Your job contains 1 sequence.
>001056
MASLVSSAFTLKPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFTQTS
PEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRD
VDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKL
GSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILS
LQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEY
LNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGG
LDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALP
LVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLC
TRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVE
GLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPGNLNS
DGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAV
LHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISY
LTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELPDEGA
EISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIA
SLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDV
ADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQAL
EGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGG
KYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDV
VVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREAATRV
FSNASGSYSSNINLAVENSSWNDEKQLQTCI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001056
(1171 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173234 - symbol:GUN5 "GENOMES UNCOUPLED 5" sp... 5320 0. 1
UNIPROTKB|O53498 - symbol:cobN "Cobaltochelatase, CobN su... 454 1.8e-68 3
TIGR_CMR|SPO_2863 - symbol:SPO_2863 "cobN protein" specie... 426 3.1e-62 3
>TAIR|locus:2173234 [details] [associations]
symbol:GUN5 "GENOMES UNCOUPLED 5" species:3702
"Arabidopsis thaliana" [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=IEA]
[GO:0016851 "magnesium chelatase activity" evidence=IEA;ISS]
[GO:0009706 "chloroplast inner membrane" evidence=NAS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0010007 "magnesium chelatase
complex" evidence=TAS] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR003672 InterPro:IPR011771
InterPro:IPR022571 Pfam:PF02514 Pfam:PF11965 UniPathway:UPA00668
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0009570
EMBL:AB006704 GO:GO:0009706 GO:GO:0015979 GO:GO:0015995
GO:GO:0010007 GO:GO:0016851 EMBL:Z68495 EMBL:AY070133 EMBL:AY078971
EMBL:BT002311 IPI:IPI00548533 PIR:S71288 RefSeq:NP_196867.1
UniGene:At.23621 ProteinModelPortal:Q9FNB0 STRING:Q9FNB0
PRIDE:Q9FNB0 EnsemblPlants:AT5G13630.1 GeneID:831207
KEGG:ath:AT5G13630 TAIR:At5g13630 InParanoid:Q9FNB0 KO:K03403
OMA:VKEYLNW PhylomeDB:Q9FNB0 ProtClustDB:PLN03069
BioCyc:ARA:AT5G13630-MONOMER BioCyc:MetaCyc:AT5G13630-MONOMER
Genevestigator:Q9FNB0 TIGRFAMs:TIGR02025 Uniprot:Q9FNB0
Length = 1381
Score = 5320 (1877.8 bits), Expect = 0., P = 0.
Identities = 1024/1172 (87%), Positives = 1103/1172 (94%)
Query: 1 MASLVSSAFTL---KPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
MASLV S FTL K + LSS + HSFL +K +K KVK AV GNGLFT
Sbjct: 1 MASLVYSPFTLSTSKAEHLSSLTNSTK--HSFLRKKHRSTKPAKSFFKVKSAVSGNGLFT 58
Query: 58 QTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEE 117
QT+PEVRRIVP RDN+PTVKIVYVVLEAQYQS+LS AVQ+LN+ +ASYEVVGYLVEE
Sbjct: 59 QTNPEVRRIVPIKRDNVPTVKIVYVVLEAQYQSSLSEAVQSLNKTSRFASYEVVGYLVEE 118
Query: 118 LRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRL 177
LRD +TY FC+DL++ANIFIGSLIFVEELA+K+K AVEKERDR+DAVLVFPSMPEVMRL
Sbjct: 119 LRDKNTYNNFCEDLKDANIFIGSLIFVEELAIKVKDAVEKERDRMDAVLVFPSMPEVMRL 178
Query: 178 NKLGSFSMSQLGQSKSPFFQLFKKKKQG-AGFADSMLKLVRTLPKVLKYLPSDKAQDARL 236
NKLGSFSMSQLGQSKSPFFQLFK+KKQG AGFADSMLKLVRTLPKVLKYLPSDKAQDARL
Sbjct: 179 NKLGSFSMSQLGQSKSPFFQLFKRKKQGSAGFADSMLKLVRTLPKVLKYLPSDKAQDARL 238
Query: 237 YILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDD 296
YILSLQFWLGGSPDNLQNF+KMISGSYVPAL+G KIEY+DPVLFLDTGIWHPLAP MYDD
Sbjct: 239 YILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIEYSDPVLFLDTGIWHPLAPTMYDD 298
Query: 297 VKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPI 356
VKEY NWY TR+DTN+ LK DA V+GL+LQRSHIVTGDDSHYVAVIMELEARGAKV+PI
Sbjct: 299 VKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVTGDDSHYVAVIMELEARGAKVVPI 358
Query: 357 FAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYI 416
FAGGLDF+GPVE++FVDPV K+P+VNSA+SLTGFALVGGPARQDHPRAIEAL+KLDVPY+
Sbjct: 359 FAGGLDFSGPVEKYFVDPVSKQPIVNSAVSLTGFALVGGPARQDHPRAIEALKKLDVPYL 418
Query: 417 VALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRV 476
VA+PLVFQTTEEWLNSTLGLHPIQVALQVALPELDG +EPIVFAGRDPRTGK+HALHKRV
Sbjct: 419 VAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGAMEPIVFAGRDPRTGKSHALHKRV 478
Query: 477 EQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDG 536
EQLC RAIRWGELKRKTKAEKKLAITVFSFPPDKGN+GTAAYLNVF+SIFSVL+DL+RDG
Sbjct: 479 EQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGNVGTAAYLNVFASIFSVLRDLKRDG 538
Query: 537 YNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPG 596
YNVEGLPE +E LIEEIIHDKEAQFSSPNLN+AYKMGVREYQ LTPYA ALEENWGKPPG
Sbjct: 539 YNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKMGVREYQDLTPYANALEENWGKPPG 598
Query: 597 NLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFK 656
NLNSDGENLLVYGK YGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYS+VEKIFK
Sbjct: 599 NLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSYVEKIFK 658
Query: 657 ADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 716
ADAVLHFGTHGSLEFMPGKQVGMSD C+PDSLIGNIPNVYYYAANNPSEATIAKRRSYAN
Sbjct: 659 ADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 718
Query: 717 TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELP 776
TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV+LP
Sbjct: 719 TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLP 778
Query: 777 DEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPE 836
DEG E+S K+RD VVGKVYSKIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIAALDRPE
Sbjct: 779 DEGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPE 838
Query: 837 DEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQ 896
DEI++LPSILAE VGR+IED+YRGSDKGIL DVELL++IT+ASRGA+SAFVEKTTN KGQ
Sbjct: 839 DEISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKGQ 898
Query: 897 VVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSL 956
VVDV+DKL+S+LGFGINEPW++YLSNTKFYRA+R LRT+F F+GECLKLVV DNELGSL
Sbjct: 899 VVDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMDNELGSL 958
Query: 957 KQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKV 1016
QALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAM SAK+VV+RL+ERQK+
Sbjct: 959 MQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMASAKIVVERLVERQKL 1018
Query: 1017 DNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRP 1076
+N GKYPET+ALVLWGTDNIKTYGESL QVLWMIGVRP++DTFGRVNRVEPVSLEELGRP
Sbjct: 1019 ENEGKYPETIALVLWGTDNIKTYGESLGQVLWMIGVRPIADTFGRVNRVEPVSLEELGRP 1078
Query: 1077 RIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREA 1136
RIDVVVNCSGVFRDLFINQMNLLDRA+KMVAELDEP EQN+VRKHALEQA+ALGID+REA
Sbjct: 1079 RIDVVVNCSGVFRDLFINQMNLLDRAIKMVAELDEPVEQNFVRKHALEQAEALGIDIREA 1138
Query: 1137 ATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
ATRVFSNASGSYS+NI+LAVENSSWNDEKQLQ
Sbjct: 1139 ATRVFSNASGSYSANISLAVENSSWNDEKQLQ 1170
>UNIPROTKB|O53498 [details] [associations]
symbol:cobN "Cobaltochelatase, CobN subunit" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003672 InterPro:IPR011953 Pfam:PF02514 GO:GO:0005829
GO:GO:0005886 GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0009236
EMBL:CP003248 PIR:E70940 RefSeq:NP_216578.1 RefSeq:YP_006515474.1
ProteinModelPortal:O53498 PRIDE:O53498
EnsemblBacteria:EBMYCT00000001129 GeneID:13316865 GeneID:888252
KEGG:mtu:Rv2062c KEGG:mtv:RVBD_2062c PATRIC:18153146
TubercuList:Rv2062c HOGENOM:HOG000225033 KO:K02230 OMA:YQFQGGL
ProtClustDB:PRK05989 GO:GO:0051116 TIGRFAMs:TIGR02257
Uniprot:O53498
Length = 1194
Score = 454 (164.9 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 91/225 (40%), Positives = 140/225 (62%)
Query: 945 KLVVADNELGSLKQALEGKYVEPGPGGDPIRN-PKVLPTGKNIHALDPQAIPTTAAMQSA 1003
+L E+ + +AL+G+++ GP G P+R VLPTG+N +++DP+A+P+ A ++
Sbjct: 764 RLAGTATEIEQVLRALDGRFIPAGPSGSPLRGLVNVLPTGRNFYSVDPKAVPSRLAWEAG 823
Query: 1004 KVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPV-SDTFGRV 1062
+ D L+ R + D G++P +V L +WGT ++T G+ +A+VL ++GVRPV D RV
Sbjct: 824 VALADSLLARYR-DEHGRWPRSVGLSVWGTSAMRTAGDDIAEVLALLGVRPVWDDASRRV 882
Query: 1063 NRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHA 1122
+ P+ ELGRPRIDV V SG FRD F + + +LD AV++VA+LDE E NYVR HA
Sbjct: 883 IDLAPMQPAELGRPRIDVTVRISGFFRDAFPHVVTMLDDAVRLVADLDEAAEDNYVRAHA 942
Query: 1123 LEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQL 1167
G D R A TR+F + G+Y + + +++ SW D+ L
Sbjct: 943 QADLAHHG-DQRRATTRIFGSKPGTYGAGLLQLIDSRSWRDDADL 986
Score = 341 (125.1 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 89/289 (30%), Positives = 149/289 (51%)
Query: 548 ALIEEIIHDK----EAQFSSPNLNIAYKMGVREYQSLTP--YATALEENWGKPPGNL--- 598
ALIE HD E Q + + ++ K R++ + P + WG PPG L
Sbjct: 390 ALIECGGHDPDWLTEGQLAGNPIRVSAKE-YRDWFATLPAELTDVVTAYWGPPPGELFVD 448
Query: 599 ---NSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIF 655
+ DGE +++ + GN+ + VQP G+ +P+ + P H + A Y +++ F
Sbjct: 449 RSHDPDGE-IVIAALRAGNLVLMVQPPRGFGENPVAIYHDPDLPPSHHYLAAYRWLDTGF 507
Query: 656 K----ADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKR 711
A AV+H G HG+LE++PGK +GMS C PD+ +G++P +Y + N+P E T AKR
Sbjct: 508 SNGFGAHAVVHLGKHGNLEWLPGKTLGMSASCGPDAALGDLPLIYPFLVNDPGEGTQAKR 567
Query: 712 RSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLK--DTGRGPQIVSSIISTAKQCNL 769
R++A + +L PP A Y + +L +L+ + S+ D G+ P I I + + +
Sbjct: 568 RAHAVLVDHLIPPMARAETYGDIARLEQLLDEHASVAALDPGKLPAIRQQIWTLIRAAKM 627
Query: 770 DKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPS 818
D D+ L + E S + L V +I +++ R GLH++G+ P+
Sbjct: 628 DHDLGLTERPEEDSFDDMLLHVDGWLCEIKDVQIR---DGLHILGQNPT 673
Score = 230 (86.0 bits), Expect = 7.7e-57, Sum P(3) = 7.7e-57
Identities = 83/311 (26%), Positives = 145/311 (46%)
Query: 314 LKGPDA----PVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGP--V 367
L+ PDA P I ++ R+ + G+ + A+ +E G + +P++ L A P +
Sbjct: 143 LERPDAGKTGPTIAVLYYRAQHLAGNTGYVEALCRAIEDAGGRPLPLYCASLRTAEPRLL 202
Query: 368 ERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTE 427
ER M ++ + A GG D +E L LD+P + L L +
Sbjct: 203 ERLGGADAMVVTVLAAGGVKPAAASAGG---DDDSWNVEHLAALDIPILQGLCLT-SPRD 258
Query: 428 EWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRD-PRTGKAH--ALHKRVEQLCTRAI 484
+W + GL P+ VA QVA+PE DG + + F+ ++ G A +R ++ A+
Sbjct: 259 QWCANDDGLSPLDVASQVAVPEFDGRIITVPFSFKEIDDDGLISYVADPERCARVAGLAV 318
Query: 485 RWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLP- 543
R L++ A+K++A+ ++P IG A L+ +S ++L+ +++ GY V LP
Sbjct: 319 RHARLRQVAPADKRVALVFSAYPTKHARIGNAVGLDTPASAVALLQAMRQRGYRVGDLPG 378
Query: 544 -ETSE--ALIEEII----HDK----EAQFSSPNLNIAYKMGVREYQSLTP--YATALEEN 590
E+++ ALI +I HD E Q + + ++ K R++ + P +
Sbjct: 379 VESNDGDALIHALIECGGHDPDWLTEGQLAGNPIRVSAKE-YRDWFATLPAELTDVVTAY 437
Query: 591 WGKPPGNLNSD 601
WG PPG L D
Sbjct: 438 WGPPPGELFVD 448
Score = 43 (20.2 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 20/64 (31%), Positives = 30/64 (46%)
Query: 800 EIESRLLPCGLHVIGEPPSALEAVATLVNIAALDR-PEDEIASLPSILAETVGRDIEDIY 858
E ++R L L G PSA + + + AA+ R E+ +P LA T +IE +
Sbjct: 721 EAKARELVAALQATGWDPSAADRLTGNADAAAVLRFAATEV--IPR-LAGTA-TEIEQVL 776
Query: 859 RGSD 862
R D
Sbjct: 777 RALD 780
Score = 41 (19.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 245 LGGSPDNLQNFLKMISGSYVPA 266
L G+ ++ L+ + G ++PA
Sbjct: 765 LAGTATEIEQVLRALDGRFIPA 786
Score = 40 (19.1 bits), Expect = 5.0e-37, Sum P(3) = 5.0e-37
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 298 KEYLNWYGTRK-DTNEKLKGPDAPVIG-LILQRSHIVTGD 335
KEY +W+ T + + + P G L + RSH G+
Sbjct: 417 KEYRDWFATLPAELTDVVTAYWGPPPGELFVDRSHDPDGE 456
Score = 40 (19.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 971 GDPIRNPKVLPTGKNIHALDPQAIPTT-----AAMQSAKVVVDR-LIERQKVDN 1018
GD R ++L ++ ALDP +P +++AK+ D L ER + D+
Sbjct: 588 GDIARLEQLLDEHASVAALDPGKLPAIRQQIWTLIRAAKMDHDLGLTERPEEDS 641
Score = 38 (18.4 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 858 YRGSDKGILKDVELLRQITEAS 879
YR ++ L D+EL + EAS
Sbjct: 26 YRWANPSRLSDLELTDLLAEAS 47
>TIGR_CMR|SPO_2863 [details] [associations]
symbol:SPO_2863 "cobN protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009236 "cobalamin biosynthetic process" evidence=ISS]
InterPro:IPR003672 Pfam:PF02514 GO:GO:0009058 EMBL:CP000031
GenomeReviews:CP000031_GR HOGENOM:HOG000225033 KO:K02230
RefSeq:YP_168071.1 GeneID:3193474 KEGG:sil:SPO2863 PATRIC:23379151
OMA:LARTSAN ProtClustDB:PRK12321 Uniprot:Q5LPI5
Length = 1097
Score = 426 (155.0 bits), Expect = 3.1e-62, Sum P(3) = 3.1e-62
Identities = 136/512 (26%), Positives = 238/512 (46%)
Query: 318 DAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMK 377
+AP I + R+++ + D + A+I ARG + + +FA L P ++ M
Sbjct: 199 NAPRILVTFYRAYLTSADTASVAALIRAFRARGFQAMGMFAPSLK--APAAADWIAGQMP 256
Query: 378 KPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLH 437
+ ++ T F+ G A P ++A VP + + L + W + GL
Sbjct: 257 GLAPAAIVNATSFS--GKGANGASP--LDAA---GVP-VFQVALATSRRKAWAEAERGLS 308
Query: 438 PIQVALQVALPELDGGLEP--IVFA--G-RDPRTGKAHALHK----RVEQLCTRAIRWGE 488
P +A+ V LPE+DG ++ I F G RDP + H+ R+E + R W
Sbjct: 309 PADLAMHVVLPEVDGRIDAGLISFKEPGKRDPALEYSRFAHRPEPDRIEAVVNRVSGWLR 368
Query: 489 LKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEA 548
L K AE+ LA+ + ++P + A L+ +S ++L DLQ +GY++ + +
Sbjct: 369 LAAKPVAERVLALVLSTYPGKDWQMAHAVGLDALASAEAILCDLQDEGYDIA----SGQP 424
Query: 549 LIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATA-LEENWGKPPGNLNSDGENLLV 607
+ EE+ + S P Y+ + S++P L+ WG P + NL
Sbjct: 425 ITEEL---QTVSISWPITE--YRKALA---SISPQLHQDLQSAWGDPESDPAFSQGNLQF 476
Query: 608 YGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHG 667
+ G + +QP G S +P HG+ A+Y ++ + ADA++H G HG
Sbjct: 477 RAIRRGKALVALQPERGTPEARDDDYHDLSRTPRHGYVAFYLWLRQALGADALIHIGAHG 536
Query: 668 SLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPAEN 727
+LE++PGK V +S C+P+ LIG++P +Y + N+P EA AKRR A T+ ++ P
Sbjct: 537 TLEWLPGKAVALSGQCWPEVLIGDLPVIYPFIVNDPGEAAQAKRRIGAVTLGHIPPALRV 596
Query: 728 AGLYKGLKQLSELISSYQSLK--DTGRGPQIVSSIISTAKQCNLDKDVELPDEGAEISAK 785
+G + QL L+ + + D R ++ I + A+ L+ D+ L + A +A+
Sbjct: 597 SGTPDRMVQLEALLDEFSNADGLDPKRRDRLQGDIRAEAQALGLEDDLGL--DRATSTAE 654
Query: 786 ERDLVVGKVYSKIMEIESRLLPCGLHVIGEPP 817
+ ++ + +++ GLHV G P
Sbjct: 655 ----AITRIDRFVCDVKESQYGDGLHVYGRVP 682
Score = 306 (112.8 bits), Expect = 3.1e-62, Sum P(3) = 3.1e-62
Identities = 76/222 (34%), Positives = 116/222 (52%)
Query: 949 ADNELGSLKQALEGKYVEPGPGGDPIRNPK-VLPTGKNIHALDPQAIPTTAAMQSAKVVV 1007
A E +L AL GK + GP G P R VLPTG+N++ DP+++PT AA +
Sbjct: 694 AQGEARALLDALAGKRIAAGPSGSPYRGRSDVLPTGRNLYTTDPRSVPTRAAYAQGVKLA 753
Query: 1008 DRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFG-RVNRVE 1066
+ L+ R + G YP+ + + LWG+ ++T GE A L ++GV+PV D RV+ +E
Sbjct: 754 EELVRRH-LQEEGDYPKGLIVDLWGSATMRTAGEEFAMALHLLGVKPVWDQGSERVSGIE 812
Query: 1067 PVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQA 1126
+ + +L RPR+DV + SG+FRD+F L +AV+ ++ DE + N HA
Sbjct: 813 VLPITDLDRPRLDVTLRVSGLFRDVFPTLSALFGQAVRALSARDEAPDWNPYAGHA---- 868
Query: 1127 KALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
A RV+ A GSY + E ++ DE + Q
Sbjct: 869 ---------PAARVYGPAPGSYGLGMGHLPE--TYTDEARQQ 899
Score = 46 (21.3 bits), Expect = 3.1e-62, Sum P(3) = 3.1e-62
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 50 VVGNGLFTQTS---PEVRRIVPEN--RDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVN 104
V+G+ + + PE I PE N P + + + A SA +A+V AL +
Sbjct: 171 VIGSKILPECGFWCPERGVIAPETVFEGNAPRILVTFY--RAYLTSADTASVAALIRAFR 228
Query: 105 YASYEVVGYLVEELR 119
++ +G L+
Sbjct: 229 ARGFQAMGMFAPSLK 243
Score = 39 (18.8 bits), Expect = 1.7e-61, Sum P(3) = 1.7e-61
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 147 LALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKL 180
LAL + A +E RLDA P + + RL L
Sbjct: 112 LALAVLPADGREDTRLDAYSTLP-VSTLRRLQHL 144
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1171 1171 0.00094 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 626 (67 KB)
Total size of DFA: 480 KB (2225 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 102.65u 0.15s 102.80t Elapsed: 00:00:04
Total cpu time: 102.65u 0.15s 102.80t Elapsed: 00:00:04
Start: Fri May 10 02:24:56 2013 End: Fri May 10 02:25:00 2013