BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001056
(1171 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNB0|CHLH_ARATH Magnesium-chelatase subunit ChlH, chloroplastic OS=Arabidopsis
thaliana GN=CHLH PE=1 SV=1
Length = 1381
Score = 2136 bits (5535), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1024/1172 (87%), Positives = 1103/1172 (94%), Gaps = 6/1172 (0%)
Query: 1 MASLVSSAFTL---KPDQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
MASLV S FTL K + LSS + HSFL +K +K KVK AV GNGLFT
Sbjct: 1 MASLVYSPFTLSTSKAEHLSSLTNSTK--HSFLRKKHRSTKPAKSFFKVKSAVSGNGLFT 58
Query: 58 QTSPEVRRIVPENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEE 117
QT+PEVRRIVP RDN+PTVKIVYVVLEAQYQS+LS AVQ+LN+ +ASYEVVGYLVEE
Sbjct: 59 QTNPEVRRIVPIKRDNVPTVKIVYVVLEAQYQSSLSEAVQSLNKTSRFASYEVVGYLVEE 118
Query: 118 LRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRL 177
LRD +TY FC+DL++ANIFIGSLIFVEELA+K+K AVEKERDR+DAVLVFPSMPEVMRL
Sbjct: 119 LRDKNTYNNFCEDLKDANIFIGSLIFVEELAIKVKDAVEKERDRMDAVLVFPSMPEVMRL 178
Query: 178 NKLGSFSMSQLGQSKSPFFQLFKKKKQG-AGFADSMLKLVRTLPKVLKYLPSDKAQDARL 236
NKLGSFSMSQLGQSKSPFFQLFK+KKQG AGFADSMLKLVRTLPKVLKYLPSDKAQDARL
Sbjct: 179 NKLGSFSMSQLGQSKSPFFQLFKRKKQGSAGFADSMLKLVRTLPKVLKYLPSDKAQDARL 238
Query: 237 YILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDD 296
YILSLQFWLGGSPDNLQNF+KMISGSYVPAL+G KIEY+DPVLFLDTGIWHPLAP MYDD
Sbjct: 239 YILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIEYSDPVLFLDTGIWHPLAPTMYDD 298
Query: 297 VKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPI 356
VKEY NWY TR+DTN+ LK DA V+GL+LQRSHIVTGDDSHYVAVIMELEARGAKV+PI
Sbjct: 299 VKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVTGDDSHYVAVIMELEARGAKVVPI 358
Query: 357 FAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYI 416
FAGGLDF+GPVE++FVDPV K+P+VNSA+SLTGFALVGGPARQDHPRAIEAL+KLDVPY+
Sbjct: 359 FAGGLDFSGPVEKYFVDPVSKQPIVNSAVSLTGFALVGGPARQDHPRAIEALKKLDVPYL 418
Query: 417 VALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRV 476
VA+PLVFQTTEEWLNSTLGLHPIQVALQVALPELDG +EPIVFAGRDPRTGK+HALHKRV
Sbjct: 419 VAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGAMEPIVFAGRDPRTGKSHALHKRV 478
Query: 477 EQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDG 536
EQLC RAIRWGELKRKTKAEKKLAITVFSFPPDKGN+GTAAYLNVF+SIFSVL+DL+RDG
Sbjct: 479 EQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGNVGTAAYLNVFASIFSVLRDLKRDG 538
Query: 537 YNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKPPG 596
YNVEGLPE +E LIEEIIHDKEAQFSSPNLN+AYKMGVREYQ LTPYA ALEENWGKPPG
Sbjct: 539 YNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKMGVREYQDLTPYANALEENWGKPPG 598
Query: 597 NLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFK 656
NLNSDGENLLVYGK YGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYS+VEKIFK
Sbjct: 599 NLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSYVEKIFK 658
Query: 657 ADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 716
ADAVLHFGTHGSLEFMPGKQVGMSD C+PDSLIGNIPNVYYYAANNPSEATIAKRRSYAN
Sbjct: 659 ADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNIPNVYYYAANNPSEATIAKRRSYAN 718
Query: 717 TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVELP 776
TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV+LP
Sbjct: 719 TISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLP 778
Query: 777 DEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPE 836
DEG E+S K+RD VVGKVYSKIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIAALDRPE
Sbjct: 779 DEGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPE 838
Query: 837 DEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQ 896
DEI++LPSILAE VGR+IED+YRGSDKGIL DVELL++IT+ASRGA+SAFVEKTTN KGQ
Sbjct: 839 DEISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKGQ 898
Query: 897 VVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSL 956
VVDV+DKL+S+LGFGINEPW++YLSNTKFYRA+R LRT+F F+GECLKLVV DNELGSL
Sbjct: 899 VVDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMDNELGSL 958
Query: 957 KQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKV 1016
QALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAM SAK+VV+RL+ERQK+
Sbjct: 959 MQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMASAKIVVERLVERQKL 1018
Query: 1017 DNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRP 1076
+N GKYPET+ALVLWGTDNIKTYGESL QVLWMIGVRP++DTFGRVNRVEPVSLEELGRP
Sbjct: 1019 ENEGKYPETIALVLWGTDNIKTYGESLGQVLWMIGVRPIADTFGRVNRVEPVSLEELGRP 1078
Query: 1077 RIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGIDVREA 1136
RIDVVVNCSGVFRDLFINQMNLLDRA+KMVAELDEP EQN+VRKHALEQA+ALGID+REA
Sbjct: 1079 RIDVVVNCSGVFRDLFINQMNLLDRAIKMVAELDEPVEQNFVRKHALEQAEALGIDIREA 1138
Query: 1137 ATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
ATRVFSNASGSYS+NI+LAVENSSWNDEKQLQ
Sbjct: 1139 ATRVFSNASGSYSANISLAVENSSWNDEKQLQ 1170
>sp|B8ANF1|CHLH_ORYSI Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa
subsp. indica GN=CHLH PE=3 SV=1
Length = 1387
Score = 2037 bits (5277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 990/1176 (84%), Positives = 1079/1176 (91%), Gaps = 8/1176 (0%)
Query: 1 MASLVSSAFTLKP---DQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
M+SLVS+ FT +L + H FL S A ++CAV GNGLFT
Sbjct: 1 MSSLVSTPFTTATGVQKKLGAPVPLHSFLLSRRQPAAGAGRGRAAAAAIRCAVAGNGLFT 60
Query: 58 QTSPEVRRIVP----ENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYAS-YEVVG 112
QT PEVRR+VP +R +P VK+VYVVLEAQYQS+++AAV+ LN A+ +EVVG
Sbjct: 61 QTKPEVRRVVPPEGDASRRGVPRVKVVYVVLEAQYQSSVTAAVRELNADPRRAAGFEVVG 120
Query: 113 YLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMP 172
YLVEELRD +TYKTFC DL +AN+FIGSLIFVEELALK+K AVEKERDR+DAVLVFPSMP
Sbjct: 121 YLVEELRDEETYKTFCADLADANVFIGSLIFVEELALKVKDAVEKERDRMDAVLVFPSMP 180
Query: 173 EVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQ 232
EVMRLNKLGSFSMSQLGQSKSPFFQLFK+KK GFADSMLKLVRTLPKVLKYLPSDKAQ
Sbjct: 181 EVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKNSGGFADSMLKLVRTLPKVLKYLPSDKAQ 240
Query: 233 DARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPC 292
DARLYILSLQFWLGGSPDNLQNFLKMI+ SYVPAL+G I+Y DPVLFLD GIWHPLAP
Sbjct: 241 DARLYILSLQFWLGGSPDNLQNFLKMIAVSYVPALKGADIKYDDPVLFLDAGIWHPLAPT 300
Query: 293 MYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAK 352
MYDDVKEYLNWYGTR+DTN+KLK P+APVIGL+LQRSHIVTGDD HYVAVIMELEA+GAK
Sbjct: 301 MYDDVKEYLNWYGTRRDTNDKLKDPNAPVIGLVLQRSHIVTGDDGHYVAVIMELEAKGAK 360
Query: 353 VIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLD 412
VIPIFAGGLDF+GP +R+ VDP+ KP VN+ +SLTGFALVGGPARQDHP+AI AL+KLD
Sbjct: 361 VIPIFAGGLDFSGPTQRYLVDPITGKPFVNAVVSLTGFALVGGPARQDHPKAIAALQKLD 420
Query: 413 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHAL 472
VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGG+EPIVFAGRDPRTGK+HAL
Sbjct: 421 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSHAL 480
Query: 473 HKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDL 532
HKRVEQLCTRAIRW ELKRKTK EKKLAITVFSFPPDKGN+GTAAYLNVF+SI+SVL+DL
Sbjct: 481 HKRVEQLCTRAIRWAELKRKTKEEKKLAITVFSFPPDKGNVGTAAYLNVFNSIYSVLQDL 540
Query: 533 QRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWG 592
++DGYNVEGLP+T+EALIEE+IHDKEAQF+SPNLN+AY+M VREYQSLT YA+ LEENWG
Sbjct: 541 KKDGYNVEGLPDTAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWG 600
Query: 593 KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVE 652
KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYY+FVE
Sbjct: 601 KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYTFVE 660
Query: 653 KIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRR 712
KIF+ADAVLHFGTHGSLEFMPGKQVGMSD CYPDSLIGNIPN+YYYAANNPSEAT+AKRR
Sbjct: 661 KIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNIYYYAANNPSEATVAKRR 720
Query: 713 SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD 772
SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD
Sbjct: 721 SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD 780
Query: 773 VELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAAL 832
V LP+EG E+ ERDL+VGKVY+KIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIA+L
Sbjct: 781 VPLPEEGVELPPNERDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASL 840
Query: 833 DRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTN 892
DRPEDEI SLP+ILA+TVGR+IED+YRGSDKGIL DVELLRQITEASRGAI+AFVE+TTN
Sbjct: 841 DRPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITAFVERTTN 900
Query: 893 KKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNE 952
KGQVVDV +KLS++LGFG++EPW+Q+LS TKF RADR LRTLF F+GECLKL+VADNE
Sbjct: 901 NKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNE 960
Query: 953 LGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIE 1012
LGSLK ALEG YVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAA++SAK+VVDRL+E
Sbjct: 961 LGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAALKSAKIVVDRLLE 1020
Query: 1013 RQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEE 1072
RQKVDNGGKYPET+ALVLWGTDNIKTYGESLAQVLWMIGVRPV+DTFGRVNRVEPVSLEE
Sbjct: 1021 RQKVDNGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVEPVSLEE 1080
Query: 1073 LGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGID 1132
LGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEE NYVRKHA EQA+ LG+
Sbjct: 1081 LGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEMNYVRKHAQEQARELGVS 1140
Query: 1133 VREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
+REAATRVFSNASGSYSSN+NLAVEN+SW DEKQLQ
Sbjct: 1141 LREAATRVFSNASGSYSSNVNLAVENASWTDEKQLQ 1176
>sp|Q10M50|CHLH_ORYSJ Magnesium-chelatase subunit ChlH, chloroplastic OS=Oryza sativa
subsp. japonica GN=CHLH PE=1 SV=1
Length = 1387
Score = 2034 bits (5271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 987/1176 (83%), Positives = 1078/1176 (91%), Gaps = 8/1176 (0%)
Query: 1 MASLVSSAFTLKP---DQLSSHSQKHYFLHSFLPRKANYQIHSKYPLKVKCAVVGNGLFT 57
M+SLVS+ FT +L + H FL S A ++CAV GNGLFT
Sbjct: 1 MSSLVSTPFTTATGVQKKLGAPVPLHSFLLSRRQPAAGAGRGRAAAAAIRCAVAGNGLFT 60
Query: 58 QTSPEVRRIVP----ENRDNLPTVKIVYVVLEAQYQSALSAAVQALNQQVNYAS-YEVVG 112
QT PEVRR+VP +R +P VK+VYVVLEAQYQS+++AAV+ LN A+ +EVVG
Sbjct: 61 QTKPEVRRVVPPEGDASRRGVPRVKVVYVVLEAQYQSSVTAAVRELNADPRRAAGFEVVG 120
Query: 113 YLVEELRDVDTYKTFCKDLENANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMP 172
YLVEELRD +TYKTFC DL +AN+FIGSLIFVEELALK+K AVEKERDR+DAVLVFPSMP
Sbjct: 121 YLVEELRDEETYKTFCADLADANVFIGSLIFVEELALKVKDAVEKERDRMDAVLVFPSMP 180
Query: 173 EVMRLNKLGSFSMSQLGQSKSPFFQLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQ 232
EVMRLNKLGSFSMSQLGQSKSPFFQLFK+KK GFADSMLKLVRTLPKVLKYLPSDKAQ
Sbjct: 181 EVMRLNKLGSFSMSQLGQSKSPFFQLFKRKKNSGGFADSMLKLVRTLPKVLKYLPSDKAQ 240
Query: 233 DARLYILSLQFWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPC 292
DARLYILSLQFWLGGSPDNLQNFLKMI+ SYVPAL+G I+Y DPVLFLD GIWHPLAP
Sbjct: 241 DARLYILSLQFWLGGSPDNLQNFLKMIAVSYVPALKGADIKYDDPVLFLDAGIWHPLAPT 300
Query: 293 MYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAK 352
MYDDVKEYLNWYGTR+DTN+KLK P+APVIGL+LQRSHIVTGDD HYVAVIMELEA+GAK
Sbjct: 301 MYDDVKEYLNWYGTRRDTNDKLKDPNAPVIGLVLQRSHIVTGDDGHYVAVIMELEAKGAK 360
Query: 353 VIPIFAGGLDFAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLD 412
VIPIFAGGLDF+GP +R+ VDP+ KP VN+ +SLTGFALVGGPARQDHP+AI AL+KLD
Sbjct: 361 VIPIFAGGLDFSGPTQRYLVDPITGKPFVNAVVSLTGFALVGGPARQDHPKAIAALQKLD 420
Query: 413 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHAL 472
VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGG+EPIVFAGRDPRTGK+HAL
Sbjct: 421 VPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSHAL 480
Query: 473 HKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDL 532
HKRVEQLCTRAIRW ELKRKTK EKKLAITVFSFPPDKGN+GTAAYLNVF+SI+SVL+DL
Sbjct: 481 HKRVEQLCTRAIRWAELKRKTKEEKKLAITVFSFPPDKGNVGTAAYLNVFNSIYSVLQDL 540
Query: 533 QRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWG 592
++DGYNVEGLP+T+EALIEE+IHDKEAQF+SPNLN+AY+M VREYQSLT YA+ LEENWG
Sbjct: 541 KKDGYNVEGLPDTAEALIEEVIHDKEAQFNSPNLNVAYRMNVREYQSLTSYASLLEENWG 600
Query: 593 KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVE 652
KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYY+FVE
Sbjct: 601 KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYTFVE 660
Query: 653 KIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRR 712
KIF+ADAVLHFGTHGSLEFMPGKQVGMSD CYPDSLIGNIPN+YYYAANNPSEAT+AKRR
Sbjct: 661 KIFQADAVLHFGTHGSLEFMPGKQVGMSDACYPDSLIGNIPNIYYYAANNPSEATVAKRR 720
Query: 713 SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD 772
SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD
Sbjct: 721 SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKD 780
Query: 773 VELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAAL 832
V LP+EG E+ ERDL+VGKVY+KIMEIESRLLPCGLHVIGEPPSA+EAVATLVNIA+L
Sbjct: 781 VPLPEEGVELPPNERDLIVGKVYAKIMEIESRLLPCGLHVIGEPPSAIEAVATLVNIASL 840
Query: 833 DRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTN 892
DRPEDEI SLP+ILA+TVGR+IED+YRGSDKGIL DVELLRQITEASRGAI+ FVE+TTN
Sbjct: 841 DRPEDEIYSLPNILAQTVGRNIEDVYRGSDKGILADVELLRQITEASRGAITTFVERTTN 900
Query: 893 KKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNE 952
KGQVVDV +KLS++LGFG++EPW+Q+LS TKF RADR LRTLF F+GECLKL+VADNE
Sbjct: 901 NKGQVVDVTNKLSTMLGFGLSEPWVQHLSKTKFIRADREKLRTLFTFLGECLKLIVADNE 960
Query: 953 LGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIE 1012
LGSLK ALEG YVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAA++SAK++VDRL+E
Sbjct: 961 LGSLKLALEGSYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAALKSAKIIVDRLLE 1020
Query: 1013 RQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEE 1072
RQKVDNGGKYPET+ALVLWGTDNIKTYGESLAQVLWMIGVRPV+DTFGRVNRVEPVSLEE
Sbjct: 1021 RQKVDNGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVEPVSLEE 1080
Query: 1073 LGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKALGID 1132
LGRPRIDVV+NCSGVFRDLFINQMNLLDRAVKMVAELDEPEE NYVRKHA EQA+ LG+
Sbjct: 1081 LGRPRIDVVINCSGVFRDLFINQMNLLDRAVKMVAELDEPEEMNYVRKHAQEQARELGVS 1140
Query: 1133 VREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
+REAATRVFSNASGSYSSN+NLAVEN+SW DEKQLQ
Sbjct: 1141 LREAATRVFSNASGSYSSNVNLAVENASWTDEKQLQ 1176
>sp|O50314|BCHH_CHLP8 Magnesium-chelatase subunit H OS=Chlorobaculum parvum (strain NCIB
8327) GN=bchH PE=3 SV=2
Length = 1272
Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust.
Identities = 367/1124 (32%), Positives = 603/1124 (53%), Gaps = 104/1124 (9%)
Query: 78 KIVYVVLEAQYQSALSAAVQALNQQVNYASYEVVGYLVEELRDVDTYKT---FCKDLENA 134
KI +V QY + L ++++ + E+V +L DVD K + A
Sbjct: 6 KITAIVGLEQYNAGLWRKIKSMLDK----DAELV-----QLSDVDLEKQNPEAATAIREA 56
Query: 135 NIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSP 194
+ S+I +E K +++ + + +F SMPE M L K+GS+ +++ G+S P
Sbjct: 57 DCVFMSMINFKEQIDWFKEQLDQAINE-KTIFIFESMPEAMALTKVGSYQVTE-GKSGMP 114
Query: 195 FF------QLFKKKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGS 248
L K + + A + +KL++ + +L +P +KA+D + +++ +WL +
Sbjct: 115 DMVKKIAKMLVKGRDEDALYG--YMKLMKIMRTILPLVP-NKAKDFKNWLMVYSYWLQPT 171
Query: 249 PDNLQNFLKMISGSYVPALRGQKIEYADPVLFL-DTGIWHPLAPCMYDDVKEYLNWYGTR 307
P+N+ N ++I Y + K+E P++ + + G++HP A + DVK + +W R
Sbjct: 172 PENIVNMFRLILREYFDS--NVKVE---PIVDVPNMGLYHPDAKEYFKDVKSFKSWSKKR 226
Query: 308 KDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPV 367
+K + + L+ R H++ + ++ I LE G V P F G++ G V
Sbjct: 227 GVNFDK-----SQKMALLFFRKHLLQ-EKTYIDNTIRTLEKHGVNVFPAFVMGVE--GHV 278
Query: 368 ERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAI-----EALRKLDVPYIVALPLV 422
V + K ++ +++ GF LVGGPA P E L LDVPY+VA PL+
Sbjct: 279 ---LVRDWLMKEKIDLLVNMMGFGLVGGPAGSTKPGTAADARHEILTGLDVPYMVAQPLL 335
Query: 423 FQTTEEWLNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTR 482
Q E W LG+ P+QV ++PE+DG P++ + GK + +R+++L
Sbjct: 336 VQDFESW--HELGVSPMQVTFTYSIPEMDGATAPVILGAL--QDGKVETVQERLDRLAIL 391
Query: 483 AIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGL 542
+ +W L+ + +K++A+ V+ +PP G TAA L+V +++ +L+ L+++GYNV L
Sbjct: 392 SKKWMRLRATSNRDKRVALVVYDYPPGLGKKATAALLDVPTTLLRILERLKKEGYNVGTL 451
Query: 543 PETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATA--LEENWGKPPGNLNS 600
PE+ L E + + Q N A K+ +Y L Y +EE W PG +
Sbjct: 452 PESPTKLFEMLDRATDYQIMQ-NKPEAIKVSREKYNELATYHERERIEERWQAFPGEIAP 510
Query: 601 DG-ENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADA 659
G E + + G + GN++IGVQP G +GDPMRL+F K+ +PHH + ++Y ++ + F A A
Sbjct: 511 VGSEEVFLGGLRLGNIYIGVQPRLGVQGDPMRLIFDKANTPHHQYISFYRWISREFDAHA 570
Query: 660 VLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTIS 719
++H G HGS+E+MPG Q G++ C+PD+L+G +P+ Y Y NNPSE+TIAKRR A +S
Sbjct: 571 LVHVGMHGSVEWMPGLQTGLTGECWPDALLGEVPHFYIYPVNNPSESTIAKRRGLATMVS 630
Query: 720 YLTPPAENAGLYKGLKQLSELISSYQSLKDTGRG---PQIVSSIISTAKQCNLDKDV-EL 775
++ PP AGLYK L L +L++ Y+ ++ +G Q+ +I++ A+ NL D
Sbjct: 631 HVVPPLARAGLYKELPALKDLLADYRE-RNQAQGEDVEQVQEAIMTKAELLNLTDDCPRR 689
Query: 776 PDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRP 835
PDE V ++Y I+E+E+RL+ LHV GE LE+ + +R
Sbjct: 690 PDEPFSD-------FVSRLYIYIVELENRLISNSLHVFGE-AGPLESQIITITETIKNRG 741
Query: 836 EDEIASLPSILAETVGRD-----IEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKT 890
E+ SLP I +T GR+ E+I S KG E Q+ E + A FV++T
Sbjct: 742 ENG-RSLPYIFIDTSGRNGHYGSYEEISSLSRKGD----EAAIQLREWAENACREFVKQT 796
Query: 891 TNKKGQVVDVADKLSSILGFGI----NEPWIQYLSNTKFYRADRATLRTLFEFVGECLKL 946
+ + V S+ G G ++P+IQ R + E G +
Sbjct: 797 MFDRKNPMQV---FESVTGGGRMPEEDKPFIQ---------------RIIQE--GAMMIQ 836
Query: 947 VVADN--ELGSLKQALEGKYVEPGPGGDPIRNP-KVLPTGKNIHALDPQAIPTTAAMQSA 1003
++DN E+ SL + L+G Y+ GPGGD +R+ VLP+G+NIH++DP IP+ A +
Sbjct: 837 ALSDNSSEMNSLVKVLDGGYIPSGPGGDLVRDGMNVLPSGRNIHSIDPWRIPSETAFKRG 896
Query: 1004 KVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVN 1063
++ D LI + +N G+YPET+A V+WG D IKT GE++A V+ ++G P D FG+++
Sbjct: 897 TLIADGLISKHVAENDGQYPETIAEVIWGLDTIKTKGEAVAVVIRLMGAEPAYDAFGKIS 956
Query: 1064 RVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHAL 1123
L++LGRPR+DV++ S +FRD F M+ LDR VK A+ DEP E N+++KH +
Sbjct: 957 HYNLTPLDKLGRPRVDVLMQLSPIFRDAFGILMDQLDRLVKDAAKADEPHEMNFIKKH-V 1015
Query: 1124 EQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQL 1167
++A A G+D A +R F+ A G+Y + ++ +E+S+W +E L
Sbjct: 1016 DEALAEGMDFEAATSRQFTQAPGAYGTYVDDMIEDSAWENEGDL 1059
>sp|Q9RFD5|BCHH_RHOS4 Magnesium-chelatase subunit H OS=Rhodobacter sphaeroides (strain
ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=bchH PE=3
SV=1
Length = 1193
Score = 522 bits (1345), Expect = e-147, Method: Compositional matrix adjust.
Identities = 279/705 (39%), Positives = 419/705 (59%), Gaps = 57/705 (8%)
Query: 134 ANIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKS 193
A+I I +L+F+EE + ++ R+R+DA + + P +++L K+G M +
Sbjct: 70 ADIVIANLLFIEEHINAVLPELQAARERVDAFVGMIADPSIVKLTKMGDLDMQKPASGPM 129
Query: 194 PFFQLFK--KKKQGAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDN 251
+ + K+QG +S ++++RT+PK+LK++P KAQD R + LS+Q+WLGGS DN
Sbjct: 130 ALLKKLRGASKEQG-NSGESQMRMLRTIPKMLKFVPG-KAQDLRAWFLSMQYWLGGSDDN 187
Query: 252 LQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTN 311
L+ ++ + Y +I P+ + + G++HP P D + D N
Sbjct: 188 LEQMVRYLVSRYSANRAWHRIHAKAPIEYPEVGLYHPSLP---DRIT---------TDPN 235
Query: 312 EKLKGPDAPV-IGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERF 370
+ + A V +GL++ RS+I+ D +HY AVI E +G V+P FAGGLD ++ +
Sbjct: 236 DLPRPAGAKVTVGLLMLRSYILASDTAHYDAVIEAFERKGIAVLPAFAGGLDGRPAIDAY 295
Query: 371 FVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWL 430
F D + +++ +SLTGF+LVGGPA D AIEAL+ LDVPYI A PL FQT +W
Sbjct: 296 FHDKL--GTTIDAMVSLTGFSLVGGPAYNDSHAAIEALKGLDVPYIAAHPLEFQTLGQWA 353
Query: 431 NSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTG--------KAHA----------L 472
+ GL P++ + VALPE+DG P VFAGR +G KA A
Sbjct: 354 QAGGGLGPVETTMLVALPEIDGATNPTVFAGRHDLSGCTGCPGGCKATAQAAECRAMSPC 413
Query: 473 HKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDL 532
H+R++ L + +R L+R AE+++ + ++ FPP+ G +GTAAYL VF S+F+VL +
Sbjct: 414 HERIQTLAEKTLRLALLRRSKIAERRVGVVLYGFPPNAGAVGTAAYLAVFESLFNVLNAM 473
Query: 533 QRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWG 592
+R+GY +E +PE+ +AL + ++ +Q+ P NIA + + S TP+ +E+ WG
Sbjct: 474 KREGYQLE-VPESVQALRDAVLGGTASQYGQPA-NIAAHVSAEKIVSGTPWLADIEKAWG 531
Query: 593 KPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVE 652
PG + SDG + + G+Q+GNVF+GVQP FGYEGDPMRLLF K +P H F+ +Y ++
Sbjct: 532 AAPGRIQSDGRGVYILGQQFGNVFVGVQPVFGYEGDPMRLLFEKGFAPTHAFSVFYRWLR 591
Query: 653 KIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRR 712
+ F AD +LHFG HG+LEFMPGKQ GMS C+PD LIG +PNVY YAANNPSEA++AKRR
Sbjct: 592 EDFGADVLLHFGMHGALEFMPGKQAGMSGACWPDRLIGALPNVYLYAANNPSEASLAKRR 651
Query: 713 SYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIIS-TAKQCNLDK 771
S A T+++LTPP AGLY+GL+ L + ++ Y+ L + +S +I A+ NLD
Sbjct: 652 SNAITVTHLTPPLAKAGLYRGLQDLKDSLTRYRQLAPDAPEREELSLLIGEQARAVNLDM 711
Query: 772 DVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEP 816
+ V ++ K++E E L+ GLHV+G P
Sbjct: 712 -----------------VDVDTMWLKLLETEGSLITDGLHVVGRP 739
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 146/227 (64%), Gaps = 6/227 (2%)
Query: 942 ECLKLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQ 1001
E ++ + E+ L +AL G Y+EP PGGD IR P++LPTG+NIHA DP +PT A+Q
Sbjct: 762 EVEGMLRQETEIAGLLRALGGHYMEPVPGGDLIRAPEILPTGRNIHAFDPFRMPTAYAIQ 821
Query: 1002 SAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGR 1061
RL+ D K PETVALVLWG+DNIK+ G +AQ L ++G RP D +GR
Sbjct: 822 DGAAQAQRLL-----DAHPKLPETVALVLWGSDNIKSDGGPIAQALALMGARPRFDHYGR 876
Query: 1062 VNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELD-EPEEQNYVRK 1120
+ + + L ELGRPRIDV++ SG+FRDL Q +L A A + EP QN++R
Sbjct: 877 LAGADLIPLSELGRPRIDVIMTLSGIFRDLLPLQTRMLAEAAWKAANAEGEPLAQNFIRA 936
Query: 1121 HALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQL 1167
HAL A+ +G+D+ A+ RVFSNA G+Y SN+N+ V +S++ +E +L
Sbjct: 937 HALSYAQEMGVDMETASLRVFSNAEGAYGSNVNVLVGSSAFGEEDEL 983
>sp|P26162|BCHH_RHOCB Magnesium-chelatase subunit H OS=Rhodobacter capsulatus (strain
ATCC BAA-309 / NBRC 16581 / SB1003) GN=bchH PE=3 SV=2
Length = 1189
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 280/716 (39%), Positives = 418/716 (58%), Gaps = 60/716 (8%)
Query: 135 NIFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSP 194
NI + +L+F++E I + RD LDA + + P+++RL K+G M++
Sbjct: 72 NIVVANLLFIDEHLQAILPEMTAVRDNLDAFVGMVADPQIVRLTKMGDLDMTKPASGPMA 131
Query: 195 FFQLFKKKKQ-GAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQ 253
+ + K + GAG A+ + ++RT+PK+LK++P KAQD R + L +Q+WLGGS DN++
Sbjct: 132 LLKKLRGKSEPGAGSAEKQMSMLRTIPKMLKFIPG-KAQDLRAWFLCMQYWLGGSEDNIE 190
Query: 254 NFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEK 313
+ ++ + G Y + I+ A P+ + + G++HP P G K
Sbjct: 191 SMVRYLVGRYADNRDWRGIKAAAPIDYPEVGLYHPDMP-------------GRITTDPAK 237
Query: 314 LKGPDAPV--IGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFF 371
L P PV IG+++ RS+I+ D +HY AVI EL+A G V+P FAGGLD +E F
Sbjct: 238 LPQPANPVATIGILMLRSYILAKDTAHYDAVIRELQAHGVAVLPAFAGGLDGRPAIEEFL 297
Query: 372 VDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLN 431
+++ +SL+GF+LVGGPA D A+E L+ LDVPY+ A PL FQT +W
Sbjct: 298 ------HGKIDTLLSLSGFSLVGGPAYNDSDAAVETLKALDVPYVTAQPLEFQTLGQWRA 351
Query: 432 STLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTG--------------KAHALH---K 474
S GL P++ + +ALPE+DG P VFAGR G ++HA+ +
Sbjct: 352 SGGGLGPVETTMLIALPEIDGATNPTVFAGRHDPAGCLTCARGCKPDPEAESHAMAPCPE 411
Query: 475 RVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQR 534
R+E L + +R +L+R AE+K+ I ++ FPP+ G GTAAYL+VF S+F+V+ ++
Sbjct: 412 RIETLVDKVVRMAKLRRSKVAERKVGIVLYGFPPNAGAAGTAAYLSVFESLFNVMHAMKA 471
Query: 535 DGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEENWGKP 594
GY + LPE+ + L + ++ P IA ++ E+ + T + +E WG
Sbjct: 472 SGYQMGELPESVQELRDAVLCGPNTTHGQPA-QIAARIPAAEFVARTKWLKDIEAAWGST 530
Query: 595 PGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKI 654
PG +DG ++ V G+Q+GNVF+G+QP FGYEGDPMRLLF K +P H FAA+Y ++ +
Sbjct: 531 PGKHQTDGRDVFVLGRQFGNVFVGLQPVFGYEGDPMRLLFEKGFAPTHAFAAFYRWLRED 590
Query: 655 FKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSY 714
F AD +LHFG HG+LEFMPGKQ GM + C+PD LIGN+PNVY YAANNPSEAT+AKRRS
Sbjct: 591 FAADTLLHFGMHGALEFMPGKQAGMCESCWPDRLIGNLPNVYLYAANNPSEATLAKRRSN 650
Query: 715 ANTISYLTPPAENAGLYKGLKQLSELISSYQSL-KDTGRGPQIVSSIISTAKQCNLDKDV 773
A +S+LTPP +GLYKGL ++ E + ++L D+ + + + AK N+D
Sbjct: 651 AVIVSHLTPPLAQSGLYKGLAEIKESLGRLRALPPDSPEREDLEALVREQAKGVNMDAS- 709
Query: 774 ELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNI 829
DL ++ K++E E L+ GLHV+G P +A EA A ++ +
Sbjct: 710 --------------DL--STLWEKLLETEGALITEGLHVVGRPMTA-EARAEMLAL 748
Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 139/224 (62%), Gaps = 6/224 (2%)
Query: 945 KLVVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAK 1004
KL+ ++E+ L AL+G+YV P PGGD +R+P++LPTG+NIHA DP +PT A++
Sbjct: 760 KLLQEEHEIAGLLHALDGRYVPPVPGGDLVRSPEILPTGRNIHAFDPFRMPTAFAIKDGA 819
Query: 1005 VVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNR 1064
RL+ P ++ALVLWG+DNIK+ G + Q L ++G RP D +GR+
Sbjct: 820 AQAARLLATHPT-----LPRSIALVLWGSDNIKSDGGPIGQALALMGARPRFDNYGRLAG 874
Query: 1065 VEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELD-EPEEQNYVRKHAL 1123
E + L ELGRPRIDVV+ SG+FRDL Q LL A + A + EP QN++R + L
Sbjct: 875 AELIPLSELGRPRIDVVMTLSGIFRDLLPLQTKLLAEAAYLCASAENEPLAQNFIRANVL 934
Query: 1124 EQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQL 1167
+ G+D A+ RVFSNA G+Y SN+N V ++ + DE +L
Sbjct: 935 ATMQDTGMDFETASLRVFSNAEGAYGSNVNTLVGSAGFGDEDEL 978
>sp|Q58318|Y908_METJA Uncharacterized protein MJ0908 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0908 PE=3 SV=1
Length = 1232
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 283/926 (30%), Positives = 484/926 (52%), Gaps = 87/926 (9%)
Query: 272 IEYADPVLFLDTGIWHPLAPCMYDDVKEYLNWYGTRKDTNEKLKGPDAPVIGLILQRSHI 331
+EY +P GI++ ++ + +YLN+ E + D P+IG++ R+
Sbjct: 143 VEYEEPRPMPWQGIYY--KGKYFETLDDYLNY------LKELGRDLDKPIIGVLFYRNWF 194
Query: 332 VTGDDSHYVAVIMELEARGAKVIPIFA-------GGLDFAGPVERFFVDPVMKKPMVNSA 384
V + + +I +E +GA I +F+ G + +RFF KP+V++
Sbjct: 195 VANNIDYVNDLIDIIENKGAIPIAVFSSHLKNELGSIGTLETFKRFFYKD--GKPIVHAL 252
Query: 385 ISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQ 444
I+ T F L G + E L++L+VP + + + E+W S GL+PI + +
Sbjct: 253 INTTMFTLSMGVKAELLKDEPEFLKELNVPILQGI-ISTGFIEDWKKSVSGLNPIDLIIG 311
Query: 445 VALPELDGGLEPIVFAGR----DPRTG----KAHALHKRVEQLCTRAIRWGELKRKTKAE 496
+A+PE DG + G+ D G K A+ R E++ A+R+ LK K+ +
Sbjct: 312 MAMPEFDGAIIHFPIGGKEKIKDGEVGVPIIKYRAIRDRAEKIVDLALRYANLKLKSNKD 371
Query: 497 KKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIH- 555
KK+AI ++PP I +A L+ S+ ++LK++++ G+ V+ +P+ LI+++++
Sbjct: 372 KKIAIIFHNYPPRNDKIASAFGLDSPESVVNILKEMKKRGFIVDEIPKNGTELIKKMLNY 431
Query: 556 -DKEAQFSSPNLNIAYKMGVREYQSLTPYATALEE--------NWGKPPGN-LNSDGENL 605
+ +F + + I +G + + + +L E NWG PG+ +N DGE L
Sbjct: 432 ATNDKRFLTEEM-IKKAVGKVKKEDYEKWFNSLSEKVKQELIKNWGAIPGDVMNFDGE-L 489
Query: 606 LVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAVLHFGT 665
++ G GNVFI VQP G+ +P + S P H + A+Y +++ +FKADA++H G
Sbjct: 490 IIPGIINGNVFISVQPPRGFGENPSAIYHSPDLPPTHYYIAFYKWIKDVFKADAIMHIGK 549
Query: 666 HGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISYLTPPA 725
HG+LE++PGK VG+S+ CYPD + +PN+Y + NNP E T AKRRSYA IS+L PP
Sbjct: 550 HGNLEWLPGKCVGLSNECYPD-ICMELPNIYPFIVNNPGEGTQAKRRSYATIISHLIPPM 608
Query: 726 ENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDV---ELPDEGAEI 782
+ LY L +L + I Y ++ + + I+ K+ LD+D+ ++ DE EI
Sbjct: 609 TISDLYGDLVELEKSIDDYYETENKEKKEFLKKEILKKIKELKLDEDLLDGKVIDE--EI 666
Query: 783 SAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDEIASL 842
+ + + ++ K++ + +++R + GLH++G P + V L I +
Sbjct: 667 NDENFEKLLNKIHDYLETLKNRQINDGLHIMGVPLEGDKLVNMLFMIIRYQ------FNY 720
Query: 843 PSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQVVDVAD 902
ILAE + E++ +KG K ++L +I E + +++
Sbjct: 721 LEILAEILDYSWEEL--NENKG--KYHKILDEINEIGLNLLKEYMQ-------------- 762
Query: 903 KLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSLKQALEG 962
+ +E I L K R L+T+ +K+ D E+ + ALEG
Sbjct: 763 -------YNFDENKIDELKTVKINSKLRDVLKTVSTIYKNLMKV---DEEIINAVNALEG 812
Query: 963 KYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGGKY 1022
Y+ P G P ++ LPTG+N ++ +PQ IPT +A + K + + LI + + GKY
Sbjct: 813 FYIPPRVAGAPTKDINCLPTGRNFYSCNPQEIPTKSAYEMGKKLAEDLINKY-LKEEGKY 871
Query: 1023 PETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFGRVNRVEPVSLEELGRPRIDVVV 1082
PE + +++WG+ ++T G+ + ++L+++GV+PV + GRV +E + LEELGRPRIDV +
Sbjct: 872 PEYIGVIVWGSPTMRTKGDDIGEILYLLGVKPVWNKMGRVVGLEVIPLEELGRPRIDVTL 931
Query: 1083 NCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAK---ALGIDVREAAT- 1138
SG+FRD F N + L+D A+KMVA LDEP+E NYV+KH E+ + GID + A
Sbjct: 932 RISGLFRDTFPNVVELIDEAIKMVANLDEPDEMNYVKKHYREEVEEKIKKGIDEKTAKET 991
Query: 1139 ---RVFSNASGSYSSNINLAVENSSW 1161
R+FS+ G Y + ++ ++ +W
Sbjct: 992 SLYRIFSDKPGCYGAGVSHLIDEKNW 1017
>sp|Q58836|Y1441_METJA Uncharacterized protein MJ1441 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1441 PE=3 SV=1
Length = 1226
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 272/894 (30%), Positives = 447/894 (50%), Gaps = 102/894 (11%)
Query: 321 VIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGG--------LDFAGPVERFFV 372
+G++ R H + DD + ++ + VIP+F+ G L V ++F+
Sbjct: 152 TVGILFSR-HYLVNDDMDVIEKLLNRLDKEFNVIPVFSYGAKCEDLNALGSGESVLKYFL 210
Query: 373 DPVMKKPMVNSAISLTGFAL--VGGPARQDHPRAIEALRKLDVPYIVALPLVFQTTEEWL 430
KP++++ I+L F L V A + +E L+KLDVP + +++ E+W
Sbjct: 211 KD--DKPIIDALINLLSFPLGTVKDKANLNKISGVEILKKLDVPVFHPIMSYYKSYEDWK 268
Query: 431 NSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTG--KAHALHKRVEQLCTRAIRWGE 488
GL + +ALPE +G +EPI+ + G K + +R++++ R RW E
Sbjct: 269 KDEQGLSA-DIGWTIALPEFEGVIEPIIIGTTENENGLEKKFGIEERIDKVVRRIKRWIE 327
Query: 489 LKRKTKAEKKLAITVF--SFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETS 546
LK K K ++K+ + + + +G+AA+L+ F S+ +++K L+ +GY VE +PE
Sbjct: 328 LKYKPKKDRKVIFILHNNACASVEATVGSAAHLDSFQSVINIMKKLKEEGYYVENIPENG 387
Query: 547 EALIEEIIHDK---EAQFSSPNLNIA-----YKMGVREYQSLTPYATALEEN-------- 590
E L + I+ K E ++++ N IA Y M EY Y L EN
Sbjct: 388 EELAQLIMQKKAISEFRWTTVNEIIAKGGYLYLMDEEEYYE---YFNTLPENVKNKILET 444
Query: 591 WGK------PPGNL-NSDGEN-LLVYGKQYGNVFIGVQPTFGY-----EGDPMRLLFSKS 637
WG P G + +G+N +++ G ++GNV++ VQP G +G ++L
Sbjct: 445 WGDLNGKDIPAGMIYKVNGKNKIVITGLKFGNVYVCVQPKRGCAGARCDGRVCKILHDPY 504
Query: 638 ASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYY 697
P H + A Y + I AD ++H GTHG+LEF+PGK VG+S+ CYPD IG+IP++Y
Sbjct: 505 CPPTHQYIASYKYFNDI--ADIIIHVGTHGTLEFLPGKNVGLSNECYPDICIGDIPHLYI 562
Query: 698 YAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIV 757
Y ++NP E TIAKRRSYA I ++ +A Y+ L+ L I Y D R Q+
Sbjct: 563 YNSDNPPEGTIAKRRSYATIIDHMQTVMVDA-FYEELETLDSYIEEYLKEMDASRRHQLE 621
Query: 758 SSIISTAKQCNLDKDVELPDEGAEISAKERDL--VVGKVYSKIMEIESRLLPCGLHVIGE 815
I+ K+ NL K E ++ + + + ++ + I++ G+H+ GE
Sbjct: 622 HLIVEEVKKTNLLKIKEKIEKIEKEGKIHENFKEIFDELRDILEMIKNSKCNDGMHIFGE 681
Query: 816 PPSALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQI 875
PS + V + +I L +I + + +GI + E +
Sbjct: 682 LPSGEKRVEFIKSI------------LEAIFIQN------NTMNSKRRGIAERSEAMHPG 723
Query: 876 TEASRGAISAFVEKTTNKKGQVVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRT 935
F K N K +V DV + G I + +
Sbjct: 724 YPNRGLPPMEFEYKDKNLKKKVSDVLN------GKSIED-------------------KK 758
Query: 936 LFEFVGECLKLVVADNELGSLKQALEGKYVEPGPGGDPIR-NPKVLPTGKNIHALDPQAI 994
L E + + + + +E+GSL + ++ KY+EPGP G R N +LPTG+N ++LDP I
Sbjct: 759 LEEKIKDINERIEKSDEIGSLLRGIDAKYIEPGPSGLITRGNYDILPTGRNFYSLDPYRI 818
Query: 995 PTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRP 1054
PT +A + ++ ++LI R ++ G+YPE +AL +D + GE + +L+++GV+P
Sbjct: 819 PTKSAYRVGVLLAEKLINRY-LEEEGRYPENIALYWMASDIMWADGEGMGMILYLLGVKP 877
Query: 1055 VSDTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEE 1114
V GRV +E + LEELGRPRIDV + SG+ RD+F N + L+D A+ VA LDEP E
Sbjct: 878 VYRG-GRVVGLEVIPLEELGRPRIDVTIRVSGITRDMFPNCIELVDEAIMKVANLDEPLE 936
Query: 1115 QNYVRKHALEQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
N+V+KH +E G+ RE+ R+F + G+Y + + AV S+W +++ L+
Sbjct: 937 MNFVKKHVVENLNK-GLSFRESTFRIFCSPPGTYGNGVKYAVYASAWENDEDLK 989
>sp|Q9HZQ3|COBN_PSEAE Aerobic cobaltochelatase subunit CobN OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=cobN PE=3 SV=1
Length = 1248
Score = 362 bits (930), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 270/884 (30%), Positives = 434/884 (49%), Gaps = 75/884 (8%)
Query: 320 PVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLDFAGPVERFFVDPVMKKP 379
PV+ L+ R+H+ + + L A+G +PI L + + + V+ +++
Sbjct: 200 PVVALLFYRTHLQAANTAFIARFCERLAAQGLNPLPIALASLKESACLAQ--VEDWLERS 257
Query: 380 MVNSAISLTGFALVGGPARQDHPRAIEALR--KLDVPYIVALPLVFQTTEEWLNSTLGLH 437
++ TGFA Q +P A E LR + DVP + A+ WL++ GL
Sbjct: 258 DAALIVNTTGFA-------QSNPEAPE-LRPFRRDVPVLQAI-CSLDNRPLWLDNPQGLG 308
Query: 438 PIQVALQVALPELDGGL--EPIVFAGRDPRTGKAH-------ALHKRVEQLCTRAIRWGE 488
P +A+ VALPELDG + PI F G R+ ++ A +R++ + A RW E
Sbjct: 309 PRDLAMHVALPELDGRIVTRPISFKGLAWRSERSESDVVCYLADDERMDFVAELARRWAE 368
Query: 489 LKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEA 548
L RK AEK++A+ + ++P G IG L+ ++ ++L+ L++ GY V+GLP +
Sbjct: 369 LARKPNAEKRVALVLANYPTRDGRIGNGVGLDTPAAALNILRALRQQGYPVDGLPASGTE 428
Query: 549 LIEEIIHDKEAQFSSPNLN-IAYKMGVREYQSLTPYATALEEN-------WGKPPGNLNS 600
LI +++ +L A + + +Y L +A E N WG+P +
Sbjct: 429 LIRQLLGGVSNDLEHLDLRPCAQSLALDDY--LACFARLPERNRQAVLARWGEPQQDPMF 486
Query: 601 DGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFKADAV 660
++V G +YG F+G+QP GY+ DP + P HG+ A+Y ++ ++ADA+
Sbjct: 487 RDGRMMVAGLRYGLTFVGIQPARGYQLDPAAVYHDPDLVPPHGYLAFYFWLRHAYRADAL 546
Query: 661 LHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYAANNPSEATIAKRRSYANTISY 720
LH G HG+LE++PGK VG+S C+PD+L+G +PN+Y + N+P E AKRR+ A I +
Sbjct: 547 LHVGKHGNLEWLPGKGVGLSAECWPDALLGPLPNIYPFIVNDPGEGAQAKRRTQAVIIDH 606
Query: 721 LTPPAENAGLYKGLKQLSELISSY--QSLKDTGRGPQIVSSIISTAKQCNLDKDVELPDE 778
L PP A Y L+ L L + SL D R Q+ I+ + LD+++
Sbjct: 607 LMPPLTRAESYGPLRDLERLADEFYDASLLDPRRAEQLRGEILVLLRDNRLDREI----- 661
Query: 779 GAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDE 838
G ++S + D + ++ + + +++ + GLHV GE PS + TL+ + + R + +
Sbjct: 662 GLQLS-DDPDSWLPQLDAYLCDLKESQIRDGLHVFGESPSGRLRLDTLLALLRVPRGDGK 720
Query: 839 IAS--LPSILAETVGRDIEDIYRGSDKGILKDVELLRQITEASRGAISAFVEKTTNKKGQ 896
A+ L LA+ +G + + D G EA +GA A +E+ + +
Sbjct: 721 GANAGLLKSLADDLGLGFDPL--ACDMG------------EAWQGARPACLEERGGEPWR 766
Query: 897 VVDVADKLSSILGFGINEPWIQYLSNTKFYRADRATLRTLFEFVGECLKLVVADNELGSL 956
+ + +L E + S +RA LR L E V L E+ L
Sbjct: 767 TLGDTRERLELLALHWIERCLGGESPPATWRASGEVLRGLCEQVAPTLD-ACGGAEIDGL 825
Query: 957 KQALEGKYVEPGPGGDPIRNP-KVLPTGKNIHALDPQAIPTTAA----MQSAKVVVDRLI 1011
ALEG++V GP G P R VLPTG+N ++D + +PT A QSA ++++R +
Sbjct: 826 LAALEGRFVPAGPSGAPSRGRLDVLPTGRNFFSVDVRNLPTPTAWRIGFQSANLLLERHL 885
Query: 1012 ERQKVDNGGKYPETVALVLWGTDNIKTYGESLAQVLWMIGVRPVSDTFG-RVNRVEPVSL 1070
+ G + + L +WGT ++T G+ +AQ L ++GVRPV RV E + +
Sbjct: 886 QEH-----GDHLRQLGLSVWGTATMRTGGDDIAQALALLGVRPVWQAGSQRVADFEILPV 940
Query: 1071 EELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYV-------RKHAL 1123
L RPR+DV + SG FRD F N + L D AV+ VAELDE EE N + R+
Sbjct: 941 SLLDRPRVDVTLRVSGFFRDAFANLIRLFDAAVQAVAELDEAEELNPLAARVRLERQRLE 1000
Query: 1124 EQAKALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQL 1167
Q A R+A R+F G+Y + + A+E W L
Sbjct: 1001 AQGTAPAEARRQAGWRIFGAKPGAYGAGVQGAIEERLWETRADL 1044
>sp|P29929|COBN_PSEDE Aerobic cobaltochelatase subunit CobN OS=Pseudomonas denitrificans
GN=cobN PE=1 SV=1
Length = 1275
Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 281/986 (28%), Positives = 444/986 (45%), Gaps = 122/986 (12%)
Query: 243 FWLGGSPDNLQNFLKMISGSYVPALRGQKIEYADPVLFLDTGIWHPLAPCMYDDVKEYLN 302
F GGS DN FL + A +K + A P+L GIW P A + V E+ +
Sbjct: 141 FTEGGS-DNAGLFLDYAAALVTGA---EKPQPAKPLL--KAGIWWPGAGVI--GVSEWQS 192
Query: 303 WYGTRKDTNEKLKGPDAPVIGLILQRSHIVTGDDSHYVAVIMELEARGAKVIPIFAGGLD 362
R E G + P +G+ R+ + +G+ A+I LEA G + +P+F L
Sbjct: 193 LVQGRMVARE---GFEPPTVGICFYRALVQSGETRPVEALIDALEAEGVRALPVFVSSLK 249
Query: 363 FAGPVERFFVDPVMKKPMVNSAISLTGFALVGGPARQDHPRAIEALRKLDVPYIVALPLV 422
A V + + + + ++ TGFA V P P +E+ P L ++
Sbjct: 250 DA--VSVGTLQAIFSEAAPDVVMNATGFA-VSSPGADRQPTVLEST---GAP---VLQVI 300
Query: 423 FQTTE--EWLNSTLGLHPIQVALQVALPELDGGL--EPIVFAGRDPRTGKAHA------- 471
F + +W S GL +A+ VALPE+DG + + F K A
Sbjct: 301 FSGSSRAQWETSPQGLMARDLAMNVALPEVDGRILARAVSFKAASIYDAKVEANIVGHEP 360
Query: 472 LHKRVEQLCTRAIRWGELKRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKD 531
L RV A+ W ++R AE+++AI + ++P G +G L+ + VL
Sbjct: 361 LEGRVRFAADLAVNWANVRRAEPAERRIAIVMANYPNRDGRLGNGVGLDTPAGTVEVLSA 420
Query: 532 LQRDGYNVEGLPETSEALIEEIIHDKEAQFSSPNLNIAYKMGVREYQSLTPYATALEE-- 589
+ R+GY V +P +ALI ++ + P ++ +RE SL Y T +
Sbjct: 421 MAREGYAVGEVPADGDALIRFLM-------AGPTNAASHDREIRERISLNDYKTFFDSLP 473
Query: 590 ---------NWGKPPGN-LNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSAS 639
WG P + DG L + +G V +G+QP GY DP S
Sbjct: 474 KQIKDEVAGRWGVPEADPFFLDGAFALPLAR-FGEVIVGIQPARGYNIDPKESYHSPDLV 532
Query: 640 PHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNVYYYA 699
P HG+ A+Y+F+ + F A A++H G HG+LE++PGK + +S+ CYP+++ G +P++Y +
Sbjct: 533 PPHGYLAFYAFLRQQFGAQAIVHMGKHGNLEWLPGKALALSETCYPEAIFGPLPHIYPFI 592
Query: 700 ANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLK--DTGRGPQIV 757
N+P E T AKRR+ A I +LTPP A Y LK L L+ Y D R +
Sbjct: 593 VNDPGEGTQAKRRTSAVIIDHLTPPLTRAESYGPLKDLEALVDEYYDAAGGDPRRLRLLS 652
Query: 758 SSIISTAKQCNLDKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPP 817
I+ + LD D + D G D + K+ + + +++ + GLH+ G P
Sbjct: 653 RQILDLVRDIGLDSDAGI-DRG-----DSDDKALEKLDAYLCDLKEMQIRDGLHIFGVAP 706
Query: 818 SALEAVATLVNIAALDRPEDEIASLPSILAETVGRDIEDIYRGSDKGILKDVELLRQITE 877
+ T + +A +A +P L E + ++ + I D L
Sbjct: 707 EGR--LLTDLTVA--------LARVPRGLGEGGDQSLQ-------RAIAADAGL------ 743
Query: 878 ASRG-AISAFVEKTTNKKGQVVDVADKL---------SSILGFGINEPW---------IQ 918
RG AI + Q D D + SIL + PW I+
Sbjct: 744 --RGFAIPTSAGGNPARDAQPFDPLDCVMSDTWTGPKPSILADLSDAPWRTAGDTVERIE 801
Query: 919 YLS----NTKFYRADR-ATLRTLFEFVGECLKLVVADN---ELGSLKQALEGKYVEPGPG 970
L+ + + D A R + + LK ++++ E+ L G++V PGP
Sbjct: 802 LLAANLVSGELACPDHWANTRAVLGEIETRLKPSISNSGAAEMTGFLTGLSGRFVAPGPS 861
Query: 971 GDPIRN-PKVLPTGKNIHALDPQAIPTTAAMQSAKVVVDRLIERQKVDNGGKYPETVALV 1029
G P R P VLPTG+N +++D +A+PT AA + K + LI R D+ G++P + L
Sbjct: 862 GAPTRGRPDVLPTGRNFYSVDSRAVPTPAAYELGKKSAELLIRRYLQDH-GEWPSSFGLT 920
Query: 1030 LWGTDNIKTYGESLAQVLWMIGVRPVSDTFG-RVNRVEPVSLEELGRPRIDVVVNCSGVF 1088
WGT N++T G+ +AQ L +IG +P D RV E V L LGRPR+DV + SG F
Sbjct: 921 AWGTANMRTGGDDIAQALALIGAKPTWDMVSRRVMGYEIVPLAVLGRPRVDVTLRISGFF 980
Query: 1089 RDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQAKAL-------GIDVREAATRVF 1141
RD F +Q+ L D+A++ VA L+E + N + +++ L R A+ RVF
Sbjct: 981 RDAFPDQIALFDKAIRAVA-LEEDDADNMIAARMRAESRRLEAEGVEAAEAARRASYRVF 1039
Query: 1142 SNASGSYSSNINLAVENSSWNDEKQL 1167
G+Y + + ++ W + L
Sbjct: 1040 GAKPGAYGAALQALIDEKGWETKADL 1065
>sp|O18054|PFD3_CAEEL Probable prefoldin subunit 3 OS=Caenorhabditis elegans GN=pfd-3
PE=3 SV=1
Length = 185
Score = 37.7 bits (86), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 766 QCNLDKDVELPDEGAEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVAT 825
+ L +DVE ++S +E ++V+ + Y K +ES +L + + + P E +
Sbjct: 15 KSELIEDVESWLTKEKLSIEEAEVVLREKYGKYKYVESSMLAQKVRMSEKIPE-FENSLS 73
Query: 826 LVNIAALDRPEDEIASLPSILAETVGRDIE-------DIYRGSDKGILKDVELLRQITEA 878
+++ R DE +L++ V I+ G++ + D+E R++ +
Sbjct: 74 IIDTLIAKRAADESFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDLENARKLLDK 133
Query: 879 SRGAISAFVEKTTNK----KGQVVDVADKLSSILGFGINE 914
+RG++ V++ TN+ K Q+ +S I+ FG+N+
Sbjct: 134 NRGSVQKVVDELTNELSYIKDQITTTEVNMSHIVNFGVNK 173
>sp|P00371|OXDA_PIG D-amino-acid oxidase OS=Sus scrofa GN=DAO PE=1 SV=2
Length = 347
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 1069 SLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPEEQNYVRKHALEQA-- 1126
S EE+ R DV++NC+GV+ + + LL + ++D P +N++ H LE+
Sbjct: 166 SFEEVARGGADVIINCTGVWAGV-LQPDPLLQPGRGQIIKVDAPWLKNFIITHDLERGIY 224
Query: 1127 -KALGIDVREAATRVFSNASGSYSSNINLAVENSSWNDEKQLQ 1168
I +A T + G+++ N+ N+ W +L+
Sbjct: 225 NSPYIIPGLQAVTLGGTFQVGNWNEINNIQDHNTIWEGCCRLE 267
>sp|B2UMU0|RL3_AKKM8 50S ribosomal protein L3 OS=Akkermansia muciniphila (strain ATCC
BAA-835) GN=rplC PE=3 SV=1
Length = 211
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 14/137 (10%)
Query: 497 KKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETSEALIEEIIHD 556
KK+ +T F + G + ++V + F+ +K +DGYN A+
Sbjct: 8 KKVGMTRL-FDQESGAMVPVTVIDVKGNTFAQIKTEDKDGYN---------AIQVAFDAQ 57
Query: 557 KEAQFSSPNLNIAYKMGVREYQSLTPY---ATALEENWGKPPG-NLNSDGENLLVYGKQY 612
KE++ + P K+G++ + L + A+ L K PG +L S G+ + V G
Sbjct: 58 KESRVAKPQAGHFKKLGIQPTKLLKEFRVEASELPAEGAKDPGVDLFSAGQWVDVIGTSK 117
Query: 613 GNVFIGVQPTFGYEGDP 629
G F G + G P
Sbjct: 118 GKGFQGAMRRHNFHGSP 134
>sp|P49299|CYSZ_CUCMA Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1
Length = 516
Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 430 LNSTLGLHPIQVALQVALPELDGGLEPIVFAGRDPRTGKAHALHKRVEQLCTRAIRWGEL 489
+ S+L H + VA PEL G IV D RTGK + + E I+ +L
Sbjct: 34 MASSLEAHCVSAQTMVAPPELVKGTLTIV----DERTGKRYQVQVSEEG----TIKATDL 85
Query: 490 KRKTKAEKKLAITVFSFPPDKGNIGTAAYLNVFSSIFSVLKDLQRDGYNVEGLPETS 546
K+ T + ++ D G + TA + S I L L+ GY +E L E+S
Sbjct: 86 KKITTGPNDKGLKLY----DPGYLNTAPVRSSISYIDGDLGILRYRGYPIEELAESS 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 441,880,089
Number of Sequences: 539616
Number of extensions: 19774483
Number of successful extensions: 49660
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 49571
Number of HSP's gapped (non-prelim): 34
length of query: 1171
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1042
effective length of database: 121,958,995
effective search space: 127081272790
effective search space used: 127081272790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)