Query 001052
Match_columns 1172
No_of_seqs 455 out of 3323
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 08:33:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001052.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001052hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zyv_A AOH1; oxidoreductase, m 100.0 1E-243 4E-248 2367.0 101.8 1119 17-1170 6-1138(1335)
2 3unc_A Xanthine dehydrogenase/ 100.0 9E-241 3E-245 2323.5 108.1 1117 19-1170 4-1133(1332)
3 1vlb_A Aldehyde oxidoreductase 100.0 1E-151 4E-156 1444.5 74.5 709 19-1158 2-736 (907)
4 1dgj_A Aldehyde oxidoreductase 100.0 1E-151 5E-156 1444.2 73.0 707 19-1155 2-735 (907)
5 3nvz_C Xanthine dehydrogenase/ 100.0 3E-121 1E-125 1145.5 60.4 562 605-1170 1-563 (755)
6 2w3s_B Xanthine dehydrogenase; 100.0 8E-118 3E-122 1119.4 63.0 559 606-1168 2-600 (777)
7 1rm6_A 4-hydroxybenzoyl-COA re 100.0 5E-115 2E-119 1094.4 62.0 544 602-1159 6-586 (769)
8 1t3q_B Quinoline 2-oxidoreduct 100.0 2E-113 6E-118 1082.9 54.4 544 606-1159 13-610 (788)
9 1ffv_B CUTL, molybdoprotein of 100.0 1E-113 4E-118 1085.0 50.9 551 604-1159 15-627 (803)
10 1n62_B Carbon monoxide dehydro 100.0 2E-113 8E-118 1084.3 48.8 551 605-1159 19-633 (809)
11 2w3s_A Xanthine dehydrogenase; 100.0 2E-103 5E-108 932.8 37.8 450 19-564 1-452 (462)
12 3hrd_A Nicotinate dehydrogenas 100.0 7.2E-96 2E-100 863.6 44.2 406 602-1013 3-415 (425)
13 3nvz_B Xanthine dehydrogenase/ 100.0 3E-62 1E-66 554.1 26.5 301 261-566 2-304 (305)
14 3hrd_C Nicotinate dehydrogenas 100.0 1E-60 3.4E-65 539.0 24.4 284 270-567 3-291 (296)
15 1t3q_C Quinoline 2-oxidoreduct 100.0 2.2E-58 7.4E-63 518.0 25.5 280 269-566 4-283 (288)
16 3nvw_A Xanthine dehydrogenase/ 100.0 2.8E-58 9.5E-63 465.1 16.0 160 19-179 3-163 (164)
17 1n62_C Carbon monoxide dehydro 100.0 3.7E-57 1.3E-61 508.8 24.9 281 270-566 5-286 (288)
18 1rm6_B 4-hydroxybenzoyl-COA re 100.0 1.8E-56 6E-61 507.1 24.5 276 270-564 6-322 (324)
19 1ffv_C CUTM, flavoprotein of c 100.0 2.8E-54 9.5E-59 485.1 24.9 280 270-565 5-285 (287)
20 3hrd_D Nicotinate dehydrogenas 100.0 1.5E-53 5.2E-58 431.3 17.8 150 19-181 4-154 (160)
21 1ffv_A CUTS, iron-sulfur prote 100.0 1.2E-50 4.1E-55 412.9 18.0 150 19-181 4-154 (163)
22 1n62_A Carbon monoxide dehydro 100.0 2.1E-50 7.3E-55 412.3 18.0 151 19-181 4-155 (166)
23 1rm6_C 4-hydroxybenzoyl-COA re 100.0 9.8E-46 3.4E-50 378.1 17.4 149 19-180 3-152 (161)
24 1t3q_A Quinoline 2-oxidoreduct 100.0 2.1E-41 7E-46 349.8 17.4 152 17-181 8-160 (168)
25 3hrd_B Nicotinate dehydrogenas 99.8 9.5E-21 3.3E-25 216.0 17.5 138 1032-1170 2-162 (330)
26 3c8y_A Iron hydrogenase 1; dit 98.8 5E-09 1.7E-13 128.4 6.5 108 21-144 2-115 (574)
27 3vr8_B Iron-sulfur subunit of 98.7 9.1E-09 3.1E-13 114.0 5.8 67 29-107 56-128 (282)
28 2wdq_B Succinate dehydrogenase 98.6 4.7E-08 1.6E-12 106.6 7.4 67 28-106 21-95 (238)
29 2h88_B Succinate dehydrogenase 98.6 4.7E-08 1.6E-12 107.6 7.2 68 28-107 31-104 (252)
30 2bs2_B Quinol-fumarate reducta 98.4 3E-07 1E-11 100.4 7.6 68 28-107 24-96 (241)
31 1kf6_B Fumarate reductase iron 98.2 6.1E-07 2.1E-11 98.1 4.8 66 28-106 24-94 (243)
32 1l5p_A Ferredoxin; [2Fe-2S] cl 98.2 3.6E-06 1.2E-10 77.9 8.9 51 20-71 2-53 (93)
33 1uxy_A MURB, uridine diphospho 98.0 1.2E-05 4.1E-10 91.9 9.9 162 263-450 9-180 (340)
34 1hsk_A UDP-N-acetylenolpyruvoy 98.0 8.9E-06 3.1E-10 92.7 8.7 152 271-450 50-208 (326)
35 2wlb_A ETP1-FD, electron trans 97.7 4E-05 1.4E-09 72.1 5.6 52 18-71 3-56 (103)
36 1iue_A Ferredoxin; electron tr 97.6 5.6E-05 1.9E-09 70.5 6.2 51 19-71 3-54 (98)
37 1a70_A Ferredoxin; iron-sulfur 97.6 7.3E-05 2.5E-09 69.6 6.1 50 20-71 4-54 (97)
38 1frr_A Ferredoxin I; electron 97.6 9.3E-05 3.2E-09 68.5 6.5 77 19-100 2-87 (95)
39 1awd_A Ferredoxin; electron tr 97.5 0.00014 4.7E-09 67.3 7.2 50 20-71 2-52 (94)
40 1jq4_A Methane monooxygenase c 97.5 4.8E-05 1.6E-09 71.0 3.7 50 20-71 4-57 (98)
41 1wri_A Ferredoxin II, ferredox 97.5 0.00011 3.9E-09 67.7 6.1 48 19-69 2-49 (93)
42 1frd_A Heterocyst [2Fe-2S] fer 97.4 0.00016 5.5E-09 67.3 6.3 50 19-70 3-54 (98)
43 3lxf_A Ferredoxin; iron, iron- 97.2 0.00037 1.3E-08 65.7 6.0 80 20-100 2-99 (104)
44 1czp_A Ferredoxin I; [2Fe-2S] 97.2 0.00038 1.3E-08 64.8 5.4 48 20-69 4-53 (98)
45 3hui_A Ferredoxin; cytochrome 97.1 0.00035 1.2E-08 68.1 5.3 82 18-100 21-120 (126)
46 1xlq_A Putidaredoxin, PDX; [2F 97.1 0.00043 1.5E-08 65.4 5.3 51 20-71 2-54 (106)
47 1i7h_A Ferredoxin; 2Fe-2S,elec 97.1 0.00051 1.8E-08 65.5 5.9 50 19-70 2-56 (111)
48 1uwm_A Ferredoxin VI, FDVI; el 97.1 0.00051 1.7E-08 64.9 5.3 51 20-71 2-54 (106)
49 3tx1_A UDP-N-acetylenolpyruvoy 96.9 0.0022 7.5E-08 72.7 9.1 151 270-448 55-212 (322)
50 3i99_A UDP-N-acetylenolpyruvoy 96.7 0.005 1.7E-07 70.5 10.9 154 262-449 24-195 (357)
51 1b9r_A Protein (terpredoxin); 96.7 0.0006 2.1E-08 64.3 2.4 51 20-71 2-54 (105)
52 2gqt_A UDP-N-acetylenolpyruvyl 96.5 0.002 6.7E-08 71.1 5.7 151 263-449 17-170 (268)
53 4feh_A Oxidoreductase DPRE1; a 96.2 0.024 8.4E-07 67.7 13.0 157 271-449 44-212 (481)
54 2bt6_A Adrenodoxin 1; rutheniu 96.2 0.0036 1.2E-07 59.3 4.3 50 19-70 7-60 (108)
55 2y5c_A Adrenodoxin-like protei 96.1 0.0047 1.6E-07 58.5 5.0 52 18-71 5-58 (109)
56 3i9v_3 NADH-quinone oxidoreduc 96.0 0.0045 1.5E-07 78.6 5.5 105 21-133 2-125 (783)
57 1doi_A 2Fe-2S ferredoxin; halo 96.0 0.0033 1.1E-07 61.5 3.2 48 19-69 28-75 (128)
58 2vfr_A Xylitol oxidase, aldito 95.8 0.0081 2.8E-07 70.7 6.0 102 271-392 22-123 (422)
59 3ah7_A [2Fe-2S]ferredoxin; [2F 95.4 0.017 5.7E-07 55.0 5.8 41 26-70 15-56 (113)
60 1e8g_A Vanillyl-alcohol oxidas 95.1 0.092 3.2E-06 64.0 12.3 108 270-393 71-184 (560)
61 2exr_A Cytokinin dehydrogenase 95.1 0.085 2.9E-06 63.8 11.8 102 270-393 62-176 (524)
62 4bby_A Alkyldihydroxyacetoneph 95.0 0.022 7.5E-07 70.9 6.6 106 271-393 207-318 (658)
63 1krh_A Benzoate 1,2-dioxygenas 95.0 0.018 6.3E-07 65.4 5.4 48 21-70 4-54 (338)
64 1w1o_A Cytokinin dehydrogenase 94.3 0.19 6.6E-06 60.8 12.4 151 270-449 69-243 (534)
65 3hrd_B Nicotinate dehydrogenas 94.1 0.57 1.9E-05 53.0 14.9 191 782-974 21-309 (330)
66 3pm9_A Putative oxidoreductase 93.9 0.081 2.8E-06 63.1 7.7 103 271-393 53-160 (476)
67 3n9z_C Adrenodoxin; cytochrome 93.8 0.013 4.4E-07 56.8 0.4 50 19-70 6-59 (123)
68 3rja_A Carbohydrate oxidase; p 93.8 0.25 8.5E-06 58.9 11.6 152 269-448 36-204 (473)
69 2pia_A Phthalate dioxygenase r 93.8 0.04 1.4E-06 62.2 4.5 49 20-70 237-285 (321)
70 2uuu_A Alkyldihydroxyacetoneph 93.4 0.092 3.2E-06 64.2 7.3 107 271-394 139-250 (584)
71 1y56_A Hypothetical protein PH 93.4 0.091 3.1E-06 62.9 7.1 74 14-102 9-88 (493)
72 1rm6_A 4-hydroxybenzoyl-COA re 93.1 1.4 4.7E-05 55.7 17.3 191 782-974 457-746 (769)
73 1f0x_A DLDH, D-lactate dehydro 93.1 0.091 3.1E-06 64.0 6.3 107 270-393 46-159 (571)
74 1t3q_B Quinoline 2-oxidoreduct 92.8 2.9 0.0001 52.8 19.8 189 784-974 484-766 (788)
75 3js8_A Cholesterol oxidase; ch 92.5 0.27 9.2E-06 59.2 9.2 103 271-392 31-142 (540)
76 1dgj_A Aldehyde oxidoreductase 92.5 1.7 5.8E-05 55.8 17.2 188 782-974 631-889 (907)
77 3fw9_A Reticuline oxidase; BI- 92.4 0.38 1.3E-05 57.6 10.5 161 270-449 46-214 (495)
78 1wvf_A 4-cresol dehydrogenase 92.0 0.17 6E-06 61.0 6.9 82 270-351 57-142 (520)
79 2i0k_A Oxidoreductase; MIX alp 91.7 0.22 7.6E-06 60.6 7.4 103 271-392 37-148 (561)
80 3vte_A Tetrahydrocannabinolic 91.6 0.38 1.3E-05 57.8 9.1 153 270-448 54-221 (518)
81 1n62_B Carbon monoxide dehydro 90.8 11 0.00039 47.6 22.0 188 785-974 507-786 (809)
82 3zyy_X Iron-sulfur cluster bin 90.7 0.21 7.1E-06 61.0 5.6 49 18-70 3-52 (631)
83 1ffv_B CUTL, molybdoprotein of 90.3 8.8 0.0003 48.6 20.2 189 784-974 500-780 (803)
84 2ipi_A Aclacinomycin oxidoredu 90.0 1.4 4.9E-05 53.0 12.2 76 270-350 56-137 (521)
85 3zyv_A AOH1; oxidoreductase, m 89.9 4.6 0.00016 54.0 17.9 59 782-841 1019-1088(1335)
86 2wdx_A Putative hexose oxidase 89.2 1.8 6.2E-05 52.1 12.3 157 270-448 58-231 (523)
87 1vlb_A Aldehyde oxidoreductase 88.7 4.6 0.00016 51.8 16.0 189 782-974 629-889 (907)
88 1zr6_A Glucooligosaccharide ox 88.1 3.9 0.00013 49.0 14.0 77 270-349 43-123 (503)
89 3pop_A GILR oxidase; FAD bindi 87.0 3.9 0.00013 48.9 13.2 77 270-349 35-115 (501)
90 2gag_A Heterotetrameric sarcos 85.1 1.9 6.3E-05 56.0 9.7 84 16-106 18-111 (965)
91 2y3s_A TAML; oxidoreductase; H 84.4 4.6 0.00016 48.6 12.1 157 270-448 59-232 (530)
92 2bvf_A 6-hydroxy-D-nicotine ox 83.8 1.8 6.3E-05 51.1 8.2 77 270-350 39-119 (459)
93 3hrd_A Nicotinate dehydrogenas 78.3 3.5 0.00012 48.2 7.8 59 1052-1121 186-244 (425)
94 3nvz_C Xanthine dehydrogenase/ 71.6 3.9 0.00013 51.4 6.2 60 782-842 444-514 (755)
95 2w3s_B Xanthine dehydrogenase; 66.0 7.9 0.00027 48.8 7.3 59 783-842 465-534 (777)
96 1tyg_B YJBS; alpha beta barrel 64.7 14 0.00047 33.2 6.6 41 18-71 18-59 (87)
97 3tsh_A Pollen allergen PHL P 4 60.8 9.8 0.00033 45.3 6.5 80 270-350 53-137 (500)
98 2nlv_A XISI protein-like; XISI 53.7 15 0.0005 34.6 4.9 39 1056-1104 57-99 (112)
99 3d7q_A XISI protein-like; stru 53.4 15 0.0005 34.6 4.9 38 1056-1103 57-98 (112)
100 2kl0_A Putative thiamin biosyn 53.2 37 0.0013 29.2 7.2 61 22-106 2-63 (73)
101 2nwv_A XISI protein-like; YP_3 52.4 16 0.00053 34.5 4.9 38 1056-1103 59-100 (114)
102 2l32_A Small archaeal modifier 51.6 8.5 0.00029 33.4 2.8 43 19-71 1-43 (74)
103 3unc_A Xanthine dehydrogenase/ 49.2 34 0.0012 45.6 9.3 59 1052-1121 744-803 (1332)
104 2k5p_A THis protein, thiamine- 41.8 16 0.00054 32.1 3.0 40 22-71 2-41 (78)
105 1f0z_A THis protein; ubiquitin 38.4 19 0.00066 30.1 3.0 37 22-71 2-38 (66)
106 2nvm_A FDXN element excision c 34.2 39 0.0013 32.2 4.5 38 1056-1103 71-112 (126)
107 2yvs_A Glycolate oxidase subun 29.1 1.2E+02 0.0043 31.6 8.0 24 327-350 3-26 (219)
108 1ep3_B Dihydroorotate dehydrog 28.5 19 0.00066 38.6 1.6 17 54-70 223-239 (262)
109 2dl6_A Chromodomain-helicase-D 27.4 25 0.00086 31.2 1.8 49 2-51 4-53 (83)
110 1erd_A Pheromone ER-2; NMR {Eu 23.7 40 0.0014 24.3 1.9 28 115-142 5-32 (40)
111 3abf_A 4-oxalocrotonate tautom 23.7 36 0.0012 27.7 2.1 31 810-840 24-57 (64)
112 1v86_A DNA segment, CHR 7, way 23.4 81 0.0028 28.2 4.6 36 16-52 15-51 (95)
113 3vot_A L-amino acid ligase, BL 22.1 1.9E+02 0.0064 33.0 8.6 69 646-726 344-417 (425)
114 3kwl_A Uncharacterized protein 21.3 2E+02 0.0067 34.2 8.6 117 28-167 43-196 (514)
115 1n91_A ORF, hypothetical prote 20.3 1.5E+02 0.005 27.7 5.6 46 1063-1108 34-79 (108)
No 1
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=100.00 E-value=1e-243 Score=2367.00 Aligned_cols=1119 Identities=39% Similarity=0.692 Sum_probs=1005.5
Q ss_pred cceEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccC
Q 001052 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE 95 (1172)
Q Consensus 17 ~~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 95 (1172)
..+.|+|+|||+++++++++|++|||+|||++ +|||||+||+||+||||||+|.++|+.+++++|++|||||+|++++|
T Consensus 6 ~~~~l~F~vNG~~v~~~~~~p~~tLl~~LR~~~~ltGTK~gC~EG~CGACtV~v~~~~~~~~~~~~~avNsCl~~l~~~~ 85 (1335)
T 3zyv_A 6 ESDELIFFVNGKKVTERNADPEVNLLFYLRKVIRLTGTKYGCGGGDCGACTVMISRYDPISKRISHFSATACLVPICSLH 85 (1335)
T ss_dssp -CCCEEEEETTEEEEESSCCTTCBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCT
T ss_pred CCCeEEEEECCEEEEeCCCCcCccHHHHHhccCCCcccccccCCCCCcceEEEEeeEeCCCCeEEEEEhhHHHHHHHHhc
Confidence 45689999999999999999999999999996 99999999999999999999999999999999999999999999999
Q ss_pred CceEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHH
Q 001052 96 GMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAF 175 (1172)
Q Consensus 96 g~~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~ 175 (1172)
|++|+||||||+.+++||||||+|+++|||||||||||||||||+||++++.| +++||+++|+||||||||||||+||+
T Consensus 86 g~~v~TvEglg~~~~~lHpvQ~~~a~~hgsQCGFCTPGfVMSmyall~~~~~p-t~~~ie~al~GNLCRCTGYRPIldA~ 164 (1335)
T 3zyv_A 86 GAAVTTVEGIGSTKTRIHPVQERIAKGHGTQCGFCTPGMVMSIYTLLRNHPEP-STEQIMETLGGNLCRCTGYRPIVESA 164 (1335)
T ss_dssp TCEEECHHHHCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHCSSC-CHHHHHHHHTTCCCSSSCSHHHHHHH
T ss_pred CCEEEeeCCCCCCCCCCCHHHHHHHhcCCCcCCCCCcHHHHHHHHHHHcCCCC-CHHHHHHHhCCcccccCCCHHHHHHH
Confidence 99999999999777899999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHhccccccccCCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccccCCCCCCCC-CcCCChh
Q 001052 176 RVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPE 254 (1172)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~p~~ 254 (1172)
++|+.+.+ ||..++. +.||.+...+.... . .....+ .++..+|.+|||+ |+||||+
T Consensus 165 ksfa~~~~----------------~~~~~~~-~~~~~~~~~~~~~~-~---~~~~~~--~~~~~~~~~~d~~~e~ifppe 221 (1335)
T 3zyv_A 165 KSFCPSST----------------CCQMNGE-GKCCLDEEKNEPER-K---NSVCTK--LYEKKEFQPLDPTQELIFPPE 221 (1335)
T ss_dssp HTTCC--------------------------------------------------CC--SSCGGGSCCCCGGGSCCCCHH
T ss_pred HHhhccCc----------------cccccCC-CcccccccccCccc-c---cccccc--cccccccCCCCccccccCCHH
Confidence 99986542 3433332 13444433222110 0 000112 5677899999999 9999999
Q ss_pred hhcc----CCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeec
Q 001052 255 LLLR----KSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK 330 (1172)
Q Consensus 255 l~~~----~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~ 330 (1172)
|... ....+.+++ ++.+||+|+||+|+++|+++||+++||+||||++++++++...++++||+++|+||+.|+.+
T Consensus 222 l~~~~~~~~~~~l~~~g-~~~~w~~P~tl~el~~l~~~~p~a~lvaGnT~~gl~~~~~~~~~~~~I~~~~v~EL~~i~~~ 300 (1335)
T 3zyv_A 222 LMRMAEESQNTVLTFRG-ERTTWIAPGTLNDLLELKMKHPSAPLVIGNTYLGLHMKFTDVSYPIIISPARILELFVVTNT 300 (1335)
T ss_dssp HHHHHC--CCCCEEEEC-SSCEEEECSSHHHHHHHHHHCTTSCBCSSCTTHHHHHC--CCCCSEEECCTTCGGGSCEECC
T ss_pred HHhhhhccccceeeecC-CCceEecCCCHHHHHHHHHHCCCCeEEEecccceeeEeecCCCCCeEEEcCcchhHheEEec
Confidence 9742 234677777 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEE
Q 001052 331 DDGLEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFH 410 (1172)
Q Consensus 331 ~~~l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~ 410 (1172)
+++|+|||+|||+++++.|++.+++++.++++.|++|.+++++|||+||||+||||||||++||+||++|+|+|+||+|+
T Consensus 301 ~~~l~IGA~vtls~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~fAs~qIRN~aTigGNI~~asPisD~~p~L~A~~A~l~ 380 (1335)
T 3zyv_A 301 KQGLTLGTGLSLTQVKNVLSDVVSRLPKEKTQIYCALLKQLKTLAGQQIRNVASLGGHIISRLPTSDLNPILGIGNCILN 380 (1335)
T ss_dssp TTEEEEETTCBHHHHHHHHHHHHTTSCTTTCTTHHHHHHHHTTSSCHHHHHHCBHHHHHHTCCTTCSSHHHHGGGTCEEE
T ss_pred CCEEEEcccCcHHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHhcchhhcCcccccCceeccCCcchHHHHHHhhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeEEEehHh-hhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEE
Q 001052 411 IVDCKGNIRTTMAEE-FFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVS 489 (1172)
Q Consensus 411 l~s~~g~~R~vpl~d-F~~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~ 489 (1172)
|.+.+| .|++||+| ||.||++++|+++|||++|+||.+.++.++++||+++|+++|||+||+||++.++++++ +|+
T Consensus 381 l~~~~g-~r~i~l~d~F~~gyrk~~l~~~eil~si~iP~~~~~~~~~~yK~s~R~d~dia~Vnaa~~v~l~~~~~--~v~ 457 (1335)
T 3zyv_A 381 VASTEG-IQQIPLNDHFLAGVPDAILKPEQVLISVFVPRSSKWEFVSAFRQAPRQQNAFATVNAGMKVVFKEDTN--TIT 457 (1335)
T ss_dssp EECSSC-EEEEECCTTTSCC----CCCTTCEEEEEEEECCCTTEEEEEEEECSSSSSSCCSEEEEEEEEC----C--BCS
T ss_pred EecCCc-eEEEechHhhhhcccccccCCCcEEEEeeccCCchhhhhhheeeccccccchhhheeeeeEEEecCCC--eEe
Confidence 999999 99999977 77899999999999999999999988899999999999999999999999999976432 899
Q ss_pred EEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhccC-
Q 001052 490 DALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEG- 568 (1172)
Q Consensus 490 ~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~~~- 568 (1172)
++||+||||+++|+|+.++|++|+||.|++++|++|++.|.+|+.|..+.+++|++||+.||.+||+|||+++.+++..
T Consensus 458 ~~~iafGGma~~~~rA~~te~~L~Gk~~~~~~l~~A~~~L~~e~~p~~~~~g~~~~YR~~la~~ll~kf~l~~~~~~~~~ 537 (1335)
T 3zyv_A 458 DLGILYGGIGATVISADKSCRQLIGRCWDEEMLDDAGKMICEEVSLLMAAPGGMEEYRKTLAISFLFMFYLDVLKQLKTR 537 (1335)
T ss_dssp EEEEEEESSSSSCC---CTTGGGTTCBC---CHHHHHHHHHHHHHHC--CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCcCccccHHHHHHHhcCCCCCHHHHHHHHHHHHhhcCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999998888889999999999999999999999988764
Q ss_pred CCCcccCCCcccccccccccCCCcccccccccc----CCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEec
Q 001052 569 KNSIKESVPSTHLSAMQSFHRPSIIGNQDYEIT----KHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLS 644 (1172)
Q Consensus 569 ~~~~~~~~~~~~~s~~~~~~r~~~~~~q~~~~~----~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrS 644 (1172)
.....+.+++.+.|+...+++++++|.|.|+.. +.+++||||++|+|+..||||+|+|++|++.+|||||++||||
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~IGk~v~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrS 617 (1335)
T 3zyv_A 538 DPHKYPDISQKLLHILEDFPLTMPYGMQSFQDVDFQQPLQDPIGRPIMHQSGIKHATGEAVFCDDMSVLPGELFLAVVTS 617 (1335)
T ss_dssp C------CCHHHHGGGCCCCCC---CCEECCCCCTTSCTTCCTTSCCCCTTHHHHHHTCCCCSTTSCCCTTCEEEEEEEC
T ss_pred ccccCCCcchhhcccccccCCCCCCcccccccccccCCCCCCCCCCCcCcChHHHCCCcccccccCCCCCCCEEEEEEeC
Confidence 222334577888899999999999999999865 4556899999999999999999999999984479999999999
Q ss_pred CCCCeEeeccChhhhccCCCEEEEEecCCCCCCCCCCCCCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEE
Q 001052 645 RRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEY 724 (1172)
Q Consensus 645 p~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~y 724 (1172)
|++||||++||+++|+++|||++|+|++|+|+.|. ..++|+|++++|+|+|||||+|||+|+++|++|+++|+|+|
T Consensus 618 p~aharI~sID~s~A~~~pGV~aV~T~~DiP~~~~----~~~~~~la~d~Vr~~Gq~VA~VvAet~~~A~~Aa~~V~VeY 693 (1335)
T 3zyv_A 618 SKSHAKIISLDASEALASLGVVDVVTARDVPGDNG----REEESLYAQDEVICVGQIVCAVAADSYAHAQQAAKKVKIVY 693 (1335)
T ss_dssp SSSSEEEEEEECHHHHHSTTEEEEECGGGCSSCCC------CCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEE
T ss_pred CCCCeEEEEEEhHHHhcCCCeEEEEehhhcCCcCC----CCCcccCCCCeEEEcCCEEEEEEECCHHHHHHHhcCCeEEE
Confidence 99999999999999999999999999999998764 35889999999999999999999999999999999999999
Q ss_pred ecC-CccCCHHHHhhcCCCCCCCccccccCCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeC
Q 001052 725 EEL-PAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISS 803 (1172)
Q Consensus 725 e~l-p~v~~~~~A~~~~a~~~~~~~~~~~Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~s 803 (1172)
|++ |.+.++++|++.+++.. ....+++||++++| ++|+++||++|++++|+|+||||++|+|+|+.++|+|+||+|
T Consensus 694 e~l~P~v~~~~~a~~~~~~~~-~~~~~~~Gd~~~af--~~a~~vve~~y~~~~~~h~~mEp~~~~a~~~~edg~l~v~~s 770 (1335)
T 3zyv_A 694 QDIEPMIVTVQDALQYESFIG-PERKLEQGNVEEAF--QCADQILEGEVHLGGQEHFYMETQSVRVVPKGEDKEMDIYVS 770 (1335)
T ss_dssp EECSCCCCSHHHHHHTTCCEE-EEEEEEESCHHHHT--TSSSEEEEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEEC
T ss_pred EeCCCccCCHHHHhhcccccC-ccccccCCCHHHHH--hhCCeEEEEEEEECceeccccCCcceEEEEECCCCeEEEEEC
Confidence 999 56889999999876532 34567899999999 999999999999999999999999999999866789999999
Q ss_pred CCChHHHHHHHHHHhCCCCccEEEEeCccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEE
Q 001052 804 TQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGK 883 (1172)
Q Consensus 804 tQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~ 883 (1172)
||+|+.+|..+|++||||++||||+++++|||||+|.+....++++||++|+++||||||+|||+|+|+.+++||++.++
T Consensus 771 TQ~p~~~r~~lA~~Lglp~~kVrV~~~~vGGGFG~K~~~~~~~~~~aAlaA~~~gRPVK~~~tR~E~~~~~~~R~~~~~~ 850 (1335)
T 3zyv_A 771 SQDAAFTQEMVARTLGIPKNRINCHVKRVGGAFGGKASKPGLLASVAAVAAQKTGRPIRFILERRDDMLITGGRHPLLGK 850 (1335)
T ss_dssp CSCHHHHHHHHHHHHTCCGGGEEEEESCCSCCTTTTSSHHHHHHHHHHHHHHHHCSCEEEECCHHHHHHHSCCBCCEEEE
T ss_pred CcCHHHHHHHHHHHHCCCCceEEEEeCCccCCCCccccCchHHHHHHHHHHHHhCCCEEEEECHHHHHhhcCCCCchheE
Confidence 99999999999999999999999999999999999988666678889999999999999999999999999999999999
Q ss_pred EEEeeCCCCcEEEEEEeEEecCCCCCCchHHHHHHHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHH
Q 001052 884 YKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITEN 963 (1172)
Q Consensus 884 ~k~g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es 963 (1172)
+|+|+|+||+|+|++++++.|+|+|.+.+..++..+..++.++|++||++++++.|+||+||++||||||.||++|++|+
T Consensus 851 ~~~g~d~dG~i~al~~~~~~d~Ga~~~~~~~~~~~~~~~~~g~Y~ipn~~~~~~~v~TN~~~~~a~RG~G~pq~~fa~E~ 930 (1335)
T 3zyv_A 851 YKIGFMNNGKIKAADIQLYINGGCTPDDSELVIEYALLKLENAYKIPNLRVRGRVCKTNLPSNTAFRGFGFPQGAFVTET 930 (1335)
T ss_dssp EEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHH
T ss_pred EEEEecCCCCeeeeeeeeeeccccccccccchhhhhhhhccCcceeeEEEEEEEEEeccCCCCCcccCCCchhheeEecc
Confidence 99999999999999999999999999999989998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCHHHHHHHhcCCCCCcccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCCcceeeeEEeeeec
Q 001052 964 WIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKF 1043 (1172)
Q Consensus 964 ~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~ 1043 (1172)
+||++|++|||||+|||++|++++++.+++|+.+++..+.+||+++++.++|.+|+++.++||+.++|+|||+++++..+
T Consensus 931 ~mD~lA~~lg~DP~elR~~N~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rGi~~~~~~~ 1010 (1335)
T 3zyv_A 931 CMSAVAAKCRLPPEKVRELNMYRTIDRTIHNQEFDPTNLLQCWEACVENSSYYNRKKAVDEFNQQRFWKKRGIAIIPMKF 1010 (1335)
T ss_dssp HHHHHHHHHC-CHHHHHHHHBCCSSCBCTTSCBC--CCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSSEEEEEEEEEEE
T ss_pred hhhHHHHHhCCCHHHHHHHhccCCCccccCCcccccccHHHHHHHHHHhhhHHHHHHhhhhhhccCcceeeeeEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHH
Q 001052 1044 GISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI 1123 (1172)
Q Consensus 1044 g~~~~~~~~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~ 1123 (1172)
+.+++..+.+++.+.|+|++||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+|++++|+|||++++
T Consensus 1011 ~~g~~~~~~~~~~a~v~i~~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t~~ 1090 (1335)
T 3zyv_A 1011 SVGFPKTFYYQAAALVQIYTDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGADV 1090 (1335)
T ss_dssp ECCCSSGGGGCEEEEEEECTTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHH
T ss_pred eccCCcccccceeEEEEEeCCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHHHH
Confidence 98887666778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHh-ccccceeEEee
Q 001052 1124 YGAAVLDACEQIKARMEPIASKHNFNSFAEKIIMFC-NILSSQVHVMF 1170 (1172)
Q Consensus 1124 ~g~Av~~A~~~Lr~rL~~~aa~~~~~~w~~~i~~~~-~~~~~~~~~~~ 1170 (1172)
.|.||++||++|++||+++++++++.+|++++..++ ..+++..++.|
T Consensus 1091 ~G~Av~~Aa~~l~~rl~~~a~~~~~~~~~~~~~~~~~~~v~l~a~~~~ 1138 (1335)
T 3zyv_A 1091 NGRAVQNACQILMKRLEPIIKQNPSGTWEEWVKEAFVQSISLSATGYF 1138 (1335)
T ss_dssp HHHHHHHHHHHHHHHTTTHHHHSTTSCHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhhhcccceeEEEEe
Confidence 999999999999999999999999999999999985 55666655544
No 2
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=100.00 E-value=8.8e-241 Score=2323.47 Aligned_cols=1117 Identities=46% Similarity=0.796 Sum_probs=1026.9
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCc
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1172)
+.|+|+|||+++++.+++|+++||+|||+. ||||||.||++|+||||||+||++|+.++++.+++|||||+|+++++|+
T Consensus 4 ~~i~~~vNg~~~~~~~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 83 (1332)
T 3unc_A 4 DELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHV 83 (1332)
T ss_dssp CCEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTC
T ss_pred ccEEEEECCEEEEeecCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEEecccccccccCCeEeehHHhhHHHhCCC
Confidence 369999999999875699999999999996 9999999999999999999999999999999999999999999999999
Q ss_pred eEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHH
Q 001052 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1172)
Q Consensus 98 ~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1172)
+|+|||||++..+.||||||||+++|++|||||||||||++|+||++++.| |++||+++|+|||||||||++|++|++.
T Consensus 84 ~i~TiEgl~~~~~~~hpvq~a~~~~~~~QCG~CtpG~vms~~~ll~~~~~p-~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 162 (1332)
T 3unc_A 84 AVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEP-TVEEIEDAFQGNLCRCTGYRPILQGFRT 162 (1332)
T ss_dssp EEECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHCSSC-CHHHHHHTTTTCCCSSSCSHHHHHHHGG
T ss_pred EEEEeccccCCCCCcCHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC-CHHHHHHHHhCCcccCCCchhHHHHHHH
Confidence 999999998435689999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhccccccccCCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccccCCCCCCCC-CcCCChhhh
Q 001052 178 FAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEK-ELIFPPELL 256 (1172)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-e~~~p~~l~ 256 (1172)
++.+.+ ||+.......||+++..+... ..+.+ +|.+++|++|||+ |+||||+|+
T Consensus 163 ~~~~~~----------------~c~~~~~g~~cc~~~~~~~~~-------~~~~~--~~~~~~~~~~d~~~e~ifpp~L~ 217 (1332)
T 3unc_A 163 FAKNGG----------------CCGGNGNNPNCCMNQKKDHTV-------TLSPS--LFNPEEFMPLDPTQEPIFPPELL 217 (1332)
T ss_dssp GC---------------------------------------------------CC--SCCGGGSCCCCGGGSCCCCHHHH
T ss_pred HhhcCC----------------cccccccCCcccccccccccc-------ccccc--cccccccCCCCccccccCCHHHh
Confidence 885431 565322112366543222100 01112 6778899999999 999999998
Q ss_pred c---cCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCc
Q 001052 257 L---RKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDG 333 (1172)
Q Consensus 257 ~---~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~ 333 (1172)
. ....++.+.+ ++++||+|+||+||+++|+++|++++|||||+|++++|++...++.+|||++|+||+.|+.++++
T Consensus 218 ~~~~~~~~~l~~~~-~~~~~~~P~sl~ea~~ll~~~~~a~lvaGgT~l~~~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~ 296 (1332)
T 3unc_A 218 RLKDVPPKQLRFEG-ERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEG 296 (1332)
T ss_dssp HHTTSCCCCEEEEC-SSCEEEECCSHHHHHHHHHHCTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSE
T ss_pred hhccccCCceEecC-CceEEEccCCHHHHHHHHhhCCCCEEEEeCcHHHHHhhcCCCCCCeEEEcCCCHHhCceEEeCCE
Confidence 2 3456788887 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEe
Q 001052 334 LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVD 413 (1172)
Q Consensus 334 l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s 413 (1172)
|+|||+|||++|++++++.+++++.+..+.++.|++++++||++||||+||||||||+++|+||++|+|+||||+|+|.+
T Consensus 297 l~IGA~vtl~~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~sD~~~~LlAl~A~v~l~~ 376 (1332)
T 3unc_A 297 ISFGAACALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVS 376 (1332)
T ss_dssp EEEETTCBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTTCSSHHHHHHTTCEEEEEE
T ss_pred EEEEecChHHHHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCchhHHHHHHHcCCEEEEEe
Confidence 99999999999999988888877777778999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEehHh-hhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecC-CcceEEEEE
Q 001052 414 CKGNIRTTMAEE-FFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEK-DEEWVVSDA 491 (1172)
Q Consensus 414 ~~g~~R~vpl~d-F~~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~-~~~~~i~~~ 491 (1172)
.+| +|+||++| ||.||++++|++||||++|+||.+..+.++.+||+++|+++|||+||+|++++++++ + +|+++
T Consensus 377 ~~G-~R~ipl~d~Ff~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~A~V~~A~~v~~~~~~~---~i~~~ 452 (1332)
T 3unc_A 377 RGT-RRTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGSM---QVKEL 452 (1332)
T ss_dssp TTE-EEEEECCGGGCCSTTCCSCCTTCEEEEEEEECCCTTEEEEEEEECSSSSSCCCSEEEEEEEEESTTSS---BEEEE
T ss_pred CCC-cEEEEhHHhhhhccccccCCCCcEEEEEEecCCCCCcceEEEEEecCCCCCcceEEEEEEEEEcCCCC---eEEEE
Confidence 999 99999999 999999999999999999999999877788999999999999999999999999864 4 89999
Q ss_pred EEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhccCCC-
Q 001052 492 LLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKN- 570 (1172)
Q Consensus 492 ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~~~~~- 570 (1172)
||+||||+++|+|++++|++|.||.|+++++++|++.+.++++++.+++++|++||++|+.+||+|||+++.++++...
T Consensus 453 rIa~Ggva~~p~ra~~~E~~L~Gk~~~~~~l~~A~~~l~~~~~~~~~d~~gs~eYR~~La~~ll~r~l~~v~~~~~~~~~ 532 (1332)
T 3unc_A 453 ALCYGGMADRTISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKLGKDSK 532 (1332)
T ss_dssp EEEEESSSSSCEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred EEEEECCCCccccHHHHHHHhcCCCCcHHHHHHHHHHHHhhCCCCcccccCCHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 9999999999999999999999999999999999999999998777788999999999999999999999999886411
Q ss_pred CcccCCCcccccccccccCCCcccccccc----ccCCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCC
Q 001052 571 SIKESVPSTHLSAMQSFHRPSIIGNQDYE----ITKHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRR 646 (1172)
Q Consensus 571 ~~~~~~~~~~~s~~~~~~r~~~~~~q~~~----~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~ 646 (1172)
+..+.+++.+.|+...++||+|+|.|.|+ +.+++++||+|++|+|+..||||+++|++|++.+|||||+++||||+
T Consensus 533 ~~~~~~~~~~~s~~~~~~~~~~~g~q~~~~~~~~~~~~~~iG~~v~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~ 612 (1332)
T 3unc_A 533 DKCGKLDPTYTSATLLFQKDPPANIQLFQEVPNGQSKEDTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTR 612 (1332)
T ss_dssp -----CCTTTGGGGCCCCCCCCEEEEECCCCCTTCCTTCCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSS
T ss_pred cccCCCChhhccccccccCCCCCceeeeecccccccccCcCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEeCCC
Confidence 12346889999999999999999999999 45788899999999999999999999999998447999999999999
Q ss_pred CCeEeeccChhhhccCCCEEEEEecCCCCCCCCCCCCCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEec
Q 001052 647 PHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEE 726 (1172)
Q Consensus 647 a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~ 726 (1172)
+||+|++||+++|+++|||++|+|++|+|+.|.++ ...|+|+|++++|||+|||||+|||+|+|+|++|+++|+|+||+
T Consensus 613 aha~I~sID~s~A~~~pGV~~V~t~~Dip~~~~~g-~~~d~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~Veye~ 691 (1332)
T 3unc_A 613 AHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETG-LFNDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYED 691 (1332)
T ss_dssp SSEEEEEEECTTGGGSTTEEEEECGGGCSSCSEES-TTSCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEEEE
T ss_pred CCeeEeeechHHHhcCCCEEEEEeccccCCcccCC-CCCCcccccCceEEEcCCeEEEEEECCHHHHHHHhhcCceEEEc
Confidence 99999999999999999999999999999988777 55789999999999999999999999999999999999999999
Q ss_pred CCccCCHHHHhhcCCCCCCCccccccCCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCC
Q 001052 727 LPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQA 806 (1172)
Q Consensus 727 lp~v~~~~~A~~~~a~~~~~~~~~~~Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~ 806 (1172)
+|+++|+++|+++++++. ....+.+||++++| ++|+++||++|++++|+|+||||++|+|+|++++|+|+||+|||+
T Consensus 692 lp~v~~~~~A~~~~~~~~-~~~~~~~Gd~~~af--a~A~~vve~~y~~~~~~H~~mEp~~~~A~~~~~~g~l~v~~sTQ~ 768 (1332)
T 3unc_A 692 LPAIITIEDAIKNNSFYG-SELKIEKGDLKKGF--SEADNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQN 768 (1332)
T ss_dssp CCCCCSHHHHHHTTCEEE-EEEEEEESCHHHHH--HHCSEEEEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSC
T ss_pred CCCcCCHHHHhhccCccC-CccccccCCHhHHh--hcCCeEeeeeEEeCCccccCCCCceEEEEEeCCCCeEEEEECCCC
Confidence 999999999999876432 23457899999999 999999999999999999999999999999745778999999999
Q ss_pred hHHHHHHHHHHhCCCCccEEEEeCccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEE
Q 001052 807 PQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKV 886 (1172)
Q Consensus 807 p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~ 886 (1172)
|+.+|..||++||||++||||+++++|||||+|.+....++++||++|+++||||||+|||+|+|+.+++||++.++||+
T Consensus 769 p~~~r~~vA~~Lglp~~kVrV~~~~vGGgFG~K~~~~~~~~~~aAlaA~~~gRPVk~~~tR~e~~~~~~~R~~~~~~~~~ 848 (1332)
T 3unc_A 769 AMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRSTLVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKV 848 (1332)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTHHHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCchhEEEEeCCCCCCCCCCCcccchHHHHHHHHHHHhCCCEEEEecHHHHHhhcCCCCceeEEEEE
Confidence 99999999999999999999999999999999997655678899999999999999999999999999999999999999
Q ss_pred eeCCCCcEEEEEEeEEecCCCCCCchHHHHHHHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHHHHH
Q 001052 887 GFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQ 966 (1172)
Q Consensus 887 g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es~mD 966 (1172)
|+|+||+|+|++++++.|+|+|.+.+..++.+++.++.++|+|||++++++.|+||+||++||||||.+|++|++|++||
T Consensus 849 g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~~a~Rg~G~~q~~fa~E~~mD 928 (1332)
T 3unc_A 849 GFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMDNCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMS 928 (1332)
T ss_dssp EECTTSCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTTTTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHH
T ss_pred EECCCCcEEEEEEEEEEcCCcCccccHHHHHHHHHhcCCCccCCcEEEEEEEEeCCCCCCCcccCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999988888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCHHHHHHHhcCCCCCcccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCCcceeeeEEeeeecccc
Q 001052 967 RVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGIS 1046 (1172)
Q Consensus 967 elA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~ 1046 (1172)
++|++|||||+|||++|++++|+.+++|+.++++.+++||++++++++|++|+++++.||++++|++||+++++..||++
T Consensus 929 elA~~lG~DP~e~R~~N~~~~g~~t~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g 1008 (1332)
T 3unc_A 929 EVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPRCWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGIS 1008 (1332)
T ss_dssp HHHHHHTCCHHHHHHHHBCCTTCBCTTCCBCCSCCHHHHHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEES
T ss_pred HHHHHHCcCHHHHHHHhcCCCCCcCCCCcccCCCCHHHHHHHHHHhcCHHHHHHHHHHhhhcCCcceeeEEEEEEEeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cccccccccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHHhHH
Q 001052 1047 FTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGA 1126 (1172)
Q Consensus 1047 ~~~~~~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~ 1126 (1172)
++....++++|.|+|++||+|+|.+|++|||||++|+++||||++||||+|+|+|..+||+.+|++++|+|||+|+++|.
T Consensus 1009 ~~~~~~~~~~a~v~l~~DGsv~v~~g~~e~GQG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~P~~~~t~aSr~t~~~G~ 1088 (1332)
T 3unc_A 1009 FTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQ 1088 (1332)
T ss_dssp CSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHHHHH
T ss_pred ccCCCCCcceEEEEEcCCCeEEEEECCcCCCCCHHHHHHHHHHHHhCCCHHHEEEEcCCCCCCCCCCCccHHHHHHHHHH
Confidence 86655678899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHh-ccccceeEEee
Q 001052 1127 AVLDACEQIKARMEPIASKHNFNSFAEKIIMFC-NILSSQVHVMF 1170 (1172)
Q Consensus 1127 Av~~A~~~Lr~rL~~~aa~~~~~~w~~~i~~~~-~~~~~~~~~~~ 1170 (1172)
||++||++|++||++++++.++.+|++++..++ ..+++..++.|
T Consensus 1089 Av~~A~~~l~~rl~~~aa~~~~~~~~~~~~~a~~~~~~l~~~~~~ 1133 (1332)
T 3unc_A 1089 AVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVSLSTTGFY 1133 (1332)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHTTCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhhccCCceEEEEEE
Confidence 999999999999999999999999999998885 55666666655
No 3
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=100.00 E-value=1.3e-151 Score=1444.53 Aligned_cols=709 Identities=29% Similarity=0.446 Sum_probs=641.9
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhcc-CC
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL-EG 96 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g 96 (1172)
+.|+|+|||+.++++ ++|+++|||+||+. +|||||.||++|.||||||+||+ ++++||++|+.++ +|
T Consensus 2 ~~~~~~~ng~~~~~~-~~~~~~ll~~Lr~~~~l~g~k~gC~~g~CGaCtv~vdg----------~~~~sC~~~~~~~~~g 70 (907)
T 1vlb_A 2 IQKVITVNGIEQNLF-VDAEALLSDVLRQQLGLTGVKVGCEQGQCGACSVILDG----------KVVRACVTKMKRVADG 70 (907)
T ss_dssp EEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGSCTT
T ss_pred ceEEEEECCEEEEEe-cCCCChHHHHHHHhcCCCeecCCCCCCCcCccEEEECC----------eEeechHhHHHHHcCC
Confidence 469999999999996 99999999999995 99999999999999999999997 8999999999999 99
Q ss_pred ceEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhh--cCccccCCChhHHHH
Q 001052 97 MHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLA--GNLCRCTGYRPIVDA 174 (1172)
Q Consensus 97 ~~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~--gnlCRCtgy~~i~~a 174 (1172)
++|+|||||+ +.+.|||+|+||+++|++|||||||||||++++||++|+.| |++||+++|+ |||||||||.+|++|
T Consensus 71 ~~i~Tiegl~-~~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~~~~p-~~~~i~~~~~~~gn~cRctgY~~i~~a 148 (907)
T 1vlb_A 71 AQITTIEGVG-QPENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADP-SREDVRDWFQKHRNACRCTGYKPLVDA 148 (907)
T ss_dssp CEEECHHHHC-BTTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHTTCSSC-CHHHHHHHHHHTTCCCSSSCSHHHHHH
T ss_pred CcEEEECCCC-CCcCcCHHHHHHHHcCCCCCCcChHHHHHHHHHHHHcCCCC-CHHHHHHHHHhcCCCccccchHHHHHH
Confidence 9999999998 56789999999999999999999999999999999999999 9999999999 999999999999999
Q ss_pred HHHHHhccccccccCCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccccCCCCCCCCCcCCChh
Q 001052 175 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254 (1172)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~p~~ 254 (1172)
++.++.... + . .|+
T Consensus 149 ~~~aa~~~~---------------------~--------------------------~------------------~~~- 162 (907)
T 1vlb_A 149 VMDAAAVIN---------------------G--------------------------K------------------KPE- 162 (907)
T ss_dssp HHHHHHHHT---------------------T--------------------------S------------------SCG-
T ss_pred HHHHHHhhc---------------------c--------------------------C------------------Ccc-
Confidence 987652100 0 0 000
Q ss_pred hhccCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcE
Q 001052 255 LLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGL 334 (1172)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l 334 (1172)
T Consensus 163 -------------------------------------------------------------------------------- 162 (907)
T 1vlb_A 163 -------------------------------------------------------------------------------- 162 (907)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeC
Q 001052 335 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDC 414 (1172)
Q Consensus 335 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~ 414 (1172)
+
T Consensus 163 --------------------~----------------------------------------------------------- 163 (907)
T 1vlb_A 163 --------------------T----------------------------------------------------------- 163 (907)
T ss_dssp --------------------G-----------------------------------------------------------
T ss_pred --------------------c-----------------------------------------------------------
Confidence 0
Q ss_pred CCCeEEEehHhhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEE
Q 001052 415 KGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLV 494 (1172)
Q Consensus 415 ~g~~R~vpl~dF~~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria 494 (1172)
+| . |
T Consensus 164 ----------~~-------~-----------------------~------------------------------------ 167 (907)
T 1vlb_A 164 ----------DL-------E-----------------------F------------------------------------ 167 (907)
T ss_dssp ----------GG-------S-----------------------C------------------------------------
T ss_pred ----------cc-------c-----------------------c------------------------------------
Confidence 00 0 0
Q ss_pred EccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhccCCCCccc
Q 001052 495 YGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKE 574 (1172)
Q Consensus 495 ~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~~~~~~~~~ 574 (1172)
+.
T Consensus 168 ------------------------------------------------------------------------k~------ 169 (907)
T 1vlb_A 168 ------------------------------------------------------------------------KM------ 169 (907)
T ss_dssp ------------------------------------------------------------------------CC------
T ss_pred ------------------------------------------------------------------------cC------
Confidence 00
Q ss_pred CCCcccccccccccCCCccccccccccCCCCccCCcccccCccccccceeeccccC---CCCCCcEEEEEEecCCCCeEe
Q 001052 575 SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDDT---PMPPNCLHAALVLSRRPHARI 651 (1172)
Q Consensus 575 ~~~~~~~s~~~~~~r~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di---~~~~gmL~a~~vrSp~a~a~I 651 (1172)
+.++++||++++|+|+..||||+++|++|+ .+ |||||+++||||++||||
T Consensus 170 --------------------------p~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~-~gmL~a~~vrSp~aharI 222 (907)
T 1vlb_A 170 --------------------------PADGRIWGSKYPRPTAVAKVTGTLDYGADLGLKMP-AGTLHLAMVQAKVSHANI 222 (907)
T ss_dssp --------------------------CSSCCCTTSCCCCTTHHHHHTTCSCCHHHHHHTSC-TTCEEEEEEECSSSSEEE
T ss_pred --------------------------ccccccCCCcCccccchhhcCCceeeecccCcCCC-CCCeEEEEEecCCCCeEE
Confidence 011256999999999999999999999999 66 799999999999999999
Q ss_pred eccChhhhccCCCEEEEEecCCCCCCC-CCCC--------CCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCee
Q 001052 652 LSIDDSGARSSPGFVGIFFAEDVQGDN-RIGP--------VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQV 722 (1172)
Q Consensus 652 ~sID~s~A~~~pGVv~Vvt~~Dipg~n-~~~~--------~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V 722 (1172)
++||+++|+++|||++|+|++|+|+.+ .++. ...|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|
T Consensus 223 ~sID~s~A~~~pGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vr~~Gq~VA~VvA~t~~~A~~Aa~~v~V 302 (907)
T 1vlb_A 223 KGIDTSEALTMPGVHSVITHKDVKGKNRITGLITFPTNKGDGWDRPILCDEKVFQYGDCIALVCADSEANARAAAEKVKV 302 (907)
T ss_dssp EEEECHHHHTSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEE
T ss_pred EEechhHHhcCCCeEEEEEcccCcccccccCccccccccccCCCchhccCCeEEEcCCeEEEEEECCHHHHHHHhcceEE
Confidence 999999999999999999999999743 2232 2468899999999999999999999999999999999999
Q ss_pred EEecCCccCCHHHHhhcCCC--CC---C--CccccccCCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCC
Q 001052 723 EYEELPAILSIQEAIDAKSF--HP---N--TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG 795 (1172)
Q Consensus 723 ~ye~lp~v~~~~~A~~~~a~--~~---~--~~~~~~~Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~ 795 (1172)
+||++|+++|+++|++++++ |+ | ....+.+||++++|. ++|+++||++|++++|+|+||||++|+|+|+ ++
T Consensus 303 eye~lp~v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~-a~A~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~ 380 (907)
T 1vlb_A 303 DLEELPAYMSGPAAAAEDAIEIHPGTPNVYFEQPIVKGEDTGPIF-ASADVTVEGDFYVGRQPHMPIEPDVAFAYMG-DD 380 (907)
T ss_dssp EEEECCCCCSHHHHHSTTCCCSSTTSCSEEEEEEEEESSCHHHHH-HHCSEEEEEEEEECCCCCCCSSCCEEEEEEC-TT
T ss_pred EEEcCCCCCCHHHHHhhcCccccccccccccccccccCChhhhhc-ccCCeEEEEEEEECCccccCCCCCeEEEEEc-CC
Confidence 99999999999999998873 33 1 123457899999982 3578999999999999999999999999998 46
Q ss_pred CeEEEEeCCCChHHHHHHHHHHhCCCCccEEEEeCccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcC
Q 001052 796 NEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISG 875 (1172)
Q Consensus 796 g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~ 875 (1172)
|+|+||+|||+|+.+|..+|++||||++||||+++++|||||+|.+.. .++.||++|+++||||||+|||+|+|+.++
T Consensus 381 g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVkl~~tR~e~~~~~~ 458 (907)
T 1vlb_A 381 GKCYIHSKSIGVHLHLYMIAPGVGLEPDQLVLVANPMGGTFGYKFSPT--SEALVAVAAMATGRPVHLRYNYQQQQQYTG 458 (907)
T ss_dssp SCEEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTGGGSCS--SHHHHHHHHHHHSSCEEEECCHHHHHHSSC
T ss_pred CcEEEEECCcChHHHHHHHHHHhCCChhhEEEEeCcCCCCCCCCcccc--HHHHHHHHHHHhCCCEEEEechHHHhhccC
Confidence 789999999999999999999999999999999999999999998754 378899999999999999999999999999
Q ss_pred CCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCCchHHHHHHHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCChh
Q 001052 876 QRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGP 955 (1172)
Q Consensus 876 ~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~ 955 (1172)
+||++.+++|+|+|+||+|+|++++++.|+|+|.+++..++.++..++.++|+|||++++++.|+||++|++||||||.+
T Consensus 459 ~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~ 538 (907)
T 1vlb_A 459 KRSPWEMNVKFAAKKDGTLLAMESDWLVDHGPYSEFGDLLTLRGAQFIGAGYNIPNIRGLGRTVATNHVWGSAFRGYGAP 538 (907)
T ss_dssp BCCCEEEEEEEEECTTCCEEEEEEEEEEECTTCCTTHHHHHHHHHHHTTTTBCCCEEEEEEEEECCSSCCBCCCTTTTHH
T ss_pred CCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHhccCCCcCCCcEEEEEEEEcCCCCCCcccCCCChH
Confidence 99999999999999999999999999999999998888787777788899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCCcceee
Q 001052 956 QGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRG 1035 (1172)
Q Consensus 956 q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grG 1035 (1172)
|++|++|++|||+|++|||||+|||++|++++++.+++|+.+++.++++||++++++ |++|+++.+.| ..++| +||
T Consensus 539 q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~g~~~~~~~~~~~l~~~~~~--w~~r~~~~~~~-~~g~~-~rG 614 (907)
T 1vlb_A 539 QSMFASECLMDMLAEKLGMDPLELRYKNAYRPGDTNPTGQEPEVFSLPDMIDQLRPK--YQAALEKAQKE-STATH-KKG 614 (907)
T ss_dssp HHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHHH-CCSSE-EEE
T ss_pred HHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcCCCCccccCccHHHHHHHHHHH--HHHhhhhhhhc-cCCCc-eeE
Confidence 999999999999999999999999999999999999999999999999999999998 99887776655 35666 467
Q ss_pred eEEeeeecccccccccccccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHh---CCCCCcEEEEeCCCCCCCCC
Q 001052 1036 IAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSETSTDKVPNA 1112 (1172)
Q Consensus 1036 ia~~~~~~g~~~~~~~~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~L---gip~e~V~v~~~dT~~~p~~ 1112 (1172)
+|+++..++.+++ ..++++|.|+|++||+|+|.+|++|||||++|+++||+|++| |||+|+|+|..+||+.+|++
T Consensus 615 iGiA~~~~~~g~~--~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~ 692 (907)
T 1vlb_A 615 VGISIGVYGSGLD--GPDASEAWAELNADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNS 692 (907)
T ss_dssp EEEEEEEEESSST--TTCEEEEEEEECTTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCC
T ss_pred EEEEEEEeccccC--CCCCccEEEEEeCCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCC
Confidence 7777677776653 235678999999999999999999999999999999999999 99999999999999999999
Q ss_pred ccCcccchhHHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Q 001052 1113 SPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAEKIIMF 1158 (1172)
Q Consensus 1113 ~~t~~Sr~t~~~g~Av~~A~~~Lr~rL~~~aa~~~~~~w~~~i~~~ 1158 (1172)
++|+|||+|++.|.||++||++||+||+++|+++. +|+|++..+
T Consensus 693 ~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l--~~~el~~~~ 736 (907)
T 1vlb_A 693 GPSGGSRQQVMTGNAIRVACENLLKACEKPGGGYY--TYDELKAAD 736 (907)
T ss_dssp CCSCTTCHHHHHHHHHHHHHHHHHHHHBCTTSSBC--CHHHHHHTT
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHHHHHHhhccC--CHHHHHhhc
Confidence 99999999999999999999999999999998764 999999876
No 4
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=100.00 E-value=1.4e-151 Score=1444.20 Aligned_cols=707 Identities=29% Similarity=0.440 Sum_probs=639.3
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhcc-CC
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL-EG 96 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g 96 (1172)
+.|+|+|||+.++++ ++|+++|||+||+. ||||||.||++|.||||||+||+ ++++||++|+.++ +|
T Consensus 2 ~~~~~~~ng~~~~~~-~~~~~~ll~~Lr~~~~l~g~k~gC~~G~CGaCtv~vdg----------~~v~sC~~~~~~~~~g 70 (907)
T 1dgj_A 2 ETKTLIVNGMARRLL-VSPNDLLVDVLRSQLQLTSVKVGCGKGQCGACTVILDG----------KVVRACIIKMSRVAEN 70 (907)
T ss_dssp EEEECEETTBCCEEE-ECTTCBHHHHHHHTTCCTTSCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGSCTT
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHHhcCCCccCCCCCCCCcCceEEEECC----------eEeehhHhHHHHHcCC
Confidence 469999999999996 99999999999995 99999999999999999999997 8999999999999 99
Q ss_pred ceEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhh--cCccccCCChhHHHH
Q 001052 97 MHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLA--GNLCRCTGYRPIVDA 174 (1172)
Q Consensus 97 ~~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~--gnlCRCtgy~~i~~a 174 (1172)
++|+|||||+ +.+.|||+|+||+++|++|||||||||||++++||++|+.| |++||+++|+ |||||||||.+|++|
T Consensus 71 ~~i~TiEgl~-~~~~~~~~q~a~~~~~~~qCG~c~pg~~~~~~~ll~~~~~p-~~~~i~~~~~~~gnlcRctgY~~i~~a 148 (907)
T 1dgj_A 71 ASVTTLEGIG-APDCLHPLQHAWIQHGAAQCGFCTPGFIVSAKALLDENVAP-SREDVRDWFQKHHNICRCTGYKPLVDA 148 (907)
T ss_dssp CEEECGGGTC-BTTBCCHHHHHHHHHTCCSSCTTHHHHHHHHHHHHHHCSSC-CHHHHHHHHHHTTCCCSSSCSHHHHHH
T ss_pred CcEEEECCCC-CCcccCHHHHHHHHcCCCCCCcChhHHHHHHHHHHhcCCCC-CHHHHHHHHHhcCCCcccccHHHHHHH
Confidence 9999999998 56789999999999999999999999999999999999999 9999999999 999999999999999
Q ss_pred HHHHHhccccccccCCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccccCCCCCCCCCcCCChh
Q 001052 175 FRVFAKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPE 254 (1172)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~p~~ 254 (1172)
++.++....
T Consensus 149 ~~~aa~~~~----------------------------------------------------------------------- 157 (907)
T 1dgj_A 149 VMDAAAILR----------------------------------------------------------------------- 157 (907)
T ss_dssp HHHHHHHHT-----------------------------------------------------------------------
T ss_pred HHHHHHhhc-----------------------------------------------------------------------
Confidence 987652100
Q ss_pred hhccCCCCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcE
Q 001052 255 LLLRKSNPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGL 334 (1172)
Q Consensus 255 l~~~~~~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l 334 (1172)
+ . .
T Consensus 158 ------------~--~--------------------------------------------------~------------- 160 (907)
T 1dgj_A 158 ------------G--E--------------------------------------------------K------------- 160 (907)
T ss_dssp ------------T--S--------------------------------------------------S-------------
T ss_pred ------------c--C--------------------------------------------------C-------------
Confidence 0 0 0
Q ss_pred EEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeC
Q 001052 335 EIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDC 414 (1172)
Q Consensus 335 ~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~ 414 (1172)
+
T Consensus 161 -------------------~------------------------------------------------------------ 161 (907)
T 1dgj_A 161 -------------------T------------------------------------------------------------ 161 (907)
T ss_dssp -------------------C------------------------------------------------------------
T ss_pred -------------------C------------------------------------------------------------
Confidence 0
Q ss_pred CCCeEEEehHhhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEE
Q 001052 415 KGNIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLV 494 (1172)
Q Consensus 415 ~g~~R~vpl~dF~~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria 494 (1172)
.++|.
T Consensus 162 --------~~~~~------------------------------------------------------------------- 166 (907)
T 1dgj_A 162 --------VEEIS------------------------------------------------------------------- 166 (907)
T ss_dssp --------HHHHS-------------------------------------------------------------------
T ss_pred --------hhhhc-------------------------------------------------------------------
Confidence 00000
Q ss_pred EccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhccCCCCccc
Q 001052 495 YGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQMEGKNSIKE 574 (1172)
Q Consensus 495 ~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~~~~~~~~~ 574 (1172)
++.
T Consensus 167 -----------------------------------------------------------------------~k~------ 169 (907)
T 1dgj_A 167 -----------------------------------------------------------------------FKM------ 169 (907)
T ss_dssp -----------------------------------------------------------------------CCC------
T ss_pred -----------------------------------------------------------------------ccC------
Confidence 000
Q ss_pred CCCcccccccccccCCCccccccccccCCCCccCCcccccCccccccceeecccc--C-CCCCCcEEEEEEecCCCCeEe
Q 001052 575 SVPSTHLSAMQSFHRPSIIGNQDYEITKHGTSVGSPEVHLSSRLQVTGEAEYTDD--T-PMPPNCLHAALVLSRRPHARI 651 (1172)
Q Consensus 575 ~~~~~~~s~~~~~~r~~~~~~q~~~~~~~~~~vG~~~~r~d~~~kvtG~a~Y~~D--i-~~~~gmL~a~~vrSp~a~a~I 651 (1172)
+.++++||++++|+|+..||||+++|++| + .+ |||||+++||||++||+|
T Consensus 170 --------------------------p~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~~-~gmL~a~~vrSp~aharI 222 (907)
T 1dgj_A 170 --------------------------PADGRIWGSSIPRPSAVAKVTGLAEFGADAALRMP-ENTLHLALAQAKVSHALI 222 (907)
T ss_dssp --------------------------CTTCCCTTSCCCCTTHHHHHHTCCCBHHHHGGGSC-TTCEEEEEEECSSSSEEE
T ss_pred --------------------------cccccccCCCCCCcchhhhcCCceEeecCcCccCC-CCCeEEEEEecCCCCEEE
Confidence 01124699999999999999999999999 8 66 799999999999999999
Q ss_pred eccChhhhccCCCEEEEEecCCCCCCCC-CCC--------CCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCee
Q 001052 652 LSIDDSGARSSPGFVGIFFAEDVQGDNR-IGP--------VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQV 722 (1172)
Q Consensus 652 ~sID~s~A~~~pGVv~Vvt~~Dipg~n~-~~~--------~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V 722 (1172)
++||+++|+++|||++|+|++|+|+.+. ++. ...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|
T Consensus 223 ~sID~s~A~~~PGV~~V~t~~D~p~~~~~~g~~~~~~~~~~~~~~~~la~~~Vry~Gq~VA~VvAet~~~A~~Aa~~v~V 302 (907)
T 1dgj_A 223 KGIDTSEAEKMPGVYKVLTHKDVKGKNRITGLITFPTNKGDGWERPILNDSKIFQYGDALAIVCADSEANARAAAEKVKF 302 (907)
T ss_dssp EEEECHHHHHSTTEEEEECGGGCCSCSEECCSSCCTTCSSCSCCEESSCSSEECSTTCEEEEEEESSHHHHHHHHTTCEE
T ss_pred EeCChHHHhcCCCcEEEEEcccCCccccccCccccccccccCCCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccEE
Confidence 9999999999999999999999997432 232 2468899999999999999999999999999999999999
Q ss_pred EEecCCccCCHHHHhhcCCC--CC---C--CccccccCCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCC
Q 001052 723 EYEELPAILSIQEAIDAKSF--HP---N--TERCFRKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHG 795 (1172)
Q Consensus 723 ~ye~lp~v~~~~~A~~~~a~--~~---~--~~~~~~~Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~ 795 (1172)
+||++|+++|+++|++++++ |+ | ....+.+||++++|..++|+++||++|++++|+|+||||++|+|+|+ ++
T Consensus 303 eye~lp~v~~~~~Al~~~a~~i~~~~~n~~~~~~~~~Gd~~~af~~a~A~~vve~~y~~~~~~h~~mEp~~~~A~~~-~~ 381 (907)
T 1dgj_A 303 DLELLPEYMSAPEAMAPDAIEIHPGTPNVYYDQLEEKGEDTVPFFNDPANVVAEGSYYTQRQPHLPIEPDVGYGYIN-EQ 381 (907)
T ss_dssp EEEECCCCCSHHHHHSTTCCCSBTTBCSEEEEEEEEESSCSHHHHSCTTSEEEEEEEEECCCCCCCSSCCEEEEEEC-TT
T ss_pred EEEcCCCCCCHHHHHhhcCcccccccccccceeccccCChhhhhcccCCCEEEEEEEEECCccccCCCCCeEEEEEc-CC
Confidence 99999999999999998873 43 1 12345789999999113578999999999999999999999999998 46
Q ss_pred CeEEEEeCCCChHHHHHHHHHHhCCC-CccEEEEeCccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhc
Q 001052 796 NEVHMISSTQAPQKHQKYVSHVLGLP-MSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMIS 874 (1172)
Q Consensus 796 g~l~V~~stQ~p~~~r~~vA~~Lglp-~~kV~V~~~~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~ 874 (1172)
|+|+||+|||+|+.+|..+|++|||| ++||||+++++|||||+|.+.. .++.||++|+++||||||+|||+|+|+.+
T Consensus 382 g~l~v~~stQ~p~~~r~~lA~~Lglp~~~~VrV~~~~vGGgFG~K~~~~--~~~~aA~~A~~~grPVkl~~tR~e~~~~~ 459 (907)
T 1dgj_A 382 GQVVIHSKSVAIHLHALMIAPGLGLEFPKDLVLVQNTTGGTFGYKFSPT--MEALVGVAVMATGRPCHLRYNYEQQQNYT 459 (907)
T ss_dssp SCEEEEECCSCHHHHHHHHHHHHTCCTTTTEEEEECBCSCCTTGGGSCS--SHHHHHHHHHHHCSCEEEECCHHHHHHSS
T ss_pred CcEEEEECCcCHHHHHHHHHHHhCCCCCccEEEEeCCCCCCCCCCcccc--HHHHHHHHHHHhCCCEEEEeehHHHhhhc
Confidence 78999999999999999999999999 9999999999999999998754 37889999999999999999999999999
Q ss_pred CCCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCCchHHHHHHHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCCh
Q 001052 875 GQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGG 954 (1172)
Q Consensus 875 ~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~ 954 (1172)
++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..++.++..++.++|++||++++++.|+||++|++||||||.
T Consensus 460 ~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~ 539 (907)
T 1dgj_A 460 GKRSPFWTTMRYAADRQGKILAMETDWSVDHGPYSEFGDLLTLRGAQYIGAGYGIANIRGTGRTVATNHCWGAAFRGYGA 539 (907)
T ss_dssp CBCCCEEEEEEEEECTTSCEEEEEEEEEEECCSCCTTHHHHHHHHHHHTTTTBCCSEEEEEEEEECCSSCCBCCCTTTTH
T ss_pred CCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchHHHHHHHHhcCCCcCCCcEEEEEEEEcCCCCCCcccCCCCH
Confidence 99999999999999999999999999999999999888878777778889999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCCccee
Q 001052 955 PQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKR 1034 (1172)
Q Consensus 955 ~q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~gr 1034 (1172)
+|++|++|++||++|++|||||+|||++|++++++.+++|+.+++.++++||++++++ |++|+++.+.| ..++| +|
T Consensus 540 ~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~g~~~~s~~~~~~l~~~~~~--w~~r~~~~~~~-~~g~~-~r 615 (907)
T 1dgj_A 540 PESEFPSEVLMDELAEKLGMDPFELRALNCYREGDTTSSGQIPEVMSLPEMFDKMRPY--YEESKKRVKER-STAEI-KR 615 (907)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCCCTTSCCCSCCCHHHHHHHHHHH--HHHHHHHHHTT-CCSSE-EE
T ss_pred HHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCcCCCCccccCccHHHHHHHHHHH--HHhhhhhhhcc-cCCCe-eE
Confidence 9999999999999999999999999999999999999999999999999999999998 99887777665 35667 46
Q ss_pred eeEEeeeecccccccccccccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHh---CCCCCcEEEEeCCCCCCCC
Q 001052 1035 GIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSETSTDKVPN 1111 (1172)
Q Consensus 1035 Gia~~~~~~g~~~~~~~~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~L---gip~e~V~v~~~dT~~~p~ 1111 (1172)
|+|+++..++.+++ ..++++|.|+|++||+|+|.+|++|||||++|+++||+|++| |||+|+|+|..+||+.+|+
T Consensus 616 G~Gia~~~~~~g~~--~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~ 693 (907)
T 1dgj_A 616 GVGVALGVYGAGLD--GPDTSEAWVELNDDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPN 693 (907)
T ss_dssp EEEEEEEEEEESSS--SSCEEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTTSCC
T ss_pred EEEEEEEEecccCC--CCCCccEEEEEeCCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCC
Confidence 66666666666553 235678999999999999999999999999999999999999 9999999999999999999
Q ss_pred CccCcccchhHHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Q 001052 1112 ASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAEKI 1155 (1172)
Q Consensus 1112 ~~~t~~Sr~t~~~g~Av~~A~~~Lr~rL~~~aa~~~~~~w~~~i 1155 (1172)
+++|+|||+|++.|.||++||++||+||+++|+++. +|+++.
T Consensus 694 ~~~t~gSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~l--~~~~l~ 735 (907)
T 1dgj_A 694 SGPAGGSRSQVVTGNAIRVACEMLIEGMRKPGGGFF--TPAEMK 735 (907)
T ss_dssp CCCSCTTCTTTHHHHHHHHHHHHHHHHTBCSSSSBC--CHHHHH
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhcC--CHHHHh
Confidence 999999999999999999999999999999999876 899998
No 5
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=100.00 E-value=3.4e-121 Score=1145.53 Aligned_cols=562 Identities=48% Similarity=0.828 Sum_probs=530.3
Q ss_pred CccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCCCCCCCC
Q 001052 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVV 684 (1172)
Q Consensus 605 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~~~~ 684 (1172)
++|||+++|+|+..||||+++|++|++.+|||||+++||||++||+|++||+++|+++|||++|+|++|+|+.|.++ ..
T Consensus 1 ~~iG~~~~R~d~~~kvtG~a~Y~~Di~~~pgmL~a~~vrSp~aha~I~siD~s~A~~~pGV~~V~t~~d~p~~~~~g-~~ 79 (755)
T 3nvz_C 1 DTVGRPLPHLAAAMQASGEAVYCDDIPRYENELFLRLVTSTRAHAKIKSIDVSEAQKVPGFVCFLSADDIPGSNETG-LF 79 (755)
T ss_dssp CCTTSCCCCTTHHHHHHTCSCCGGGSCCBTTCEEEEEEECSSSSEEEEEEECTTGGGSTTEEEEECGGGCSSCSEES-TT
T ss_pred CCCCCCCcCcchHHhcccccccccccCCCCCcEEEEEEECCCCCeEEEEeehHHHhcCCCeEEEEEcCCCCccccCC-CC
Confidence 46999999999999999999999999843799999999999999999999999999999999999999999988776 45
Q ss_pred CCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCCCCCCCccccccCCcccccccCCC
Q 001052 685 ADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQC 764 (1172)
Q Consensus 685 ~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~~~~~~Gd~e~af~~~~a 764 (1172)
.|+|+|++++|||+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|++++++.. ....+.+||++++| ++|
T Consensus 80 ~~~~~la~~~Vry~Gq~Va~VvA~t~~~A~~Aa~~v~Veye~lp~v~~~~~a~~~~~~~~-~~~~~~~Gd~~~a~--a~A 156 (755)
T 3nvz_C 80 NDETVFAKDTVTCVGHIIGAVVADTPEHAERAAHVVKVTYEDLPAIITIEDAIKNNSFYG-SELKIEKGDLKKGF--SEA 156 (755)
T ss_dssp SCEESSCCSEECSTTCEEEEEEESSHHHHHHHHHTCEEEEEECCCCCSHHHHHHTTCEEE-EEEEEEESCHHHHH--HHC
T ss_pred CCcccccCCeEEEcCCeEEEEEECCHHHHHHHhcccceEEEcCCCCCCHHHHhhccCccC-CCcccccCCHhHHh--hcC
Confidence 789999999999999999999999999999999999999999999999999998876432 23456899999999 999
Q ss_pred cEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCccEEEEeCccCCCCCCCCCcch
Q 001052 765 DKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSA 844 (1172)
Q Consensus 765 ~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG~K~~~~~ 844 (1172)
+++||++|++|+|+|+||||++|+|+|++++|+|+||+|||+|+.+|..||++||||++||||+++++|||||+|.....
T Consensus 157 ~~vve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~ 236 (755)
T 3nvz_C 157 DNVVSGELYIGGQDHFYLETHCTIAIPKGEEGEMELFVSTQNAMKTQSFVAKMLGVPVNRILVRVKRMGGGFGGKETRST 236 (755)
T ss_dssp SEEEEEEEEECCBCCCCSSCCEEEEEECSSTTCEEEEECCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTSSTTH
T ss_pred CeEEEEEEEeCCccccCCCCceEEEEEeCCCCeEEEEECCCCHHHHHHHHHHHHCCCCccEEEEECCCCCCCCCcccccc
Confidence 99999999999999999999999999974577899999999999999999999999999999999999999999987545
Q ss_pred HHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCCchHHHHHHHhhccC
Q 001052 845 FIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSD 924 (1172)
Q Consensus 845 ~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~ 924 (1172)
.++++||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.+.+..++.+++.++.
T Consensus 237 ~~~~~aa~aA~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~~~~~~~~~~~ 316 (755)
T 3nvz_C 237 LVSVAVALAAYKTGHPVRCMLDRNEDMLITGGRHPFLARYKVGFMKTGTIVALEVDHYSNAGNSRDLSHSIMERALFHMD 316 (755)
T ss_dssp HHHHHHHHHHHHHSSCEEEECCHHHHHHHSCCBCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCTTHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHhCCCEEEEecHHHHHhhcCCCCceEEEEEEEECCCCcEEEEEEEEEEccCcCcCccHHHHHHHHHhcC
Confidence 56889999999999999999999999999999999999999999999999999999999999999988778888888899
Q ss_pred CCCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcccccccccCCCHHH
Q 001052 925 NVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQQLQHCTLFP 1004 (1172)
Q Consensus 925 ~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~~~~~~~l~~ 1004 (1172)
++|+|||++++++.|+||+||++||||||.+|++|++|++|||+|++|||||+|||++|++++++.+++|+.++++.+++
T Consensus 317 ~~Y~ipn~~~~~~~v~Tn~~~~~a~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~g~~~~s~~~~~ 396 (755)
T 3nvz_C 317 NCYKIPNIRGTGRLCKTNLSSNTAFRGFGGPQALFIAENWMSEVAVTCGLPAEEVRWKNMYKEGDLTHFNQRLEGFSVPR 396 (755)
T ss_dssp TTBCCSSEEEEEEEEECSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHBCCTTCBCTTCCBCTTCCHHH
T ss_pred CCccCCcEEEEEEEEeCCCCCCCcccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCcCCCCccccCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcChHhhHHHHhhcccCCCcceeeeEEeeeecccccccccccccceEEEEeeCCeEEEEeCCccCCCChHHHH
Q 001052 1005 LWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKV 1084 (1172)
Q Consensus 1005 ~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~ 1084 (1172)
||++++++++|++|+++.+.||++++|++||+++++..+|++++....++++|.|+|++||+|+|.+|++|||||++|++
T Consensus 397 ~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGig~~~~~~g~g~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GQG~~T~~ 476 (755)
T 3nvz_C 397 CWDECLKSSQYYARKSEVDKFNKENCWKKRGLCIIPTKFGISFTVPFLNQAGALIHVYTDGSVLVSHGGTEMGQGLHTKM 476 (755)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHCSSEEEEEEEEEEEEEESCSSGGGCEEEEEEEECTTSCEEEEESCCCSSSCHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHhhhccCCccceeEEEEEEEecccccCCCCCcceEEEEEecCCeEEEEECCCCCCCCHHHHH
Confidence 99999999999999999888998899999999999999998886555678899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHh-cccc
Q 001052 1085 AQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKHNFNSFAEKIIMFC-NILS 1163 (1172)
Q Consensus 1085 ~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~A~~~Lr~rL~~~aa~~~~~~w~~~i~~~~-~~~~ 1163 (1172)
+||+|++||||+|+|+|..+||+.+|++++|+|||+|+++|.||++||++||+||++++++.++.+|++++..++ ..++
T Consensus 477 aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~~~~~~~~~~~~~~~~~~~ 556 (755)
T 3nvz_C 477 VQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKKNPDGSWEDWVMAAYQDRVS 556 (755)
T ss_dssp HHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998885 4566
Q ss_pred ceeEEee
Q 001052 1164 SQVHVMF 1170 (1172)
Q Consensus 1164 ~~~~~~~ 1170 (1172)
+..++.|
T Consensus 557 l~~~~~~ 563 (755)
T 3nvz_C 557 LSTTGFY 563 (755)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 6666654
No 6
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=100.00 E-value=8.3e-118 Score=1119.39 Aligned_cols=559 Identities=42% Similarity=0.651 Sum_probs=521.5
Q ss_pred ccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCCCCCCCCC
Q 001052 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGPVVA 685 (1172)
Q Consensus 606 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~~~~~ 685 (1172)
+||++++|+|+..||||+++|++|++.+|||||+++||||++||+|++||+++|+++|||++|+|++|+|+.|.+++...
T Consensus 2 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~~~gmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p~~~~~g~~~~ 81 (777)
T 2w3s_B 2 SVGKPLPHDSARAHVTGQARYLDDLPCPANTLHLAFGLSTEASAAITGLDLEPVRESPGVIAVFTAADLPHDNDASPAPS 81 (777)
T ss_dssp CTTSCCCCTTHHHHHHTCCCCGGGSCCCTTCEEEEEEECSCSSEEEEEEECHHHHTSTTEEEEEEGGGCSSCCCCCSSSS
T ss_pred CCCCCCCCcchHHhccccceeccccCCCCCCEEEEEEECCCCCeEEEEeEhHHHhcCCCcEEEEEcccCCCcccCCCCCC
Confidence 48999999999999999999999995338999999999999999999999999999999999999999999887777678
Q ss_pred CccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCCCCCCCccccccCCcccccccCCCc
Q 001052 686 DEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSFHPNTERCFRKGDVDICFQSGQCD 765 (1172)
Q Consensus 686 d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~~~~~~~~~~~Gd~e~af~~~~a~ 765 (1172)
|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|+++++........+.+||++++| ++|+
T Consensus 82 ~~~~la~~~Vry~GqpVa~VvA~t~~~A~~Aa~~v~V~ye~lp~v~~~~~a~~~~~~~~~~~~~~~~Gd~~~a~--a~A~ 159 (777)
T 2w3s_B 82 PEPVLATGEVHFVGQPIFLVAATSHRAARIAARKARITYAPRPAILTLDQALAADSRFEGGPVIWARGDVETAL--AGAA 159 (777)
T ss_dssp CCCSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEEEECCCCCSHHHHHHHTCBSSSSCEEEEESCHHHHH--HTCS
T ss_pred CcccccCceEEecCCeEEEEEECCHHHHHHHhcceEEEEEcCCCCCCHHHHhhccCccccCccccccCChhHHh--hcCC
Confidence 99999999999999999999999999999999999999999999999999998754211123456789999999 9999
Q ss_pred EEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCccEEEEeCccCCCCCCCCCcchH
Q 001052 766 KIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAF 845 (1172)
Q Consensus 766 ~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGgFG~K~~~~~~ 845 (1172)
++||++|++++|+|+||||++|+|+|+ +++ |+||+|||+|+.+|..+|++||||++||||+++++|||||+|.+...+
T Consensus 160 ~vve~~y~~~~~~h~~mEp~~~~A~~~-~~~-l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGgFG~K~~~~~~ 237 (777)
T 2w3s_B 160 HLAEGCFEIGGQEHFYLEGQAALALPA-EGG-VVIHCSSQHPSEIQHKVAHALGLAFHDVRVEMRRMGGGFGGKESQGNH 237 (777)
T ss_dssp EEEEEEEEECCCCCCCSSCCEEEEEEE-TTE-EEEEESCSCHHHHHHHHHHHHTCCGGGEEEEECCCSCCTTTTTTTTHH
T ss_pred eEEEEEEEECCccccCCcCCeEEEEEE-CCc-cEEEECCcCHHHHHHHHHHHHCCCHHHEEEEeCCCCCCCCcCccccch
Confidence 999999999999999999999999998 566 999999999999999999999999999999999999999999876566
Q ss_pred HHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCCchHHHHHHHhhccCC
Q 001052 846 IAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAVLERAMFHSDN 925 (1172)
Q Consensus 846 ~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v~~~~~~~~~~ 925 (1172)
+++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.+++..++.+.+.++.+
T Consensus 238 ~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Ga~~~~~~~v~~~~~~~~~~ 317 (777)
T 2w3s_B 238 LAIACAVAARATGRPCKMRYDRDDDMVITGKRHDFRIRYRIGADASGKLLGADFVHLARCGWSADLSLPVCDRAMLHADG 317 (777)
T ss_dssp HHHHHHHHHHHHSSCEEEECCHHHHHHHSCCCCCEEEEEEEEECTTSCEEEEEEEEEEECCSSCTTHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCceEEEEEEEECCCCCEEEEEEEEEEcCCcccccchhHHHHHHHhcCC
Confidence 78999999999999999999999999999999999999999999999999999999999999998888888888888899
Q ss_pred CCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCC------------------
Q 001052 926 VYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE------------------ 987 (1172)
Q Consensus 926 ~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~------------------ 987 (1172)
+|+|||++++++.|+||+++++||||||.+|++|++|++|||+|++|||||+|||++|++++
T Consensus 318 ~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~~~~~~~~~~~~~~~~~~~ 397 (777)
T 2w3s_B 318 SYFVPALRIESHRLRTNTQSNTAFRGFGGPQGALGMERAIEHLARGMGRDPAELRALNFYDPPERGGLSAPPSPPEPIAT 397 (777)
T ss_dssp TBCCSSEEEEEEEECCSSCCCCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHTTBCCCC-----------------
T ss_pred ccccCCEEEEEEEEeCCCCCCCccCCCChHHHHHHHHHHHHHHHHHhCcCHHHHHHHhccCcccccccccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999998
Q ss_pred C--CcccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCCcceeeeEEeeeecccccccccccccceEEEEeeCC
Q 001052 988 G--SILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDG 1065 (1172)
Q Consensus 988 g--~~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~~~~a~V~v~~DG 1065 (1172)
| +.+++|+.++++++.+||++++++++|++|+++.+.||..++|++||+|+++..||.++.....++++|.|+|++||
T Consensus 398 ~~p~~~~~g~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~rGiG~a~~~~g~~~~~~~~~~~~a~v~l~~DG 477 (777)
T 2w3s_B 398 KKTQTTHYGQEVADCVLGELVTRLQKSANFTTRRAEIAAWNSTNRTLARGIALSPVKFGISFTLTHLNQAGALVQIYTDG 477 (777)
T ss_dssp CCCCBCTTCCBCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHTCSSEEEEEEEEEEEEECSCSSGGGCEEEEEEEECTTS
T ss_pred CCCccCCCCccccCCCHHHHHHHHHHhcCHHHHHHHHHHhhcCCCCeeEEEEEEEeeEccccccccCCCCceEEEEccCC
Confidence 7 88999999999999999999999999999998888898888888899999999999887544456788999999999
Q ss_pred eEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHHhHHHHHHHHHHHHHHHHHHHHh
Q 001052 1066 TVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASK 1145 (1172)
Q Consensus 1066 sV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~A~~~Lr~rL~~~aa~ 1145 (1172)
+|+|.+|++|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|+++|.||++||++||+||+++|++
T Consensus 478 ~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~ 557 (777)
T 2w3s_B 478 SVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMAVKDACETLRGRLAGFVAA 557 (777)
T ss_dssp CEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CC-------------------CCCHHHHHHHHh-ccccceeEE
Q 001052 1146 HN-------------------FNSFAEKIIMFC-NILSSQVHV 1168 (1172)
Q Consensus 1146 ~~-------------------~~~w~~~i~~~~-~~~~~~~~~ 1168 (1172)
++ ..+|.|++..+| +.+++..++
T Consensus 558 ~~~~~~~~l~~~~g~v~~~~~~~~~~el~~~~~~~~~~l~~~~ 600 (777)
T 2w3s_B 558 REGCAARDVIFDAGQVQASGKSWRFAEIVAAAYMARISLSATG 600 (777)
T ss_dssp HHTSCGGGCEEETTEEEETTEEEEHHHHHHHHHHTTCCCEEEE
T ss_pred HhCCCHHHEEEECCEEEECCCcccHHHHHHHhhhcCcceEEEE
Confidence 64 368999999875 334444433
No 7
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=100.00 E-value=5.1e-115 Score=1094.40 Aligned_cols=544 Identities=23% Similarity=0.291 Sum_probs=497.6
Q ss_pred CCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCCCCC
Q 001052 602 KHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIG 681 (1172)
Q Consensus 602 ~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~ 681 (1172)
+++++||++++|+|+..||||+++|++|+.+ |||||+++||||++||||++||+++|+++|||++|+|++|+|+ |. +
T Consensus 6 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~-~gmL~a~~vrSp~aharI~siD~s~A~~~pGV~~V~t~~Dip~-~~-g 82 (769)
T 1rm6_A 6 PQHGTVGVRTPLVDGVEKVTGKAKYTADIAA-PDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPV-PF-G 82 (769)
T ss_dssp ---CCTTSCCCCTTHHHHHHTCCCBGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEGGGCCS-CB-C
T ss_pred cccCcCCCCCcCcchHHhccceeeehhccCC-CCCEEEEEEECCCCCeEEEeeehhHHhcCCCeEEEEehHHcCC-cc-C
Confidence 4567899999999999999999999999987 7999999999999999999999999999999999999999998 54 5
Q ss_pred CC--CCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCCC--CCC------Cccccc
Q 001052 682 PV--VADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HPN------TERCFR 751 (1172)
Q Consensus 682 ~~--~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~--~~~------~~~~~~ 751 (1172)
.. ..|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|++++++ |+. ....+.
T Consensus 83 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~A~~~v~Veye~lp~v~~~~~al~~~a~~~~~~~~~n~~~~~~~~ 162 (769)
T 1rm6_A 83 VLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAE 162 (769)
T ss_dssp SSTTCCCBCSSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCCCSHHHHHSTTCCCSSTTCTTSEEEEEEEE
T ss_pred CCCCCCCcccccCCEEEEcCCeEEEEEECCHHHHHHHhCCCeEEEeeCCCCCCHHHHhccCCceeccCCCCccccccccc
Confidence 43 56889999999999999999999999999999999999999999999999999998873 431 113457
Q ss_pred cCCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCccEEEEeCc
Q 001052 752 KGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKR 831 (1172)
Q Consensus 752 ~Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~ 831 (1172)
+||++++| ++|+++||++|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..+|++||||++||||++++
T Consensus 163 ~Gd~~~a~--a~A~~vve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lglp~~~VrV~~~~ 240 (769)
T 1rm6_A 163 FGDVAAAF--AEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPF 240 (769)
T ss_dssp ESCHHHHH--HTCSEEEEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEECCB
T ss_pred cCChhhhh--ccCCEEEEEEEEECCccccCCCCceEEEEEeCCCCeEEEEECCcCHHHHHHHHHHHhCCCHHHEEEEeCC
Confidence 89999999 9999999999999999999999999999998436899999999999999999999999999999999999
Q ss_pred cCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCCc
Q 001052 832 IGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDL 911 (1172)
Q Consensus 832 vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~~ 911 (1172)
+|||||+|..... +++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.++
T Consensus 241 vGGgFG~K~~~~~-~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~~ 319 (769)
T 1rm6_A 241 LGGGFGARTEALH-FEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGY 319 (769)
T ss_dssp CCCCTTTTSSCCH-HHHHHHHHHHHHTSEEEEECCHHHHHHHCCCBCEEEEEEEEEECTTSCEEEEEEEEEEECCSSCTT
T ss_pred CCCCCCCcccccc-HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCCEEEEEEEEECCCCeEEEEEEEEEEeCCcCccc
Confidence 9999999987542 578899999999999999999999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCc-
Q 001052 912 SLAVLERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSI- 990 (1172)
Q Consensus 912 s~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~g~~- 990 (1172)
+..++.+++.++.++|+|||++++++.|+||++|++||||||.+|++|++|++||++|++|||||+|||++|++++++.
T Consensus 320 ~~~v~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~ 399 (769)
T 1rm6_A 320 GIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYV 399 (769)
T ss_dssp HHHHHHHHHHTTSSSBCCSCEEEEEEEECCSSSCCCCCSSTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHHTBCSSSSEE
T ss_pred chHHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCccccCCChHHHHHHHHHHHHHHHHHHCcCHHHHHHHhCCCCCCCc
Confidence 8888777778889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCCcceeeeEEeeeeccccccc----ccccccceEEEEeeCCe
Q 001052 991 LHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNRWKKRGIAMVPTKFGISFTL----KLMNQAGALVHVYTDGT 1066 (1172)
Q Consensus 991 ~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~----~~~~~~~a~V~v~~DGs 1066 (1172)
+++|+.++++++++||++++++++|++|+++. .+| ||+|+++..++.+++. ...++++|.|+|++||+
T Consensus 400 ~~~g~~~~s~~~~~~l~~~~~~~~w~~r~~~~------~~g--rG~Gia~~~~~~g~~~~~~~~~~~~~~a~v~l~~dG~ 471 (769)
T 1rm6_A 400 TMYAQRVMSYGVPECLEKVKAASGWEERKGKL------PKG--RGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGG 471 (769)
T ss_dssp CTTCCEECCCCHHHHHHHHHHHHTHHHHTTCS------CTT--EEEEEEEEEEESSCSSCSSCCCCCSEEEEEEECTTCC
T ss_pred CCCCccccCCCHHHHHHHHHHhCCchhhhhhh------ccC--ceEEEEEEEEecccCccccccCCCCccEEEEEeCCCe
Confidence 99999999999999999999999998765432 123 5555555555555432 12356889999999999
Q ss_pred EEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHHhHHHHHHHHHHHHHHHHHHHHhC
Q 001052 1067 VLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACEQIKARMEPIASKH 1146 (1172)
Q Consensus 1067 V~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~A~~~Lr~rL~~~aa~~ 1146 (1172)
|+|.+|++|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|++.|.||++||++||+||+++|+++
T Consensus 472 v~v~~g~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~~ 551 (769)
T 1rm6_A 472 ITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKK 551 (769)
T ss_dssp EEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred C----------------------CCCHHHHHHHHh
Q 001052 1147 N----------------------FNSFAEKIIMFC 1159 (1172)
Q Consensus 1147 ~----------------------~~~w~~~i~~~~ 1159 (1172)
. ..+|.|++..+|
T Consensus 552 l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~ 586 (769)
T 1rm6_A 552 LDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAM 586 (769)
T ss_dssp TTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHH
T ss_pred hCCCHHHeEEeCCEEEEccCCCCccCHHHHHHhhh
Confidence 2 258999999875
No 8
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=100.00 E-value=1.8e-113 Score=1082.89 Aligned_cols=544 Identities=24% Similarity=0.303 Sum_probs=491.5
Q ss_pred ccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCC-CCCCCC
Q 001052 606 SVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDN-RIGPVV 684 (1172)
Q Consensus 606 ~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n-~~~~~~ 684 (1172)
.|||+++|+|+..||||+++|++|+.+ |||||+++||||++||||++||+++|+++|||++|+|++|+|+.| .++...
T Consensus 13 ~iG~~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~~vrSp~aharI~sID~s~A~~~pGV~~V~t~~D~p~~~~~~~~~~ 91 (788)
T 1t3q_B 13 SIGTSVLRREDTRLLTGRGRYIADLVL-SGMLHVASLRSPFAHARIVSIDVADAQALPGVELVWCGADVAELSQGIVATM 91 (788)
T ss_dssp STTSCCCCTTHHHHHTTCCCBGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEEEHHHHHTTCCCEEECC
T ss_pred cCCCCCcCcchHHhCccceecccccCC-CCCEEEEEEecCCCCEEEEEeEhHHHhhCCCeEEEEeHHHCcccccccCccc
Confidence 699999999999999999999999987 799999999999999999999999999999999999999999764 222211
Q ss_pred C-----C--ccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCC-CCCC------Ccccc
Q 001052 685 A-----D--EELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS-FHPN------TERCF 750 (1172)
Q Consensus 685 ~-----d--~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a-~~~~------~~~~~ 750 (1172)
. + .++|++++|||+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|+++++ +|+. ....+
T Consensus 92 ~~~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Veye~lp~v~~~~~Al~~~a~i~~~~~~n~~~~~~~ 171 (788)
T 1t3q_B 92 QVEGFQTTIQPLLANGVTRFVGEIVAVVVASSRAIAEDAAQLIQVEYEELPAVTGIEAALEGEARANDTLAGNVVSRTSR 171 (788)
T ss_dssp SSTTCCCEEECSSCCSEECSTTCEEEEEEESSHHHHHHHHTTCEEEEEECCCCCSHHHHHHCSCCSCTTSSSSEEEEEEE
T ss_pred ccccccCCccccccCCeEEEcCCeEEEEEECCHHHHHHHhCCCeEEEeeCCCcCCHHHHhhccCcccCCCCCcccccccc
Confidence 1 3 3679999999999999999999999999999999999999999999999999876 3431 11245
Q ss_pred ccCCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCccEEEEeC
Q 001052 751 RKGDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTK 830 (1172)
Q Consensus 751 ~~Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~ 830 (1172)
.+||++++| ++|+++||++|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..+|++||||++||||+++
T Consensus 172 ~~Gd~~~af--a~A~~vve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~Lglp~~~VrV~~~ 249 (788)
T 1t3q_B 172 ARDELAPIF--ASSAGVVRGQFSCGRVSACPMETRGAVAQYEWTTQQLILWTATQMPSFVRTMVAMFCAIPEHLIEVRVP 249 (788)
T ss_dssp EECCCHHHH--HHSSEEEEEEEEECBBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred ccCChhhhh--ccCCcEEEEEEEECCEeccCCCCceEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCChHHEEEEeC
Confidence 789999999 999999999999999999999999999999843689999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCC
Q 001052 831 RIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLD 910 (1172)
Q Consensus 831 ~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~ 910 (1172)
++|||||+|..... .++.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++++.|+|+|.+
T Consensus 250 ~vGGgFG~K~~~~~-~~~~aA~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~d~Gay~~ 328 (788)
T 1t3q_B 250 DVGGGFGQKAHLHP-EELLVCLLSRALGRPVRWIEDRQENFLGATHAKQQRNEMGLAFDGDGRFLALENRSITDGGAYNN 328 (788)
T ss_dssp BCSCCTTTTSSCCH-HHHHHHHHHHHHTSCEEEECCHHHHHHHSCBBCCEEEEEEEEECTTCCEEEEEEEEEEECCSSCC
T ss_pred CCCCCCCCCCccch-HHHHHHHHHHHhCCCEEEEecHHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEcCCCCcc
Confidence 99999999987543 37899999999999999999999999999999999999999999999999999999999999987
Q ss_pred --chHHHHH-HHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCC
Q 001052 911 --LSLAVLE-RAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGE 987 (1172)
Q Consensus 911 --~s~~v~~-~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~ 987 (1172)
++..++. ++..++.++|+|||++++++.|+||++|++||||||.+|++|++|++||++|++|||||+|||++|++++
T Consensus 329 ~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~Tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lG~DP~e~R~~N~~~~ 408 (788)
T 1t3q_B 329 LPWTQLVESHVGNAVILGVYKVPAVSEESIAVATNKCPIGAYRGVGFTAGQIARETLIDRAARQLGLSPFEIRRRNVVMP 408 (788)
T ss_dssp TTTCGGGTHHHHHHTTTTTBCCSEEEEEEEEECCSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHHTCCHHHHHHTTBCCG
T ss_pred ccccchhHHHHHHHhcCCCcCCCcEEEEEEEEECCCCCCCcccCCcHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhcCCC
Confidence 7776666 6677889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC---cccccccccCCCHHHHHHHHHhhcChH---hhHHHHhhcccCCCcceeeeEEeeeeccccccccccc--------
Q 001052 988 GS---ILHYGQQLQHCTLFPLWNELKLSCDFL---NARKEVDNFNLNNRWKKRGIAMVPTKFGISFTLKLMN-------- 1053 (1172)
Q Consensus 988 g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~---~r~~~~~~~~~~~~~~grGia~~~~~~g~~~~~~~~~-------- 1053 (1172)
++ .+++|+.++++++++||++++++++|+ +|+++.+ ..++|||+|+++.....| ++..+.+
T Consensus 409 ~~~p~~~~~g~~~~s~~~~~~l~~~~~~~~w~~~~~r~~~~~---~~g~~~G~GiA~~~~~~g--~~~~~~~~~~~~~~~ 483 (788)
T 1t3q_B 409 EDFPFTNRLGQTHREGTYLQTINLLEEMVNPEAFRQRQAEAR---ARGKYLGLGVSVFNEVTG--TGTRTLSFLGTPTTT 483 (788)
T ss_dssp GGCSEECTTSCEECSCCHHHHHHHHHHHHCHHHHHHHHHHHH---TTTEEEEEEEEEEEEEES--CCHHHHHHTTCCCCC
T ss_pred CCccccCCCCcccCCCCHHHHHHHHHHhcCCchhhhhhhhhh---ccCCeEEEEEEEEEeccc--cCcccccccccccCc
Confidence 87 788999888999999999999999998 5554443 356677777766544333 2211112
Q ss_pred ccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHHhHHHHHHHHH
Q 001052 1054 QAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDIYGAAVLDACE 1133 (1172)
Q Consensus 1054 ~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~~g~Av~~A~~ 1133 (1172)
+++|.|+|++||+|+|.+|++|||||++|+++||+|++||||+|+|+|..+||+ +|++++|+|||+|++.|.||++||+
T Consensus 484 ~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~-~p~~~~t~aSr~t~~~G~Av~~Aa~ 562 (788)
T 1t3q_B 484 HDSATVRIDPTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTK-NTYGFGAYASRGAVIGAGSIGRAAS 562 (788)
T ss_dssp CBEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTT-SCCBCCSCTTCHHHHHHHHHHHHHH
T ss_pred cccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCC-CCCCCCCccchHHHHHHHHHHHHHH
Confidence 577999999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCC----------------------CCHHHHHHHHh
Q 001052 1134 QIKARMEPIASKHNF----------------------NSFAEKIIMFC 1159 (1172)
Q Consensus 1134 ~Lr~rL~~~aa~~~~----------------------~~w~~~i~~~~ 1159 (1172)
+||+||+++|+++.+ .+|.|++..+|
T Consensus 563 ~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~ 610 (788)
T 1t3q_B 563 IVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAY 610 (788)
T ss_dssp HHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHhHhhhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHh
Confidence 999999999986422 68999998875
No 9
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=100.00 E-value=1.2e-113 Score=1085.03 Aligned_cols=551 Identities=22% Similarity=0.277 Sum_probs=496.7
Q ss_pred CCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCCCCCC-
Q 001052 604 GTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIGP- 682 (1172)
Q Consensus 604 ~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~~- 682 (1172)
++.|||+++|+|+..||||+++|++|+.+ |||||+++||||++||||++||+++|+++|||++|+|++|+|+.+ .+.
T Consensus 15 ~~~iG~~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~~vrSp~aharI~sID~s~A~~~PGV~~V~t~~D~p~~~-~~~~ 92 (803)
T 1ffv_B 15 LAGMGASRLRKEDARFIQGKGNYVDDIKM-PGMLHMDIVRAPIAHGRIKKIHKDAALAMPGVHAVLTAEDLKPLK-LHWM 92 (803)
T ss_dssp HTCTTCCCCCSSHHHHTTTCCCCGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHHSTTEEEEECHHHHGGGT-CSEE
T ss_pred hccCCCCCcCcChHhhcccceecccccCC-CCCEEEEEEeCCCCCeEEEEeehHHHhcCCCeEEEEehhhccCcc-cccc
Confidence 35699999999999999999999999988 799999999999999999999999999999999999999998642 121
Q ss_pred ---CCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCC--CCCC--C---------
Q 001052 683 ---VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN--T--------- 746 (1172)
Q Consensus 683 ---~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~--~--------- 746 (1172)
...++++|++++|+|+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|+++++ +|+. .
T Consensus 93 ~~~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Veye~lp~v~~~~~Al~~~a~~i~~~~~~~~~~~~~~~ 172 (803)
T 1ffv_B 93 PTLAGDVAAVLADEKVHFQMQEVAIVIADDRYIAADAVEAVKVEYDELPVVIDPIDALKPDAPVLREDLAGKTSGAHGPR 172 (803)
T ss_dssp ECTTSCEEESSCCSEECSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCCCCHHHHTSTTCCCSCGGGTTCCEETTEEC
T ss_pred cccCCCccccccCceEEEcCCcEEEEEECCHHHHHHHhcCCEEEEeeCCccCCHHHHhhcCCceeccccccccccccccc
Confidence 12367899999999999999999999999999999999999999999999999998876 3431 0
Q ss_pred -------cccccc-CCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHh
Q 001052 747 -------ERCFRK-GDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVL 818 (1172)
Q Consensus 747 -------~~~~~~-Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~L 818 (1172)
...+.+ ||++++| ++|+++||++|++|+|+|+||||++|+|+|++++|+|+||+|||+|+.+|..+|++|
T Consensus 173 ~~~n~~~~~~~~~~Gd~~~af--a~A~~vve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~lA~~L 250 (803)
T 1ffv_B 173 EHHNHIFTWGAGDKAATDAVF--ANAPVTVSQHMYYPRVHPCPLETCGCVASFDPIKGDLTTYITSQAPHVVRTVVSMLS 250 (803)
T ss_dssp SSTTEEEEEEEECHHHHHHHH--HHCSEEEEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSCHHHHHHHHHHHH
T ss_pred ccccccccccccccCChhhhh--ccCCEEEEEEEEECCEeccCCCCceEEEEEeCCCceEEEEECCCCHHHHHHHHHHHh
Confidence 112467 9999999 999999999999999999999999999999843689999999999999999999999
Q ss_pred CCCCccEEEEeCccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEE
Q 001052 819 GLPMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALD 898 (1172)
Q Consensus 819 glp~~kV~V~~~~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~ 898 (1172)
|||++||||+++++|||||+|.... ...+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++
T Consensus 251 glp~~~VrV~~~~vGGgFG~K~~~~-~~~~~aa~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~ 329 (803)
T 1ffv_B 251 GIPESKVRIVSPDIGGGFGNKVGIY-PGYVCAIVASIVLGRPVKWVEDRVENISTTAFARDYHMDGELAATPDGKILGLR 329 (803)
T ss_dssp CCCGGGEEEECCCCSCCTTTTSSCC-HHHHHHHHHHHHHTSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEE
T ss_pred CCCHHHEEEEeCCCCCCCCcccccc-HHHHHHHHHHHHhCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCCEEEEE
Confidence 9999999999999999999998753 335789999999999999999999999999999999999999999999999999
Q ss_pred EeEEecCCCCCC-chHHHHHHH-hhccCCCCCCCeEEEEEEEEecCCCCCC-ccCCCCh-hhhHHHHHHHHHHHHHHcCC
Q 001052 899 LEIYNNAGNSLD-LSLAVLERA-MFHSDNVYEIPNVRIMGNVCFTNFPSNT-AFRGFGG-PQGMLITENWIQRVAVEVRK 974 (1172)
Q Consensus 899 ~~~~~d~Ga~~~-~s~~v~~~~-~~~~~~~Y~ipn~~~~~~~v~TN~~~~g-a~RG~G~-~q~~fa~Es~mDelA~~lg~ 974 (1172)
++++.|+|+|.+ ++..+..+. ...+.++|+|||++++++.|+||++|++ ||||||. +|++|++|++||++|++|||
T Consensus 330 ~~~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~p~g~a~Rg~G~~~q~~fa~E~~mDelA~~lG~ 409 (803)
T 1ffv_B 330 VNVVADHGAFDACADPTKFPAGLFHICSGSYDIPRAHCSVKGVYTNKAPGGVAYXXSFRVTEAVYLIERMVDVLAQKLNM 409 (803)
T ss_dssp EEEEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSEEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEecCCcccccccchhHHHHHHhhcCCCccCCcEEEEEEEEEcCCCCCccceeccCCCchhHHHHHHHHHHHHHHHCc
Confidence 999999999965 665544422 2335889999999999999999999999 9999999 99999999999999999999
Q ss_pred CHHHHHHHhcCCCCC---cccccccccCCCHHHHHHHHHhhcChHhhHHHHhhcccCCC-cceeeeEEeeeecccccccc
Q 001052 975 SPEEIREINFQGEGS---ILHYGQQLQHCTLFPLWNELKLSCDFLNARKEVDNFNLNNR-WKKRGIAMVPTKFGISFTLK 1050 (1172)
Q Consensus 975 DP~e~R~~Nl~~~g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~~~~~~~~~-~~grGia~~~~~~g~~~~~~ 1050 (1172)
||+|||++|++++++ .+++|+.++++++++||++++++++|++++++.+++|+.++ |++||+|++...++.+++..
T Consensus 410 DP~e~R~~N~~~~~~~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~g~~~~~rGiG~a~~~~~~g~~~~ 489 (803)
T 1ffv_B 410 DKAEIRAKNFIRKEQFPYTTQFGFEYDSGDYHTALKKVLDAVDYPALRAEQAARRADPNSPTLMGIGLVTFTEVVGAGPS 489 (803)
T ss_dssp CTTHHHHHHBCCGGGCSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCSEEEEEEEEEEECCBCCCCT
T ss_pred CHHHHHHHhCCCCCcCccccCCCcccCCccHHHHHHHHHHHCCchhHHHHhHhhhccCCCcceEEEEEEEEEEecccccc
Confidence 999999999998765 67889988999999999999999999987777777887787 46788888777766654321
Q ss_pred ----cc---cccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhHH
Q 001052 1051 ----LM---NQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSDI 1123 (1172)
Q Consensus 1051 ----~~---~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~~ 1123 (1172)
.+ ++++|.|+|++||+|+|.+|++|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|++
T Consensus 490 ~~~~~~~~~~~~~a~v~l~~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~ 569 (803)
T 1ffv_B 490 KMCDILGVGMFDSCEIRIHPTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPV 569 (803)
T ss_dssp TTCEETTEESCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHHH
T ss_pred ccccccccCCcccEEEEEecCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHHHH
Confidence 11 15789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCC----------------------CCCHHHHHHHHh
Q 001052 1124 YGAAVLDACEQIKARMEPIASKHN----------------------FNSFAEKIIMFC 1159 (1172)
Q Consensus 1124 ~g~Av~~A~~~Lr~rL~~~aa~~~----------------------~~~w~~~i~~~~ 1159 (1172)
.|.||++||++||+||+++|+++. ..+|.|++..+|
T Consensus 570 ~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~a~ 627 (803)
T 1ffv_B 570 AGAAIALAARKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAY 627 (803)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEcCCCCCccCHHHHHHHHH
Confidence 999999999999999999998742 257999998875
No 10
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=100.00 E-value=2.5e-113 Score=1084.25 Aligned_cols=551 Identities=23% Similarity=0.280 Sum_probs=492.4
Q ss_pred CccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCCC-CCC-
Q 001052 605 TSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNR-IGP- 682 (1172)
Q Consensus 605 ~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~-~~~- 682 (1172)
..||++++|+|+..||||+++|++|+.+ |||||+++||||++||||++||+++|+++|||++|+|++|+|+.|. ++.
T Consensus 19 ~~iG~~~~R~d~~~kvtG~a~Y~~D~~~-pgmL~a~~vrSp~aha~I~sID~s~A~~~PGV~~V~t~~D~p~~~~~~~~~ 97 (809)
T 1n62_B 19 QGMGCKRKRVEDIRFTQGKGNYVDDVKL-PGMLFGDFVRSSHAHARIKSIDTSKAKALPGVFAVLTAADLKPLNLHYMPT 97 (809)
T ss_dssp TCTTCCCCCTHHHHHTTTCCCBGGGCCC-TTCEEEEEEECSCSSEEEEEEECHHHHHSTTEEEEEEHHHHGGGTCSEEEC
T ss_pred ccCCCCCcCcchHHhccceeeehhhcCC-CCCEEEEEEeCCCCceEEEecchHHHhhCCCeEEEEEhHHccccccccccc
Confidence 4599999999999999999999999988 7999999999999999999999999999999999999999997651 111
Q ss_pred -CCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCC--CCCC--C-----------
Q 001052 683 -VVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKS--FHPN--T----------- 746 (1172)
Q Consensus 683 -~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a--~~~~--~----------- 746 (1172)
...++|+|++++|+|+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|+++++ +|+. .
T Consensus 98 ~~~~~~~~la~~~Vry~Gq~VA~VvA~t~~~A~~Aa~~v~Veye~lp~v~~~~~Al~~~a~~i~~~~~~~~~~~~~~~~~ 177 (809)
T 1n62_B 98 LAGDVQAVLADEKVLFQNQEVAFVVAKDRYVAADAIELVEVDYEPLPVLVDPFKAMEPDAPLLREDIKDKMTGAHGARKH 177 (809)
T ss_dssp TTSSEEESSCSSEECSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCCCCGGGTTSTTCCCCCGGGTTCCEETTEECSS
T ss_pred cCCCCcccccCceEEEcCCcEEEEEECCHHHHHHHhCcceEEEEeCCCcCCHHHHhhcCCceeccccccccccccccccc
Confidence 12467899999999999999999999999999999999999999999999999998876 3431 0
Q ss_pred -----cccccc-CCcccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCC
Q 001052 747 -----ERCFRK-GDVDICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGL 820 (1172)
Q Consensus 747 -----~~~~~~-Gd~e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lgl 820 (1172)
...+.+ ||++++| ++|+++||++|++++|+|+||||++|+|+|++++|+|+||+|||+|+.+|..+|++|||
T Consensus 178 ~n~~~~~~~~~~Gd~~~af--a~A~~vve~~y~~~~~~h~~mEp~~~~A~~~~~~g~l~v~~stQ~p~~~r~~~A~~Lgl 255 (809)
T 1n62_B 178 HNHIFRWEIGDKEGTDATF--AKAEVVSKDMFTYHRVHPSPLETCQCVASMDKIKGELTLWGTFQAPHVIRTVVSLISGL 255 (809)
T ss_dssp TTEEEEEEEECHHHHHHHH--HHCSEEEEEEEEECCBCCCCSSCCEEEEEEETTTTEEEEEECCSSHHHHHHHHHHHHCC
T ss_pred ccccccccccccCChhhhh--ccCCEEEEEEEEECCEeccCCCCceEEEEEeCCCCeEEEEECCcChHHHHHHHHHHhCC
Confidence 122467 9999999 99999999999999999999999999999984468999999999999999999999999
Q ss_pred CCccEEEEeCccCCCCCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEEEe
Q 001052 821 PMSKVVCKTKRIGGGFGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLE 900 (1172)
Q Consensus 821 p~~kV~V~~~~vGGgFG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~ 900 (1172)
|++||||+++++|||||+|.... ...+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+|++++
T Consensus 256 p~~~VrV~~~~vGGgFG~K~~~~-~~~~~aA~~A~~~grPVkl~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~ 334 (809)
T 1n62_B 256 PEHKIHVIAPDIGGGFGNKVGAY-SGYVCAVVASIVLGVPVKWVEDRMENLSTTSFARDYHMTTELAATKDGKILAMRCH 334 (809)
T ss_dssp CGGGEEEECCBCSCCTTTTSSCC-HHHHHHHHHHHHHSSCEEEECCHHHHHHHSCEECCEEEEEEEEECTTCCEEEEEEE
T ss_pred CHHHEEEEeCCCCCCCccccccc-hHHHHHHHHHHHhCCCEEEEechHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEE
Confidence 99999999999999999998753 33578999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCC-chHHHHHHH-hhccCCCCCCCeEEEEEEEEecCCCCCC-ccCCCCh-hhhHHHHHHHHHHHHHHcCCCH
Q 001052 901 IYNNAGNSLD-LSLAVLERA-MFHSDNVYEIPNVRIMGNVCFTNFPSNT-AFRGFGG-PQGMLITENWIQRVAVEVRKSP 976 (1172)
Q Consensus 901 ~~~d~Ga~~~-~s~~v~~~~-~~~~~~~Y~ipn~~~~~~~v~TN~~~~g-a~RG~G~-~q~~fa~Es~mDelA~~lg~DP 976 (1172)
++.|+|+|.+ ++..+..+. ...+.++|+|||++++++.|+||++|++ ||||||. +|++|++|++||++|++|||||
T Consensus 335 ~~~d~Gay~~~~~~~v~~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~g~a~Rg~G~~~q~~fa~E~~mDelA~~lG~DP 414 (809)
T 1n62_B 335 VLADHGAFDACADPSKWPAGFMNICTGSYDMPVAHLAVDGVYTNKASGGVAYRCSFRVTEAVYAIERAIETLAQRLEMDS 414 (809)
T ss_dssp EEEECCSSCCCCCCTTCTTTTGGGTTTTBCCSCEEEEEEEECCSSCCEESCSSCTTTHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred EEEeCCcCcccccchhhhhhhhhhcCCCcCCCcEEEEEEEEECCCCCCCCEecCCCccHHHHHHHHHHHHHHHHHHCcCH
Confidence 9999999965 665554433 2335889999999999999999999999 9999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCCC---cccccccccCCCHHHHHHHHHhhcChHhhHHHH----hhcccCCCcceeeeEEeeeeccccccc
Q 001052 977 EEIREINFQGEGS---ILHYGQQLQHCTLFPLWNELKLSCDFLNARKEV----DNFNLNNRWKKRGIAMVPTKFGISFTL 1049 (1172)
Q Consensus 977 ~e~R~~Nl~~~g~---~~~~g~~~~~~~l~~~l~~~~~~~~~~~r~~~~----~~~~~~~~~~grGia~~~~~~g~~~~~ 1049 (1172)
+|||++|++++++ .+++|+.++++++++||++++++++|++++++. +.||.+.+|++||+|++...++.+++.
T Consensus 415 ~e~R~~N~~~~~~~p~~~~~g~~~~~~~~~~~l~~~~~~~~w~~~~~~~~~~~~~fn~g~~~~~rGiGia~~~~~~g~~~ 494 (809)
T 1n62_B 415 ADLRIKNFIQPEQFPYMAPLGWEYDSGNYPLAMKKAMDTVGYHQLRAEQKAKQEAFKRGETREIMGIGISFFTEIVGAGP 494 (809)
T ss_dssp HHHHHHHBCCGGGCSEECTTSCEECCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCSEEEEEEEEEEECCBSCCC
T ss_pred HHHHHHhccCCCCCccccCCCcccCCCCHHHHHHHHHHHcCchhhHHhHHhhhhhhccCCCceeEEEEEEEEEEeecccc
Confidence 9999999998765 678899889999999999999999998643322 246654446677877776666655432
Q ss_pred c----cc---cccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchhH
Q 001052 1050 K----LM---NQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASSD 1122 (1172)
Q Consensus 1050 ~----~~---~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t~ 1122 (1172)
. .+ ++++|.|+|++||+|+|.+|++|||||++|+++||+|++||||+|+|+|..+||+.+|++++|+|||+|+
T Consensus 495 ~~~~~~~~~~~~~~a~v~l~~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~ 574 (809)
T 1n62_B 495 SKNCDILGVSMFDSAEIRIHPTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTP 574 (809)
T ss_dssp TTTCEETTEECCEEEEEEECTTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTT
T ss_pred cccccccccCCcccEEEEEecCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHH
Confidence 1 01 1578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHhCC----------------------CCCHHHHHHHHh
Q 001052 1123 IYGAAVLDACEQIKARMEPIASKHN----------------------FNSFAEKIIMFC 1159 (1172)
Q Consensus 1123 ~~g~Av~~A~~~Lr~rL~~~aa~~~----------------------~~~w~~~i~~~~ 1159 (1172)
+.|.||++||++||+||+++|+++. ..+|++++..+|
T Consensus 575 ~~G~Av~~Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~ 633 (809)
T 1n62_B 575 TAGAATAVAARKIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASY 633 (809)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHh
Confidence 9999999999999999999999742 268999998875
No 11
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=100.00 E-value=1.6e-103 Score=932.80 Aligned_cols=450 Identities=32% Similarity=0.510 Sum_probs=400.0
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCce
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMH 98 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~ 98 (1172)
|.|+|+|||+++++++++|+++||||||+.||||||.||++|.||||||+|.++|. ++++|||++|+.+++|++
T Consensus 1 ~~~~~~vNg~~~~~~~~~~~~~Ll~~Lr~~~l~g~k~gC~~G~CGaCtV~v~~~~~------g~~v~sCl~~~~~~~g~~ 74 (462)
T 2w3s_A 1 MEIAFLLNGETRRVRIEDPTQSLLEWLRAEGLTGTKEGCNEGDCGACTVMIRDAAG------SRAVNACLMMLPQIAGKA 74 (462)
T ss_dssp CEEEEEETTEEEEEECSCTTCBHHHHHHHTTCTTSCCSCSSSSSCTTEEEEEETTE------EEEEETTTCBGGGGTTCE
T ss_pred CcEEEEECCEEEEEecCCCCCcHHHHHHHcCCCccCCCCCCCCcCCcEEEEEecCC------CeEEEchhhhHHHhCCCc
Confidence 47999999999999449999999999995599999999999999999999944431 279999999999999999
Q ss_pred EEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHHH
Q 001052 99 VITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRVF 178 (1172)
Q Consensus 99 i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 178 (1172)
|+|||||++.++.+||||++|+++|++|||||||||||++++|| +| |++||+++|+|||||||||++|++|++.+
T Consensus 75 i~TiEgl~~~~~~~~~~q~a~~~~~~~QCG~CtpG~im~~~~ll----~p-~~~~i~~~l~gnlCRCtgy~~i~~a~~~~ 149 (462)
T 2w3s_A 75 LRTIEGIAAPDGRLHPVQQAMIDHHGSQCGFCTPGFIVSMAAAH----DR-DRKDYDDLLAGNLCRCTGYAPILRAAEAA 149 (462)
T ss_dssp EECGGGTSCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHH----HT-TCCCHHHHSTTCCCSSSCSHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCHHHHHHHHhCCCCCCCCcchHHHHHHHHH----CC-CHHHHHHHHcCCcccCCCcHHHHHHHHHH
Confidence 99999998435789999999999999999999999999999999 46 89999999999999999999999999998
Q ss_pred HhccccccccCCcccccCCccccCCCCCCCCCCCCCCCCCcccccccccCCccccccccccCCCCCCCCCcCCChhhhcc
Q 001052 179 AKTNDALYTNMSSMSLKEGEFVCPSTGKPCSCGMKNVSNADTCEKSVACGKTYEPVSYSEIDGSTYTEKELIFPPELLLR 258 (1172)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~p~~l~~~ 258 (1172)
+.... . + .|. + + +++ . +
T Consensus 150 ~~~~~------~----~-------------~~~------~-----------------~--~~~---~------~------ 166 (462)
T 2w3s_A 150 AGEPP------A----D-------------WLQ------A-----------------D--AAF---T------L------ 166 (462)
T ss_dssp HTSCC------C----H-------------HHH------H-----------------G--GGC---C-------------
T ss_pred hhccc------c----c-------------ccc------C-----------------c--ccc---c------c------
Confidence 73110 0 0 000 0 0 000 0 0
Q ss_pred CCCCccc--cCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEE
Q 001052 259 KSNPLNL--SGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEI 336 (1172)
Q Consensus 259 ~~~~~~~--~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~I 336 (1172)
.++.+ ++ ...+|++|+|++||++++++++++++++|||+|++++|.+...++.+|||++|+||+.|+.++++|+|
T Consensus 167 --~~~~~~~gG-~a~~y~~P~sl~ea~~ll~~~~~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~I 243 (462)
T 2w3s_A 167 --AQLSSGVRG-QTAPAFLPETSDALADWYLAHPEATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQIRETPDGYGI 243 (462)
T ss_dssp ---------------CCBCCSSHHHHHHHHHHCTTCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCEEEETTEEEE
T ss_pred --cceeEcCCC-CccEEEecCCHHHHHHHHhhCCCCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcEEEcCCEEEE
Confidence 11112 22 23589999999999999999999999999999999999999899999999999999999999999999
Q ss_pred cccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCC
Q 001052 337 GAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKG 416 (1172)
Q Consensus 337 GA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~~g 416 (1172)
||++|+++|+++++ +.+|.|+++++++||+||||+|||||||++++|.||++++|+||||+|+|.+.+|
T Consensus 244 GA~vtl~~l~~~l~-----------~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~sD~~~~L~ALdA~v~l~~~~G 312 (462)
T 2w3s_A 244 GAGVTIAALRAFAE-----------GPHPALAGLLRRFASEQVRQVATIGGNIANGSPIGDGPPALIAMGASLTLRRGQE 312 (462)
T ss_dssp ETTCBHHHHHHHHT-----------TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTCSHHHHHHHTTCEEEEEBTTB
T ss_pred ccCCcHHHHHHHHH-----------HHhHHHHHHHHHhCChhheeeEEcccccccCCCcchHHHHHHHcCCEEEEEeCCc
Confidence 99999999998742 2578999999999999999999999999999999999999999999999999998
Q ss_pred CeEEEehHhhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEc
Q 001052 417 NIRTTMAEEFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYG 496 (1172)
Q Consensus 417 ~~R~vpl~dF~~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~G 496 (1172)
+|++|++|||.||+++.|+++|||++|+||.+..+ +.+||+++|+++|||+||+|+.+++++ + +|+++||+||
T Consensus 313 -~R~vp~~dF~~g~~~t~L~~~Eii~~i~iP~~~~~--~~~~K~~~R~~~d~a~v~~A~~~~~~~-~---~i~~~ria~G 385 (462)
T 2w3s_A 313 -RRRMPLEDFFLEYRKQDRRPGEFVESVTLPKSAPG--LRCYKLSKRFDQDISAVCGCLNLTLKG-S---KIETARIAFG 385 (462)
T ss_dssp -CCCCBGGGGEEETTEESCCTTCEEEEEEEESCCSS--EEEEEECSSSSSCCCSEEEEEEEEEET-T---EEEEEEEEEE
T ss_pred -eEEEEHHHhhcccccccCCCCcEEEEEEEecCCCC--ceEEEEccccccchhheeEEEEEEEcC-C---eEEEEEEEEE
Confidence 99999999999999999999999999999998654 789999999999999999999999984 4 8999999999
Q ss_pred cCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhh
Q 001052 497 GVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSH 564 (1172)
Q Consensus 497 gv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~ 564 (1172)
|++++|+|+.++|++|.||.|+++++++|++.+.+++.|.++ +++|++||++|+.+|++|+|.++..
T Consensus 386 gva~~p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d-~rgs~~YR~~la~~l~~r~l~~~~~ 452 (462)
T 2w3s_A 386 GMAGVPKRAAAFEAALIGQDFREDTIAAALPLLAQDFTPLSD-MRASAAYRMNAAQAMALRYVRELSG 452 (462)
T ss_dssp SSSSSCEECHHHHHTTTTSBCSHHHHHHHGGGHHHHCCCCCB-TTBCHHHHHHHHHHHHHHHHHHTTT
T ss_pred cCCCcceEhHHHHHHhcCCCCCHHHHHHHHHHhhhccCCCCC-CCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999987665 5899999999999999999998864
No 12
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=7.2e-96 Score=863.57 Aligned_cols=406 Identities=31% Similarity=0.493 Sum_probs=384.7
Q ss_pred CCCCccCCcccccCccccccceeeccccCCCCCCcEEEEEEecCCCCeEeeccChhhhccCCCEEEEEecCCCCCCCCCC
Q 001052 602 KHGTSVGSPEVHLSSRLQVTGEAEYTDDTPMPPNCLHAALVLSRRPHARILSIDDSGARSSPGFVGIFFAEDVQGDNRIG 681 (1172)
Q Consensus 602 ~~~~~vG~~~~r~d~~~kvtG~a~Y~~Di~~~~gmL~a~~vrSp~a~a~I~sID~s~A~~~pGVv~Vvt~~Dipg~n~~~ 681 (1172)
+++++|||+++|+|+..||||+++|++|+.+ |||||++++|||++||+|++||+++|+++|||++|+|++|+|+.|.++
T Consensus 3 ~~~~~iG~~~~R~d~~~kvtG~a~Y~~Di~~-pgmL~a~~vrSp~a~a~I~siD~s~A~~~pGV~~V~t~~d~p~~~~~~ 81 (425)
T 3hrd_A 3 KDYQVLGKNKVKVDSLEKVMGTAKFAADYSF-PDMLYAGVFRSTVPHARIVSLDLSKARAIDGVEAVLDYHAIPGKNRFG 81 (425)
T ss_dssp CCCSSTBCCCCCTTHHHHHHTCCCBGGGCCC-TTCEEEEEEECSSSSEEEEEEECHHHHTSTTEEEEECGGGCSSCCCBC
T ss_pred CCCCccCCcCcCcchHHHCCCceecccccCC-CCCEEEEEEeCCCCCEEEEEeEhHHHhcCCCeEEEEEcccCCCcCcCC
Confidence 4678999999999999999999999999998 799999999999999999999999999999999999999999999888
Q ss_pred CCCCCccccccCeEEecCCeEEEEEECCHHHHHHhcccCeeEEecCCccCCHHHHhhcCCC--CC--C--CccccccCCc
Q 001052 682 PVVADEELFASEVVTCVGQVIGVVVAETHEEAKLASRKVQVEYEELPAILSIQEAIDAKSF--HP--N--TERCFRKGDV 755 (1172)
Q Consensus 682 ~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~~Aa~~V~V~ye~lp~v~~~~~A~~~~a~--~~--~--~~~~~~~Gd~ 755 (1172)
....|+|+|++++|+|+|||||+|||+|+|+|++|+++|+|+||++|+++|+++|+++++. ++ | ......+||+
T Consensus 82 ~~~~~~~~la~~~Vr~~G~~VA~VvA~t~~~A~~A~~~v~V~ye~lp~v~~~~~a~~~~a~~~~~~~n~~~~~~~~~Gd~ 161 (425)
T 3hrd_A 82 IIIKDEPCLVDDKVRRYGDAIAVVAAQTPDLVQEALDAITIEYEELEGIFTMERALEEDSPAIHGDTNIHQVKHLEYGDV 161 (425)
T ss_dssp SSSCCBCSSCSSCBCSTTCEEEEEEESSHHHHHHHHHHCEEEEEECCCCCCHHHHHSTTSCCSSTTCSEEEEEEEEESCH
T ss_pred CCCCccccccCceEEECCCeEEEEEECCHHHHHHHhcCCeEEEEeCCCCCCHHHHhhcCCccccCCCccccccccccCCH
Confidence 7778999999999999999999999999999999999999999999999999999988763 32 1 1124578999
Q ss_pred ccccccCCCcEEEEEEEEECcccccCCCCCeEEEEEecCCCeEEEEeCCCChHHHHHHHHHHhCCCCccEEEEeCccCCC
Q 001052 756 DICFQSGQCDKIIEGEVRVGGQEHFYLEPHSSVVWTMDHGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGG 835 (1172)
Q Consensus 756 e~af~~~~a~~vve~~y~~~~~~H~~mEp~~a~A~~~~~~g~l~V~~stQ~p~~~r~~vA~~Lglp~~kV~V~~~~vGGg 835 (1172)
+++| ++|+++||++|++|+|+|+||||++|+|+|+ ++|+|+||+|||+|+.+|..+|++||||++||||+++++|||
T Consensus 162 ~~a~--a~A~~vve~~y~~~~~~H~~mEp~~~~A~~~-~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vGGg 238 (425)
T 3hrd_A 162 DAAF--KQCDIVVEDTYSTHRLTHMFIEPDAGVSYYD-NEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQATTGGG 238 (425)
T ss_dssp HHHH--HTCSEEEEEEEEECCCCCCCSSCCEEEEEEC-TTCCEEEEECCSCHHHHHHHHHHHTTCCGGGEEEEECBCCCC
T ss_pred HHHh--hcCceEEEEEEEeCCccccCCCCceEEEEEC-CCCeEEEEECCCCHHHHHHHHHHHhCCChhhEEEEeCCCCCC
Confidence 9999 9999999999999999999999999999998 467899999999999999999999999999999999999999
Q ss_pred CCCCCCcchHHHHHHHHHHHhCCCCEEEEeChhhhhhhcCCCCceEEEEEEeeCCCCcEEEEEEeEEecCCCCCCchHHH
Q 001052 836 FGGKETRSAFIAAAAAVPSFLLNRPVNLTLDRDIDMMISGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGNSLDLSLAV 915 (1172)
Q Consensus 836 FG~K~~~~~~~~~~aAlaA~k~gRPVkl~~tR~E~~~~~~~R~~~~~~~k~g~d~dG~i~a~~~~~~~d~Ga~~~~s~~v 915 (1172)
||+|.+.. ..+.||++|+++||||||+|||+|+|+.+++||++.+++|+|+|+||+|+||+++++.|+|+|.+++..+
T Consensus 239 FG~K~~~~--~~~~aa~~A~~~grPVk~~~tR~e~~~~~~~R~~~~~~~~~g~d~dG~i~a~~~~~~~~~Ga~~~~~~~~ 316 (425)
T 3hrd_A 239 FGGKLDLS--VQCHCALLTYHTKKPVKMVRSREESTTVSSKRHPMTMHCKTGATKDGRLQAVQVEMFGDTGAYASYGPAV 316 (425)
T ss_dssp TTTTSSCS--SHHHHHHHHHHHCSCEEEECCHHHHHHHSCBCCCEEEEEEEEECTTCCEEEEEEEEEEEEESSCTTHHHH
T ss_pred CCCCcccC--HHHHHHHHHHHhCCCEEEEeehHHHhhhcCCCCCeEEEEEEEECCCCcEEEEEEEEEEccccccccchHH
Confidence 99998754 3468999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHhhccCCCCCCCeEEEEEEEEecCCCCCCccCCCChhhhHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCCCcccccc
Q 001052 916 LERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQRVAVEVRKSPEEIREINFQGEGSILHYGQ 995 (1172)
Q Consensus 916 ~~~~~~~~~~~Y~ipn~~~~~~~v~TN~~~~ga~RG~G~~q~~fa~Es~mDelA~~lg~DP~e~R~~Nl~~~g~~~~~g~ 995 (1172)
+.+...++.++|+|||++++++.|+||+||++||||||.+|++|++|++|||+|++|||||+|||++|++++|+.+++|+
T Consensus 317 ~~~~~~~~~~~Y~ipn~~~~~~~v~tn~~~~ga~Rg~G~~q~~fa~E~~mDelA~~lg~DP~e~R~~N~~~~~~~~~~g~ 396 (425)
T 3hrd_A 317 ITRATVHCMGPYVVPNVRVDAKFVYTNNPMSGAFRGFGVPQASVCHEGQMNALAKALGMDPIDIRILNAHQVGAKLATGQ 396 (425)
T ss_dssp HHHHHHHTTCSBCCSCEEEEEEEEECSSSCBCCCTTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHBCCTTCBCTTSC
T ss_pred HHHHHhhcCCCccCCcEEEEEEEEECCCCCCCcccCCCchHHHHHHHHHHHHHHHHhCcCHHHHHHHhCCCCCCcCCCCC
Confidence 88877788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-cCCCHHHHHHHHHhhc
Q 001052 996 QL-QHCTLFPLWNELKLSC 1013 (1172)
Q Consensus 996 ~~-~~~~l~~~l~~~~~~~ 1013 (1172)
++ +++++.+||+++++++
T Consensus 397 ~~~~s~~~~~~l~~~~~~~ 415 (425)
T 3hrd_A 397 VLENSVGLIETLEKAREKA 415 (425)
T ss_dssp BCCSCCCHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHH
Confidence 99 8999999999999875
No 13
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=100.00 E-value=3e-62 Score=554.12 Aligned_cols=301 Identities=45% Similarity=0.752 Sum_probs=284.6
Q ss_pred CCccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccc
Q 001052 261 NPLNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAV 340 (1172)
Q Consensus 261 ~~~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~v 340 (1172)
+++.+++ ..++||+|+|++||+++|+++|+++++||||+|++++|++...++.+|||++|+||+.|+.++++|+|||+|
T Consensus 2 ~~l~~~g-~~~~y~~P~sl~ea~~ll~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~v 80 (305)
T 3nvz_B 2 KQLRFEG-ERVTWIQASTLKELLDLKAQHPEAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAAC 80 (305)
T ss_dssp CCEEEEC-SSCEEEECCSHHHHHHHHHHCTTCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTC
T ss_pred CceEecC-CCeEEEccCCHHHHHHHHHhCCCCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCC
Confidence 4567777 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEE
Q 001052 341 RLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRT 420 (1172)
Q Consensus 341 Tl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~~g~~R~ 420 (1172)
|++++++++.+.++.++....+.++.|++++++|||+||||+||||||||+++|+||++|+|+||||+|+|.+.+| +|+
T Consensus 81 t~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~sD~~~~L~AldA~v~l~~~~G-~R~ 159 (305)
T 3nvz_B 81 ALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLNPVFMASGTKLTIVSRGT-RRT 159 (305)
T ss_dssp BHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTTCSSHHHHHHHTCEEEEEETTE-EEE
T ss_pred cHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCchHHHHHHHHcCCEEEEEcCCC-cEE
Confidence 9999999987777766655567899999999999999999999999999999999999999999999999999999 999
Q ss_pred EehH-hhhcccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecC-CcceEEEEEEEEEccC
Q 001052 421 TMAE-EFFLGYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEK-DEEWVVSDALLVYGGV 498 (1172)
Q Consensus 421 vpl~-dF~~g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~-~~~~~i~~~ria~Ggv 498 (1172)
||++ |||.||+++.|++||||++|+||.+..+.++.+||+++|+++|||+||+|+.++++++ + +|+++||+|||+
T Consensus 160 vp~~~df~~g~~~t~l~~~Eil~~I~iP~~~~~~~~~~~k~~~R~~~d~a~v~~A~~~~~~~~~~---~i~~~ria~Ggv 236 (305)
T 3nvz_B 160 VPMDHTFFPSYRKTLLGPEEILLSIEIPYSREDEFFSAFKQASRREDDIAKVTCGMRVLFQPGSM---QVKELALCYGGM 236 (305)
T ss_dssp EECCGGGCCSTTCCSCCTTCEEEEEEEECCCTTEEEEEEECSCCCSSSSCCCEEEEEEEESTTSS---BEEEEEEEEESS
T ss_pred EEeehHhhcCcccccCCCCcEEEEEEecCCCCCCceEEEEEEecCCCChhheEEEEEEEEeCCCC---eEEEEEEEEEcc
Confidence 9998 8999999999999999999999999777778899999999999999999999999864 5 899999999999
Q ss_pred CCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhc
Q 001052 499 APLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1172)
Q Consensus 499 ~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~ 566 (1172)
+++|+|++++|++|.||.|+++++++|++.+.++++++.+++++|++||++|+.+|++|||.++.+++
T Consensus 237 ~~~p~ra~~~E~~L~G~~~~~~~~~~a~~~~~~~~~~~~~d~~~s~~YR~~la~~l~~r~l~~~~~~l 304 (305)
T 3nvz_B 237 ADRTISALKTTQKQLSKFWNEKLLQDVCAGLAEELSLSPDAPGGMIEFRRTLTLSFFFKFYLTVLKKL 304 (305)
T ss_dssp SSSCEECHHHHHTTTTCBSSHHHHHHHHHHHHHHTCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEeeHHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999867777899999999999999999999998765
No 14
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1e-60 Score=538.97 Aligned_cols=284 Identities=22% Similarity=0.363 Sum_probs=269.9
Q ss_pred CceEEecCCHHHHHHHHhhCCC--cEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSKYPD--SKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLK 347 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~~~~--a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~ 347 (1172)
.|+|++|+||+||+++|+++|+ ++++||||+|++++|.+...|+.+|||++|+||++|+.++++|+|||+||+++|++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~ 82 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFTQIEN 82 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHHHHHH
T ss_pred ceeEeCCCCHHHHHHHHHhCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHHHHHh
Confidence 5899999999999999999984 99999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehHhhh
Q 001052 348 MFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFF 427 (1172)
Q Consensus 348 ~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~~g~~R~vpl~dF~ 427 (1172)
+ +.+++ .+|.|++++++|||+||||+||||||||+++|+||++|+|+||||+|+|.+.+| +|+||++|||
T Consensus 83 ~--~~~~~-------~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p~sD~~~~LlAldA~v~l~~~~g-~R~vp~~dF~ 152 (296)
T 3hrd_C 83 H--PFIRS-------HVRALYKAASQVGSPQIRNLGTIGGNLSTSSVAGDGVSAMTTLDATVVLESVRG-TRQMKLTDFF 152 (296)
T ss_dssp C--HHHHH-------HCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCTTCHHHHHHHHTTCEEEEEETTE-EEEEEHHHHH
T ss_pred C--hhhhh-------HhHHHHHHHHHhCCHHHhcceehhhhhccCCCchHHHHHHHHhCcEEEEEcCCc-eEEEEHHHHh
Confidence 7 44543 678999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred cccc---cccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCcccc
Q 001052 428 LGYR---KVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLS 504 (1172)
Q Consensus 428 ~g~~---~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~r 504 (1172)
.||+ +|.|++||||++|+||.+..+.++.|||+++|+++|||+||+|+.+++++++ +|+++||+|||++++|+|
T Consensus 153 ~g~~~~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~d~a~v~~A~~~~~~~~g---~i~~~ria~Ggv~~~p~r 229 (296)
T 3hrd_C 153 DGEGFKRRNALEADEIMTEVIIDRPDAHSASAFYKLAKRKSLAISVIGGGMAVKVDDAG---VCTWASMRGGCIGRYPLH 229 (296)
T ss_dssp HCCSSSSSSSCCTTCEEEEEEEECCCTTEEEEEEEECSSSSSCCCSEEEEEEEEEETTT---EEEEEEEEEETSSSSCEE
T ss_pred cccccccccCCCCCcEEEEEEecCCCCCCceEEEEeccccccchhhheEEEEEEEcCCC---eEEEEEEEEECCCccccc
Confidence 9999 9999999999999999987677888999999999999999999999999777 899999999999999999
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhcc
Q 001052 505 AKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQME 567 (1172)
Q Consensus 505 a~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~~ 567 (1172)
++++|++|.||.|+++++++|++.+.+++.|.++. ++|++||++|+.+|++|+|.++.++.+
T Consensus 230 a~~~E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~-r~s~~YR~~la~~l~~r~l~~~~~~~~ 291 (296)
T 3hrd_C 230 FKQAEEMLVGAPLTMETMEATLPILHDTVYDMARA-RPSVLYKKESVQGVFKKLFVDILDQLE 291 (296)
T ss_dssp CHHHHHHHTTSBCCHHHHHTTHHHHHHHHHHHTTT-CTTHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHhcCCCCCHHHHHHHHHHHHhhCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999876554 799999999999999999999998765
No 15
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=100.00 E-value=2.2e-58 Score=518.04 Aligned_cols=280 Identities=21% Similarity=0.285 Sum_probs=261.5
Q ss_pred CCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHHHHH
Q 001052 269 GGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 348 (1172)
Q Consensus 269 ~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~ 348 (1172)
..|+|++|+||+||+++|+++++++++||||+|++++|.+...|+.+|||++|+||+.|+.++++|+|||+||+++|+++
T Consensus 4 ~~f~y~~P~sl~ea~~ll~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l~~~ 83 (288)
T 1t3q_C 4 PAFSYRAPASLQEVIQVLADDPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRNKTD 83 (288)
T ss_dssp CCCEEECCSSHHHHHHHHHHCTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHHHHC
T ss_pred CCceEECCCCHHHHHHHHhhCCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHHhcC
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehHhhhc
Q 001052 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 428 (1172)
Q Consensus 349 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~~g~~R~vpl~dF~~ 428 (1172)
+.+++ .++.|++++++|||+||||+||||||||+++|+||++|+|+||||+|+|.+.+| +|+||++|||.
T Consensus 84 --~~~~~-------~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p~sD~~~~L~Al~A~v~l~~~~g-~R~vp~~dF~~ 153 (288)
T 1t3q_C 84 --PTVAK-------CVPILPKVLAHVAHQAVRNRGTLGGSLAHADAGAEMPFLMATLGATMYIASSAG-VRSVSATDFMK 153 (288)
T ss_dssp --HHHHH-------HCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCTTCHHHHHHHHTTCEEEEEETTE-EEEEEHHHHEE
T ss_pred --HHHHH-------HHHHHHHHHHHhCCHHHHcceechhhcccCCCcHHHHHHHHHcCcEEEEEcCCc-eEEEEHHHHhc
Confidence 44443 567999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred ccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHH
Q 001052 429 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKT 508 (1172)
Q Consensus 429 g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~ 508 (1172)
||++|.|++||||++|+||.+....+ |+|+.+|.. |||+||+|+.+++++ + +|+++||+|||++++|+|++++
T Consensus 154 g~~~t~L~~~Eil~~I~iP~~~~~~~--y~K~~~R~~-d~a~v~~a~~~~~~~-~---~i~~~ria~Ggv~~~p~r~~~~ 226 (288)
T 1t3q_C 154 GHYFTDLEAGEVLVRVEIPIPALHWE--FDEYARRKG-DYALVMAAAGLSMQG-G---RCVAARIALGAVEERAHQAIRA 226 (288)
T ss_dssp ETTEESCCTTCEEEEEEEECCSSEEE--EEEECSSTT-SCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHH
T ss_pred CcccccCCCCCEEEEEEecCCCCCCc--EEEeCCCcc-chhheEEEEEEEEcC-C---eEEEEEEEEECCCCeeEEcHHH
Confidence 99999999999999999999865433 788887776 999999999999985 4 7999999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhc
Q 001052 509 KTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1172)
Q Consensus 509 E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~ 566 (1172)
|++|.||.|+++++++|++.+.+++.|.++ .++|++||++|+.+|++|+|.++.+..
T Consensus 227 E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d-~r~s~~YR~~l~~~l~~r~l~~~~~~~ 283 (288)
T 1t3q_C 227 NDFLVGKVIDESTAATAAELATEGLEPRSD-IHGSRDLRLSLAKAITQRVILKAAQGA 283 (288)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHTTCCCCCB-TTBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHHhhCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999987665 489999999999999999999988754
No 16
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=100.00 E-value=2.8e-58 Score=465.13 Aligned_cols=160 Identities=59% Similarity=1.105 Sum_probs=151.5
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCc
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1172)
+.|+|+|||+++...+++|+++||||||+. ||||||.||++|.||||||+||++++.++++++++|+||++|+.+++|+
T Consensus 3 ~~i~~~vNG~~~~~~~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd~~~~~~~~~~g~~v~SCl~~a~~~~G~ 82 (164)
T 3nvw_A 3 DELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLSKYDRLQDKIIHFSANACLAPICTLHHV 82 (164)
T ss_dssp CCEEEEETTEEEEETTCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEEEEETTTTEEEEEEEETTTCBGGGCTTC
T ss_pred ceEEEEECCEEEEEecCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEccccccccccCCcEEehhhhhHHHhCCc
Confidence 579999999997433599999999999996 9999999999999999999999999989999999999999999999999
Q ss_pred eEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHH
Q 001052 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1172)
Q Consensus 98 ~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1172)
+|+|||||++..+.|||||+||+++|++|||||||||||++++||+++|.| +++||+++|+|||||||||++|++|+++
T Consensus 83 ~I~TiEGL~~~~~~lhpvQ~af~~~~~~QCGfCtPG~imsa~aLl~~~p~p-t~~eI~~al~GNlCRCTgY~~I~~Av~~ 161 (164)
T 3nvw_A 83 AVTTVEGIGSTKTRLHPVQERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEP-TVEEIEDAFQGNLCRCTGYRPILQGFRT 161 (164)
T ss_dssp EEECGGGTCCTTSCCCHHHHHHHHTTCCSSCTTHHHHHHHHHHHHHHCSSC-CHHHHHTSCTTCCCSSSCSHHHHHHHHT
T ss_pred ceEEecccCCCCCccCHHHHHHHHcCCCcCccchhhHHHHHHHHHHhCCCC-CHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 999999998434679999999999999999999999999999999999999 9999999999999999999999999998
Q ss_pred HH
Q 001052 178 FA 179 (1172)
Q Consensus 178 ~~ 179 (1172)
|+
T Consensus 162 ~~ 163 (164)
T 3nvw_A 162 FA 163 (164)
T ss_dssp TC
T ss_pred Hh
Confidence 75
No 17
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=100.00 E-value=3.7e-57 Score=508.77 Aligned_cols=281 Identities=19% Similarity=0.255 Sum_probs=261.8
Q ss_pred CceEEecCCHHHHHHHHhhC-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 348 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~ 348 (1172)
.|+|++|+|++||+++|+++ +++++++|||+|++++|.+...++.+|||++|+||+.|+.++++|+|||+||+++|+++
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~l~~~ 84 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKLGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHALIGS 84 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHHHHHC
T ss_pred ceEEECcCCHHHHHHHHHhcCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHHhcC
Confidence 58999999999999999987 89999999999999999999999999999999999999999999999999999999975
Q ss_pred HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehHhhhc
Q 001052 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 428 (1172)
Q Consensus 349 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~~g~~R~vpl~dF~~ 428 (1172)
+.+++ .++.|.+++++|||+||||+||||||||+++|+||++|+|+||||+|++.+.+| +|++|++|||.
T Consensus 85 --~~~~~-------~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p~sD~~~~L~Al~A~v~l~~~~G-~r~v~~~df~~ 154 (288)
T 1n62_C 85 --DFLAA-------KLPIIRETSLLIADPQIRYMGTIGGNAANGDPGNDMPALMQCLGAAYELTGPEG-ARIVAARDYYQ 154 (288)
T ss_dssp --HHHHH-------HCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCTTCSHHHHHHHHTCEEEEEETTE-EEEEEHHHHEE
T ss_pred --hHHHH-------HHHHHHHHHHHhCCHHHHccccccchhccCCCchHHHHHHHHhCcEEEEEeCCc-cEEEEHHHHhc
Confidence 33433 578999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHH
Q 001052 429 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKT 508 (1172)
Q Consensus 429 g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~ 508 (1172)
||+++.|++||||++|+||.+..+.++.|+|+. |+..|||+||+|+.+++++ + +|+++||+|||++++|+|+.++
T Consensus 155 g~~~t~l~~~eil~~i~ip~~~~~~~~~y~k~~-rr~~d~a~v~~a~~~~~~~-~---~i~~~ria~Ggv~~~p~ra~~~ 229 (288)
T 1n62_C 155 GAYFTAIEPGELLTAIRIPVPPTGHGYAYEKLK-RKIGDYATAAAAVVLTMSG-G---KCVTASIGLTNVANTPLWAEEA 229 (288)
T ss_dssp ETTEESCCTTCEEEEEEEECCCTTCEEEEEEEC-SSTTCCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHH
T ss_pred CcccccCCCCCEEEEEEeCCCCCCCceEEEEeC-CCccCHhheeEEEEEEEcC-C---eEEEEEEEEECCcCceEECHHH
Confidence 999999999999999999998766667777887 5556999999999999984 4 8999999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhhc
Q 001052 509 KTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQM 566 (1172)
Q Consensus 509 E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~~ 566 (1172)
|++|.||.|+++++++|++.+.+++.|.++. ++|++||++|+.+|++|+|.++.+..
T Consensus 230 E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~-r~s~~YR~~l~~~l~~r~l~~~~~~~ 286 (288)
T 1n62_C 230 GKVLVGTALDKPALDKAVALAEAITAPASDG-RGPAEYRTKMAGVMLRRAVERAKARA 286 (288)
T ss_dssp HHHHTTSCCCHHHHHHHHHHHHHHCCCCCBT-TBCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCCCHHHHHHHHHHHHhhCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999876664 89999999999999999999987653
No 18
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=100.00 E-value=1.8e-56 Score=507.14 Aligned_cols=276 Identities=20% Similarity=0.250 Sum_probs=256.9
Q ss_pred CceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCC-cEEEcccccHHHHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDD-GLEIGAAVRLTELLKM 348 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~-~l~IGA~vTl~~l~~~ 348 (1172)
.|+|++|+||+||+++|++ |+++++||||+|++++|.+...|+.+|||++|+||+.|+.+++ +|+|||+||+++|+++
T Consensus 6 ~f~y~~P~sl~ea~~ll~~-~~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~~l~~~ 84 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALAA-EATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEH 84 (324)
T ss_dssp CCEEECCSSHHHHHHHTTS-TTEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHHHHHC
T ss_pred ceEEEccCCHHHHHHHHhC-CCCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHHHHHhC
Confidence 5799999999999999986 8999999999999999999999999999999999999999765 9999999999999987
Q ss_pred HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccc--------------------------------------c
Q 001052 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNI--------------------------------------C 390 (1172)
Q Consensus 349 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI--------------------------------------~ 390 (1172)
+.+.+ .+|.|++++++|||+||||+||||||| |
T Consensus 85 --~~~~~-------~~p~L~~a~~~ias~qIRN~aTiGGNl~~~~rC~y~~~~~~~k~~g~~c~a~~g~~~~~a~~g~~c 155 (324)
T 1rm6_B 85 --DAIRT-------TWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRC 155 (324)
T ss_dssp --HHHHH-------HSHHHHHHHHHSSCHHHHHHCBHHHHHTCCCBCTTTSSCHHHHHHTTCBTTBBCSCCSSSTTCSSC
T ss_pred --hHHHH-------HHHHHHHHHHHhCCHHHcceeEeeeecccccccccccccccccccCccccccccccceeecccccc
Confidence 44443 688999999999999999999999999 6
Q ss_pred ccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehHhhhcc--cccccCCCCeEEEEEEccCCCCccceeeeeecccCcccc
Q 001052 391 TASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFLG--YRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDI 468 (1172)
Q Consensus 391 ~asp~sD~~~~Llal~A~v~l~s~~g~~R~vpl~dF~~g--~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~di 468 (1172)
+++|+||++|+|+||||+|+|.+.+| +|+||++|||.| +++|.|++||||++|+||.+ ....+.|+|+++|+++||
T Consensus 156 ~a~p~sD~~~~L~AldA~v~l~~~~g-~R~vp~~dF~~~~~~~~t~L~~~Eil~~I~iP~~-~~~~~~y~K~~~R~~~d~ 233 (324)
T 1rm6_B 156 YATYHGDVAPALMVLDARAEIVGPAG-KRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPT-GAWSAAYSKVRIRDAVDF 233 (324)
T ss_dssp CCBCCCSHHHHHHHTTCEEEEEETTE-EEEEEGGGGBCSCTTSCBCCCTTCEEEEEEECCC-TTCEEEEEEECSSSSSCC
T ss_pred cCCCcchhHHHHHHcCCEEEEEeCCC-cEEEEHHHHhcCCccccccCCCCCEEEEEEecCC-CCCceEEEEECcCCccch
Confidence 99999999999999999999999998 999999999987 78999999999999999963 445677889999999999
Q ss_pred ceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHHHHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHH
Q 001052 469 ALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKTKTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRK 548 (1172)
Q Consensus 469 a~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~ 548 (1172)
|+||+|+.+++++ + +|+++||+|||++++|+|+ ++|++| ||.|+++++++|++.+.+++.|.++ .++|++||+
T Consensus 234 a~v~~A~~~~~~~-~---~i~~~ria~Ggva~~p~ra-~~E~~L-G~~~~~~~~~~a~~~~~~~~~p~~d-~r~s~~YR~ 306 (324)
T 1rm6_B 234 PLAGVAAALQRDG-D---RIAGLRVAITGSNSAPLMV-PVDALL-GGNWDDAAAETLAQLVRKTSNVLRT-TITGVKYRR 306 (324)
T ss_dssp CSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEEC-CCGGGT-TSCCSHHHHHHHHHHHHHHCCCCTT-SSSCHHHHH
T ss_pred hhEEEEEEEEEcC-C---cEEEEEEEEEcCCCeEEeh-HHHHHc-CCCCCHHHHHHHHHhhhccCCCCCC-CCCCHHHHH
Confidence 9999999999985 4 8999999999999999999 999999 9999999999999999999987655 589999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 001052 549 SLTLSFFFKFFLWVSH 564 (1172)
Q Consensus 549 ~la~~L~~r~l~~~~~ 564 (1172)
+|+.+|++|+|.++..
T Consensus 307 ~la~~l~~r~l~~~~~ 322 (324)
T 1rm6_B 307 RVLLAISRKVVDQLWE 322 (324)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998764
No 19
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=100.00 E-value=2.8e-54 Score=485.12 Aligned_cols=280 Identities=24% Similarity=0.299 Sum_probs=260.2
Q ss_pred CceEEecCCHHHHHHHHhhC-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSKY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKM 348 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~ 348 (1172)
.|+|++|+|++|++++++++ +++++++|||+|++++|.+...++.+|||++|+||+.|+.++++|+|||++|+++++++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i~~~~~~l~iGA~~tl~~l~~~ 84 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQLGSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGIREEGSTVVIGAMTVENDLISS 84 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHHGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCEEEETTEEEEETTCBHHHHHHC
T ss_pred cceEECCCCHHHHHHHHHhcCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHHHhhC
Confidence 58999999999999999987 78999999999999999998889999999999999999999999999999999999974
Q ss_pred HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeCCCCeEEEehHhhhc
Q 001052 349 FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDCKGNIRTTMAEEFFL 428 (1172)
Q Consensus 349 l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~~g~~R~vpl~dF~~ 428 (1172)
+.+.+ .++.|.++++++|++||||+||||||||+++|.||++++|+||||+|++.+.+| .|++|++|||.
T Consensus 85 --~~~~~-------~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~~D~~~~l~Al~A~v~~~~~~G-~r~i~~~df~~ 154 (287)
T 1ffv_C 85 --PIVQA-------RLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPGNDHPALSIAVEAHFVLEGPNG-RRTVPADGFFL 154 (287)
T ss_dssp --HHHHH-------HCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTTCSHHHHHHHTTCEEEEEETTE-EEEEESTTTEE
T ss_pred --hHHHH-------HhHHHHHHHHHhCCHHHhcceechhhhccCCCcHHHHHHHHHcCcEEEEEcCCc-eEEEEHHHHhc
Confidence 33332 568999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred ccccccCCCCeEEEEEEccCCCCccceeeeeecccCccccceeeeEEEEEEecCCcceEEEEEEEEEccCCCccccHHHH
Q 001052 429 GYRKVDLTSGEILLSIFLPWTRPFEFVKEFKQAHRRDDDIALVNAGMRVYLEEKDEEWVVSDALLVYGGVAPLSLSAKKT 508 (1172)
Q Consensus 429 g~~~t~L~~~Eil~~I~iP~~~~~~~~~~~K~~~R~~~dia~v~~A~~~~~~~~~~~~~i~~~ria~Ggv~~~p~ra~~~ 508 (1172)
||+++.|+++|||++|+||.+..+.++.|+|+. |+..|||+||+|+.+++++ + +|+++||+|||++++|+|+.++
T Consensus 155 g~~~t~l~~~eii~~i~ip~~~~~~~~~~~k~~-rr~~d~a~v~~a~~~~~~~-~---~i~~~ria~Ggv~~~p~ra~~~ 229 (287)
T 1ffv_C 155 GTYMTLLEENEVMVEIRVPAFAQGTGWAYEKLK-RKTGDWATAGCAVVMRKSG-N---TVSHIRIALTNVAPTALRAEAA 229 (287)
T ss_dssp ETTEESCCTTCEEEEEEEECCCTTCEEEEEEEC-SSTTSCCSEEEEEEEEEET-T---EEEEEEEEEESSSSSCEECHHH
T ss_pred CcccccCCCCCEEEEEEecCCCCCCceEEEEEC-CcccchhheEEEEEEEEcC-C---eEEEEEEEEEcccCCcccCHHH
Confidence 999999999999999999998766667777887 5556999999999999984 4 8999999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHhhccccccCCCCCCCChhHHHHHHHHHHHHHHHHHhhh
Q 001052 509 KTFIVGKSWSQELLQNALKILQTDIILKEDAPGGMVDFRKSLTLSFFFKFFLWVSHQ 565 (1172)
Q Consensus 509 E~~L~Gk~l~~~~l~~a~~~l~~e~~~~~~~~~~saeYR~~la~~L~~r~l~~~~~~ 565 (1172)
|++|.||.|++++++++++.+.+++.|.++. ++|++||++|+.+|++|+|.++.+.
T Consensus 230 E~~L~G~~~~~~~~~~a~~~~~~~~~p~~d~-r~s~~YR~~l~~~l~~r~l~~~~~~ 285 (287)
T 1ffv_C 230 EAALLGKAFTKEAVQAAADAAIAICEPAEDL-RGDADYKTAMAGQMVKRALNAAWAR 285 (287)
T ss_dssp HHTTBTSBCCHHHHHHHHHHHHHTCCCCCBT-TBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHHhcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999876664 8999999999999999999998764
No 20
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=100.00 E-value=1.5e-53 Score=431.32 Aligned_cols=150 Identities=37% Similarity=0.656 Sum_probs=144.6
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCc
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1172)
|.|+|+|||++++++ ++|+++|||+||+. ||||+|.||++|.||||||+||+ ++++||++|+.+++|+
T Consensus 4 ~~i~~~vNG~~~~v~-v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~vdG----------~~v~sC~~~~~~~~G~ 72 (160)
T 3hrd_D 4 ITINLNLNGEARSIV-TEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIFNG----------DPVTTCCMLAGQADES 72 (160)
T ss_dssp EEEEEEETTEEEEEE-ECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEETT----------EEEEGGGSBGGGGTTE
T ss_pred ceEEEEECCEEEEEe-cCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEECC----------EEEEchhhhhhhhCCC
Confidence 689999999999996 99999999999996 99999999999999999999996 7999999999999999
Q ss_pred eEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHH
Q 001052 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1172)
Q Consensus 98 ~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1172)
+|+|||||+ +.+.|||||+||+++|++|||||||||||++++||+++|+| |++||+++|+|||||||||++|++|++.
T Consensus 73 ~I~TiEgl~-~~~~l~pvq~af~~~~~~QCGfCtpG~ims~~all~~~~~p-t~~eI~~al~GNlCRCtgY~~I~~Av~~ 150 (160)
T 3hrd_D 73 TIITLEGVA-EDGKPSLLQQCFLEAGAVQCGYCTPGMILTAKALLDKNPDP-TDEEITVAMSGNLCRCTGYIKIHAAVRY 150 (160)
T ss_dssp EEECGGGTS-BTTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHTTCSSC-CHHHHHHHHTTCCCSSSCSHHHHHHHHH
T ss_pred ceEEeCCCC-CCCccCHHHHHHHHcCCCcCCcchhhHHHHHHHHHHhCCCC-CHHHHHHHHcCCCCCCCCcHHHHHHHHH
Confidence 999999998 66789999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhc
Q 001052 178 FAKT 181 (1172)
Q Consensus 178 ~~~~ 181 (1172)
+++.
T Consensus 151 aa~~ 154 (160)
T 3hrd_D 151 AVER 154 (160)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9854
No 21
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=100.00 E-value=1.2e-50 Score=412.94 Aligned_cols=150 Identities=41% Similarity=0.760 Sum_probs=144.0
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCc
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1172)
+.|+|+|||++++++ ++|+++|||+||+. +++|+|.||++|.||||||+||+ ++++||++|+.+++|+
T Consensus 4 ~~i~~~vNG~~~~~~-v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~vdG----------~~v~sC~~~~~~~~G~ 72 (163)
T 1ffv_A 4 KIITVNVNGKAQEKA-VEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDIDG----------RSVKSCTHLAVQCDGS 72 (163)
T ss_dssp EEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETT----------EEEEGGGSBGGGGTTC
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEECC----------cEecchHhhHHHhCCc
Confidence 579999999999996 99999999999995 99999999999999999999997 7999999999999999
Q ss_pred eEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHH
Q 001052 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1172)
Q Consensus 98 ~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1172)
+|+|||||+ ..+.+||+|++|+++|++|||||||||||++++||+++|.| |++||+++|+|||||||||++|++|++.
T Consensus 73 ~I~TiEgL~-~~~~l~pvq~a~~~~~~~QCG~CtpG~imsa~all~~~~~p-t~~ei~~~l~gnlCRCtgY~~I~~Av~~ 150 (163)
T 1ffv_A 73 EVLTVEGLA-NKGVLHAVQEGFYKEHGLQCGFCTPGMLMRAYRFLQENPNP-TEAEIRMGMTGNLCRCTGYQNIVKAVQY 150 (163)
T ss_dssp EEECGGGTS-BTTBCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHTTTCCCSSSCSHHHHHHHHH
T ss_pred eEEEECCCC-CCCCcCHHHHHHHHhCCccCccccHhHHHHHHHHHHcCCCC-CHHHHHHHHcCCccCCCCCHHHHHHHHH
Confidence 999999998 56789999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhc
Q 001052 178 FAKT 181 (1172)
Q Consensus 178 ~~~~ 181 (1172)
+++.
T Consensus 151 ~a~~ 154 (163)
T 1ffv_A 151 AARK 154 (163)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8853
No 22
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=100.00 E-value=2.1e-50 Score=412.32 Aligned_cols=151 Identities=36% Similarity=0.665 Sum_probs=143.9
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCc
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1172)
+.|+|+|||+.++++ ++|+++|||+||+. |++|+|.||++|.||||||+||+ ++++||++|+.+++|+
T Consensus 4 ~~i~~~vNG~~~~~~-v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~vdG----------~~v~SC~~~~~~~~G~ 72 (166)
T 1n62_A 4 AHIELTINGHPVEAL-VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDLDG----------MSVKSCTMFAVQANGA 72 (166)
T ss_dssp EEEEEEETTEEEEEE-ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEETT----------EEEEGGGSBGGGGTTC
T ss_pred ceEEEEECCEEEEEe-cCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEECC----------cEEechhhhHHHhCCc
Confidence 579999999999996 99999999999995 99999999999999999999997 7999999999999999
Q ss_pred eEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHH
Q 001052 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1172)
Q Consensus 98 ~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1172)
+|+|||||++.++.+||+|++|+++|++|||||||||||++++||+++|.| |++||+++|+|||||||||++|++|++.
T Consensus 73 ~V~TiEgL~~~~~~~~pvq~a~~~~~~~QCG~CtpG~imsa~all~~~~~p-t~~eI~~~l~gNlCRCtgY~~I~~Av~~ 151 (166)
T 1n62_A 73 SITTIEGMAAPDGTLSALQEGFRMMHGLQCGYCTPGMIMRSHRLLQENPSP-TEAEIRFGIGGNLCRCTGYQNIVKAIQY 151 (166)
T ss_dssp EEECGGGSSCTTSCCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHTTTCCCSSSTTHHHHHHHHH
T ss_pred eEEEeCCCCCcCCccCHHHHHHHHcCCccCCccchhHHHHHHHHHHcCCCC-CHHHHHHHHcCCccCCCCCHHHHHHHHH
Confidence 999999998325789999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHhc
Q 001052 178 FAKT 181 (1172)
Q Consensus 178 ~~~~ 181 (1172)
++..
T Consensus 152 ~a~~ 155 (166)
T 1n62_A 152 AAAK 155 (166)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8853
No 23
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=100.00 E-value=9.8e-46 Score=378.08 Aligned_cols=149 Identities=42% Similarity=0.726 Sum_probs=143.1
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCc
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGM 97 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~ 97 (1172)
+.|+|+|||++++++ ++|++|||++||+. +++|+|.||++|.||||||+||+ ++++||++|+.+++|+
T Consensus 3 ~~i~~~vNG~~~~v~-~~~~~tLL~~Lr~~~gl~g~k~gC~~G~CGaCtV~vdG----------~~v~sC~~~~~~~~G~ 71 (161)
T 1rm6_C 3 NILRLTLNGRAREDL-VPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDD----------RPRLACSTLAHQVAGK 71 (161)
T ss_dssp EEEEEEETTEEEEEE-EETTCBHHHHHHHTTCCTTSCCCSSSSSSCTTEEEETT----------EEEEGGGSBGGGGTTS
T ss_pred ceEEEEECCEEEEEe-cCCcCcHHHHHHHcCCCcccccCCCCCCCCCCEEEECC----------cEEechHHHHHHhCCc
Confidence 469999999999996 89999999999996 99999999999999999999997 7899999999999999
Q ss_pred eEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHHHH
Q 001052 98 HVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAFRV 177 (1172)
Q Consensus 98 ~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~~~ 177 (1172)
+|+|||||+ ..+.+||+|++|+++|++|||||||||||++|+||+++|+| ++++|+++|+|||||||||++|++|++.
T Consensus 72 ~v~TiEgL~-~~~~~~p~q~a~~~~~~~qCG~Ctpg~im~a~~ll~~~~~p-t~~~i~~~l~gnlcRCtgy~~i~~A~~~ 149 (161)
T 1rm6_C 72 KVETVESLA-TQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSP-SRDEIKAALAGNLCRCTGYVKIIKSVET 149 (161)
T ss_dssp EEECGGGSS-BTTBCCHHHHHHHHHTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHTTTCCCSSSCSHHHHHHHHH
T ss_pred eEEEECCCC-CCCccCHHHHHHHHhCCCcCCCCchHHHHHHHHHHhcCCCC-CHHHHHHHHcCCeECCCCCHHHHHHHHH
Confidence 999999998 46789999999999999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHh
Q 001052 178 FAK 180 (1172)
Q Consensus 178 ~~~ 180 (1172)
+++
T Consensus 150 ~~~ 152 (161)
T 1rm6_C 150 AAA 152 (161)
T ss_dssp HHH
T ss_pred HHH
Confidence 885
No 24
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=100.00 E-value=2.1e-41 Score=349.76 Aligned_cols=152 Identities=37% Similarity=0.730 Sum_probs=143.9
Q ss_pred cceEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccC
Q 001052 17 WTKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE 95 (1172)
Q Consensus 17 ~~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~ 95 (1172)
..|.++|+|||+.++++ ++|++|||++||+. |++|+|.||++|.||+|+|+||+ ++++||++|+..++
T Consensus 8 ~~m~i~~~ing~~~~~~-v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~vdG----------~~v~sC~~~~~~~~ 76 (168)
T 1t3q_A 8 QLMRISATINGKPRVFY-VEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILIDG----------APMRSCLTLAVQAE 76 (168)
T ss_dssp CCEEEEEEETTEEEEEE-ECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEETT----------EEEEGGGSBGGGGT
T ss_pred CcceEEEEECCEEEEEe-cCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEECC----------CEeechhhHHHHhC
Confidence 35789999999999996 89999999999996 99999999999999999999986 78999999999999
Q ss_pred CceEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHhCCCCCCHHHHHHHhhcCccccCCChhHHHHH
Q 001052 96 GMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRSSQTPPTEEQIEESLAGNLCRCTGYRPIVDAF 175 (1172)
Q Consensus 96 g~~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~~~~~~~~~~i~~~l~gnlCRCtgy~~i~~a~ 175 (1172)
|++|+|||||+ ....+||+|++|+++|+.|||||||||+|++++||++++.| ++++|+++|+||+||||||++|++|+
T Consensus 77 G~~v~Tiegl~-~~~~~~~~q~a~~~~~~~qCG~C~pg~i~~a~~ll~~~~~p-~~~~i~~~l~gnlcRCt~y~~~v~A~ 154 (168)
T 1t3q_A 77 GCSIETVEGLS-QGEKLNALQDSFRRHHALQCGFCTAGMLATARSILAENPAP-SRDEVREVMSGNLCRCTGYETIIDAI 154 (168)
T ss_dssp TCEEECGGGTC-CSSSCCHHHHHHHHTTCCSSCSSHHHHHHHHHHHHHHCSSC-CHHHHHHHGGGSCCSSSCSHHHHHHH
T ss_pred CCeEEEEcCCC-CccccCHHHHHHHHhCCCcCCCchHHHHHHHHHHHhcCCCC-CHHHHHHHHcCCcccCCCchHHHHHH
Confidence 99999999998 46689999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred HHHHhc
Q 001052 176 RVFAKT 181 (1172)
Q Consensus 176 ~~~~~~ 181 (1172)
+.+++.
T Consensus 155 ~~~~~~ 160 (168)
T 1t3q_A 155 TDPAVA 160 (168)
T ss_dssp TCHHHH
T ss_pred HHHHHH
Confidence 987753
No 25
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.85 E-value=9.5e-21 Score=216.00 Aligned_cols=138 Identities=28% Similarity=0.350 Sum_probs=118.4
Q ss_pred ceeeeEEeeeecccccccccccccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC
Q 001052 1032 KKRGIAMVPTKFGISFTLKLMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPN 1111 (1172)
Q Consensus 1032 ~grGia~~~~~~g~~~~~~~~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~ 1111 (1172)
|+||+++++..++.+ .....+++.+.|+|++||+|+|.+|.+|||||++|+++||+||+||+|+++|+|..+||+.+|+
T Consensus 2 k~rGiGia~~~~~~g-~~~~~~~~~a~v~i~~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~ 80 (330)
T 3hrd_B 2 KKRGKGVGSMWYGIG-NTGLPNPAAAFVEIHGDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPD 80 (330)
T ss_dssp EEEEEEEEEEEEECS-STTSCCCEEEEEEECTTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCC
T ss_pred cEEEEEEEEEEEecC-CCCCCCcceEEEEEeCCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCC
Confidence 456777777777766 2233567889999999999999999999999999999999999999999999999999999999
Q ss_pred CccCcccchhHHhHHHHHHHHHHHHHHHHHHHHhCC----------------------CCCHHHHHHHHh-ccccceeEE
Q 001052 1112 ASPTAASASSDIYGAAVLDACEQIKARMEPIASKHN----------------------FNSFAEKIIMFC-NILSSQVHV 1168 (1172)
Q Consensus 1112 ~~~t~~Sr~t~~~g~Av~~A~~~Lr~rL~~~aa~~~----------------------~~~w~~~i~~~~-~~~~~~~~~ 1168 (1172)
+++|+|||++++.|.|+++||++||++|+++|++++ ..+|.|++..++ ..+.+..++
T Consensus 81 ~~~T~gSrst~~~g~Av~~Aa~~lr~~L~~~AA~~~~~~~~~l~~~~G~v~~~~~~~~~~s~~ela~~a~~~~~~l~~~g 160 (330)
T 3hrd_B 81 GGATSASRQTLITGNAVILACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERSMTYGELMAAMKAAGRMAVGAG 160 (330)
T ss_dssp CCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSSCCCSSSBCCCCSSCSCSCCBHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCcchHhHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEECCCCCCcccHHHHHHHHhhcCCceeEEE
Confidence 999999999999999999999999999999998753 257999999885 334444444
Q ss_pred ee
Q 001052 1169 MF 1170 (1172)
Q Consensus 1169 ~~ 1170 (1172)
.|
T Consensus 161 ~~ 162 (330)
T 3hrd_B 161 SY 162 (330)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 26
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.75 E-value=5e-09 Score=128.38 Aligned_cols=108 Identities=22% Similarity=0.330 Sum_probs=87.8
Q ss_pred EEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcc----cCc-c-CCCCCceEEEEeccccCCCcccceeecccccchhcc
Q 001052 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTK----LGC-G-EGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL 94 (1172)
Q Consensus 21 i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k----~gC-~-~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~ 94 (1172)
|+|++||+.+++ ++++|||+.||+.|+.... .+| + .|.||+|+|.+++. ..+.||.+++.
T Consensus 2 v~~~ing~~v~v---~~g~tiL~a~~~~gi~ip~lC~~~~~~~~~G~Cg~C~V~v~g~---------~~~~aC~t~v~-- 67 (574)
T 3c8y_A 2 KTIIINGVQFNT---DEDTTILKFARDNNIDISALCFLNNCNNDINKCEICTVEVEGT---------GLVTACDTLIE-- 67 (574)
T ss_dssp EEEEETTEEEEE---CCCCBHHHHHHHTTCCCCCSSCBTTBCCSSSCCCTTEEEETTT---------EEEEGGGCBCC--
T ss_pred eEEEECCEEEEe---CCCCHHHHHHHHcCCCCCcccCCCCCCCCcccCCCCEEEeCCC---------cccccCCCCcc--
Confidence 789999998875 6899999999997664221 244 5 89999999999861 16899999987
Q ss_pred CCceEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchHHHHHHHHHHHh
Q 001052 95 EGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPGFIMSMYSLLRS 144 (1172)
Q Consensus 95 ~g~~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG~vm~~~~ll~~ 144 (1172)
+|..|.|.|+.. . ..-+.+++.|...|..+|++|.++..+.+..+...
T Consensus 68 ~gm~V~T~~~~~-~-~~r~~~lelll~~h~~~C~~C~~~~~C~Lq~~a~~ 115 (574)
T 3c8y_A 68 DGMIINTNSDAV-N-EKIKSRISQLLDIHEFKCGPCNRRENCEFLKLVIK 115 (574)
T ss_dssp TTCEEESSCHHH-H-HHHHHHHHHHHTTSCCCCTTCTTTTSCHHHHHHHH
T ss_pred cceeEEecchhh-h-hhHHHHHHHHHhccCCCCCcCCCCcchHHHHHHHH
Confidence 899999999986 2 23367999999999999999999988777776543
No 27
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.70 E-value=9.1e-09 Score=114.05 Aligned_cols=67 Identities=16% Similarity=0.255 Sum_probs=58.1
Q ss_pred EEEecCCCC-CCcHHHHHhhC----C-CCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCceEEEe
Q 001052 29 RKVLPDGLA-HLTLLEYLRDI----G-LTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1172)
Q Consensus 29 ~~~~~~~~p-~~~L~~~LR~~----~-l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T~ 102 (1172)
.++++ +++ ++||||.||+. + ..++|.||++|.||+|+|+||| +++.||++++....| +++||
T Consensus 56 ~~~v~-v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~InG----------~~~laC~t~v~~~~~-~~~tI 123 (282)
T 3vr8_B 56 KFDVD-LDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAG----------ENTLACICNIDQNTS-KTTKI 123 (282)
T ss_pred EEEEE-eCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEECC----------EEecchhhhHhHhcC-CcEEe
Confidence 56775 787 99999999962 3 4899999999999999999997 689999999987666 78999
Q ss_pred ecccC
Q 001052 103 EGVGN 107 (1172)
Q Consensus 103 Egl~~ 107 (1172)
|||.+
T Consensus 124 epL~~ 128 (282)
T 3vr8_B 124 YPLPH 128 (282)
T ss_pred ccCCC
Confidence 99974
No 28
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.59 E-value=4.7e-08 Score=106.60 Aligned_cols=67 Identities=21% Similarity=0.336 Sum_probs=58.5
Q ss_pred EEEEecCCCC--CCcHHHHHhhC----CCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhc--cCCceE
Q 001052 28 LRKVLPDGLA--HLTLLEYLRDI----GLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYS--LEGMHV 99 (1172)
Q Consensus 28 ~~~~~~~~~p--~~~L~~~LR~~----~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~--~~g~~i 99 (1172)
+.++++ +++ ++|||+.||+. +..+++.||++|.||+|+|.||| +++.||.+++.. ++|.+
T Consensus 21 ~~~~v~-~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v~G----------~~~laC~~~~~~~g~~~~~- 88 (238)
T 2wdq_B 21 QDYTLE-ADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNMNG----------KNGLACITPISALNQPGKK- 88 (238)
T ss_dssp EEEEEE-CCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGTCCTTSC-
T ss_pred EEEEee-cCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEECC----------EEEcccccchhhhccCCCC-
Confidence 456665 788 99999999973 67899999999999999999987 678899999998 77777
Q ss_pred EEeeccc
Q 001052 100 ITVEGVG 106 (1172)
Q Consensus 100 ~T~Egl~ 106 (1172)
+|||+|.
T Consensus 89 ~~ie~l~ 95 (238)
T 2wdq_B 89 IVIRPLP 95 (238)
T ss_dssp EEEECCT
T ss_pred EEEeeCC
Confidence 8999996
No 29
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.58 E-value=4.7e-08 Score=107.57 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=58.9
Q ss_pred EEEEecCCCC-CCcHHHHHhhCC-----CCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCceEEE
Q 001052 28 LRKVLPDGLA-HLTLLEYLRDIG-----LTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVIT 101 (1172)
Q Consensus 28 ~~~~~~~~~p-~~~L~~~LR~~~-----l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T 101 (1172)
+.++++ +++ ++||||.||+.+ ..+.+.+|.+|.||+|+|.||| +++.||.+++..++|. ++|
T Consensus 31 ~~~~v~-~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G----------~~~~aC~~~~~~~~g~-~~~ 98 (252)
T 2h88_B 31 QTYEVD-LNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAG----------GNTLACTKKIDPDLSK-TTK 98 (252)
T ss_dssp EEEEEE-GGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETT----------EEEEGGGSBCCCCTTS-CEE
T ss_pred EEEEEe-cCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECC----------cEEccccCCHhHcCCC-ceE
Confidence 566775 777 999999999742 5689999999999999999997 5789999999999887 899
Q ss_pred eecccC
Q 001052 102 VEGVGN 107 (1172)
Q Consensus 102 ~Egl~~ 107 (1172)
||+|.+
T Consensus 99 iepl~~ 104 (252)
T 2h88_B 99 IYPLPH 104 (252)
T ss_dssp EECSTT
T ss_pred EecccC
Confidence 999973
No 30
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.40 E-value=3e-07 Score=100.38 Aligned_cols=68 Identities=22% Similarity=0.325 Sum_probs=58.2
Q ss_pred EEEEecCCCCCCcHHHHHhhC----CCC-CcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCceEEEe
Q 001052 28 LRKVLPDGLAHLTLLEYLRDI----GLT-GTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1172)
Q Consensus 28 ~~~~~~~~~p~~~L~~~LR~~----~l~-g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T~ 102 (1172)
+.++++ +++++|||+.||.. +.+ +.+.+|.+|.||+|+|.||| +++.||.+++..++| +++||
T Consensus 24 ~~~~v~-~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~G----------~~~~aC~~~~~~~~g-~~~~i 91 (241)
T 2bs2_B 24 QEYKIE-EAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMING----------RPSLACRTLTKDFED-GVITL 91 (241)
T ss_dssp EEEEEE-CCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETT----------EEEEGGGCBGGGCTT-SEEEE
T ss_pred EEEEEe-CCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEECC----------CeecchhCcHhHcCC-CeEEE
Confidence 456675 88999999999962 343 78999999999999999986 678999999999988 78999
Q ss_pred ecccC
Q 001052 103 EGVGN 107 (1172)
Q Consensus 103 Egl~~ 107 (1172)
|+|.+
T Consensus 92 e~l~~ 96 (241)
T 2bs2_B 92 LPLPA 96 (241)
T ss_dssp ECCTT
T ss_pred ecCCC
Confidence 99973
No 31
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.22 E-value=6.1e-07 Score=98.08 Aligned_cols=66 Identities=26% Similarity=0.320 Sum_probs=55.5
Q ss_pred EEEEecCCCCCCcHHHHHhhCC-----CCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccCCceEEEe
Q 001052 28 LRKVLPDGLAHLTLLEYLRDIG-----LTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLEGMHVITV 102 (1172)
Q Consensus 28 ~~~~~~~~~p~~~L~~~LR~~~-----l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~g~~i~T~ 102 (1172)
+.++++ +++++|||+.||+.| ..+.+.+|+.|.||+|+|.||| +++.||.+++....| ++||
T Consensus 24 ~~~~~~-~~~~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G----------~~~~aC~~~~~~~~~--~~~i 90 (243)
T 1kf6_B 24 AFYEVP-YDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNN----------VPKLACKTFLRDYTD--GMKV 90 (243)
T ss_dssp EEEEEE-ECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETT----------EEEEGGGCBGGGCTT--CEEE
T ss_pred EEEEEe-cCCCChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECC----------EEEeeeeeEHhhCCC--cEEE
Confidence 345664 789999999999754 2478999999999999999986 689999999988765 5899
Q ss_pred eccc
Q 001052 103 EGVG 106 (1172)
Q Consensus 103 Egl~ 106 (1172)
|+|.
T Consensus 91 ~~l~ 94 (243)
T 1kf6_B 91 EALA 94 (243)
T ss_dssp ECCT
T ss_pred EecC
Confidence 9986
No 32
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=98.21 E-value=3.6e-06 Score=77.89 Aligned_cols=51 Identities=24% Similarity=0.366 Sum_probs=47.0
Q ss_pred EEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEec
Q 001052 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1172)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1172)
+|+|++||+.++++ ++++++||+.|++.|+.|.+.+|+ .|.||+|.|.|..
T Consensus 2 ~v~i~~~g~~~~~~-~~~g~tll~a~~~~gi~gi~~~C~G~G~Cg~C~v~v~~ 53 (93)
T 1l5p_A 2 TITAVKGGVKKQLK-FEDDQTLFTVLTEAGLMSADDTCQGNKACGKCICKHVS 53 (93)
T ss_dssp EEEEEETTEEEEEE-CCTTEEHHHHHHTTTSSCCTTSCSSSSSSCCCEEEEEE
T ss_pred eEEEEeCCcEEEEE-ECCCChHHHHHHHcCCCcCCcCCCCcCCcCCCEEEECC
Confidence 57799999988886 899999999999999999999999 9999999999864
No 33
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=98.01 E-value=1.2e-05 Score=91.91 Aligned_cols=162 Identities=15% Similarity=0.123 Sum_probs=110.2
Q ss_pred ccccCCCCceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecC-CcEEEc
Q 001052 263 LNLSGFGGLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKD-DGLEIG 337 (1172)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~-~~l~IG 337 (1172)
+.+++ ....+++|+|.+|+.++++. + -...+++|||++.+.- . ....+|+++ +.++..|+.++ ..+++|
T Consensus 9 ~~igg-~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d--~--~~GvVI~l~-~~~i~~i~~~~~~~v~vg 82 (340)
T 1uxy_A 9 FGIDH-NAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLE--D--YRGTVIINR-IKGIEIHDEPDAWYLHVG 82 (340)
T ss_dssp TCCCC-BEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECS--C--EEEEEEEEC-CCCEEEEECSSEEEEEEE
T ss_pred CCCCc-cccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccC--C--CCeEEEEcc-CCCcEEEecCCCeEEEEe
Confidence 34444 34568899999999888764 2 3578899999998842 2 246899995 66666665555 579999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcCCEEEEEeC-CC
Q 001052 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASGAKFHIVDC-KG 416 (1172)
Q Consensus 338 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~A~v~l~s~-~g 416 (1172)
|++++.+|.+.+.+. .+... ..+..+. ..+|+..++|.|+-|++++.. + -.|++... +|
T Consensus 83 AG~~~~~l~~~~~~~--Gl~Gl--e~~~gIP---GtVGGa~~~NaGayG~ei~d~------v-------~~v~vv~~~~G 142 (340)
T 1uxy_A 83 AGENWHRLVKYTLQE--GMPGL--ENLALIP---GCVGSSPIQNIGAYGVELQRV------C-------AYVDSVELATG 142 (340)
T ss_dssp TTSBHHHHHHHHHHT--TCCSC--GGGTTCC---SBGGGTTTTTCEETTEEGGGT------E-------EEEEEEETTTT
T ss_pred cCCCHHHHHHHHHHC--CCCcc--ccccCCc---cchhHHHHhccccchhhHHhh------e-------eEEEEEECCCC
Confidence 999999999875321 11100 0011111 246677777777777665543 1 12777775 77
Q ss_pred CeEEEehHhhhcccccccCCC----CeEEEEEEccCCC
Q 001052 417 NIRTTMAEEFFLGYRKVDLTS----GEILLSIFLPWTR 450 (1172)
Q Consensus 417 ~~R~vpl~dF~~g~~~t~L~~----~Eil~~I~iP~~~ 450 (1172)
..++++-+|++-||+...++. ..||+++.+...+
T Consensus 143 ~v~~~~~~d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~ 180 (340)
T 1uxy_A 143 KQVRLTAKECRFGYRDSIFKHEYQDRFAIVAVGLRLPK 180 (340)
T ss_dssp EEEEEETGGGTCBTTBCGGGTTTTTTEEEEEEEEEEES
T ss_pred cEEEEeHHHhccccCcCccCCcCCCCEEEEEEEEEEEc
Confidence 568999999999999987754 6799999887653
No 34
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=98.00 E-value=8.9e-06 Score=92.66 Aligned_cols=152 Identities=16% Similarity=0.225 Sum_probs=104.7
Q ss_pred ceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHHH
Q 001052 271 LKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELL 346 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~ 346 (1172)
..+++|+|.+|+.++++. + -...+++|||++...-. . ....+||+++ |+.|+.+++.+++||++++.+|.
T Consensus 50 ~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~--~-~~gvvI~l~~---m~~i~id~~~v~v~aGv~~~~l~ 123 (326)
T 1hsk_A 50 DFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREG--G-IRGIVISLLS---LDHIEVSDDAIIAGSGAAIIDVS 123 (326)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTT--C-EEEEEEECTT---CCCEEEETTEEEEETTSBHHHHH
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCC--C-CCeEEEEeCC---CCceEEcCCEEEEeCCCcHHHHH
Confidence 468999999999887764 3 35788999999975321 1 1367899986 66776677899999999999999
Q ss_pred HHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccc-cCCCC-ChhHHHHhcCCEEEEEeCCCCeEEEehH
Q 001052 347 KMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICT-ASPIS-DLNPLWMASGAKFHIVDCKGNIRTTMAE 424 (1172)
Q Consensus 347 ~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~-asp~s-D~~~~Llal~A~v~l~s~~g~~R~vpl~ 424 (1172)
+.+.+.=- + . +..++.. -+||||++++ +...+ .+.=.++ .+++...+|..++++-+
T Consensus 124 ~~l~~~Gl--~--------g----Le~~~~~----PgtvGG~i~~naggyG~~~~d~v~----~v~vv~~~G~i~~~~~~ 181 (326)
T 1hsk_A 124 RVARDYAL--T--------G----LEFACGI----PGSIGGAVYMNAGAYGGEVKDCID----YALCVNEQGSLIKLTTK 181 (326)
T ss_dssp HHHHHTTE--E--------S----CGGGTTC----CSBHHHHHHHTCEETTEEHHHHEE----EEEEECTTSCEEEEETT
T ss_pred HHHHHCCC--c--------c----ccccCCC----cchhhHHHhcccccCchhhhhhEE----EEEEEeCCCCEEEEChH
Confidence 88643210 0 0 0011111 1589999974 43333 3332222 45677778867888989
Q ss_pred hhhcccccccCC-CCeEEEEEEccCCC
Q 001052 425 EFFLGYRKVDLT-SGEILLSIFLPWTR 450 (1172)
Q Consensus 425 dF~~g~~~t~L~-~~Eil~~I~iP~~~ 450 (1172)
+++.||+.+.|. .+.|||++.+...+
T Consensus 182 ~~~~gyr~~~l~s~ggIIt~~~l~l~p 208 (326)
T 1hsk_A 182 ELELDYRNSIIQKEHLVVLEAAFTLAP 208 (326)
T ss_dssp TTTCBTTBCHHHHTTCEEEEEEEECEE
T ss_pred HcCCCccccccCCCCEEEEEEEEEEEc
Confidence 999999987774 36899999987653
No 35
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=97.66 E-value=4e-05 Score=72.14 Aligned_cols=52 Identities=15% Similarity=0.329 Sum_probs=45.3
Q ss_pred ceEEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEec
Q 001052 18 TKEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1172)
Q Consensus 18 ~~~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1172)
...|+|. .||+.++++ ++++++||+.|++.|+. ++.+|+ .|.||.|.|.|.+
T Consensus 3 ~~~v~~~~~~g~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 3 GIKVFFVTPEGREIMIE-GNEGDSILDLAHANNID-LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp CEEEEEECTTCCEEEEE-ECTTCBHHHHHHHTTCC-CCCTTTTSSCCSTTEEEECH
T ss_pred ceEEEEEeCCCCEEEEE-ECCCCHHHHHHHHcCCC-cCcCCCCCCCcCCCEEEECC
Confidence 3578888 899777775 78999999999999988 999999 7999999999864
No 36
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=97.64 E-value=5.6e-05 Score=70.52 Aligned_cols=51 Identities=16% Similarity=0.252 Sum_probs=43.4
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE-ec
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV-SR 71 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~-~~ 71 (1172)
..|+|.+||...+++ ++++++||+.|++.|+ .++.+|+.|.||.|.|.| ++
T Consensus 3 ~~v~~~~~~~~~~~~-~~~g~tlL~a~~~~gi-~i~~~C~~G~Cg~C~v~v~~G 54 (98)
T 1iue_A 3 YNITLRTNDGEKKIE-CNEDEYILDASERQNV-ELPYSCRGGSCSTCAAKLVEG 54 (98)
T ss_dssp EEEEEEETTEEEEEE-EETTSCHHHHHHHTTC-CCCCSSCSSSSSTTEEEEEES
T ss_pred EEEEEEeCCCeEEEE-eCCCCcHHHHHHHcCC-CCCCCCCCCcCCCCEEEEeeC
Confidence 368888898655664 7799999999999998 699999999999999987 44
No 37
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=97.59 E-value=7.3e-05 Score=69.60 Aligned_cols=50 Identities=14% Similarity=0.308 Sum_probs=42.5
Q ss_pred EEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE-ec
Q 001052 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV-SR 71 (1172)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~-~~ 71 (1172)
+|+|..+|...+++ ++++++||+.|++.|+. ++.+|+.|.||.|.|.| ++
T Consensus 4 ~v~~~~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~~G~Cg~C~v~v~~G 54 (97)
T 1a70_A 4 KVTLVTPTGNVEFQ-CPDDVYILDAAEEEGID-LPYSCRAGSCSSCAGKLKTG 54 (97)
T ss_dssp EEEEEETTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSSSSCSSTTEEEEEES
T ss_pred EEEEEeCCceEEEE-eCCCCcHHHHHHHcCCC-cccCCCCcCCCCCeEEEccC
Confidence 57888776555665 78999999999999987 99999999999999987 44
No 38
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.57 E-value=9.3e-05 Score=68.48 Aligned_cols=77 Identities=19% Similarity=0.288 Sum_probs=53.1
Q ss_pred eEEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEe-cc-ccCCCc------ccceeeccccc
Q 001052 19 KEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS-RY-DKKSKK------CVHCAVNACLA 89 (1172)
Q Consensus 19 ~~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~-~~-~~~~~~------~~~~~v~sCl~ 89 (1172)
.+|+|. .|| ..+++ ++++++||+.|++.|+. ...+|+.|.||.|.|.|. +. +..... .....+.+|..
T Consensus 2 ~~v~~~~~~g-~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~ 78 (95)
T 1frr_A 2 YKTVLKTPSG-EFTLD-VPEGTTILDAAEEAGYD-LPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIA 78 (95)
T ss_dssp EEEEEEETTE-EEEEE-ECTTCCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTC
T ss_pred eEEEEEeCCC-cEEEE-eCCCCcHHHHHHHcCCC-CCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeEC
Confidence 367886 788 44554 67999999999999984 899999999999999886 31 111110 01124778988
Q ss_pred chhccCCceEE
Q 001052 90 PLYSLEGMHVI 100 (1172)
Q Consensus 90 ~~~~~~g~~i~ 100 (1172)
.+. .+..|.
T Consensus 79 ~~~--~~~~v~ 87 (95)
T 1frr_A 79 IPE--SDLVIE 87 (95)
T ss_dssp EES--SCEEEE
T ss_pred EEC--CCEEEE
Confidence 754 354444
No 39
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=97.54 E-value=0.00014 Score=67.28 Aligned_cols=50 Identities=20% Similarity=0.366 Sum_probs=41.9
Q ss_pred EEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE-ec
Q 001052 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV-SR 71 (1172)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~-~~ 71 (1172)
+|+|..++...+++ ++++++||+.|++.|+ ..+.+|+.|.||.|.|.| ++
T Consensus 2 ~v~~~~~~g~~~~~-~~~g~tlL~a~~~~gi-~i~~~C~~G~Cg~C~v~v~~G 52 (94)
T 1awd_A 2 KVTLKTPSGEETIE-CPEDTYILDAAEEAGL-DLPYSCRAGACSSCAGKVESG 52 (94)
T ss_dssp EEEEEETTEEEEEE-CCTTSCHHHHHHHTTC-CCCCSSSSSSSSTTEEEEEES
T ss_pred EEEEEeCCCcEEEE-ECCCCcHHHHHHHcCC-CCCcCCCCCcCCCCEEEEEeC
Confidence 57787655455665 8899999999999998 599999999999999988 44
No 40
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=97.51 E-value=4.8e-05 Score=70.97 Aligned_cols=50 Identities=14% Similarity=0.254 Sum_probs=42.8
Q ss_pred EEEEEEC---CEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE-ec
Q 001052 20 EAILYVN---GLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV-SR 71 (1172)
Q Consensus 20 ~i~~~~N---g~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~-~~ 71 (1172)
.+++++| |...+++ ++++++||+.||+.|+. .+.+|+.|.||+|.|.| ++
T Consensus 4 ~~~v~~~~~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~~G~Cg~C~v~v~~G 57 (98)
T 1jq4_A 4 VHTITAVTEDGESLRFE-CRSDEDVITAALRQNIF-LMSSCREGGCATCKALCSEG 57 (98)
T ss_dssp EEEEEEEETTTEEEEEE-EESCCTHHHHHHHHTCC-CCCSCCSSCCCCCCBCEEEC
T ss_pred cEEEEEEecCCCcEEEE-eCCCChHHHHHHHcCCC-CcCCCCCCCCCCCEEEEEcC
Confidence 4667778 7777775 78999999999999988 99999999999999987 44
No 41
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=97.50 E-value=0.00011 Score=67.74 Aligned_cols=48 Identities=15% Similarity=0.214 Sum_probs=41.9
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV 69 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~ 69 (1172)
..|+|..||..++++ ++++++||+.|++.| ..+.+|+.|.||.|.|.|
T Consensus 2 ~~V~~~~~~~~~~~~-~~~g~tlL~a~~~~g--~i~~~C~~G~Cg~C~v~v 49 (93)
T 1wri_A 2 YKVTLKTPDGDITFD-VEPGERLIDIGSEKA--DLPLSCQAGACSTCLGKI 49 (93)
T ss_dssp EEEEEEETTEEEEEE-ECTTSCHHHHHHHHS--CCCCSSSSSSSSTTEEEE
T ss_pred EEEEEEECCCeEEEE-ECCCCcHHHHHHHCc--CCCCCCCCCCCCCCEEEE
Confidence 367888888656665 789999999999989 899999999999999987
No 42
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=97.44 E-value=0.00016 Score=67.33 Aligned_cols=50 Identities=18% Similarity=0.305 Sum_probs=41.2
Q ss_pred eEEEEEECCE--EEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEe
Q 001052 19 KEAILYVNGL--RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1172)
Q Consensus 19 ~~i~~~~Ng~--~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1172)
..|+|..|+. ..+++ ++++++||+.|++.|+. ...+|+.|.||.|.|.|.
T Consensus 3 ~~V~~~~~~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~~G~Cg~C~v~v~ 54 (98)
T 1frd_A 3 YQVRLINKKQDIDTTIE-IDEETTILDGAEENGIE-LPFSCHSGSCSSCVGKVV 54 (98)
T ss_dssp EEEEEEETTTTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEEE
T ss_pred eEEEEEeCCCCCCEEEE-eCCCCcHHHHHHHcCCC-cccCCCCCCCCCCEEEEE
Confidence 3678888542 45554 67899999999999986 899999999999999883
No 43
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=97.21 E-value=0.00037 Score=65.69 Aligned_cols=80 Identities=26% Similarity=0.454 Sum_probs=58.1
Q ss_pred EEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEecc--cc---C--------C--Ccccce
Q 001052 20 EAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSRY--DK---K--------S--KKCVHC 82 (1172)
Q Consensus 20 ~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~~--~~---~--------~--~~~~~~ 82 (1172)
+|+|. .||+.++++ +.++++||+.|++.|+.|....|+ .|.||.|.|.|..- +. . + ....--
T Consensus 2 ~vt~~~~~G~~~~~~-~~~g~tll~a~~~~gi~~i~~~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~g 80 (104)
T 3lxf_A 2 AILVTTRDGTRTEIQ-AEPGLSLMEALRDAGIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTPH 80 (104)
T ss_dssp EEEEECTTSCEEEEE-CCTTSBHHHHHHHTTCTTCCCTTCSSSSCSTTEEEECGGGGGGSCCCCHHHHHHHHTSTTCCTT
T ss_pred EEEEEeCCCCEEEEE-ECCCChHHHHHHHcCCCCCCcCCCCCCCCCCCEEEECCcccccCCCCCHHHHHHhccccccCCC
Confidence 45554 589988886 899999999999999999999998 89999999987541 10 0 0 112223
Q ss_pred eecccccchh-ccCCceEE
Q 001052 83 AVNACLAPLY-SLEGMHVI 100 (1172)
Q Consensus 83 ~v~sCl~~~~-~~~g~~i~ 100 (1172)
.+.+|.+.+. .++|..|.
T Consensus 81 ~rLaCq~~~~~dl~gl~v~ 99 (104)
T 3lxf_A 81 SRLSCQITINDKLEGLEVE 99 (104)
T ss_dssp EEEGGGCBCCGGGTTCEEE
T ss_pred cEEEeeCEEccCCCCEEEE
Confidence 4677877654 46777664
No 44
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=97.16 E-value=0.00038 Score=64.79 Aligned_cols=48 Identities=15% Similarity=0.332 Sum_probs=39.4
Q ss_pred EEEEEECCE--EEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE
Q 001052 20 EAILYVNGL--RKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV 69 (1172)
Q Consensus 20 ~i~~~~Ng~--~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~ 69 (1172)
.|+|..++. ..+++ ++++++||+.|++.|+. +..+|+.|.||.|.|.|
T Consensus 4 ~V~~~~~~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~~G~Cg~C~v~v 53 (98)
T 1czp_A 4 KVTLINEAEGTKHEIE-VPDDEYILDAAEEQGYD-LPFSCRAGACSTCAGKL 53 (98)
T ss_dssp EEEEEETTTTEEEEEE-EETTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEE
T ss_pred EEEEEeCCCCCcEEEE-eCCCCCHHHHHHHcCCC-ccCCCCCCCCCCCeEEE
Confidence 567766432 34554 67899999999999987 99999999999999987
No 45
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=97.15 E-value=0.00035 Score=68.15 Aligned_cols=82 Identities=17% Similarity=0.282 Sum_probs=59.3
Q ss_pred ceEEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEecc--c---cC--------C--Cccc
Q 001052 18 TKEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSRY--D---KK--------S--KKCV 80 (1172)
Q Consensus 18 ~~~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~~--~---~~--------~--~~~~ 80 (1172)
+.+|+|. .+|+..+++ +.++++||+.|++.|+.|....|+ .|.||.|.|.|..- + +. + ..+.
T Consensus 21 M~~Vt~~~~~G~~~~v~-~~~G~tLL~aa~~~gi~gi~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e~~ 99 (126)
T 3hui_A 21 MAKINFVDHTGETRTVE-VEEGATVMEAAIRNAIPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVR 99 (126)
T ss_dssp EEEEEEECTTSCEEEEE-EETTSBHHHHHHTTTCTTCCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSSCC
T ss_pred ceEEEEEeCCCCEEEEE-ECCCCcHHHHHHHcCCCCCccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhhcc
Confidence 5578887 789777775 789999999999999999999998 89999999987541 1 00 0 1122
Q ss_pred ceeecccccchh-ccCCceEE
Q 001052 81 HCAVNACLAPLY-SLEGMHVI 100 (1172)
Q Consensus 81 ~~~v~sCl~~~~-~~~g~~i~ 100 (1172)
--...+|.+.+. .++|..|.
T Consensus 100 ~g~RLaCQ~~~~~dldgl~V~ 120 (126)
T 3hui_A 100 PNSRLSCQIKVSNELDGLIVT 120 (126)
T ss_dssp TTEEEGGGCBCCGGGTTEEEE
T ss_pred CCeEEeeeCEECcCCCcEEEE
Confidence 234678877654 35676554
No 46
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=97.10 E-value=0.00043 Score=65.41 Aligned_cols=51 Identities=22% Similarity=0.436 Sum_probs=43.9
Q ss_pred EEEE-EECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEec
Q 001052 20 EAIL-YVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1172)
Q Consensus 20 ~i~~-~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1172)
+|+| ..||+..+++ +.++++||+.+++.|+.|....|+ .|.||.|.|.|..
T Consensus 2 ~V~~~~~~g~~~~~~-~~~g~tlLeaa~~~gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1xlq_A 2 KVVYVSHDGTRRELD-VADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNE 54 (106)
T ss_dssp EEEEECTTSCEEEEE-CCTTCBHHHHHHHTTCTTSCCTTCSSSSSCTTEEEECT
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHcCCCCCCcCCCCCcccCcCEEEECC
Confidence 5777 5799766775 889999999999999999999995 8999999998854
No 47
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=97.10 E-value=0.00051 Score=65.47 Aligned_cols=50 Identities=18% Similarity=0.334 Sum_probs=39.7
Q ss_pred eEEEEEEC-C---EEEEecCCCCCCcHHHHHhhCCCCCcccCc-cCCCCCceEEEEe
Q 001052 19 KEAILYVN-G---LRKVLPDGLAHLTLLEYLRDIGLTGTKLGC-GEGGCGACTVMVS 70 (1172)
Q Consensus 19 ~~i~~~~N-g---~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC-~~G~CGaCtV~~~ 70 (1172)
.+|+|..| | ...+++ ++++++||+.|++.|+. ...+| +.|.||.|.|.|.
T Consensus 2 ~~i~~~~~~g~~~~~~~~~-~~~g~tlL~a~~~~gi~-i~~~C~~~G~Cg~C~v~v~ 56 (111)
T 1i7h_A 2 PKIVILPHQDLCPDGAVLE-ANSGETILDAALRNGIE-IEHACEKSCACTTCHCIVR 56 (111)
T ss_dssp CEEEECCBTTTBTTCEEEE-CCTTCBHHHHHHHTTCC-CCCTTSSSSCCSTTEEEEE
T ss_pred CEEEEEeCCCcCCCCeEEE-eCCCCcHHHHHHHcCCC-CcccCCCCCcCCCCEEEEc
Confidence 36888873 2 223443 67899999999999987 89999 5999999999885
No 48
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=97.06 E-value=0.00051 Score=64.88 Aligned_cols=51 Identities=31% Similarity=0.574 Sum_probs=43.6
Q ss_pred EEEE-EECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEec
Q 001052 20 EAIL-YVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1172)
Q Consensus 20 ~i~~-~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1172)
+|+| ..||+..+++ +.++++||+.+++.|+.|....|+ .|.||.|.|.|..
T Consensus 2 ~v~~~~~~g~~~~~~-~~~g~tlL~aa~~~gi~~i~~~C~g~G~CgtC~v~v~~ 54 (106)
T 1uwm_A 2 KIIFIEHNGTRHEVE-AKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYVDP 54 (106)
T ss_dssp EEEEECTTCCEEEEE-CCTTSBHHHHHHTTTCTTCCCTTSSSSSSCTTEEEECH
T ss_pred EEEEEeCCCCEEEEE-ECCCCcHHHHHHHcCCCCcccCCCCCCCcCcCEEEECC
Confidence 5777 4789666775 789999999999999999999995 8999999998754
No 49
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=96.85 E-value=0.0022 Score=72.66 Aligned_cols=151 Identities=12% Similarity=0.185 Sum_probs=92.1
Q ss_pred CceEEecCCHHHHHHHHh---hC-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKS---KY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~---~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
...+++|+|.+|+.++++ ++ -...+++|||.+.+.- . .....+||+++ |+.|..+++.+++||++++.+|
T Consensus 55 p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~--~-~~~gvvI~l~~---~~~I~~d~~~v~v~aG~~~~~l 128 (322)
T 3tx1_A 55 ADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKD--G-GIRGVILHLDL---LQTIERNNTQIVAMSGAKLIDT 128 (322)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECT--T-CEEEEEEECTT---CCCEEEETTEEEEETTSBHHHH
T ss_pred eeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCC--C-CCCeEEEECCC---CCcEEECCCEEEEecCcCHHHH
Confidence 457899999999877664 33 2478899999997521 1 12357899974 6677778889999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc-CCC-CChhHHHHhcCCEEEEEeCCCCeEEEeh
Q 001052 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA-SPI-SDLNPLWMASGAKFHIVDCKGNIRTTMA 423 (1172)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a-sp~-sD~~~~Llal~A~v~l~s~~g~~R~vpl 423 (1172)
.+.+.+.=-. + +...++. -+||||++++. .-. +.+.-.+ -.+++...+|..++++-
T Consensus 129 ~~~l~~~Gl~-G-------------le~~~gi----PgTVGGav~~NaGgyGg~~~d~v----~~vevV~~~G~i~~~~~ 186 (322)
T 3tx1_A 129 AKFALNESLS-G-------------LEFACGI----PGSIGGALHMNAGAYGGEISDVL----EAATVLTQTGELKKLKR 186 (322)
T ss_dssp HHHHHHTTEE-S-------------CGGGTTC----CSBHHHHHHHTCEETTEEHHHHE----EEEEEECTTSCEEEEEG
T ss_pred HHHHHHcCCc-c-------------cccCCCC----cchhHHHHHhCccCcccchHhhE----EEEEEEcCCCCEEEech
Confidence 9886432100 0 0011222 28999999743 222 1222211 13455555665666776
Q ss_pred HhhhcccccccCC-CCeEEEEEEccC
Q 001052 424 EEFFLGYRKVDLT-SGEILLSIFLPW 448 (1172)
Q Consensus 424 ~dF~~g~~~t~L~-~~Eil~~I~iP~ 448 (1172)
+|.+-+|+...+. .+.|||++.+..
T Consensus 187 ~~~~~~yR~s~~g~~~~IIt~~tl~L 212 (322)
T 3tx1_A 187 SELKAAYRFSTIAEKNYIVLDATFSL 212 (322)
T ss_dssp GGCC--CC-CTTTGGGCEEEEEEEEC
T ss_pred HHcCcchhhcccCCCCEEEEEEEEEE
Confidence 7766566665554 245676666544
No 50
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=96.72 E-value=0.005 Score=70.54 Aligned_cols=154 Identities=10% Similarity=0.101 Sum_probs=97.4
Q ss_pred CccccCCCCceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeec----CCc
Q 001052 262 PLNLSGFGGLKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK----DDG 333 (1172)
Q Consensus 262 ~~~~~~~~~~~~~~P~sl~eal~ll~~~----~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~----~~~ 333 (1172)
++.+++ ....+++|+|.+|+.++++.. -...+++|||.+.+.-. ....+|+++ |+.|+.+ +..
T Consensus 24 t~~igg-~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~----~~GvVI~l~----~~~i~v~~~~~~~~ 94 (357)
T 3i99_A 24 TFGIEQ-LAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH----YTGMIVVNR----LNGIEHQQDDDYHR 94 (357)
T ss_dssp TTCCSC-EEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC----EEEEEEEEC----CCCEEEEECSSEEE
T ss_pred cCCCCc-cceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC----CCeEEEEcC----CCceEEeccCCceE
Confidence 344444 345789999999999988653 14678999999876322 235788885 4555543 236
Q ss_pred EEEcccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC-----CCChhHHHHhcCCE
Q 001052 334 LEIGAAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP-----ISDLNPLWMASGAK 408 (1172)
Q Consensus 334 l~IGA~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp-----~sD~~~~Llal~A~ 408 (1172)
+++||++++.+|.+.+.+. .+. -+...++.. |||||+++.-.- .+|.+ -.
T Consensus 95 v~v~AG~~~~~l~~~a~~~--Gl~------------GlE~l~gIP----GtVGGav~~NaGaYG~e~~d~v-------~~ 149 (357)
T 3i99_A 95 LHVAGGEDWPSLVSWCVEQ--GIG------------GLENLALIP----GCAGSAPIQNIGAYGVEFKDVC-------DY 149 (357)
T ss_dssp EEEETTSBHHHHHHHHHHT--TCT------------TCGGGTTCC----SBGGGTTTTTCEETTEEGGGTE-------EE
T ss_pred EEEeCCCcHHHHHHHHHHc--CCc------------CccccCCCC----chhHHHHHhchhhhhhhHHhhE-------eE
Confidence 9999999999999875321 110 011122222 799999975322 12222 13
Q ss_pred EEEEeC-CCCeEEEehHhhhcccccccCC----CCeEEEEEEccCC
Q 001052 409 FHIVDC-KGNIRTTMAEEFFLGYRKVDLT----SGEILLSIFLPWT 449 (1172)
Q Consensus 409 v~l~s~-~g~~R~vpl~dF~~g~~~t~L~----~~Eil~~I~iP~~ 449 (1172)
|++... +|..++++-+|.+-+|+...++ ...||+++.+...
T Consensus 150 vevv~~~~G~i~~~~~~dl~f~YR~s~~~~~~g~~gIIt~v~f~L~ 195 (357)
T 3i99_A 150 VEYLCLETGTVKRLTMEECQFGYRDSIFKHQLYQKAVVTAVGLKFA 195 (357)
T ss_dssp EEEEETTTTEEEEEETGGGCCBTTBCGGGTTTTTTEEEEEEEEEEE
T ss_pred EEEEECCCCcEEEEeHHHcCcccccccCCCccCCCEEEEEEEEEEE
Confidence 566665 6656778878877788876654 2457777766443
No 51
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=96.68 E-value=0.0006 Score=64.27 Aligned_cols=51 Identities=16% Similarity=0.341 Sum_probs=43.3
Q ss_pred EEEE-EECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEec
Q 001052 20 EAIL-YVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVSR 71 (1172)
Q Consensus 20 ~i~~-~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~~ 71 (1172)
+|+| ..+|+..+++ +.++++||+.+++.|+.|....|+ .|.||.|.|-|..
T Consensus 2 ~V~~~~~~g~~~~~~-~~~g~tlL~aa~~~gi~~i~~~C~g~G~CgtC~v~v~~ 54 (105)
T 1b9r_A 2 RVVFIDEQSGEYAVD-AQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIED 54 (105)
T ss_dssp EEEECCTTTSCEEEE-CCTTCCTTHHHHHHTCCCCCCSSTTSSCCCCCCCEECT
T ss_pred EEEEEeCCCCEEEEE-ECCCChHHHHHHHcCCCCcCcCCCCCCCcCcCEEEECC
Confidence 5677 5789656665 789999999999999999999998 6999999998854
No 52
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=96.54 E-value=0.002 Score=71.08 Aligned_cols=151 Identities=17% Similarity=0.223 Sum_probs=95.6
Q ss_pred ccccCCCCceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccH
Q 001052 263 LNLSGFGGLKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRL 342 (1172)
Q Consensus 263 ~~~~~~~~~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl 342 (1172)
+.+++ ... +++|+|.+|+.+++ .-...+++|||.+.+. ........+|++++ |+.|+.+ + ++||++++
T Consensus 17 ~~igg-~a~-vv~p~s~edv~~~v--~ipv~v~GgGsnll~~--d~~~~~GvVI~l~~---~~~I~vd-~--~v~aG~~~ 84 (268)
T 2gqt_A 17 LGVGG-PAE-LWTVETREELKRAT--EAPYRVLGNGSNLLVL--DEGVPERVIRLAGE---FQTYDLK-G--WVGAGTLL 84 (268)
T ss_dssp SCCCC-EEE-EEEECSHHHHHHHT--TSCEEECSSSSSEEEC--TTCCSSEEEEECGG---GGCBCTT-S--EEETTSBH
T ss_pred cccCc-ceE-EEEeCCHHHHHHHh--CCCeEEcCCCcCceec--CCCcCCeEEEEcCC---CCCcEEc-C--EEECCCCH
Confidence 34444 234 99999999999988 3347889999998762 11111157899864 5666654 3 99999999
Q ss_pred HHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC-CC-ChhHHHHhcCCEEEEEeCCCCeEE
Q 001052 343 TELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP-IS-DLNPLWMASGAKFHIVDCKGNIRT 420 (1172)
Q Consensus 343 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp-~s-D~~~~Llal~A~v~l~s~~g~~R~ 420 (1172)
.+|.+.+.+. .+. -+...+... +||||++.+-.- .+ .+.-.++ .|++. .+|..++
T Consensus 85 ~~l~~~~~~~--Gl~------------Gle~~~giP----GtvGGav~~NaGayG~e~~d~v~----~v~vv-~~G~v~~ 141 (268)
T 2gqt_A 85 PLLVQEAARA--GLS------------GLEGLLGIP----AQVGGAVKMNAGTRFGEMADALE----AVEVF-HDGAFHV 141 (268)
T ss_dssp HHHHHHHHHT--TEE------------SCGGGTTCC----CBHHHHHHTTCEETTEEGGGGEE----EEEEE-ETTEEEE
T ss_pred HHHHHHHHHc--CCc------------CCccccCcc----chhHHHHHhccccCchhHHhhee----EEEEE-CCCcEEE
Confidence 9999875431 100 001122222 699999975322 12 2222221 34455 6775777
Q ss_pred EehHhhhcccccccCCC-CeEEEEEEccCC
Q 001052 421 TMAEEFFLGYRKVDLTS-GEILLSIFLPWT 449 (1172)
Q Consensus 421 vpl~dF~~g~~~t~L~~-~Eil~~I~iP~~ 449 (1172)
++-+|.+-+|+...+.. + |||++.+...
T Consensus 142 ~~~~~l~~~YR~s~~~~~g-IVt~~~~~L~ 170 (268)
T 2gqt_A 142 YCPEELGFGYRKSHLPPGG-IVTRVRLKLK 170 (268)
T ss_dssp ECGGGSCCBTTBCCCSTTC-EEEEEEECCE
T ss_pred EchHHcccccCCCCcCCCc-eEEEEEEEEE
Confidence 88888888888876654 4 8888887654
No 53
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=96.21 E-value=0.024 Score=67.68 Aligned_cols=157 Identities=14% Similarity=0.121 Sum_probs=95.4
Q ss_pred ceEEecCCHHHHHHHHhh---C---CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHH
Q 001052 271 LKWYRPLKLQHLLELKSK---Y---PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTE 344 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~---~---~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1172)
..+++|+|.+|+.++++. + -...+++||+++.- ........+||++++..+-.+..+.+.+++||++++.+
T Consensus 44 ~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~---~~~~~~gvvIdl~~l~~i~~~d~~~~~v~v~aGv~l~~ 120 (481)
T 4feh_A 44 ANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGD---NAQNGGGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQ 120 (481)
T ss_dssp EEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSS---TTCCTTSEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred CEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCC---CCCCcCeEEEECccCCCceEEcCCCCEEEEcCCccHHH
Confidence 468899999998877654 2 34678899998732 11123568999998655544455566899999999999
Q ss_pred HHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcC--CEEEEEeCCCCeEEEe
Q 001052 345 LLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASG--AKFHIVDCKGNIRTTM 422 (1172)
Q Consensus 345 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~--A~v~l~s~~g~~R~vp 422 (1172)
|.+.+.+.=-.++ ..+-+. -+||||+|++.........-=...| -.+++...+|..+++.
T Consensus 121 L~~~l~~~Gl~l~-----------------~~~g~~-~~tvGGaia~~a~G~~~~~~G~~~d~V~~~evV~~dG~v~~~s 182 (481)
T 4feh_A 121 LMKAALPFGLWVP-----------------VLPGTR-QVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLT 182 (481)
T ss_dssp HHHHHGGGTEECS-----------------CCCSCS-CCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEECTTSCEEEEC
T ss_pred HHHHHHHcCCEEE-----------------EeCCcC-ccccCCccccccCCCCcccCCCccceEeEEEEEeCCCCEEEeC
Confidence 9988643211110 012232 4699999987532211000000111 2466677777666666
Q ss_pred hH----hhhcccccccCCCCeEEEEEEccCC
Q 001052 423 AE----EFFLGYRKVDLTSGEILLSIFLPWT 449 (1172)
Q Consensus 423 l~----dF~~g~~~t~L~~~Eil~~I~iP~~ 449 (1172)
-+ |.|.+++- .+..-.||+++.|...
T Consensus 183 ~~~~~~dLf~a~rg-s~G~~GIIt~~tl~l~ 212 (481)
T 4feh_A 183 PTGEDAELFWATVG-GNGLTGIIMRATIEMT 212 (481)
T ss_dssp SSSTTHHHHHHHTT-CTTTTCEEEEEEEECE
T ss_pred CCCCChHHHHHhhc-cCCCceEEEEEEEEEE
Confidence 54 66654443 2344458998887654
No 54
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=96.16 E-value=0.0036 Score=59.26 Aligned_cols=50 Identities=16% Similarity=0.260 Sum_probs=40.8
Q ss_pred eEEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcc--cCccC-CCCCceEEEEe
Q 001052 19 KEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTK--LGCGE-GGCGACTVMVS 70 (1172)
Q Consensus 19 ~~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k--~gC~~-G~CGaCtV~~~ 70 (1172)
.+|+|. -+|+.++++ +.++++||+.+++.|+. .. ..|+. |.||.|.|.|.
T Consensus 7 ~~V~~~~~~g~~~~v~-~~~g~tLL~aa~~~gi~-i~~~~~Cgg~G~CgtC~v~v~ 60 (108)
T 2bt6_A 7 ITVHFINRDGETLTTK-GKIGDSLLDVVVQNNLD-IDGFGACEGTLACSTCHLIFE 60 (108)
T ss_dssp EEEEEECTTSCEEEEE-EETTCBHHHHHHHTTCC-CTTTTTTSSSSSBSTTEEECC
T ss_pred EEEEEECCCCCEEEEE-ECCCChHHHHHHHcCCC-CCcccCCCCCcCcCCCEEEEC
Confidence 456665 479877776 78999999999998765 66 89976 99999999886
No 55
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=96.12 E-value=0.0047 Score=58.53 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=42.3
Q ss_pred ceEEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccC-CCCCceEEEEec
Q 001052 18 TKEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGE-GGCGACTVMVSR 71 (1172)
Q Consensus 18 ~~~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~-G~CGaCtV~~~~ 71 (1172)
+.+|+|. -||+.++++ +.++++||+.+++.|+. ....|+. |.||.|.|.|..
T Consensus 5 m~~v~~~~~~g~~~~~~-~~~g~tlL~aa~~~gi~-i~~~C~g~G~CgtC~v~v~~ 58 (109)
T 2y5c_A 5 VVNVVFVDRSGQRIPVS-GRVGDNVLHLAQRHGVD-LEGACEASLACSTCHVYVSE 58 (109)
T ss_dssp EEEEEEECTTSCEEEEE-EETTCBHHHHHHHTTCC-CCCTTSSSSSCCTTEEEECH
T ss_pred cEEEEEEcCCCCEEEEE-ECCCCcHHHHHHHcCCC-CCcCCCCCcCcCccEEEECC
Confidence 3456664 489987775 78999999999998875 7789987 999999998743
No 56
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=96.00 E-value=0.0045 Score=78.64 Aligned_cols=105 Identities=19% Similarity=0.283 Sum_probs=70.9
Q ss_pred EEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCc------cCCCCCceEEEEeccc--c-------CCCcc----cc
Q 001052 21 AILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGC------GEGGCGACTVMVSRYD--K-------KSKKC----VH 81 (1172)
Q Consensus 21 i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC------~~G~CGaCtV~~~~~~--~-------~~~~~----~~ 81 (1172)
++|+|||+.+++ .+++|||+.++..|+. .-.-| ..|.|+.|.|.|++.. + ++|+. ..
T Consensus 2 v~i~idg~~~~v---~~g~til~a~~~~gi~-ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~~~ 77 (783)
T 3i9v_3 2 VRVKVNDRIVEV---PPGTSVMDAVFHAGYD-VPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQP 77 (783)
T ss_dssp EEEECSSCEEEE---CTTCBHHHHHHHTTCC-CCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCBCS
T ss_pred eEEEECCEEEEe---CCCChHHHHHHHhCCC-ccccCCCCCCCCCcccCCcEEEecccccccccccccccccccccccCC
Confidence 689999998765 5899999999987654 23344 8999999999997421 0 01211 12
Q ss_pred eeecccccchhccCCceEEEeecccCCCCCcCHHHHHHHHhCCCCCCCCchH
Q 001052 82 CAVNACLAPLYSLEGMHVITVEGVGNRKHGLHPIQESLVRSHGSQCGFCTPG 133 (1172)
Q Consensus 82 ~~v~sCl~~~~~~~g~~i~T~Egl~~~~~~~~~iq~a~~~~~~~qCG~CtpG 133 (1172)
+.+.||.+|+. +|..|.|-.--- ...-.-+-+-+...|-.-|..|..|
T Consensus 78 ~~~~aC~t~v~--~gm~v~t~~~~~--~~~r~~~le~ll~nhp~dC~~C~~~ 125 (783)
T 3i9v_3 78 KLAASCVTAVA--DGMVVDTLSDVV--REAQAGMVEFTLLNHPLDCPTCDKG 125 (783)
T ss_dssp SCEETTTCBCC--SSEEEESSSHHH--HHHHHHHHHHHHTSCCCCTTTCTTG
T ss_pred CcccccCCCCC--CCCEEEECCHHH--HHHHHHHHHHHHhcCCCCCccCCCC
Confidence 57899999986 799998731100 0011234555677888899999876
No 57
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=95.97 E-value=0.0033 Score=61.48 Aligned_cols=48 Identities=21% Similarity=0.309 Sum_probs=40.0
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEE
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMV 69 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~ 69 (1172)
..++|+.||+. +++ +++++|||+.|++.|+. ...+|+.|.||.|.|-|
T Consensus 28 ~~i~i~~~g~~-~v~-v~~g~tlL~aa~~~Gi~-i~~~C~~G~CgtC~v~v 75 (128)
T 1doi_A 28 SDMDLDDEDYG-SLE-VNEGEYILEAAEAQGYD-WPFSCRAGACANCAAIV 75 (128)
T ss_dssp HHSCCCTTTEE-EEE-CCTTSCHHHHHHHTTCC-CCCSSSSSSSSTTEEEE
T ss_pred cEEEEEeCCcE-EEE-ECCCCcHHHHHHHcCCC-CccCCCccCCCCCEeEE
Confidence 45667889971 343 67899999999999886 88999999999999987
No 58
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=95.76 E-value=0.0081 Score=70.71 Aligned_cols=102 Identities=19% Similarity=0.232 Sum_probs=72.2
Q ss_pred ceEEecCCHHHHHHHHhhCCCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHHHHHHH
Q 001052 271 LKWYRPLKLQHLLELKSKYPDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTELLKMFR 350 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~~~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l~~~l~ 350 (1172)
..+++|+|.+|+.++++.....++++|||+...... . .....+||++++.....|..++..++++|++++.+|.+.+.
T Consensus 22 ~~v~~P~s~~ev~~~v~~a~~v~~~G~G~s~~~~~~-~-~~~g~vi~l~~l~~i~~~d~~~~~v~v~aG~~l~~l~~~l~ 99 (422)
T 2vfr_A 22 KELLRPHSLDALRALVADSARVRVLGSGHSFNEIAE-P-GDGGVLLSLAGLPSVVDVDTAARTVRVGGGVRYAELARVVH 99 (422)
T ss_dssp SSCBCCSSHHHHHHHHHHCSSEEECSSCCCCSSTTC-C-CTTCEEECSTTSCCCEEEETTTTEEEEETTCBHHHHHHHHH
T ss_pred CEEEeCCCHHHHHHHHHhCCCEEEEECCCCCCCCcc-C-CCCcEEEEhhhCCCcEEEcCCCCEEEEcCCCCHHHHHHHHH
Confidence 357899999999999887766788899987755332 1 13468999987655444455567899999999999999865
Q ss_pred HhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 001052 351 KVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1172)
Q Consensus 351 ~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 392 (1172)
+.=-. +..+.=-+.+||||+|++.
T Consensus 100 ~~Gl~------------------l~~~~~~~~~tvGG~i~~~ 123 (422)
T 2vfr_A 100 ARGLA------------------LPNMASLPHISVAGSVATG 123 (422)
T ss_dssp HTTEE------------------CSCCCSSSCSBHHHHHHHT
T ss_pred HcCCc------------------ccCCCCCCCeeHHHHHhcC
Confidence 42111 1122223567999999875
No 59
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=95.44 E-value=0.017 Score=55.03 Aligned_cols=41 Identities=24% Similarity=0.460 Sum_probs=34.1
Q ss_pred CCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEe
Q 001052 26 NGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVS 70 (1172)
Q Consensus 26 Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~ 70 (1172)
||+.++ +.++++||+.|++.|+. ....|+ .|.||.|.|-|.
T Consensus 15 ~~~~v~---~~~g~tlL~aa~~~Gi~-i~~~C~g~G~CgtC~v~v~ 56 (113)
T 3ah7_A 15 EGLTVE---VKPGTNILELAHDHHIE-MESACGGVKACTTCHCIVR 56 (113)
T ss_dssp TCEEEE---CCTTCBHHHHHHHTTCC-CCCTTCSSSSCSTTEEEEE
T ss_pred CCeEEE---ECCCCcHHHHHHHcCCC-CCcCCCCCCCcCCCEEEEc
Confidence 455554 67899999999999875 789998 699999999875
No 60
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=95.08 E-value=0.092 Score=63.99 Aligned_cols=108 Identities=11% Similarity=0.050 Sum_probs=68.0
Q ss_pred CceEEecCCHHHHHHHHhh---CC-CcEEEeccCcceeeeeeccccCceEEec-CCcccccceeecCCcEEEcccccHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISV-THVPELNVLNVKDDGLEIGAAVRLTE 344 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl-~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1172)
..-.++|+|.+|+.++++. +. ...+.+|||++.+--.-......++||+ +++...-.|..++..+++++++++.+
T Consensus 71 p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~ 150 (560)
T 1e8g_A 71 ASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHD 150 (560)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHH
T ss_pred CcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHH
Confidence 3468899999998887653 32 3455689998854000000234689999 76544433444567899999999999
Q ss_pred HHHHHHHhhhcCCCCccchHHHHHHHHHHhc-cccccccccccccccccC
Q 001052 345 LLKMFRKVVTERPAHETSSCKAFIEQIKWFA-GTQIKNVASVGGNICTAS 393 (1172)
Q Consensus 345 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ia-s~qIRN~aTiGGNI~~as 393 (1172)
|.+.+.+.=-.. .++ .+.-.+.+|+|||+++.+
T Consensus 151 l~~~l~~~Gl~~----------------~~~~~p~~~~~~tigG~~~~~g 184 (560)
T 1e8g_A 151 LHNYLEANNLRD----------------KLWLDVPDLGGGSVLGNAVERG 184 (560)
T ss_dssp HHHHHHHTTCTT----------------TEECCCCSSTTSBHHHHHHTTC
T ss_pred HHHHHHHcCCcc----------------ccCCCCCCCCccchhhhccCCC
Confidence 998865421110 011 233345899999987543
No 61
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=95.08 E-value=0.085 Score=63.77 Aligned_cols=102 Identities=12% Similarity=0.079 Sum_probs=66.4
Q ss_pred CceEEecCCHHHHHHHHhh----CC-CcEEEeccCcceeeeeeccccCceEEecCCcccccceee-----cC--CcEEEc
Q 001052 270 GLKWYRPLKLQHLLELKSK----YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNV-----KD--DGLEIG 337 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~----~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~-----~~--~~l~IG 337 (1172)
..-.++|+|.+|+.++++. +. ...+.+|||++.-. ......++||++++..+ .|.. ++ ..++++
T Consensus 62 P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~---~~~~~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~ 137 (524)
T 2exr_A 62 PLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQ---AMAEGGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVS 137 (524)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSST---TCCTTSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEE
T ss_pred CCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCc---ccCCCEEEEECcCCCCc-EEeecccCCCCCceEEEEe
Confidence 3468899999998887652 32 46778999998521 11113579999876655 4555 33 579999
Q ss_pred ccccHHHHHHH-HHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 001052 338 AAVRLTELLKM-FRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1172)
Q Consensus 338 A~vTl~~l~~~-l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 393 (1172)
|++++.++.+. +++. . | ...++.=-+.+||||+|++..
T Consensus 138 aGv~~~~l~~~~l~~~--G-----------l-----~~~~~~s~~~~tiGG~va~ng 176 (524)
T 2exr_A 138 GGALWEDVLKRCVSEY--G-----------L-----APRSWTDYLGLTVGGTLSNAG 176 (524)
T ss_dssp TTCBHHHHHHHHHHHH--S-----------E-----ECSCCCSCCSSBHHHHHTTCC
T ss_pred CCcCHHHHHHHHHHHc--C-----------C-----CCCCCCcCCceeecccCCCCC
Confidence 99999997554 2110 0 0 022333346789999999763
No 62
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=95.01 E-value=0.022 Score=70.87 Aligned_cols=106 Identities=12% Similarity=0.106 Sum_probs=73.4
Q ss_pred ceEEecCCHHHHHHHHhh---CC-CcEEEeccCcceeeee--eccccCceEEecCCcccccceeecCCcEEEcccccHHH
Q 001052 271 LKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMR--LKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTE 344 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~k--~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1172)
.-.++|+|.+|..++++- +. -..+.+|||++.-... ......-++||++++.....|..++..++++++|++.+
T Consensus 207 ~aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~ 286 (658)
T 4bby_A 207 DIVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQE 286 (658)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHH
T ss_pred CEEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHH
Confidence 357899999998887653 32 2566799998743111 11112236899999776666666778899999999999
Q ss_pred HHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 001052 345 LLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1172)
Q Consensus 345 l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 393 (1172)
|.+.|++.=-.++ -.|+=...+||||||++.+
T Consensus 287 L~~~L~~~Gl~lp-----------------~dP~S~~~aTIGG~iAtna 318 (658)
T 4bby_A 287 LERQLKESGYCTG-----------------HEPDSLEFSTVGGWISTRA 318 (658)
T ss_dssp HHHHHHHHTEECC-----------------CCCTTTTTCBHHHHHHHTC
T ss_pred HHHHHHHcCCccC-----------------CCCCCccccEEeehhhcCC
Confidence 9998765432222 1345567899999998764
No 63
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=95.00 E-value=0.018 Score=65.42 Aligned_cols=48 Identities=19% Similarity=0.387 Sum_probs=39.0
Q ss_pred EEEEEC---CEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEe
Q 001052 21 AILYVN---GLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1172)
Q Consensus 21 i~~~~N---g~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1172)
.+++++ |...+++ +++++|||+.+++.|+. ....|+.|.||.|.|.|.
T Consensus 4 ~~v~~~~~~~~~~~~~-~~~g~tll~a~~~~gi~-i~~~C~~g~Cg~C~v~v~ 54 (338)
T 1krh_A 4 HQVALQFEDGVTRFIC-IAQGETLSDAAYRQQIN-IPMDCREGECGTCRAFCE 54 (338)
T ss_dssp EEEEEECTTSCEEEEE-ECTTCCHHHHHHHTTCC-CSCSCSSSSSCTTEEEEE
T ss_pred eEEEEEEcCCCcEEEE-eCCCCcHHHHHHHcCCC-cccCCCCcCCCCCEEEEe
Confidence 344555 6556665 78899999999999885 889999999999999883
No 64
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=94.32 E-value=0.19 Score=60.77 Aligned_cols=151 Identities=12% Similarity=0.041 Sum_probs=88.6
Q ss_pred CceEEecCCHHHHHHHHh---h--C-C-CcEEEeccCcceeeeeeccccCceEEecCCccccc---ceeec--CCcEEEc
Q 001052 270 GLKWYRPLKLQHLLELKS---K--Y-P-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELN---VLNVK--DDGLEIG 337 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~---~--~-~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~---~I~~~--~~~l~IG 337 (1172)
..-.++|+|.+|+.++++ + + . ...+.+|||++.-. .......+||++++.... .++.+ +..+++|
T Consensus 69 p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~---~~~~~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~ 145 (534)
T 1w1o_A 69 PAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQ---AFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAG 145 (534)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSST---TCCTTSEEEEGGGGGCSSSSCSEEECTTSSEEEEE
T ss_pred CCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCC---cCCCCeEEEECccccccccCccEEEcCCCCEEEEC
Confidence 346789999999887664 2 2 2 35678999998631 111236899998765441 13443 4689999
Q ss_pred ccccHHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC---------CCChhHHHHhcCCE
Q 001052 338 AAVRLTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP---------ISDLNPLWMASGAK 408 (1172)
Q Consensus 338 A~vTl~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp---------~sD~~~~Llal~A~ 408 (1172)
|++++.++.+.+.+. + | ...++.-...+||||++.+... .+|.+ + .
T Consensus 146 aGv~~~~l~~~~~~~----G---------l-----~~~~~~~~~~~tvGG~v~~~g~g~~~~~yG~~~d~v-----~--~ 200 (534)
T 1w1o_A 146 GEQVWIDVLRASLAR----G---------V-----APRSWTDYLYLTVGGTLSNAGISGQAFRHGPQISNV-----L--E 200 (534)
T ss_dssp TTCBHHHHHHHHHTT----T---------E-----EESCCCSSCCSBHHHHHTTCCCSTTHHHHCCGGGSE-----E--E
T ss_pred CCcCHHHHHHHHHHC----C---------C-----cccCCCCCCCEEeceeccCCCccccccccccHhhhE-----E--E
Confidence 999999998875321 0 0 0122222356899999987432 12322 2 3
Q ss_pred EEEEeCCCCeEEEeh---HhhhcccccccCCCCeEEEEEEccCC
Q 001052 409 FHIVDCKGNIRTTMA---EEFFLGYRKVDLTSGEILLSIFLPWT 449 (1172)
Q Consensus 409 v~l~s~~g~~R~vpl---~dF~~g~~~t~L~~~Eil~~I~iP~~ 449 (1172)
+++...+|...+..- .|.|..++-. ...--|||++.+...
T Consensus 201 ~evV~~dG~v~~~~~~~~~dL~~~~rGs-~G~~GIVt~~~l~l~ 243 (534)
T 1w1o_A 201 MDVITGHGEMVTCSKQLNADLFDAVLGG-LGQFGVITRARIAVE 243 (534)
T ss_dssp EEEEETTSCEEEEESSSSHHHHHHHTTC-TTCSEEEEEEEEEEE
T ss_pred EEEEeCCccEEEECCCCChhhHhhhcCC-CCCcEEEEEEEEEEE
Confidence 455556774445543 4544433322 123357888776443
No 65
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=94.10 E-value=0.57 Score=53.03 Aligned_cols=191 Identities=14% Similarity=0.115 Sum_probs=110.3
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEe------CccCCCCCCCCCcchHHHHH-
Q 001052 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKETRSAFIAAA- 849 (1172)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFG~K~~~~~~~~~~- 849 (1172)
..+.++....+ .||.++|+++.+-. +.+...+|+.||+|.++|+|.. ++.+|.+|++.+.....++.
T Consensus 21 ~~~~~a~v~i~-~DG~V~v~~g~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~~~~T~gSrst~~~g~Av~~ 99 (330)
T 3hrd_B 21 PNPAAAFVEIH-GDGSANVMFGAADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMVTPDGGATSASRQTLITGNAVIL 99 (330)
T ss_dssp CCCEEEEEEEC-TTSCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHH
T ss_pred CCcceEEEEEe-CCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcchHhHHhHHHHHHH
Confidence 45667788887 58899999987543 3457788999999999999986 45578888886532221111
Q ss_pred H---------HHHHHhCCCCEEEE----------------eChhhh-----------------------hhh-cCCCC--
Q 001052 850 A---------AVPSFLLNRPVNLT----------------LDRDID-----------------------MMI-SGQRH-- 878 (1172)
Q Consensus 850 a---------AlaA~k~gRPVkl~----------------~tR~E~-----------------------~~~-~~~R~-- 878 (1172)
| .++|+.++.|..=. ++-.|- +.. ..+.+
T Consensus 100 Aa~~lr~~L~~~AA~~~~~~~~~l~~~~G~v~~~~~~~~~~s~~ela~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 179 (330)
T 3hrd_B 100 ACRQAKETLAKTAAEKLDCAPEELSFRDNTVFITADPERSMTYGELMAAMKAAGRMAVGAGSYNPNTTGLAPENMSGIPF 179 (330)
T ss_dssp HHHHHHHHHHHHHHSSSCCSSSCCCSSSBCCCCSSCSCSCCBHHHHHHHHHHTTCCEEEEEEECCCCCCCCTTTCCSCCC
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHEEEeCCEEEECCCCCCcccHHHHHHHHhhcCCceeEEEEecCCCCccccccccCCCC
Confidence 1 12333333321000 000000 000 00111
Q ss_pred ---ce-EEEEEEeeC-CCCcEEEEEEeEEecCCCCCCchHH-------HHH---HHhh---cc-----------CCCCCC
Q 001052 879 ---SF-LGKYKVGFT-NEGKVLALDLEIYNNAGNSLDLSLA-------VLE---RAMF---HS-----------DNVYEI 929 (1172)
Q Consensus 879 ---~~-~~~~k~g~d-~dG~i~a~~~~~~~d~Ga~~~~s~~-------v~~---~~~~---~~-----------~~~Y~i 929 (1172)
++ .+-.++-+| ..|++.=.++....|+|-..+.... +.. .++. .. ..-|.+
T Consensus 180 ~~~~~ga~~~eVeVd~~tG~v~v~~~~~~~D~G~~iNp~~~~gQi~Gg~~~Glg~al~E~~~~d~~~G~~~~~~~~~Y~i 259 (330)
T 3hrd_B 180 EVYSYATTIAEVEVDTETGEVDVLKVVSAHDVGTPINRSMVEGQIEGGVTMGQGFVLMEEIEVNTKNGAIKNPSMSKYII 259 (330)
T ss_dssp SCEEEEEEEEEEEEETTTCCEEEEEEEEEEEEESCSBHHHHHHHHHHHHHHHHHHHHTCCCCBCTTTCCBSCCSTTTSCC
T ss_pred CCCceeEEEEEEEEECCCCcEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHhcCceEEeCCCCeECCCCHHHCcC
Confidence 12 122366677 5799999999999999987653211 110 0110 01 123655
Q ss_pred CeE----EEEEEEEecCCCCCCcc--CCCChhhhHHHHHHHHHHHHHHcCC
Q 001052 930 PNV----RIMGNVCFTNFPSNTAF--RGFGGPQGMLITENWIQRVAVEVRK 974 (1172)
Q Consensus 930 pn~----~~~~~~v~TN~~~~ga~--RG~G~~q~~fa~Es~mDelA~~lg~ 974 (1172)
|.. .++...+.++.++ ++| +|.|.+...-+.=.+.+-+.+.+|.
T Consensus 260 p~~~d~P~i~v~~~~~~~~~-~p~GakgvGE~~~~~~~~Ai~nAi~~A~G~ 309 (330)
T 3hrd_B 260 PSNRDVPEIHSILVESEGGP-GPFGAKGVGEPALIPMIPAVVAAIEDALGT 309 (330)
T ss_dssp CCTTTCCEEEEEEEECSCCS-SGGGCCCCTTTTTTTHHHHHHHHHHHHHTS
T ss_pred CCcccCCCEEEEEecCCCCC-CCCcccccCcCcccchHHHHHHHHHHHhCC
Confidence 433 4667777776554 555 7888887766666777777777775
No 66
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=93.87 E-value=0.081 Score=63.10 Aligned_cols=103 Identities=16% Similarity=0.159 Sum_probs=70.8
Q ss_pred ceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceee-eeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 271 LKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIE-MRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~-~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..+++|+|.+|+.++++. + -...+.+|||++.-. .. .....+||++++.....|..++..++++|++++.+|
T Consensus 53 ~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~---~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l 129 (476)
T 3pm9_A 53 PLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTP---HNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRV 129 (476)
T ss_dssp SCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCC---CSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccC---CCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHH
Confidence 468899999998777653 2 247788999998521 11 122689999986655555566788999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 001052 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1172)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 393 (1172)
.+.+.+.=-.++ -++.-...+||||+|++..
T Consensus 130 ~~~l~~~Gl~~~-----------------~~~~s~~~~tvGG~ia~na 160 (476)
T 3pm9_A 130 QEKAAEVDRLFP-----------------LSLGAQGSCTIGGNLSTNA 160 (476)
T ss_dssp HHHHHHTTEECC-----------------CCCTTTTTCBHHHHHHHTC
T ss_pred HHHHHHhCCccC-----------------CCCCCCCcEEEccccCCCC
Confidence 988654211111 1223345799999997543
No 67
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=93.78 E-value=0.013 Score=56.84 Aligned_cols=50 Identities=16% Similarity=0.283 Sum_probs=11.9
Q ss_pred eEEEEE-ECCEEEEecCCCCCCcHHHHHhhCCCCCcc--cCcc-CCCCCceEEEEe
Q 001052 19 KEAILY-VNGLRKVLPDGLAHLTLLEYLRDIGLTGTK--LGCG-EGGCGACTVMVS 70 (1172)
Q Consensus 19 ~~i~~~-~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k--~gC~-~G~CGaCtV~~~ 70 (1172)
.+|+|. -+|+.++++ +.++++|++.+++.|+. .. ..|+ .|.||.|-|.|.
T Consensus 6 v~Vtf~~~~G~~~~v~-~~~G~tLl~aa~~~gi~-i~g~~~CgG~g~CgtC~v~v~ 59 (123)
T 3n9z_C 6 ITVHFINRDGETLTTK-GKVGDSLLDVVVENNLD-IDGFGACEGTLACSTCHLIFE 59 (123)
T ss_dssp ---------------------------------------CTTCSSSSCSTTBC---
T ss_pred EEEEEEeCCCCEEEEE-ECCCCcHHHHHHHcCCC-CCcCCCCCCCCEeCCCeeEEe
Confidence 356665 589888886 88999999999998776 55 7898 799999999875
No 68
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=93.77 E-value=0.25 Score=58.88 Aligned_cols=152 Identities=11% Similarity=0.057 Sum_probs=90.3
Q ss_pred CCceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHH
Q 001052 269 GGLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTE 344 (1172)
Q Consensus 269 ~~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1172)
.....++|+|.+|+.++++. + -...+.+||+++.-. .........+||++++.....|..++..+++||++++.+
T Consensus 36 ~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~-~~~~~~~~vvIdl~~~~~i~~vd~~~~~v~v~aG~~~~~ 114 (473)
T 3rja_A 36 IPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASF-GFGGENGHLMVQLDRMIDVISYNDKTGIAHVEPGARLGH 114 (473)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCG-GGTSSSSCEEEECTTCCCEEEEETTTTEEEECTTCBHHH
T ss_pred CCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCC-cccCCCCeEEEECCCCCceEEEcCCCCEEEECCCCCHHH
Confidence 34578999999998776543 3 257888999998520 111223458999988655444445567899999999999
Q ss_pred HHHHHHHhh-hcCCCCccchHHHHHHHHHHhccccccccccccccccccCC---------CCChhHHHHhcCCEEEEEeC
Q 001052 345 LLKMFRKVV-TERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP---------ISDLNPLWMASGAKFHIVDC 414 (1172)
Q Consensus 345 l~~~l~~~~-~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp---------~sD~~~~Llal~A~v~l~s~ 414 (1172)
|.+.+.+.= .. +. .-.=...+|||++..+.. .+|.+ + .+++...
T Consensus 115 l~~~l~~~G~~~------------------~p-~G~~~~vgvgG~~~ggg~G~~~~~~G~~~D~v-----~--~~~vV~a 168 (473)
T 3rja_A 115 LATVLNDKYGRA------------------IS-HGTCPGVGISGHFAHGGFGFSSHMHGLAVDSV-----V--GVTVVLA 168 (473)
T ss_dssp HHHHHHHHHSEE------------------CC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGE-----E--EEEEECT
T ss_pred HHHHHHHcCCEE------------------ec-cCCCCCcEeeeeccCCCCCcccccccchHhhe-----e--eEEEEec
Confidence 998754321 11 10 012233578998876533 23322 2 3455556
Q ss_pred CCCeEEEehH---hhhcccccccCCCCeEEEEEEccC
Q 001052 415 KGNIRTTMAE---EFFLGYRKVDLTSGEILLSIFLPW 448 (1172)
Q Consensus 415 ~g~~R~vpl~---dF~~g~~~t~L~~~Eil~~I~iP~ 448 (1172)
+|...++.-+ |.|-+++-. ...--|||++.+..
T Consensus 169 ~G~v~~~~~~~~~dLf~a~rG~-~g~~GIVt~~~l~l 204 (473)
T 3rja_A 169 DGRIVEASATENADLFWGIKGA-GSNFGIVAVWKLAT 204 (473)
T ss_dssp TSCEEEEETTBSHHHHHHHHHH-GGGTCEEEEEEEEC
T ss_pred CCeEEEeCCCCCcchhhcccCC-CCceEEEEEEEEEE
Confidence 6644555433 555433221 12224888887654
No 69
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=93.75 E-value=0.04 Score=62.22 Aligned_cols=49 Identities=22% Similarity=0.422 Sum_probs=37.7
Q ss_pred EEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEe
Q 001052 20 EAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVS 70 (1172)
Q Consensus 20 ~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~ 70 (1172)
..++++.+...+++ +.++++||+.|++.|+. ...+|+.|.||.|.|-|-
T Consensus 237 ~~~v~~~~~~~~~~-~~~~~~ll~a~~~~g~~-~~~~C~~G~Cg~C~~~v~ 285 (321)
T 2pia_A 237 PFTVRLSRSGTSFE-IPANRSILEVLRDANVR-VPSSCESGTCGSCKTALC 285 (321)
T ss_dssp CEEEEETTTCCEEE-ECTTSCHHHHHHHTTCC-CCCSCSSSSSCTTEEEEE
T ss_pred cEEEEEeCCCeEEE-ECCCCcHHHHHHHcCCC-CCCCCCCCCCCCCEEEEe
Confidence 34455543333443 56899999999999876 789999999999999764
No 70
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=93.45 E-value=0.092 Score=64.20 Aligned_cols=107 Identities=14% Similarity=0.092 Sum_probs=70.0
Q ss_pred ceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceee-eeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 271 LKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIE-MRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~-~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
...++|+|.+|+.++++. + -...+.+|||++.-. .........++||++++.....|..++..++++|++++.+|
T Consensus 139 ~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l 218 (584)
T 2uuu_A 139 DLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPEL 218 (584)
T ss_dssp SEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHH
T ss_pred CEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHH
Confidence 467899999998887653 2 246788999998521 11111123468999876555445555578999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC
Q 001052 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP 394 (1172)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp 394 (1172)
.+.+.+.=-.++ ..+.--..+||||+|++...
T Consensus 219 ~~~l~~~Gl~~~-----------------~~p~s~~~~tvGG~ia~na~ 250 (584)
T 2uuu_A 219 EKQLHKQGVSLG-----------------HDPDSFEFSTLGGWLATCSS 250 (584)
T ss_dssp HHHHHHTTEECC-----------------CCCTTGGGCBHHHHHHHTCC
T ss_pred HHHHHHcCCeeC-----------------cCCCccCCeeEeeeccCCCC
Confidence 988754321111 12222355899999986543
No 71
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.41 E-value=0.091 Score=62.93 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=52.8
Q ss_pred CCCcceEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCC----cccCccCCC--CCceEEEEeccccCCCcccceeeccc
Q 001052 14 GEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTG----TKLGCGEGG--CGACTVMVSRYDKKSKKCVHCAVNAC 87 (1172)
Q Consensus 14 ~~~~~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g----~k~gC~~G~--CGaCtV~~~~~~~~~~~~~~~~v~sC 87 (1172)
.++.+..++|++||+.+++ .+++||++.|+..|..- .+. =..|. ||+|.|-|++. ..+++|
T Consensus 9 ~~~~~~~v~~~~dg~~~~~---~~g~ti~~a~~~~g~~~~~~~~~~-~p~g~~~~~~c~v~v~g~---------~~~~ac 75 (493)
T 1y56_A 9 TEKRGKKVTIYFEGKELEA---YEGEKLPVALLANEIYWLTTSNEG-RKRGAFTFGPVPMTVNGV---------KGLEAR 75 (493)
T ss_dssp SCCCSCEEEEEETTEEEEE---ETTCBHHHHHHHTTCCCCEECTTS-CEECSSSSSCCEEBSSSC---------TTEEGG
T ss_pred ccCCCCeEEEEECCEEEEe---cCCCHHHHHHHHCCCceecCCCCC-CCCccccceEEEEEECCE---------ecccce
Confidence 4455668999999999876 47999999998765422 222 12243 88999999851 128999
Q ss_pred ccchhccCCceEEEe
Q 001052 88 LAPLYSLEGMHVITV 102 (1172)
Q Consensus 88 l~~~~~~~g~~i~T~ 102 (1172)
.+++ -+|..+.|-
T Consensus 76 ~~~v--~~Gm~v~t~ 88 (493)
T 1y56_A 76 RIKV--KDGMKIERQ 88 (493)
T ss_dssp GCBC--CTTCEEBCC
T ss_pred eEEc--ccCcEEecc
Confidence 9996 478877764
No 72
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=93.07 E-value=1.4 Score=55.66 Aligned_cols=191 Identities=13% Similarity=0.091 Sum_probs=115.4
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEe------CccCCCCCCCCCcchHHHHHH
Q 001052 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKETRSAFIAAAA 850 (1172)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFG~K~~~~~~~~~~a 850 (1172)
+...++.+..+ .||.++|+++++.. +.+...+|+.||+|.++|+|.. ++-+|.+|++.+...-.++.-
T Consensus 457 ~~~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~ 535 (769)
T 1rm6_A 457 EPHATVNLKLD-FDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASIS 535 (769)
T ss_dssp CCSEEEEEEEC-TTCCEEEEECCCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHHHHHHHHH
T ss_pred CCCccEEEEEe-CCCeEEEEECCccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHHHHH
Confidence 35567888887 58899999998655 5567889999999999999986 455678888765322211111
Q ss_pred ----------HHHHHhCCCC---EEE-----------------------------------EeChhhhhhhcCC------
Q 001052 851 ----------AVPSFLLNRP---VNL-----------------------------------TLDRDIDMMISGQ------ 876 (1172)
Q Consensus 851 ----------AlaA~k~gRP---Vkl-----------------------------------~~tR~E~~~~~~~------ 876 (1172)
.++|..++.+ +.+ .+.-...+...+.
T Consensus 536 Aa~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~ 615 (769)
T 1rm6_A 536 AAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAI 615 (769)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEETTEEEETTCSSCCEEHHHHHHHHHTTTCSEEEEEEECCCGGGSCCTTCGGGGT
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHeEEeCCEEEEccCCCCccCHHHHHHhhhhcccccccccceecccccccccccccccc
Confidence 1122222211 000 0110001100010
Q ss_pred --CC--ce-EEEEEEeeCCC-CcEEEEEEeEEecCCCCCCchHH--HHHH--------Hhh------------ccCCCCC
Q 001052 877 --RH--SF-LGKYKVGFTNE-GKVLALDLEIYNNAGNSLDLSLA--VLER--------AMF------------HSDNVYE 928 (1172)
Q Consensus 877 --R~--~~-~~~~k~g~d~d-G~i~a~~~~~~~d~Ga~~~~s~~--v~~~--------~~~------------~~~~~Y~ 928 (1172)
.. ++ .+-.++.+|.+ |++.=.++....|+|-..+.... -+.. ++. ....-|.
T Consensus 616 ~~~~~~~~ga~~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~G~~~~~~~~dY~ 695 (769)
T 1rm6_A 616 GATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYR 695 (769)
T ss_dssp TCCSCEEEEEEEEEEEECTTTCCEEEEEEEEEEECSSCSSHHHHHHHHHHHHHHHHHHHHTCCCCEETTEESCCSTTTSC
T ss_pred CCCCCcceEEEEEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHhHHHHHHHHHhcceeEecCCEeCCCChhhcc
Confidence 11 22 33458888875 99999999999999987653211 0111 000 0112354
Q ss_pred CCeE----EEEEEEEecCCCCCCcc--CCCChhhhHHHHHHHHHHHHHHcCC
Q 001052 929 IPNV----RIMGNVCFTNFPSNTAF--RGFGGPQGMLITENWIQRVAVEVRK 974 (1172)
Q Consensus 929 ipn~----~~~~~~v~TN~~~~ga~--RG~G~~q~~fa~Es~mDelA~~lg~ 974 (1172)
+|.. .++...+.++.+ .++| +|.|.+...-+.=.+.+-+.+.+|.
T Consensus 696 ip~~~D~P~i~v~~ve~~~~-~~p~GaKGvGE~~~~~~~~AIaNAv~~A~G~ 746 (769)
T 1rm6_A 696 VPTIVESPDIEVIIVESMDP-NGPFGAKEASEGMLAGFLPAIHEAVYEAVGV 746 (769)
T ss_dssp CCCTTTCCEEEEEEECCCCT-TSGGGCCCCSSTTTTTHHHHHHHHHHHHHSC
T ss_pred CCCcccCCCEEEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHhCC
Confidence 4433 467777887666 4676 8999988877777788888888876
No 73
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=93.05 E-value=0.091 Score=63.97 Aligned_cols=107 Identities=22% Similarity=0.144 Sum_probs=66.9
Q ss_pred CceEEecCCHHHHHHHHhh---CC-CcEEEeccCcceee-eeec--cccCceEEecCCcccccceeecCCcEEEcccccH
Q 001052 270 GLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIE-MRLK--RMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRL 342 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~-~k~~--~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl 342 (1172)
....++|+|.+|+.++++. +. ...+.+|||++.-. .... .....++||++++..+..|. ++..++++|++++
T Consensus 46 p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id-~~~~v~v~aGv~l 124 (571)
T 1f0x_A 46 ALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLG-KGEQVLAYPGTTL 124 (571)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEET-TTTEEEECTTCBH
T ss_pred ccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeEC-CCCeEEEcCCcCH
Confidence 3468899999998887653 32 35677999998421 1111 01125799998854443333 2467999999999
Q ss_pred HHHHHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccC
Q 001052 343 TELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTAS 393 (1172)
Q Consensus 343 ~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~as 393 (1172)
.+|.+.+.+.=...+. ..++.. ..+||||+|++.+
T Consensus 125 ~~L~~~l~~~Gl~~p~--------------~~g~s~--~~~tvGG~ia~na 159 (571)
T 1f0x_A 125 YSLEKALKPLGREPHS--------------VIGSSC--IGASVIGGICNNS 159 (571)
T ss_dssp HHHHHHHGGGTEECSC--------------CCGGGG--GTCBHHHHHHTTC
T ss_pred HHHHHHHHhcCccCCc--------------CCCccC--CCceecccccCCC
Confidence 9999987542111110 011111 3579999998764
No 74
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=92.78 E-value=2.9 Score=52.79 Aligned_cols=189 Identities=14% Similarity=0.089 Sum_probs=111.4
Q ss_pred CCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEe-----CccCCCCCCCCCcchHHHHHHH--
Q 001052 784 PHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT-----KRIGGGFGGKETRSAFIAAAAA-- 851 (1172)
Q Consensus 784 p~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~-----~~vGGgFG~K~~~~~~~~~~aA-- 851 (1172)
..++.+..+ .||.++|+++++.. +.+...+|+.||+|.++|+|.. ++-+|.+|++.+...-.++.-|
T Consensus 484 ~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~~p~~~~t~aSr~t~~~G~Av~~Aa~ 562 (788)
T 1t3q_B 484 HDSATVRID-PTGKVTVTTSLASSGQGHETTLAQIAADVLGVPASDVVIQAGSTKNTYGFGAYASRGAVIGAGSIGRAAS 562 (788)
T ss_dssp CBEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTTSCCBCCSCTTCHHHHHHHHHHHHHH
T ss_pred cccEEEEEe-cCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCccchHHHHHHHHHHHHHH
Confidence 356777777 58899999998655 5567889999999999999997 4567788887653222111111
Q ss_pred --------HHHHhCCCC---EEEE-------------eChhhh----------hhh------------cCCCC--c-eEE
Q 001052 852 --------VPSFLLNRP---VNLT-------------LDRDID----------MMI------------SGQRH--S-FLG 882 (1172)
Q Consensus 852 --------laA~k~gRP---Vkl~-------------~tR~E~----------~~~------------~~~R~--~-~~~ 882 (1172)
++|..++.+ +.+. ++-.|- +.. ..... + ..+
T Consensus 563 ~l~~~l~~~aa~~l~~~~~~l~~~~g~~~~~~~~~~~~~~~el~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ga~ 642 (788)
T 1t3q_B 563 IVRERVKQLAGHLLEAASEDIVIEDGLVHVAGVPAKGMPFAEVVGAAYFADATHPPGFDATLEATATYDPSDLVLANGGH 642 (788)
T ss_dssp HHHHHHHHHHHHHHTSCGGGEEEETTEEEETTEEEEEEEHHHHHHHHHHCGGGCCTTCCCCCEEEEECCCSSCEEEEEEE
T ss_pred HHHHHHHHHhHhhhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhcCcccccCccCCcccccccCCCCCCcceEEE
Confidence 122222211 1100 010110 110 00000 2 123
Q ss_pred EEEEeeCCC-CcEEEEEEeEEecCCCCCCchHH--HHHH--------Hhh-------------ccCCCCCCCeE----EE
Q 001052 883 KYKVGFTNE-GKVLALDLEIYNNAGNSLDLSLA--VLER--------AMF-------------HSDNVYEIPNV----RI 934 (1172)
Q Consensus 883 ~~k~g~d~d-G~i~a~~~~~~~d~Ga~~~~s~~--v~~~--------~~~-------------~~~~~Y~ipn~----~~ 934 (1172)
-.++.+|.+ |++.=.++.+..|+|-..+.... -+.. ++. ....-|.+|.. .+
T Consensus 643 ~aeVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i 722 (788)
T 1t3q_B 643 AAIVEIDASTYATRVTDFFAVEDCGTMINPMIVEGQIRGGIAQAIGQTLLEEVIYDDFGQLVTTTLMDYLIPTTLDVPDI 722 (788)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCBCBCTTSCBCCCSTTTSCCCCTTTCCCE
T ss_pred EEEEEEECCCceEEEEEEEEEEECCccCCHHHHHHHHHHhHHHHHHHHhcceeEECCCCCCCCCChhhccCCCcccCCCE
Confidence 347788875 99999999999999987653211 0111 010 01123544432 45
Q ss_pred EEEEEecCCCCCCcc--CCCChhhhHHHHHHHHHHHHHHc---CC
Q 001052 935 MGNVCFTNFPSNTAF--RGFGGPQGMLITENWIQRVAVEV---RK 974 (1172)
Q Consensus 935 ~~~~v~TN~~~~ga~--RG~G~~q~~fa~Es~mDelA~~l---g~ 974 (1172)
+...+.+..+ .++| +|.|.+...-+.=.+.+-|.+.+ |.
T Consensus 723 ~v~~ve~~~~-~~p~GaKGvGE~~~~~~a~AiaNAI~~A~~~~G~ 766 (788)
T 1t3q_B 723 RIRHLETPSP-LVPGGIKGMGESAMISAPAAVVAAVNDALAHLEV 766 (788)
T ss_dssp EEEECCCCCT-TSGGGBCCCTTHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEEeCCCC-CCCCCCccccccchhhHHHHHHHHHHHHHHhcCC
Confidence 6667777665 4676 79999988877777888888888 65
No 75
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=92.48 E-value=0.27 Score=59.17 Aligned_cols=103 Identities=11% Similarity=0.031 Sum_probs=65.1
Q ss_pred ceEEecCCHHHHHHHHhhC----CCcEEEeccCcceeeee-ecc-ccCceEEecC-Ccccccceeec--CCcEEEccccc
Q 001052 271 LKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIEMR-LKR-MQYQVLISVT-HVPELNVLNVK--DDGLEIGAAVR 341 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~~----~~a~lvaGgTdl~v~~k-~~~-~~~~~lIdl~-~v~EL~~I~~~--~~~l~IGA~vT 341 (1172)
..+++|+|.+|+.++++.. -..++++||+++.-... .+. ....++||++ ++..+ .|..+ ...+++||+++
T Consensus 31 ~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~~~~~GVvIdls~~Ln~I-~vD~~~~~~tVtV~AGv~ 109 (540)
T 3js8_A 31 VWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGVSCPAVVLLDTTRYLTAM-SIDASGPVAKVTAQAGIT 109 (540)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTCSSCSEEEEETTTTCCCE-EEECSSSSEEEEEETTSB
T ss_pred cEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCCCCCCeEEEECcCcCCCE-EECCCCCccEEEEccCCC
Confidence 4679999999998876532 24678899998842111 111 1234689995 46554 33332 25799999999
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 001052 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1172)
Q Consensus 342 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 392 (1172)
+.+|.+.+.+.=-.++ ..+.+ ..+||||.|++.
T Consensus 110 l~~L~~~L~~~GL~l~-----------------~~~gi-~~~TVGGaia~g 142 (540)
T 3js8_A 110 MEALLTGLEKAGLGVT-----------------AAPAP-GDLTLGGVLAIN 142 (540)
T ss_dssp HHHHHHHHHHTTEECS-----------------CCCSC-SCSBHHHHHHTT
T ss_pred HHHHHHHHHHcCCEEE-----------------ecCCC-CCeEEcccccCC
Confidence 9999988653211110 11223 448999999753
No 76
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=92.48 E-value=1.7 Score=55.76 Aligned_cols=188 Identities=15% Similarity=0.057 Sum_probs=117.0
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHh---CCCCccEEEEe------CccCCCCCCCCCcchHHH
Q 001052 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVL---GLPMSKVVCKT------KRIGGGFGGKETRSAFIA 847 (1172)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~L---glp~~kV~V~~------~~vGGgFG~K~~~~~~~~ 847 (1172)
+...++.+..+ .||.++|+++++.. +.+...+|+.| |+|.++|+|.. ++-+|.+|++.+...-.+
T Consensus 631 ~~~~~a~v~l~-~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~A 709 (907)
T 1dgj_A 631 PDTSEAWVELN-DDGSVTLGNSWEDHGQGADAGSLGTAHEALRPLGITPENIHLVMNDTSKTPNSGPAGGSRSQVVTGNA 709 (907)
T ss_dssp SCEEEEEEEEC-TTSCEEEEECCCCSSSCHHHHHHHHHHHHTGGGTCCGGGEEEEESBTTTSCCCCCSCTTCTTTHHHHH
T ss_pred CCCccEEEEEe-CCCeEEEEECCcCCCccHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHHH
Confidence 35567788887 58899999998655 55678899999 99999999986 455788999876433322
Q ss_pred HHHHHHHHhCC---CCEE-EEeChhhhhhh--------------------cCC-CC----ce-EEEEEEeeCCC-CcEEE
Q 001052 848 AAAAVPSFLLN---RPVN-LTLDRDIDMMI--------------------SGQ-RH----SF-LGKYKVGFTNE-GKVLA 896 (1172)
Q Consensus 848 ~~aAlaA~k~g---RPVk-l~~tR~E~~~~--------------------~~~-R~----~~-~~~~k~g~d~d-G~i~a 896 (1172)
+ -.||.++. +++. -.+ ..|++.. ++. .+ ++ .+-.++.+|.+ |++.=
T Consensus 710 v--~~Aa~~l~~~l~~~aa~~l-~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~aEVeVD~~TG~v~V 786 (907)
T 1dgj_A 710 I--RVACEMLIEGMRKPGGGFF-TPAEMKAEGRPMRYDGKWTAPAKDCDAKGQGSPFACYMYGLFLTEVAVEVATGKATV 786 (907)
T ss_dssp H--HHHHHHHHHHTBCSSSSBC-CHHHHHHTTCCCEEEEEEECSCBCCCTTSCSBCCSEEEEEEEEEEEEEETTTTEEEE
T ss_pred H--HHHHHHHHHHHHHHhhhcC-CHHHHhhCCeEEEecceeeccCCCcCCCCCCCCCCCCceEEEEEEEEEECCCCcEEE
Confidence 2 22333321 1110 000 1111110 011 11 22 23347888865 99999
Q ss_pred EEEeEEecCCCCCCchHH--HHHH--------Hh---------hccCCCCCCCeE----E-EEEEEEecCCCCCCcc--C
Q 001052 897 LDLEIYNNAGNSLDLSLA--VLER--------AM---------FHSDNVYEIPNV----R-IMGNVCFTNFPSNTAF--R 950 (1172)
Q Consensus 897 ~~~~~~~d~Ga~~~~s~~--v~~~--------~~---------~~~~~~Y~ipn~----~-~~~~~v~TN~~~~ga~--R 950 (1172)
.++....|+|-..+.... -+.. ++ .....-|.+|.. . ++...+.+..+ .++| +
T Consensus 787 ~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~G~~~~~~~~dY~ip~~~D~P~~i~v~~~e~~~~-~~p~GaK 865 (907)
T 1dgj_A 787 EKMVCVADIGKICNKLVVDGQIYGGLAQGVGLALSEDYEDLKKHSTMGGAGIPSIKMIPDDIEIVYVETPRK-DGPFGAS 865 (907)
T ss_dssp EEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTTTTSSTTTTTCCCGGGSCSCEEEEECCCCCT-TSGGGBC
T ss_pred EEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCCChhhCcCCChHHCCCcEEEEEecCCCC-CCCCCCc
Confidence 999999999987653211 0111 00 011234655543 2 66677777665 4677 7
Q ss_pred CCChhhhHHHHHHHHHHHHHHcCC
Q 001052 951 GFGGPQGMLITENWIQRVAVEVRK 974 (1172)
Q Consensus 951 G~G~~q~~fa~Es~mDelA~~lg~ 974 (1172)
|.|.+...-+.=.+.+-+.+.+|.
T Consensus 866 GvGE~~~~~~~~AIaNAv~~A~G~ 889 (907)
T 1dgj_A 866 GVGEMPLTAPHAAIINGIYNACGA 889 (907)
T ss_dssp CCTTGGGSSHHHHHHHHHHHHHSC
T ss_pred ccCccccchHHHHHHHHHHHhhCC
Confidence 999988887777888888888886
No 77
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=92.42 E-value=0.38 Score=57.56 Aligned_cols=161 Identities=13% Similarity=0.069 Sum_probs=90.5
Q ss_pred CceEEecCCHHHHHHHHhh---CC-CcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..-.++|+|.+|+.++++. +. ...+.+||+++.-.- ........+||++++..+ .|..++..+++||++|+.+|
T Consensus 46 P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~-~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V~aG~~l~~l 123 (495)
T 3fw9_A 46 PSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLS-YTSDTPFILIDLMNLNRV-SIDLESETAWVESGSTLGEL 123 (495)
T ss_dssp CSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTT-SCCSSCEEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCcc-ccCCCCeEEEECCCCCcE-EEeCCCCEEEEcCCCCHHHH
Confidence 4578999999998877653 22 367889999873210 000112579999885544 34445678999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCCCChhHHHHhcC--CEEEEEeCCCCeEEE--
Q 001052 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPISDLNPLWMASG--AKFHIVDCKGNIRTT-- 421 (1172)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~sD~~~~Llal~--A~v~l~s~~g~~R~v-- 421 (1172)
.+.+.+.-..+ .+. .-+-...+|||++..+....-...-=++.| -.++++..+|..++-
T Consensus 124 ~~~l~~~g~gl----------------~~~-~G~~~~vgigG~~~gGg~G~~~~~~G~~~D~v~~~~vV~adG~i~~~~~ 186 (495)
T 3fw9_A 124 YYAITESSSKL----------------GFT-AGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQA 186 (495)
T ss_dssp HHHHHHHCSSE----------------ECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGEEEEEEECTTCCEECHHH
T ss_pred HHHHHHhcCCc----------------eec-cCCCCCCeEeeeccCCCCcccccCCCchhheEEEEEEEcCCCCEEEcCC
Confidence 98764331010 011 123345688998876543211100000111 246666777733321
Q ss_pred ehHhhhcccccccCCCCeEEEEEEccCC
Q 001052 422 MAEEFFLGYRKVDLTSGEILLSIFLPWT 449 (1172)
Q Consensus 422 pl~dF~~g~~~t~L~~~Eil~~I~iP~~ 449 (1172)
.=.|+|-.++-.....--|||++.|...
T Consensus 187 ~~~DLf~a~rGg~~g~~GIVt~~~l~l~ 214 (495)
T 3fw9_A 187 MGEDVFWAIRGGGGGVWGAIYAWKIKLL 214 (495)
T ss_dssp HCHHHHHHHTTSCTTSSCEEEEEEEECE
T ss_pred CChhhhhhhhcccCCCcEEEEEEEEEEE
Confidence 1135555443312223359999887543
No 78
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=91.99 E-value=0.17 Score=60.96 Aligned_cols=82 Identities=5% Similarity=0.005 Sum_probs=55.5
Q ss_pred CceEEecCCHHHHHHHHhh---CC-CcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---YP-DSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~~-~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..-.++|+|.+|+.++++. +. ...+++|||.+..--.........+||++++.....|..++..++++|++++.+|
T Consensus 57 p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l 136 (520)
T 1wvf_A 57 PSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQM 136 (520)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHH
Confidence 3468999999998877643 32 3566779998863100000134689999875444334444678999999999999
Q ss_pred HHHHHH
Q 001052 346 LKMFRK 351 (1172)
Q Consensus 346 ~~~l~~ 351 (1172)
.+.+.+
T Consensus 137 ~~~l~~ 142 (520)
T 1wvf_A 137 YDYIQE 142 (520)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
No 79
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=91.73 E-value=0.22 Score=60.62 Aligned_cols=103 Identities=14% Similarity=0.096 Sum_probs=67.3
Q ss_pred ceEEecCCHHHHHHHHhhC----CCcEEEeccCcceee-eeec-cccCceEEec-CCcccccceee--cCCcEEEccccc
Q 001052 271 LKWYRPLKLQHLLELKSKY----PDSKLLVGNTEVGIE-MRLK-RMQYQVLISV-THVPELNVLNV--KDDGLEIGAAVR 341 (1172)
Q Consensus 271 ~~~~~P~sl~eal~ll~~~----~~a~lvaGgTdl~v~-~k~~-~~~~~~lIdl-~~v~EL~~I~~--~~~~l~IGA~vT 341 (1172)
..+++|+|.+|+.++++.. -..++++|||++.-. +..+ ......+||+ +++..+ .|.. +...++++|+++
T Consensus 37 ~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~~~~~~~v~v~aGv~ 115 (561)
T 2i0k_A 37 TWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNTGGPVATVTAGAGAS 115 (561)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEECCSSSCEEEEETTSB
T ss_pred CEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecCcCCccEEEEcCCCC
Confidence 4689999999998877542 346788999997421 1111 1123478999 776654 4444 457899999999
Q ss_pred HHHHHHHHHHhhhcCCCCccchHHHHHHHHHHhcccccccccccccccccc
Q 001052 342 LTELLKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTA 392 (1172)
Q Consensus 342 l~~l~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~a 392 (1172)
+.+|.+.+.+.=-.++ ..+.+ ..+||||.|++.
T Consensus 116 l~~L~~~l~~~Gl~l~-----------------~~~~~-~~~TvGG~i~~~ 148 (561)
T 2i0k_A 116 IEAIVTELQKHDLGWA-----------------NLPAP-GVLSIGGALAVN 148 (561)
T ss_dssp HHHHHHHHHHTTEECS-----------------SCCSC-TTCBHHHHHHTT
T ss_pred HHHHHHHHHHcCCccc-----------------ccCCC-CCcccCCCcccC
Confidence 9999988654211111 11222 568999999764
No 80
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=91.57 E-value=0.38 Score=57.84 Aligned_cols=153 Identities=14% Similarity=0.103 Sum_probs=88.1
Q ss_pred CceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..-.++|+|.+|+.++++- + -...+.+||+++...- ........+||++++... .|..++..+++||++++.+|
T Consensus 54 P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~-~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~aG~~l~~l 131 (518)
T 3vte_A 54 PLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMS-YISQVPFVVVDLRNMHSI-KIDVHSQTAWVEAGATLGEV 131 (518)
T ss_dssp CSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTT-TCCSSSEEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCc-cCCCCCeEEEECCCCcee-EEeCCCCEEEEeCCccHHHH
Confidence 4578999999998776643 2 2467889999874311 001123579999875544 24445678999999999999
Q ss_pred HHHHHHhhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCCC---------CChhHHHHhcCCEEEEEeCCC
Q 001052 346 LKMFRKVVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASPI---------SDLNPLWMASGAKFHIVDCKG 416 (1172)
Q Consensus 346 ~~~l~~~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp~---------sD~~~~Llal~A~v~l~s~~g 416 (1172)
.+.+.+.-..+ .+. .-+-...+|||++..+... +|.+ -.++++..+|
T Consensus 132 ~~~l~~~g~gl----------------~~~-~G~~~~vgvgG~~~gGg~G~~s~~~G~~~D~V-------~~~evV~adG 187 (518)
T 3vte_A 132 YYWINEKNENL----------------SFP-GGYCPTVGVGGHFSGGGYGALMRNYGLAADNI-------IDAHLVNVDG 187 (518)
T ss_dssp HHHHHHHCTTE----------------ECC-CCSCTTCBHHHHHHTCCCCTTHHHHCCGGGGE-------EEEEEECTTC
T ss_pred HHHHHHhCCCc----------------eec-CCCCCCeeeeeeeCCCCCccccCCCCchhheE-------EEEEEEccCC
Confidence 98764321000 011 1112345688888765432 2322 2456666777
Q ss_pred CeEEEeh--HhhhcccccccCCCCeEEEEEEccC
Q 001052 417 NIRTTMA--EEFFLGYRKVDLTSGEILLSIFLPW 448 (1172)
Q Consensus 417 ~~R~vpl--~dF~~g~~~t~L~~~Eil~~I~iP~ 448 (1172)
......- .|+|-+++-.....=-|||++.+..
T Consensus 188 ~iv~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l 221 (518)
T 3vte_A 188 KVLDRKSMGEDLFWAIRGGGGENFGIIAAWKIKL 221 (518)
T ss_dssp CEECHHHHCHHHHHHHTTSCGGGTCEEEEEEEEC
T ss_pred eEEEeeccccchhhheecccCCCceEEEEEEEEE
Confidence 3332211 3655544322122224899887754
No 81
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=90.81 E-value=11 Score=47.60 Aligned_cols=188 Identities=14% Similarity=0.118 Sum_probs=111.0
Q ss_pred CeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEeC------ccCCCCCCCCCcchHHHHHHH--
Q 001052 785 HSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAAA-- 851 (1172)
Q Consensus 785 ~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFG~K~~~~~~~~~~aA-- 851 (1172)
.++.+..+ .||.++|+++++.. +.+...+|+.||||.++|+|... .-+|.+|++.+...-.++.-|
T Consensus 507 ~~a~v~l~-~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa~ 585 (809)
T 1n62_B 507 DSAEIRIH-PTGSVIARMGTKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAVAAR 585 (809)
T ss_dssp EEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHHHHHH
T ss_pred ccEEEEEe-cCCeEEEEECCCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHHHHH
Confidence 56777777 58899999998655 45678899999999999999864 557889988775433222111
Q ss_pred --------HHHHhCCCC----------EEE------EeChhhhhhh-------------------cC--CCCce-EEEEE
Q 001052 852 --------VPSFLLNRP----------VNL------TLDRDIDMMI-------------------SG--QRHSF-LGKYK 885 (1172)
Q Consensus 852 --------laA~k~gRP----------Vkl------~~tR~E~~~~-------------------~~--~R~~~-~~~~k 885 (1172)
++|..++.+ |.. .++-+|-... .. ...++ .+-.+
T Consensus 586 ~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ga~~ae 665 (809)
T 1n62_B 586 KIKAKAQMIAAHMLEVHEGDLEWDVDRFRVKGLPEKFKTMKELAWASYNSPPPNLEPGLEAVNYYDPPNMTYPFGAYFCI 665 (809)
T ss_dssp HHHHHHHHHHHHHHTSCGGGEEECSSEEEETTEEEEEEEHHHHHHHHHHSCCTTSCSSCEEEEEECCSSCBCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHEEEeCCEEEEccCCCCcccHHHHHHHHhhccCccccccceeeeeccCCCCccceeEEEEE
Confidence 122222211 000 0111111100 00 00122 23347
Q ss_pred EeeCC-CCcEEEEEEeEEecCCCCCCchHH--HHHH--------Hhh-------------ccCCCCCCCeE----EEEEE
Q 001052 886 VGFTN-EGKVLALDLEIYNNAGNSLDLSLA--VLER--------AMF-------------HSDNVYEIPNV----RIMGN 937 (1172)
Q Consensus 886 ~g~d~-dG~i~a~~~~~~~d~Ga~~~~s~~--v~~~--------~~~-------------~~~~~Y~ipn~----~~~~~ 937 (1172)
+-+|. .|++.=.++.+..|+|-..+.... -+.. ++. ....-|.+|.. .++..
T Consensus 666 VeVD~~TG~v~V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i~v~ 745 (809)
T 1n62_B 666 MDIDVDTGVAKTRRFYALDDCGTRINPMIIEGQVHGGLTEAFAVAMGQEIRYDEQGNVLGASFMDFFLPTAVETPKWETD 745 (809)
T ss_dssp EEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCEECTTCCEESCSTTTSCCCCTTTSCCCEEE
T ss_pred EEEECCcCeEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCceEECCCCCCCCCChhhccCCChhhCCCeEEE
Confidence 77876 799999999999999987653211 0111 110 01123544332 35555
Q ss_pred EEecCCCCCCcc--CCCChhhhHHHHHHHHHHHHHHc---CC
Q 001052 938 VCFTNFPSNTAF--RGFGGPQGMLITENWIQRVAVEV---RK 974 (1172)
Q Consensus 938 ~v~TN~~~~ga~--RG~G~~q~~fa~Es~mDelA~~l---g~ 974 (1172)
.+.+..+ .++| +|.|.+...-+.=.+.+-|.+.+ |.
T Consensus 746 ~ve~~~~-~~p~GaKGvGE~~~~~~apAiaNAI~~A~~~~G~ 786 (809)
T 1n62_B 746 YTVTPSP-HHPIGAKGVGESPHVGGVPCFSNAVNDAYAFLNA 786 (809)
T ss_dssp ECCCCCT-TSTTSBCCCTTHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEeCCCC-CCCCCCcccCCcccchHHHHHHHHHHHHHHhcCC
Confidence 6665433 4677 89999888777777777887777 65
No 82
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=90.66 E-value=0.21 Score=61.04 Aligned_cols=49 Identities=27% Similarity=0.478 Sum_probs=41.0
Q ss_pred ceEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCcc-CCCCCceEEEEe
Q 001052 18 TKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCG-EGGCGACTVMVS 70 (1172)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~-~G~CGaCtV~~~ 70 (1172)
+..++|.-+|+.+++ ++++|||+.+++.|+. ...+|+ .|.||.|.|-|.
T Consensus 3 m~~V~~~~sg~~v~v---~~G~tLLeAa~~aGi~-ip~~C~G~G~CGtC~v~V~ 52 (631)
T 3zyy_X 3 EYKVLFKPDQKEVAI---SENTNLMEALNLAGIN-IKTVCGGAGTCGKCLVRVV 52 (631)
T ss_dssp CEEEEEETTTEEEEE---CTTSCHHHHHHHHTCC-CCCSCCCSSCCSTTEEEEE
T ss_pred ceEEEEecCCeEEEE---CCCCcHHHHHHHcCCC-CCcCCCCCCcCCCCEEEEe
Confidence 346778878877654 5899999999998875 889998 899999999875
No 83
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=90.28 E-value=8.8 Score=48.57 Aligned_cols=189 Identities=13% Similarity=0.097 Sum_probs=110.4
Q ss_pred CCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEeC------ccCCCCCCCCCcchHHHHHH--
Q 001052 784 PHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETRSAFIAAAA-- 850 (1172)
Q Consensus 784 p~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~~------~vGGgFG~K~~~~~~~~~~a-- 850 (1172)
..++.+..+ .||.++|+++++.. +.+...+|+.||+|.++|+|... .-+|.+|++.+...-.++.-
T Consensus 500 ~~~a~v~l~-~dG~v~v~~g~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~Aa 578 (803)
T 1ffv_B 500 FDSCEIRIH-PTGSAIARMGTITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPVAGAAIALAA 578 (803)
T ss_dssp CEEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHHHHHHHHHHHH
T ss_pred cccEEEEEe-cCCeEEEEECCcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHHHH
Confidence 356777777 58899999998655 55678899999999999999864 45788888865322211111
Q ss_pred --------HHHHHhCCCC---EEEE-------------eChhhhh---------------hh----cCC--CCce-EEEE
Q 001052 851 --------AVPSFLLNRP---VNLT-------------LDRDIDM---------------MI----SGQ--RHSF-LGKY 884 (1172)
Q Consensus 851 --------AlaA~k~gRP---Vkl~-------------~tR~E~~---------------~~----~~~--R~~~-~~~~ 884 (1172)
.++|..++.+ +.+. ++-.|-. .. ... ..++ .+-.
T Consensus 579 ~~l~~~l~~~aa~~l~~~~~~l~~~~g~v~~~~~~~~~~~~~el~~~a~~~~~~~~~~gl~~~~~~~~~~~~~~~ga~~a 658 (803)
T 1ffv_B 579 RKIHAKARKIAAHMLEVNENDLDWEVDRFKVKGDDSKFKTMADIAWQAYHQPPAGLEPGLEAVHYYDPPNFTYPFGIYLC 658 (803)
T ss_dssp HHHHHHHHHHHHHHTTSCGGGEEECSSEEEESSCTTCEEEHHHHHHHHHHCCCTTCCSSEEEEEEECCSSCBCCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHEEEeCCEEEEcCCCCCccCHHHHHHHHHhccCcccccceeeeeeecCCCCCcceeEEEE
Confidence 1223322211 0000 0000000 00 000 0122 2234
Q ss_pred EEeeCC-CCcEEEEEEeEEecCCCCCCchHH--HHHH--------Hhh-------------ccCCCCCCCeE----EEEE
Q 001052 885 KVGFTN-EGKVLALDLEIYNNAGNSLDLSLA--VLER--------AMF-------------HSDNVYEIPNV----RIMG 936 (1172)
Q Consensus 885 k~g~d~-dG~i~a~~~~~~~d~Ga~~~~s~~--v~~~--------~~~-------------~~~~~Y~ipn~----~~~~ 936 (1172)
++-+|. .|++.=.++....|+|-..+.... -+.. ++. ....-|.+|.. .++.
T Consensus 659 eVeVD~~TG~v~V~r~~~v~D~G~~iNP~~~~gQieGG~~qGiG~aL~Ee~~~d~~G~~~~~~~~dY~ip~~~D~P~i~v 738 (803)
T 1ffv_B 659 VVDIDRATGETKVRRFYALDDCGTRINPMIIEGQIHGGLTEGYAVAMGQQMPFDAQGNLLGNTLMDYFLPTAVETPHWET 738 (803)
T ss_dssp EEEEETTTCCEEEEEEEEEEECBSCSCHHHHHHHHHHHHHHHHHHHHTCCCCBCTTCCBCSCSTTTSCCCCTTTSCCCEE
T ss_pred EEEEEcCCCeEEEEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhCceEECCCCCCCCCCHhhccCCCcccCCCeEE
Confidence 777776 799999999999999987653211 0110 110 01123554433 3555
Q ss_pred EEEecCCCCCCcc--CCCChhhhHHHHHHHHHHHHHHc---CC
Q 001052 937 NVCFTNFPSNTAF--RGFGGPQGMLITENWIQRVAVEV---RK 974 (1172)
Q Consensus 937 ~~v~TN~~~~ga~--RG~G~~q~~fa~Es~mDelA~~l---g~ 974 (1172)
..+.+..+ .++| +|.|.+...-+.=.+.+-|.+.+ |.
T Consensus 739 ~~~e~p~~-~~p~GaKGvGE~~~~~~apAiaNAI~~A~~~~G~ 780 (803)
T 1ffv_B 739 DHTVTPSP-HHPIGAKGVAESPHVGSIPTFTAAVVDAFAHVGV 780 (803)
T ss_dssp EECCCCCT-TSTTCBCCCTTHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEeCCCC-CCCCCCccccCCccchHHHHHHHHHHHHHHccCC
Confidence 66666433 4677 89999988777777788888887 76
No 84
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=89.99 E-value=1.4 Score=52.99 Aligned_cols=76 Identities=7% Similarity=0.039 Sum_probs=54.8
Q ss_pred CceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeec--CCcEEEcccccHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVK--DDGLEIGAAVRLT 343 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~--~~~l~IGA~vTl~ 343 (1172)
..-.++|+|.+|+.++++- + -...+.+||+++..... ......+||++++ +.|+.+ +..+++||++++.
T Consensus 56 p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~--~~~~gvvIdl~~l---~~i~~d~~~~~v~v~aG~~~~ 130 (521)
T 2ipi_A 56 PDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVD--DPAVRAVIDMSQM---RQVFYDSGKRAFAVEPGATLG 130 (521)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGG--CTTCCEEEECTTC---CCEEEETTTTEEEECTTSBHH
T ss_pred CCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcc--cCCCeEEEecccC---CCeEEeCCCCEEEEeCCcCHH
Confidence 4568999999988776543 2 35778899998854211 1223589999875 555544 5689999999999
Q ss_pred HHHHHHH
Q 001052 344 ELLKMFR 350 (1172)
Q Consensus 344 ~l~~~l~ 350 (1172)
+|.+.+.
T Consensus 131 ~l~~~l~ 137 (521)
T 2ipi_A 131 ETYRALY 137 (521)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998763
No 85
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=89.86 E-value=4.6 Score=54.00 Aligned_cols=59 Identities=14% Similarity=0.040 Sum_probs=45.9
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEE------eCccCCCCCCCCC
Q 001052 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCK------TKRIGGGFGGKET 841 (1172)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~------~~~vGGgFG~K~~ 841 (1172)
....++++... .||.++|+++++.. +.+...+|+.||+|.++|+|. .+.-+|.+|++.+
T Consensus 1019 ~~~~~a~v~i~-~DGsv~v~~G~~e~GQG~~T~~aQiaAe~LGip~e~I~v~~~DT~~~P~~~gt~gSr~t 1088 (1335)
T 3zyv_A 1019 YYQAAALVQIY-TDGSVLVAHGGVELGQGINTKMIQVASRELKIPMSYIHLDEMSTVTVPNTVTTGASTGA 1088 (1335)
T ss_dssp GGCEEEEEEEC-TTSCEEECBSCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHH
T ss_pred ccceeEEEEEe-CCCcEEEEECCcCCCCchhHHHHHHHHHHhCCCHHHEEEecCCcCCCCCCCCCcccHHH
Confidence 44567777776 58899999998655 456778899999999999996 4556778888754
No 86
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=89.21 E-value=1.8 Score=52.09 Aligned_cols=157 Identities=11% Similarity=0.081 Sum_probs=88.8
Q ss_pred CceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..-.++|+|.+|+.++++. + -...+.+||+++..... ......+||++++... .+..++..+++|+++++.+|
T Consensus 58 p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~--~~~~gvvIdl~~m~~i-~~d~~~~~v~v~aG~~~~~l 134 (523)
T 2wdx_A 58 PDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVD--NPDVKVIIDMSLLTEI-AYDPSMNAFLIEPGNTLSEV 134 (523)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSS--STTCCEEEECTTCCCE-EEETTTTEEEECTTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCcc--CCCCeEEEEcccCCCE-EEcCCCCEEEEcCCCCHHHH
Confidence 4568999999988776543 2 35778899998754211 1223589999875444 33334568999999999999
Q ss_pred HHHHHH-hhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC--CCChhH--HHHhcCCEEEEEeCCCCeEE
Q 001052 346 LKMFRK-VVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP--ISDLNP--LWMASGAKFHIVDCKGNIRT 420 (1172)
Q Consensus 346 ~~~l~~-~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp--~sD~~~--~Llal~A~v~l~s~~g~~R~ 420 (1172)
.+.+.+ .=-. +.. -+-...++||++..+.. .+-..- .=..+..+|.+...+|..+.
T Consensus 135 ~~~l~~~~Gl~------------------~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~v~~ 195 (523)
T 2wdx_A 135 YEKLYLGWNVT------------------IPG-GVCGGVGVGGHICGGGYGPLSRQFGSVVDYLYAVEVVVVNKQGKARV 195 (523)
T ss_dssp HHHHHHHHSCC------------------CCC-CCCTTCBHHHHHHHTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEE
T ss_pred HHHHHHhcCeE------------------Ecc-CCCCCCeeCccccCCCCCcccccccChhheEEEEEEEEecCCccEEE
Confidence 988642 1111 111 11223478888876532 111000 01123444554445563334
Q ss_pred E--eh----Hh--hhcccccccCCCCeEEEEEEccC
Q 001052 421 T--MA----EE--FFLGYRKVDLTSGEILLSIFLPW 448 (1172)
Q Consensus 421 v--pl----~d--F~~g~~~t~L~~~Eil~~I~iP~ 448 (1172)
+ .- .+ .|-+++--....--|||++.|..
T Consensus 196 ~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l 231 (523)
T 2wdx_A 196 IVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRV 231 (523)
T ss_dssp EEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECC
T ss_pred EecccccCCCChHHHHHhhccCCCCcEEEEEEEEEe
Confidence 4 32 23 55544422222335899988776
No 87
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=88.68 E-value=4.6 Score=51.84 Aligned_cols=189 Identities=10% Similarity=-0.003 Sum_probs=115.4
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHh---CCCCccEEEEe------CccCCCCCCCCCcchHHH
Q 001052 782 LEPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVL---GLPMSKVVCKT------KRIGGGFGGKETRSAFIA 847 (1172)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~L---glp~~kV~V~~------~~vGGgFG~K~~~~~~~~ 847 (1172)
+...++.+..+ .||.++|+++++.. +.+...+|+.| |+|.++|+|.. ++-+|.+|++.+...-.
T Consensus 629 ~~~~~a~v~l~-~DG~v~v~~g~~e~GqG~~T~~aQiaAe~L~~~Gip~~~V~v~~~DT~~~p~~~~t~gSr~t~~~G~- 706 (907)
T 1vlb_A 629 PDASEAWAELN-ADGTITVHTAWEDHGQGADIGCVGTAHEALRPMGVAPEKIKFTWPNTATTPNSGPSGGSRQQVMTGN- 706 (907)
T ss_dssp TCEEEEEEEEC-TTSCEEEECCCCCSSSCHHHHHHHHHHHHHGGGTCCGGGEEECCCBTTTSCCCCCSCTTCHHHHHHH-
T ss_pred CCCccEEEEEe-CCCeEEEEECCccCCCCHHHHHHHHHHHHHhhcCCCHHHEEEecCCCCCCCCCCCCccchHHHHHHH-
Confidence 34567788887 58899999998655 45678899999 99999999985 45678888886532222
Q ss_pred HHHHHHHHhCCC---C-----------------E--EEEeChhh--hhhh-cCC-C--C--ce-EEEEEEeeCCC-CcEE
Q 001052 848 AAAAVPSFLLNR---P-----------------V--NLTLDRDI--DMMI-SGQ-R--H--SF-LGKYKVGFTNE-GKVL 895 (1172)
Q Consensus 848 ~~aAlaA~k~gR---P-----------------V--kl~~tR~E--~~~~-~~~-R--~--~~-~~~~k~g~d~d-G~i~ 895 (1172)
++-.||.++.+ + . ...+.-.. .+.. ++. . . ++ .+-.++.+|.+ |++.
T Consensus 707 -Av~~Aa~~l~~~l~~~aa~~l~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ga~~aEVeVD~~TG~v~ 785 (907)
T 1vlb_A 707 -AIRVACENLLKACEKPGGGYYTYDELKAADKPTKITGNWTASGATHCDAVTGLGKPFVVYMYGVFMAEVTVDVATGQTT 785 (907)
T ss_dssp -HHHHHHHHHHHHHBCTTSSBCCHHHHHHTTCCCEEEEEEECTTCBCCCTTTCCSBCCSCEEEEEEEEEEEEETTTCCEE
T ss_pred -HHHHHHHHHHHHHHHHhhccCCHHHHHhhcccccccceecCCCccccccccCCCCCCCCcceEEEEEEEEEECCCCcEE
Confidence 22222333211 1 0 00111000 0000 011 1 1 22 23457888864 9999
Q ss_pred EEEEeEEecCCCCCCchHH--HHHH----H----h---------hccCCCCCCCeE----E-EEEEEEecCCCCCCcc--
Q 001052 896 ALDLEIYNNAGNSLDLSLA--VLER----A----M---------FHSDNVYEIPNV----R-IMGNVCFTNFPSNTAF-- 949 (1172)
Q Consensus 896 a~~~~~~~d~Ga~~~~s~~--v~~~----~----~---------~~~~~~Y~ipn~----~-~~~~~v~TN~~~~ga~-- 949 (1172)
=.++....|+|-..+.... -+.. . + .....-|.+|.. . ++...+.++.+ .++|
T Consensus 786 V~r~~~v~D~G~viNP~~~~gQieGG~~qGlG~aL~Ee~~G~~~~~~~~dY~ip~~~D~P~~i~v~~ve~~~~-~~p~Ga 864 (907)
T 1vlb_A 786 VDGMTLMADLGSLCNQLATDGQIYGGLAQGIGLALSEDFEDIKKHATLVGAGFPFIKQIPDKLDIVYVNHPRP-DGPFGA 864 (907)
T ss_dssp EEEEEEEEECSSCSCHHHHHHHHHHHHHHHHHHHHTCCCCSTTTSSSTTTTTCCCGGGSCSCEEEEECCCCCT-TSGGGC
T ss_pred EEEEEEEEECCccCCHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCCChhhCcCCChHhCCCcEEEEEecCCCC-CCCCcC
Confidence 9999999999987653211 0111 0 0 011234655543 2 66677777666 4677
Q ss_pred CCCChhhhHHHHHHHHHHHHHHcCC
Q 001052 950 RGFGGPQGMLITENWIQRVAVEVRK 974 (1172)
Q Consensus 950 RG~G~~q~~fa~Es~mDelA~~lg~ 974 (1172)
+|.|.+...-+.=.+.+-+.+.+|.
T Consensus 865 KGvGE~~~~~~~~AIaNAv~~A~G~ 889 (907)
T 1vlb_A 865 SGVGELPLTSPHAAIINAIKSATGV 889 (907)
T ss_dssp CCCTTGGGSSHHHHHHHHHHHHHSC
T ss_pred ccccccccchHHHHHHHHHHHhhCC
Confidence 7999988887777888888888876
No 88
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=88.07 E-value=3.9 Score=48.95 Aligned_cols=77 Identities=8% Similarity=0.003 Sum_probs=55.1
Q ss_pred CceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..-+++|+|.+|+.++++. + -...+.+||+++...- ........+||++++..+ .+. +++.+++||++++.+|
T Consensus 43 p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~-~~~~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l 119 (503)
T 1zr6_A 43 PAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYG-FGGEDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYT 119 (503)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTT-TTSSSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCc-ccCCCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHH
Confidence 4568999999988876543 2 3578889999986411 111233589999876544 333 4668999999999999
Q ss_pred HHHH
Q 001052 346 LKMF 349 (1172)
Q Consensus 346 ~~~l 349 (1172)
.+.+
T Consensus 120 ~~~l 123 (503)
T 1zr6_A 120 ALEL 123 (503)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
No 89
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=87.03 E-value=3.9 Score=48.90 Aligned_cols=77 Identities=6% Similarity=0.110 Sum_probs=54.7
Q ss_pred CceEEecCCHHHHHHHHh---hC-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKS---KY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~---~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
..-.++|+|.+|+.++++ ++ -...+.+||+++.... .......+||++++..+ .|..++..+++||++++.+|
T Consensus 35 P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~--~~~~~gvvIdl~~l~~i-~vd~~~~~v~v~aG~~~~~l 111 (501)
T 3pop_A 35 PEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFV--GTPRRDLVLDLHNLHAI-GPAADGAGVRVGSGATVDQV 111 (501)
T ss_dssp CSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTT--TSSCCSEEEECTTCCCE-EECTTSSSEEEETTCBHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCcc--ccCCCEEEEEecccCCe-EEcCCCCEEEEECCcCHHHH
Confidence 456899999998877654 33 2577889999885421 11123589999886543 23334567999999999999
Q ss_pred HHHH
Q 001052 346 LKMF 349 (1172)
Q Consensus 346 ~~~l 349 (1172)
.+.+
T Consensus 112 ~~~l 115 (501)
T 3pop_A 112 QKAL 115 (501)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
No 90
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=85.10 E-value=1.9 Score=56.02 Aligned_cols=84 Identities=18% Similarity=0.142 Sum_probs=60.3
Q ss_pred CcceEEEEEECCEEEEecCCCCCCcHHHHHhhCCCC----CcccC------ccCCCCCceEEEEeccccCCCcccceeec
Q 001052 16 GWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLT----GTKLG------CGEGGCGACTVMVSRYDKKSKKCVHCAVN 85 (1172)
Q Consensus 16 ~~~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~----g~k~g------C~~G~CGaCtV~~~~~~~~~~~~~~~~v~ 85 (1172)
..+..++|++||+.++.. ++.||+..|...|.. +.|.+ |+.|.|..|.|.++.. .+|......++
T Consensus 18 ~~~~~~~~~~dG~~~~~~---~g~tv~~aL~~~Gv~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~--~~g~~~~~~~~ 92 (965)
T 2gag_A 18 NREEALSLTVDGAKLSAF---RGDTVASALLANGVRRAGNSLYLDRPRGIFAAGVEEPNALVTVSAR--HEQDIDESMLP 92 (965)
T ss_dssp EEEEEEEEEETTEEEEEE---ETCBHHHHHHHTTCCBCSCCTTTCCCCBCCCSSTTCCSCEEEECCC--STTCCCEEEEE
T ss_pred CCCCeEEEEECCEEEEec---CCCHHHHHHHHcCCeEeecCCCCCCCcccccCCccCCceEEEEccC--CCCCcCCcccc
Confidence 345689999999998764 689999988764332 12222 7889999999999810 01222224689
Q ss_pred ccccchhccCCceEEEeeccc
Q 001052 86 ACLAPLYSLEGMHVITVEGVG 106 (1172)
Q Consensus 86 sCl~~~~~~~g~~i~T~Egl~ 106 (1172)
+|.+++ -+|..|+|..|++
T Consensus 93 ac~~~~--~~gm~~~~~~glg 111 (965)
T 2gag_A 93 ATTVPV--TEDLNATLLSGLG 111 (965)
T ss_dssp GGGCBC--CTTEEEEECSSCB
T ss_pred ceeeec--ccceEeecccCCC
Confidence 998886 4899999988887
No 91
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=84.44 E-value=4.6 Score=48.59 Aligned_cols=157 Identities=11% Similarity=0.105 Sum_probs=89.0
Q ss_pred CceEEecCCHHHHHHHHh---hC-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKS---KY-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~---~~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
....++|+|.+|+.++++ ++ -...+.+||+++..... ......+||++++... .+..++..+++||++++.+|
T Consensus 59 p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~--~~~~gvvIdl~~l~~i-~~d~~~~~v~v~aG~~~~~l 135 (530)
T 2y3s_A 59 PEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVA--NSDVRVVMDMSRLSAV-GFDEERGAFAVEAGATLGAV 135 (530)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTT--CTTCCEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc--cCCCeEEEEcccCCCE-EEcCCCCEEEEeCCCCHHHH
Confidence 456899999998877654 33 35778899998754211 1123589999875444 33334468999999999999
Q ss_pred HHHHHH-hhhcCCCCccchHHHHHHHHHHhccccccccccccccccccCC--CCChhH--HHHhcCCEEEEEeCCCCeEE
Q 001052 346 LKMFRK-VVTERPAHETSSCKAFIEQIKWFAGTQIKNVASVGGNICTASP--ISDLNP--LWMASGAKFHIVDCKGNIRT 420 (1172)
Q Consensus 346 ~~~l~~-~~~~~~~~~~~~~~~L~~~l~~ias~qIRN~aTiGGNI~~asp--~sD~~~--~Llal~A~v~l~s~~g~~R~ 420 (1172)
.+.+.+ .=-. +.. -+-...++||++..+.- .+-..- .=..++.+|.+...+|..+.
T Consensus 136 ~~~l~~~~Gl~------------------~~~-G~~~~vgvgG~~~gGg~g~~s~~~G~~~D~v~~~evV~~d~~G~i~~ 196 (530)
T 2y3s_A 136 YKTLFRVWGVT------------------LPG-GACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDART 196 (530)
T ss_dssp HHHHHHHHSCC------------------CCC-CSCTTCBHHHHHHTTCCCTTHHHHCCGGGGEEEEEEEEECTTSCEEE
T ss_pred HHHHHhhcCeE------------------EeC-CCCCCCCcCCCcCCCCCCcccccccchhhheeeEEEEEecCCCcEEE
Confidence 987642 1001 111 11123467888876532 110000 01223444554445563333
Q ss_pred E--eh------HhhhcccccccCCCCeEEEEEEccC
Q 001052 421 T--MA------EEFFLGYRKVDLTSGEILLSIFLPW 448 (1172)
Q Consensus 421 v--pl------~dF~~g~~~t~L~~~Eil~~I~iP~ 448 (1172)
+ .- .|.|-+++-.....--|||++.+..
T Consensus 197 v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l 232 (530)
T 2y3s_A 197 VIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRT 232 (530)
T ss_dssp EEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred EeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEe
Confidence 4 32 2366555433333446899998876
No 92
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=83.79 E-value=1.8 Score=51.09 Aligned_cols=77 Identities=10% Similarity=0.033 Sum_probs=56.0
Q ss_pred CceEEecCCHHHHHHHHhh---C-CCcEEEeccCcceeeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHHH
Q 001052 270 GLKWYRPLKLQHLLELKSK---Y-PDSKLLVGNTEVGIEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTEL 345 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll~~---~-~~a~lvaGgTdl~v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~l 345 (1172)
....++|+|.+|+.++++. + -...+.+||+++... .......+||++++..+ .+..++..+++||++++.+|
T Consensus 39 p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~---~~~~~gvvi~l~~l~~i-~~d~~~~~v~v~aG~~~~~l 114 (459)
T 2bvf_A 39 PSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGY---ATNDGGIVLDLRLMNSI-HIDTAGSRARIGGGVISGDL 114 (459)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCT---TCCSSSEEEECTTCCCE-EEETTTTEEEEETTCBHHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCc---cccCCeEEEECCCCCCE-EECCCCCEEEECCCCCHHHH
Confidence 4568899999998876643 2 357889999998542 11334689999876544 23334568999999999999
Q ss_pred HHHHH
Q 001052 346 LKMFR 350 (1172)
Q Consensus 346 ~~~l~ 350 (1172)
.+.+.
T Consensus 115 ~~~l~ 119 (459)
T 2bvf_A 115 VKEAA 119 (459)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 93
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=78.27 E-value=3.5 Score=48.23 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=42.4
Q ss_pred ccccceEEEEeeCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchh
Q 001052 1052 MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASS 1121 (1172)
Q Consensus 1052 ~~~~~a~V~v~~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t 1121 (1172)
+....+....+.||+++|.++. |+. +.+...+|+.||+|.++|+|... ..++.+|++..
T Consensus 186 mEp~~~~A~~~~~g~l~v~~st----Q~p-~~~r~~vA~~Lglp~~~VrV~~~------~vGGgFG~K~~ 244 (425)
T 3hrd_A 186 IEPDAGVSYYDNEGMLTVVVST----QNP-HYDRGEVAGMLALPNSKVRIIQA------TTGGGFGGKLD 244 (425)
T ss_dssp SSCCEEEEEECTTCCEEEEECC----SCH-HHHHHHHHHHTTCCGGGEEEEEC------BCCCCTTTTSS
T ss_pred CCCceEEEEECCCCeEEEEECC----CCH-HHHHHHHHHHhCCChhhEEEEeC------CCCCCCCCCcc
Confidence 3445566666668999999874 554 45567788999999999999954 34556666654
No 94
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=71.61 E-value=3.9 Score=51.39 Aligned_cols=60 Identities=15% Similarity=0.171 Sum_probs=46.3
Q ss_pred CCCCeEEEEEecCCCeEEEEeCCCCh----H-HHHHHHHHHhCCCCccEEEEeC------ccCCCCCCCCCc
Q 001052 782 LEPHSSVVWTMDHGNEVHMISSTQAP----Q-KHQKYVSHVLGLPMSKVVCKTK------RIGGGFGGKETR 842 (1172)
Q Consensus 782 mEp~~a~A~~~~~~g~l~V~~stQ~p----~-~~r~~vA~~Lglp~~kV~V~~~------~vGGgFG~K~~~ 842 (1172)
+.+.++.+..+ .||.++|+++++.. + .+...+|+.||||.++|+|... +-+|.+|++.+.
T Consensus 444 ~~~~~a~v~l~-~DG~v~v~~g~~e~GQG~~T~~aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t~ 514 (755)
T 3nvz_C 444 LNQAGALIHVY-TDGSVLVSHGGTEMGQGLHTKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTD 514 (755)
T ss_dssp GCEEEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHH
T ss_pred CCcceEEEEEe-cCCeEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHHH
Confidence 45677888877 58899999998543 3 4567789999999999999654 447888888653
No 95
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=65.96 E-value=7.9 Score=48.81 Aligned_cols=59 Identities=12% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCCeEEEEEecCCCeEEEEeCCCCh-----HHHHHHHHHHhCCCCccEEEEe------CccCCCCCCCCCc
Q 001052 783 EPHSSVVWTMDHGNEVHMISSTQAP-----QKHQKYVSHVLGLPMSKVVCKT------KRIGGGFGGKETR 842 (1172)
Q Consensus 783 Ep~~a~A~~~~~~g~l~V~~stQ~p-----~~~r~~vA~~Lglp~~kV~V~~------~~vGGgFG~K~~~ 842 (1172)
...++.+..+ .||.++|+++++.. +.+...+|+.||||.++|+|.. +.-+|.+|++.+.
T Consensus 465 ~~~~a~v~l~-~DG~v~v~~g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~ 534 (777)
T 2w3s_B 465 NQAGALVQIY-TDGSVALNHGGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGAD 534 (777)
T ss_dssp CEEEEEEEEC-TTSCEEEEESCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHH
T ss_pred CCCceEEEEc-cCCeEEEEECCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHH
Confidence 3456777777 58899999988554 4567889999999999999974 5668888888653
No 96
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=64.72 E-value=14 Score=33.21 Aligned_cols=41 Identities=17% Similarity=0.122 Sum_probs=27.8
Q ss_pred ceEEEEEECCEEEEecCCCCC-CcHHHHHhhCCCCCcccCccCCCCCceEEEEec
Q 001052 18 TKEAILYVNGLRKVLPDGLAH-LTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1172)
Q Consensus 18 ~~~i~~~~Ng~~~~~~~~~p~-~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1172)
...+.++|||+++++ +.. .||.++|+++++.. ..+.|.+|+
T Consensus 18 ~~~M~I~vNGe~~el---~~~~~Tv~dLL~~L~~~~----------~~vaVavNg 59 (87)
T 1tyg_B 18 GGRHMLQLNGKDVKW---KKDTGTIQDLLASYQLEN----------KIVIVERNK 59 (87)
T ss_dssp ----CEEETTEEECC---SSSCCBHHHHHHHTTCTT----------SCCEEEETT
T ss_pred CcceEEEECCEEEEC---CCCCCcHHHHHHHhCCCC----------CCEEEEECC
Confidence 345678999998875 355 89999999887652 234688875
No 97
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=60.81 E-value=9.8 Score=45.34 Aligned_cols=80 Identities=11% Similarity=0.157 Sum_probs=51.8
Q ss_pred CceEEecCCHHHHHHHH---hhCC-CcEEEeccCcce-eeeeeccccCceEEecCCcccccceeecCCcEEEcccccHHH
Q 001052 270 GLKWYRPLKLQHLLELK---SKYP-DSKLLVGNTEVG-IEMRLKRMQYQVLISVTHVPELNVLNVKDDGLEIGAAVRLTE 344 (1172)
Q Consensus 270 ~~~~~~P~sl~eal~ll---~~~~-~a~lvaGgTdl~-v~~k~~~~~~~~lIdl~~v~EL~~I~~~~~~l~IGA~vTl~~ 344 (1172)
..-.++|+|.+|..+++ +++. ...+-+||++.. ............+||++++... .|..+...++||+++++.+
T Consensus 53 P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~ 131 (500)
T 3tsh_A 53 PLYIITPTQVSHIQSAVVCGRRHSVRIRVRSGGHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGE 131 (500)
T ss_dssp CSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcCCcCCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHH
Confidence 34578999988876654 3442 345567887642 1111112233578999986543 3444567799999999999
Q ss_pred HHHHHH
Q 001052 345 LLKMFR 350 (1172)
Q Consensus 345 l~~~l~ 350 (1172)
+.+.+.
T Consensus 132 ~~~~l~ 137 (500)
T 3tsh_A 132 LYYAIY 137 (500)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988754
No 98
>2nlv_A XISI protein-like; XISI-like protein, structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.30A {Anabaena variabilis} SCOP: d.326.1.1
Probab=53.66 E-value=15 Score=34.61 Aligned_cols=39 Identities=13% Similarity=0.336 Sum_probs=31.2
Q ss_pred ceEEEEe-eCCeEEEEeCCccCCCChHHHHHHHHHHHh---CCCCCcEEEEeC
Q 001052 1056 GALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSET 1104 (1172)
Q Consensus 1056 ~a~V~v~-~DGsV~V~~g~~e~GQG~~T~~~QIaAe~L---gip~e~V~v~~~ 1104 (1172)
++.|+++ .||+|.|..-++|.| +|++| |||.++|-+.--
T Consensus 57 g~~iHidIkd~KIWIq~d~TE~g----------Ia~eLv~~GVpk~dIVLgF~ 99 (112)
T 2nlv_A 57 RCVIHFDIKDGKIWLQQNLTDRN----------PAEELVMMGVPREDIVLGLQ 99 (112)
T ss_dssp EEEEEEEEETTEEEEEEECSSSC----------HHHHHHHTTCCGGGEEETTS
T ss_pred EEEEEEEEECCeEEEEeCCcccc----------HHHHHHHcCCCHHHEEEccC
Confidence 5677777 799999999999977 34444 999999987643
No 99
>3d7q_A XISI protein-like; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.30A {Nostoc punctiforme pcc 73102}
Probab=53.40 E-value=15 Score=34.58 Aligned_cols=38 Identities=13% Similarity=0.306 Sum_probs=30.8
Q ss_pred ceEEEEe-eCCeEEEEeCCccCCCChHHHHHHHHHHHh---CCCCCcEEEEe
Q 001052 1056 GALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAF---NIPLSSVFVSE 1103 (1172)
Q Consensus 1056 ~a~V~v~-~DGsV~V~~g~~e~GQG~~T~~~QIaAe~L---gip~e~V~v~~ 1103 (1172)
++.|+++ .||+|.|..-++|.| +|++| |||.++|-+.-
T Consensus 57 g~~iHidIkd~KIWIq~d~TE~g----------Ia~eLv~~GVpk~dIVLgF 98 (112)
T 3d7q_A 57 GPIMHLDIKNNKIWIQQNTTEAD----------IALELMEMGIDKQDIVIGF 98 (112)
T ss_dssp EEEEEEEEETTEEEEEEECSSCC----------HHHHHHTTTCCGGGEEETT
T ss_pred EEEEEEEEECCeEEEEeCCcccc----------HHHHHHHcCCCHHHEEEcc
Confidence 5677777 799999999999987 44554 99999998753
No 100
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=53.23 E-value=37 Score=29.22 Aligned_cols=61 Identities=11% Similarity=0.134 Sum_probs=38.4
Q ss_pred EEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhcc-CCceEE
Q 001052 22 ILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSL-EGMHVI 100 (1172)
Q Consensus 22 ~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~-~g~~i~ 100 (1172)
.++|||+++++ +.+||.++|.++++..- .|.|.+|+ .-|..--..-..+ +|-.|.
T Consensus 2 ~I~vNG~~~e~----~~~Tl~~LL~~l~~~~~----------~vAV~vNg----------~iVpr~~~~~~~L~dGD~ve 57 (73)
T 2kl0_A 2 LVTINGEQREV----QSASVAALMTELDCTGG----------HFAVALNY----------DVVPRGKWDETPVTAGDEIE 57 (73)
T ss_dssp CEEETTEEECC----CCSBHHHHHHHTTCCSS----------SCEEEESS----------SEECHHHHTTCBCCTTCEEE
T ss_pred EEEECCEEEEc----CCCcHHHHHHHcCCCCC----------cEEEEECC----------EECChHHcCcccCCCCCEEE
Confidence 47899998764 46999999999887632 24788875 2233222211122 677776
Q ss_pred Eeeccc
Q 001052 101 TVEGVG 106 (1172)
Q Consensus 101 T~Egl~ 106 (1172)
-+--++
T Consensus 58 Iv~~Vg 63 (73)
T 2kl0_A 58 ILTPRQ 63 (73)
T ss_dssp EECCCC
T ss_pred EEcccc
Confidence 666554
No 101
>2nwv_A XISI protein-like; YP_323822.1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; 1.85A {Anabaena variabilis} SCOP: d.326.1.1
Probab=52.39 E-value=16 Score=34.49 Aligned_cols=38 Identities=13% Similarity=0.256 Sum_probs=30.8
Q ss_pred ceEEEEe-eCCeEEEEeCCccCCCChHHHHHHHHHHH---hCCCCCcEEEEe
Q 001052 1056 GALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASA---FNIPLSSVFVSE 1103 (1172)
Q Consensus 1056 ~a~V~v~-~DGsV~V~~g~~e~GQG~~T~~~QIaAe~---Lgip~e~V~v~~ 1103 (1172)
++.|+++ .||+|.|..-++|.| +|++ +|||.++|-+.-
T Consensus 59 g~~iHidIkd~KIWIq~d~TE~g----------Ia~eLv~~GVpk~dIVLgF 100 (114)
T 2nwv_A 59 YTYVHIRIKNEKIYIEEDYTEEG----------IATELMRLGVTNNDIVLAF 100 (114)
T ss_dssp EEEEEEEEETTEEEEEEECCSSC----------HHHHHHHTTCCGGGEEETT
T ss_pred EEEEEEEEECCeEEEEeCCcccc----------HHHHHHHcCCCHHHEEEcc
Confidence 5677777 799999999999977 3444 499999998764
No 102
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=51.64 E-value=8.5 Score=33.44 Aligned_cols=43 Identities=19% Similarity=0.125 Sum_probs=32.4
Q ss_pred eEEEEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEec
Q 001052 19 KEAILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1172)
Q Consensus 19 ~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1172)
|+++++|||+.....+++++.|+.++|++.|+..-. +.|++|+
T Consensus 1 M~v~Vkl~g~~~~~~ev~~g~Tv~dLL~~Lgl~~~~----------VvV~vNG 43 (74)
T 2l32_A 1 MNVTVEVVGEETSEVAVDDDGTYADLVRAVDLSPHE----------VTVLVDG 43 (74)
T ss_dssp CEEEEECSSSSEEEEECSTTCSHHHHHHTTCCCSSC----------CCEECCC
T ss_pred CEEEEEEeCccceeEEcCCCCcHHHHHHHcCCCcce----------EEEEECC
Confidence 678999999862222477899999999998887542 2588886
No 103
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=49.15 E-value=34 Score=45.62 Aligned_cols=59 Identities=10% Similarity=0.165 Sum_probs=42.9
Q ss_pred ccccceEEEEe-eCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCCccCcccchh
Q 001052 1052 MNQAGALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDKVPNASPTAASASS 1121 (1172)
Q Consensus 1052 ~~~~~a~V~v~-~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~~p~~~~t~~Sr~t 1121 (1172)
+....+....+ .||+++|.++. |+. +.+...+|+.||+|.++|+|... .-++.+|++.+
T Consensus 744 mEp~~~~A~~~~~~g~l~v~~sT----Q~p-~~~r~~vA~~Lglp~~kVrV~~~------~vGGgFG~K~~ 803 (1332)
T 3unc_A 744 LETHCTIAIPKGEEGEMELFVST----QNA-MKTQSFVAKMLGVPVNRILVRVK------RMGGGFGGKET 803 (1332)
T ss_dssp SSCCEEEEEECSSTTCEEEEECC----SCH-HHHHHHHHHHHTCCGGGEEEEEC------CCSCCTTTTSS
T ss_pred CCCceEEEEEeCCCCeEEEEECC----CCH-HHHHHHHHHHhCCCchhEEEEeC------CCCCCCCCCCc
Confidence 34455666665 68999999874 554 45566788999999999999954 45666777764
No 104
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=41.84 E-value=16 Score=32.07 Aligned_cols=40 Identities=25% Similarity=0.292 Sum_probs=28.5
Q ss_pred EEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEec
Q 001052 22 ILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1172)
Q Consensus 22 ~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1172)
.++|||+++++. ....+||.++|.++++... -.|.|.+|+
T Consensus 2 ~I~vNGe~~e~~-~~~~~Tl~~LL~~l~~~~~---------~~vAVavNg 41 (78)
T 2k5p_A 2 NLTVNGKPSTVD-GAESLNVTELLSALKVAQA---------EYVTVELNG 41 (78)
T ss_dssp EEEETTEEEECS-SCSCEEHHHHHHHHTCSCT---------TTCCEEETT
T ss_pred EEEECCEEEEcC-CCCCCcHHHHHHHcCCCCC---------CcEEEEECC
Confidence 579999998763 2146999999998887611 124688875
No 105
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=38.43 E-value=19 Score=30.12 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=26.9
Q ss_pred EEEECCEEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEec
Q 001052 22 ILYVNGLRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSR 71 (1172)
Q Consensus 22 ~~~~Ng~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~ 71 (1172)
.++|||+.+++ +...|+.++|+..++.. ..+.|.+|+
T Consensus 2 ~i~vNg~~~~~---~~~~tv~~ll~~l~~~~----------~~v~vavN~ 38 (66)
T 1f0z_A 2 QILFNDQAMQC---AAGQTVHELLEQLDQRQ----------AGAALAINQ 38 (66)
T ss_dssp CEEESSCEECC---CTTCCHHHHHHHHTCCC----------SSEEEEETT
T ss_pred EEEECCEEEEc---CCCCcHHHHHHHcCCCC----------CCEEEEECC
Confidence 47999998865 45789999999876541 234677775
No 106
>2nvm_A FDXN element excision controlling factor XISI; YP_321976.1, structural genomics, PSI-2, protein structure initiative; 2.19A {Anabaena variabilis atcc 29413} SCOP: d.326.1.1
Probab=34.17 E-value=39 Score=32.22 Aligned_cols=38 Identities=8% Similarity=0.282 Sum_probs=30.1
Q ss_pred ceEEEEe-eCCeEEEEeCCccCCCChHHHHHHHHHHH---hCCCCCcEEEEe
Q 001052 1056 GALVHVY-TDGTVLVTHGGVEMGQGLHTKVAQVAASA---FNIPLSSVFVSE 1103 (1172)
Q Consensus 1056 ~a~V~v~-~DGsV~V~~g~~e~GQG~~T~~~QIaAe~---Lgip~e~V~v~~ 1103 (1172)
++.++++ .||+|.|..-++|.| +|++ +|||.++|-+.-
T Consensus 71 ~~iiHldIkdgKIWIq~D~TE~g----------Ia~eLv~~GIPk~DIVLgF 112 (126)
T 2nvm_A 71 HIILYLQIQNGKIWIEEDSTNLA----------IVDEMLVAGIPQTDIILGF 112 (126)
T ss_dssp EEEEEEEEETTEEEEEECSSTTH----------HHHHHHHTTCCGGGEEETT
T ss_pred EEEEEEEEeCCeEEEEeCCchhh----------HHHHHHHcCCCHHHEEEcc
Confidence 5677776 799999999999976 3444 399999998763
No 107
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=29.10 E-value=1.2e+02 Score=31.64 Aligned_cols=24 Identities=17% Similarity=0.138 Sum_probs=19.4
Q ss_pred eeecCCcEEEcccccHHHHHHHHH
Q 001052 327 LNVKDDGLEIGAAVRLTELLKMFR 350 (1172)
Q Consensus 327 I~~~~~~l~IGA~vTl~~l~~~l~ 350 (1172)
|..++..++++|++++.+|.+.+.
T Consensus 3 vd~~~~~v~V~aGv~l~~L~~~l~ 26 (219)
T 2yvs_A 3 VHAADQYLVAPGEADLLEVHARLA 26 (219)
T ss_dssp EETTTTEEEEETTCCHHHHHHHHT
T ss_pred EcCCCCEEEEcCCCcHHHHHHHHH
Confidence 344567899999999999998763
No 108
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=28.55 E-value=19 Score=38.59 Aligned_cols=17 Identities=35% Similarity=0.860 Sum_probs=14.6
Q ss_pred ccCccCCCCCceEEEEe
Q 001052 54 KLGCGEGGCGACTVMVS 70 (1172)
Q Consensus 54 k~gC~~G~CGaCtV~~~ 70 (1172)
+..||.|.||+|+|-..
T Consensus 223 ~m~CG~G~C~~C~~~~~ 239 (262)
T 1ep3_B 223 RMACGIGACYACVEHDK 239 (262)
T ss_dssp CCSSSSSSSCTTEEEET
T ss_pred cccCcccccccCCcccc
Confidence 45899999999999764
No 109
>2dl6_A Chromodomain-helicase-DNA-binding protein 8; BRK, CHD8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.76.2.1
Probab=27.39 E-value=25 Score=31.19 Aligned_cols=49 Identities=18% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCCCChhhhhhcCCCcceEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCC
Q 001052 2 GSLKNEEEMEQMGEGWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLT 51 (1172)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~ 51 (1172)
||+++|..+.. ....+-.+.=+-+|++..-+.+.+...|.+|||++ +.+
T Consensus 4 ~~~k~p~~ld~-~~EerVpVi~~~tG~~l~G~~AP~~k~L~~WLk~nP~y~ 53 (83)
T 2dl6_A 4 GSSGEPNHLDV-DLETRIPVINKVDGTLLVGEDAPRRAELEMWLQGHPEFA 53 (83)
T ss_dssp SCCCCCCCCCC-CTTSBCCEECSSSCCEECGGGSCBSTTHHHHHHHCTTSC
T ss_pred CCCCCCCcccC-CCCcceeeEeCCCCccccCCCchhHhHHHHHHhHCCCCE
Confidence 77888887774 33333333334578888877788899999999987 653
No 110
>1erd_A Pheromone ER-2; NMR {Euplotes raikovi} SCOP: a.10.1.1
Probab=23.70 E-value=40 Score=24.32 Aligned_cols=28 Identities=14% Similarity=0.532 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCCCCCchHHHHHHHHHH
Q 001052 115 IQESLVRSHGSQCGFCTPGFIMSMYSLL 142 (1172)
Q Consensus 115 iq~a~~~~~~~qCG~CtpG~vm~~~~ll 142 (1172)
..|||+.+.-.-||||.--.-|+...+-
T Consensus 5 ceqamascehtmcgycqgplymtcigit 32 (40)
T 1erd_A 5 CEQAMASCEHTMCGYCQGPLYMTCIGIT 32 (40)
T ss_dssp HHHHHHHTCGGGGGGSCHHHHHHHHHHH
T ss_pred HHHHHHhccccccccccCCeeEEEEeec
Confidence 4789999999999999998888887764
No 111
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=23.69 E-value=36 Score=27.72 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=25.3
Q ss_pred HHHHHHHHhCCCCccEEEEeCccCC---CCCCCC
Q 001052 810 HQKYVSHVLGLPMSKVVCKTKRIGG---GFGGKE 840 (1172)
Q Consensus 810 ~r~~vA~~Lglp~~kV~V~~~~vGG---gFG~K~ 840 (1172)
+-..+++.||+|++.|.|....+-. ||||+.
T Consensus 24 lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (64)
T 3abf_A 24 LTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVL 57 (64)
T ss_dssp HHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred HHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 3467889999999999999887775 788763
No 112
>1v86_A DNA segment, CHR 7, wayne state university 128, expressed; ubiquitin fold, structural genomics, D7WSU128E protein; HET: DNA; NMR {Mus musculus} SCOP: d.15.1.1
Probab=23.39 E-value=81 Score=28.25 Aligned_cols=36 Identities=17% Similarity=0.010 Sum_probs=27.2
Q ss_pred CcceEEEEEECCEEEEecCCCCCCcHHHHHhhC-CCCC
Q 001052 16 GWTKEAILYVNGLRKVLPDGLAHLTLLEYLRDI-GLTG 52 (1172)
Q Consensus 16 ~~~~~i~~~~Ng~~~~~~~~~p~~~L~~~LR~~-~l~g 52 (1172)
...+.|.+..+|+.+.++ ++++.|+.++-... ..+|
T Consensus 15 ~~~~~i~Vk~~g~~~~i~-v~~~~TV~~LK~~I~~~tg 51 (95)
T 1v86_A 15 KELVDLKIIWNKTKHDVK-VPLDSTGSELKQKIHSITG 51 (95)
T ss_dssp CCCEEEEEEETTEEEEEE-ECTTSBHHHHHHHHHHHHC
T ss_pred CceEEEEEEECCEEEEEE-ECCCCcHHHHHHHHHHHHC
Confidence 445777888899999996 99999998876642 4444
No 113
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=22.14 E-value=1.9e+02 Score=33.01 Aligned_cols=69 Identities=16% Similarity=0.163 Sum_probs=40.6
Q ss_pred CCCeEeeccC-hhhhccCCCEEEEEecCCCCCCCCCCCCCCCccccccCeEEecCCeEEEEEECCHHHHH----HhcccC
Q 001052 646 RPHARILSID-DSGARSSPGFVGIFFAEDVQGDNRIGPVVADEELFASEVVTCVGQVIGVVVAETHEEAK----LASRKV 720 (1172)
Q Consensus 646 ~a~a~I~sID-~s~A~~~pGVv~Vvt~~Dipg~n~~~~~~~d~~~la~~~V~y~GqpVa~VvAet~~~A~----~Aa~~V 720 (1172)
...|+|.+|+ .++++++|||..+..... +|.. +.+.. -..+ ..|. ..+.++|.++|+ ++.+.|
T Consensus 344 ~~~G~~~~i~g~~~~~~~p~v~~~~~~~~-~G~~-v~~~~-----~~~~---~~g~--v~~~g~~~~ea~~~~~~~~~~i 411 (425)
T 3vot_A 344 QGSGTFEKIDGLEEVKQRQEVKRVFQFMR-RGAK-ILPYP-----HFSG---YPGF--ILTSHHSYEECEAFYRELDDEL 411 (425)
T ss_dssp CSCEEEEEEETHHHHHTCTTEEEEEECCC-TTCE-ECCTT-----CCCC---CSEE--EEEEESSHHHHHHHHHHHHHHC
T ss_pred CCCeEEEecCCHHHHhcCCCeEEEEEEec-CCCE-eCCCC-----CCCC---eEEE--EEEEECCHHHHHHHHHHHhCcc
Confidence 3457888885 567889999988876532 2211 00000 0001 1121 246899998875 566778
Q ss_pred eeEEec
Q 001052 721 QVEYEE 726 (1172)
Q Consensus 721 ~V~ye~ 726 (1172)
+|.|+.
T Consensus 412 ~i~~~~ 417 (425)
T 3vot_A 412 HIIYQN 417 (425)
T ss_dssp EEEECC
T ss_pred EEEEeC
Confidence 899974
No 114
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=21.25 E-value=2e+02 Score=34.20 Aligned_cols=117 Identities=13% Similarity=0.154 Sum_probs=70.3
Q ss_pred EEEEecCCCCCCcHHHHHhhCCCCCcccCccCCCCCceEEEEeccccCCCcccceeecccccchhccC---CceEEEeec
Q 001052 28 LRKVLPDGLAHLTLLEYLRDIGLTGTKLGCGEGGCGACTVMVSRYDKKSKKCVHCAVNACLAPLYSLE---GMHVITVEG 104 (1172)
Q Consensus 28 ~~~~~~~~~p~~~L~~~LR~~~l~g~k~gC~~G~CGaCtV~~~~~~~~~~~~~~~~v~sCl~~~~~~~---g~~i~T~Eg 104 (1172)
+.++++ +++++|+||.|.... ...|.. +|.+.||| ++..+ .+++..+. |. .+|||=
T Consensus 43 ~~y~v~-~~~~~~vLd~L~~ik----~l~fr~----sCam~ING----------~~~la-~t~~~~~~~~~~~-~i~ieP 101 (514)
T 3kwl_A 43 ESYFLE-YQEDQYLLDLLKQLK----GVSYSE----NIALKINQ----------IAVFE-DAKVSDLVAFFSK-EWVLDP 101 (514)
T ss_dssp EEEEEE-CCTTCBHHHHHTTST----TCCCCS----SCCEEETT----------EEECS-CCBHHHHHHHHCS-EEEEEC
T ss_pred EEEEEe-CCCCCcHHHHHHHhh----hCeeec----cceEEECC----------Eehhh-hhhHHHHhhccCC-cEEEEE
Confidence 356675 789999999997754 455776 89999997 56666 34433221 33 567998
Q ss_pred ccCCC-------------CCcCHH----------HHHHHH---hCCCCC-----CCCchHHHHHHHHHHHhCCCCCCHHH
Q 001052 105 VGNRK-------------HGLHPI----------QESLVR---SHGSQC-----GFCTPGFIMSMYSLLRSSQTPPTEEQ 153 (1172)
Q Consensus 105 l~~~~-------------~~~~~i----------q~a~~~---~~~~qC-----G~CtpG~vm~~~~ll~~~~~~~~~~~ 153 (1172)
|.+-. +.|..| ++.-.+ .-.+-| .|=.|..++-+|-++...+.. .. |
T Consensus 102 l~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~~~~~~~~~~~~~C~~aCp~~~~~f~Gpa~l~~a~r~~~d~rd~-~~-~ 179 (514)
T 3kwl_A 102 LSKRYALKDLMIDEKAVLKNYEDFFKQVPYITKGEKEELEKFIQINFINPQTNPKYLGDGFFLYVKWLMKRYPTE-RD-R 179 (514)
T ss_dssp SCSTTEEETTEECHHHHHGGGHHHHHTCTTSCHHHHHGGGGTGGGGGTCCCCCTTCCCHHHHHHHHHHHHHCGGG-HH-H
T ss_pred CCCCcccccceeccHHHHHHHHHhhcCCCCCCHHHHHHHhhcChhhccCCCCCcccCcHHHHHHHHHHhcCCcch-HH-H
Confidence 86411 112233 221111 111223 388899999999988776544 33 6
Q ss_pred HHHHhh---cCccccCC
Q 001052 154 IEESLA---GNLCRCTG 167 (1172)
Q Consensus 154 i~~~l~---gnlCRCtg 167 (1172)
..+.+. ..+-+||.
T Consensus 180 rl~~l~~~~~gv~~C~~ 196 (514)
T 3kwl_A 180 LLEMISQPESGVMNFLS 196 (514)
T ss_dssp HHHHTCCTTTSGGGCCC
T ss_pred HHHHhhcCccccccccc
Confidence 667772 34556654
No 115
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=20.27 E-value=1.5e+02 Score=27.68 Aligned_cols=46 Identities=11% Similarity=0.177 Sum_probs=39.1
Q ss_pred eCCeEEEEeCCccCCCChHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Q 001052 1063 TDGTVLVTHGGVEMGQGLHTKVAQVAASAFNIPLSSVFVSETSTDK 1108 (1172)
Q Consensus 1063 ~DGsV~V~~g~~e~GQG~~T~~~QIaAe~Lgip~e~V~v~~~dT~~ 1108 (1172)
.++.+.|...+....--.+..+....|+.||+|..+|.|..+.|..
T Consensus 34 ~~~~LkV~v~ApP~dGkAN~ali~~LAk~l~V~ks~V~Iv~G~tSR 79 (108)
T 1n91_A 34 HGDEVKVAITAPPVDGQANSHLVKFLGKQFRVAKSQVVIEKGELGR 79 (108)
T ss_dssp CSSCEEEECCCCSSHHHHHHHHHHHHHHHTCCCTTTEEESSCTTSS
T ss_pred cCCEEEEEEecCCCCChHHHHHHHHHHHHhCCccceEEEEecCCCC
Confidence 4688999887777654588999999999999999999999887754
Done!