~~gADgvVVGSaiv 239 (267)
T 3vnd_A 188 --SKAGEPIENILTQLAEF-----NAPPPLL---GFGIAEPEQVR--AAIKAGAAGAISGSAVV 239 (267)
T ss_dssp -------CHHHHHHHHHTT-----TCCCEEE---CSSCCSHHHHH--HHHHTTCSEEEECHHHH
T ss_pred --cCCcHHHHHHHHHHHHh-----cCCCEEE---ECCcCCHHHHH--HHHHcCCCEEEECHHHH
Confidence 11123355666666443 2457776 88888887753 13445555556666554
No 114
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=20.18 E-value=98 Score=34.40 Aligned_cols=23 Identities=17% Similarity=0.200 Sum_probs=19.8
Q ss_pred CCEEEEecCCCceEEeeee-ceee
Q 001049 312 KPLIGFDMGGTSTDVSRYA-GSYE 334 (1173)
Q Consensus 312 ~~~I~~DmGGTStDv~li~-G~~~ 334 (1173)
.+.+++|+||=||.+++.+ +++.
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~ 154 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEIL 154 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEE
T ss_pred CCEEEEEeCCCceEEEEEECCeEe
Confidence 5799999999999999996 6653
Done!