Query 001057
Match_columns 1170
No_of_seqs 625 out of 3422
Neff 4.7
Searched_HMMs 46136
Date Thu Mar 28 14:38:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001057.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001057hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0614 cGMP-dependent protein 100.0 5.6E-84 1.2E-88 730.0 13.4 484 553-1079 176-714 (732)
2 KOG0606 Microtubule-associated 100.0 2.1E-77 4.5E-82 720.1 31.1 1033 67-1156 76-1190(1205)
3 KOG0605 NDR and related serine 100.0 1.7E-69 3.6E-74 620.0 28.8 375 754-1150 137-533 (550)
4 KOG0598 Ribosomal protein S6 k 100.0 1.2E-64 2.7E-69 561.8 28.6 298 754-1083 21-322 (357)
5 KOG0616 cAMP-dependent protein 100.0 2.7E-62 5.9E-67 529.9 24.0 288 755-1078 41-334 (355)
6 KOG0694 Serine/threonine prote 100.0 1.6E-60 3.4E-65 557.8 26.4 295 753-1081 363-663 (694)
7 KOG0690 Serine/threonine prote 100.0 7.8E-58 1.7E-62 497.8 14.5 299 752-1083 162-465 (516)
8 KOG0610 Putative serine/threon 100.0 1E-56 2.3E-61 502.8 23.1 317 752-1069 71-416 (459)
9 KOG0612 Rho-associated, coiled 100.0 2.7E-57 5.9E-62 547.9 16.1 293 754-1077 71-371 (1317)
10 KOG0592 3-phosphoinositide-dep 100.0 4.2E-56 9.1E-61 509.6 24.9 286 754-1062 69-355 (604)
11 KOG0615 Serine/threonine prote 100.0 7.2E-55 1.6E-59 487.4 17.7 263 756-1052 170-444 (475)
12 KOG0575 Polo-like serine/threo 100.0 2.7E-53 5.8E-58 492.7 28.1 256 758-1049 18-273 (592)
13 KOG0608 Warts/lats-like serine 100.0 3.4E-53 7.4E-58 487.6 22.2 317 756-1078 627-962 (1034)
14 KOG0696 Serine/threonine prote 100.0 3.5E-53 7.6E-58 471.0 16.9 299 752-1083 343-647 (683)
15 KOG0986 G protein-coupled rece 100.0 4.2E-52 9E-57 468.1 16.5 290 754-1077 181-486 (591)
16 cd05628 STKc_NDR1 Catalytic do 100.0 9.2E-50 2E-54 447.3 33.4 316 758-1076 1-325 (363)
17 cd05599 STKc_NDR_like Catalyti 100.0 7.8E-50 1.7E-54 445.6 30.4 318 758-1077 1-329 (364)
18 cd05612 STKc_PRKX_like Catalyt 100.0 8.7E-50 1.9E-54 432.9 27.4 284 758-1077 1-289 (291)
19 PTZ00263 protein kinase A cata 100.0 1.4E-49 3.1E-54 440.2 29.1 271 753-1059 13-285 (329)
20 cd05585 STKc_YPK1_like Catalyt 100.0 2.2E-49 4.8E-54 434.4 30.1 282 766-1080 1-285 (312)
21 cd05571 STKc_PKB Catalytic dom 100.0 2E-49 4.4E-54 437.4 29.1 283 764-1079 1-288 (323)
22 cd05629 STKc_NDR_like_fungal C 100.0 3.5E-49 7.7E-54 444.2 31.4 316 758-1076 1-337 (377)
23 KOG0581 Mitogen-activated prot 100.0 3.5E-50 7.7E-55 446.8 22.8 259 754-1051 75-341 (364)
24 cd05625 STKc_LATS1 Catalytic d 100.0 3.6E-49 7.8E-54 444.9 31.2 317 759-1077 2-339 (382)
25 cd05587 STKc_cPKC Catalytic do 100.0 1.5E-48 3.3E-53 430.0 32.0 286 759-1077 1-292 (324)
26 KOG0595 Serine/threonine-prote 100.0 2.1E-49 4.5E-54 444.1 25.4 262 755-1051 7-274 (429)
27 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-48 4.3E-53 428.9 32.1 288 759-1079 1-293 (323)
28 PTZ00426 cAMP-dependent protei 100.0 1.1E-48 2.4E-53 437.5 29.0 282 752-1069 24-310 (340)
29 cd05627 STKc_NDR2 Catalytic do 100.0 1.4E-48 3.1E-53 436.7 29.3 317 758-1076 1-325 (360)
30 KOG0583 Serine/threonine prote 100.0 8.2E-49 1.8E-53 447.4 27.8 260 755-1050 14-280 (370)
31 cd05626 STKc_LATS2 Catalytic d 100.0 6.3E-48 1.4E-52 435.8 34.1 315 759-1077 2-339 (381)
32 cd05590 STKc_nPKC_eta Catalyti 100.0 3.1E-48 6.7E-53 428.0 27.8 281 764-1077 1-288 (320)
33 KOG0695 Serine/threonine prote 100.0 2.1E-49 4.6E-54 432.5 18.0 296 753-1081 245-555 (593)
34 cd05631 STKc_GRK4 Catalytic do 100.0 5.8E-48 1.3E-52 416.9 28.7 274 759-1066 1-284 (285)
35 cd05593 STKc_PKB_gamma Catalyt 100.0 4.7E-48 1E-52 428.5 28.1 284 764-1080 1-289 (328)
36 cd05598 STKc_LATS Catalytic do 100.0 1E-47 2.2E-52 431.6 31.2 318 758-1076 1-334 (376)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.5E-48 1.6E-52 425.4 28.8 282 758-1075 1-288 (333)
38 cd05595 STKc_PKB_beta Catalyti 100.0 8.6E-48 1.9E-52 425.0 28.5 282 764-1078 1-287 (323)
39 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.4E-48 1.4E-52 426.0 26.5 313 758-1076 1-317 (350)
40 cd05592 STKc_nPKC_theta_delta 100.0 2.4E-47 5.2E-52 420.3 30.7 281 764-1079 1-285 (316)
41 cd05615 STKc_cPKC_alpha Cataly 100.0 3.5E-47 7.5E-52 420.2 31.4 288 759-1079 1-293 (323)
42 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-47 4.6E-52 422.6 29.7 281 764-1077 1-295 (327)
43 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-47 5.2E-52 420.0 29.6 271 764-1067 1-278 (321)
44 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-47 3E-52 422.5 27.6 283 764-1079 1-289 (325)
45 cd05586 STKc_Sck1_like Catalyt 100.0 9.5E-48 2.1E-52 424.1 26.0 282 766-1079 1-290 (330)
46 cd05589 STKc_PKN Catalytic dom 100.0 3.7E-47 8.1E-52 418.9 29.1 284 760-1077 1-292 (324)
47 cd05604 STKc_SGK3 Catalytic do 100.0 4.1E-47 8.9E-52 418.8 29.0 281 764-1077 1-286 (325)
48 cd05575 STKc_SGK Catalytic dom 100.0 4.8E-47 1E-51 417.9 28.6 282 764-1078 1-287 (323)
49 cd05588 STKc_aPKC Catalytic do 100.0 9.2E-47 2E-51 417.8 29.5 281 764-1077 1-297 (329)
50 cd05620 STKc_nPKC_delta Cataly 100.0 9.8E-47 2.1E-51 415.4 29.3 279 764-1077 1-283 (316)
51 KOG0588 Serine/threonine prote 100.0 9E-48 2E-52 447.9 21.5 261 756-1053 10-271 (786)
52 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-46 2.9E-51 414.1 29.7 283 764-1079 1-289 (318)
53 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-46 2.4E-51 415.6 28.5 282 764-1080 1-286 (316)
54 cd05601 STKc_CRIK Catalytic do 100.0 8.9E-47 1.9E-51 415.7 26.4 286 758-1077 1-296 (330)
55 cd05614 STKc_MSK2_N N-terminal 100.0 2E-46 4.4E-51 413.2 29.0 278 759-1068 1-292 (332)
56 cd05603 STKc_SGK2 Catalytic do 100.0 2.7E-46 5.8E-51 411.1 29.7 270 764-1066 1-274 (321)
57 cd05597 STKc_DMPK_like Catalyt 100.0 2.9E-46 6.3E-51 414.2 30.1 289 758-1076 1-298 (331)
58 cd05623 STKc_MRCK_alpha Cataly 100.0 3.3E-46 7.1E-51 413.4 30.2 282 758-1069 1-290 (332)
59 cd05618 STKc_aPKC_iota Catalyt 100.0 2.9E-46 6.3E-51 414.4 29.5 280 764-1076 1-296 (329)
60 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-46 3.6E-51 414.0 27.4 281 764-1077 1-286 (325)
61 cd05624 STKc_MRCK_beta Catalyt 100.0 2.6E-46 5.6E-51 414.6 29.0 282 758-1069 1-290 (331)
62 cd05622 STKc_ROCK1 Catalytic d 100.0 5.7E-46 1.2E-50 420.3 30.3 283 754-1068 39-329 (371)
63 cd05584 STKc_p70S6K Catalytic 100.0 3.4E-46 7.3E-51 411.8 27.8 264 763-1059 1-270 (323)
64 cd05596 STKc_ROCK Catalytic do 100.0 3.9E-46 8.4E-51 421.1 28.9 289 754-1076 39-338 (370)
65 cd05621 STKc_ROCK2 Catalytic d 100.0 6.1E-46 1.3E-50 420.3 30.2 290 755-1076 40-338 (370)
66 KOG0597 Serine-threonine prote 100.0 1.2E-47 2.6E-52 439.4 16.3 257 757-1051 1-257 (808)
67 cd05582 STKc_RSK_N N-terminal 100.0 2.2E-46 4.7E-51 411.3 24.7 270 764-1067 2-278 (318)
68 KOG0591 NIMA (never in mitosis 100.0 5.7E-48 1.2E-52 416.1 10.1 250 753-1035 14-274 (375)
69 KOG0593 Predicted protein kina 100.0 3.6E-47 7.7E-52 413.1 15.5 260 757-1051 1-290 (396)
70 KOG0580 Serine/threonine prote 100.0 3.9E-47 8.4E-52 403.2 14.7 261 752-1050 16-278 (281)
71 KOG0585 Ca2+/calmodulin-depend 100.0 1.8E-46 3.9E-51 425.0 20.6 270 752-1050 91-377 (576)
72 cd05605 STKc_GRK4_like Catalyt 100.0 2.8E-45 6E-50 396.1 28.8 273 759-1065 1-283 (285)
73 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-45 4.6E-50 396.0 27.4 267 766-1065 1-279 (280)
74 KOG0032 Ca2+/calmodulin-depend 100.0 2E-45 4.4E-50 421.0 27.2 261 756-1051 33-299 (382)
75 KOG0661 MAPK related serine/th 100.0 7.1E-47 1.5E-51 428.8 13.8 260 755-1051 7-297 (538)
76 cd05609 STKc_MAST Catalytic do 100.0 2.2E-44 4.8E-49 392.0 32.2 297 758-1069 1-297 (305)
77 KOG0033 Ca2+/calmodulin-depend 100.0 2.9E-47 6.4E-52 404.4 8.6 262 755-1051 8-273 (355)
78 KOG0198 MEKK and related serin 100.0 7.9E-46 1.7E-50 413.5 20.5 261 757-1051 16-282 (313)
79 cd05580 STKc_PKA Catalytic dom 100.0 2.7E-44 5.8E-49 388.0 30.8 274 758-1067 1-278 (290)
80 cd07848 STKc_CDKL5 Catalytic d 100.0 1.2E-44 2.5E-49 388.3 26.3 258 758-1048 1-287 (287)
81 cd05607 STKc_GRK7 Catalytic do 100.0 2E-44 4.3E-49 387.9 27.8 267 766-1065 1-276 (277)
82 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-44 4.3E-49 389.9 26.6 256 757-1048 4-288 (288)
83 KOG0611 Predicted serine/threo 100.0 1.7E-45 3.8E-50 409.2 16.6 257 755-1049 50-307 (668)
84 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.7E-44 7.9E-49 389.9 26.1 261 757-1053 4-296 (303)
85 KOG0578 p21-activated serine/t 100.0 3.4E-45 7.4E-50 422.7 19.0 256 758-1050 273-528 (550)
86 cd05630 STKc_GRK6 Catalytic do 100.0 7.8E-44 1.7E-48 385.4 28.4 275 759-1066 1-284 (285)
87 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.5E-44 1.6E-48 390.5 27.8 262 759-1052 1-297 (338)
88 KOG0600 Cdc2-related protein k 100.0 9.9E-45 2.1E-49 413.8 19.9 263 754-1050 113-405 (560)
89 cd05574 STKc_phototropin_like 100.0 4.5E-43 9.8E-48 382.3 31.4 308 758-1067 1-311 (316)
90 cd05632 STKc_GRK5 Catalytic do 100.0 4.5E-43 9.8E-48 378.8 29.3 277 759-1066 1-284 (285)
91 KOG0663 Protein kinase PITSLRE 100.0 3.8E-44 8.1E-49 393.5 20.8 265 752-1051 70-367 (419)
92 KOG0660 Mitogen-activated prot 100.0 2.5E-44 5.4E-49 399.1 18.8 261 758-1051 22-316 (359)
93 KOG0582 Ste20-like serine/thre 100.0 2.1E-43 4.5E-48 398.5 25.7 268 754-1052 22-300 (516)
94 cd06649 PKc_MEK2 Catalytic dom 100.0 6.8E-43 1.5E-47 386.8 29.5 260 756-1052 3-308 (331)
95 KOG0599 Phosphorylase kinase g 100.0 9.3E-45 2E-49 389.5 13.0 261 757-1051 16-289 (411)
96 KOG0659 Cdk activating kinase 100.0 7.6E-44 1.7E-48 382.4 19.8 259 758-1051 2-287 (318)
97 cd07862 STKc_CDK6 Catalytic do 100.0 7.5E-43 1.6E-47 374.8 25.9 255 758-1048 1-290 (290)
98 KOG4717 Serine/threonine prote 100.0 6.8E-44 1.5E-48 404.4 18.7 259 757-1053 17-278 (864)
99 PTZ00036 glycogen synthase kin 100.0 8.2E-43 1.8E-47 404.2 27.4 256 755-1052 63-358 (440)
100 cd05611 STKc_Rim15_like Cataly 100.0 1.6E-42 3.4E-47 366.0 26.0 257 764-1054 2-260 (260)
101 cd07863 STKc_CDK4 Catalytic do 100.0 1.8E-42 3.8E-47 370.9 25.8 254 759-1048 1-288 (288)
102 PHA03212 serine/threonine kina 100.0 1.4E-42 3.1E-47 396.6 26.4 256 754-1051 88-382 (391)
103 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.8E-42 6.1E-47 376.2 26.6 260 756-1051 4-292 (309)
104 cd06625 STKc_MEKK3_like Cataly 100.0 6.6E-42 1.4E-46 360.5 28.1 260 758-1048 2-263 (263)
105 cd05577 STKc_GRK Catalytic dom 100.0 3.7E-42 8.1E-47 368.4 26.5 266 766-1065 1-276 (277)
106 PTZ00284 protein kinase; Provi 100.0 2.8E-42 6E-47 400.9 27.3 255 756-1051 127-444 (467)
107 cd07876 STKc_JNK2 Catalytic do 100.0 5.3E-42 1.2E-46 383.1 28.2 258 755-1050 18-320 (359)
108 cd05610 STKc_MASTL Catalytic d 100.0 1.2E-41 2.5E-46 414.1 33.5 151 757-907 3-153 (669)
109 cd07853 STKc_NLK Catalytic dom 100.0 3.5E-42 7.6E-47 386.9 26.2 261 759-1053 1-296 (372)
110 cd06650 PKc_MEK1 Catalytic dom 100.0 8.3E-42 1.8E-46 379.4 28.1 257 756-1051 3-305 (333)
111 cd05579 STKc_MAST_like Catalyt 100.0 5.3E-42 1.1E-46 358.5 24.7 265 766-1053 1-265 (265)
112 cd07875 STKc_JNK1 Catalytic do 100.0 1.1E-41 2.5E-46 381.2 28.9 257 756-1050 22-323 (364)
113 KOG0201 Serine/threonine prote 100.0 4.4E-44 9.4E-49 403.8 8.9 257 758-1051 13-269 (467)
114 KOG0658 Glycogen synthase kina 100.0 5.9E-43 1.3E-47 388.7 17.8 252 758-1051 24-312 (364)
115 cd05633 STKc_GRK3 Catalytic do 100.0 1.1E-41 2.4E-46 367.5 27.3 260 765-1059 1-269 (279)
116 PLN00034 mitogen-activated pro 100.0 3.7E-42 8E-47 384.1 24.0 257 754-1051 70-334 (353)
117 cd05572 STKc_cGK_PKG Catalytic 100.0 1.3E-41 2.9E-46 359.3 26.7 257 766-1054 1-261 (262)
118 KOG0192 Tyrosine kinase specif 100.0 9.9E-42 2.2E-46 388.2 26.4 256 755-1044 38-301 (362)
119 KOG0594 Protein kinase PCTAIRE 100.0 2.6E-42 5.6E-47 382.9 20.7 261 757-1052 10-309 (323)
120 cd06644 STKc_STK10_LOK Catalyt 100.0 1.8E-41 4E-46 365.7 26.3 266 757-1058 11-282 (292)
121 PF00069 Pkinase: Protein kina 100.0 4.6E-42 1E-46 359.5 21.0 255 760-1048 1-260 (260)
122 cd08223 STKc_Nek4 Catalytic do 100.0 6.6E-41 1.4E-45 351.7 29.7 254 759-1048 1-257 (257)
123 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.9E-41 6.3E-46 366.3 27.6 261 756-1052 4-293 (301)
124 cd07874 STKc_JNK3 Catalytic do 100.0 1.8E-41 3.9E-46 377.9 26.5 258 756-1051 15-317 (355)
125 cd05102 PTKc_VEGFR3 Catalytic 100.0 2E-41 4.3E-46 373.9 26.4 257 755-1043 4-331 (338)
126 cd05606 STKc_beta_ARK Catalyti 100.0 4E-41 8.6E-46 362.5 27.7 260 765-1059 1-269 (278)
127 cd07878 STKc_p38beta_MAPK11 Ca 100.0 8.5E-42 1.8E-46 378.2 23.1 256 757-1051 14-304 (343)
128 cd08529 STKc_FA2-like Catalyti 100.0 8.4E-41 1.8E-45 350.0 29.3 254 759-1048 1-256 (256)
129 PTZ00267 NIMA-related protein 100.0 3E-41 6.6E-46 394.6 28.7 259 757-1051 66-329 (478)
130 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.6E-41 1.7E-45 353.8 28.4 261 759-1048 1-267 (267)
131 PTZ00283 serine/threonine prot 100.0 4.4E-41 9.5E-46 396.1 29.5 263 755-1051 29-303 (496)
132 cd06645 STKc_MAP4K3 Catalytic 100.0 2E-41 4.4E-46 358.9 23.8 256 756-1047 7-267 (267)
133 cd06631 STKc_YSK4 Catalytic do 100.0 6.7E-41 1.5E-45 354.6 27.6 262 759-1048 1-265 (265)
134 cd06611 STKc_SLK_like Catalyti 100.0 3.7E-41 8.1E-46 360.0 25.3 260 757-1052 4-269 (280)
135 PHA03207 serine/threonine kina 100.0 6.1E-41 1.3E-45 381.2 28.6 264 755-1058 89-388 (392)
136 KOG0589 Serine/threonine prote 100.0 3.5E-42 7.6E-47 394.6 18.2 258 757-1050 3-263 (426)
137 cd06643 STKc_SLK Catalytic dom 100.0 7.1E-41 1.5E-45 358.8 26.6 257 759-1051 6-268 (282)
138 cd05578 STKc_Yank1 Catalytic d 100.0 3.8E-41 8.3E-46 355.1 23.9 255 759-1048 1-258 (258)
139 KOG0667 Dual-specificity tyros 100.0 1.8E-41 3.9E-46 397.4 23.2 253 758-1051 186-508 (586)
140 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-40 2.5E-45 355.7 26.7 255 759-1048 1-285 (285)
141 cd06615 PKc_MEK Catalytic doma 100.0 1.6E-40 3.5E-45 363.3 28.4 257 758-1051 1-293 (308)
142 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-40 2.9E-45 357.7 27.3 269 759-1059 1-280 (288)
143 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.4E-40 5.1E-45 348.0 28.1 260 758-1048 1-267 (267)
144 cd07868 STKc_CDK8 Catalytic do 100.0 8.2E-41 1.8E-45 364.7 25.1 250 763-1048 6-317 (317)
145 cd06651 STKc_MEKK3 Catalytic d 100.0 2.6E-40 5.7E-45 351.5 28.4 260 758-1049 2-265 (266)
146 cd06619 PKc_MKK5 Catalytic dom 100.0 1.6E-40 3.4E-45 356.8 26.8 253 758-1052 1-260 (279)
147 cd06652 STKc_MEKK2 Catalytic d 100.0 4.5E-40 9.8E-45 348.9 29.7 260 758-1049 2-265 (265)
148 cd06612 STKc_MST1_2 Catalytic 100.0 1.8E-40 4E-45 347.4 26.3 253 758-1048 3-256 (256)
149 cd06646 STKc_MAP4K5 Catalytic 100.0 1E-40 2.2E-45 353.6 24.7 256 756-1047 7-267 (267)
150 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.6E-40 5.6E-45 352.5 27.5 257 758-1048 1-286 (286)
151 cd06613 STKc_MAP4K3_like Catal 100.0 2.6E-40 5.5E-45 347.5 27.1 254 758-1047 3-262 (262)
152 cd06630 STKc_MEKK1 Catalytic d 100.0 1.7E-40 3.6E-45 350.8 25.8 261 759-1049 1-268 (268)
153 cd07839 STKc_CDK5 Catalytic do 100.0 8.3E-41 1.8E-45 357.3 23.7 255 759-1048 1-284 (284)
154 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-40 3.2E-45 352.6 25.3 253 758-1048 6-272 (272)
155 cd05613 STKc_MSK1_N N-terminal 100.0 3.2E-40 7E-45 355.1 27.7 269 759-1059 1-282 (290)
156 cd06654 STKc_PAK1 Catalytic do 100.0 3.6E-40 7.8E-45 358.7 28.1 258 757-1051 19-276 (296)
157 cd06609 STKc_MST3_like Catalyt 100.0 2.3E-40 5.1E-45 352.8 26.0 257 758-1052 1-258 (274)
158 cd08218 STKc_Nek1 Catalytic do 100.0 5.9E-40 1.3E-44 345.0 28.7 254 759-1048 1-256 (256)
159 cd05061 PTKc_InsR Catalytic do 100.0 5.5E-40 1.2E-44 354.2 29.1 266 756-1053 4-288 (288)
160 PHA02988 hypothetical protein; 100.0 2.6E-40 5.6E-45 359.2 26.5 244 764-1043 26-276 (283)
161 PHA03209 serine/threonine kina 100.0 9.5E-41 2.1E-45 374.7 23.8 253 755-1051 63-357 (357)
162 cd08227 PK_STRAD_alpha Pseudok 100.0 2.1E-40 4.5E-45 365.4 26.0 264 762-1052 2-314 (327)
163 cd08221 STKc_Nek9 Catalytic do 100.0 8.4E-40 1.8E-44 343.8 29.3 254 759-1048 1-256 (256)
164 cd05581 STKc_PDK1 Catalytic do 100.0 2.2E-40 4.7E-45 350.5 24.6 278 758-1048 1-280 (280)
165 cd08217 STKc_Nek2 Catalytic do 100.0 6.9E-40 1.5E-44 342.5 28.0 254 759-1048 1-265 (265)
166 cd06656 STKc_PAK3 Catalytic do 100.0 3.1E-40 6.7E-45 359.4 26.3 258 757-1051 18-275 (297)
167 cd06655 STKc_PAK2 Catalytic do 100.0 4.8E-40 1E-44 358.2 27.4 257 758-1051 19-275 (296)
168 cd06608 STKc_myosinIII_like Ca 100.0 4.5E-40 9.8E-45 346.5 26.1 255 757-1048 5-275 (275)
169 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.1E-40 4.5E-45 355.3 23.7 255 758-1051 1-268 (286)
170 cd06639 STKc_myosinIIIB Cataly 100.0 1.3E-39 2.8E-44 350.6 29.5 257 756-1049 20-291 (291)
171 cd06638 STKc_myosinIIIA Cataly 100.0 7.5E-40 1.6E-44 350.3 27.4 257 755-1048 15-286 (286)
172 cd05048 PTKc_Ror Catalytic Dom 100.0 4.6E-40 9.9E-45 351.4 25.4 252 756-1039 3-276 (283)
173 cd05096 PTKc_DDR1 Catalytic do 100.0 1.2E-39 2.7E-44 354.1 28.6 258 756-1043 3-302 (304)
174 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-39 2.5E-44 341.0 27.3 255 759-1048 1-258 (258)
175 KOG0604 MAP kinase-activated p 100.0 1.3E-41 2.9E-46 369.3 12.9 254 756-1051 59-328 (400)
176 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-39 2.8E-44 342.9 27.5 249 759-1044 1-251 (255)
177 KOG0579 Ste20-like serine/thre 100.0 6.8E-42 1.5E-46 393.6 11.0 261 758-1054 32-298 (1187)
178 cd08220 STKc_Nek8 Catalytic do 100.0 1.3E-39 2.9E-44 340.9 27.4 253 759-1048 1-256 (256)
179 KOG0607 MAP kinase-interacting 100.0 2.6E-41 5.7E-46 368.8 14.8 262 764-1054 84-370 (463)
180 cd06623 PKc_MAPKK_plant_like C 100.0 1.4E-39 3E-44 341.6 27.2 258 758-1052 1-263 (264)
181 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.3E-40 9.3E-45 351.5 23.6 257 758-1048 1-286 (286)
182 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.6E-39 3.4E-44 346.8 27.8 255 756-1043 3-262 (266)
183 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-39 2.5E-44 348.8 26.5 255 756-1048 14-282 (282)
184 cd07841 STKc_CDK7 Catalytic do 100.0 7.7E-40 1.7E-44 352.8 25.3 259 759-1051 1-288 (298)
185 cd07832 STKc_CCRK Catalytic do 100.0 8.5E-40 1.8E-44 348.5 25.2 257 759-1049 1-286 (286)
186 cd06605 PKc_MAPKK Catalytic do 100.0 5.7E-40 1.2E-44 346.1 23.4 255 758-1051 1-263 (265)
187 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.3E-40 1.8E-44 351.5 24.7 256 756-1050 3-271 (284)
188 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.8E-39 6E-44 343.5 27.9 259 759-1048 2-272 (272)
189 cd07844 STKc_PCTAIRE_like Cata 100.0 2E-39 4.3E-44 348.5 26.1 256 757-1048 4-291 (291)
190 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-39 4.1E-44 353.4 26.2 261 756-1051 5-296 (309)
191 cd05049 PTKc_Trk Catalytic dom 100.0 1.7E-39 3.6E-44 345.9 25.2 255 757-1043 4-278 (280)
192 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-39 3.5E-44 348.1 25.3 258 758-1053 4-261 (277)
193 cd07867 STKc_CDC2L6 Catalytic 100.0 1.9E-39 4.2E-44 352.7 26.1 249 764-1048 7-317 (317)
194 cd05123 STKc_AGC Catalytic dom 100.0 2.1E-39 4.5E-44 338.3 25.0 250 766-1048 1-250 (250)
195 cd08228 STKc_Nek6 Catalytic do 100.0 4.4E-39 9.5E-44 340.4 27.6 252 758-1041 2-260 (267)
196 cd07837 STKc_CdkB_plant Cataly 100.0 2.4E-39 5.1E-44 347.9 25.8 257 758-1049 1-295 (295)
197 cd07833 STKc_CDKL Catalytic do 100.0 2.2E-39 4.8E-44 345.7 25.3 258 758-1048 1-288 (288)
198 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.2E-39 7E-44 344.2 26.6 258 758-1054 1-270 (283)
199 cd06626 STKc_MEKK4 Catalytic d 100.0 6.7E-39 1.5E-43 337.1 28.4 259 759-1048 1-264 (264)
200 cd06624 STKc_ASK Catalytic dom 100.0 5.9E-39 1.3E-43 340.9 28.1 252 760-1048 10-268 (268)
201 cd07850 STKc_JNK Catalytic dom 100.0 2.9E-39 6.3E-44 360.4 27.0 257 756-1050 14-316 (353)
202 cd08215 STKc_Nek Catalytic dom 100.0 6.9E-39 1.5E-43 333.0 27.9 254 759-1048 1-258 (258)
203 cd05106 PTKc_CSF-1R Catalytic 100.0 1.7E-39 3.8E-44 367.9 25.3 258 755-1043 35-369 (374)
204 cd07860 STKc_CDK2_3 Catalytic 100.0 1.8E-39 3.9E-44 347.0 24.0 255 759-1048 1-284 (284)
205 cd06648 STKc_PAK_II Catalytic 100.0 5.8E-39 1.2E-43 346.9 28.1 256 759-1051 20-275 (285)
206 cd07836 STKc_Pho85 Catalytic d 100.0 3.8E-39 8.2E-44 343.9 26.3 254 759-1048 1-284 (284)
207 cd05052 PTKc_Abl Catalytic dom 100.0 7.1E-39 1.5E-43 340.1 28.2 254 756-1044 4-260 (263)
208 PHA03390 pk1 serine/threonine- 100.0 3.2E-39 7E-44 346.3 25.8 249 758-1050 14-267 (267)
209 cd08225 STKc_Nek5 Catalytic do 100.0 4.8E-39 1E-43 336.9 26.1 254 759-1048 1-257 (257)
210 PHA03211 serine/threonine kina 100.0 2.6E-39 5.7E-44 378.7 26.9 253 757-1050 168-460 (461)
211 KOG0586 Serine/threonine prote 100.0 4.2E-40 9.1E-45 383.3 19.9 261 753-1051 51-312 (596)
212 cd06606 STKc_MAPKKK Catalytic 100.0 1.2E-38 2.7E-43 329.9 28.8 257 759-1048 1-260 (260)
213 PLN00009 cyclin-dependent kina 100.0 4.2E-39 9.1E-44 347.1 26.3 261 757-1052 1-291 (294)
214 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-39 2.5E-44 354.6 22.1 257 758-1051 22-278 (292)
215 cd05093 PTKc_TrkB Catalytic do 100.0 8E-39 1.7E-43 345.2 28.0 257 756-1045 3-278 (288)
216 cd06659 STKc_PAK6 Catalytic do 100.0 2E-39 4.4E-44 353.5 23.6 255 760-1051 23-277 (297)
217 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.1E-38 2.4E-43 336.0 28.4 255 758-1044 2-263 (267)
218 cd06917 STKc_NAK1_like Catalyt 100.0 3.8E-39 8.1E-44 343.4 25.0 256 759-1052 2-262 (277)
219 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-38 2.9E-43 331.5 28.4 254 759-1048 1-254 (254)
220 cd07843 STKc_CDC2L1 Catalytic 100.0 3.8E-39 8.2E-44 347.3 25.0 257 757-1048 4-293 (293)
221 cd05090 PTKc_Ror1 Catalytic do 100.0 1.1E-38 2.3E-43 342.2 28.4 256 756-1043 3-280 (283)
222 PTZ00266 NIMA-related protein 100.0 3.5E-39 7.6E-44 400.1 28.3 263 753-1052 8-302 (1021)
223 cd07831 STKc_MOK Catalytic dom 100.0 5.1E-39 1.1E-43 341.8 25.6 251 760-1048 1-282 (282)
224 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.6E-38 3.5E-43 337.5 29.3 259 758-1048 2-264 (264)
225 cd05122 PKc_STE Catalytic doma 100.0 1.9E-38 4.2E-43 327.2 29.0 252 759-1047 1-253 (253)
226 cd08229 STKc_Nek7 Catalytic do 100.0 4.2E-39 9.2E-44 340.5 24.5 254 758-1043 2-262 (267)
227 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.8E-40 1.7E-44 349.9 19.0 256 759-1052 5-260 (277)
228 cd07865 STKc_CDK9 Catalytic do 100.0 8.9E-39 1.9E-43 344.5 27.2 262 756-1048 10-310 (310)
229 cd06641 STKc_MST3 Catalytic do 100.0 8.6E-39 1.9E-43 342.5 26.8 255 759-1051 5-259 (277)
230 cd05104 PTKc_Kit Catalytic dom 100.0 5.4E-39 1.2E-43 363.7 26.4 258 755-1043 32-371 (375)
231 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-38 3.2E-43 338.1 28.0 256 755-1042 3-274 (277)
232 cd05062 PTKc_IGF-1R Catalytic 100.0 1.3E-38 2.9E-43 340.4 27.8 254 756-1044 4-273 (277)
233 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.5E-39 9.8E-44 346.4 24.1 256 757-1048 4-291 (291)
234 cd07842 STKc_CDK8_like Catalyt 100.0 6.9E-39 1.5E-43 346.9 25.6 259 759-1048 1-316 (316)
235 KOG4236 Serine/threonine prote 100.0 1.9E-40 4.2E-45 377.0 14.0 257 764-1058 570-833 (888)
236 cd05088 PTKc_Tie2 Catalytic do 100.0 9.2E-39 2E-43 348.7 26.5 254 754-1045 3-276 (303)
237 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-38 3.3E-43 335.6 27.2 247 757-1039 3-251 (256)
238 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.5E-38 5.5E-43 341.1 29.4 257 758-1051 1-272 (287)
239 cd06616 PKc_MKK4 Catalytic dom 100.0 5.9E-39 1.3E-43 344.3 24.2 263 757-1056 3-278 (288)
240 cd07849 STKc_ERK1_2_like Catal 100.0 5.5E-39 1.2E-43 355.3 24.6 260 758-1051 5-298 (336)
241 cd05072 PTKc_Lyn Catalytic dom 100.0 1.9E-38 4.1E-43 335.1 27.5 254 755-1044 3-259 (261)
242 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-38 2.3E-43 342.7 25.9 262 756-1054 17-279 (286)
243 cd07858 STKc_TEY_MAPK_plant Ca 100.0 5.6E-39 1.2E-43 355.9 24.2 259 758-1051 5-297 (337)
244 cd08530 STKc_CNK2-like Catalyt 100.0 2E-38 4.3E-43 331.4 26.8 252 759-1048 1-256 (256)
245 cd05116 PTKc_Syk Catalytic dom 100.0 2.1E-38 4.5E-43 335.4 27.3 250 765-1045 2-254 (257)
246 cd00192 PTKc Catalytic domain 100.0 1.8E-38 4E-43 330.5 26.3 247 764-1045 1-260 (262)
247 cd05051 PTKc_DDR Catalytic dom 100.0 2.2E-38 4.7E-43 340.7 27.4 256 756-1041 3-292 (296)
248 cd06647 STKc_PAK_I Catalytic d 100.0 8.6E-39 1.9E-43 347.4 24.4 257 757-1051 18-275 (293)
249 cd07855 STKc_ERK5 Catalytic do 100.0 4.2E-39 9E-44 356.0 22.1 263 758-1051 5-300 (334)
250 cd06607 STKc_TAO Catalytic dom 100.0 1.6E-38 3.5E-43 346.4 26.1 256 757-1051 14-273 (307)
251 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.1E-38 6.8E-43 338.2 27.8 255 756-1045 4-274 (277)
252 cd05091 PTKc_Ror2 Catalytic do 100.0 1E-38 2.2E-43 341.7 23.4 254 756-1044 3-278 (283)
253 PHA03210 serine/threonine kina 100.0 5.9E-39 1.3E-43 378.1 23.6 269 755-1056 145-465 (501)
254 cd05084 PTKc_Fes Catalytic dom 100.0 2.7E-38 5.9E-43 332.3 26.0 247 765-1043 2-250 (252)
255 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-38 2.6E-43 336.1 23.4 252 757-1044 5-259 (261)
256 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.9E-38 6.3E-43 352.0 27.8 256 757-1051 14-304 (343)
257 cd05035 PTKc_Axl_like Catalyti 100.0 4E-38 8.6E-43 332.8 27.1 252 760-1042 1-268 (273)
258 KOG0574 STE20-like serine/thre 100.0 3.4E-41 7.3E-46 365.0 3.7 258 757-1052 32-290 (502)
259 KOG4279 Serine/threonine prote 100.0 2.8E-39 6E-44 375.3 19.7 249 765-1051 582-838 (1226)
260 cd07838 STKc_CDK4_6_like Catal 100.0 3.4E-38 7.3E-43 335.7 26.5 253 760-1048 1-287 (287)
261 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-38 3E-43 340.1 23.6 254 760-1048 1-283 (283)
262 cd07834 STKc_MAPK Catalytic do 100.0 7.8E-39 1.7E-43 351.1 21.8 261 759-1051 1-295 (330)
263 cd05053 PTKc_FGFR Catalytic do 100.0 4E-38 8.6E-43 338.8 26.3 257 754-1045 8-287 (293)
264 cd05050 PTKc_Musk Catalytic do 100.0 5.5E-38 1.2E-42 337.5 27.2 257 756-1044 3-287 (288)
265 cd05082 PTKc_Csk Catalytic dom 100.0 6.7E-38 1.5E-42 330.7 27.2 247 756-1044 4-254 (256)
266 cd05092 PTKc_TrkA Catalytic do 100.0 5.2E-38 1.1E-42 337.5 26.8 255 756-1043 3-278 (280)
267 cd05094 PTKc_TrkC Catalytic do 100.0 6.8E-38 1.5E-42 338.4 27.7 256 756-1044 3-280 (291)
268 cd05108 PTKc_EGFR Catalytic do 100.0 4.7E-38 1E-42 344.6 26.6 255 755-1045 4-264 (316)
269 cd05075 PTKc_Axl Catalytic dom 100.0 6.9E-38 1.5E-42 332.2 27.0 253 760-1043 1-268 (272)
270 cd05033 PTKc_EphR Catalytic do 100.0 9.2E-38 2E-42 331.5 27.9 255 757-1043 3-262 (266)
271 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.7E-38 1.7E-42 332.0 27.2 249 757-1044 3-253 (256)
272 cd05109 PTKc_HER2 Catalytic do 100.0 9.9E-38 2.1E-42 334.1 28.0 253 755-1043 4-262 (279)
273 cd05089 PTKc_Tie1 Catalytic do 100.0 7.1E-38 1.5E-42 339.8 27.0 247 758-1039 2-268 (297)
274 cd05046 PTK_CCK4 Pseudokinase 100.0 7E-38 1.5E-42 333.3 26.4 253 757-1044 4-271 (275)
275 cd05068 PTKc_Frk_like Catalyti 100.0 9E-38 1.9E-42 330.7 27.1 253 756-1044 4-259 (261)
276 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.7E-38 1.7E-42 331.0 26.2 251 756-1043 4-257 (260)
277 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.6E-37 3.5E-42 329.3 28.7 257 756-1043 3-264 (268)
278 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-37 2.6E-42 329.0 27.6 249 764-1044 1-253 (257)
279 cd07866 STKc_BUR1 Catalytic do 100.0 5.3E-38 1.1E-42 338.6 25.4 268 757-1048 7-311 (311)
280 cd08226 PK_STRAD_beta Pseudoki 100.0 2E-38 4.3E-43 349.8 22.5 261 764-1051 4-314 (328)
281 cd05071 PTKc_Src Catalytic dom 100.0 9.4E-38 2E-42 332.5 26.8 252 756-1044 4-258 (262)
282 cd05059 PTKc_Tec_like Catalyti 100.0 6.1E-38 1.3E-42 331.6 25.0 249 757-1044 3-253 (256)
283 cd07879 STKc_p38delta_MAPK13 C 100.0 3.7E-38 8.1E-43 350.5 24.4 255 758-1052 15-304 (342)
284 cd05066 PTKc_EphR_A Catalytic 100.0 1.4E-37 3.1E-42 330.8 27.4 257 757-1044 3-264 (267)
285 cd06633 STKc_TAO3 Catalytic do 100.0 1.5E-37 3.2E-42 341.3 28.3 255 759-1052 22-280 (313)
286 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.1E-38 1.5E-42 359.7 26.9 259 755-1044 34-395 (400)
287 cd05039 PTKc_Csk_like Catalyti 100.0 1.8E-37 3.9E-42 326.8 27.7 247 756-1043 4-253 (256)
288 PTZ00024 cyclin-dependent prot 100.0 6.1E-38 1.3E-42 345.9 25.0 274 758-1051 8-319 (335)
289 cd05115 PTKc_Zap-70 Catalytic 100.0 2.3E-37 4.9E-42 329.2 28.4 252 765-1048 2-257 (257)
290 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.2E-37 2.6E-42 347.3 27.6 256 757-1051 16-306 (345)
291 cd07857 STKc_MPK1 Catalytic do 100.0 1.1E-37 2.4E-42 344.4 27.0 261 759-1050 1-297 (332)
292 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-37 3.2E-42 341.4 27.6 255 758-1051 25-283 (317)
293 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-37 2.3E-42 337.6 25.8 257 757-1043 4-293 (295)
294 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.9E-37 4E-42 328.1 27.0 251 756-1043 4-257 (260)
295 cd07851 STKc_p38 Catalytic dom 100.0 5.4E-38 1.2E-42 349.4 24.0 256 757-1051 14-304 (343)
296 cd05034 PTKc_Src_like Catalyti 100.0 2.6E-37 5.7E-42 325.8 28.0 254 755-1044 3-259 (261)
297 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-37 5.3E-42 338.6 28.7 257 755-1043 9-290 (314)
298 cd05054 PTKc_VEGFR Catalytic d 100.0 5.1E-38 1.1E-42 350.5 23.7 255 757-1045 6-329 (337)
299 cd08222 STKc_Nek11 Catalytic d 100.0 7.3E-38 1.6E-42 330.5 23.5 254 759-1048 1-260 (260)
300 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.7E-37 3.8E-42 338.3 27.1 253 755-1039 15-292 (307)
301 PRK13184 pknD serine/threonine 100.0 1.4E-37 3.1E-42 384.3 29.8 266 757-1035 1-278 (932)
302 cd07840 STKc_CDK9_like Catalyt 100.0 1.2E-37 2.5E-42 330.9 25.1 255 760-1048 1-287 (287)
303 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-37 2.4E-42 346.8 25.9 259 758-1051 5-306 (342)
304 cd05055 PTKc_PDGFR Catalytic d 100.0 1.8E-37 3.9E-42 338.9 27.1 258 754-1042 31-297 (302)
305 cd05118 STKc_CMGC Catalytic do 100.0 8.6E-38 1.9E-42 332.0 23.6 254 760-1048 1-283 (283)
306 cd05045 PTKc_RET Catalytic dom 100.0 2.9E-37 6.3E-42 332.8 27.8 253 759-1043 1-283 (290)
307 cd05069 PTKc_Yes Catalytic dom 100.0 3.7E-37 8.1E-42 326.4 28.0 251 757-1044 5-258 (260)
308 cd06657 STKc_PAK4 Catalytic do 100.0 8.9E-38 1.9E-42 340.3 23.8 255 760-1051 22-276 (292)
309 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-37 3.3E-42 335.0 25.0 260 755-1048 4-302 (302)
310 cd05065 PTKc_EphR_B Catalytic 100.0 3.9E-37 8.4E-42 327.2 27.6 255 757-1040 3-262 (269)
311 cd06618 PKc_MKK7 Catalytic dom 100.0 2.2E-37 4.8E-42 335.2 26.2 261 754-1051 11-279 (296)
312 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-37 2.5E-42 330.8 23.5 254 760-1048 1-282 (282)
313 KOG0577 Serine/threonine prote 100.0 5E-39 1.1E-43 369.3 13.6 253 759-1050 27-283 (948)
314 cd05040 PTKc_Ack_like Catalyti 100.0 3.5E-37 7.5E-42 324.2 26.5 249 764-1043 1-255 (257)
315 smart00219 TyrKc Tyrosine kina 100.0 3.8E-37 8.2E-42 321.4 26.3 249 760-1044 1-256 (258)
316 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.9E-37 6.2E-42 335.6 26.4 254 754-1039 11-289 (304)
317 cd05095 PTKc_DDR2 Catalytic do 100.0 4.8E-37 1E-41 332.6 28.0 258 757-1044 4-295 (296)
318 cd05111 PTK_HER3 Pseudokinase 100.0 5.4E-37 1.2E-41 330.1 27.8 252 755-1039 4-261 (279)
319 cd05047 PTKc_Tie Catalytic dom 100.0 5.3E-37 1.2E-41 327.5 27.2 240 765-1039 2-261 (270)
320 cd05042 PTKc_Aatyk Catalytic d 100.0 5.5E-37 1.2E-41 326.0 27.0 250 765-1045 2-269 (269)
321 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5.7E-37 1.2E-41 328.8 27.3 255 758-1043 3-278 (283)
322 cd08216 PK_STRAD Pseudokinase 100.0 2.7E-37 5.8E-42 336.1 24.9 260 765-1051 5-301 (314)
323 cd06634 STKc_TAO2 Catalytic do 100.0 3E-37 6.5E-42 337.6 25.5 255 758-1051 15-273 (308)
324 cd05112 PTKc_Itk Catalytic dom 100.0 8E-37 1.7E-41 321.3 27.5 249 757-1044 3-253 (256)
325 cd05576 STKc_RPK118_like Catal 100.0 1.2E-37 2.7E-42 328.0 21.2 232 769-1048 4-237 (237)
326 KOG4645 MAPKKK (MAP kinase kin 100.0 1.3E-39 2.8E-44 399.0 6.9 259 759-1049 1236-1498(1509)
327 KOG0596 Dual specificity; seri 100.0 3.8E-38 8.3E-43 362.1 18.2 260 755-1051 358-633 (677)
328 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-36 2.7E-41 325.6 28.4 251 756-1039 5-261 (279)
329 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.7E-37 1E-41 340.8 25.8 257 756-1051 8-294 (328)
330 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-36 2.9E-41 322.1 28.1 253 755-1044 3-258 (260)
331 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-37 3.2E-42 343.6 21.5 265 756-1051 5-301 (337)
332 cd05056 PTKc_FAK Catalytic dom 100.0 1.1E-36 2.4E-41 323.8 27.3 251 756-1040 4-259 (270)
333 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-36 3.1E-41 318.3 27.7 242 765-1040 2-245 (250)
334 cd07830 STKc_MAK_like Catalyti 100.0 3.8E-37 8.2E-42 328.4 23.6 252 760-1048 1-283 (283)
335 cd05100 PTKc_FGFR3 Catalytic d 100.0 9.2E-37 2E-41 337.4 27.5 256 755-1045 9-289 (334)
336 KOG4721 Serine/threonine prote 100.0 1.8E-38 3.9E-43 363.7 13.9 239 760-1045 126-364 (904)
337 cd05044 PTKc_c-ros Catalytic d 100.0 5.7E-37 1.2E-41 324.7 24.4 248 765-1044 2-268 (269)
338 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-36 3.4E-41 324.4 27.9 257 755-1043 3-273 (280)
339 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-36 2.9E-41 318.7 26.9 244 764-1043 1-246 (251)
340 cd05083 PTKc_Chk Catalytic dom 100.0 8.9E-37 1.9E-41 321.8 25.6 246 756-1044 4-252 (254)
341 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.2E-36 4.8E-41 323.9 28.2 254 758-1042 4-279 (284)
342 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.6E-37 1.2E-41 341.7 24.3 255 756-1045 5-335 (343)
343 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.1E-36 4.4E-41 322.3 27.3 250 764-1044 1-268 (269)
344 KOG1989 ARK protein kinase fam 100.0 1.6E-37 3.4E-42 373.2 20.9 254 755-1037 34-302 (738)
345 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-36 4.1E-41 319.5 25.6 250 764-1043 1-256 (262)
346 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-36 3.8E-41 325.8 25.6 252 759-1044 5-278 (284)
347 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.5E-37 9.8E-42 326.0 20.2 236 765-1044 2-255 (258)
348 KOG0197 Tyrosine kinases [Sign 100.0 4E-37 8.7E-42 354.6 20.8 253 757-1045 205-460 (468)
349 KOG0584 Serine/threonine prote 100.0 1.3E-37 2.7E-42 363.1 16.6 253 761-1051 43-302 (632)
350 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.9E-36 4.2E-41 348.2 26.1 257 754-1041 33-394 (401)
351 KOG0603 Ribosomal protein S6 k 100.0 3.9E-37 8.4E-42 360.1 19.6 244 756-1048 320-566 (612)
352 cd08528 STKc_Nek10 Catalytic d 100.0 5.4E-36 1.2E-40 317.8 26.7 251 759-1041 1-265 (269)
353 PF07714 Pkinase_Tyr: Protein 100.0 2.1E-36 4.6E-41 323.2 23.5 247 761-1039 2-255 (259)
354 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.5E-36 9.8E-41 318.9 25.2 258 757-1044 3-281 (284)
355 cd05110 PTKc_HER4 Catalytic do 100.0 6.7E-36 1.5E-40 325.8 26.7 252 755-1039 4-261 (303)
356 cd05074 PTKc_Tyro3 Catalytic d 100.0 8.9E-36 1.9E-40 316.2 26.3 253 760-1043 1-269 (273)
357 PHA02882 putative serine/threo 100.0 7.9E-36 1.7E-40 324.9 26.2 261 754-1042 8-292 (294)
358 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.2E-36 1.8E-40 318.7 25.5 237 765-1045 2-260 (262)
359 KOG0983 Mitogen-activated prot 100.0 5.1E-37 1.1E-41 330.4 16.2 261 754-1051 88-355 (391)
360 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 5.2E-36 1.1E-40 314.4 23.4 232 764-1038 1-253 (259)
361 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.5E-36 1.6E-40 321.5 23.8 237 765-1045 2-272 (274)
362 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.2E-35 4.7E-40 315.4 25.9 248 765-1043 2-266 (268)
363 KOG0662 Cyclin-dependent kinas 100.0 5.7E-37 1.2E-41 314.7 12.3 259 758-1051 2-289 (292)
364 KOG1035 eIF-2alpha kinase GCN2 100.0 1.1E-36 2.5E-41 372.0 16.4 274 756-1049 477-875 (1351)
365 KOG0193 Serine/threonine prote 100.0 3.4E-36 7.4E-41 349.4 17.8 255 754-1041 388-648 (678)
366 KOG0671 LAMMER dual specificit 100.0 9.1E-37 2E-41 340.3 12.3 258 753-1051 84-412 (415)
367 KOG0194 Protein tyrosine kinas 100.0 1.4E-35 3.1E-40 345.1 20.8 256 758-1044 157-418 (474)
368 smart00220 S_TKc Serine/Threon 100.0 1.4E-34 3.1E-39 295.4 24.5 243 770-1048 1-244 (244)
369 KOG2345 Serine/threonine prote 100.0 3.7E-36 8E-41 321.0 12.6 264 754-1045 17-296 (302)
370 KOG1187 Serine/threonine prote 100.0 4.6E-35 1E-39 333.7 22.1 254 756-1043 73-349 (361)
371 KOG0666 Cyclin C-dependent kin 100.0 7.7E-36 1.7E-40 325.5 12.2 263 757-1051 23-343 (438)
372 KOG1290 Serine/threonine prote 100.0 2.7E-34 5.8E-39 327.1 21.9 153 735-892 54-222 (590)
373 PLN03225 Serine/threonine-prot 100.0 4.9E-34 1.1E-38 341.9 25.0 262 754-1056 128-461 (566)
374 KOG1026 Nerve growth factor re 100.0 1.1E-34 2.3E-39 348.0 18.8 260 754-1045 482-761 (774)
375 KOG4250 TANK binding protein k 100.0 1.1E-34 2.5E-39 341.7 17.2 253 758-1044 13-312 (732)
376 KOG0587 Traf2- and Nck-interac 100.0 7.6E-34 1.6E-38 339.5 19.6 257 758-1051 19-288 (953)
377 KOG1151 Tousled-like protein k 100.0 1.1E-34 2.5E-39 325.4 10.9 269 755-1050 460-746 (775)
378 KOG0670 U4/U6-associated splic 100.0 6.8E-35 1.5E-39 332.6 8.5 263 748-1050 422-751 (752)
379 KOG0669 Cyclin T-dependent kin 100.0 2.2E-35 4.7E-40 315.0 4.1 263 757-1050 16-320 (376)
380 KOG1113 cAMP-dependent protein 100.0 4.7E-35 1E-39 323.5 3.8 187 494-700 95-292 (368)
381 PLN03224 probable serine/threo 100.0 2.2E-32 4.8E-37 323.4 26.4 265 753-1050 140-505 (507)
382 KOG1095 Protein tyrosine kinas 100.0 1.1E-32 2.3E-37 340.1 24.2 250 755-1037 689-952 (1025)
383 KOG0665 Jun-N-terminal kinase 100.0 1.3E-33 2.9E-38 309.7 13.4 256 755-1049 14-314 (369)
384 KOG1006 Mitogen-activated prot 100.0 8.9E-34 1.9E-38 304.8 6.3 261 754-1051 60-333 (361)
385 KOG0603 Ribosomal protein S6 k 100.0 7.3E-34 1.6E-38 332.7 5.7 274 765-1082 1-283 (612)
386 KOG0668 Casein kinase II, alph 100.0 8.2E-33 1.8E-37 292.4 11.9 253 756-1051 36-328 (338)
387 PLN00113 leucine-rich repeat r 100.0 6.9E-32 1.5E-36 338.5 20.4 240 759-1043 691-948 (968)
388 KOG0664 Nemo-like MAPK-related 100.0 3.3E-33 7.2E-38 300.4 6.7 260 759-1052 54-350 (449)
389 KOG0606 Microtubule-associated 100.0 3.5E-32 7.6E-37 330.1 12.2 268 756-1078 81-349 (1205)
390 KOG1027 Serine/threonine prote 100.0 1.8E-31 4E-36 318.1 12.7 250 760-1050 511-772 (903)
391 KOG1152 Signal transduction se 100.0 2.4E-31 5.1E-36 306.9 12.0 205 754-990 557-771 (772)
392 KOG1094 Discoidin domain recep 100.0 1.7E-30 3.6E-35 300.0 18.6 254 755-1039 535-797 (807)
393 KOG4278 Protein tyrosine kinas 100.0 1.2E-30 2.5E-35 301.1 17.1 257 758-1049 267-526 (1157)
394 KOG0196 Tyrosine kinase, EPH ( 100.0 7.2E-31 1.6E-35 310.4 15.1 252 754-1039 625-884 (996)
395 KOG4257 Focal adhesion tyrosin 100.0 1.4E-30 2.9E-35 301.7 16.7 250 760-1044 391-647 (974)
396 KOG0199 ACK and related non-re 100.0 1.2E-30 2.6E-35 305.1 16.1 254 754-1039 106-365 (1039)
397 KOG0576 Mitogen-activated prot 100.0 1.2E-31 2.6E-36 313.2 7.4 260 756-1051 13-277 (829)
398 cd00180 PKc Catalytic domain o 100.0 6.5E-29 1.4E-33 245.7 23.9 212 766-1046 1-215 (215)
399 smart00221 STYKc Protein kinas 100.0 5E-29 1.1E-33 254.1 22.9 214 760-1004 1-218 (225)
400 KOG1167 Serine/threonine prote 100.0 6E-30 1.3E-34 288.8 13.3 286 756-1052 34-388 (418)
401 KOG0200 Fibroblast/platelet-de 100.0 4.7E-28 1E-32 292.7 24.1 254 758-1044 296-577 (609)
402 KOG0984 Mitogen-activated prot 100.0 5.9E-29 1.3E-33 260.6 13.2 218 754-1005 42-270 (282)
403 KOG2052 Activin A type IB rece 100.0 5E-28 1.1E-32 274.3 18.0 249 752-1036 205-493 (513)
404 KOG3653 Transforming growth fa 100.0 4.6E-28 9.9E-33 276.1 17.7 248 756-1041 208-498 (534)
405 COG0515 SPS1 Serine/threonine 100.0 2.7E-26 5.8E-31 235.3 27.4 259 760-1049 2-279 (384)
406 KOG1025 Epidermal growth facto 100.0 5.9E-28 1.3E-32 286.4 16.3 246 759-1037 697-948 (1177)
407 PLN00181 protein SPA1-RELATED; 100.0 2.6E-28 5.6E-33 302.2 13.8 229 815-1051 29-271 (793)
408 KOG1345 Serine/threonine kinas 99.9 1.6E-27 3.4E-32 257.3 8.8 254 757-1048 23-290 (378)
409 smart00750 KIND kinase non-cat 99.9 4.9E-26 1.1E-30 228.5 12.4 161 843-1049 1-169 (176)
410 KOG0590 Checkpoint kinase and 99.9 4.2E-26 9.1E-31 275.1 6.5 262 761-1052 321-592 (601)
411 KOG1164 Casein kinase (serine/ 99.9 3.7E-23 8.1E-28 231.2 23.7 259 759-1042 19-293 (322)
412 PRK09188 serine/threonine prot 99.9 5.4E-24 1.2E-28 243.4 16.3 178 752-962 12-194 (365)
413 KOG1024 Receptor-like protein 99.9 3.9E-23 8.5E-28 231.4 16.6 257 755-1043 281-552 (563)
414 KOG1165 Casein kinase (serine/ 99.9 1.2E-22 2.6E-27 224.5 17.0 252 755-1035 25-288 (449)
415 KOG1163 Casein kinase (serine/ 99.9 1.3E-22 2.9E-27 216.8 14.6 277 754-1059 11-304 (341)
416 cd05147 RIO1_euk RIO kinase fa 99.9 8.6E-22 1.9E-26 206.0 10.9 141 763-907 2-166 (190)
417 cd05145 RIO1_like RIO kinase f 99.8 7.7E-21 1.7E-25 197.4 14.8 141 763-907 2-166 (190)
418 PRK10359 lipopolysaccharide co 99.8 7.4E-21 1.6E-25 205.7 13.7 175 755-982 28-216 (232)
419 PF14531 Kinase-like: Kinase-l 99.8 2E-20 4.3E-25 207.9 16.2 234 759-1033 13-288 (288)
420 PRK12274 serine/threonine prot 99.8 1.3E-19 2.8E-24 193.8 16.0 203 760-992 4-211 (218)
421 KOG4158 BRPK/PTEN-induced prot 99.8 6.8E-20 1.5E-24 206.1 12.8 274 753-1053 152-521 (598)
422 KOG1240 Protein kinase contain 99.8 2.7E-20 5.8E-25 227.5 9.8 244 759-1045 24-291 (1431)
423 PRK10345 hypothetical protein; 99.8 9E-19 2E-23 187.0 14.5 136 762-906 6-157 (210)
424 PRK14879 serine/threonine prot 99.8 3.4E-18 7.3E-23 177.6 14.6 137 764-907 2-143 (211)
425 KOG1166 Mitotic checkpoint ser 99.8 1.7E-18 3.7E-23 215.1 13.3 202 750-986 690-901 (974)
426 smart00090 RIO RIO-like kinase 99.8 2.9E-18 6.2E-23 185.6 12.9 144 759-907 29-197 (237)
427 KOG0590 Checkpoint kinase and 99.7 2.3E-19 5E-24 217.0 -0.5 263 757-1050 19-291 (601)
428 TIGR03724 arch_bud32 Kae1-asso 99.7 2.7E-17 5.8E-22 169.7 13.9 133 765-907 1-138 (199)
429 KOG0195 Integrin-linked kinase 99.7 1.2E-17 2.7E-22 181.0 9.0 250 754-1042 186-442 (448)
430 cd05144 RIO2_C RIO kinase fami 99.7 4.3E-17 9.2E-22 169.7 11.6 137 760-907 17-174 (198)
431 PRK09605 bifunctional UGMP fam 99.7 1.6E-16 3.5E-21 189.9 14.3 139 758-907 333-476 (535)
432 cd05119 RIO RIO kinase family, 99.7 1.8E-16 4E-21 161.7 11.5 137 763-907 2-163 (187)
433 KOG1033 eIF-2alpha kinase PEK/ 99.7 6.6E-17 1.4E-21 188.2 6.9 252 759-1048 245-515 (516)
434 cd05120 APH_ChoK_like Aminogly 99.6 3E-15 6.4E-20 142.8 12.4 132 762-907 2-138 (155)
435 PRK01723 3-deoxy-D-manno-octul 99.6 6.8E-15 1.5E-19 159.6 14.8 137 764-907 37-191 (239)
436 KOG1023 Natriuretic peptide re 99.6 1.6E-14 3.6E-19 170.1 13.1 207 812-1046 1-224 (484)
437 KOG0601 Cyclin-dependent kinas 99.4 4.7E-13 1E-17 158.4 7.3 266 755-1053 111-387 (524)
438 PRK04750 ubiB putative ubiquin 99.4 4.7E-13 1E-17 160.5 6.4 144 757-908 119-314 (537)
439 TIGR01982 UbiB 2-polyprenylphe 99.3 7E-12 1.5E-16 147.4 13.1 138 764-907 123-306 (437)
440 cd05151 ChoK Choline Kinase (C 99.3 4.9E-12 1.1E-16 126.6 9.8 128 763-907 3-136 (170)
441 KOG1243 Protein kinase [Genera 99.3 6.2E-11 1.3E-15 142.2 16.7 183 760-984 15-199 (690)
442 cd05146 RIO3_euk RIO kinase fa 99.3 3.9E-11 8.5E-16 127.7 13.4 139 764-907 3-173 (197)
443 KOG0601 Cyclin-dependent kinas 99.2 5.8E-12 1.3E-16 149.3 6.4 251 755-1048 262-517 (524)
444 KOG1266 Protein kinase [Signal 99.1 9.5E-11 2.1E-15 131.1 6.4 250 773-1057 81-343 (458)
445 cd05154 ACAD10_11_like Acyl-Co 99.1 5.1E-10 1.1E-14 115.9 11.5 140 764-907 4-206 (223)
446 COG3642 Mn2+-dependent serine/ 99.1 1E-09 2.2E-14 115.9 11.9 133 765-907 3-140 (204)
447 KOG3087 Serine/threonine prote 98.9 8.3E-09 1.8E-13 109.0 12.7 144 762-907 11-165 (229)
448 PF01163 RIO1: RIO1 family; I 98.8 4.6E-08 1E-12 103.7 11.6 127 773-907 1-155 (188)
449 KOG1113 cAMP-dependent protein 98.7 4.3E-09 9.2E-14 118.7 2.3 83 551-642 260-347 (368)
450 KOG3741 Poly(A) ribonuclease s 98.7 3.3E-07 7.1E-12 108.3 16.2 217 771-1051 289-530 (655)
451 KOG2137 Protein kinase [Signal 98.7 1.3E-08 2.8E-13 123.0 4.8 168 866-1057 107-277 (700)
452 PRK15123 lipopolysaccharide co 98.7 2.1E-07 4.6E-12 103.6 13.7 126 782-907 44-194 (268)
453 PF06293 Kdo: Lipopolysacchari 98.5 5.3E-07 1.1E-11 96.0 11.7 105 803-907 56-170 (206)
454 KOG0614 cGMP-dependent protein 98.5 8.8E-08 1.9E-12 112.1 5.0 78 558-643 299-386 (732)
455 PF00027 cNMP_binding: Cyclic 98.4 2.8E-08 6E-13 89.2 -0.7 79 557-643 2-88 (91)
456 COG0664 Crp cAMP-binding prote 98.4 1.3E-07 2.9E-12 97.2 4.1 83 553-643 22-112 (214)
457 COG4248 Uncharacterized protei 98.4 2.2E-06 4.7E-11 99.5 12.7 231 763-1037 16-291 (637)
458 KOG0576 Mitogen-activated prot 98.3 6.6E-08 1.4E-12 116.0 -1.0 243 759-1051 243-490 (829)
459 COG0478 RIO-like serine/threon 98.3 1.6E-06 3.4E-11 96.7 9.6 137 760-906 93-250 (304)
460 PLN03192 Voltage-dependent pot 98.2 8.8E-07 1.9E-11 112.1 4.6 102 557-666 400-508 (823)
461 PF06176 WaaY: Lipopolysacchar 98.2 2E-05 4.4E-10 86.0 13.8 141 755-906 28-182 (229)
462 PF01636 APH: Phosphotransfera 98.1 6E-05 1.3E-09 78.3 15.1 138 763-907 2-197 (239)
463 PRK09902 hypothetical protein; 98.1 2.4E-05 5.1E-10 85.0 11.9 139 767-907 27-179 (216)
464 COG1718 RIO1 Serine/threonine 98.1 2.5E-05 5.5E-10 86.4 12.2 138 763-907 53-215 (268)
465 cd00038 CAP_ED effector domain 98.0 2.7E-06 6E-11 78.0 3.1 81 557-645 20-108 (115)
466 KOG1035 eIF-2alpha kinase GCN2 98.0 2.5E-05 5.4E-10 99.6 11.9 205 801-1051 225-440 (1351)
467 TIGR02172 Fb_sc_TIGR02172 Fibr 98.0 5.7E-05 1.2E-09 82.1 12.6 134 764-907 7-182 (226)
468 COG0661 AarF Predicted unusual 97.9 4.5E-05 9.7E-10 92.3 11.5 138 764-907 131-314 (517)
469 cd05150 APH Aminoglycoside 3'- 97.9 0.0001 2.2E-09 79.5 12.3 134 766-907 6-193 (244)
470 PRK10402 DNA-binding transcrip 97.9 9.3E-06 2E-10 87.3 3.5 84 554-645 31-122 (226)
471 PF13095 FTA2: Kinetochore Sim 97.8 0.00032 7E-09 75.9 15.0 128 758-905 37-206 (207)
472 PRK09392 ftrB transcriptional 97.8 1.4E-05 3.1E-10 85.9 4.2 83 556-646 32-121 (236)
473 PRK11753 DNA-binding transcrip 97.8 1.1E-05 2.5E-10 84.6 3.2 80 556-643 22-110 (211)
474 KOG1826 Ras GTPase activating 97.8 5.6E-06 1.2E-10 106.6 0.1 253 757-1049 1228-1496(2724)
475 PLN02876 acyl-CoA dehydrogenas 97.7 0.00035 7.6E-09 89.0 14.8 145 762-908 42-258 (822)
476 smart00100 cNMP Cyclic nucleot 97.7 2.1E-05 4.6E-10 72.2 2.8 81 557-645 20-110 (120)
477 TIGR03697 NtcA_cyano global ni 97.7 2.3E-05 5E-10 81.0 3.2 77 562-646 1-87 (193)
478 PRK13918 CRP/FNR family transc 97.6 3.8E-05 8.3E-10 80.3 3.2 74 553-626 5-87 (202)
479 KOG0498 K+-channel ERG and rel 97.6 3.2E-05 6.9E-10 96.0 2.8 71 556-626 444-523 (727)
480 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0011 2.3E-08 71.5 13.8 133 764-904 7-169 (199)
481 cd05155 APH_ChoK_like_1 Unchar 97.5 0.00046 1E-08 74.5 10.6 74 763-846 2-82 (235)
482 KOG1235 Predicted unusual prot 97.5 0.00057 1.2E-08 83.0 11.3 137 764-907 167-354 (538)
483 PRK09391 fixK transcriptional 97.5 8.6E-05 1.9E-09 80.3 3.9 83 555-645 39-126 (230)
484 COG2112 Predicted Ser/Thr prot 97.3 0.00079 1.7E-08 71.8 9.1 130 760-907 24-155 (201)
485 cd05157 ETNK_euk Ethanolamine 97.2 0.002 4.4E-08 68.9 11.0 137 763-907 3-201 (235)
486 PF12260 PIP49_C: Protein-kina 97.1 0.0017 3.8E-08 69.1 8.6 98 806-907 7-111 (188)
487 PRK10593 hypothetical protein; 96.9 0.0095 2.1E-07 67.5 13.1 78 761-845 17-100 (297)
488 PRK09550 mtnK methylthioribose 96.9 0.015 3.2E-07 69.0 14.5 80 763-844 31-117 (401)
489 PLN02868 acyl-CoA thioesterase 96.9 0.00054 1.2E-08 80.7 2.7 71 555-626 32-108 (413)
490 PRK11161 fumarate/nitrate redu 96.8 0.0008 1.7E-08 72.3 3.3 77 558-642 41-124 (235)
491 cd05156 ChoK_euk Choline Kinas 96.8 0.0065 1.4E-07 67.8 10.6 76 763-846 3-85 (302)
492 TIGR02721 ycfN_thiK thiamine k 96.7 0.0097 2.1E-07 65.0 10.5 132 766-907 4-175 (256)
493 cd05153 HomoserineK_II Homoser 96.7 0.017 3.7E-07 64.1 12.5 138 762-907 18-205 (296)
494 PRK05231 homoserine kinase; Pr 96.6 0.034 7.4E-07 62.6 14.2 31 877-907 187-217 (319)
495 TIGR00938 thrB_alt homoserine 96.5 0.03 6.4E-07 63.1 13.3 141 760-907 24-217 (307)
496 KOG2270 Serine/threonine prote 96.5 0.019 4.1E-07 67.3 11.3 141 762-907 148-313 (520)
497 KOG2268 Serine/threonine prote 96.3 0.0037 8E-08 72.0 4.7 136 760-906 94-250 (465)
498 KOG0499 Cyclic nucleotide-gate 96.1 0.0031 6.7E-08 75.9 2.9 70 557-626 553-631 (815)
499 TIGR01767 MTRK 5-methylthiorib 95.9 0.047 1E-06 64.1 11.0 76 765-842 2-84 (370)
500 PLN02236 choline kinase 95.9 0.05 1.1E-06 63.0 11.1 137 763-907 41-231 (344)
No 1
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-84 Score=730.00 Aligned_cols=484 Identities=30% Similarity=0.501 Sum_probs=422.6
Q ss_pred ccccCCCcccccccccCCCCCcceeecCCcEEEEEcCccccccCCCCCchHhhhh---hhcccccccCCCcccccCCchh
Q 001057 553 DDLNLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDLNVLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTPRTSQ 629 (1170)
Q Consensus 553 ~~~~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~~~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ldR~~~ 629 (1170)
|.-.+..++|+.|||||+.|+++||+++|+++|+.+|+.|.+|++|+.|||||++ +|+|||.|+|+|++|+|||
T Consensus 176 ~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~~g~ll~~m~~gtvFGELAILynctRtAsV~alt~~~lWaidR--- 252 (732)
T KOG0614|consen 176 CMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSREGKLLGKMGAGTVFGELAILYNCTRTASVRALTDVRLWAIDR--- 252 (732)
T ss_pred hhCcccccCCcEEEecCCCCceEEEeecceEEEeeCCeeeeccCCchhhhHHHHHhCCcchhhhhhhhhhhHHHHHH---
Confidence 4444667899999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhhhhhhhhccCCCHHHHHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH------HHhccccCcEEeeeehhh---
Q 001057 630 IELLVNGHRTITELQNPQQIKKLLDVSRSIASVNDCDYNSLEHMLDRLEELKY------IIQDRKVDALFVETFGRR--- 700 (1170)
Q Consensus 630 ~~~~~~tfr~Il~~~~~~kr~~y~~fl~~V~~l~~l~~~el~klADaLe~~~f------IiqgekgD~FyI~~~G~R--- 700 (1170)
++|+.|+|.+...+++.|..||++||+|.+|++.-|+||||.|+...| |++|++||.||||..|+.
T Consensus 253 -----~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vt 327 (732)
T KOG0614|consen 253 -----EVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVT 327 (732)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEe
Confidence 999999999999999999999999999999999999999999999999 677899999999999974
Q ss_pred -----------HHHHHHHhHh---------------------hccccccccccccccccccccCCCcc-hhhcc--cc-C
Q 001057 701 -----------IEKLLQEKYV---------------------NLCGQIDDEKLDSSNAMTEEESSMDE-DTVRS--LR-T 744 (1170)
Q Consensus 701 -----------IeKl~rek~v---------------------~ic~qlddEkl~Ss~~~~eeess~de-e~v~s--l~-~ 744 (1170)
+.-+.+-+|+ ..|..+|.+.+.+.....++-.+.+- +.... .. .
T Consensus 328 q~~e~~~q~~~lr~l~kGd~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~l~ek~~~D~~r~A~~~~~ 407 (732)
T KOG0614|consen 328 QQDEGSTQPQELRTLNKGDYFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEELKEKDYGDEERRASVVIK 407 (732)
T ss_pred ecCCCCCchhHHhhccccchhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHHhhhhhccchhhhhhhHHH
Confidence 2222233333 24445555555443332222111110 00000 00 0
Q ss_pred CCCCCCCCCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 001057 745 SPINPCSKDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFF 824 (1170)
Q Consensus 745 sp~~p~~~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~ 824 (1170)
..+ .....++.+.+++.+..||-||||.|=+++.+.....+|+|+++|..+.+..+.+++..|.+||..+++|+||+||
T Consensus 408 ~~~-~~e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLY 486 (732)
T KOG0614|consen 408 EDF-AEEFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLY 486 (732)
T ss_pred HHH-HhhhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHH
Confidence 000 0012356778899999999999999999998776667999999999999999999999999999999999999999
Q ss_pred eeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 825 YSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 825 ~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
-.|.+..++||+||-|-||+|+..|+..+.|.+..+++|++.+++|++|||++|||||||||+|+||+.+|.+||.|||+
T Consensus 487 rTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 487 RTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred HHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhC
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 984 (1170)
|+.. ..+.++.++||||.|.|||++++++++.++|+||||+++||||+|
T Consensus 567 AKki-------------------------------~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G 615 (732)
T KOG0614|consen 567 AKKI-------------------------------GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTG 615 (732)
T ss_pred HHHh-------------------------------ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcC
Confidence 9964 224567899999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChhhhhhc-
Q 001057 985 IPPFNAKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWDTLARQ- 1059 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe~L~~~- 1059 (1170)
.|||.+.+++.+|+.|+++- +.|| ..++..+.+||++++..+|.+|++ ..++.||.+|.||.+.||+.|..+
T Consensus 616 ~pPFs~~dpmktYn~ILkGid~i~~P---r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~ 692 (732)
T KOG0614|consen 616 SPPFSGVDPMKTYNLILKGIDKIEFP---RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRT 692 (732)
T ss_pred CCCCCCCchHHHHHHHHhhhhhhhcc---cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhcc
Confidence 99999999999999999864 4444 789999999999999999999999 789999999999999999999887
Q ss_pred -cCCCCCCCCC-CCCCcccccc
Q 001057 1060 -KAMFIPAAES-LDTSYFVSRY 1079 (1170)
Q Consensus 1060 -~ppfiP~~~s-lDts~F~s~~ 1079 (1170)
.||++|.+.+ .|++||+...
T Consensus 693 L~pPi~~~va~ptD~s~Fd~~p 714 (732)
T KOG0614|consen 693 LPPPIIPSVANPTDVSNFDNFP 714 (732)
T ss_pred CCCCccccCCCcccchhccCCC
Confidence 7899999888 8999999853
No 2
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.1e-77 Score=720.06 Aligned_cols=1033 Identities=35% Similarity=0.425 Sum_probs=789.8
Q ss_pred ceeeeeccCCcceecccccCCCCccccccccCCCCccchhhhhcccccccccCCC----cc-----ccCCCCCCCCccCC
Q 001057 67 SILVASSLGLNHIRTKSVSSSPSPLRFFSAAGTPSSFTNEAKKNKTETAAADVKP----KF-----AVPPSNKPPSLESG 137 (1170)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~~~~~ 137 (1170)
++.+.+..|+||||++|- .++.+++|..---|-.-|.- |-||..-.+....+ -| +-+--|.+|---.+
T Consensus 76 s~~~p~e~df~~Iklisn-gAygavylvrh~~trqrfa~--kiNkq~lilRnilt~a~npfvvgDc~tllk~~g~lPvdm 152 (1205)
T KOG0606|consen 76 SRRAPSESDFNTIKLISN-GAYGAVYLVRHKETRQRFAM--KINKQNLILRNILTFAGNPFVVGDCATLLKNIGPLPVDM 152 (1205)
T ss_pred cccCCCccccceeEeecc-CCCCceeeeeccccccchhh--cccccchhhhccccccCCcceechhhhhcccCCCCcchh
Confidence 489999999999999985 46777888766666666655 55554333322221 12 22223433333334
Q ss_pred -CCccccccccccCCCCCCccccccHHHHHhhccChhhhhHHhhccccccccccccccccccccCCCccccccccccCCC
Q 001057 138 -KKGQWTQSKSLRFPSPLNPELEVSHAAFAKEMQSPRFQAILRVTSGRKKKAPEIKSFSHELNSKGVRPFPVWKSRAFGH 216 (1170)
Q Consensus 138 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1170)
.+-+|-++....-+.--++.|++.+..-+|..+..+++.+|+.+.. .+++-.|++|+||++.|||...|.+....+++
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at-nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVil 231 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT-NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVIL 231 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc-hhhhcchHHHHHHhhhccccCCccccChhhhh
Confidence 7889999999999999999999999999999999999999999988 89999999999999999999999999999999
Q ss_pred hH--------HHHHHHHHHhHhhhhhhccc-----ccccchhhhhhhhccCCCChhhhhhHhHHHHHHHHhhccCcccee
Q 001057 217 ME--------EIMVAIRAKFDKLKEEVNCD-----LGVLAGDLVGILEKSSDSHPEWQESLEDLLVIARKCATMSPSEFW 283 (1170)
Q Consensus 217 ~~--------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (1170)
++ +.||.|+.+|..-++=|+.| +|++++|.|-..|+..-.-||-|+.+++||..+..|..|.++.||
T Consensus 232 rqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~e 311 (1205)
T KOG0606|consen 232 RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALE 311 (1205)
T ss_pred hhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhh
Confidence 99 99999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred EEeeeeeeecccc---cccCchhhHHHHHHHHHHHhHhhhhhhhhhhhccCcccccccccccccCCCchhhhh----hhh
Q 001057 284 VKCEGIVLNLDDR---RQELPMGILKQAYTRLLFILTRCTRLVQFQKESGYEEEHILGLHQLSDLGVYPEQIL----QIR 356 (1170)
Q Consensus 284 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 356 (1170)
|+|++||+-||.- ||+++++-+++++.+++||+|||+|.+||.+|.++++|++++.||.+...+++.|.. +.-
T Consensus 312 vk~h~ff~~LDw~~llRqkaefvpql~~eddtsyfdTRs~Ryh~~~se~~~~ees~~~~~qFsscs~r~~kv~ss~~~l~ 391 (1205)
T KOG0606|consen 312 VKQHGFFQLLDWKSLLRQKAEFVPQLESEDDTSYFDTRSDRYHHFESEDTGDEESSLEFRQFSSCSPRFSKVYSSWESLA 391 (1205)
T ss_pred hhhccceeecccchhhhhhccccccccccccchhhcccchheeeccccCCccccccccccccccccccccccccchhhhh
Confidence 9999999999999 999999999999999999999999999999999999999999999999999876642 111
Q ss_pred ccCCcccCCCCcccchhhhhhccccccccCCcchhhh-hcccc----ccccccccccCCCCCcccccccccccCCCCccC
Q 001057 357 QQDFSGPLTGGKVMNEKQRKKSHGQELGSLNLKEDQV-DQHET----ENVEVGTAKSGDSTTSSYRMSSWKRLPSGSRRK 431 (1170)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (1170)
++. +. -+ -++.-+++++-... + ...|. +|... ..++..++-+..++. .+++.|+.+++.--..
T Consensus 392 ~~~--t~--~~---~~~~~~~~~~~~~~--~-~~g~k~~~~~~sp~~~kl~~st~~ss~s~~--~~~s~~~~~~~~~s~~ 459 (1205)
T KOG0606|consen 392 QLE--TA--TP---REKSSQSSQGEVSP--S-SAGQKDSWKSNSPESSKLELSTALSSVSPN--HPGSPSKSLTSAASTL 459 (1205)
T ss_pred ccc--cc--cc---cccccccccccccC--C-ccccccccccCChhhhhccccchhhhcccc--cCCCccccccchhhhh
Confidence 111 11 00 01112222222221 1 22333 35443 445556655555555 7999999998765432
Q ss_pred cccccccCCCCCChhhhhccCCCCcccC----CCCCCCcCccc-----ccccccc----cccccccc-------Ccccee
Q 001057 432 KGSEAAADTPPKDKTEAFQNKDEPKIGS----DDGNDNLDGLY-----HHASSRI----TKSWGFWG-------ENSMIC 491 (1170)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-----~~~~~~~----~~~~~~~~-------~~~~~~ 491 (1170)
. ...... .-++|+++.|...- -..-+..+... -.-++++ .--|++|+ .+++||
T Consensus 460 ~-~~~~~s------~~~~ds~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~~~~d~s~~~~~~r~~~~~v~~~d~~i~ 532 (1205)
T KOG0606|consen 460 R-TALRTS------SPSEDSKIFPLRAPPPPSSYASEEPESPKPKFSVSPESGQPGDDSEALDRSRLWSKCVGTSDSGIC 532 (1205)
T ss_pred c-cccccC------CCCCCccccccCCCCCccccccCCCCCCCcccccCCCCCCcccchhhhccccccccccccCCcccc
Confidence 2 222111 23355555554211 11111122111 0001111 12377774 789999
Q ss_pred eccccccceeeecccccccccccccccCCcchhHHHHHHHHHHHHHhcccCCCc-cCc--------ccccccccCCCccc
Q 001057 492 RICEVEIPVVHVEEHSRICTIADRCDLKSLTVNERLERVAETLEKILDSWSPKK-HTK--------KRTHDDLNLMSPKQ 562 (1170)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~k~ 562 (1170)
||||.++|++|+|+|++||+++++|+.+++.++.|+.+|.+-++++..||+..- .+- .+=..++-..+++.
T Consensus 533 ~~~e~~~p~~~~e~~~~~~~~~~ks~~~s~e~~~~~~kv~ks~s~~alS~~i~s~~~~~~~~l~s~lS~~~~sS~p~Srd 612 (1205)
T KOG0606|consen 533 RICEAEGPRLHSENHSRICKHQAKSELNSIEVKSRLRKVNKSLSASALSLMINSSDTPTGGPLCSPLSPRSLSSNPSSRD 612 (1205)
T ss_pred cccccccccccccCcchHHHhhhhcccCccccccchhhHHHHHHhhhcccccccccCCcccccccccCCCCCCCCcccCc
Confidence 999999999999999999999999999999999999999999999999999854 111 11112222333477
Q ss_pred ccccccCCCCCcceeecCCcEEEEEcCccccccCCCCCchHhhhh-hh-----------cccccccCCCcccccCCchhh
Q 001057 563 NSLSRQGSKEMLDHVPDDDNAFVIEDLNVLPEISCDKNPTAADIA-AK-----------TSSAGSLTPRSPLLTPRTSQI 630 (1170)
Q Consensus 563 ~~~~~QGd~Gd~fYVie~G~~~v~~~~~~v~~~~~g~sFGELAL~-pR-----------AATv~A~t~~~lw~ldR~~~~ 630 (1170)
+.|+|.+.+++.-... ...+--. |..|| +-++ .| --.|.++++.++--..|.+|-
T Consensus 613 sspsrd~s~~~~~~~p---pI~i~~~---------~~~yG-ft~~airVy~Gd~d~ytvhh~v~sv~egsPA~~agls~~ 679 (1205)
T KOG0606|consen 613 SSPSRDSSAAMLSLRP---PITIHFS---------GKKYG-FTLRAIRVYMGDKDVYTVHHSVGSVEEGSPAFEAGLSAG 679 (1205)
T ss_pred cccccccchhhcCcCC---ceeeecc---------ccccC-ceeeeEEEecCCcccceeeeeeeeecCCCCccccCCCcc
Confidence 7888888877765544 1222222 22233 1111 11 145678888888888999999
Q ss_pred hhhhhhhhhhccCCCHHHHHHHHH--HhhccccCCCCCHHHHHHHHHHHHHHHHHHhccccCcEEeeeeh-hhHHHHHHH
Q 001057 631 ELLVNGHRTITELQNPQQIKKLLD--VSRSIASVNDCDYNSLEHMLDRLEELKYIIQDRKVDALFVETFG-RRIEKLLQE 707 (1170)
Q Consensus 631 ~~~~~tfr~Il~~~~~~kr~~y~~--fl~~V~~l~~l~~~el~klADaLe~~~fIiqgekgD~FyI~~~G-~RIeKl~re 707 (1170)
||+.-.--.++.+-...+...+.. --+.+..+..|..-.+..........+.+.+..+-...-.+++| +++.+++++
T Consensus 680 DlIthvnge~v~gl~H~ev~~Lll~~gn~v~~~ttplenTSik~g~arr~~~k~~m~~R~kk~~~~E~~~~rr~~kLlr~ 759 (1205)
T KOG0606|consen 680 DLITHVNGEPVHGLVHTEVMELLLKSGNKVTLRTTPLENTSIKSGPARRDSYKAVMARRKKKALVPETFGIRRIEKLLRK 759 (1205)
T ss_pred ceeEeccCcccchhhHHHHHHHHHhcCCeeEEEeeccccchhhhhHHHHHHHHHHHhhcccccccccccccccHHHHHHH
Confidence 998776667777766666655554 33445556667777788888888888888888888899999999 899999999
Q ss_pred hHhhccccccccccccccccccccCCCcchhhccccCCCCCCCCCCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEE
Q 001057 708 KYVNLCGQIDDEKLDSSNAMTEEESSMDEDTVRSLRTSPINPCSKDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFA 787 (1170)
Q Consensus 708 k~v~ic~qlddEkl~Ss~~~~eeess~dee~v~sl~~sp~~p~~~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VA 787 (1170)
.+...|.-+.++... ....++...+....+...+..+.. .....+.+.+++.+-.|+++.++.+.-..+|...+
T Consensus 760 ~~~q~~~l~~~~~s~-----~ss~eS~pgdp~~sls~sP~sp~~-yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~ 833 (1205)
T KOG0606|consen 760 ISKQDCELLHTSRSF-----LSSSESLPGDPTRSLSASPRSPTK-YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRP 833 (1205)
T ss_pred HHhhhhhhhcccccc-----ccccccCCCCcccccccCCCCccc-ccCCCccceecccccCCCCcccccCCccccccccc
Confidence 998877766554432 222334444445566655665554 56788899999999999999999999999999999
Q ss_pred EEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHH
Q 001057 788 IKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAEL 867 (1170)
Q Consensus 788 IKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQI 867 (1170)
+|+..+.........+....+.+++....||.++..+..|.....++|||+|++|++|...+++.+..+++.++.++..+
T Consensus 834 ~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~ 913 (1205)
T KOG0606|consen 834 SKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILER 913 (1205)
T ss_pred hhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHH
Confidence 99988877777777778888888887788999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcc-ccccccCCCCC-CCCCCCCCccccccccCCCCCccccccc
Q 001057 868 VLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSK-VGLIHSTDDLS-APSLGSGGFLVNDELKDQPPLTREQRQK 945 (1170)
Q Consensus 868 L~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk-~~~~~~~~d~~-a~sl~s~~~l~~~~l~~~~~lt~~~~~~ 945 (1170)
.++++|||...++|||++|.|+|+..+|+.+++|||... ...+....+.. ..+.+....+.......... ....+..
T Consensus 914 vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~-~~~~~~~ 992 (1205)
T KOG0606|consen 914 VQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLS-ADEARRK 992 (1205)
T ss_pred HhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccc-cchhhcc
Confidence 999999999999999999999999999999999999544 33222222221 01100001111111111111 1123456
Q ss_pred ccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHh
Q 001057 946 HSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKL 1025 (1170)
Q Consensus 946 ~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkL 1025 (1170)
....||+.|.+||.+.+..++..+|||++|++++|.++|.+||....++.++++|.+...+||..+...+.++++++.++
T Consensus 993 ~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~l 1072 (1205)
T KOG0606|consen 993 HAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRL 1072 (1205)
T ss_pred ccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhh
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC-CCCCccccccccCCCCccccCCCCCccccCCCCCC
Q 001057 1026 LTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES-LDTSYFVSRYVWNPEDENVQGGSDFDDLTDTCSSG 1104 (1170)
Q Consensus 1026 Lq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s-lDts~F~s~~~~~pede~v~~~~~f~d~~d~~~~G 1104 (1170)
|..+|.+|.++.++.++..||||+.++|+.|..+..+|+|...+ .|++||.+.|.|.+.++.+.....+.+..+.+...
T Consensus 1073 l~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l~~q~~~~~p~~~s~~dtS~~~~r~~~~~~~e~~sg~s~~~~~~s~~~~~ 1152 (1205)
T KOG0606|consen 1073 LTEEPTQRLGAKGAAEVKGHPFFQDVDWENLALQKAEFVPQPESTQDTSYFESRFSEESQDETVSGSSSGSKLDSPDESP 1152 (1205)
T ss_pred hccCchhccCcccccccccCCccCCCCccccccccCccCCCCCCCCccchhhcccccccccccccCCCcccCccCccccc
Confidence 99999999999889999999999999999999999999999986 89999999999998888888777776665555432
Q ss_pred CCCCCcChhhHhhhcccccccccccccccccCCceeecCCcccccchHHHHh
Q 001057 1105 SFSNTLDEEQADECGSLAEFSAPALAVQYSFSNFSFKNLSQLASINYDLVVK 1156 (1170)
Q Consensus 1105 s~s~~~~e~~~~~~~~~~e~~~~~~~~~y~fs~f~~~~~~~~~~~~~~~~~~ 1156 (1170)
..... +...+.|+ .-+|.||++.|.+++.|++|+.+.+
T Consensus 1153 ~~~~p--e~~~~~~~------------~~sl~~~~~k~~s~l~s~~p~~~l~ 1190 (1205)
T KOG0606|consen 1153 ECTTP--ELKPAMCG------------NLSLINFSFKNLSQLASINPDKLLQ 1190 (1205)
T ss_pred cccCc--cccCCcCc------------cccccccCccChhhccccChHhhcC
Confidence 22211 01122333 2229999999999999999999877
No 3
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.7e-69 Score=620.00 Aligned_cols=375 Identities=44% Similarity=0.728 Sum_probs=310.0
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.+..++|+++++||+|+||.||+|+.+.||++||||+++|+.+...+++++++.|++||...++|+||+||++|++.+++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||||++|||+.++|.+.+.|+++.+++|+++++.||+.||++|||||||||+|+|||..||+||+|||||+.......
T Consensus 217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~ 296 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHR 296 (550)
T ss_pred EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999964432111
Q ss_pred CCC------CCCCCCCCCcccccccc-------------CCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 914 DDL------SAPSLGSGGFLVNDELK-------------DQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 914 ~d~------~a~sl~s~~~l~~~~l~-------------~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
.+. ....+.. ....+... ...+...+....++++|||.||||||+.+.+|+..+|||||
T Consensus 297 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 297 IESYRLDEQMQINLSE--AKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhcchhhhhhhhcc--CCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 110 0001100 00000000 01111233445678999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 975 GIILFELLIGIPPFNAKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 975 GVILYELLTG~pPF~g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
||||||||.|+|||.+.++.+++++|+++. +.||. ...++.+++|||.+||+ ||.+|++..+++||++||||++++
T Consensus 375 G~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~-~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE-EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 999999999999999999999999999987 66664 35688999999999999 999999999999999999999999
Q ss_pred hhhhhhccCCCCCCCCC-CCCCccccccccCCCCccccCCCCCccccCCCCCCCCCCCcChhhHhhhccccccccccccc
Q 001057 1053 WDTLARQKAMFIPAAES-LDTSYFVSRYVWNPEDENVQGGSDFDDLTDTCSSGSFSNTLDEEQADECGSLAEFSAPALAV 1131 (1170)
Q Consensus 1053 we~L~~~~ppfiP~~~s-lDts~F~s~~~~~pede~v~~~~~f~d~~d~~~~Gs~s~~~~e~~~~~~~~~~e~~~~~~~~ 1131 (1170)
|+.|....|||+|.+.+ .|++||+.. ++..........+..+. .+....... ..+....++
T Consensus 453 W~~l~~~~apfvP~v~~~~DT~yFddF----------------~e~~~~~~~~~~~~~~~-k~~~~~~~~-~~~~~~~Fv 514 (550)
T KOG0605|consen 453 WDHLREMPAPFVPQVNSELDTQYFDDF----------------PEEDSMTPTADKSGPSR-KMLSMVDTN-NSSKDINFV 514 (550)
T ss_pred cchhhcCCCCCCCCCCCcccccccccC----------------cccccCcccccccccch-hhhhccccc-CCccccccc
Confidence 99999999999999999 999999842 22122222222222222 111111111 224556799
Q ss_pred ccccCCceeecCCcccccc
Q 001057 1132 QYSFSNFSFKNLSQLASIN 1150 (1170)
Q Consensus 1132 ~y~fs~f~~~~~~~~~~~~ 1150 (1170)
+|+|.+|.+++..+.+.++
T Consensus 515 gfTyk~~~~~~~~~~~~~~ 533 (550)
T KOG0605|consen 515 GFTYKNFDGLNKANSLLIN 533 (550)
T ss_pred ceeeecccccccccccccc
Confidence 9999999999999998877
No 4
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-64 Score=561.75 Aligned_cols=298 Identities=49% Similarity=0.895 Sum_probs=278.3
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
....++|+++++||+|+||+||+++.+.|++.||||+++|..+.....+.++.+|+.||..++||+||++++.||+.+++
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|||+||+.||+|+.+|++.+.|+++.+++|+++|+.||.|||++|||||||||||||||.+||++|+|||||+...
T Consensus 101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~---- 176 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL---- 176 (357)
T ss_pred EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998521
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
..+..+.++|||+.|||||++.+.+|+.++||||||+++||||+|.+||.+.+.
T Consensus 177 --------------------------~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~ 230 (357)
T KOG0598|consen 177 --------------------------KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV 230 (357)
T ss_pred --------------------------cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH
Confidence 123345679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC-hhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG-ATGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES- 1069 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS-a~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s- 1069 (1170)
..++++|..++...+ +..++.++++||+++|..||.+|++ ..++.+|.+||||.+++|+.+..+ .|||+|...+
T Consensus 231 ~~~~~~I~~~k~~~~--p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l~PpF~P~~~~~ 308 (357)
T KOG0598|consen 231 KKMYDKILKGKLPLP--PGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKLSPPFKPNVTGL 308 (357)
T ss_pred HHHHHHHhcCcCCCC--CccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCCCCCeecCCCCc
Confidence 999999999985544 3569999999999999999999997 457999999999999999999887 7899999888
Q ss_pred CCCCccccccccCC
Q 001057 1070 LDTSYFVSRYVWNP 1083 (1170)
Q Consensus 1070 lDts~F~s~~~~~p 1083 (1170)
.++++|+.+|+...
T Consensus 309 ~~~~~Fd~eft~~~ 322 (357)
T KOG0598|consen 309 EDTSNFDNEFTSYT 322 (357)
T ss_pred cccccccHHHHhcc
Confidence 89999999887543
No 5
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-62 Score=529.94 Aligned_cols=288 Identities=43% Similarity=0.842 Sum_probs=272.7
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
..+++|+.++.||.|+||+|.+++++.+|.+||+|++.+..+.+..+++++.+|..||+.+.||++++|++.|.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|||||++||.|+.++++.++|++..+++|++||+.||+|||+++|+||||||||||||.+|++||+|||+|+..
T Consensus 121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v------ 194 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRV------ 194 (355)
T ss_pred EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEe------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999953
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
...+.+.||||.|+|||++...+|+.++|||||||++|||+.|.+||.+.++.
T Consensus 195 ---------------------------~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~ 247 (355)
T KOG0616|consen 195 ---------------------------SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI 247 (355)
T ss_pred ---------------------------cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH
Confidence 12367899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCC-CC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWDTLARQ--KAMFIPAA-ES 1069 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~-~s 1069 (1170)
.+|++|+.+++.|| ..++.++++||+++|+.|-.+|.+ .+|..+|+.||||++++|+.+..+ ++|++|.. ..
T Consensus 248 ~iY~KI~~~~v~fP---~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~r~ie~P~~pp~~~~ 324 (355)
T KOG0616|consen 248 QIYEKILEGKVKFP---SYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQRKIEPPFEPPNIHG 324 (355)
T ss_pred HHHHHHHhCcccCC---cccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhhccccCCCCCccccC
Confidence 99999999999988 689999999999999999999987 458999999999999999999887 78888833 22
Q ss_pred -CCCCccccc
Q 001057 1070 -LDTSYFVSR 1078 (1170)
Q Consensus 1070 -lDts~F~s~ 1078 (1170)
.|+++|+..
T Consensus 325 ~gdtsnfd~y 334 (355)
T KOG0616|consen 325 PGDTSNFDDY 334 (355)
T ss_pred Cccccccccc
Confidence 788888864
No 6
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-60 Score=557.77 Aligned_cols=295 Identities=39% Similarity=0.799 Sum_probs=275.9
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRE 831 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~ 831 (1170)
..+.+++|.++++||+|+||+|+++..+.++++||||+++|..+.....++..+.|..|+.... ||++++||.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 4678899999999999999999999999999999999999999999999999999999998776 999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
++|+||||+.||||+ ++...+.|++..+++|+++|+.||.|||++||||||||.+|||||.+|++||+|||+|+...
T Consensus 443 ~l~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m-- 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM-- 519 (694)
T ss_pred eEEEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC--
Confidence 999999999999944 44455789999999999999999999999999999999999999999999999999999632
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
..+..+.++||||.|||||++.+..|+.++|||||||+|||||.|+.||.|+
T Consensus 520 ----------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd 571 (694)
T KOG0694|consen 520 ----------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD 571 (694)
T ss_pred ----------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 1233667899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCC
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAA 1067 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~ 1067 (1170)
+.+++++.|++....+| ..+|.++.+++++||.+||++|+++ .++.+|+.||||+.|+|+.|..+ +|||+|..
T Consensus 572 dEee~FdsI~~d~~~yP---~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~i 648 (694)
T KOG0694|consen 572 DEEEVFDSIVNDEVRYP---RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPTI 648 (694)
T ss_pred CHHHHHHHHhcCCCCCC---CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCccc
Confidence 99999999999998877 7899999999999999999999995 57999999999999999999987 89999999
Q ss_pred CC-CCCCcccccccc
Q 001057 1068 ES-LDTSYFVSRYVW 1081 (1170)
Q Consensus 1068 ~s-lDts~F~s~~~~ 1081 (1170)
++ .|.+||+.+|+.
T Consensus 649 ~~~~D~snFd~eFt~ 663 (694)
T KOG0694|consen 649 KGPEDVSNFDEEFTS 663 (694)
T ss_pred CChhhhcccchhhhc
Confidence 98 899999998864
No 7
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-58 Score=497.82 Aligned_cols=299 Identities=41% Similarity=0.787 Sum_probs=282.9
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
...+.+++|+.+++||+|.||+|.+|+.+.+|++||||+++|..+..+..+.+.+.|-.+|...+||++..|.++|+..+
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d 241 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD 241 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
++|+||||.+||+|+.+|.+...|+++.+++|-++|+.||.|||+++||+||||.+|+|||.+|||||+|||||+...
T Consensus 242 rlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 242 RLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred eEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998531
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
..+..+.++||||.|+|||++....|+.++|||.+||+||||++|+.||+..
T Consensus 320 ----------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 320 ----------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ----------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 1234567899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCC
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWDTLARQ--KAMFIPAA 1067 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~ 1067 (1170)
+...+++.|+...+.|| ..++++++.|+..+|.+||.+|++ ..+|+||..|+||.+++|+....+ .|||+|++
T Consensus 372 dh~kLFeLIl~ed~kFP---r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~Kki~PPfKPqV 448 (516)
T KOG0690|consen 372 DHEKLFELILMEDLKFP---RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYRKKIEPPFKPQV 448 (516)
T ss_pred chhHHHHHHHhhhccCC---ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHHhccCCCCCCCc
Confidence 99999999999999988 689999999999999999999998 578999999999999999998776 79999999
Q ss_pred CC-CCCCccccccccCC
Q 001057 1068 ES-LDTSYFVSRYVWNP 1083 (1170)
Q Consensus 1068 ~s-lDts~F~s~~~~~p 1083 (1170)
.+ .|++||+.+|+..|
T Consensus 449 tSetDTryFD~EFT~q~ 465 (516)
T KOG0690|consen 449 TSETDTRYFDEEFTSQP 465 (516)
T ss_pred ccccchhhhhhhhhcce
Confidence 98 99999999987654
No 8
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-56 Score=502.75 Aligned_cols=317 Identities=39% Similarity=0.692 Sum_probs=273.7
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
...+.+++|++++.||.|.-|+||||+.+.++..+|||++.|..+...+...++..|.+||+.++||+++.||..|+.+.
T Consensus 71 ~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~ 150 (459)
T KOG0610|consen 71 DGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK 150 (459)
T ss_pred CCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc
Confidence 45677889999999999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..|+|||||+||+|..+++++ +.|++..+++|+++|+.||+|||-+||||||||||||||-++|||.|+||.|+....
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 999999999999999999875 579999999999999999999999999999999999999999999999999987653
Q ss_pred cccCCCCCC--------CCCC---CCCcccc----ccc--c-C------CCCC--cccccccccccCCCCCCchHHHhcC
Q 001057 910 IHSTDDLSA--------PSLG---SGGFLVN----DEL--K-D------QPPL--TREQRQKHSVAGTPDYLAPEILLGM 963 (1170)
Q Consensus 910 ~~~~~d~~a--------~sl~---s~~~l~~----~~l--~-~------~~~l--t~~~~~~~s~vGTp~YmAPEVL~g~ 963 (1170)
...+-.... +... .+.+... ... + + .+.+ .....+.++++||-+|+|||++.|.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 211110000 0000 1111111 000 0 0 0001 2334567899999999999999999
Q ss_pred CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC-hhhHHHH
Q 001057 964 GHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG-ATGAREV 1042 (1170)
Q Consensus 964 ~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS-a~~AeEI 1042 (1170)
+++.++|||+|||++||||.|..||.|.+..+++.+|+...+.||..+ .++..++|||++||.+||.+|++ ..||.||
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 999999999999999999999999999999999999999999999765 78999999999999999999998 5689999
Q ss_pred HcCCCCCCCChhhhhhccCCCCCCCCC
Q 001057 1043 KQHPFFKNINWDTLARQKAMFIPAAES 1069 (1170)
Q Consensus 1043 LqHPfF~~idwe~L~~~~ppfiP~~~s 1069 (1170)
++||||++++|..++...||+||....
T Consensus 390 K~HpFF~gVnWaLir~~~PP~iP~~~d 416 (459)
T KOG0610|consen 390 KRHPFFEGVNWALIRCARPPEIPKPVD 416 (459)
T ss_pred hcCccccCCChhheeccCCCcCCCccc
Confidence 999999999999888889999998754
No 9
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-57 Score=547.87 Aligned_cols=293 Identities=41% Similarity=0.753 Sum_probs=270.4
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
++..++|.++++||+|+||.|.+++++.|++.||||++.|..+........|..|++||...+.++||.|+++|++..++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 45668999999999999999999999999999999999998888888888999999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||||++||||..++.+.++++++.++||+++|+.||+.||+.|+|||||||+|||||..|||||+|||.|-...
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~---- 226 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD---- 226 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999886421
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
..+.......+|||.|++||+|.. ..|+..||||||||++||||+|..||
T Consensus 227 -------------------------~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF 281 (1317)
T KOG0612|consen 227 -------------------------ADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF 281 (1317)
T ss_pred -------------------------CCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence 012234456799999999999973 35899999999999999999999999
Q ss_pred CCCCHHHHHHHHhcc--CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCC
Q 001057 989 NAKTPQQIFDNIMNR--DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPA 1066 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~--~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~ 1066 (1170)
+.++..++|.+|++. .+.||.. ..+|.++++||.++|+ +|..|++.+|+++|..||||.+++|+.++...|||+|.
T Consensus 282 YadslveTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPe 359 (1317)
T KOG0612|consen 282 YADSLVETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPE 359 (1317)
T ss_pred hHHHHHHHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCc
Confidence 999999999999986 5777733 4699999999999999 99999999999999999999999999999999999999
Q ss_pred CCC-CCCCcccc
Q 001057 1067 AES-LDTSYFVS 1077 (1170)
Q Consensus 1067 ~~s-lDts~F~s 1077 (1170)
+.+ .||++|+-
T Consensus 360 vssd~DTsnFd~ 371 (1317)
T KOG0612|consen 360 VSSDDDTSNFDV 371 (1317)
T ss_pred CCCCCccccccc
Confidence 988 89999943
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-56 Score=509.61 Aligned_cols=286 Identities=39% Similarity=0.736 Sum_probs=259.3
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~ 832 (1170)
.....+|.+.+.||.|+|++|++|+++.+++.||||++.|..+.++..+..+..|.++|.+| .||+|++||..|+|...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 56778999999999999999999999999999999999999998998999999999999999 79999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+|+||+++|+|.++|++.+.|++..+++|++||+.||+|||++|||||||||||||||.||++||+|||.|+.+....
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999753111
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
... . +... . ........+++||..|.+||+|.....++.+|||+||||||.|+.|.+||.+.+
T Consensus 229 ~~~-------~-~~~~-------~--~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N 291 (604)
T KOG0592|consen 229 KSQ-------E-NPVD-------P--NQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN 291 (604)
T ss_pred ccc-------c-CccC-------c--ccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc
Confidence 100 0 0000 0 001112467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCC
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAM 1062 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~pp 1062 (1170)
.--++++|+.-.+.|| ..+++.++|||+++|..||.+|+| +.+|++||||.+++|+.|..+.||
T Consensus 292 eyliFqkI~~l~y~fp---~~fp~~a~dLv~KLLv~dp~~Rlt---~~qIk~HpFF~~Vdw~nlw~~~PP 355 (604)
T KOG0592|consen 292 EYLIFQKIQALDYEFP---EGFPEDARDLIKKLLVRDPSDRLT---SQQIKAHPFFEGVDWENLWQQTPP 355 (604)
T ss_pred HHHHHHHHHHhcccCC---CCCCHHHHHHHHHHHccCcccccc---HHHHhhCcccccCChhhhhhcCCC
Confidence 9999999999999888 689999999999999999999999 799999999999999999888654
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-55 Score=487.40 Aligned_cols=263 Identities=35% Similarity=0.598 Sum_probs=235.6
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHH----HHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKN----AVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~----~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
..+.|.+.+.||.|+||.|-+|..+.||+.||||++.+....... ....+.+|++||++|+|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 456799999999999999999999999999999999886654422 2345689999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC---CcEEEEecCCcccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD---GHIKLTDFGLSKVG 908 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d---G~VKLsDFGLAk~~ 908 (1170)
..||||||+.||+|++.+-.++.+.++..+.|++||+.||.|||++||+||||||+|||+..+ ..+||+|||+|+..
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~ 329 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS 329 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999876 68999999999963
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCC---CcchhhhHHHHHHHHHHhCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGH---GATADWWSVGIILFELLIGI 985 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~y---s~ksDIWSLGVILYELLTG~ 985 (1170)
.....+.+.||||.|.|||++.+.++ ..++|||||||+||-+|+|.
T Consensus 330 -------------------------------g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~ 378 (475)
T KOG0615|consen 330 -------------------------------GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY 378 (475)
T ss_pred -------------------------------ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC
Confidence 12345678999999999999998763 45789999999999999999
Q ss_pred CCCCCCCHHH-HHHHHhccCCCCC-CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 986 PPFNAKTPQQ-IFDNIMNRDIPWP-NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 986 pPF~g~~~~e-i~qkIl~~~l~fP-~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
+||.+..... +.++|..+.+.|- .....++.++.+||.+||..||++|++ +.|+|+||||+.++
T Consensus 379 pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s---~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 379 PPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPS---ADEALNHPWFKDAP 444 (475)
T ss_pred CCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcC---HHHHhcChhhhccc
Confidence 9999876655 8899999998765 344689999999999999999999999 88999999999775
No 12
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-53 Score=492.74 Aligned_cols=256 Identities=38% Similarity=0.664 Sum_probs=245.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
.+|...+.||+|||++||.+++..+|+.||+|++.+..+....+.+.+.+|++|.+.|+|||||++|++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|+|..++|..++++.+.++|.++++|++||+.||.|||+++|||||||..||||+.+.+|||+|||||..+
T Consensus 98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~l--------- 168 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQL--------- 168 (592)
T ss_pred EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeee---------
Confidence 99999999999999899999999999999999999999999999999999999999999999999999863
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.....+..+.||||.|+||||+...+++..+||||+||+||-||+|+|||...+..++|
T Consensus 169 ---------------------e~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety 227 (592)
T KOG0575|consen 169 ---------------------EYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETY 227 (592)
T ss_pred ---------------------cCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHH
Confidence 12345677899999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
.+|....+.+| ..+|.+|++||.+||+.||.+||+ +.+||.|+||.
T Consensus 228 ~~Ik~~~Y~~P---~~ls~~A~dLI~~lL~~~P~~Rps---l~~vL~h~Ff~ 273 (592)
T KOG0575|consen 228 NKIKLNEYSMP---SHLSAEAKDLIRKLLRPNPSERPS---LDEVLDHPFFK 273 (592)
T ss_pred HHHHhcCcccc---cccCHHHHHHHHHHhcCCcccCCC---HHHHhcCHhhh
Confidence 99999999887 589999999999999999999999 89999999993
No 13
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-53 Score=487.57 Aligned_cols=317 Identities=46% Similarity=0.753 Sum_probs=272.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
...-|..++.||-|+||.|.|++..+|...||+|.+.|.++..++++.+++.|++||...++++||+||+.|++++++|+
T Consensus 627 dKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 627 DKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred cccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEE
Confidence 33459999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||+|++||||..+|-+.+.|.|+.++||++++.+|+++.|..|+|||||||+|||||.+|||||+|||||.-+.. +.+
T Consensus 707 VMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW--THd 784 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW--THD 784 (1034)
T ss_pred EEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccccee--ccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999985321 111
Q ss_pred CCCCCCCCCCcccc------ccccCC----CCCc------ccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHH
Q 001057 916 LSAPSLGSGGFLVN------DELKDQ----PPLT------REQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILF 979 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~------~~l~~~----~~lt------~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 979 (1170)
. .+.+.|+..-- ++..+. ..+. ...-...+.+||+.|+|||||...+|+..|||||.|||||
T Consensus 785 s--kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 785 S--KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred c--ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 11111111100 000000 0011 1112346789999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhh
Q 001057 980 ELLIGIPPFNAKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLA 1057 (1170)
Q Consensus 980 ELLTG~pPF~g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~ 1057 (1170)
||+.|++||...++-+...+|.++. +.++. ..++|.++.+||.+|++ ++..|++..++++++.||||++|||..|+
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~-~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgIDfsslR 940 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPY-QGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGIDFSSLR 940 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhcccccc-ccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccccchHhhh
Confidence 9999999999999988888888765 33332 25899999999999888 99999999999999999999999999999
Q ss_pred hccCCCCCCCCC-CCCCccccc
Q 001057 1058 RQKAMFIPAAES-LDTSYFVSR 1078 (1170)
Q Consensus 1058 ~~~ppfiP~~~s-lDts~F~s~ 1078 (1170)
.+.++|||.+.. .|+++|+..
T Consensus 941 kq~ApYIP~ItHptDTSNFdpv 962 (1034)
T KOG0608|consen 941 KQRAPYIPRITHPTDTSNFDPV 962 (1034)
T ss_pred hccCCcCccccCCCccccCCcC
Confidence 999999999988 999999863
No 14
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-53 Score=471.05 Aligned_cols=299 Identities=38% Similarity=0.782 Sum_probs=276.9
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecc
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCR 830 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~ 830 (1170)
...+...+|..+.+||+|+||+|.+|..+.|.+.||||+++|..+.....++..+.|..+|.... -|++++|+.+|+.-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 34567789999999999999999999999999999999999999888888899999999998764 68999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
+.+|+||||+.||+|..+|+..+.|.+..+.+|+++|+.||-+||++||||||||.+||||+.+|||||+|||+|+...
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni- 501 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI- 501 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998532
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.....+.++||||.|+|||++...+|+.++||||+||+|||||.|++||.|
T Consensus 502 -----------------------------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 502 -----------------------------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred -----------------------------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 113346789999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCC
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPA 1066 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~ 1066 (1170)
.+.+++++.|+..+..+| ..+|.++.++++.+|.+.|.+|++. .+-.+|..||||+.|||+.++.. +|||.|.
T Consensus 553 eDE~elF~aI~ehnvsyP---KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~eiqPPfkPk 629 (683)
T KOG0696|consen 553 EDEDELFQAIMEHNVSYP---KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERREIQPPFKPK 629 (683)
T ss_pred CCHHHHHHHHHHccCcCc---ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhccCCCCCCCc
Confidence 999999999999999877 7899999999999999999999983 45689999999999999999887 8999999
Q ss_pred CCC-CCCCccccccccCC
Q 001057 1067 AES-LDTSYFVSRYVWNP 1083 (1170)
Q Consensus 1067 ~~s-lDts~F~s~~~~~p 1083 (1170)
++. -+.++|+..|+..+
T Consensus 630 ~k~~r~~eNFD~~Ft~~~ 647 (683)
T KOG0696|consen 630 IKCGRDAENFDKFFTREP 647 (683)
T ss_pred cccCCchhhhhHHHhcCC
Confidence 855 89999999887654
No 15
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-52 Score=468.12 Aligned_cols=290 Identities=36% Similarity=0.661 Sum_probs=261.1
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.+..+.|+..++||+||||.||-|+.+.||+.||+|.+.|..+..+......++|..||.+++.++||.|-++|++.+.+
T Consensus 181 pvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 181 PVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDAL 260 (591)
T ss_pred hccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCce
Confidence 45667899999999999999999999999999999999998887777788899999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
||||..|+||||..+|.+.+ .|++..+++|++||++||++||+.+||||||||+|||||+.|||+|+|+|||..+.
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~-- 338 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP-- 338 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC--
Confidence 99999999999999998876 79999999999999999999999999999999999999999999999999998531
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.+......+||.+|||||++.+..|+.++|||||||++|||+.|+.||...
T Consensus 339 -----------------------------~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 339 -----------------------------EGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred -----------------------------CCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 122334559999999999999999999999999999999999999999764
Q ss_pred C----HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCC
Q 001057 992 T----PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMF 1063 (1170)
Q Consensus 992 ~----~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppf 1063 (1170)
. .+++-+.+++....++ ..+|+++++|+..+|++||.+|++. .++.++.+||||++++|..+... .|||
T Consensus 390 KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPf 466 (591)
T KOG0986|consen 390 KEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPF 466 (591)
T ss_pred hhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCC
Confidence 3 3467777777777666 7899999999999999999999993 58999999999999999999987 8999
Q ss_pred CCCCCC------CCCCcccc
Q 001057 1064 IPAAES------LDTSYFVS 1077 (1170)
Q Consensus 1064 iP~~~s------lDts~F~s 1077 (1170)
+|.... +|+..|+.
T Consensus 467 iPdp~aVyakDv~DIeqFs~ 486 (591)
T KOG0986|consen 467 IPDPGAVYAKDVLDIEQFST 486 (591)
T ss_pred CCCccccchhhhhhhhhccc
Confidence 997644 56666654
No 16
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9.2e-50 Score=447.34 Aligned_cols=316 Identities=41% Similarity=0.732 Sum_probs=248.9
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+..|+.++..++||||+++++.|.+...+||||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998766555566678899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 99999999999998889999999999999999999999999999999999999999999999999999753211000000
Q ss_pred C---CCCCCCCcccc---ccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 918 A---PSLGSGGFLVN---DELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 918 a---~sl~s~~~l~~---~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
. .... ...... ........-..........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.
T Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~ 239 (363)
T cd05628 161 RNLNHSLP-SDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE 239 (363)
T ss_pred cccccccc-ccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence 0 0000 000000 00000000000111234568999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC
Q 001057 992 TPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES 1069 (1170)
Q Consensus 992 ~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s 1069 (1170)
+..+.+..+.... +.+|.. ..++.++++||.+||+ +|.+|++..++.||++||||++++|+.+....++..+...+
T Consensus 240 ~~~~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~ 317 (363)
T cd05628 240 TPQETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHIRERPAAIPIEIKS 317 (363)
T ss_pred CHHHHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHHHhCCCCCCccCCC
Confidence 9999999888643 444421 3578999999999887 78888766669999999999999999987764443332222
Q ss_pred -CCCCccc
Q 001057 1070 -LDTSYFV 1076 (1170)
Q Consensus 1070 -lDts~F~ 1076 (1170)
.++++|+
T Consensus 318 ~~~~~~~~ 325 (363)
T cd05628 318 IDDTSNFD 325 (363)
T ss_pred cchhhccC
Confidence 3444444
No 17
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.8e-50 Score=445.62 Aligned_cols=318 Identities=42% Similarity=0.748 Sum_probs=255.1
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||+||+|++..+|+.||||++.+...........+.+|+.+|..++||||++++++|.+.+++||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998765555566778889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++...........
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999753211000000
Q ss_pred ---CCCCCCCC----ccccccccCCCCC-cccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 918 ---APSLGSGG----FLVNDELKDQPPL-TREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 918 ---a~sl~s~~----~l~~~~l~~~~~l-t~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
........ ............+ ........+.+||+.|+|||++.+..++.++|||||||++|||++|.+||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 00000000 0000000000000 001112335689999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCC--CCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCC
Q 001057 990 AKTPQQIFDNIMNRDIP--WPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAA 1067 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~--fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~ 1067 (1170)
+.+..+.+..+...... +|. ...+++++++||.+||. +|.+|++...+.++++||||++++|+.+....++++|..
T Consensus 241 ~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
T cd05599 241 SDNPQETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHIRERPAPIIPEL 318 (364)
T ss_pred CCCHHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHhhcCCCCCCCC
Confidence 99988888888765432 332 13579999999999997 999999877799999999999999999888788888876
Q ss_pred CC-CCCCcccc
Q 001057 1068 ES-LDTSYFVS 1077 (1170)
Q Consensus 1068 ~s-lDts~F~s 1077 (1170)
.+ .+.++|+.
T Consensus 319 ~~~~~~~~~~~ 329 (364)
T cd05599 319 KSITDTSNFDD 329 (364)
T ss_pred CCchhhhhccc
Confidence 55 55566653
No 18
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.7e-50 Score=432.95 Aligned_cols=284 Identities=40% Similarity=0.804 Sum_probs=249.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||.||+|+++.+|+.||||++...........+.+.+|+.+|..++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999998765444456678889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+++|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~-------- 152 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR-------- 152 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhcc--------
Confidence 999999999999988889999999999999999999999999999999999999999999999999987420
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+++
T Consensus 153 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~ 207 (291)
T cd05612 153 -------------------------DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIY 207 (291)
T ss_pred -------------------------CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112457999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDT 1072 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDt 1072 (1170)
+.+..+...+| ..++..+++||.+||+.||.+|++. ..+.++++||||+.++|..+... .++++|.... .++
T Consensus 208 ~~i~~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 284 (291)
T cd05612 208 EKILAGKLEFP---RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWDDVPQRKLKPPIVPKVSHDGDT 284 (291)
T ss_pred HHHHhCCcCCC---ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHHHHhcCCCCCCEeCCCCCcccc
Confidence 99988877665 5679999999999999999999962 35899999999999999987765 4455555333 555
Q ss_pred Ccccc
Q 001057 1073 SYFVS 1077 (1170)
Q Consensus 1073 s~F~s 1077 (1170)
.+|++
T Consensus 285 ~~~~~ 289 (291)
T cd05612 285 SNFDD 289 (291)
T ss_pred ccccC
Confidence 55543
No 19
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.4e-49 Score=440.18 Aligned_cols=271 Identities=40% Similarity=0.835 Sum_probs=245.8
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
....+++|++.+.||.|+||.||+|+++.+++.||+|++.+.........+.+.+|+.+|..++||||++++++|.+.+.
T Consensus 13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 92 (329)
T PTZ00263 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR 92 (329)
T ss_pred CCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCE
Confidence 34567899999999999999999999999999999999987655555567788999999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~--- 169 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP--- 169 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcC---
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999987420
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 170 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 219 (329)
T PTZ00263 170 ------------------------------DRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT 219 (329)
T ss_pred ------------------------------CCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence 01124579999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
..+++..+..+...+| ..++..+++||.+||+.||.+|+++ ..+.++++||||.+.+|+.+..+
T Consensus 220 ~~~~~~~i~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~~~~~~ 285 (329)
T PTZ00263 220 PFRIYEKILAGRLKFP---NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYAR 285 (329)
T ss_pred HHHHHHHHhcCCcCCC---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHHHHHhC
Confidence 9999999988877655 5689999999999999999999983 45899999999999999988754
No 20
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.2e-49 Score=434.42 Aligned_cols=282 Identities=42% Similarity=0.845 Sum_probs=248.7
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||+|+||.||+|++..+++.||+|++.+...........+..|+.+|..++||||++++++|.+.+.+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999999999999999876555556677888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCC
Q 001057 846 YSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGG 925 (1170)
Q Consensus 846 ~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~ 925 (1170)
.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~---------------- 144 (312)
T cd05585 81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNM---------------- 144 (312)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCc----------------
Confidence 9999888889999999999999999999999999999999999999999999999999987421
Q ss_pred ccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC
Q 001057 926 FLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDI 1005 (1170)
Q Consensus 926 ~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l 1005 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..++++.+.....
T Consensus 145 --------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~ 210 (312)
T cd05585 145 --------------KDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL 210 (312)
T ss_pred --------------cCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC
Confidence 001112346799999999999999999999999999999999999999999999999999888776
Q ss_pred CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCccccccc
Q 001057 1006 PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSRYV 1080 (1170)
Q Consensus 1006 ~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~~~ 1080 (1170)
.+| ..++.++++||.+||+.||.+|++..+|.++++||||...+|..+... .+++.|...+ .++++|+..+.
T Consensus 211 ~~~---~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (312)
T cd05585 211 RFP---DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWKKLLMKGIQPPFKPAVSSAIDTSNFDEEFT 285 (312)
T ss_pred CCC---CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCccchhhcCcccc
Confidence 655 678999999999999999999999878999999999999999877554 4566666544 66777765544
No 21
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2e-49 Score=437.40 Aligned_cols=283 Identities=42% Similarity=0.785 Sum_probs=247.1
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
+.||+|+||.||+|+++.+|+.||||++.+...........+.+|+.+|..++||||++++++|...+.+||||||++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765555566678889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 844 DLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 844 SL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~-------------- 146 (323)
T cd05571 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGI-------------- 146 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccc--------------
Confidence 999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNR 1003 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~ 1003 (1170)
.........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+...++..+...
T Consensus 147 ----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~ 210 (323)
T cd05571 147 ----------------SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 210 (323)
T ss_pred ----------------cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC
Confidence 0011123467999999999999999999999999999999999999999999988888888877
Q ss_pred CCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCccccc
Q 001057 1004 DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSR 1078 (1170)
Q Consensus 1004 ~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~ 1078 (1170)
...+| ..++.++.+||.+||+.||.+||+. ..+.++++||||.+++|..+... .+++.|...+ .++.+|+..
T Consensus 211 ~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T cd05571 211 EIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDVVQKKLEPPFKPQVTSETDTRYFDEE 287 (323)
T ss_pred CCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCcc
Confidence 76655 6799999999999999999999952 24899999999999999988754 4566665544 566666544
Q ss_pred c
Q 001057 1079 Y 1079 (1170)
Q Consensus 1079 ~ 1079 (1170)
+
T Consensus 288 ~ 288 (323)
T cd05571 288 F 288 (323)
T ss_pred c
Confidence 3
No 22
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.5e-49 Score=444.17 Aligned_cols=316 Identities=44% Similarity=0.797 Sum_probs=252.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||+||+|+++.+++.||||++.+...........+.+|+.+|..++|||||+++++|.+..++||||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999998765555566778899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+..........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~- 159 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY- 159 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc-
Confidence 9999999999999888899999999999999999999999999999999999999999999999999974211000000
Q ss_pred CCCCCCCC-----------ccccc---cccCC---CCC-cccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHH
Q 001057 918 APSLGSGG-----------FLVND---ELKDQ---PPL-TREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILF 979 (1170)
Q Consensus 918 a~sl~s~~-----------~l~~~---~l~~~---~~l-t~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 979 (1170)
........ ..... ..... ... ........+.+||+.|+|||++.+..++.++|||||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 00000000 00000 00000 000 00001122468999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhh
Q 001057 980 ELLIGIPPFNAKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLA 1057 (1170)
Q Consensus 980 ELLTG~pPF~g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~ 1057 (1170)
||++|.+||.+.+..+.+..+.... +.+|. ...++.++++||.+||+ +|.+|++..++.+++.||||++++|+.+.
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~~ 317 (377)
T cd05629 240 ECLIGWPPFCSENSHETYRKIINWRETLYFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTIR 317 (377)
T ss_pred hhhcCCCCCCCCCHHHHHHHHHccCCccCCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHHc
Confidence 9999999999988888888887643 33342 13578999999999998 89998865669999999999999999998
Q ss_pred hccCCCCCCCCC-CCCCccc
Q 001057 1058 RQKAMFIPAAES-LDTSYFV 1076 (1170)
Q Consensus 1058 ~~~ppfiP~~~s-lDts~F~ 1076 (1170)
...++++|.... .+..+|.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~ 337 (377)
T cd05629 318 QIRAPFIPQLKSITDTSYFP 337 (377)
T ss_pred cCCCCcccCCCCccccccCC
Confidence 878888887665 4555543
No 23
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-50 Score=446.84 Aligned_cols=259 Identities=32% Similarity=0.593 Sum_probs=235.4
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc-
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN- 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~- 832 (1170)
.+...+.+.+..||+|..|+||+|+++.|++.+|+|++.. ..+.....++.+|++|+..++|||||.+|++|.....
T Consensus 75 ~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 75 GISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred ccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 3556689999999999999999999999999999999843 2356677889999999999999999999999999995
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
++|+||||.||+|..++...++++|.....++.+|+.||.|||+ ++||||||||+||||+..|.|||||||.++...
T Consensus 153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lv-- 230 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILV-- 230 (364)
T ss_pred EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhh--
Confidence 99999999999999999999999999999999999999999995 999999999999999999999999999998631
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
....++++||..|||||.+.+..|+.++||||||++++||++|+.||...
T Consensus 231 ------------------------------nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~ 280 (364)
T KOG0581|consen 231 ------------------------------NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP 280 (364)
T ss_pred ------------------------------hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence 12457899999999999999999999999999999999999999999874
Q ss_pred -----CHHHHHHHHhccCCCCCCCCcc-CCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 992 -----TPQQIFDNIMNRDIPWPNIPEE-MSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 992 -----~~~ei~qkIl~~~l~fP~ip~~-lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+..+++..|+.+..+ .+|.. +|+++++||..||++||.+|++ ++++++|||++..
T Consensus 281 ~~~~~~~~~Ll~~Iv~~ppP--~lP~~~fS~ef~~FV~~CL~Kdp~~R~s---~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 281 NPPYLDIFELLCAIVDEPPP--RLPEGEFSPEFRSFVSCCLRKDPSERPS---AKQLLQHPFIKKF 341 (364)
T ss_pred CCCCCCHHHHHHHHhcCCCC--CCCcccCCHHHHHHHHHHhcCCcccCCC---HHHHhcCHHHhhc
Confidence 677888899886653 45565 9999999999999999999999 8999999999864
No 24
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.6e-49 Score=444.85 Aligned_cols=317 Identities=46% Similarity=0.750 Sum_probs=251.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+|..++|||||+++++|.+.+.+|||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 69999999999999999999999999999999987766566677889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
||+||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|.............
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~ 161 (382)
T cd05625 82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161 (382)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccc
Confidence 99999999999888889999999999999999999999999999999999999999999999999986421000000000
Q ss_pred CC---C-CCCCccc----------cccc---cCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHH
Q 001057 919 PS---L-GSGGFLV----------NDEL---KDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFEL 981 (1170)
Q Consensus 919 ~s---l-~s~~~l~----------~~~l---~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 981 (1170)
.. . ....+.. .... ..............+.+||+.|+|||++.+..|+.++|||||||+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~el 241 (382)
T cd05625 162 SGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 241 (382)
T ss_pred cccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHH
Confidence 00 0 0000000 0000 0000000111123456899999999999999999999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHhccCC--CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc
Q 001057 982 LIGIPPFNAKTPQQIFDNIMNRDI--PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 982 LTG~pPF~g~~~~ei~qkIl~~~l--~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
++|.+||.+.+..+....+..... .+|. ...+++++.+||.+|+. +|.+|++..++.++++||||++++|.....+
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~ 319 (382)
T cd05625 242 LVGQPPFLAQTPLETQMKVINWQTSLHIPP-QAKLSPEASDLIIKLCR-GPEDRLGKNGADEIKAHPFFKTIDFSSDLRQ 319 (382)
T ss_pred HhCCCCCCCCCHHHHHHHHHccCCCcCCCC-cccCCHHHHHHHHHHcc-CHhHcCCCCCHHHHhcCCCcCCcChHHHHhc
Confidence 999999999988887777776433 2331 24689999999999875 9999999778999999999999999874443
Q ss_pred -cCCCCCCCCC-CCCCcccc
Q 001057 1060 -KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1060 -~ppfiP~~~s-lDts~F~s 1077 (1170)
.++++|.... .++.+|+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~ 339 (382)
T cd05625 320 QSAPYIPKITHPTDTSNFDP 339 (382)
T ss_pred CCCCccCcCCCcchhhhcCC
Confidence 6677777655 66667654
No 25
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.5e-48 Score=430.03 Aligned_cols=286 Identities=38% Similarity=0.792 Sum_probs=246.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CcEEEEEeeeecccceEEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN-PFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H-PNIVrL~~~Fqd~~~LyLVM 837 (1170)
+|++++.||+|+||.||+|++..+++.||||++.+.........+.+..|+.++..+.| ++|++++++|.+.+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 58999999999999999999999999999999987655455566788899999999976 46889999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~------- 153 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF------- 153 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC-------
Confidence 9999999999998888899999999999999999999999999999999999999999999999999863210
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
........+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+++
T Consensus 154 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~ 210 (324)
T cd05587 154 -----------------------GGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF 210 (324)
T ss_pred -----------------------CCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH
Confidence 001123467999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDT 1072 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDt 1072 (1170)
..+......+| ..++.++.+||.+||..||.+|++. ....++++||||..++|..+... .+++.|.... .+.
T Consensus 211 ~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (324)
T cd05587 211 QSIMEHNVSYP---KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEKLERREIQPPFKPKVKGRRSA 287 (324)
T ss_pred HHHHcCCCCCC---CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCccCcCCCcchh
Confidence 99988776555 6789999999999999999999984 34589999999999999988655 4555555433 344
Q ss_pred Ccccc
Q 001057 1073 SYFVS 1077 (1170)
Q Consensus 1073 s~F~s 1077 (1170)
.+|+.
T Consensus 288 ~~~~~ 292 (324)
T cd05587 288 ENFDK 292 (324)
T ss_pred hhcCc
Confidence 44443
No 26
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-49 Score=444.11 Aligned_cols=262 Identities=36% Similarity=0.653 Sum_probs=239.6
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
....+|.+.+.||+|+||+||+|+++.++..||||.+.+..+ ..+.++.+..|+.||+.++|||||+|++++.+++.+|
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence 346789999999999999999999999999999999988754 4567788899999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC------CcEEEEecCCcccc
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD------GHIKLTDFGLSKVG 908 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d------G~VKLsDFGLAk~~ 908 (1170)
||||||.||||..+|++.+.+++..++.++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 999999999999999999999999999999999999999999999999999999999865 35899999999963
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
.......+.||||.|||||++....|+.++|+||+|+|||+|++|++||
T Consensus 166 -------------------------------~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf 214 (429)
T KOG0595|consen 166 -------------------------------QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPF 214 (429)
T ss_pred -------------------------------CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCc
Confidence 1233456789999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 989 NAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...+..+++..+..+.-..|.++..++....+|+..+|+.+|..|.+ ..+.+.|++...-
T Consensus 215 ~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~---~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 215 DAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRIS---FEDFFDHPFLAAN 274 (429)
T ss_pred cccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCc---hHHhhhhhhcccC
Confidence 99999999999988877777777889999999999999999999998 6677889888653
No 27
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-48 Score=428.89 Aligned_cols=288 Identities=38% Similarity=0.769 Sum_probs=249.8
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
+|++++.||+|+||.||+|+++.+++.||||++.+...........+..|..++..+ +|++|++++++|.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 589999999999999999999999999999999876544455566777888888877 5899999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+++|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~-------- 152 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM-------- 152 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecC--------
Confidence 999999999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+...++
T Consensus 153 ----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~ 210 (323)
T cd05616 153 ----------------------WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 210 (323)
T ss_pred ----------------------CCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHH
Confidence 0011123467999999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAESLDTS 1073 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~slDts 1073 (1170)
+.+......+| ..++.++.+||.+||+.||.+|++. ....++++||||+.++|+.+..+ ++++.|.....+..
T Consensus 211 ~~i~~~~~~~p---~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T cd05616 211 QSIMEHNVAYP---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEVQPPYKPKACGRDAE 287 (323)
T ss_pred HHHHhCCCCCC---CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCchhh
Confidence 99988777655 6789999999999999999999984 35789999999999999998766 56676655444555
Q ss_pred cccccc
Q 001057 1074 YFVSRY 1079 (1170)
Q Consensus 1074 ~F~s~~ 1079 (1170)
+|+..+
T Consensus 288 ~~~~~~ 293 (323)
T cd05616 288 NFDKFF 293 (323)
T ss_pred hcCchh
Confidence 554433
No 28
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-48 Score=437.47 Aligned_cols=282 Identities=40% Similarity=0.801 Sum_probs=249.5
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCC-CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATG-DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TG-e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
......++|++++.||+|+||.||+|++..++ ..||+|++.+.........+.+.+|+.++..++||||++++++|.+.
T Consensus 24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 103 (340)
T PTZ00426 24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE 103 (340)
T ss_pred CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence 34567789999999999999999999876655 78999999876655556677889999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
..+|+||||+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~- 182 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD- 182 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecC-
Confidence 9999999999999999999988889999999999999999999999999999999999999999999999999987420
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
......+||+.|||||++.+..++.++|||||||++|||++|.+||.+
T Consensus 183 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 183 --------------------------------TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred --------------------------------CCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 011245799999999999998899999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCC
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPA 1066 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~ 1066 (1170)
.+...+++.+..+...+| ..++..+.+||++||+.||.+|++. .+++++++||||++++|..+... .++++|.
T Consensus 231 ~~~~~~~~~i~~~~~~~p---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~~~~~~~~~~~~p~ 307 (340)
T PTZ00426 231 NEPLLIYQKILEGIIYFP---KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVSLLHKNVEVPYKPK 307 (340)
T ss_pred CCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCC
Confidence 999889999988777655 6789999999999999999999852 35899999999999999987755 4566666
Q ss_pred CCC
Q 001057 1067 AES 1069 (1170)
Q Consensus 1067 ~~s 1069 (1170)
...
T Consensus 308 ~~~ 310 (340)
T PTZ00426 308 YKN 310 (340)
T ss_pred CCC
Confidence 543
No 29
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.4e-48 Score=436.73 Aligned_cols=317 Identities=41% Similarity=0.744 Sum_probs=250.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||+||+|+++.+++.||||++.+...........+..|+.++..++||||+++++.|.+.+++||||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765555566778899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++.+.+.+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+...........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999998753211000000
Q ss_pred C--CCCCCCCccc---cccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 918 A--PSLGSGGFLV---NDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 918 a--~sl~s~~~l~---~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
. ......+..+ +.................+.+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~ 240 (360)
T cd05627 161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET 240 (360)
T ss_pred cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence 0 0000000000 0000000000011122345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC-
Q 001057 993 PQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES- 1069 (1170)
Q Consensus 993 ~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s- 1069 (1170)
....+..+.+.. +.+|. ...++.++++||.+|+. ||.+|+++.++.++++||||++++|..+....++..+...+
T Consensus 241 ~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~~~~~~~~~~~~~~~~~~~ 318 (360)
T cd05627 241 PQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVDWGHIRERPAAIPIEIKSI 318 (360)
T ss_pred HHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCCHHHHhcCCCCCCccCCCc
Confidence 999888888643 33342 12478999999999875 99999997789999999999999999987764433232323
Q ss_pred CCCCccc
Q 001057 1070 LDTSYFV 1076 (1170)
Q Consensus 1070 lDts~F~ 1076 (1170)
.+.++|.
T Consensus 319 ~~~~~~~ 325 (360)
T cd05627 319 DDTSNFD 325 (360)
T ss_pred chhhhcC
Confidence 4555554
No 30
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-49 Score=447.37 Aligned_cols=260 Identities=39% Similarity=0.708 Sum_probs=236.0
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccH--HHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRK--NAVESILAERNILISVR-NPFVVRFFYSFTCRE 831 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~--~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~ 831 (1170)
...+.|.+.+.||.|+||+|++|.+..+|+.||+|++.+...... ...+.+.+|+.+++.++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 556789999999999999999999999999999998776532211 34566778999999999 999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC-CcEEEEecCCcccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD-GHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d-G~VKLsDFGLAk~~~~ 910 (1170)
.+|||||||.||+|++++.+.+++.|..++.+++||+.|++|||++||+||||||||||++.+ +++||+|||++....
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~- 172 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP- 172 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-
Confidence 999999999999999999999999999999999999999999999999999999999999999 999999999998520
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-C-CcchhhhHHHHHHHHHHhCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-H-GATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-y-s~ksDIWSLGVILYELLTG~pPF 988 (1170)
.......+.|||+.|+|||++.+.. | +.++||||+||+||.|++|+.||
T Consensus 173 -----------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF 223 (370)
T KOG0583|consen 173 -----------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPF 223 (370)
T ss_pred -----------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCC
Confidence 1123456789999999999999977 7 48899999999999999999999
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCccC-CHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 989 NAKTPQQIFDNIMNRDIPWPNIPEEM-SVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~l~fP~ip~~l-S~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
...+...++..|..+.+.+| ..+ |.++++||.+||..||.+|++ +.+|+.||||+.
T Consensus 224 ~d~~~~~l~~ki~~~~~~~p---~~~~S~~~~~Li~~mL~~~P~~R~t---~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 224 DDSNVPNLYRKIRKGEFKIP---SYLLSPEARSLIEKMLVPDPSTRIT---LLEILEHPWFQK 280 (370)
T ss_pred CCccHHHHHHHHhcCCccCC---CCcCCHHHHHHHHHHcCCCcccCCC---HHHHhhChhhcc
Confidence 99999999999999999877 566 999999999999999999999 889999999986
No 31
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=6.3e-48 Score=435.75 Aligned_cols=315 Identities=43% Similarity=0.722 Sum_probs=245.7
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|++++.||+|+||+||+|++..+++.||||++.+...........+.+|+.+|..++||||++++++|.+.+++|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 69999999999999999999999999999999988766666677889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC-
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS- 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~- 917 (1170)
|++||+|.+++.+.+.+++..++.+++||+.||.|||++||+||||||+||||+.+|++||+|||+++...........
T Consensus 82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~ 161 (381)
T cd05626 82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161 (381)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccccc
Confidence 9999999999998888999999999999999999999999999999999999999999999999998643110000000
Q ss_pred ------CCCCCCCC-------cccccccc---CCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHH
Q 001057 918 ------APSLGSGG-------FLVNDELK---DQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFEL 981 (1170)
Q Consensus 918 ------a~sl~s~~-------~l~~~~l~---~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 981 (1170)
........ ........ .............+.+||+.|||||++.+..|+.++|||||||++|||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~el 241 (381)
T cd05626 162 KGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241 (381)
T ss_pred ccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHH
Confidence 00000000 00000000 000000011123457899999999999998999999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCC--CCCCCChhhHHHHHcCCCCCCCChhhhh
Q 001057 982 LIGIPPFNAKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTEN--PVQRLGATGAREVKQHPFFKNINWDTLA 1057 (1170)
Q Consensus 982 LTG~pPF~g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~D--PskRpSa~~AeEILqHPfF~~idwe~L~ 1057 (1170)
++|.+||...+..+....+.... ..+|. ...+++++.+||.+||+.+ |..|++ +.++++||||++++|....
T Consensus 242 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~~---~~~~l~hp~f~~~~~~~~~ 317 (381)
T cd05626 242 LVGQPPFLAPTPTETQLKVINWENTLHIPP-QVKLSPEAVDLITKLCCSAEERLGRNG---ADDIKAHPFFSEVDFSSDI 317 (381)
T ss_pred HhCCCCCcCCCHHHHHHHHHccccccCCCC-CCCCCHHHHHHHHHHccCcccccCCCC---HHHHhcCcccCCCChhHHh
Confidence 99999999888877776666432 33332 2368999999999977654 444887 8999999999999998754
Q ss_pred hc-cCCCCCCCCC-CCCCcccc
Q 001057 1058 RQ-KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1058 ~~-~ppfiP~~~s-lDts~F~s 1077 (1170)
.. .++++|.... .++++|+.
T Consensus 318 ~~~~~~~~p~~~~~~~~~~~~~ 339 (381)
T cd05626 318 RTQPAPYVPKISHPMDTSNFDP 339 (381)
T ss_pred hcCCCCccCcCCCcchhhhcCC
Confidence 44 5677776544 56666643
No 32
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.1e-48 Score=428.01 Aligned_cols=281 Identities=40% Similarity=0.792 Sum_probs=245.1
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|+++.+++.||||++.+...........+..|..++..+ +||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999999999999999999876544455667788899998876 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~------------- 147 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI------------- 147 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecC-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+++..+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~ 210 (320)
T cd05590 148 -----------------FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN 210 (320)
T ss_pred -----------------cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence 001112345799999999999998999999999999999999999999999999999999988
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh---hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA---TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFV 1076 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa---~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~ 1076 (1170)
....+| ..++.++.+||.+||+.||.+|+++ .+.+++++||||.+++|+.+..+ .+++.|...+ .+.++|+
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (320)
T cd05590 211 DEVVYP---TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWEKLNRRQIEPPFRPRIKSREDVSNFD 287 (320)
T ss_pred CCCCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcC
Confidence 776655 5789999999999999999999995 23589999999999999988665 5677777655 5556665
Q ss_pred c
Q 001057 1077 S 1077 (1170)
Q Consensus 1077 s 1077 (1170)
.
T Consensus 288 ~ 288 (320)
T cd05590 288 P 288 (320)
T ss_pred c
Confidence 4
No 33
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-49 Score=432.50 Aligned_cols=296 Identities=35% Similarity=0.724 Sum_probs=268.5
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccc
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~ 831 (1170)
..+.+++|+++++||+|+|++|.+++.+.|.+.||||+++|.-....+.+..++.|..+..+. +||++|.|+.+|+...
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 356788999999999999999999999999999999999998887888889999999998765 6999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
.+++|.||++||+|..++++...++++.+++|.++|+.||+|||++|||+||||.+|+|||..|++||+|+|+|+...
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l-- 402 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL-- 402 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998531
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC-
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA- 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g- 990 (1170)
..+..+.++||||.|+|||++.+..|++++|||+|||+||||+.|+.||.-
T Consensus 403 ----------------------------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv 454 (593)
T KOG0695|consen 403 ----------------------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV 454 (593)
T ss_pred ----------------------------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence 123356789999999999999999999999999999999999999999951
Q ss_pred -------CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC---hhhHHHHHcCCCCCCCChhhhhhc-
Q 001057 991 -------KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG---ATGAREVKQHPFFKNINWDTLARQ- 1059 (1170)
Q Consensus 991 -------~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS---a~~AeEILqHPfF~~idwe~L~~~- 1059 (1170)
.+.+-+++-|+..++..| ..+|-.+..+++..|++||.+|++ -.+..++..|+||+.++|+.+..+
T Consensus 455 gm~n~d~ntedylfqvilekqirip---rslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk~ 531 (593)
T KOG0695|consen 455 GMDNPDMNTEDYLFQVILEKQIRIP---RSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQKQ 531 (593)
T ss_pred cCCCcccchhHHHHHHHhhhccccc---ceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhcc
Confidence 234557788888888665 689999999999999999999998 347899999999999999999887
Q ss_pred -cCCCCCCCCC-CCCCcccccccc
Q 001057 1060 -KAMFIPAAES-LDTSYFVSRYVW 1081 (1170)
Q Consensus 1060 -~ppfiP~~~s-lDts~F~s~~~~ 1081 (1170)
.|||.|.+.+ .+..+|+..|+.
T Consensus 532 v~ppf~p~i~~d~~l~~fd~qft~ 555 (593)
T KOG0695|consen 532 VLPPFQPQITDDYGLDNFDTQFTS 555 (593)
T ss_pred cCCCCCCccccccCcccccccccc
Confidence 6899999887 788899988764
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=5.8e-48 Score=416.86 Aligned_cols=274 Identities=35% Similarity=0.613 Sum_probs=234.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+|..++|+||++++++|.+.+.+|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 38899999999999999999999999999999887654444445667899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+++|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~------- 153 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIP------- 153 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC-------
Confidence 99999999888643 358999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH--
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ-- 994 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~-- 994 (1170)
........+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 154 ------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~ 209 (285)
T cd05631 154 ------------------------EGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK 209 (285)
T ss_pred ------------------------CCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh
Confidence 000112457999999999999999999999999999999999999999876543
Q ss_pred --HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCC
Q 001057 995 --QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPA 1066 (1170)
Q Consensus 995 --ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~ 1066 (1170)
.+...+...... ++..++.++.+||.+||+.||.+|++. .++.++++||||.+++|+.+... .|+|+|.
T Consensus 210 ~~~~~~~~~~~~~~---~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05631 210 REEVDRRVKEDQEE---YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRLEANMLEPPFCPD 284 (285)
T ss_pred HHHHHHHhhccccc---CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHHHhCcCCcCCCCC
Confidence 223333333333 336789999999999999999999984 35899999999999999999987 7788875
No 35
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.7e-48 Score=428.49 Aligned_cols=284 Identities=40% Similarity=0.779 Sum_probs=246.6
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+|+.++||||++++++|...+.+||||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765555566778889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 844 DLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 844 SL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~-------------- 146 (328)
T cd05593 81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGI-------------- 146 (328)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCC--------------
Confidence 999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNR 1003 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~ 1003 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+++..+...
T Consensus 147 ----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~ 210 (328)
T cd05593 147 ----------------TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 210 (328)
T ss_pred ----------------CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC
Confidence 0001123457999999999999989999999999999999999999999998888888888777
Q ss_pred CCCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCccccc
Q 001057 1004 DIPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSR 1078 (1170)
Q Consensus 1004 ~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~ 1078 (1170)
...+| ..++.++.+||.+||+.||.+|++ ...+.++++||||.+++|..+... .+++.|...+ .++.+|...
T Consensus 211 ~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (328)
T cd05593 211 DIKFP---RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQDVYDKKLVPPFKPQVTSETDTRYFDEE 287 (328)
T ss_pred CccCC---CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCcc
Confidence 76655 679999999999999999999985 235999999999999999987655 4566666554 556666654
Q ss_pred cc
Q 001057 1079 YV 1080 (1170)
Q Consensus 1079 ~~ 1080 (1170)
+.
T Consensus 288 ~~ 289 (328)
T cd05593 288 FT 289 (328)
T ss_pred cc
Confidence 43
No 36
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1e-47 Score=431.57 Aligned_cols=318 Identities=45% Similarity=0.734 Sum_probs=247.1
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||.||+|++..+++.||||++.+...........+.+|+.+|..++||||+++++.|.+.+.+||||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765545556678889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|............
T Consensus 81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999998642110000000
Q ss_pred C-------CCCCCCCccccccccCCCCC------cccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhC
Q 001057 918 A-------PSLGSGGFLVNDELKDQPPL------TREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 918 a-------~sl~s~~~l~~~~l~~~~~l------t~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 984 (1170)
. ...................+ ..........+||+.|||||++.+..++.++|||||||++|||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 0 00000000000000000000 0001122356899999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCC-CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc-cCC
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPN-IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ-KAM 1062 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~-ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~-~pp 1062 (1170)
.+||.+.+..+....+.......+. ....++.++.+||.+|+. +|.+|++...+.++++||||++++|..+... .++
T Consensus 241 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~~-~p~~R~~~~t~~ell~h~~~~~~~~~~~~~~~~~~ 319 (376)
T cd05598 241 QPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLCC-GAEDRLGKNGADEIKAHPFFKGIDFASLIRRQKAP 319 (376)
T ss_pred CCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhCCCCcCCCCHHHHhhcCCCC
Confidence 9999998888777777654332211 123689999999999875 9999996555999999999999999988543 566
Q ss_pred CCCCCCC-CCCCccc
Q 001057 1063 FIPAAES-LDTSYFV 1076 (1170)
Q Consensus 1063 fiP~~~s-lDts~F~ 1076 (1170)
++|.... .++++|.
T Consensus 320 ~~~~~~~~~~~~~~~ 334 (376)
T cd05598 320 YIPKITHPTDTSNFD 334 (376)
T ss_pred CCCcCCCcchhhhcC
Confidence 6666543 4444544
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.5e-48 Score=425.38 Aligned_cols=282 Identities=46% Similarity=0.830 Sum_probs=247.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||.||+|++..+++.||||++.+...........+.+|+.+|..++||||++++++|.+.+.+||||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998765444556678899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~-------- 152 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV-------- 152 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccc--------
Confidence 999999999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+
T Consensus 153 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~ 207 (333)
T cd05600 153 -------------------------TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW 207 (333)
T ss_pred -------------------------cccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH
Confidence 0223467999999999999999999999999999999999999999999988888
Q ss_pred HHHhccCC--CCCCCC---ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC-CC
Q 001057 998 DNIMNRDI--PWPNIP---EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES-LD 1071 (1170)
Q Consensus 998 qkIl~~~l--~fP~ip---~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s-lD 1071 (1170)
..+..... ..|... ..++.++.+||.+||..+|.+|++ +.++++||||.+++|..+....++++|...+ .+
T Consensus 208 ~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s---~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (333)
T cd05600 208 ENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGS---LEDIKNHPFFKEVDWNELRELKPPFVPELESEID 284 (333)
T ss_pred HHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCC---HHHHHhCcccCCCCHHHHhhCCCCCCCCCCCcch
Confidence 77765432 222211 256999999999999999999999 8899999999999999988777888887654 44
Q ss_pred CCcc
Q 001057 1072 TSYF 1075 (1170)
Q Consensus 1072 ts~F 1075 (1170)
..+|
T Consensus 285 ~~~~ 288 (333)
T cd05600 285 TGYF 288 (333)
T ss_pred hhhc
Confidence 4444
No 38
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.6e-48 Score=425.00 Aligned_cols=282 Identities=41% Similarity=0.775 Sum_probs=245.1
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
+.||+|+||.||+|++..+|..||+|++.+...........+.+|+.++..++||||++++++|...+.+||||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765545556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 844 DLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 844 SL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~------------- 147 (323)
T cd05595 81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS------------- 147 (323)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccC-------------
Confidence 9999998888899999999999999999999999999999999999999999999999999874210
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcc
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNR 1003 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~ 1003 (1170)
........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+....+..+...
T Consensus 148 -----------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~ 210 (323)
T cd05595 148 -----------------DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME 210 (323)
T ss_pred -----------------CCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Confidence 001122457999999999999989999999999999999999999999999988888888877
Q ss_pred CCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCccccc
Q 001057 1004 DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSR 1078 (1170)
Q Consensus 1004 ~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~ 1078 (1170)
...+| ..+++++.+||.+||+.||.+|++. ..+.++++||||.+++|..+... .+++.|...+ .++.+|+..
T Consensus 211 ~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T cd05595 211 EIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDE 287 (323)
T ss_pred CCCCC---CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCChhhhhhcCcc
Confidence 76655 6789999999999999999999952 35899999999999999987655 3566666555 555566544
No 39
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.4e-48 Score=426.03 Aligned_cols=313 Identities=47% Similarity=0.832 Sum_probs=251.9
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||+||+|++..+|+.||||++.+...........+..|+.+|..++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998766555566778899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|.+++.+.+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 99999999999998888999999999999999999999999999999999999999999999999999753211100000
Q ss_pred CCCCCCCCcccc-ccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVN-DELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~-~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.......... ....................||+.|+|||++.+..++.++|||||||++|||++|..||.+.+....
T Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 161 --LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred --ccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 0000000000 0000000001111223456799999999999999999999999999999999999999999998888
Q ss_pred HHHHhc--cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC-CCCC
Q 001057 997 FDNIMN--RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES-LDTS 1073 (1170)
Q Consensus 997 ~qkIl~--~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s-lDts 1073 (1170)
+..+.. ....+|.. ..+++++.+||.+||. ||.+|++ .+.++++||||++++|+......++++|...+ .++.
T Consensus 239 ~~~i~~~~~~~~~p~~-~~~~~~~~~li~~ll~-dp~~R~~--s~~~ll~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (350)
T cd05573 239 YNKIINWKESLRFPPD-PPVSPEAIDLICRLLC-DPEDRLG--SFEEIKSHPFFKGIDWENLRETKPPFVPELSSPLDTS 314 (350)
T ss_pred HHHHhccCCcccCCCC-CCCCHHHHHHHHHHcc-ChhhcCC--CHHHHhcCCCcCCCCHHHHhhCCCCcCCCCCCchhhh
Confidence 888887 44444432 2479999999999998 9999998 37799999999999999888777778777655 4444
Q ss_pred ccc
Q 001057 1074 YFV 1076 (1170)
Q Consensus 1074 ~F~ 1076 (1170)
.|+
T Consensus 315 ~~~ 317 (350)
T cd05573 315 NFD 317 (350)
T ss_pred hcC
Confidence 443
No 40
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.4e-47 Score=420.26 Aligned_cols=281 Identities=41% Similarity=0.808 Sum_probs=239.7
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILsk-L~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|++..+++.||||++++.........+.+..|..++.. .+||||++++++|.....+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 369999999999999999999999999987654444455666777777765 4799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~------------- 147 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENM------------- 147 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECC-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+++..+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~ 210 (316)
T cd05592 148 -----------------NGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN 210 (316)
T ss_pred -----------------CCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence 001122346799999999999998999999999999999999999999999999888888876
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSRY 1079 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~~ 1079 (1170)
....+ +..++.++.+||.+||+.||.+|++. +.++++||||..++|..+... .+++.|.... .+..+|+..+
T Consensus 211 ~~~~~---~~~~~~~~~~ll~~~l~~~P~~R~~~--~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd05592 211 DRPHF---PRWISKEAKDCLSKLFERDPTKRLGV--DGDIRQHPFFRGIDWERLEKREIPPPFKPKVKSPSDASNFDREF 285 (316)
T ss_pred CCCCC---CCCCCHHHHHHHHHHccCCHHHcCCC--hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCccc
Confidence 55444 46789999999999999999999983 458899999999999987755 4556665544 5556665443
No 41
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.5e-47 Score=420.21 Aligned_cols=288 Identities=36% Similarity=0.759 Sum_probs=249.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
+|++.+.||+|+||+||+|+++.+|+.||||++.+.........+.+..|..++..+. |++|++++++|.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4889999999999999999999999999999998765444555677888999998886 577889999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~-------- 152 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM-------- 152 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccC--------
Confidence 999999999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+...++
T Consensus 153 ----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~ 210 (323)
T cd05615 153 ----------------------VDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELF 210 (323)
T ss_pred ----------------------CCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0011123457999999999999989999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh--hHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT--GAREVKQHPFFKNINWDTLARQ--KAMFIPAAESLDTS 1073 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~--~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~slDts 1073 (1170)
+.+......+| ..++.++.+||.+||+.||.+|++.. .+.++++||||..++|..+... .+++.|........
T Consensus 211 ~~i~~~~~~~p---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T cd05615 211 QSIMEHNVSYP---KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDKLENREIQPPFKPKVCGKGAE 287 (323)
T ss_pred HHHHhCCCCCC---ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHHHhcCCCCcCccCccCCCchh
Confidence 99988777655 67899999999999999999999843 4789999999999999988766 56777754444445
Q ss_pred cccccc
Q 001057 1074 YFVSRY 1079 (1170)
Q Consensus 1074 ~F~s~~ 1079 (1170)
+|+..+
T Consensus 288 ~~~~~~ 293 (323)
T cd05615 288 NFDKFF 293 (323)
T ss_pred hcCccc
Confidence 554443
No 42
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.1e-47 Score=422.56 Aligned_cols=281 Identities=37% Similarity=0.726 Sum_probs=238.0
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|++..+++.||+|++.+...........+..|+.++.++ +||||++++++|.+...+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999999999999999999876555556677888999999888 599999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~------------- 147 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGL------------- 147 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceecc-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC-------CHHH
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK-------TPQQ 995 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~-------~~~e 995 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||... ....
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~ 210 (327)
T cd05617 148 -----------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDY 210 (327)
T ss_pred -----------------CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHH
Confidence 0011123467999999999999999999999999999999999999999632 2334
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh---hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA---TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES- 1069 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa---~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s- 1069 (1170)
+++.+......+| ..++..+.+||.+||+.||.+|+++ .++.++++||||+.++|+.+... .+++.|....
T Consensus 211 ~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
T cd05617 211 LFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDWDLLEKKQVTPPFKPQITDD 287 (327)
T ss_pred HHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCHHHHHhCCCCCCccCCCCCC
Confidence 5555655555444 6789999999999999999999984 35789999999999999988765 4566666544
Q ss_pred CCCCcccc
Q 001057 1070 LDTSYFVS 1077 (1170)
Q Consensus 1070 lDts~F~s 1077 (1170)
.+..+|+.
T Consensus 288 ~~~~~~~~ 295 (327)
T cd05617 288 YGLENFDT 295 (327)
T ss_pred cchhhcCC
Confidence 34455544
No 43
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.4e-47 Score=419.96 Aligned_cols=271 Identities=40% Similarity=0.802 Sum_probs=237.5
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||.||+|+++.+++.||||++.+...........+..|..++..+ +||||++++++|.+.+.+||||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 3699999999999999999999999999876554555667788899999865 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~------------- 147 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGI------------- 147 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecc-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..++++.+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~ 210 (321)
T cd05591 148 -----------------LNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH 210 (321)
T ss_pred -----------------cCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 001112345799999999999998999999999999999999999999999999999999988
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh----hHHHHHcCCCCCCCChhhhhhc--cCCCCCCC
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT----GAREVKQHPFFKNINWDTLARQ--KAMFIPAA 1067 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~----~AeEILqHPfF~~idwe~L~~~--~ppfiP~~ 1067 (1170)
....+| ..++.++.+||.+||+.||.+|++.. .+.++++||||..++|..+... .+++.|..
T Consensus 211 ~~~~~p---~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~~~~~~~~~~~~~~~~ 278 (321)
T cd05591 211 DDVLYP---VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWVLLEQRKIKPPFKPKI 278 (321)
T ss_pred CCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHHHHHhCCCCCCCCCCC
Confidence 776655 56899999999999999999999532 4899999999999999988665 34555544
No 44
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-47 Score=422.51 Aligned_cols=283 Identities=41% Similarity=0.776 Sum_probs=245.0
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
+.||+|+||.||+|++..+|+.||+|++.+...........+..|+.++..++||||++++++|...+.+||||||++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999999999999999998765545556677889999999999999999999999999999999999999
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 844 DLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 844 SL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
+|..++...+.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+||+|||+|+...
T Consensus 81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~------------- 147 (325)
T cd05594 81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI------------- 147 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecC-------------
Confidence 999999888889999999999999999999997 799999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|||||++.+..++.++|||||||++|+|++|..||.+.+...++..+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~ 210 (325)
T cd05594 148 -----------------KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM 210 (325)
T ss_pred -----------------CCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc
Confidence 000112245799999999999998999999999999999999999999999998888888887
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s 1077 (1170)
....+| ..+++++.+||.+||+.||.+|++. ..+.++++||||.++.|...... .+++.|...+ .++.+|+.
T Consensus 211 ~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
T cd05594 211 EEIRFP---RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQDVYEKKLVPPFKPQVTSETDTRYFDE 287 (325)
T ss_pred CCCCCC---CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCc
Confidence 776655 6789999999999999999999842 24899999999999999987654 3556665544 56666665
Q ss_pred cc
Q 001057 1078 RY 1079 (1170)
Q Consensus 1078 ~~ 1079 (1170)
.+
T Consensus 288 ~~ 289 (325)
T cd05594 288 EF 289 (325)
T ss_pred hh
Confidence 44
No 45
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.5e-48 Score=424.07 Aligned_cols=282 Identities=43% Similarity=0.802 Sum_probs=240.5
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV---RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL---~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
||+|+||+||+|+++.+++.||||++.+..............|..++..+ +||||++++++|.....+|+||||+.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999876554555556677788888765 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~------------- 147 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANL------------- 147 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCC-------------
Confidence 9999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIM 1001 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl 1001 (1170)
.........+||+.|||||++.+. .++.++|||||||++|+|++|..||.+.+..+++..+.
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~ 210 (330)
T cd05586 148 -----------------TDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA 210 (330)
T ss_pred -----------------CCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH
Confidence 001122356799999999999764 48999999999999999999999999999999998888
Q ss_pred ccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh-hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccc
Q 001057 1002 NRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA-TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1002 ~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa-~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s 1077 (1170)
.+...++. ..++.++.+||.+||+.||.+||++ ..+.++++||||...+|+.+... .+++.|.... .+.++|+.
T Consensus 211 ~~~~~~~~--~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (330)
T cd05586 211 FGKVRFPK--NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFDP 288 (330)
T ss_pred cCCCCCCC--ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCccCCCCCCcchhhcCc
Confidence 87776653 3579999999999999999999974 36899999999999999987665 4556665544 45555554
Q ss_pred cc
Q 001057 1078 RY 1079 (1170)
Q Consensus 1078 ~~ 1079 (1170)
.+
T Consensus 289 ~~ 290 (330)
T cd05586 289 EF 290 (330)
T ss_pred cc
Confidence 43
No 46
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.7e-47 Score=418.95 Aligned_cols=284 Identities=40% Similarity=0.784 Sum_probs=242.7
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHH---HhcCCCcEEEEEeeeecccceEEE
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNIL---ISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieIL---skL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
|++++.||+|+||.||+|.+..+|+.||||++.+.........+.+..|+.++ ..++||||++++++|.+.+.+|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 78999999999999999999999999999999876544455566777787766 456799999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||++||+|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~------- 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM------- 152 (324)
T ss_pred EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCC-------
Confidence 999999999988865 579999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........+||+.|||||++.+..++.++|||||||++|+|++|..||.+.+..++
T Consensus 153 -----------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~ 209 (324)
T cd05589 153 -----------------------GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV 209 (324)
T ss_pred -----------------------CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 001122356799999999999998999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LD 1071 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lD 1071 (1170)
+..+......+| ..++..+.+||.+||+.||.+||++ ..+.++++||||++++|..+... .++++|.... .|
T Consensus 210 ~~~i~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~d 286 (324)
T cd05589 210 FDSIVNDEVRYP---RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWDDLLARKIKPPFVPTIKGPED 286 (324)
T ss_pred HHHHHhCCCCCC---CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHHHHHhCCCCcCccCCCCCcch
Confidence 888888776555 6789999999999999999999963 25899999999999999987654 4566665443 34
Q ss_pred CCcccc
Q 001057 1072 TSYFVS 1077 (1170)
Q Consensus 1072 ts~F~s 1077 (1170)
.++|..
T Consensus 287 ~~~~~~ 292 (324)
T cd05589 287 VSNFDE 292 (324)
T ss_pred hhhcCc
Confidence 444443
No 47
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.1e-47 Score=418.81 Aligned_cols=281 Identities=39% Similarity=0.784 Sum_probs=240.2
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNI-LISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieI-LskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|+++.+|+.||+|++.+...........+..|..+ ++.++||||++++++|...+.+|+||||+.|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 369999999999999999999999999987644444445566666654 6779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~------------- 147 (325)
T cd05604 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGI------------- 147 (325)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCC-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+..++++.+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~ 210 (325)
T cd05604 148 -----------------AQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH 210 (325)
T ss_pred -----------------CCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence 001112346799999999999999999999999999999999999999999999999998887
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh-hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA-TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa-~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s 1077 (1170)
.....+ ...+..+.++|.+||+.||.+||++ ..+.++++||||..++|..+... .+++.|...+ .+.++|+.
T Consensus 211 ~~~~~~---~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05604 211 KPLVLR---PGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTDLEQKKIPPPFNPNVEGPDDISNFDA 286 (325)
T ss_pred CCccCC---CCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCcCCCcchhhhcCC
Confidence 765544 4689999999999999999999995 36789999999999999987765 4556665544 45555554
No 48
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.8e-47 Score=417.93 Aligned_cols=282 Identities=42% Similarity=0.817 Sum_probs=240.6
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNI-LISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieI-LskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|+++.+|+.||||++.+...........+..|..+ ++.++||||+++++.|...+.+|+||||++|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 369999999999999999999999999987654444445566666664 5779999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~------------- 147 (323)
T cd05575 81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGI------------- 147 (323)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccc-------------
Confidence 9999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+++..+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~ 210 (323)
T cd05575 148 -----------------EHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN 210 (323)
T ss_pred -----------------cCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence 001112345799999999999999999999999999999999999999999999999998887
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh-hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCccccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA-TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSR 1078 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa-~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~ 1078 (1170)
.....+ ..++..+.+||.+||+.||.+|+++ ....++++||||..++|..+... .+++.|.... .+...|+..
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (323)
T cd05575 211 KPLRLK---PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDDLVNKKITPPFNPNVSGPMDLKHFDPE 287 (323)
T ss_pred CCCCCC---CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHHHhhccCCCCcCCCCCCcchhhhcCcc
Confidence 766544 5689999999999999999999995 35689999999999999988755 4566665443 445555443
No 49
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.2e-47 Score=417.82 Aligned_cols=281 Identities=37% Similarity=0.742 Sum_probs=235.7
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||.||+|+++.+++.||||++++...........+..|..++..+ +||||++++++|.+...+||||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999999999999999999876554555667788999999988 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~------------- 147 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGI------------- 147 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccc-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987311
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC---------CH
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK---------TP 993 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~---------~~ 993 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||... ..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~ 210 (329)
T cd05588 148 -----------------RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTE 210 (329)
T ss_pred -----------------cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccch
Confidence 0011223468999999999999999999999999999999999999999631 12
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh---hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA---TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAE 1068 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa---~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~ 1068 (1170)
..+++.+......+| ..++.++.+||.+||+.||.+|+++ .++.++++||||..++|..+... .+++.|...
T Consensus 211 ~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~~~~~~~~~~~~~~~~~~ 287 (329)
T cd05588 211 DYLFQVILEKQIRIP---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIE 287 (329)
T ss_pred HHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHhCCCCCCccccCC
Confidence 335556666655544 6789999999999999999999984 24889999999999999987654 344555443
Q ss_pred C-CCCCcccc
Q 001057 1069 S-LDTSYFVS 1077 (1170)
Q Consensus 1069 s-lDts~F~s 1077 (1170)
. .+..+|..
T Consensus 288 ~~~~~~~~~~ 297 (329)
T cd05588 288 SDRDLDNFDP 297 (329)
T ss_pred CcchhhhcCC
Confidence 3 33344443
No 50
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9.8e-47 Score=415.41 Aligned_cols=279 Identities=39% Similarity=0.766 Sum_probs=236.9
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILsk-L~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||.||+|+++.+|+.||+|++++..............|..++.. ++||||++++++|.+.+++|+||||+.|
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 469999999999999999999999999987544333455667778888875 4899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~------------- 147 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENV------------- 147 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecc-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999986310
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..++++.+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~ 210 (316)
T cd05620 148 -----------------FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV 210 (316)
T ss_pred -----------------cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 000112346799999999999999999999999999999999999999999998888888876
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s 1077 (1170)
....+| ..++.++++||.+||+.||.+|+++ +.++++||||..++|..+... .+++.|.... .+..+|..
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~l~~dP~~R~~~--~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (316)
T cd05620 211 DTPHYP---RWITKESKDILEKLFERDPTRRLGV--VGNIRGHPFFKTINWTALEKRELDPPFKPKVKSPSDYSNFDR 283 (316)
T ss_pred CCCCCC---CCCCHHHHHHHHHHccCCHHHcCCC--hHHHHcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 655444 6789999999999999999999983 357999999999999987654 4555555443 34444443
No 51
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-48 Score=447.86 Aligned_cols=261 Identities=33% Similarity=0.596 Sum_probs=242.2
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
.++-|++.+.||.|+.|.|.+|++..||+.+|||++.+...........+.+|+-||+.+.||||++||+++.+..++|+
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lyl 89 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYL 89 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEE
Confidence 45679999999999999999999999999999999988754555566788899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|+||++||.|++++-+.++|++.+++.|+.||+.|+.|||..+|+||||||+|+|||..+.|||+|||+|..-
T Consensus 90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe------- 162 (786)
T KOG0588|consen 90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE------- 162 (786)
T ss_pred EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999752
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCC-CcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGH-GATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
..+....+.||+|.|.|||++.|..| +.++||||.|||||.||+|..||.+++..
T Consensus 163 ------------------------~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir 218 (786)
T KOG0588|consen 163 ------------------------VPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR 218 (786)
T ss_pred ------------------------cCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH
Confidence 22344567899999999999999887 78899999999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW 1053 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw 1053 (1170)
.++.++..+.+..| ..++.++++||.+||..||.+|++ .+||++|||+.+..-
T Consensus 219 ~LLlKV~~G~f~MP---s~Is~eaQdLLr~ml~VDp~~RiT---~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 219 VLLLKVQRGVFEMP---SNISSEAQDLLRRMLDVDPSTRIT---TEEILKHPFLSGYTS 271 (786)
T ss_pred HHHHHHHcCcccCC---CcCCHHHHHHHHHHhccCcccccc---HHHHhhCchhhcCCC
Confidence 99999999999766 789999999999999999999999 789999999988653
No 52
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-46 Score=414.13 Aligned_cols=283 Identities=40% Similarity=0.811 Sum_probs=243.2
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|++..+++.||||++.+...........+..|..++..+ +||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999999999999999999876554555667778899999887 699999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++.+.+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~------------- 147 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGI------------- 147 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecC-------------
Confidence 9999999988889999999999999999999999999999999999999999999999999986421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...++..+..
T Consensus 148 -----------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~ 210 (318)
T cd05570 148 -----------------LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE 210 (318)
T ss_pred -----------------cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence 001112345799999999999999999999999999999999999999999999888888887
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s 1077 (1170)
....+| ..++.++.+||.+||+.||.+||++ ..+.+++.||||+.++|..+... .+++.|.... .+..+|+.
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (318)
T cd05570 211 DEVRYP---RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDKLERKEIKPPFKPKIKGRFDVSNFDD 287 (318)
T ss_pred CCCCCC---CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHHHHhCCCCCCcCCCCCCcchhhhcCc
Confidence 776555 5789999999999999999999993 22389999999999999877654 4556665544 45555554
Q ss_pred cc
Q 001057 1078 RY 1079 (1170)
Q Consensus 1078 ~~ 1079 (1170)
.+
T Consensus 288 ~~ 289 (318)
T cd05570 288 EF 289 (318)
T ss_pred hh
Confidence 43
No 53
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.1e-46 Score=415.58 Aligned_cols=282 Identities=39% Similarity=0.770 Sum_probs=240.8
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILIS-VRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILsk-L~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|++..+++.||||++++..............|..++.. ++||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 369999999999999999999999999987543333445567778888876 5899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------ 148 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML------------ 148 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC------------
Confidence 99999998878899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..++++.+..
T Consensus 149 ------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~ 210 (316)
T cd05619 149 ------------------GDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM 210 (316)
T ss_pred ------------------CCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 00112345799999999999998999999999999999999999999999998888888776
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVSRY 1079 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s~~ 1079 (1170)
....+| ..++.++++||.+||+.||.+|+++ ..++++||||+.++|..+... .+++.|...+ .+.++|+..+
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~--~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd05619 211 DNPCYP---RWLTREAKDILVKLFVREPERRLGV--KGDIRQHPFFREIDWSALEEREIEPPFKPKVKSANDCSNFDKEF 285 (316)
T ss_pred CCCCCC---ccCCHHHHHHHHHHhccCHhhcCCC--hHHHHcCcccCCCCHHHHHhCCCCCCcCCCCCCccchhhcChhh
Confidence 554443 5789999999999999999999993 248999999999999987655 5677776655 5666776654
Q ss_pred c
Q 001057 1080 V 1080 (1170)
Q Consensus 1080 ~ 1080 (1170)
.
T Consensus 286 ~ 286 (316)
T cd05619 286 L 286 (316)
T ss_pred h
Confidence 3
No 54
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.9e-47 Score=415.74 Aligned_cols=286 Identities=41% Similarity=0.747 Sum_probs=244.9
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||+|+||+||+|+++.+|+.||||++.+...........+.+|+.++..++||||++++++|.+.+.+||||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765544556677889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||++||+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|.....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~------ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA------ 154 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC------
Confidence 999999999999876 6799999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh------cCCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL------GMGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~------g~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.........+||+.|+|||++. +..++.++|||||||++|+|++|..||.+
T Consensus 155 -----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 155 -----------------------NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred -----------------------CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 0000122347999999999997 45678899999999999999999999999
Q ss_pred CCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCC
Q 001057 991 KTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAE 1068 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~ 1068 (1170)
.+....+..+.... ..+|. ...++.++.+||.+||+ ||.+|++ +.++++||||..++|..+....+++.|...
T Consensus 212 ~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~li~~ll~-~p~~R~t---~~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 286 (330)
T cd05601 212 GTSAKTYNNIMNFQRFLKFPE-DPKVSSDFLDLIQSLLC-GQKERLG---YEGLCCHPFFSKIDWNNIRNSLPPFVPTLK 286 (330)
T ss_pred CCHHHHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-ChhhCCC---HHHHhCCCCcCCCCHHHHhhCCCCccCcCC
Confidence 88888888887643 33342 23589999999999998 9999999 889999999999999998877777777665
Q ss_pred C-CCCCcccc
Q 001057 1069 S-LDTSYFVS 1077 (1170)
Q Consensus 1069 s-lDts~F~s 1077 (1170)
. .+..+|..
T Consensus 287 ~~~~~~~~~~ 296 (330)
T cd05601 287 SDDDTSNFDE 296 (330)
T ss_pred CcchhhhcCC
Confidence 5 34445543
No 55
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-46 Score=413.19 Aligned_cols=278 Identities=45% Similarity=0.845 Sum_probs=232.9
Q ss_pred CeEEEEEeccCCCeEEEEeeec---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccce
Q 001057 759 DFEIIKPISQGAFGRVFLARKR---ATGDLFAIKVLKKADMI-RKNAVESILAERNILISVR-NPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk---~TGe~VAIKvLkKs~i~-~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~L 833 (1170)
+|++++.||+|+||+||+|++. .+++.||+|++.+.... .....+.+..|+.+|..++ ||||++++++|...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999864 57899999999865432 2334567888999999995 89999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+.||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~--- 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS--- 157 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccc---
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCC-
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAK- 991 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~- 991 (1170)
.........+||+.|||||++.+. .++.++|||||||++|||++|..||...
T Consensus 158 --------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 211 (332)
T cd05614 158 --------------------------EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEG 211 (332)
T ss_pred --------------------------cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCC
Confidence 001122346799999999999875 4788999999999999999999999643
Q ss_pred ---CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh--hHHHHHcCCCCCCCChhhhhhc--cCCCC
Q 001057 992 ---TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT--GAREVKQHPFFKNINWDTLARQ--KAMFI 1064 (1170)
Q Consensus 992 ---~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~--~AeEILqHPfF~~idwe~L~~~--~ppfi 1064 (1170)
....+...+......+ +..++..+.+||.+||+.||.+|+++. .++++++||||++.+|..+... .+++.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~ 288 (332)
T cd05614 212 ERNTQSEVSRRILKCDPPF---PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLDWEALALRKVNPPFR 288 (332)
T ss_pred CCCCHHHHHHHHhcCCCCC---CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCcC
Confidence 3344555555554443 367899999999999999999999765 6999999999999999987654 44555
Q ss_pred CCCC
Q 001057 1065 PAAE 1068 (1170)
Q Consensus 1065 P~~~ 1068 (1170)
|...
T Consensus 289 ~~~~ 292 (332)
T cd05614 289 PSIR 292 (332)
T ss_pred CCCC
Confidence 5443
No 56
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.7e-46 Score=411.08 Aligned_cols=270 Identities=43% Similarity=0.849 Sum_probs=233.3
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERN-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~Eie-ILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||.||+|++..+++.||+|++.+...........+..|+. +++.++||||++++++|.+.+.+|+||||++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998765444444555666655 57889999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++.....+++..++.++.||+.||.|||++||+||||||+||||+.+|.+||+|||+++...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~------------- 147 (321)
T cd05603 81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGV------------- 147 (321)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCC-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987411
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+...++..+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 210 (321)
T cd05603 148 -----------------EPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210 (321)
T ss_pred -----------------CCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence 000112345799999999999998899999999999999999999999999998888888887
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh-hhHHHHHcCCCCCCCChhhhhhc--cCCCCCC
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA-TGAREVKQHPFFKNINWDTLARQ--KAMFIPA 1066 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa-~~AeEILqHPfF~~idwe~L~~~--~ppfiP~ 1066 (1170)
....+| ...+..+.++|.+||+.||.+|+++ ..+.++++||||..++|..+... .+++.|.
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (321)
T cd05603 211 KPLQLP---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDDLYHKRITPPYNPN 274 (321)
T ss_pred CCCCCC---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHHHhcCCCCCCcCCC
Confidence 766554 5788999999999999999999984 46789999999999999987654 3444443
No 57
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.9e-46 Score=414.15 Aligned_cols=289 Identities=41% Similarity=0.780 Sum_probs=243.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||+||+++++.+++.||+|++.+...........+.+|+.++..++||||++++++|.+.+++|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998765555556677889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+.||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|.....
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------ 154 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA------ 154 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC------
Confidence 99999999999976 45799999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........+||+.|||||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 155 -----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 155 -----------------------DGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred -----------------------CCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 00001123469999999999974 34788999999999999999999999998
Q ss_pred CHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC
Q 001057 992 TPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES 1069 (1170)
Q Consensus 992 ~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s 1069 (1170)
+..+.+..+.... ..++.....++..+++||.+||+. |.+|++..++.++++||||.+++|..+....++++|...+
T Consensus 212 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~-~~~r~~r~~~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~ 290 (331)
T cd05597 212 SLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRNGLQDFKDHPFFEGIDWDNIRNSTAPYVPEVSS 290 (331)
T ss_pred CHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccC-cccccCCCCHHHHhcCCCCCCCCHHHHhhCCCCccCcCCC
Confidence 8888888887543 334433346899999999999985 5666555559999999999999999988777777776544
Q ss_pred -CCCCccc
Q 001057 1070 -LDTSYFV 1076 (1170)
Q Consensus 1070 -lDts~F~ 1076 (1170)
.++.+|+
T Consensus 291 ~~~~~~~~ 298 (331)
T cd05597 291 PTDTSNFD 298 (331)
T ss_pred cchhhhcC
Confidence 4444443
No 58
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.3e-46 Score=413.39 Aligned_cols=282 Identities=40% Similarity=0.770 Sum_probs=240.9
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|+++++||+|+||+||+++++.+++.||+|++.+...........+..|+.++..++|+||++++++|.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999998755445555667888999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+.||+|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~------ 154 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME------ 154 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc------
Confidence 99999999999987 36799999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........+||+.|||||++.+ ..++.++|||||||++|||++|..||.+.
T Consensus 155 -----------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~ 211 (332)
T cd05623 155 -----------------------DGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (332)
T ss_pred -----------------------CCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC
Confidence 00011223579999999999973 45788999999999999999999999999
Q ss_pred CHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC
Q 001057 992 TPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES 1069 (1170)
Q Consensus 992 ~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s 1069 (1170)
+..+.+..+.... ..+|.....++.++++||.+||+.+ .+|++..++.++++||||.+++|+.+....++++|...+
T Consensus 212 ~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~-~~r~~r~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~~~ 290 (332)
T cd05623 212 SLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSR-EHRLGQNGIEDFKQHPFFTGIDWDNIRNCEAPYIPEVSS 290 (332)
T ss_pred CHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccCh-hhhcCCCCHHHHhCCCCcCCCCHHHHhhCCCCccCCCCC
Confidence 9988888887654 3445444578999999999999864 455544459999999999999999998877777776543
No 59
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.9e-46 Score=414.41 Aligned_cols=280 Identities=37% Similarity=0.748 Sum_probs=234.7
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|+++.+++.||+|++.+...........+..|+.++.++ +||||++++++|.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3699999999999999999999999999876554555667788899998776 799999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~------------- 147 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL------------- 147 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCcccccc-------------
Confidence 9999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC---------CCH
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA---------KTP 993 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g---------~~~ 993 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||.. ...
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~ 210 (329)
T cd05618 148 -----------------RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTE 210 (329)
T ss_pred -----------------CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccH
Confidence 000112346799999999999999999999999999999999999999952 122
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh---hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA---TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAE 1068 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa---~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~ 1068 (1170)
..+.+.+......+| ..++..+.+||.+||+.||.+|+++ .++.++++||||++++|+.+... .+++.|...
T Consensus 211 ~~~~~~i~~~~~~~p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~~~~~~~~ 287 (329)
T cd05618 211 DYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDLMEQKQVVPPFKPNIS 287 (329)
T ss_pred HHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCHHHHHcCCCCcCccCCCC
Confidence 334555666655544 6789999999999999999999984 24689999999999999987654 455555543
Q ss_pred C-CCCCccc
Q 001057 1069 S-LDTSYFV 1076 (1170)
Q Consensus 1069 s-lDts~F~ 1076 (1170)
. .+..+|.
T Consensus 288 ~~~~~~~~~ 296 (329)
T cd05618 288 GEFGLDNFD 296 (329)
T ss_pred CcccchhcC
Confidence 3 3333443
No 60
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.7e-46 Score=413.96 Aligned_cols=281 Identities=41% Similarity=0.791 Sum_probs=236.4
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHH-HHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERN-ILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~Eie-ILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||+|+||+||+|+++.+++.||+|++.+...........+..|.. ++..++||||++++++|...+.+|+||||++|
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998755433344445555554 46789999999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~------------- 147 (325)
T cd05602 81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI------------- 147 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccc-------------
Confidence 9999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
.........+||+.|||||++.+..++.++|||||||++|+|++|.+||.+.+..+++..+..
T Consensus 148 -----------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~ 210 (325)
T cd05602 148 -----------------EHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 210 (325)
T ss_pred -----------------cCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence 001112346799999999999999999999999999999999999999999999999888887
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh-hHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcccc
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT-GAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYFVS 1077 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~-~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F~s 1077 (1170)
....++ ..++..+.+||.+||+.||.+|+++. ...++++|+||..++|+.+... .+++.|.... .+...|+.
T Consensus 211 ~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
T cd05602 211 KPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDDLINKKITPPFNPNVSGPNDLRHFDP 286 (325)
T ss_pred CCcCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHHHHhCCCCcCcCCCCCCcchhhhcCC
Confidence 665543 57899999999999999999999953 5779999999999999988654 3444444333 33344443
No 61
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.6e-46 Score=414.57 Aligned_cols=282 Identities=40% Similarity=0.750 Sum_probs=241.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||+||+++++.+++.||+|++.+...........+.+|+.++..++|+||++++++|.+.+.+||||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998755444555667888999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||++||+|..++.. ...+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD----- 155 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC-----
Confidence 99999999999987 467999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
........+||+.|||||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 156 ------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~ 211 (331)
T cd05624 156 ------------------------GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ------------------------CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence 0001123579999999999976 45788999999999999999999999999
Q ss_pred CHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC
Q 001057 992 TPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES 1069 (1170)
Q Consensus 992 ~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s 1069 (1170)
+..+.+..+.... .++|.....++.++++||.+||+.+ .+|++..+++++++||||++++|+.+....++++|....
T Consensus 212 ~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~-~~~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~p~~~~ 290 (331)
T cd05624 212 SLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSR-ERRLGQNGIEDFKKHAFFEGIDWENIRNLEAPYIPDVSS 290 (331)
T ss_pred CHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCc-hhhcCCCCHHHHhcCCCcCCCCHHHHhhCCCCccCCCCC
Confidence 8888888887644 3444433467999999999999965 466655569999999999999999998777788776543
No 62
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=5.7e-46 Score=420.32 Aligned_cols=283 Identities=42% Similarity=0.767 Sum_probs=239.7
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
....++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.++..++||||++++++|.+...+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 45568999999999999999999999999999999999876554555566788999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||++||+|..++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~--- 194 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK--- 194 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc---
Confidence 9999999999999998764 589999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC----CCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG----HGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.........+||+.|||||++.+.. ++.++|||||||++|||++|.+||.
T Consensus 195 --------------------------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~ 248 (371)
T cd05622 195 --------------------------EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (371)
T ss_pred --------------------------CCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCC
Confidence 0001123567999999999997643 7889999999999999999999999
Q ss_pred CCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh--hhhhhccCCCCC
Q 001057 990 AKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW--DTLARQKAMFIP 1065 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw--e~L~~~~ppfiP 1065 (1170)
+.+....+..|+... ..+|. ...++.++++||.+||. +|..|++..++.++++||||++.+| +.+....++++|
T Consensus 249 ~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~h~~~~~~~~~~~~~~~~~~~~~~ 326 (371)
T cd05622 249 ADSLVGTYSKIMNHKNSLTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVP 326 (371)
T ss_pred CCCHHHHHHHHHcCCCcccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhcCcccCCCChhHHhcCCCCCCCCC
Confidence 999988898888644 34442 24689999999999998 7777776666999999999998655 444444566666
Q ss_pred CCC
Q 001057 1066 AAE 1068 (1170)
Q Consensus 1066 ~~~ 1068 (1170)
...
T Consensus 327 ~~~ 329 (371)
T cd05622 327 DLS 329 (371)
T ss_pred CCC
Confidence 543
No 63
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.4e-46 Score=411.79 Aligned_cols=264 Identities=45% Similarity=0.863 Sum_probs=230.9
Q ss_pred EEEeccCCCeEEEEeeec---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 763 IKPISQGAFGRVFLARKR---ATGDLFAIKVLKKADMI-RKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk---~TGe~VAIKvLkKs~i~-~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
++.||+|+||.||+|++. .+++.||+|++.+.... .......+.+|+.+|..++||||++++++|...+.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999864 57899999999875432 22344567889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+.||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++...
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~--------- 151 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESI--------- 151 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecc---------
Confidence 99999999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
.........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+....+.
T Consensus 152 ---------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~ 210 (323)
T cd05584 152 ---------------------HEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTID 210 (323)
T ss_pred ---------------------cCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 00111234579999999999999889999999999999999999999999999888888
Q ss_pred HHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChhhhhhc
Q 001057 999 NIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 999 kIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
.+..+...+| ..+++.+.+||.+||+.||.+|++ ...+.++++||||...+|..+...
T Consensus 211 ~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~~~~~~ 270 (323)
T cd05584 211 KILKGKLNLP---PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWDDLLAR 270 (323)
T ss_pred HHHcCCCCCC---CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHHHHhcC
Confidence 8888776554 678999999999999999999994 234899999999999999887654
No 64
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.9e-46 Score=421.07 Aligned_cols=289 Identities=41% Similarity=0.731 Sum_probs=242.0
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
....++|++++.||+|+||+||+|+++.+++.||+|++.+...........+.+|+.++..++||||++++++|.+...+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 35567899999999999999999999999999999999876544455556788999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||++||+|..++... .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~--- 194 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA--- 194 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC---
Confidence 9999999999999998764 689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC----CCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM----GHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~----~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.........+||+.|||||++.+. .++.++|||||||++|||++|.+||.
T Consensus 195 --------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 248 (370)
T cd05596 195 --------------------------NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY 248 (370)
T ss_pred --------------------------CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence 000112346799999999999754 37889999999999999999999999
Q ss_pred CCCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCC--CCChhhHHHHHcCCCCCCCChhhhh--hccCCC
Q 001057 990 AKTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQ--RLGATGAREVKQHPFFKNINWDTLA--RQKAMF 1063 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPsk--RpSa~~AeEILqHPfF~~idwe~L~--~~~ppf 1063 (1170)
+.+....+..|.... +.+|. ...++.++++||.+||+.+|.+ |++ +.++++||||++.+|.... ...+++
T Consensus 249 ~~~~~~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s---~~ell~h~~~~~~~~~~~~~~~~~~~~ 324 (370)
T cd05596 249 ADSLVGTYSKIMDHKNSLTFPD-DIEISKQAKDLICAFLTDREVRLGRNG---VDEIKSHPFFKNDQWTFDNIRETVAPV 324 (370)
T ss_pred CCCHHHHHHHHHcCCCcCCCCC-cCCCCHHHHHHHHHHccChhhccCCCC---HHHHhcCcccCCCChhhHHhcCCCcCc
Confidence 999888888887654 33442 1357999999999999988877 877 8999999999998887543 335566
Q ss_pred CCCCCC-CCCCccc
Q 001057 1064 IPAAES-LDTSYFV 1076 (1170)
Q Consensus 1064 iP~~~s-lDts~F~ 1076 (1170)
+|.... .++.+|+
T Consensus 325 ~p~~~~~~~~~~~~ 338 (370)
T cd05596 325 VPELSSDIDTSNFD 338 (370)
T ss_pred cCcCCCcchhhhcC
Confidence 666544 4444443
No 65
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.1e-46 Score=420.30 Aligned_cols=290 Identities=41% Similarity=0.746 Sum_probs=238.6
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
...++|++++.||+|+||.||+|+++.+++.||+|++.+...........+.+|+.++..++||||++++++|.+...+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 44578999999999999999999999999999999998765544555667889999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
+||||++||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus 120 lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~---- 194 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE---- 194 (370)
T ss_pred EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceeccc----
Confidence 999999999999999764 689999999999999999999999999999999999999999999999999974210
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC----CCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG----HGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.......+.+||+.|||||++.+.. ++.++|||||||++|+|++|.+||.+
T Consensus 195 -------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 195 -------------------------TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred -------------------------CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 0001123567999999999998643 78899999999999999999999999
Q ss_pred CCHHHHHHHHhccC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhh--hhhccCCCCCC
Q 001057 991 KTPQQIFDNIMNRD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDT--LARQKAMFIPA 1066 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~--L~~~~ppfiP~ 1066 (1170)
.+....+..|.... +.+|. ...++..+++||.+||+ ++.+|++..++.++++||||+...|.. +....+++.|.
T Consensus 250 ~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~~L~-~~~~r~~R~~~~e~l~hp~~~~~~~~~~~~~~~~~~~~p~ 327 (370)
T cd05621 250 DSLVGTYSKIMDHKNSLNFPE-DVEISKHAKNLICAFLT-DREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPE 327 (370)
T ss_pred CCHHHHHHHHHhCCcccCCCC-cccCCHHHHHHHHHHcc-CchhccCCCCHHHHhcCcccCCCCcChHhcCCCCCCcCCC
Confidence 99888888887644 34442 13579999999999998 444444333489999999999866653 33335666666
Q ss_pred CCC-CCCCccc
Q 001057 1067 AES-LDTSYFV 1076 (1170)
Q Consensus 1067 ~~s-lDts~F~ 1076 (1170)
..+ .+..+|+
T Consensus 328 ~~~~~~~~~~~ 338 (370)
T cd05621 328 LSSDIDSSNFD 338 (370)
T ss_pred CCCcchhhhcC
Confidence 544 3444443
No 66
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-47 Score=439.43 Aligned_cols=257 Identities=35% Similarity=0.637 Sum_probs=237.2
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+++|.+...||+|+||+||+|+.+.|.+.||||++.|... ....+..+.+|++|++.++|||||.++++|+...++++|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 3689999999999999999999999999999999988653 345678899999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
.|||.| +|+.+|...+.++|+.++.++++++.||.|||+++|+|||+||.|||++..|++|+||||+|+...
T Consensus 80 te~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~------- 151 (808)
T KOG0597|consen 80 TEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS------- 151 (808)
T ss_pred ehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc-------
Confidence 999976 999999999999999999999999999999999999999999999999999999999999998521
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.......++-|||.|||||++.+..|+..+|+||||||+|||++|+|||......++
T Consensus 152 -----------------------~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~L 208 (808)
T KOG0597|consen 152 -----------------------TNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQL 208 (808)
T ss_pred -----------------------cCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHH
Confidence 122334567899999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...|......|| ..++..+.+||..+|.+||.+|++ .-+++.|||.++-
T Consensus 209 v~~I~~d~v~~p---~~~S~~f~nfl~gLL~kdP~~Rlt---W~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 209 VKSILKDPVKPP---STASSSFVNFLQGLLIKDPAQRLT---WTDLLGHPFWKGK 257 (808)
T ss_pred HHHHhcCCCCCc---ccccHHHHHHHHHHhhcChhhccc---HHHHhcChHHhhh
Confidence 999999999888 589999999999999999999999 5688999998753
No 67
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.2e-46 Score=411.28 Aligned_cols=270 Identities=44% Similarity=0.822 Sum_probs=235.3
Q ss_pred EEeccCCCeEEEEeee---cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeec
Q 001057 764 KPISQGAFGRVFLARK---RATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYL 840 (1170)
Q Consensus 764 k~LG~GgFGtVyLArd---k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~ 840 (1170)
+.||+|+||.||++++ ..+|+.||+|++.+... .......+..|+.+|.+++||||++++++|.+.+.+|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999986 35789999999987543 2233456778999999999999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCC
Q 001057 841 NGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPS 920 (1170)
Q Consensus 841 ~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~s 920 (1170)
.+|+|.+++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~----------- 149 (318)
T cd05582 81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI----------- 149 (318)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccC-----------
Confidence 999999999888889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 001057 921 LGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNI 1000 (1170)
Q Consensus 921 l~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkI 1000 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+
T Consensus 150 -------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i 210 (318)
T cd05582 150 -------------------DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMI 210 (318)
T ss_pred -------------------CCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHH
Confidence 0011223467999999999999988999999999999999999999999999998888888
Q ss_pred hccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhh--HHHHHcCCCCCCCChhhhhhc--cCCCCCCC
Q 001057 1001 MNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATG--AREVKQHPFFKNINWDTLARQ--KAMFIPAA 1067 (1170)
Q Consensus 1001 l~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~--AeEILqHPfF~~idwe~L~~~--~ppfiP~~ 1067 (1170)
......+| ..++..+.+||.+||+.||.+||++.+ +.+++.||||..++|..+... .+++.|..
T Consensus 211 ~~~~~~~p---~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (318)
T cd05582 211 LKAKLGMP---QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWNKLYRREIKPPFKPAV 278 (318)
T ss_pred HcCCCCCC---CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHHHHHhcCCCCCcCCCC
Confidence 87776554 678999999999999999999999766 899999999999999987754 34444443
No 68
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.7e-48 Score=416.13 Aligned_cols=250 Identities=30% Similarity=0.551 Sum_probs=226.0
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEe-eeeccc
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFY-SFTCRE 831 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~-~Fqd~~ 831 (1170)
......+|+++++||+|+||+||++++..+|+.+|.|.+. -...+..+.+.+..|+.+|++|+|||||++|+ .|..+.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~-f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ 92 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQ-FGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN 92 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcc-hhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence 3556778999999999999999999999999999999988 44567778889999999999999999999998 666666
Q ss_pred c-eEEEEeeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CC--eeeccCCCCcEEeCCCCcEEEEec
Q 001057 832 N-LYLVMEYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHS--LN--VIHRDLKPDNLLIGQDGHIKLTDF 902 (1170)
Q Consensus 832 ~-LyLVMEY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs--~G--IIHRDIKPENILLd~dG~VKLsDF 902 (1170)
. ++||||||.+|||...|+.. ..++|..++.|+.|++.||.+||+ .. |+||||||.||+|+.+|.|||+||
T Consensus 93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf 172 (375)
T KOG0591|consen 93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF 172 (375)
T ss_pred hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence 5 99999999999999999643 569999999999999999999998 44 999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELL 982 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 982 (1170)
||++.+. .......+.+|||.||+||++.+.+|++++|||||||++|||+
T Consensus 173 GL~r~l~------------------------------s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMc 222 (375)
T KOG0591|consen 173 GLGRFLS------------------------------SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMC 222 (375)
T ss_pred hhHhHhc------------------------------chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence 9999641 2334567899999999999999999999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHhccCCCCCCCC-ccCCHHHHHHHHHhccCCCCCCCC
Q 001057 983 IGIPPFNAKTPQQIFDNIMNRDIPWPNIP-EEMSVEACDLIDKLLTENPVQRLG 1035 (1170)
Q Consensus 983 TG~pPF~g~~~~ei~qkIl~~~l~fP~ip-~~lS~eakDLIkkLLq~DPskRpS 1035 (1170)
.-++||+|++..++.++|.++++ |.+| ...|.++..||..|++.||..||+
T Consensus 223 aL~~PF~g~n~~~L~~KI~qgd~--~~~p~~~YS~~l~~li~~ci~vd~~~RP~ 274 (375)
T KOG0591|consen 223 ALQSPFYGDNLLSLCKKIEQGDY--PPLPDEHYSTDLRELINMCIAVDPEQRPD 274 (375)
T ss_pred hcCCCcccccHHHHHHHHHcCCC--CCCcHHHhhhHHHHHHHHHccCCcccCCC
Confidence 99999999999999999999865 4555 578999999999999999999998
No 69
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.6e-47 Score=413.10 Aligned_cols=260 Identities=28% Similarity=0.498 Sum_probs=221.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
++.|+.+.++|+|+||+||+|+++.||+.||||.+..+. .+....+-.++|+.+|++++|||+|.|.++|.....++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 367999999999999999999999999999999987653 2344556678999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
+|||.. ++.+.|.+. ..++++.++.|+.|++.|+.|||++++||||||||||||+.+|.+||||||+|+...
T Consensus 80 FE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~------ 152 (396)
T KOG0593|consen 80 FEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLS------ 152 (396)
T ss_pred eeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhc------
Confidence 999965 566666554 569999999999999999999999999999999999999999999999999999631
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
..+.....++.|.||+|||.+.| ..|+.++||||+||++.||++|.+.|.|.+.-
T Consensus 153 ------------------------~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi 208 (396)
T KOG0593|consen 153 ------------------------APGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI 208 (396)
T ss_pred ------------------------CCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH
Confidence 11223345788999999999998 67999999999999999999999999999887
Q ss_pred HHHHHHhcc-------------------CCCCCCCC---------ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCC
Q 001057 995 QIFDNIMNR-------------------DIPWPNIP---------EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHP 1046 (1170)
Q Consensus 995 ei~qkIl~~-------------------~l~fP~ip---------~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHP 1046 (1170)
+++..|... .+.+|..+ ..++.-+.||+++||..||.+|++ .+++|.||
T Consensus 209 DQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~s---c~qll~H~ 285 (396)
T KOG0593|consen 209 DQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLS---CEQLLHHP 285 (396)
T ss_pred HHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccccc---HHHHhcCh
Confidence 766666531 11122211 256778999999999999999999 88999999
Q ss_pred CCCCC
Q 001057 1047 FFKNI 1051 (1170)
Q Consensus 1047 fF~~i 1051 (1170)
||.++
T Consensus 286 yFd~~ 290 (396)
T KOG0593|consen 286 YFDGF 290 (396)
T ss_pred HHHHH
Confidence 99654
No 70
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-47 Score=403.21 Aligned_cols=261 Identities=37% Similarity=0.713 Sum_probs=245.1
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
.....+++|++.+.||+|-||.||+|+.+.++-.||+|++.|+++.......++.+|++|.+.|+||||+++|++|-+..
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ 95 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK 95 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc
Confidence 45788899999999999999999999999999999999999998877777788999999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLR--NLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk--~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
.+||++||..+|+|+..|+ ....|++..+..|++|++.||.|+|.++||||||||+|+|++.+|.+||+|||.+...
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~- 174 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHA- 174 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeec-
Confidence 9999999999999999999 6678999999999999999999999999999999999999999999999999998641
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
...+..+.|||..|.+||+..+..++..+|+|++|++.||+|.|.+||.
T Consensus 175 -------------------------------p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFe 223 (281)
T KOG0580|consen 175 -------------------------------PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFE 223 (281)
T ss_pred -------------------------------CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchh
Confidence 1234568899999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 990 AKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
..+..++|+.|..-++.+| ..++.++.|||.+||.++|.+|+. ..|++.|||...
T Consensus 224 s~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~---l~~v~~hpwI~a 278 (281)
T KOG0580|consen 224 SQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERLA---LTEVMDHPWIVA 278 (281)
T ss_pred hhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCcccccc---HHHHhhhHHHHh
Confidence 9999999999999999887 789999999999999999999998 889999999864
No 71
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-46 Score=425.00 Aligned_cols=270 Identities=37% Similarity=0.654 Sum_probs=231.1
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHH-----------HHHHHHHHHHHHHhcCCCcE
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKN-----------AVESILAERNILISVRNPFV 820 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~-----------~ve~~l~EieILskL~HPNI 820 (1170)
.....+++|++++.||+|.||.|-+|++..+++.||||++.|....... .++.+.+|+.||++++||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 3456789999999999999999999999999999999999875433221 24689999999999999999
Q ss_pred EEEEeeeecc--cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEE
Q 001057 821 VRFFYSFTCR--ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 821 VrL~~~Fqd~--~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VK 898 (1170)
|+|+++..+. +.+|||+|||..|.+...-.....+++.+++.|++.++.||+|||.+|||||||||+|+||+.+|+||
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 9999998775 57999999999998766444433499999999999999999999999999999999999999999999
Q ss_pred EEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC----CCcchhhhHH
Q 001057 899 LTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG----HGATADWWSV 974 (1170)
Q Consensus 899 LsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSL 974 (1170)
|+|||.+..... + . ...........+|||.|||||.+.+.. .+.+.|||||
T Consensus 251 IsDFGVs~~~~~-------------~-~-----------~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWal 305 (576)
T KOG0585|consen 251 ISDFGVSNEFPQ-------------G-S-----------DEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWAL 305 (576)
T ss_pred eeccceeeeccc-------------C-C-----------ccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhh
Confidence 999999874210 0 0 001111223378999999999998732 3678899999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 975 GIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 975 GVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
||+||.|+.|+.||.+....+++.+|++..+.||..+ .+..+++|||.+||++||.+|++ +.+|+.|||...
T Consensus 306 GVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~p-e~~e~~kDli~~lL~KdP~~Ri~---l~~ik~Hpwvt~ 377 (576)
T KOG0585|consen 306 GVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENP-EINEDLKDLIKRLLEKDPEQRIT---LPDIKLHPWVTR 377 (576)
T ss_pred hhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcc-cccHHHHHHHHHHhhcChhheee---hhhheecceecc
Confidence 9999999999999999999999999999999999654 68999999999999999999999 889999999864
No 72
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.8e-45 Score=396.07 Aligned_cols=273 Identities=34% Similarity=0.600 Sum_probs=231.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|++.+.||+|+||+||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++.|...+.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48999999999999999999999999999999976544344445567889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+.||+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~------- 153 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIP------- 153 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecC-------
Confidence 99999999888654 459999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
........+||+.|+|||++.+..++.++||||+||++|+|++|..||.+.+....
T Consensus 154 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~ 209 (285)
T cd05605 154 ------------------------EGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK 209 (285)
T ss_pred ------------------------CCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH
Confidence 00011235789999999999988899999999999999999999999998765433
Q ss_pred H----HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh--hHHHHHcCCCCCCCChhhhhhc--cCCCCC
Q 001057 997 F----DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT--GAREVKQHPFFKNINWDTLARQ--KAMFIP 1065 (1170)
Q Consensus 997 ~----qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~--~AeEILqHPfF~~idwe~L~~~--~ppfiP 1065 (1170)
. ..+...... .+..++..+.+||.+||..||.+||+.. .+.++++||||...+|..+... .+|+.|
T Consensus 210 ~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (285)
T cd05605 210 REEVERRVKEDQEE---YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFKRLEAGMLEPPFCP 283 (285)
T ss_pred HHHHHHHhhhcccc---cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHHHHhhCCCCCCCCC
Confidence 3 223322222 3356899999999999999999999533 5899999999999999988765 456655
No 73
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-45 Score=395.96 Aligned_cols=267 Identities=33% Similarity=0.643 Sum_probs=224.8
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||+|+||+||+|.++.+++.||+|++.+.........+.+..|+.+|+.++||||++++++|.....+|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 79999999999999999999999999876544444556788899999999999999999999999999999999999999
Q ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCC
Q 001057 846 YSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSL 921 (1170)
Q Consensus 846 ~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl 921 (1170)
..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~------------ 148 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELK------------ 148 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecC------------
Confidence 988743 3469999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH----HHHH
Q 001057 922 GSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP----QQIF 997 (1170)
Q Consensus 922 ~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~----~ei~ 997 (1170)
..........||+.|+|||++.+..++.++|+|||||++|+|++|..||..... ....
T Consensus 149 ------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 210 (280)
T cd05608 149 ------------------DGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 210 (280)
T ss_pred ------------------CCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH
Confidence 000112245799999999999999999999999999999999999999986542 3334
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh--hHHHHHcCCCCCCCChhhhhhc--cCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT--GAREVKQHPFFKNINWDTLARQ--KAMFIP 1065 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~--~AeEILqHPfF~~idwe~L~~~--~ppfiP 1065 (1170)
..+......+ +..++..+.+||.+||+.||.+|++.. .++++++||||++++|..+... .+|+.|
T Consensus 211 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~~~~~~~~~~~~~~ 279 (280)
T cd05608 211 QRILNDSVTY---PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWRQLEAGMLPPPFVP 279 (280)
T ss_pred HhhcccCCCC---cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHhHHhhccCCCCCCC
Confidence 4444443333 357899999999999999999999642 4899999999999999988665 334443
No 74
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=421.01 Aligned_cols=261 Identities=39% Similarity=0.667 Sum_probs=238.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~Ly 834 (1170)
....|++.+.||+|.||+||+|+++.||+.||+|++.+.........+.+.+|+.||+++. |||||.++++|++...+|
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4457999999999999999999999999999999999887666566788999999999999 999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC----CcEEEEecCCcccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD----GHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d----G~VKLsDFGLAk~~~~ 910 (1170)
+|||+|.||+|++.|... .+++..+..++.|++.|+.|||+.||+||||||+|+|+... +.+|++|||+|....
T Consensus 113 lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~- 190 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK- 190 (382)
T ss_pred EEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc-
Confidence 999999999999999876 49999999999999999999999999999999999999643 579999999998631
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
........|||+.|+|||++...+|+..+||||+||++|.||+|.+||.+
T Consensus 191 ------------------------------~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~ 240 (382)
T KOG0032|consen 191 ------------------------------PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWG 240 (382)
T ss_pred ------------------------------CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcC
Confidence 13345678999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCCCC-ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 991 KTPQQIFDNIMNRDIPWPNIP-EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip-~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.+....+.+|..+.+.|+.-+ ..++..+++||.+||..||.+|++ |.++|+|||+++.
T Consensus 241 ~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~t---a~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 241 ETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLT---AAQALQHPWIKSI 299 (382)
T ss_pred CChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCC---HHHHhcCccccCC
Confidence 999999999999988766433 468999999999999999999999 8899999999875
No 75
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-47 Score=428.85 Aligned_cols=260 Identities=30% Similarity=0.493 Sum_probs=222.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc-c
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRE-N 832 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~-~ 832 (1170)
...++|.++++||.|+||.||+|+.+.+|+.||||.|++.-. . -..-.-++|+.-|++|+ |||||+|++++.+.+ +
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-c-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 456789999999999999999999999999999999887532 2 22233467999999999 999999999999988 9
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
+|+||||| ..+|+++++.. ..|++..++.|+.||++||+|+|++|++||||||||||+..+..|||+|||||+...
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~-- 161 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR-- 161 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc--
Confidence 99999999 56999999865 469999999999999999999999999999999999999988999999999999631
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
..+ ....++.|.||+|||+|+.. .|+.++|+|++|||++|+++-++.|.|
T Consensus 162 ----------------------Skp-------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG 212 (538)
T KOG0661|consen 162 ----------------------SKP-------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG 212 (538)
T ss_pred ----------------------cCC-------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC
Confidence 111 22357899999999999754 589999999999999999999999999
Q ss_pred CCHHHHHHHHhc-------------------cCCCCCCC--------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 991 KTPQQIFDNIMN-------------------RDIPWPNI--------PEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 991 ~~~~ei~qkIl~-------------------~~l~fP~i--------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.+..+++.+|.. -.+.||.+ -...+.++.+||.+||.+||.+||| |.++|
T Consensus 213 ~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpT---A~~al 289 (538)
T KOG0661|consen 213 ASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPT---ASQAL 289 (538)
T ss_pred CcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCcc---HHHHh
Confidence 998877777653 12233322 1348999999999999999999999 88999
Q ss_pred cCCCCCCC
Q 001057 1044 QHPFFKNI 1051 (1170)
Q Consensus 1044 qHPfF~~i 1051 (1170)
+||||+.-
T Consensus 290 ~~pffq~~ 297 (538)
T KOG0661|consen 290 QHPFFQVG 297 (538)
T ss_pred cCcccccc
Confidence 99999853
No 76
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.2e-44 Score=392.01 Aligned_cols=297 Identities=51% Similarity=0.909 Sum_probs=252.2
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||.||++.+..+++.||+|.+.+...........+.+|++++..++||||+++++.|...+.+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999988765444455678889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~-- 158 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN-- 158 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc--
Confidence 999999999999888889999999999999999999999999999999999999999999999999987421100000
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
...... .............|+..|+|||.+.+..++.++|+|||||++|||++|..||.+.+..+.+
T Consensus 159 ---------~~~~~~----~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~ 225 (305)
T cd05609 159 ---------LYEGHI----EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 225 (305)
T ss_pred ---------cccccc----ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 000000 0000011122356899999999999888999999999999999999999999999988888
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES 1069 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s 1069 (1170)
..+......+|.....++.++.+||.+||+.||.+||+..++.++++||||...+|..+......++|..++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (305)
T cd05609 226 GQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQKAEFIPQLES 297 (305)
T ss_pred HHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHHHhhcCCCCCCCCCC
Confidence 888877766665555789999999999999999999998889999999999999999988777777787766
No 77
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-47 Score=404.37 Aligned_cols=262 Identities=31% Similarity=0.536 Sum_probs=236.0
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
...+.|++...||+|.|+.|+.|.+..||+.+|+|++..... .....+.+.+|+.|-+.|+|||||+|++.+......|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~-~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhh-ccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence 344679999999999999999999999999999999876544 3346788999999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC---CcEEEEecCCccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD---GHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d---G~VKLsDFGLAk~~~~~ 911 (1170)
||+|+|.|++|..-|-....++|..+-.|++||+.||.|+|.+||||||+||+|+|+... .-+||+|||+|....
T Consensus 87 lvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~-- 164 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN-- 164 (355)
T ss_pred EEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC--
Confidence 999999999999877666679999999999999999999999999999999999999643 369999999998531
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.+.....++|||.|||||++...+|+..+|||+.|||||-||.|++||++.
T Consensus 165 -----------------------------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~ 215 (355)
T KOG0033|consen 165 -----------------------------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 215 (355)
T ss_pred -----------------------------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc
Confidence 123445689999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCC-CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 992 TPQQIFDNIMNRDIPWPN-IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~-ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+...+|+.|+.+.+.++. .-..+++++++||.+||..||.+|+| |.|.|+|||+.+-
T Consensus 216 ~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIt---a~EAL~HpWi~~r 273 (355)
T KOG0033|consen 216 DQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRIT---ADEALKHPWICNR 273 (355)
T ss_pred cHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhcc---HHHHhCCchhcch
Confidence 999999999999988775 34589999999999999999999999 8899999999864
No 78
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-46 Score=413.49 Aligned_cols=261 Identities=35% Similarity=0.604 Sum_probs=221.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc--ceE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE--NLY 834 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~--~Ly 834 (1170)
..+|...+.||+|+||+||++.+..+|..+|+|.+..... ...+.+.+|+.+|.+++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 4568899999999999999999999999999999876522 22677899999999999999999999755555 599
Q ss_pred EEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~~~~~~ 912 (1170)
|.|||++||+|.+++.+.+ .|++..++.|.+||+.||.|||++|||||||||+||||+. +|.+||+|||+++....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~-- 170 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES-- 170 (313)
T ss_pred eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc--
Confidence 9999999999999999887 7999999999999999999999999999999999999999 79999999999985310
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCC-
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNA- 990 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g- 990 (1170)
............||+.|||||++... ...+++|||||||++.||+||.+||..
T Consensus 171 -------------------------~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~ 225 (313)
T KOG0198|consen 171 -------------------------KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF 225 (313)
T ss_pred -------------------------ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh
Confidence 00111223467899999999999952 234599999999999999999999987
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
....+.+-.|.... ..|.+|..+|.++++||.+||..||.+||+ |.++|+|||.+..
T Consensus 226 ~~~~~~~~~ig~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpt---a~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 226 FEEAEALLLIGRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPT---AEELLEHPFLKQN 282 (313)
T ss_pred cchHHHHHHHhccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcC---HHHHhhChhhhcc
Confidence 44444444554444 445778899999999999999999999999 8999999999764
No 79
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=2.7e-44 Score=388.04 Aligned_cols=274 Identities=47% Similarity=0.894 Sum_probs=243.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||++.+..+++.||+|++.+.........+.+.+|+.+|+.++||||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998766555566788999999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||+|.|||++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~-------- 152 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK-------- 152 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccC--------
Confidence 999999999999988889999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
. .....+|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus 153 ----------------------~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 207 (290)
T cd05580 153 ----------------------G---RTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIY 207 (290)
T ss_pred ----------------------C---CCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0 022456899999999998888899999999999999999999999988888888
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAA 1067 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~ 1067 (1170)
+.+..+...+| ..++..++++|.+||+.||.+|++. ..++++++||||+.++|..+... .+++.|..
T Consensus 208 ~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (290)
T cd05580 208 EKILEGKVRFP---SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIALLQRKIEAPFIPKV 278 (290)
T ss_pred HHHhcCCccCC---ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHHhhccCCCCccCCC
Confidence 88877666554 5789999999999999999999952 35899999999999999988765 44555543
No 80
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.2e-44 Score=388.25 Aligned_cols=258 Identities=31% Similarity=0.494 Sum_probs=214.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||+|+||+||+|+++.+++.||+|++..... .....+.+.+|+.++..++||||++++++|...+.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999876532 2334567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++++.|..+......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~------- 152 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE------- 152 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccc-------
Confidence 9999877766555556799999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
..........||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+..
T Consensus 153 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~ 210 (287)
T cd07848 153 ----------------------GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQL 210 (287)
T ss_pred ----------------------cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0001112357899999999999988999999999999999999999999987655443
Q ss_pred HHHhcc-------------------CCCCCCC----------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 998 DNIMNR-------------------DIPWPNI----------PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 998 qkIl~~-------------------~l~fP~i----------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
..+... ...++.. ...++.++.+||.+||++||.+||+ ++++++||||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s---~~~~l~hp~f 287 (287)
T cd07848 211 FTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYL---TEQCLNHPAF 287 (287)
T ss_pred HHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCC---HHHHhcCCCC
Confidence 333211 0111110 1236888999999999999999999 8899999998
No 81
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2e-44 Score=387.91 Aligned_cols=267 Identities=30% Similarity=0.590 Sum_probs=223.0
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||+|+||.||+++++.+|+.||+|++.+...........+..|++++..++||||++++++|....++|+||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 79999999999999999999999998765443333445567799999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 846 YSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 846 ~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~-------------- 146 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELK-------------- 146 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecC--------------
Confidence 98886543 48899999999999999999999999999999999999999999999999987421
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH----HHHHHH
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP----QQIFDN 999 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~----~ei~qk 999 (1170)
.........||+.|+|||++.+..++.++|||||||++|+|++|..||.+... .++...
T Consensus 147 -----------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~ 209 (277)
T cd05607 147 -----------------DGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR 209 (277)
T ss_pred -----------------CCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH
Confidence 00011234689999999999998899999999999999999999999976432 344444
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh-hHHHHHcCCCCCCCChhhhhhc--cCCCCC
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT-GAREVKQHPFFKNINWDTLARQ--KAMFIP 1065 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~-~AeEILqHPfF~~idwe~L~~~--~ppfiP 1065 (1170)
+......++ ...++.++++||.+||+.||.+||++. ...+++.||||+.++|..+... .+||+|
T Consensus 210 ~~~~~~~~~--~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05607 210 TLEDEVKFE--HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPRLEAGLIPPPFVP 276 (277)
T ss_pred hhccccccc--cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCHHHHhcCcCCCCCCC
Confidence 444444332 246899999999999999999999953 2478999999999999998865 455554
No 82
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-44 Score=389.94 Aligned_cols=256 Identities=28% Similarity=0.511 Sum_probs=214.4
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+++|++++.||.|+||+||+|++..++..||+|++..... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 5689999999999999999999999999999999875432 22334677899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+.+ +|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~----- 155 (288)
T cd07871 82 FEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSV----- 155 (288)
T ss_pred EeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccC-----
Confidence 999974 9999987654 589999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..
T Consensus 156 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~ 210 (288)
T cd07871 156 -------------------------PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK 210 (288)
T ss_pred -------------------------CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0011123468999999999876 46899999999999999999999999988877
Q ss_pred HHHHHHhccC-------------------CCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 995 QIFDNIMNRD-------------------IPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 995 ei~qkIl~~~-------------------l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
+.+..+.... ..+|. ....++.++++||.+||++||.+|+| |+|+++|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t---~~~~l~hp~ 287 (288)
T cd07871 211 EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRIS---AEAALRHSY 287 (288)
T ss_pred HHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCC---HHHHhcCCC
Confidence 6665553210 00111 11246889999999999999999999 889999999
Q ss_pred C
Q 001057 1048 F 1048 (1170)
Q Consensus 1048 F 1048 (1170)
|
T Consensus 288 f 288 (288)
T cd07871 288 F 288 (288)
T ss_pred C
Confidence 8
No 83
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-45 Score=409.19 Aligned_cols=257 Identities=31% Similarity=0.589 Sum_probs=239.6
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
....+|++.+.||+|.||+|-+|.....|+.||||.++|..+.+....-++.+|++||+.|+||||+.+|.+|+..+.+.
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv 129 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV 129 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence 34468999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|||||..+|+|++|+.+.+.|++.+++.+++||+.|+.|||+++++|||||.+|||||.++++||+||||+..+
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly------ 203 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLY------ 203 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhh------
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCC-CcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGH-GATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.......++||+|.|.+||++.|..| ++.+|.|||||+||.|+.|..||.|.+.
T Consensus 204 -------------------------~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh 258 (668)
T KOG0611|consen 204 -------------------------ADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH 258 (668)
T ss_pred -------------------------ccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH
Confidence 12334568999999999999999988 6889999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
..+..+|.++.+.-| .-+..+.-||+.||-.||.+|.| +.+|-+|-|.+
T Consensus 259 k~lvrQIs~GaYrEP----~~PSdA~gLIRwmLmVNP~RRAT---ieDiAsHWWvN 307 (668)
T KOG0611|consen 259 KRLVRQISRGAYREP----ETPSDASGLIRWMLMVNPERRAT---IEDIASHWWVN 307 (668)
T ss_pred HHHHHHhhcccccCC----CCCchHHHHHHHHHhcCcccchh---HHHHhhhheee
Confidence 999999999998766 35668899999999999999988 88999998864
No 84
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.7e-44 Score=389.93 Aligned_cols=261 Identities=28% Similarity=0.514 Sum_probs=211.7
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.++|++++.||.|+||+||+|+++.+++.||||++..... ......+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999875432 12234567899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+. ++|.+++... +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+|+...
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~------ 154 (303)
T cd07869 82 FEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKS------ 154 (303)
T ss_pred EECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceecc------
Confidence 99995 6888887654 568999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCH-
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTP- 993 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~- 993 (1170)
.........+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+...
T Consensus 155 ------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 210 (303)
T cd07869 155 ------------------------VPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI 210 (303)
T ss_pred ------------------------CCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence 000111235689999999998764 578899999999999999999999987543
Q ss_pred HHHHHHHhc--cC---CCCCC------C------------------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 994 QQIFDNIMN--RD---IPWPN------I------------------PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 994 ~ei~qkIl~--~~---l~fP~------i------------------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+.+..+.. +. ..|+. . ....+..+.+||.+||+.||.+||| +.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s---~~~~l~ 287 (303)
T cd07869 211 QDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLS---AQAALS 287 (303)
T ss_pred HHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccC---HHHHhc
Confidence 233332211 00 00000 0 0124578999999999999999999 889999
Q ss_pred CCCCCCCCh
Q 001057 1045 HPFFKNINW 1053 (1170)
Q Consensus 1045 HPfF~~idw 1053 (1170)
||||+++.+
T Consensus 288 h~~f~~~~~ 296 (303)
T cd07869 288 HEYFSDLPP 296 (303)
T ss_pred CcccccCCh
Confidence 999998864
No 85
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-45 Score=422.72 Aligned_cols=256 Identities=34% Similarity=0.571 Sum_probs=229.8
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
..|+...+||+|+.|.||.|+...+++.||||.+...... ..+-+++|+.+|+..+|+|||++++.|.-.+.+++||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 4688899999999999999999999999999999876433 3467899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|||+||+|.+++... .++|.++..++++++.||+|||.+||||||||.+|||++.+|.+||+|||+|..+.
T Consensus 350 Eym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~-------- 420 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS-------- 420 (550)
T ss_pred eecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccc--------
Confidence 999999999988764 59999999999999999999999999999999999999999999999999997531
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.......+.+|||+|||||++....|++++||||||++++||+-|.+||...++-..+
T Consensus 421 ----------------------~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl 478 (550)
T KOG0578|consen 421 ----------------------EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 478 (550)
T ss_pred ----------------------cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH
Confidence 2233556889999999999999999999999999999999999999999988887777
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
..|.....+-...+..+|+++++||.+||+.|+.+|++ |.|+|+||||+-
T Consensus 479 yLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~Ras---A~eLL~HpFl~~ 528 (550)
T KOG0578|consen 479 YLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRAS---AKELLEHPFLKM 528 (550)
T ss_pred HHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCC---HHHHhcChhhhh
Confidence 77766544433456789999999999999999999999 899999999953
No 86
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=7.8e-44 Score=385.40 Aligned_cols=275 Identities=34% Similarity=0.627 Sum_probs=229.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.++..++|+||+.+++.+.+.+.+|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 47889999999999999999999999999999887654444455677889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~------- 153 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVP------- 153 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecC-------
Confidence 99999999988654 358999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH--
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ-- 994 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~-- 994 (1170)
.........||+.|+|||++.+..++.++|||||||++|+|++|.+||......
T Consensus 154 ------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~ 209 (285)
T cd05630 154 ------------------------EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK 209 (285)
T ss_pred ------------------------CCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch
Confidence 000112347999999999999988999999999999999999999999875432
Q ss_pred -HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh--hHHHHHcCCCCCCCChhhhhhc--cCCCCCC
Q 001057 995 -QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT--GAREVKQHPFFKNINWDTLARQ--KAMFIPA 1066 (1170)
Q Consensus 995 -ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~--~AeEILqHPfF~~idwe~L~~~--~ppfiP~ 1066 (1170)
.....+..... ...+..+++++.+||.+||+.||.+|++.. .+.++++||||+.++|..+... .|+++|.
T Consensus 210 ~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05630 210 REEVERLVKEVQ--EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFKRLEAGMLEPPFKPD 284 (285)
T ss_pred HHHHHhhhhhhh--hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHHHHhcCCCCCCCCCC
Confidence 22222221111 123357889999999999999999999843 4899999999999999987663 5667664
No 87
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.5e-44 Score=390.53 Aligned_cols=262 Identities=29% Similarity=0.460 Sum_probs=212.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----cce
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-----ENL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-----~~L 833 (1170)
+|++.+.||+|+||.||+|++..+|+.||||++.... ........+.+|+.+|+.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5999999999999999999999999999999987432 1223345688999999999999999999887543 358
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+ +++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~- 157 (338)
T cd07859 80 YVVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT- 157 (338)
T ss_pred EEEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc-
Confidence 9999999 57999999888889999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc--CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG--MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 158 --------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~ 211 (338)
T cd07859 158 --------------------------PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 211 (338)
T ss_pred --------------------------CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 00011234679999999999876 57899999999999999999999999877
Q ss_pred CHHHHHHHHhc--------------------------cC--CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 992 TPQQIFDNIMN--------------------------RD--IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 992 ~~~ei~qkIl~--------------------------~~--l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
+.......+.. .. ..+......+++.+.+||.+||+.||.+||+ +.+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~e~l 288 (338)
T cd07859 212 NVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT---AEEAL 288 (338)
T ss_pred ChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC---HHHHh
Confidence 65433322211 00 0111111246788999999999999999999 88999
Q ss_pred cCCCCCCCC
Q 001057 1044 QHPFFKNIN 1052 (1170)
Q Consensus 1044 qHPfF~~id 1052 (1170)
+||||+++.
T Consensus 289 ~hp~f~~~~ 297 (338)
T cd07859 289 ADPYFKGLA 297 (338)
T ss_pred cCchhhhcC
Confidence 999998764
No 88
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.9e-45 Score=413.75 Aligned_cols=263 Identities=32% Similarity=0.549 Sum_probs=225.1
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--c
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--E 831 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~ 831 (1170)
....+.|+.+.+||+|+||.||+|++..||+.||+|.+..... +........+|+.||++|+||||++|.+...+. .
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG 191 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence 4556789999999999999999999999999999999886542 344556778999999999999999999988776 6
Q ss_pred ceEEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
.+|||+|||+. ||.-++...+ .|++.+++.|++||+.||+|||++||+|||||.+|||||.+|.+||+|||||++...
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 79999999965 9999998754 699999999999999999999999999999999999999999999999999996421
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
. ......+.+-|.+|+|||+|+|. .|+.++|+||+||||.||+.|++.|.
T Consensus 271 ~-----------------------------~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~ 321 (560)
T KOG0600|consen 271 S-----------------------------GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ 321 (560)
T ss_pred C-----------------------------CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC
Confidence 0 01123456789999999999985 59999999999999999999999999
Q ss_pred CCCHHHHHHHHhcc--C---CCCC--CC-------------------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 990 AKTPQQIFDNIMNR--D---IPWP--NI-------------------PEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 990 g~~~~ei~qkIl~~--~---l~fP--~i-------------------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
|.+..+++..|.+- . -.|+ .+ ...++..+.+|+..||+.||.+|.| |.++|
T Consensus 322 G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~t---A~~aL 398 (560)
T KOG0600|consen 322 GRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGT---ASSAL 398 (560)
T ss_pred CccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccccc---HHHHh
Confidence 99999999988751 0 0011 11 1357899999999999999999999 77889
Q ss_pred cCCCCCC
Q 001057 1044 QHPFFKN 1050 (1170)
Q Consensus 1044 qHPfF~~ 1050 (1170)
+|+||..
T Consensus 399 ~seyF~t 405 (560)
T KOG0600|consen 399 QSEYFTT 405 (560)
T ss_pred cCccccc
Confidence 9999943
No 89
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.5e-43 Score=382.29 Aligned_cols=308 Identities=42% Similarity=0.786 Sum_probs=247.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||+||+|.+..+++.||||.+.+...........+..|+.+|..++||||+++++.+.+...+|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47999999999999999999999999999999998765554456678899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 838 EYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||+.|++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 999999999999764 569999999999999999999999999999999999999999999999999987532110000
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
.............. ...................||..|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 161 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~ 239 (316)
T cd05574 161 SKALRKGSRRSSVN-SIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE 239 (316)
T ss_pred cccccccccccccc-ccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence 00000000000000 00000000111223345689999999999999889999999999999999999999999988888
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC-hhhHHHHHcCCCCCCCChhhhhhccCCCCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG-ATGAREVKQHPFFKNINWDTLARQKAMFIPAA 1067 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS-a~~AeEILqHPfF~~idwe~L~~~~ppfiP~~ 1067 (1170)
.+..+......++.. ..++..+.+||.+||+.||.+||+ +..++++++||||++.+|..+....+|.+|..
T Consensus 240 ~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 311 (316)
T cd05574 240 TFSNILKKEVTFPGS-PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALIRHTTPPIIPRP 311 (316)
T ss_pred HHHHHhcCCccCCCc-cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhcccCCCCCCCCc
Confidence 888887766665532 237999999999999999999998 55689999999999999999888766666544
No 90
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.5e-43 Score=378.83 Aligned_cols=277 Identities=34% Similarity=0.604 Sum_probs=231.9
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|+..+.||.|+||+||+|.+..+++.||+|++.+...........+.+|+.+|..++|+||+.++++|...+.+|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 38889999999999999999999999999999877654444445667889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+.+++|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~------- 153 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIP------- 153 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecC-------
Confidence 99999999888654 369999999999999999999999999999999999999999999999999986420
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........|++.|+|||++.+..++.++|+|||||++|+|++|..||.+......
T Consensus 154 ------------------------~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~ 209 (285)
T cd05632 154 ------------------------EGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK 209 (285)
T ss_pred ------------------------CCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 00011234799999999999988899999999999999999999999988766544
Q ss_pred HHHHhccCCC-CCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCC
Q 001057 997 FDNIMNRDIP-WPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPA 1066 (1170)
Q Consensus 997 ~qkIl~~~l~-fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~ 1066 (1170)
...+...... ....+..++.++.+||.+||+.||.+||+. ..+.+++.|+||+.++|..+... .++|+|.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (285)
T cd05632 210 REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFKRLEAGMLDPPFVPD 284 (285)
T ss_pred HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHHHHhcCcCCCCCCCC
Confidence 3333221111 112335788999999999999999999984 24789999999999999987655 5566664
No 91
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.8e-44 Score=393.51 Aligned_cols=265 Identities=32% Similarity=0.515 Sum_probs=224.4
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC-- 829 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd-- 829 (1170)
..-.+++.|+.+..|++|+||.||.|+++.|++.||+|.++... .....--..++|+++|.+++|||||.+-.+...
T Consensus 70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 44567789999999999999999999999999999999987543 222233456899999999999999999877654
Q ss_pred ccceEEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccc
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVG 908 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~ 908 (1170)
-+.+|||||||+. ||..++.+.+ +|...+++.++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||||+..
T Consensus 149 ~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 149 MDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred cceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhh
Confidence 4579999999965 9999998875 8999999999999999999999999999999999999999999999999999964
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pP 987 (1170)
. .........+-|.+|+|||++++. .|+.++|+||+|||+.||+++.|.
T Consensus 228 g------------------------------sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPl 277 (419)
T KOG0663|consen 228 G------------------------------SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPL 277 (419)
T ss_pred c------------------------------CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCC
Confidence 2 111223456789999999999985 599999999999999999999999
Q ss_pred CCCCCHHHHHHHHhcc-------------------CCCCCCCC---------c-cCCHHHHHHHHHhccCCCCCCCChhh
Q 001057 988 FNAKTPQQIFDNIMNR-------------------DIPWPNIP---------E-EMSVEACDLIDKLLTENPVQRLGATG 1038 (1170)
Q Consensus 988 F~g~~~~ei~qkIl~~-------------------~l~fP~ip---------~-~lS~eakDLIkkLLq~DPskRpSa~~ 1038 (1170)
|.|....+++++|..- ...++..| . .++....+|+..+|.+||.+|+|
T Consensus 278 f~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t--- 354 (419)
T KOG0663|consen 278 FPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT--- 354 (419)
T ss_pred CCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc---
Confidence 9999998888888641 11122111 1 26689999999999999999999
Q ss_pred HHHHHcCCCCCCC
Q 001057 1039 AREVKQHPFFKNI 1051 (1170)
Q Consensus 1039 AeEILqHPfF~~i 1051 (1170)
|.|.|+|.||.+.
T Consensus 355 A~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 355 AEDGLKHEYFRET 367 (419)
T ss_pred HHHhhcccccccC
Confidence 7888999999975
No 92
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=399.07 Aligned_cols=261 Identities=32% Similarity=0.509 Sum_probs=222.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-----ccc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC-----REN 832 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd-----~~~ 832 (1170)
..|..++.||+|+||.|+.|.++.||+.||||.+... .......++..+|+.+|+.++|+||+.+++.+.. -..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 3566689999999999999999999999999987643 2344566788999999999999999999999876 245
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+|+|+| +.||...|+....+++++++++++||+.||+|+|+.||+||||||.|+|++.+..+||||||+|+.....
T Consensus 101 vYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~- 178 (359)
T KOG0660|consen 101 VYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF- 178 (359)
T ss_pred eEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-
Confidence 99999999 6799999999888999999999999999999999999999999999999999999999999999963100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
........++-|.+|+|||++.. ..|+.++||||+||||.|||+|++.|.|.
T Consensus 179 ---------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~ 231 (359)
T KOG0660|consen 179 ---------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK 231 (359)
T ss_pred ---------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC
Confidence 11123346788999999999875 56999999999999999999999999998
Q ss_pred CHHHHHHHHhcc----------------------------CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 992 TPQQIFDNIMNR----------------------------DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 992 ~~~ei~qkIl~~----------------------------~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
+...+++.|+.- ..+|..+-.+.++.+.||+.+||..||.+|+| |+|+|
T Consensus 232 d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRit---a~eAL 308 (359)
T KOG0660|consen 232 DYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRIT---AEEAL 308 (359)
T ss_pred chHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCC---HHHHh
Confidence 877776666531 11122222478999999999999999999999 88999
Q ss_pred cCCCCCCC
Q 001057 1044 QHPFFKNI 1051 (1170)
Q Consensus 1044 qHPfF~~i 1051 (1170)
.||||...
T Consensus 309 ~hPYl~~~ 316 (359)
T KOG0660|consen 309 AHPYLAPY 316 (359)
T ss_pred cChhhhhh
Confidence 99999875
No 93
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=398.50 Aligned_cols=268 Identities=31% Similarity=0.528 Sum_probs=233.4
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
....++|++..+||.|..++||+|+...++++||||++.-.... ...+.+.+|+..|+.++||||++++.+|..+..+
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~--~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN--NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh--hhHHHHHHHHHHhhhcCCCCcceEEEEEEeccee
Confidence 45668999999999999999999999999999999999876543 3378899999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
++||.||.+|++.++++.. ..|+|..+..++++++.||.|||++|.||||||+.||||+.+|.|||+|||.+-....
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~- 178 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD- 178 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecc-
Confidence 9999999999999999865 4599999999999999999999999999999999999999999999999998764210
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc--CCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG--MGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
+| .......++++|||+|||||++.. .+|+.++||||||++..||++|..||.
T Consensus 179 ------------~G-------------~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 179 ------------SG-------------DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred ------------cC-------------ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 00 011112278899999999999654 579999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCCCCC-------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 990 AKTPQQIFDNIMNRDIPWPNI-------PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~fP~i-------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
...+..++-..+++..+.+.. ...++..++.+|..||++||.+||+ |.++|+|+||+...
T Consensus 234 k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRpt---AskLlkh~FFk~~k 300 (516)
T KOG0582|consen 234 KYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPT---ASKLLKHAFFKKAK 300 (516)
T ss_pred cCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCC---HHHHhccHHHhhcc
Confidence 999999887777777664431 1346778999999999999999999 88999999998753
No 94
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=6.8e-43 Score=386.81 Aligned_cols=260 Identities=27% Similarity=0.470 Sum_probs=220.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++++.||+|+||.||+|++..+|..||+|++.... .......+.+|+.+|..++||||+++++++...+.+|+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (331)
T ss_pred CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4578999999999999999999999999999999987542 23455678999999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSL-NVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~-GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||++||+|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~----- 155 (331)
T cd06649 81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----- 155 (331)
T ss_pred EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccc-----
Confidence 999999999999999888899999999999999999999986 69999999999999999999999999987421
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..
T Consensus 156 ---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~ 208 (331)
T cd06649 156 ---------------------------DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK 208 (331)
T ss_pred ---------------------------ccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 00112457999999999999989999999999999999999999999876655
Q ss_pred HHHHHHhccC--------------------------------------------CCCCCC-CccCCHHHHHHHHHhccCC
Q 001057 995 QIFDNIMNRD--------------------------------------------IPWPNI-PEEMSVEACDLIDKLLTEN 1029 (1170)
Q Consensus 995 ei~qkIl~~~--------------------------------------------l~fP~i-p~~lS~eakDLIkkLLq~D 1029 (1170)
++...+.... ...+.. ...++.++++||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~ 288 (331)
T cd06649 209 ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN 288 (331)
T ss_pred HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC
Confidence 4433221100 000111 1246889999999999999
Q ss_pred CCCCCChhhHHHHHcCCCCCCCC
Q 001057 1030 PVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 1030 PskRpSa~~AeEILqHPfF~~id 1052 (1170)
|++||+ +.++++||||+...
T Consensus 289 P~~Rpt---~~ell~h~~~~~~~ 308 (331)
T cd06649 289 PAERAD---LKMLMNHTFIKRSE 308 (331)
T ss_pred cccCCC---HHHHhcChHHhhcc
Confidence 999999 88999999998653
No 95
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-45 Score=389.51 Aligned_cols=261 Identities=30% Similarity=0.528 Sum_probs=233.5
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeecccc-----ccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecc
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADM-----IRKNAVESILAERNILISVR-NPFVVRFFYSFTCR 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i-----~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~ 830 (1170)
.+.|..-+.||+|..++|..|.++.||..+|+|++..... .-....+....|+.||+++. ||+|+.+.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 4568888899999999999999999999999999864221 12334567788999999985 99999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
..+++|+|.|+.|.|+++|...-.+++...+.+++|++.|++|||.++||||||||+|||++++.++||+|||+|...
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l-- 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL-- 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc--
Confidence 999999999999999999999888999999999999999999999999999999999999999999999999999853
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc------CCCCcchhhhHHHHHHHHHHhC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG------MGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g------~~ys~ksDIWSLGVILYELLTG 984 (1170)
..+.+....||||+|+|||.+.. .+|+..+|+|++|||||.||.|
T Consensus 174 -----------------------------~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG 224 (411)
T KOG0599|consen 174 -----------------------------EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG 224 (411)
T ss_pred -----------------------------CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence 22345567899999999999964 4689999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCC-CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPNI-PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~i-p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.+||+.....-++..|+.+++.|..- -.++|..++|||.+||+.||.+|+| ++|+|.||||..+
T Consensus 225 cpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rit---ake~LaHpff~q~ 289 (411)
T KOG0599|consen 225 CPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRIT---AKEALAHPFFIQI 289 (411)
T ss_pred CCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhccc---HHHHhcChHHHHH
Confidence 99999999999999999999987642 2478999999999999999999999 8899999999765
No 96
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.6e-44 Score=382.41 Aligned_cols=259 Identities=32% Similarity=0.569 Sum_probs=222.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
.+|..++.||+|.||.||+|++..||+.||||.++..+. ....-...++|+..|+.++|+||+.|.++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~-kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA-KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc-ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 478899999999999999999999999999999987643 2233456789999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||++ .||..+|+.. ..|+...++.|+.+++.||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 81 Efm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p----- 154 (318)
T KOG0659|consen 81 EFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP----- 154 (318)
T ss_pred Eecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC-----
Confidence 9996 4999999876 46999999999999999999999999999999999999999999999999999974211
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
.......+-|.+|+|||.+.|. .|+..+|+||+|||+.||+.|.|-|.|.+.-+
T Consensus 155 -------------------------~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid 209 (318)
T KOG0659|consen 155 -------------------------NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID 209 (318)
T ss_pred -------------------------CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH
Confidence 1111122789999999999975 59999999999999999999999999999988
Q ss_pred HHHHHhcc-----CCCCCC--------------------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 996 IFDNIMNR-----DIPWPN--------------------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 996 i~qkIl~~-----~l~fP~--------------------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
++..|... .-.||+ +-...+.++.||+.+||.+||.+|++ |.|+|+|+||..
T Consensus 210 QL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit---a~qaL~~~yf~~ 286 (318)
T KOG0659|consen 210 QLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT---ASQALKHPYFKS 286 (318)
T ss_pred HHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc---HHHHhcchhhhc
Confidence 88887641 112222 11346788999999999999999999 889999999986
Q ss_pred C
Q 001057 1051 I 1051 (1170)
Q Consensus 1051 i 1051 (1170)
.
T Consensus 287 ~ 287 (318)
T KOG0659|consen 287 L 287 (318)
T ss_pred C
Confidence 4
No 97
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.5e-43 Score=374.83 Aligned_cols=255 Identities=33% Similarity=0.513 Sum_probs=208.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecC-CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeee-----
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRA-TGDLFAIKVLKKADMIRKNAVESILAERNILISV---RNPFVVRFFYSFT----- 828 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~-TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL---~HPNIVrL~~~Fq----- 828 (1170)
.+|++++.||+|+||+||+|++.. ++..||+|++...... ......+.+|+.++..+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 379999999999999999999854 5789999998754322 22234456677777665 6999999999875
Q ss_pred cccceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcc
Q 001057 829 CRENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSK 906 (1170)
Q Consensus 829 d~~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk 906 (1170)
....+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 2456899999995 6999998754 358999999999999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCC
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~p 986 (1170)
... .........||+.|+|||++.+..++.++|||||||++|||++|.+
T Consensus 159 ~~~-------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 207 (290)
T cd07862 159 IYS-------------------------------FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKP 207 (290)
T ss_pred ecc-------------------------------CCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCC
Confidence 421 0011234578999999999998899999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCC-----CCC-------------------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 987 PFNAKTPQQIFDNIMNRDI-----PWP-------------------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~~~l-----~fP-------------------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
||.+.+..+.+..|..... .++ .+...++..+++||.+||+.||.+||+ +.++
T Consensus 208 ~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s---~~~~ 284 (290)
T cd07862 208 LFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS---AYSA 284 (290)
T ss_pred CcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCC---HHHH
Confidence 9999888777776653210 011 011357888999999999999999999 8899
Q ss_pred HcCCCC
Q 001057 1043 KQHPFF 1048 (1170)
Q Consensus 1043 LqHPfF 1048 (1170)
|+||||
T Consensus 285 l~hp~f 290 (290)
T cd07862 285 LSHPYF 290 (290)
T ss_pred hcCCCC
Confidence 999998
No 98
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-44 Score=404.36 Aligned_cols=259 Identities=33% Similarity=0.581 Sum_probs=236.7
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..=|.+.+.||+|-|++|-+|++..||+.||||++.|..+. .-...+++.|+..|+.++|||||+||++......+|||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-TLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-hhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 34599999999999999999999999999999999998753 44567899999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEe-CCCCcEEEEecCCccccccccCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLI-GQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILL-d~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
+|+-.+|+|++||.++ ..+.|+.++.|++||+.||.|||+..+|||||||+||.+ .+-|-|||+|||++..+
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf------ 169 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF------ 169 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC------
Confidence 9999999999999876 469999999999999999999999999999999999876 56699999999998642
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCC-cchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHG-ATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys-~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
..+.+..+.||+..|-|||+++|..|+ +++||||||||||.|++|++||...+.
T Consensus 170 -------------------------~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND 224 (864)
T KOG4717|consen 170 -------------------------QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND 224 (864)
T ss_pred -------------------------CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc
Confidence 224456789999999999999999986 568999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW 1053 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw 1053 (1170)
.+.+.+|+..++..| ..++.+++|||..||..||.+|.+ +++|..|+|++.+|-
T Consensus 225 SETLTmImDCKYtvP---shvS~eCrdLI~sMLvRdPkkRAs---lEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 225 SETLTMIMDCKYTVP---SHVSKECRDLIQSMLVRDPKKRAS---LEEIVSTSWLQAGDR 278 (864)
T ss_pred hhhhhhhhcccccCc---hhhhHHHHHHHHHHHhcCchhhcc---HHHHhccccccCCCC
Confidence 999999999999766 789999999999999999999988 899999999998863
No 99
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.2e-43 Score=404.22 Aligned_cols=256 Identities=28% Similarity=0.456 Sum_probs=209.0
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc----
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR---- 830 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~---- 830 (1170)
....+|++++.||+|+||+||+|.+..+++.||||++.+.. ....+|+.+|+.++|||||+++++|...
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK 135 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence 34568999999999999999999999999999999876432 1234699999999999999998876432
Q ss_pred ----cceEEEEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-cEEEEe
Q 001057 831 ----ENLYLVMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-HIKLTD 901 (1170)
Q Consensus 831 ----~~LyLVMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-~VKLsD 901 (1170)
..+|+||||+++ +|..++.. ...+++..++.|+.||+.||.|||++||+||||||+||||+.++ .+||+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeec
Confidence 247899999964 78777643 45799999999999999999999999999999999999999765 699999
Q ss_pred cCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHH
Q 001057 902 FGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFE 980 (1170)
Q Consensus 902 FGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYE 980 (1170)
||+|+... ........+||+.|||||++.+. .|+.++|||||||+|||
T Consensus 215 FGla~~~~-------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 263 (440)
T PTZ00036 215 FGSAKNLL-------------------------------AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAE 263 (440)
T ss_pred cccchhcc-------------------------------CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence 99997421 00112245789999999998764 68999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHhcc-----------------CCCCCC---------CCccCCHHHHHHHHHhccCCCCCCC
Q 001057 981 LLIGIPPFNAKTPQQIFDNIMNR-----------------DIPWPN---------IPEEMSVEACDLIDKLLTENPVQRL 1034 (1170)
Q Consensus 981 LLTG~pPF~g~~~~ei~qkIl~~-----------------~l~fP~---------ip~~lS~eakDLIkkLLq~DPskRp 1034 (1170)
|++|.+||.+.+..+.+..+... .+.+|. ++...+.++.+||.+||++||.+|+
T Consensus 264 lltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ 343 (440)
T PTZ00036 264 MILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL 343 (440)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCc
Confidence 99999999998776665555321 111221 2345788999999999999999999
Q ss_pred ChhhHHHHHcCCCCCCCC
Q 001057 1035 GATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 1035 Sa~~AeEILqHPfF~~id 1052 (1170)
+ +.|+|+||||..+.
T Consensus 344 t---a~e~l~hp~f~~~~ 358 (440)
T PTZ00036 344 N---PIEALADPFFDDLR 358 (440)
T ss_pred C---HHHHhCChhHHhhh
Confidence 9 88999999998764
No 100
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.6e-42 Score=366.05 Aligned_cols=257 Identities=60% Similarity=1.069 Sum_probs=223.6
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHH-HhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNIL-ISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieIL-skL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+.||.|+||.||+|.+..+|+.||+|++.+...........+..|..++ ...+||||++++++|...+.+|+||||++|
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 5799999999999999999999999998775443333444455665554 455899999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
++|.+++...+.+++..+..++.||+.||.|||+.||+||||+|+|||++.++.++|+|||++....
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~------------- 148 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGL------------- 148 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecc-------------
Confidence 9999999988889999999999999999999999999999999999999999999999999986421
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
......|++.|+|||.+.+..++.++||||||+++|+|++|.+||...+...++..+..
T Consensus 149 ---------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 207 (260)
T cd05611 149 ---------------------ENKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS 207 (260)
T ss_pred ---------------------ccccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 01234688899999999988889999999999999999999999999888888888877
Q ss_pred cCCCCCC-CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChh
Q 001057 1003 RDIPWPN-IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWD 1054 (1170)
Q Consensus 1003 ~~l~fP~-ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe 1054 (1170)
....++. ....++.++.++|.+||+.||.+||++.+++|++.||||++++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~~ 260 (260)
T cd05611 208 RRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINWD 260 (260)
T ss_pred cccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCCC
Confidence 6655543 233689999999999999999999998889999999999999986
No 101
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.8e-42 Score=370.91 Aligned_cols=254 Identities=30% Similarity=0.498 Sum_probs=206.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeecc-----
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV---RNPFVVRFFYSFTCR----- 830 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL---~HPNIVrL~~~Fqd~----- 830 (1170)
+|++++.||+|+||+||+|+++.+++.||+|.+...... ......+.+|+.++..+ +||||++++++|...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 599999999999999999999999999999998754221 11223455677776655 799999999988652
Q ss_pred cceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVG 908 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~ 908 (1170)
..+++||||+. ++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 45899999996 5899988764 34899999999999999999999999999999999999999999999999998742
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
. .........||+.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 159 ~-------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f 207 (288)
T cd07863 159 S-------------------------------CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 207 (288)
T ss_pred c-------------------------------CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCc
Confidence 1 000112346899999999999989999999999999999999999999
Q ss_pred CCCCHHHHHHHHhccC-----CCCC-------------------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 989 NAKTPQQIFDNIMNRD-----IPWP-------------------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~-----l~fP-------------------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+......+..+.... ..|+ .....++..+.+||.+||+.||.+||+ +.+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~~~l~ 284 (288)
T cd07863 208 CGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRIS---AFRALQ 284 (288)
T ss_pred CCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCC---HHHHhc
Confidence 8887766655554210 0011 011356788999999999999999999 889999
Q ss_pred CCCC
Q 001057 1045 HPFF 1048 (1170)
Q Consensus 1045 HPfF 1048 (1170)
||||
T Consensus 285 hp~f 288 (288)
T cd07863 285 HPFF 288 (288)
T ss_pred CCCC
Confidence 9998
No 102
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.4e-42 Score=396.59 Aligned_cols=256 Identities=25% Similarity=0.350 Sum_probs=210.6
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.+...+|++++.||+|+||.||+|++..+++.||||.... ..+.+|+.+|+.++|||||+++++|......
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~ 158 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFT 158 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCee
Confidence 3556789999999999999999999999999999996432 3467899999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+|||++ +++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 159 ~lv~e~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~--- 234 (391)
T PHA03212 159 CLILPRY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVD--- 234 (391)
T ss_pred EEEEecC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccc---
Confidence 9999999 579999998878899999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC-
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT- 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~- 992 (1170)
.........+||+.|+|||++.+..|+.++|||||||++|||++|..||.+..
T Consensus 235 --------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~ 288 (391)
T PHA03212 235 --------------------------INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDG 288 (391)
T ss_pred --------------------------ccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccc
Confidence 00112234689999999999999899999999999999999999998875432
Q ss_pred ------HHHHHHHHhcc--------------------------CCCCCC-C-----CccCCHHHHHHHHHhccCCCCCCC
Q 001057 993 ------PQQIFDNIMNR--------------------------DIPWPN-I-----PEEMSVEACDLIDKLLTENPVQRL 1034 (1170)
Q Consensus 993 ------~~ei~qkIl~~--------------------------~l~fP~-i-----p~~lS~eakDLIkkLLq~DPskRp 1034 (1170)
....+..+... ....+. . ...++.++.+||.+||+.||.+||
T Consensus 289 ~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rp 368 (391)
T PHA03212 289 LDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRP 368 (391)
T ss_pred ccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCC
Confidence 11112211110 000000 0 013567899999999999999999
Q ss_pred ChhhHHHHHcCCCCCCC
Q 001057 1035 GATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1035 Sa~~AeEILqHPfF~~i 1051 (1170)
+ |.|+|+||||+.+
T Consensus 369 t---a~elL~hp~f~~~ 382 (391)
T PHA03212 369 S---AEALLDFAAFQDI 382 (391)
T ss_pred C---HHHHhcChhhccC
Confidence 9 8899999999875
No 103
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.8e-42 Score=376.16 Aligned_cols=260 Identities=27% Similarity=0.513 Sum_probs=214.9
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|.+++.||.|+||.||+|+++.+++.||+|.+..... ......+.+|+.++..++||||+++++++...+.+|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 35789999999999999999999999999999999875432 2223456789999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||+.+ +|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~---- 156 (309)
T cd07872 82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV---- 156 (309)
T ss_pred EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCC----
Confidence 9999964 888888765 4589999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+.
T Consensus 157 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~ 210 (309)
T cd07872 157 --------------------------PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTV 210 (309)
T ss_pred --------------------------CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 0001123467999999999875 4588999999999999999999999998876
Q ss_pred HHHHHHHhcc-------------------CCCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCC
Q 001057 994 QQIFDNIMNR-------------------DIPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHP 1046 (1170)
Q Consensus 994 ~ei~qkIl~~-------------------~l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHP 1046 (1170)
.+....+... ...++. ....++.++++||.+||+.||.+|++ +.|+++||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~e~l~h~ 287 (309)
T cd07872 211 EDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRIS---AEEAMKHA 287 (309)
T ss_pred HHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCC---HHHHhcCh
Confidence 6555444321 011111 11247889999999999999999999 88999999
Q ss_pred CCCCC
Q 001057 1047 FFKNI 1051 (1170)
Q Consensus 1047 fF~~i 1051 (1170)
||+.+
T Consensus 288 ~~~~~ 292 (309)
T cd07872 288 YFRSL 292 (309)
T ss_pred hhhhc
Confidence 99875
No 104
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.6e-42 Score=360.45 Aligned_cols=260 Identities=32% Similarity=0.523 Sum_probs=223.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI--RKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~--~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
++|++.+.||.|+||.||+|.+..+++.||+|.+...... .......+.+|+.++..++||||+++++++.+...+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4699999999999999999999999999999998754322 22345678899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||||++|++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||+++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~---- 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI---- 157 (263)
T ss_pred EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccc----
Confidence 9999999999999998888999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
...........|+..|+|||++.+..++.++|||||||++|+|++|..||...+...
T Consensus 158 -----------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~ 214 (263)
T cd06625 158 -----------------------CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMA 214 (263)
T ss_pred -----------------------ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHH
Confidence 000011124568899999999999889999999999999999999999998877666
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+...... +.++..++..+.+||.+||..+|.+||+ +.++++||||
T Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~ll~~~~~ 263 (263)
T cd06625 215 AIFKIATQPTN-PQLPSHVSPDARNFLRRTFVENAKKRPS---AEELLRHFFV 263 (263)
T ss_pred HHHHHhccCCC-CCCCccCCHHHHHHHHHHhhcCcccCCC---HHHHhhCCCC
Confidence 65555544332 2355678999999999999999999999 8899999998
No 105
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.7e-42 Score=368.40 Aligned_cols=266 Identities=35% Similarity=0.668 Sum_probs=222.7
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||.|+||+||+|.+..+|+.||+|++.+...........+..|+.+|+.++||||++++++|...+.+|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999999999999999999875544444556678899999999999999999999999999999999999999
Q ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 846 YSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 846 ~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
.+++.+.+ .+++..+..++.|++.||.|||++||+||||+|+|||++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~------------- 147 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG------------- 147 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-------------
Confidence 99997765 699999999999999999999999999999999999999999999999999864210
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH----HHHHHH
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP----QQIFDN 999 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~----~ei~qk 999 (1170)
........|+..|+|||++.+..++.++|||||||++|+|++|..||..... ..+...
T Consensus 148 ------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 209 (277)
T cd05577 148 ------------------GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR 209 (277)
T ss_pred ------------------CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc
Confidence 0011234578899999999888899999999999999999999999987543 333333
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh-h-hHHHHHcCCCCCCCChhhhhhc--cCCCCC
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA-T-GAREVKQHPFFKNINWDTLARQ--KAMFIP 1065 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa-~-~AeEILqHPfF~~idwe~L~~~--~ppfiP 1065 (1170)
+...... .+..+++.+.+||.+||+.||.+||+. . .+.+++.||||..++|+.+... .++|+|
T Consensus 210 ~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~~~~~~~~~~~~~ 276 (277)
T cd05577 210 TLEMAVE---YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRRLEAGMLEPPFIP 276 (277)
T ss_pred ccccccc---CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhhhhcCCCCCCCCC
Confidence 3332222 345689999999999999999999952 2 4889999999999999887544 445543
No 106
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.8e-42 Score=400.92 Aligned_cols=255 Identities=25% Similarity=0.438 Sum_probs=206.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC------CcEEEEEeeeec
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN------PFVVRFFYSFTC 829 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H------PNIVrL~~~Fqd 829 (1170)
..++|+++++||+|+||+||+|.+..+++.||||++++.. ........|+.++..++| ++|++++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 4578999999999999999999999999999999986532 222344567777766654 568999988876
Q ss_pred c-cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCC------------
Q 001057 830 R-ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDG------------ 895 (1170)
Q Consensus 830 ~-~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG------------ 895 (1170)
. .++|||||++ |++|.+++.+.+.+++..++.++.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~ 281 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALP 281 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccC
Confidence 5 5799999998 78999999888889999999999999999999998 5999999999999998765
Q ss_pred ----cEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhh
Q 001057 896 ----HIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADW 971 (1170)
Q Consensus 896 ----~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDI 971 (1170)
.+||+|||++... .......+||+.|||||++.+..|+.++||
T Consensus 282 ~~~~~vkl~DfG~~~~~---------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~Di 328 (467)
T PTZ00284 282 PDPCRVRICDLGGCCDE---------------------------------RHSRTAIVSTRHYRSPEVVLGLGWMYSTDM 328 (467)
T ss_pred CCCceEEECCCCccccC---------------------------------ccccccccCCccccCcHHhhcCCCCcHHHH
Confidence 4999999987531 011234689999999999999999999999
Q ss_pred hHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC------------------------CC-C--------------c
Q 001057 972 WSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWP------------------------NI-P--------------E 1012 (1170)
Q Consensus 972 WSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP------------------------~i-p--------------~ 1012 (1170)
|||||++|||++|++||.+.+..+.+..+......+| .. + .
T Consensus 329 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (467)
T PTZ00284 329 WSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREV 408 (467)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhh
Confidence 9999999999999999998776655444322110000 00 0 0
Q ss_pred cCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 1013 EMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1013 ~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..++.+.|||.+||++||.+||+ |.|+|+||||...
T Consensus 409 ~~~~~~~dli~~mL~~dP~~R~t---a~e~L~Hp~~~~~ 444 (467)
T PTZ00284 409 IRDDLLCDLIYGLLHYDRQKRLN---ARQMTTHPYVLKY 444 (467)
T ss_pred hchHHHHHHHHHhCCcChhhCCC---HHHHhcCcccccc
Confidence 12456789999999999999999 8899999999864
No 107
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.3e-42 Score=383.14 Aligned_cols=258 Identities=28% Similarity=0.477 Sum_probs=210.7
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc---
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE--- 831 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~--- 831 (1170)
...++|++++.||.|+||.||+|++..+|+.||+|++.+.. ........+.+|+.++..++||||++++++|....
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 34678999999999999999999999999999999987543 23344567889999999999999999999886543
Q ss_pred ---ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccc
Q 001057 832 ---NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVG 908 (1170)
Q Consensus 832 ---~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~ 908 (1170)
.+|+||||+.+ +|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++..
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 47999999965 67776643 5889999999999999999999999999999999999999999999999998742
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
. .........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 174 ~-------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf 222 (359)
T cd07876 174 C-------------------------------TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIF 222 (359)
T ss_pred c-------------------------------cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 1 001122357899999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhc----------------------cCCCCCC-----------------CCccCCHHHHHHHHHhccCC
Q 001057 989 NAKTPQQIFDNIMN----------------------RDIPWPN-----------------IPEEMSVEACDLIDKLLTEN 1029 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~----------------------~~l~fP~-----------------ip~~lS~eakDLIkkLLq~D 1029 (1170)
.+.+....+..+.. ....++. .....+.++++||.+||+.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 302 (359)
T cd07876 223 QGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVID 302 (359)
T ss_pred CCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccC
Confidence 88765443332221 1111110 11124678999999999999
Q ss_pred CCCCCChhhHHHHHcCCCCCC
Q 001057 1030 PVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 1030 PskRpSa~~AeEILqHPfF~~ 1050 (1170)
|.+||+ +.|+|+||||..
T Consensus 303 P~~R~t---~~e~l~hp~~~~ 320 (359)
T cd07876 303 PDKRIS---VDEALRHPYITV 320 (359)
T ss_pred cccCCC---HHHHhcCchhhh
Confidence 999999 889999999975
No 108
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.2e-41 Score=414.13 Aligned_cols=151 Identities=60% Similarity=1.005 Sum_probs=142.5
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+++|.++++||+|+||+||+|.+..+++.||||++.+...........+..|+.++..++||||+++++++....++|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 57899999999999999999999999999999999876666666678889999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
|||+.|++|..++...+.+++..++.|+.||+.||.|||++|||||||||+||||+.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999998888899999999999999999999999999999999999999999999999999974
No 109
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.5e-42 Score=386.88 Aligned_cols=261 Identities=29% Similarity=0.456 Sum_probs=217.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----ce
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE-----NL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~-----~L 833 (1170)
+|++++.||+|+||+||+|.+..+|+.||||.+.... ........+.+|+.+|..++||||+++++++.... .+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 5889999999999999999999999999999986532 22334567889999999999999999999998776 79
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+. ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~--- 155 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP--- 155 (372)
T ss_pred EEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeeccc---
Confidence 99999995 68999998878899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
..........||+.|+|||++.+. .++.++|||||||++|||++|++||.+.+
T Consensus 156 --------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 209 (372)
T cd07853 156 --------------------------DESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS 209 (372)
T ss_pred --------------------------CccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence 000111234689999999999874 47899999999999999999999999888
Q ss_pred HHHHHHHHhcc-----------------------CCCCC------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 PQQIFDNIMNR-----------------------DIPWP------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 ~~ei~qkIl~~-----------------------~l~fP------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
....+..|... ....+ .+....+.++.+||.+||+.||.+||+ +.+++
T Consensus 210 ~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t---~~e~l 286 (372)
T cd07853 210 PIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRIS---AADAL 286 (372)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcC---HHHHh
Confidence 76665554321 11111 122356889999999999999999999 88999
Q ss_pred cCCCCCCCCh
Q 001057 1044 QHPFFKNINW 1053 (1170)
Q Consensus 1044 qHPfF~~idw 1053 (1170)
+||||.+..+
T Consensus 287 ~hp~~~~~~~ 296 (372)
T cd07853 287 AHPYLDEGRL 296 (372)
T ss_pred cCHhhCCCcc
Confidence 9999998643
No 110
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.3e-42 Score=379.43 Aligned_cols=257 Identities=29% Similarity=0.518 Sum_probs=217.8
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++.+.||.|+||.||+|.+..++..||+|++.... .......+.+|+++|..++||||++++++|.+.+++|+
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 80 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence 4578999999999999999999999999999999887542 23445678899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSL-NVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~-GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||++||+|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.+|.+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~----- 155 (333)
T cd06650 81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI----- 155 (333)
T ss_pred EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh-----
Confidence 999999999999999888899999999999999999999975 79999999999999999999999999986421
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 156 ---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~ 208 (333)
T cd06650 156 ---------------------------DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK 208 (333)
T ss_pred ---------------------------hhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 00112357899999999999888999999999999999999999999866544
Q ss_pred HHHHHH--------------------------------------------hccCCCCCCCC-ccCCHHHHHHHHHhccCC
Q 001057 995 QIFDNI--------------------------------------------MNRDIPWPNIP-EEMSVEACDLIDKLLTEN 1029 (1170)
Q Consensus 995 ei~qkI--------------------------------------------l~~~l~fP~ip-~~lS~eakDLIkkLLq~D 1029 (1170)
.+...+ .+... +..+ ..++.++++||.+||++|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~ 286 (333)
T cd06650 209 ELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKN 286 (333)
T ss_pred HHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCC
Confidence 332211 11110 1111 236788999999999999
Q ss_pred CCCCCChhhHHHHHcCCCCCCC
Q 001057 1030 PVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1030 PskRpSa~~AeEILqHPfF~~i 1051 (1170)
|.+||+ +.|++.||||+..
T Consensus 287 P~~Rpt---~~ell~h~~~~~~ 305 (333)
T cd06650 287 PAERAD---LKQLMVHAFIKRS 305 (333)
T ss_pred cccCcC---HHHHhhCHHHhcC
Confidence 999999 8899999999864
No 111
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5.3e-42 Score=358.50 Aligned_cols=265 Identities=62% Similarity=1.116 Sum_probs=230.2
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||.|+||.||+|++..+|+.||+|++.+...........+.+|++++..++||||+++++.+.....+|+||||+.+++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999999999999999876554556677899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCC
Q 001057 846 YSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGG 925 (1170)
Q Consensus 846 ~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~ 925 (1170)
.+++.+.+.+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++..........
T Consensus 81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------- 150 (265)
T cd05579 81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQIN---------- 150 (265)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccc----------
Confidence 9999987889999999999999999999999999999999999999999999999999987532110000
Q ss_pred ccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC
Q 001057 926 FLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDI 1005 (1170)
Q Consensus 926 ~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l 1005 (1170)
............++..|+|||++.+..++.++|+||||+++|+|++|..||......+.+..+..+..
T Consensus 151 ------------~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (265)
T cd05579 151 ------------LNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI 218 (265)
T ss_pred ------------cccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc
Confidence 00111122345688999999999988899999999999999999999999999999888888887776
Q ss_pred CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh
Q 001057 1006 PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW 1053 (1170)
Q Consensus 1006 ~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw 1053 (1170)
.++.. ..++..+.+||.+||+.+|.+||++..+.++++||||++++|
T Consensus 219 ~~~~~-~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~~ 265 (265)
T cd05579 219 EWPED-VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGIDW 265 (265)
T ss_pred CCCcc-ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCCC
Confidence 66632 235899999999999999999999877899999999999998
No 112
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-41 Score=381.17 Aligned_cols=257 Identities=27% Similarity=0.450 Sum_probs=212.2
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR----- 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~----- 830 (1170)
..++|++++.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+.+++.++||||++++++|...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 4578999999999999999999999999999999987543 2234456778999999999999999999887654
Q ss_pred -cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 -~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..+|+||||+. ++|..++.. .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~ 177 (364)
T cd07875 101 FQDVYIVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177 (364)
T ss_pred cCeEEEEEeCCC-CCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence 35799999995 478877754 48899999999999999999999999999999999999999999999999997421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 178 -------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 178 -------------------------------TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred -------------------------------CCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 0011124578999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhccC----------------------CCC---------C--------CCCccCCHHHHHHHHHhccCCC
Q 001057 990 AKTPQQIFDNIMNRD----------------------IPW---------P--------NIPEEMSVEACDLIDKLLTENP 1030 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~----------------------l~f---------P--------~ip~~lS~eakDLIkkLLq~DP 1030 (1170)
+.+..+.+..+...- ..+ + ......+..+++||.+||+.||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP 306 (364)
T cd07875 227 GTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306 (364)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCc
Confidence 888766665554210 000 0 0011235678999999999999
Q ss_pred CCCCChhhHHHHHcCCCCCC
Q 001057 1031 VQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 1031 skRpSa~~AeEILqHPfF~~ 1050 (1170)
.+||+ +.++|+||||..
T Consensus 307 ~~R~t---~~e~L~hp~~~~ 323 (364)
T cd07875 307 SKRIS---VDEALQHPYINV 323 (364)
T ss_pred ccCCC---HHHHhcCccccc
Confidence 99999 889999999974
No 113
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-44 Score=403.79 Aligned_cols=257 Identities=31% Similarity=0.545 Sum_probs=230.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
..|+.+..||+|+||.||+|.+..+++.||||++.-.. ....++.+..|+.+|.+++++||.++|++|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 45888899999999999999999999999999987654 3456788999999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|||.||++.++++....+.+..+..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+...
T Consensus 91 ey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql--------- 161 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQL--------- 161 (467)
T ss_pred HHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeee---------
Confidence 99999999999998887899999999999999999999999999999999999999999999999998742
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
+....+..+++|||.||||||+.+.+|+.++||||||++.|||++|.|||....++..+
T Consensus 162 ---------------------~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl 220 (467)
T KOG0201|consen 162 ---------------------TNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL 220 (467)
T ss_pred ---------------------echhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE
Confidence 12233447899999999999999999999999999999999999999999998886555
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..|-+... |.+...+|+.+++||..||.+||+.||+ |.++|+|+|++..
T Consensus 221 flIpk~~P--P~L~~~~S~~~kEFV~~CL~k~P~~Rps---A~~LLKh~FIk~a 269 (467)
T KOG0201|consen 221 FLIPKSAP--PRLDGDFSPPFKEFVEACLDKNPEFRPS---AKELLKHKFIKRA 269 (467)
T ss_pred EeccCCCC--CccccccCHHHHHHHHHHhhcCcccCcC---HHHHhhhHHHHhc
Confidence 44544333 4455689999999999999999999999 8999999999864
No 114
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-43 Score=388.72 Aligned_cols=252 Identities=33% Similarity=0.563 Sum_probs=213.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----cc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-----EN 832 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-----~~ 832 (1170)
-.|+..+++|.|+||.||.|....+++.||||.+-...... .+|..||..++|||||+|..+|... -+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhH
Confidence 36999999999999999999999999999999875443222 3699999999999999999888643 25
Q ss_pred eEEEEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC-CcEEEEecCCccc
Q 001057 833 LYLVMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD-GHIKLTDFGLSKV 907 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d-G~VKLsDFGLAk~ 907 (1170)
+.+|||||+ .+|+.+++. +..++.-.++.|+.||+.||.|||+.||+||||||.|||+|.+ |.+||||||.|+.
T Consensus 97 lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 97 LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 778999996 499999984 4678999999999999999999999999999999999999976 8999999999996
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCC
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~p 986 (1170)
.. .+....++..|..|+|||.+.|. .|+.++||||.||++.||+-|++
T Consensus 176 L~-------------------------------~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 176 LV-------------------------------KGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred ec-------------------------------cCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 42 12233567889999999999975 69999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcc-----------------CCCCCC---------CCccCCHHHHHHHHHhccCCCCCCCChhhHH
Q 001057 987 PFNAKTPQQIFDNIMNR-----------------DIPWPN---------IPEEMSVEACDLIDKLLTENPVQRLGATGAR 1040 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~~-----------------~l~fP~---------ip~~lS~eakDLIkkLLq~DPskRpSa~~Ae 1040 (1170)
.|.|++..+++..|.+- ...+|. ....+++++.+|+.++|.++|.+|.+ +.
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~---~~ 301 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS---AL 301 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC---HH
Confidence 99999887777766530 112222 23467999999999999999999999 88
Q ss_pred HHHcCCCCCCC
Q 001057 1041 EVKQHPFFKNI 1051 (1170)
Q Consensus 1041 EILqHPfF~~i 1051 (1170)
|++.||||+.+
T Consensus 302 ~~l~h~fFdel 312 (364)
T KOG0658|consen 302 EALAHPFFDEL 312 (364)
T ss_pred HHhcchhhHHh
Confidence 99999999865
No 115
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.1e-41 Score=367.50 Aligned_cols=260 Identities=37% Similarity=0.671 Sum_probs=211.0
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHH---HhcCCCcEEEEEeeeecccceEEEEeecc
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNIL---ISVRNPFVVRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieIL---skL~HPNIVrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
.||+|+||.||++.+..+++.||+|++.+.............+|..++ ...+||||+.++++|...+.+|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765443333233344454443 34579999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCC
Q 001057 842 GGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSL 921 (1170)
Q Consensus 842 GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl 921 (1170)
||+|..++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~------------ 148 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS------------ 148 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecc------------
Confidence 99999999888889999999999999999999999999999999999999999999999999986320
Q ss_pred CCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-cCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH---HHHH
Q 001057 922 GSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-GMGHGATADWWSVGIILFELLIGIPPFNAKTP---QQIF 997 (1170)
Q Consensus 922 ~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~---~ei~ 997 (1170)
........||+.|+|||++. +..++.++||||+||++|+|++|..||..... ..+.
T Consensus 149 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 208 (279)
T cd05633 149 --------------------KKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 208 (279)
T ss_pred --------------------ccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHH
Confidence 00112346899999999986 45689999999999999999999999975432 2222
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChhhhhhc
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
........ .++..++.++.+||.+||..||.+|++ ...+.++++||||++++|......
T Consensus 209 ~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 269 (279)
T cd05633 209 RMTLTVNV---ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQQVYLQ 269 (279)
T ss_pred HHhhcCCc---CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHhHHhcC
Confidence 22222222 234678999999999999999999995 224889999999999999876544
No 116
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.7e-42 Score=384.13 Aligned_cols=257 Identities=29% Similarity=0.493 Sum_probs=211.3
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.....+|+.++.||.|+||.||+|++..+++.||||++.... .......+.+|+.+|..++|+||++++++|...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 345678999999999999999999999999999999986542 234456788999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+.+|+|... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 148 ~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~---- 219 (353)
T PLN00034 148 QVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA---- 219 (353)
T ss_pred EEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecc----
Confidence 999999999998653 345678888999999999999999999999999999999999999999999987521
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
.........+||+.|+|||++.. ..++.++|||||||++|||++|..||
T Consensus 220 --------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf 273 (353)
T PLN00034 220 --------------------------QTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPF 273 (353)
T ss_pred --------------------------cccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCC
Confidence 00011234579999999999843 23456899999999999999999999
Q ss_pred CCCCHH---HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 989 NAKTPQ---QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 989 ~g~~~~---ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...... .....+.... .+..+..++.++++||.+||+.||.+||+ +.|+++||||...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~P~~Rpt---~~ell~hp~~~~~ 334 (353)
T PLN00034 274 GVGRQGDWASLMCAICMSQ--PPEAPATASREFRHFISCCLQREPAKRWS---AMQLLQHPFILRA 334 (353)
T ss_pred CCCCCccHHHHHHHHhccC--CCCCCCccCHHHHHHHHHHccCChhhCcC---HHHHhcCcccccC
Confidence 743322 2222222221 22334678999999999999999999999 8899999999875
No 117
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.3e-41 Score=359.34 Aligned_cols=257 Identities=40% Similarity=0.798 Sum_probs=224.2
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||.|+||.||+|++..+++.||+|++.+.........+.+.+|+.++..++||||+++++.+.+...+|+||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 79999999999999999999999999876554455667899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCC
Q 001057 846 YSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGG 925 (1170)
Q Consensus 846 ~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~ 925 (1170)
.+++.+...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~---------------- 144 (262)
T cd05572 81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLK---------------- 144 (262)
T ss_pred HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccC----------------
Confidence 9999988789999999999999999999999999999999999999999999999999987421
Q ss_pred ccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhcc
Q 001057 926 FLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT--PQQIFDNIMNR 1003 (1170)
Q Consensus 926 ~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~--~~ei~qkIl~~ 1003 (1170)
. ........|++.|+|||++.+..++.++|+|||||++|+|++|..||.... ....+..+..+
T Consensus 145 --------------~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 209 (262)
T cd05572 145 --------------S-GQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKG 209 (262)
T ss_pred --------------c-ccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhcc
Confidence 0 001234568999999999988889999999999999999999999998777 66777777632
Q ss_pred CCCCCCCCccCCHHHHHHHHHhccCCCCCCCC--hhhHHHHHcCCCCCCCChh
Q 001057 1004 DIPWPNIPEEMSVEACDLIDKLLTENPVQRLG--ATGAREVKQHPFFKNINWD 1054 (1170)
Q Consensus 1004 ~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS--a~~AeEILqHPfF~~idwe 1054 (1170)
... +..+...+.++.+||.+||+.||.+|++ ...++|+++||||++.+|+
T Consensus 210 ~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~ 261 (262)
T cd05572 210 NGK-LEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDWE 261 (262)
T ss_pred CCC-CCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCCC
Confidence 221 2234566899999999999999999998 2458899999999999886
No 118
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-42 Score=388.16 Aligned_cols=256 Identities=30% Similarity=0.508 Sum_probs=218.0
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCE-EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-c
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDL-FAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE-N 832 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~-VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~-~ 832 (1170)
+...+..+...||.|+||+||.+.++ |.. ||+|++......... ...+.+|+.+|.+++|||||++++++.... .
T Consensus 38 i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 38 IDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred cChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 44455667777999999999999876 555 999999876544444 789999999999999999999999999887 7
Q ss_pred eEEEEeeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCCCcEEeCCCC-cEEEEecCCcccc
Q 001057 833 LYLVMEYLNGGDLYSLLRN--LGCLDEDMARVYIAELVLALEYLHSLN-VIHRDLKPDNLLIGQDG-HIKLTDFGLSKVG 908 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~--~~~LSEe~ar~IaaQIL~ALeYLHs~G-IIHRDIKPENILLd~dG-~VKLsDFGLAk~~ 908 (1170)
++|||||+++|+|..++.. ...++...+..++.||+.|++|||+++ ||||||||+||||+.++ ++||+|||+++..
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~ 194 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK 194 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence 9999999999999999987 578999999999999999999999999 99999999999999998 9999999999852
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh--cCCCCcchhhhHHHHHHHHHHhCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL--GMGHGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~--g~~ys~ksDIWSLGVILYELLTG~p 986 (1170)
.. .........||+.|||||++. +..|+.++||||||++||||+||..
T Consensus 195 ~~------------------------------~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~ 244 (362)
T KOG0192|consen 195 VI------------------------------SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEI 244 (362)
T ss_pred cc------------------------------ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCC
Confidence 10 001222368999999999999 5689999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 987 PFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
||.+....+....+..... .|.++..+++.+..|+.+|+..||.+||+...+...|.
T Consensus 245 Pf~~~~~~~~~~~v~~~~~-Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVVVGGL-RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred CCCCCCHHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 9999998666666654433 24456779999999999999999999999665544443
No 119
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.6e-42 Score=382.88 Aligned_cols=261 Identities=30% Similarity=0.557 Sum_probs=220.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeeccc----
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPF-VVRFFYSFTCRE---- 831 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPN-IVrL~~~Fqd~~---- 831 (1170)
...|..+++||+|+||+||+|+.+.+|+.||+|++.-.... +..-....+|+.+|+.++|+| ||+|++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 56688889999999999999999999999999998765321 234456789999999999999 999999998877
Q ss_pred --ceEEEEeeccCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 832 --NLYLVMEYLNGGDLYSLLRNLG----CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 832 --~LyLVMEY~~GGSL~dlLk~~~----~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
.+||||||+ .-+|..++.... .++...++.+++||+.||+|||+++|+||||||+||||+.+|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 459999998765 5888899999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG 984 (1170)
+...+ ........++|.+|+|||++.+. .|+..+||||+|||++||+++
T Consensus 168 ra~~i------------------------------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~ 217 (323)
T KOG0594|consen 168 RAFSI------------------------------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTR 217 (323)
T ss_pred HHhcC------------------------------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhC
Confidence 85310 11123345789999999999987 799999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhc-----cCCCCCC-------------CC---------ccCCHHHHHHHHHhccCCCCCCCChh
Q 001057 985 IPPFNAKTPQQIFDNIMN-----RDIPWPN-------------IP---------EEMSVEACDLIDKLLTENPVQRLGAT 1037 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~-----~~l~fP~-------------ip---------~~lS~eakDLIkkLLq~DPskRpSa~ 1037 (1170)
++.|.|.+..++...|.. ....||. .. ...++.+.+|+.+||+++|.+|.+
T Consensus 218 ~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S-- 295 (323)
T KOG0594|consen 218 RPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS-- 295 (323)
T ss_pred CCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcC--
Confidence 999999998887777754 1112221 11 233468999999999999999999
Q ss_pred hHHHHHcCCCCCCCC
Q 001057 1038 GAREVKQHPFFKNIN 1052 (1170)
Q Consensus 1038 ~AeEILqHPfF~~id 1052 (1170)
|+.+|.||||..+.
T Consensus 296 -a~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 296 -AKGALTHPYFSELP 309 (323)
T ss_pred -HHHHhcChhhcccc
Confidence 77889999999873
No 120
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.8e-41 Score=365.75 Aligned_cols=266 Identities=32% Similarity=0.575 Sum_probs=225.9
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.+.|++++.||.|+||.||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++.|.....+|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 36799999999999999999999999999999998754 344567788999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||++|++|..++.+ ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~------ 161 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV------ 161 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecc------
Confidence 999999999988765 3568999999999999999999999999999999999999999999999999886421
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
..........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||..
T Consensus 162 ------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 162 ------------------------KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred ------------------------ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 00011123568899999999853 3467889999999999999999999988
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhh
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLAR 1058 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~ 1058 (1170)
.+....+..+.....+....+..++.++.+||.+||..||.+||+ +.++++||||..+.|.....
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~~~~~~~~ 282 (292)
T cd06644 218 LNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPS---AAQLLEHPFVSSVTSNRPLR 282 (292)
T ss_pred ccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcC---HHHHhcCccccccccchhHH
Confidence 777766666654433322334578899999999999999999999 78999999999998876443
No 121
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.6e-42 Score=359.53 Aligned_cols=255 Identities=36% Similarity=0.649 Sum_probs=214.6
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|++++.||+|+||+||+|++..+++.||+|++........ ......+|+.++..++||||+++++++.+...+|+||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccccc
Confidence 8999999999999999999999999999999987654332 233445699999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCC
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAP 919 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~ 919 (1170)
+.+++|.+++...+.+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||.+....
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~---------- 149 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS---------- 149 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST----------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 9999999999977889999999999999999999999999999999999999999999999999987410
Q ss_pred CCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC---HHH
Q 001057 920 SLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-GMGHGATADWWSVGIILFELLIGIPPFNAKT---PQQ 995 (1170)
Q Consensus 920 sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYELLTG~pPF~g~~---~~e 995 (1170)
..........||+.|+|||++. +..++.++||||||+++|+|++|..||.... ...
T Consensus 150 --------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~ 209 (260)
T PF00069_consen 150 --------------------ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLE 209 (260)
T ss_dssp --------------------STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHH
T ss_pred --------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 1112334567899999999998 7789999999999999999999999999873 333
Q ss_pred HHHHHhccCCCCCC-CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPN-IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~-ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.+............ .....+.++.+||.+||+.||.+||+ +.++++||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~---~~~l~~~~~~ 260 (260)
T PF00069_consen 210 IIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPS---AEELLKHPWF 260 (260)
T ss_dssp HHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTT---HHHHHTSGGG
T ss_pred hhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcC---HHHHhcCCCC
Confidence 33333322211110 00123489999999999999999999 8899999998
No 122
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=6.6e-41 Score=351.68 Aligned_cols=254 Identities=27% Similarity=0.536 Sum_probs=219.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-cceEEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-ENLYLVM 837 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-~~LyLVM 837 (1170)
+|++++.||.|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++.+... ..+|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 49999999999999999999999999999999875432 234456788899999999999999999888654 4689999
Q ss_pred eeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 838 EYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~----- 154 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN----- 154 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecc-----
Confidence 999999999999763 4589999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
.........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~ 209 (257)
T cd08223 155 -------------------------QCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS 209 (257)
T ss_pred -------------------------cCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH
Confidence 0011224568999999999999889999999999999999999999999888777
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
+...+..+..+ ..+..++.++.+||.+||+.||.+||+ +.+++.||||
T Consensus 210 ~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~~l~~~~~ 257 (257)
T cd08223 210 LVYRIIEGKLP--PMPKDYSPELGELIATMLSKRPEKRPS---VKSILRQPYI 257 (257)
T ss_pred HHHHHHhcCCC--CCccccCHHHHHHHHHHhccCcccCCC---HHHHhcCCCC
Confidence 77777665542 345678999999999999999999999 8899999997
No 123
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.9e-41 Score=366.33 Aligned_cols=261 Identities=28% Similarity=0.521 Sum_probs=216.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
.+++|++++.||.|+||.||+|++..+++.||+|.+..... ......+.+|+.++..++||||+++++++.....+|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 45789999999999999999999999999999999875432 2233456789999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||+. ++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~---- 156 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSI---- 156 (301)
T ss_pred EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCC----
Confidence 999996 5899888764 4689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.........+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+.
T Consensus 157 --------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~ 210 (301)
T cd07873 157 --------------------------PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV 210 (301)
T ss_pred --------------------------CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 00011234578999999998764 478899999999999999999999998887
Q ss_pred HHHHHHHhcc-------------------CCCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCC
Q 001057 994 QQIFDNIMNR-------------------DIPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHP 1046 (1170)
Q Consensus 994 ~ei~qkIl~~-------------------~l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHP 1046 (1170)
.+....+... ...++. ....++.++++||.+||+.||.+||+ +.++++||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t---~~eil~h~ 287 (301)
T cd07873 211 EEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRIS---AEEAMKHP 287 (301)
T ss_pred HHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcC---HHHHhcCc
Confidence 6655444321 001111 11357889999999999999999999 88999999
Q ss_pred CCCCCC
Q 001057 1047 FFKNIN 1052 (1170)
Q Consensus 1047 fF~~id 1052 (1170)
||+.+.
T Consensus 288 ~f~~~~ 293 (301)
T cd07873 288 YFHCLG 293 (301)
T ss_pred cccccc
Confidence 998764
No 124
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.8e-41 Score=377.85 Aligned_cols=258 Identities=27% Similarity=0.465 Sum_probs=210.8
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR----- 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~----- 830 (1170)
..++|++++.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4578999999999999999999999999999999987543 2334456778899999999999999999988654
Q ss_pred -cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 -~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..+|+||||+.+ +|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~ 170 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence 357999999965 77777754 58899999999999999999999999999999999999999999999999987421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 171 -------------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 171 -------------------------------TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred -------------------------------CccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 0011224578999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHhcc----------------------C-----CCCC------------CCCccCCHHHHHHHHHhccCCC
Q 001057 990 AKTPQQIFDNIMNR----------------------D-----IPWP------------NIPEEMSVEACDLIDKLLTENP 1030 (1170)
Q Consensus 990 g~~~~ei~qkIl~~----------------------~-----l~fP------------~ip~~lS~eakDLIkkLLq~DP 1030 (1170)
+.+..+.+..+... . ..++ ..+...+.++++||.+||+.||
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP 299 (355)
T cd07874 220 GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299 (355)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCc
Confidence 87755443332210 0 0000 0112245788999999999999
Q ss_pred CCCCChhhHHHHHcCCCCCCC
Q 001057 1031 VQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1031 skRpSa~~AeEILqHPfF~~i 1051 (1170)
.+||+ +.|+|+||||+..
T Consensus 300 ~~Rps---~~ell~hp~~~~~ 317 (355)
T cd07874 300 AKRIS---VDEALQHPYINVW 317 (355)
T ss_pred hhcCC---HHHHhcCcchhcc
Confidence 99999 8899999999743
No 125
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2e-41 Score=373.92 Aligned_cols=257 Identities=23% Similarity=0.383 Sum_probs=206.2
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeee-----cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARK-----RATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFT 828 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArd-----k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fq 828 (1170)
+..++|++.+.||.|+||.||+|.+ ..+++.||+|++.... .......+.+|+.+|..+ +||||++++++|.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 3456899999999999999999975 3456789999987532 234456789999999999 8999999999887
Q ss_pred cc-cceEEEEeeccCCChHHHHHhc-------------------------------------------------------
Q 001057 829 CR-ENLYLVMEYLNGGDLYSLLRNL------------------------------------------------------- 852 (1170)
Q Consensus 829 d~-~~LyLVMEY~~GGSL~dlLk~~------------------------------------------------------- 852 (1170)
.. ..+|+||||+++|+|.+++...
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 64 4589999999999999999752
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCC
Q 001057 853 -------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGG 925 (1170)
Q Consensus 853 -------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~ 925 (1170)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~-------------- 227 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD-------------- 227 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccC--------------
Confidence 23778888999999999999999999999999999999999999999999999742100
Q ss_pred ccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHhcc
Q 001057 926 FLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQ-IFDNIMNR 1003 (1170)
Q Consensus 926 ~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~e-i~qkIl~~ 1003 (1170)
..........+++.|||||++.+..++.++|||||||+||||++ |.+||.+....+ +...+..+
T Consensus 228 --------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~ 293 (338)
T cd05102 228 --------------PDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG 293 (338)
T ss_pred --------------cchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcC
Confidence 00001123456789999999999899999999999999999997 999998865443 33444433
Q ss_pred CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 1004 DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 1004 ~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.. +..+..+++.+.+||.+||+.||.+||++.++.+.|
T Consensus 294 ~~--~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l 331 (338)
T cd05102 294 TR--MRAPENATPEIYRIMLACWQGDPKERPTFSALVEIL 331 (338)
T ss_pred CC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 32 223467899999999999999999999965554444
No 126
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=4e-41 Score=362.50 Aligned_cols=260 Identities=36% Similarity=0.655 Sum_probs=213.4
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHH---HHHhcCCCcEEEEEeeeecccceEEEEeecc
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERN---ILISVRNPFVVRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~Eie---ILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
.||.|+||.||+|++..+++.||+|++.+..............|.. ++....||||+.++++|...+.+|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999999999999999987654332222222334433 4445679999999999999999999999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCC
Q 001057 842 GGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSL 921 (1170)
Q Consensus 842 GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl 921 (1170)
||+|..++...+.+++..++.++.|++.||.|||+++|+||||||+|||++.++.++|+|||++....
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~------------ 148 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFS------------ 148 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccC------------
Confidence 99999999888889999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCC---CHHHHH
Q 001057 922 GSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAK---TPQQIF 997 (1170)
Q Consensus 922 ~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~---~~~ei~ 997 (1170)
.......+||..|+|||++.+. .++.++||||+||++|+|++|..||.+. ......
T Consensus 149 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~ 208 (278)
T cd05606 149 --------------------KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 208 (278)
T ss_pred --------------------ccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH
Confidence 0011234789999999999754 6889999999999999999999999876 333333
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh--hHHHHHcCCCCCCCChhhhhhc
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT--GAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~--~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
..+...... ++..++.++.++|.+||..+|.+|+... .+.++++||||+.++|..+...
T Consensus 209 ~~~~~~~~~---~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 269 (278)
T cd05606 209 RMTLTMAVE---LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQMVFLQ 269 (278)
T ss_pred HHhhccCCC---CCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCchHhhhc
Confidence 334333333 3356799999999999999999999322 3889999999999999987655
No 127
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=8.5e-42 Score=378.17 Aligned_cols=256 Identities=30% Similarity=0.470 Sum_probs=211.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR------ 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~------ 830 (1170)
.++|++++.||.|+||+||+|.+..+++.||+|++.+... .......+.+|+.+|+.++||||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 3679999999999999999999999999999999876432 223445677899999999999999999888643
Q ss_pred cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
..+|++|+++ +++|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~- 169 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD- 169 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC-
Confidence 3579999998 7899887764 569999999999999999999999999999999999999999999999999987421
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
......+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.
T Consensus 170 --------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 170 --------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred --------------------------------CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 01123578999999999987 568999999999999999999999998
Q ss_pred CCCHHHHHHHHhccCC--------------------CCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 990 AKTPQQIFDNIMNRDI--------------------PWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l--------------------~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
+.+..+.+..+..... .++. .....++.+.+||.+||+.||.+||+ +.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s---~~e 294 (343)
T cd07878 218 GNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRIS---ASE 294 (343)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCC---HHH
Confidence 8776555544432100 0011 11245677899999999999999999 889
Q ss_pred HHcCCCCCCC
Q 001057 1042 VKQHPFFKNI 1051 (1170)
Q Consensus 1042 ILqHPfF~~i 1051 (1170)
+++||||...
T Consensus 295 ll~hp~~~~~ 304 (343)
T cd07878 295 ALAHPYFSQY 304 (343)
T ss_pred HhcCcchhcc
Confidence 9999999865
No 128
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.4e-41 Score=349.99 Aligned_cols=254 Identities=30% Similarity=0.543 Sum_probs=222.9
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|.+.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++...+.+|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 58999999999999999999999999999999876543 24456778899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|++|++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++...
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~------- 152 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLS------- 152 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceecc-------
Confidence 99999999999764 568999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 153 -----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 209 (256)
T cd08529 153 -----------------------DNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL 209 (256)
T ss_pred -----------------------CccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 000111245688999999999998899999999999999999999999998888777
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+..+..+ .++..++..+.++|.+||+.+|.+||+ +.+++.|||+
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rp~---~~~ll~~~~~ 256 (256)
T cd08529 210 ILKIIRGVFP--PVSQMYSQQLAQLIDQCLTKDYRQRPD---TFQLLRNPSL 256 (256)
T ss_pred HHHHHcCCCC--CCccccCHHHHHHHHHHccCCcccCcC---HHHHhhCCCC
Confidence 7777765433 344578899999999999999999999 8899999995
No 129
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-41 Score=394.62 Aligned_cols=259 Identities=28% Similarity=0.422 Sum_probs=224.1
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCC-CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRAT-GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~T-Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
...|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|..++|||||+++++|...+++||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999998877 788999976543 23445677889999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 836 VMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+|+.....
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 9999999999988753 346899999999999999999999999999999999999999999999999999752100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 223 ----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~ 274 (478)
T PTZ00267 223 ----------------------------VSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP 274 (478)
T ss_pred ----------------------------cccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence 0011233568999999999999989999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+..+++..+..+... ..+..++.++.+||.+||..||.+||+ +.+++.|+|++.+
T Consensus 275 ~~~~~~~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rps---~~~~l~~~~~~~~ 329 (478)
T PTZ00267 275 SQREIMQQVLYGKYD--PFPCPVSSGMKALLDPLLSKNPALRPT---TQQLLHTEFLKYV 329 (478)
T ss_pred CHHHHHHHHHhCCCC--CCCccCCHHHHHHHHHHhccChhhCcC---HHHHHhCHHHHHH
Confidence 988888888776543 234678999999999999999999999 7889999998643
No 130
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.6e-41 Score=353.83 Aligned_cols=261 Identities=30% Similarity=0.542 Sum_probs=220.8
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc------cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI------RKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~------~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
+|.+...||.|+||.||+|.+..+++.||+|.+...... .....+.+.+|+.++..++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477888999999999999999989999999988654322 12344678899999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+||||+++++|..++...+.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 99999999999999999988889999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
. . ...........|+..|+|||++.+..++.++|+|||||++|+|++|..||.+.+
T Consensus 161 ~--------~----------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 216 (267)
T cd06628 161 L--------S----------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216 (267)
T ss_pred c--------c----------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence 0 0 000111224568999999999998889999999999999999999999998876
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+..+... ..+.++..++..+.+||.+||+.||.+||+ +.++++||||
T Consensus 217 ~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~ 267 (267)
T cd06628 217 QLQAIFKIGEN--ASPEIPSNISSEAIDFLEKTFEIDHNKRPT---AAELLKHPFL 267 (267)
T ss_pred HHHHHHHHhcc--CCCcCCcccCHHHHHHHHHHccCCchhCcC---HHHHhhCCCC
Confidence 65555554442 233455678999999999999999999999 8899999998
No 131
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.4e-41 Score=396.09 Aligned_cols=263 Identities=27% Similarity=0.462 Sum_probs=226.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc---
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE--- 831 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~--- 831 (1170)
...++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+|..++|+||++++..|...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345689999999999999999999999999999999876543 3445667889999999999999999988775432
Q ss_pred -----ceEEEEeeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEec
Q 001057 832 -----NLYLVMEYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDF 902 (1170)
Q Consensus 832 -----~LyLVMEY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDF 902 (1170)
.+++||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 378999999999999998643 46899999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELL 982 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 982 (1170)
|+++..... .........+||+.|+|||++.+..|+.++|||||||++|||+
T Consensus 188 Gls~~~~~~----------------------------~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl 239 (496)
T PTZ00283 188 GFSKMYAAT----------------------------VSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL 239 (496)
T ss_pred ccCeecccc----------------------------ccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999753100 0011223568999999999999989999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 983 IGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 983 TG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+|..||.+.+..+++..+..+... .++..+++++.+||.+||+.||.+||+ +.++++|||++..
T Consensus 240 tG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~RPs---~~ell~~p~~~~~ 303 (496)
T PTZ00283 240 TLKRPFDGENMEEVMHKTLAGRYD--PLPPSISPEMQEIVTALLSSDPKRRPS---SSKLLNMPICKLF 303 (496)
T ss_pred HCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcccChhhCcC---HHHHHhCHHHHHh
Confidence 999999999988888888766543 345788999999999999999999999 7899999998754
No 132
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-41 Score=358.92 Aligned_cols=256 Identities=32% Similarity=0.515 Sum_probs=215.9
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++.+.||.|+||.||+|++..+++.||+|+++... ......+.+|+.++..++||||+++++++...+.+|+
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l 83 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI 83 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence 3468999999999999999999999999999999987542 2334567889999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||||+++++|.+++...+.+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~----- 158 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITA----- 158 (267)
T ss_pred EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccC-----
Confidence 999999999999998888899999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.........||+.|+|||++. ...++.++|+|||||++|+|++|.+||....
T Consensus 159 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~ 213 (267)
T cd06645 159 -------------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred -------------------------cccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccccc
Confidence 001122457899999999985 4458889999999999999999999997766
Q ss_pred HHHHHHHHhccCCCCCCCC--ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 993 PQQIFDNIMNRDIPWPNIP--EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip--~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
.......+.......+... ..++..+.+||.+||+.||.+||+ +.++++|||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~---~~~ll~~~~ 267 (267)
T cd06645 214 PMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPT---AEKLLQHPF 267 (267)
T ss_pred chhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcC---HHHHhcCCC
Confidence 5444433333333322221 257789999999999999999999 889999998
No 133
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.7e-41 Score=354.57 Aligned_cols=262 Identities=26% Similarity=0.472 Sum_probs=221.3
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc---cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD---MIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~---i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
+|++.+.||.|+||.||+|.+ .+++.+|+|.+.... .........+.+|+++|+.++|+||+++++++.+...+|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 588899999999999999986 478999999886432 1223445678899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||||++|++|.+++.+.+.+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++.........
T Consensus 80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~- 158 (265)
T cd06631 80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH- 158 (265)
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc-
Confidence 9999999999999988888999999999999999999999999999999999999999999999999998742100000
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
...........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+...
T Consensus 159 -----------------------~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~ 215 (265)
T cd06631 159 -----------------------GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA 215 (265)
T ss_pred -----------------------ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH
Confidence 000111234568999999999998889999999999999999999999998877655
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+.......+.++..++.++.+||.+||..+|.+||+ +.++++||||
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~---~~~~l~~~~~ 265 (265)
T cd06631 216 AMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPS---ALQLLRHDFL 265 (265)
T ss_pred HHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCC---HHHHhcCCCC
Confidence 5555554434455566789999999999999999999998 8899999997
No 134
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.7e-41 Score=359.95 Aligned_cols=260 Identities=32% Similarity=0.559 Sum_probs=223.9
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.++|++++.||.|+||.||+|.+..++..||+|++... .....+.+..|+.+++.++||||+++++.+.....+|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 35799999999999999999999889999999998643 344567788999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+++++|..++... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~------ 154 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNK------ 154 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhc------
Confidence 9999999999998764 469999999999999999999999999999999999999999999999999876421
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
..........||+.|+|||++.. ..++.++|+|||||++|+|++|.+||.+
T Consensus 155 ------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~ 210 (280)
T cd06611 155 ------------------------STLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE 210 (280)
T ss_pred ------------------------ccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence 00011224568999999999863 3467789999999999999999999998
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.+....+..+.....+....+..++.++.+||.+||+.+|.+||+ +.++++||||....
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~~il~~~~~~~~~ 269 (280)
T cd06611 211 LNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT---AAELLKHPFVSDQS 269 (280)
T ss_pred CCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcC---HHHHhcChhhcccc
Confidence 887777777766544333334678999999999999999999999 88999999998764
No 135
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.1e-41 Score=381.16 Aligned_cols=264 Identities=23% Similarity=0.363 Sum_probs=215.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeec--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKR--ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk--~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
....+|.+++.||.|+||.||+|... .++..||+|.+.+.. ...+|+.+|+.++|||||+++++|.....
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKST 160 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCCE
Confidence 34457999999999999999999764 356889999876532 24579999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+||||+. ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+|......
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~- 238 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH- 238 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc-
Confidence 999999994 699999977788999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.........+||+.|+|||++.+..|+.++|||||||++|||++|..||.+..
T Consensus 239 ---------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~ 291 (392)
T PHA03207 239 ---------------------------PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ 291 (392)
T ss_pred ---------------------------cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 00111235679999999999999999999999999999999999999998754
Q ss_pred H---HHHHHHHhc----cCCCC-------------------------CCC--CccCCHHHHHHHHHhccCCCCCCCChhh
Q 001057 993 P---QQIFDNIMN----RDIPW-------------------------PNI--PEEMSVEACDLIDKLLTENPVQRLGATG 1038 (1170)
Q Consensus 993 ~---~ei~qkIl~----~~l~f-------------------------P~i--p~~lS~eakDLIkkLLq~DPskRpSa~~ 1038 (1170)
. ...+..+.. ....+ +.. ...++.++.+||.+||..||.+||+
T Consensus 292 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rps--- 368 (392)
T PHA03207 292 VKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPS--- 368 (392)
T ss_pred CCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCC---
Confidence 2 112222211 01111 100 1245778999999999999999999
Q ss_pred HHHHHcCCCCCCCChhhhhh
Q 001057 1039 AREVKQHPFFKNINWDTLAR 1058 (1170)
Q Consensus 1039 AeEILqHPfF~~idwe~L~~ 1058 (1170)
+.++|.||||....|+.+..
T Consensus 369 a~e~l~~p~f~~~~~~~~~~ 388 (392)
T PHA03207 369 AQDILSLPLFTKEPINLLNI 388 (392)
T ss_pred HHHHhhCchhhccchhhhcC
Confidence 88999999999998887654
No 136
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-42 Score=394.62 Aligned_cols=258 Identities=30% Similarity=0.547 Sum_probs=234.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc-eEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN-LYL 835 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~-LyL 835 (1170)
.++|.+++.+|+|+||.+++++++..++.|++|.+.-.....+ .......|..+++++.|||||.+++.|..+++ +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 5689999999999999999999999999999999987665443 34477899999999999999999999999998 999
Q ss_pred EEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||+||+||+|.+.|.+.+ .|+++.+..|+.|++.|++|||+++|+|||||+.||+++.++.|||.|||+|+...
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~---- 157 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN---- 157 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcC----
Confidence 999999999999997653 59999999999999999999999999999999999999999999999999999631
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.......+.+|||.||.||++.+.+|+.++|||||||++|||++-+++|.+.+.
T Consensus 158 --------------------------~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m 211 (426)
T KOG0589|consen 158 --------------------------PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM 211 (426)
T ss_pred --------------------------CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch
Confidence 112245678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
..+..+|..... ..+|...+.+++.||..||..+|..||+ |.++|.+|....
T Consensus 212 ~~Li~ki~~~~~--~Plp~~ys~el~~lv~~~l~~~P~~RPs---a~~LL~~P~l~~ 263 (426)
T KOG0589|consen 212 SELILKINRGLY--SPLPSMYSSELRSLVKSMLRKNPEHRPS---ALELLRRPHLLR 263 (426)
T ss_pred HHHHHHHhhccC--CCCCccccHHHHHHHHHHhhcCCccCCC---HHHHhhChhhhh
Confidence 999999998773 3466889999999999999999999999 889999998763
No 137
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.1e-41 Score=358.79 Aligned_cols=257 Identities=34% Similarity=0.546 Sum_probs=219.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
-|++++.||.|+||.||+|.+..++..+|+|.+.... ....+.+.+|+.++..++||||+++++.|.....+|+|||
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEE
Confidence 3788999999999999999999999999999986532 3456778899999999999999999999999999999999
Q ss_pred eccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|+++++|..++.+ ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~-------- 154 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT-------- 154 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccc--------
Confidence 9999999988765 4569999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-----cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-----GMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
..........||+.|+|||++. +..++.++|||||||++|+|++|.+||...+
T Consensus 155 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~ 212 (282)
T cd06643 155 ----------------------RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELN 212 (282)
T ss_pred ----------------------ccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccC
Confidence 0001122356899999999984 3457789999999999999999999999888
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..+....+.....+....+..++.++.+||.+||+.||.+||+ +.++++||||...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~ 268 (282)
T cd06643 213 PMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWT---TTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcC---HHHHhcCCCEecc
Confidence 7777666655443333344678899999999999999999999 7899999999854
No 138
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.8e-41 Score=355.07 Aligned_cols=255 Identities=41% Similarity=0.754 Sum_probs=222.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||+|++..+++.||+|++.+...........+.+|+.++++++||||+++++.|.....+|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 58999999999999999999999999999999987665555667889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+.|++|..++.....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~-------- 152 (258)
T cd05578 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP-------- 152 (258)
T ss_pred CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCC--------
Confidence 999999999998877899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC---HHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT---PQQ 995 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~---~~e 995 (1170)
........|+..|+|||++.+..++.++|+|||||++|+|++|..||...+ ...
T Consensus 153 -----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 209 (258)
T cd05578 153 -----------------------DTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQ 209 (258)
T ss_pred -----------------------CccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHH
Confidence 001123468889999999998889999999999999999999999998776 344
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
+...+.... +..+..++..+.++|.+||+.||.+|++.. ..|+++||||
T Consensus 210 ~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~-~~~l~~~~~~ 258 (258)
T cd05578 210 IRAKQETAD---VLYPATWSTEAIDAINKLLERDPQKRLGDN-LKDLKNHPYF 258 (258)
T ss_pred HHHHhcccc---ccCcccCcHHHHHHHHHHccCChhHcCCcc-HHHHhcCCCC
Confidence 433333222 234467899999999999999999999943 4999999998
No 139
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.8e-41 Score=397.43 Aligned_cols=253 Identities=30% Similarity=0.518 Sum_probs=216.8
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-C-----CcEEEEEeeeeccc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-N-----PFVVRFFYSFTCRE 831 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-H-----PNIVrL~~~Fqd~~ 831 (1170)
.+|.+++.||+|+||.|.+|.+..|++.||||++++. .....+...|+.||..|+ | -|||+++++|...+
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~ 261 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN 261 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence 3899999999999999999999999999999999864 345566778999999997 4 48999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC--cEEEEecCCccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG--HIKLTDFGLSKV 907 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG--~VKLsDFGLAk~ 907 (1170)
++|||+|.+ +.+|+++|+.+ ..|+...++.++.||+.||.+||++||||+|||||||||..-+ .|||+|||.|..
T Consensus 262 HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 262 HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999999999 67999999876 4699999999999999999999999999999999999997644 799999999875
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCC
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pP 987 (1170)
. ....++++.+..|+|||||+|..|+.+.||||||||++||++|.+.
T Consensus 341 ~---------------------------------~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL 387 (586)
T KOG0667|consen 341 E---------------------------------SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL 387 (586)
T ss_pred c---------------------------------CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence 2 1223477889999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhcc--------------------C-CCCCC----------------------------CC-------
Q 001057 988 FNAKTPQQIFDNIMNR--------------------D-IPWPN----------------------------IP------- 1011 (1170)
Q Consensus 988 F~g~~~~ei~qkIl~~--------------------~-l~fP~----------------------------ip------- 1011 (1170)
|.|.+..+++..|+.- . ..++. .|
T Consensus 388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~ 467 (586)
T KOG0667|consen 388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLE 467 (586)
T ss_pred cCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccc
Confidence 9999998888877531 0 00000 01
Q ss_pred ----ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 1012 ----EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1012 ----~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..-...+.|||++||.+||.+|++ +.++|+||||...
T Consensus 468 ~~~~~~~~~~F~dflk~~L~~dP~~R~t---p~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 468 SGLPKADDKLFIDFLKRCLEWDPAERIT---PAQALNHPFLTGT 508 (586)
T ss_pred hhcccccHHHHHHHHHHHhccCchhcCC---HHHHhcCcccccc
Confidence 012345789999999999999999 6788999999865
No 140
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-40 Score=355.70 Aligned_cols=255 Identities=30% Similarity=0.540 Sum_probs=208.7
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||.|+||.||+|++..++..||||++..... .......+.+|+.++..++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58999999999999999999999999999999865432 22334567889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 839 YLNGGDLYSLLRNL---GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~---~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.++|+|||++.....
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 153 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGI----- 153 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCC-----
Confidence 996 6898888653 4689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.........|++.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..
T Consensus 154 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~ 208 (285)
T cd07861 154 -------------------------PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI 208 (285)
T ss_pred -------------------------CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 00011233678999999998754 4788999999999999999999999887654
Q ss_pred HHHHHHhccC------------------CCCC--------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNRD------------------IPWP--------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~~------------------l~fP--------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.....+...- ..++ .....++.++++||.+||+.||.+||+ +.+++.||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt---~~~ll~~~~~ 285 (285)
T cd07861 209 DQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS---AKKALNHPYF 285 (285)
T ss_pred HHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC---HHHHhcCCCC
Confidence 3332221100 0000 012357899999999999999999999 8899999998
No 141
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.6e-40 Score=363.33 Aligned_cols=257 Identities=30% Similarity=0.523 Sum_probs=216.4
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||++.+..++..||+|.+.... .......+.+|++++..++||||++++++|.+.+.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 46999999999999999999999999999999886532 2344567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||++|++|.+++.+.+.+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++....
T Consensus 79 ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~------- 151 (308)
T cd06615 79 EHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI------- 151 (308)
T ss_pred eccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccc-------
Confidence 999999999999988889999999999999999999997 699999999999999999999999999986420
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.......+|++.|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 152 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~ 206 (308)
T cd06615 152 -------------------------DSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKEL 206 (308)
T ss_pred -------------------------ccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhH
Confidence 0011245789999999999888899999999999999999999999976654443
Q ss_pred HHHHhccCC----------------------------------CCCCCC-ccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 997 FDNIMNRDI----------------------------------PWPNIP-EEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 997 ~qkIl~~~l----------------------------------~fP~ip-~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
...+..... ..|..+ ..++.++++||.+||..||.+||+ +.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~ 283 (308)
T cd06615 207 EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERAD---LKE 283 (308)
T ss_pred HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcC---HHH
Confidence 322211100 001111 136788999999999999999999 889
Q ss_pred HHcCCCCCCC
Q 001057 1042 VKQHPFFKNI 1051 (1170)
Q Consensus 1042 ILqHPfF~~i 1051 (1170)
+++||||.+.
T Consensus 284 ll~~~~~~~~ 293 (308)
T cd06615 284 LTKHPFIKRA 293 (308)
T ss_pred HhcChhhhhc
Confidence 9999999763
No 142
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.4e-40 Score=357.66 Aligned_cols=269 Identities=45% Similarity=0.843 Sum_probs=226.2
Q ss_pred CeEEEEEeccCCCeEEEEeeec---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccce
Q 001057 759 DFEIIKPISQGAFGRVFLARKR---ATGDLFAIKVLKKADMI-RKNAVESILAERNILISV-RNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk---~TGe~VAIKvLkKs~i~-~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~L 833 (1170)
+|++.+.||.|+||.||++++. .+++.||||++++.... .......+.+|+.++..+ +||||+++++.|.....+
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 46789999998865432 233456788999999999 599999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+.+|+|..++.....+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE-- 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc--
Confidence 999999999999999988778999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC--CCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG--HGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~--ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........|++.|+|||++.+.. ++.++|+||||+++|+|++|..||...
T Consensus 159 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 211 (288)
T cd05583 159 ---------------------------EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVD 211 (288)
T ss_pred ---------------------------cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccC
Confidence 001122456899999999987654 788999999999999999999999643
Q ss_pred C----HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhc
Q 001057 992 T----PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 992 ~----~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
. ..++.+.+.....+ .+..++..+.+||.+||+.||.+||++.++.++|+||||+.++|+.+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~~~~~~ 280 (288)
T cd05583 212 GEQNSQSEISRRILKSKPP---FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWDDLAAK 280 (288)
T ss_pred cccchHHHHHHHHHccCCC---CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHHHHhhh
Confidence 2 23444444444333 34668899999999999999999999999999999999999999988665
No 143
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.4e-40 Score=347.95 Aligned_cols=260 Identities=32% Similarity=0.564 Sum_probs=220.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||+||+|....++..||+|++....... ....+.+|+.+|+.++|+||+++++.+.....+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 47999999999999999999998899999999987544322 5678899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 838 EYLNGGDLYSLLRNL---GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~---~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||++|++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~- 157 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD- 157 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc-
Confidence 999999999999764 4589999999999999999999999999999999999999999999999999875310000
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.........+|+..|+|||++... .++.++|+|||||++|+|++|..||...+.
T Consensus 158 -------------------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~ 212 (267)
T cd06610 158 -------------------------RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP 212 (267)
T ss_pred -------------------------ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh
Confidence 000122345789999999999876 789999999999999999999999998877
Q ss_pred HHHHHHHhccCCC-CCCCC--ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 994 QQIFDNIMNRDIP-WPNIP--EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 994 ~ei~qkIl~~~l~-fP~ip--~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+..+...... ++... ..++..+.+||.+||+.||.+||+ +.++++||||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~ll~~p~~ 267 (267)
T cd06610 213 MKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT---AEELLKHKFF 267 (267)
T ss_pred hhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcC---HHHHhhCCCC
Confidence 7666666544322 11111 367899999999999999999999 8899999998
No 144
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=8.2e-41 Score=364.72 Aligned_cols=250 Identities=27% Similarity=0.485 Sum_probs=193.3
Q ss_pred EEEeccCCCeEEEEeeec--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--ccceEEEEe
Q 001057 763 IKPISQGAFGRVFLARKR--ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC--RENLYLVME 838 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk--~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd--~~~LyLVME 838 (1170)
.++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|.. ...+|+|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 357999999999999976 4678999999875432 2346789999999999999999998854 456899999
Q ss_pred eccCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEe----CCCCcEEEEecCCc
Q 001057 839 YLNGGDLYSLLRNL---------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLI----GQDGHIKLTDFGLS 905 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~---------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILL----d~dG~VKLsDFGLA 905 (1170)
|+. ++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 994 5898887532 248999999999999999999999999999999999999 45678999999999
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG 984 (1170)
+...... .........+||+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus 160 ~~~~~~~---------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 212 (317)
T cd07868 160 RLFNSPL---------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 212 (317)
T ss_pred eccCCCC---------------------------ccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhC
Confidence 7521000 001112346789999999999874 589999999999999999999
Q ss_pred CCCCCCCCH---------HHHHHHHhccC-C----------CCCC------------------------CCccCCHHHHH
Q 001057 985 IPPFNAKTP---------QQIFDNIMNRD-I----------PWPN------------------------IPEEMSVEACD 1020 (1170)
Q Consensus 985 ~pPF~g~~~---------~ei~qkIl~~~-l----------~fP~------------------------ip~~lS~eakD 1020 (1170)
.+||.+... ...+..+.+.. . ..+. .....+.++.+
T Consensus 213 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 292 (317)
T cd07868 213 EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFH 292 (317)
T ss_pred CCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHH
Confidence 999975332 11222221100 0 0000 00123567899
Q ss_pred HHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 1021 LIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 1021 LIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
||.+||++||.+|+| |+|+|+||||
T Consensus 293 li~~mL~~dP~~R~t---~~e~l~hp~f 317 (317)
T cd07868 293 LLQKLLTMDPIKRIT---SEQAMQDPYF 317 (317)
T ss_pred HHHHHhccCcccCCC---HHHHhcCCCC
Confidence 999999999999999 8899999998
No 145
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.6e-40 Score=351.53 Aligned_cols=260 Identities=30% Similarity=0.505 Sum_probs=216.9
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cce
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADM--IRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENL 833 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i--~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~L 833 (1170)
.+|++.+.||+|+||.||+|.+..++..||+|++..... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 469999999999999999999999999999998865432 1234556788999999999999999999988753 568
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|++|||+++++|.+++...+.+++.....++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~- 160 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC- 160 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc-
Confidence 9999999999999999887889999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
..........|+..|+|||++.+..++.++|||||||++|+|++|.+||...+.
T Consensus 161 --------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~ 214 (266)
T cd06651 161 --------------------------MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA 214 (266)
T ss_pred --------------------------ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch
Confidence 000011234588999999999988899999999999999999999999987766
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
......+.... ..+.++..++..+++|| +||..+|.+||+ ++++++||||+
T Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~---~~eil~hp~~~ 265 (266)
T cd06651 215 MAAIFKIATQP-TNPQLPSHISEHARDFL-GCIFVEARHRPS---AEELLRHPFAQ 265 (266)
T ss_pred HHHHHHHhcCC-CCCCCchhcCHHHHHHH-HHhcCChhhCcC---HHHHhcCcccc
Confidence 55554443322 23445567889999999 567789999999 88999999996
No 146
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.6e-40 Score=356.83 Aligned_cols=253 Identities=28% Similarity=0.506 Sum_probs=212.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||.||+|++..+++.||+|++.+.. .......+.+|+.+|.+++||||+++++.|...+.+++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 46899999999999999999999999999999987542 2344567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+++++|..+ ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++....
T Consensus 79 e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~-------- 146 (279)
T cd06619 79 EFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV-------- 146 (279)
T ss_pred ecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecc--------
Confidence 99999998654 357889999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC-----
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT----- 992 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~----- 992 (1170)
.......+||+.|+|||++.+..++.++|+|||||++|+|++|..||....
T Consensus 147 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~ 202 (279)
T cd06619 147 ------------------------NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS 202 (279)
T ss_pred ------------------------cccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc
Confidence 001224578999999999999889999999999999999999999996532
Q ss_pred --HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 993 --PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 993 --~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.......+........ .....++++.+||.+||+.||.+||+ +.++++||||...+
T Consensus 203 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~---~~eil~~~~~~~~~ 260 (279)
T cd06619 203 LMPLQLLQCIVDEDPPVL-PVGQFSEKFVHFITQCMRKQPKERPA---PENLMDHPFIVQYN 260 (279)
T ss_pred cchHHHHHHHhccCCCCC-CCCcCCHHHHHHHHHHhhCChhhCCC---HHHHhcCccccccc
Confidence 1233333333221111 12357889999999999999999999 88999999998764
No 147
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.5e-40 Score=348.92 Aligned_cols=260 Identities=29% Similarity=0.493 Sum_probs=218.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc--cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cce
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD--MIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENL 833 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~--i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~L 833 (1170)
.+|++.+.||.|+||.||+|.+..+++.||||.+.... .......+.+.+|+.++..++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999999999999886432 12234567888999999999999999999988764 468
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||++|++|.+++.+.+.+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~-- 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI-- 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc--
Confidence 899999999999999988778999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
. ..........||..|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 160 ------~-------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 214 (265)
T cd06652 160 ------C-------------------LSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA 214 (265)
T ss_pred ------c-------------------ccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch
Confidence 0 000112234689999999999988899999999999999999999999988766
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
...+..+.... ..+..+..++..+.++|.+||. +|.+||+ +.++++|||+.
T Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~---~~~il~~~~~~ 265 (265)
T cd06652 215 MAAIFKIATQP-TNPVLPPHVSDHCRDFLKRIFV-EAKLRPS---ADELLRHTFVH 265 (265)
T ss_pred HHHHHHHhcCC-CCCCCchhhCHHHHHHHHHHhc-ChhhCCC---HHHHhcCcccC
Confidence 65555544322 2344556788999999999995 9999999 88999999984
No 148
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.8e-40 Score=347.44 Aligned_cols=253 Identities=33% Similarity=0.598 Sum_probs=218.2
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|++..++..||+|.+.... ..+.+.+|+.+++.++||||+++++.+.+...+|++|
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 67999999999999999999999889999999987542 2578899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+.+++|.+++.. ...+++..++.++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++....
T Consensus 78 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~------- 150 (256)
T cd06612 78 EYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLT------- 150 (256)
T ss_pred ecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcc-------
Confidence 99999999999975 3568999999999999999999999999999999999999999999999999987521
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|+..|+|||++.+..++.++|||||||++|+|++|.+||........
T Consensus 151 -----------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~ 207 (256)
T cd06612 151 -----------------------DTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA 207 (256)
T ss_pred -----------------------cCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh
Confidence 000012234588999999999998899999999999999999999999988776655
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+..........+..++.++.+||.+||+.||.+||+ +.+++.||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps---~~~il~~~~~ 256 (256)
T cd06612 208 IFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS---AIQLLQHPFI 256 (256)
T ss_pred hhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcC---HHHHhcCCCC
Confidence 544443332222233467889999999999999999999 8899999997
No 149
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-40 Score=353.57 Aligned_cols=256 Identities=30% Similarity=0.484 Sum_probs=214.6
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
...+|++++.||+|+||.||+|++..+++.||+|++.... ......+.+|+.++..++||||+++++++.....+|+
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~i 83 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWI 83 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEE
Confidence 3468999999999999999999999999999999986542 2234567889999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||||+++++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~----- 158 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITA----- 158 (267)
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecc-----
Confidence 999999999999998878899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.........|++.|+|||++. ...++.++|+|||||++|||++|..||....
T Consensus 159 -------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~ 213 (267)
T cd06646 159 -------------------------TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH 213 (267)
T ss_pred -------------------------cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence 000112356899999999985 3447789999999999999999999997665
Q ss_pred HHHHHHHHhccCCCCCCC--CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 993 PQQIFDNIMNRDIPWPNI--PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~i--p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
.......+.......+.. ...++..+.+||.+||+.||.+||+ +.++++|+|
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~---~~~il~~l~ 267 (267)
T cd06646 214 PMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPT---AERLLTHLF 267 (267)
T ss_pred hhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcC---HHHHhcCCC
Confidence 544433333333332221 2357899999999999999999999 889999987
No 150
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.6e-40 Score=352.49 Aligned_cols=257 Identities=30% Similarity=0.505 Sum_probs=212.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||.||+|+++.+|+.||+|++..... .....+.+.+|+.++..++||||++++++|.....+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999999875432 1223356788999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++++.|..++.....+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 152 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTG------- 152 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCC-------
Confidence 9999988888887777899999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........|+..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 153 -----------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~ 209 (286)
T cd07847 153 -----------------------PGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ 209 (286)
T ss_pred -----------------------CcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 0001123457889999999876 4578899999999999999999999988776544
Q ss_pred HHHHhcc-------------------CCCCCC---------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNR-------------------DIPWPN---------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~-------------------~l~fP~---------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+... ....|. ....++..+.+||.+||+.||.+||+ +.+++.||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~eil~~~~f 286 (286)
T cd07847 210 LYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLS---CEELLEHPYF 286 (286)
T ss_pred HHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCC---HHHHhcCCCC
Confidence 4333210 000110 01246888999999999999999999 8899999998
No 151
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.6e-40 Score=347.48 Aligned_cols=254 Identities=37% Similarity=0.570 Sum_probs=219.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+...+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP---GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc---hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 57999999999999999999999999999999987643 235578889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+++++|..++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 80 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~------- 152 (262)
T cd06613 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLT------- 152 (262)
T ss_pred eCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhh-------
Confidence 999999999999776 689999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC---CCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM---GHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~---~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
..........|+..|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+.
T Consensus 153 -----------------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~ 209 (262)
T cd06613 153 -----------------------ATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHP 209 (262)
T ss_pred -----------------------hhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCH
Confidence 001112245789999999999876 788999999999999999999999998776
Q ss_pred HHHHHHHhccCCCCCC--CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 994 QQIFDNIMNRDIPWPN--IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~--ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
......+....+..+. .+...+.++.+||.+||..+|..||+ +.+++.|+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~il~~~~ 262 (262)
T cd06613 210 MRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT---ATKLLQHPF 262 (262)
T ss_pred HHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCC---HHHHhcCCC
Confidence 6665555544333221 22356788999999999999999999 889999998
No 152
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.7e-40 Score=350.75 Aligned_cols=261 Identities=29% Similarity=0.512 Sum_probs=217.3
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc---cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI---RKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~---~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
+|+..+.||+|+||.||++.+..+++.||+|++...... .......+.+|+.+|+.++||||+++++++.+.+.+++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 488889999999999999999999999999998754321 12345788999999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-cEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-HIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||++|++|.+++.+.+.+++..+..++.||+.||.|||++||+||||||+||+++.++ .++|+|||++.......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~-- 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG-- 158 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc--
Confidence 999999999999998888899999999999999999999999999999999999998776 59999999987531000
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
...........||..|+|||++.+..++.++|+|||||++|+|++|..||......
T Consensus 159 ------------------------~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 214 (268)
T cd06630 159 ------------------------TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS 214 (268)
T ss_pred ------------------------ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc
Confidence 00011123456899999999999888999999999999999999999999765433
Q ss_pred HHHHHH---hccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 995 QIFDNI---MNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 995 ei~qkI---l~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
.....+ .... ..+..+..+++++.++|.+||..+|.+||+ +.++++||||+
T Consensus 215 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~ll~~~~~~ 268 (268)
T cd06630 215 NHLALIFKIASAT-TAPSIPEHLSPGLRDVTLRCLELQPEDRPP---SRELLKHPVFR 268 (268)
T ss_pred chHHHHHHHhccC-CCCCCchhhCHHHHHHHHHHcCCCcccCcC---HHHHhcCcccC
Confidence 222222 2211 223455678999999999999999999999 88999999995
No 153
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8.3e-41 Score=357.29 Aligned_cols=255 Identities=33% Similarity=0.556 Sum_probs=208.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||.|+||.||+|++..+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999999999999999875432 22234567789999999999999999999999999999999
Q ss_pred eccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|+. ++|..++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++....
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~------- 151 (284)
T cd07839 80 YCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGI------- 151 (284)
T ss_pred cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCC-------
Confidence 996 588888765 46799999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCC-CCCCHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPF-NAKTPQQ 995 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF-~g~~~~e 995 (1170)
.........+++.|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..+
T Consensus 152 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~ 208 (284)
T cd07839 152 -----------------------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 208 (284)
T ss_pred -----------------------CCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHH
Confidence 00011234578999999998774 4789999999999999999988875 4555554
Q ss_pred HHHHHhccC-----------------CCCC---------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRD-----------------IPWP---------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~-----------------l~fP---------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.+..+...- ..++ .....++.++++||.+||+.||.+||+ +.+++.||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t---~~~il~h~~f 284 (284)
T cd07839 209 QLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRIS---AEEALQHPYF 284 (284)
T ss_pred HHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCC---HHHHhcCCCC
Confidence 444432210 0011 111357899999999999999999999 8899999998
No 154
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-40 Score=352.55 Aligned_cols=253 Identities=30% Similarity=0.504 Sum_probs=211.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc------
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCR------ 830 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~------ 830 (1170)
+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.++..+ +||||++++++|...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 56899999999999999999999999999999987542 2235678899999988 699999999988753
Q ss_pred cceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVG 908 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~ 908 (1170)
..+|+||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 4689999999999999999864 46899999999999999999999999999999999999999999999999998742
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHh
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLI 983 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLT 983 (1170)
. ..........|++.|+|||++.+ ..++.++|||||||++|||++
T Consensus 162 ~------------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~ 211 (272)
T cd06637 162 D------------------------------RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 211 (272)
T ss_pred c------------------------------cccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence 1 00011234578999999999963 357889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 984 GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 984 G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
|..||...........+....... .....++.++.+||.+||..||.+||+ +.+++.||||
T Consensus 212 g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~il~~~~~ 272 (272)
T cd06637 212 GAPPLCDMHPMRALFLIPRNPAPR-LKSKKWSKKFQSFIESCLVKNHSQRPT---TEQLMKHPFI 272 (272)
T ss_pred CCCCccccCHHHHHHHHhcCCCCC-CCCCCcCHHHHHHHHHHcCCChhhCCC---HHHHhhCCCC
Confidence 999998776655554444322211 123467899999999999999999999 8899999998
No 155
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3.2e-40 Score=355.10 Aligned_cols=269 Identities=43% Similarity=0.823 Sum_probs=224.4
Q ss_pred CeEEEEEeccCCCeEEEEeeec---CCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccce
Q 001057 759 DFEIIKPISQGAFGRVFLARKR---ATGDLFAIKVLKKADMI-RKNAVESILAERNILISV-RNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk---~TGe~VAIKvLkKs~i~-~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~L 833 (1170)
+|++.+.||.|+||.||+|.+. .+|+.||+|++...... .....+++.+|+.+|..+ +|+||++++++|.....+
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999874 47899999998764332 223446778899999999 589999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+++++|.+++.....+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~--- 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE--- 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccc---
Confidence 99999999999999998888899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC--CCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM--GHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
..........|+..|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus 158 --------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 211 (290)
T cd05613 158 --------------------------DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVD 211 (290)
T ss_pred --------------------------ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcC
Confidence 000112245789999999998753 4678999999999999999999999743
Q ss_pred C----HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc
Q 001057 992 T----PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ 1059 (1170)
Q Consensus 992 ~----~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~ 1059 (1170)
. ...+...+.....++ +..++..+.+||.+||+.||.+|++. ..+.+++.||||+.++|+.+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 282 (290)
T cd05613 212 GEKNSQAEISRRILKSEPPY---PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKINWDDLAAK 282 (290)
T ss_pred CccccHHHHHHHhhccCCCC---CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCCHHHHhhc
Confidence 2 344445554444433 36789999999999999999999852 46899999999999999987544
No 156
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.6e-40 Score=358.67 Aligned_cols=258 Identities=34% Similarity=0.574 Sum_probs=219.6
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++++.||.|+||.||+|++..++..||+|.+..... ...+.+.+|+.++..++||||+++++.|....++|+|
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv 95 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEe
Confidence 4689999999999999999999999999999999876442 2346788999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||++|++|.+++.. ..+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 96 ~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~------- 167 (296)
T cd06654 96 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------- 167 (296)
T ss_pred ecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcc-------
Confidence 999999999999865 468999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|++.|+|||.+.+..++.++|||||||++|+|++|.+||...+....
T Consensus 168 -----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~ 224 (296)
T cd06654 168 -----------------------PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA 224 (296)
T ss_pred -----------------------ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh
Confidence 000111234689999999999988899999999999999999999999988776554
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...+..........+..++..+.+||.+||..||.+||+ +.++++||||...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt---~~eil~~~~~~~~ 276 (296)
T cd06654 225 LYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGS---AKELLQHQFLKIA 276 (296)
T ss_pred HHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcC---HHHHhhChhhhcc
Confidence 433333222222234578899999999999999999999 8899999999754
No 157
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.3e-40 Score=352.76 Aligned_cols=257 Identities=33% Similarity=0.590 Sum_probs=222.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|++..+++.||+|++.... .......+.+|+.+++.++||||++++++|.+...+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 46899999999999999999999999999999987543 2334567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+++++|.+++... .+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||+++....
T Consensus 79 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~------- 150 (274)
T cd06609 79 EYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS------- 150 (274)
T ss_pred EeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecc-------
Confidence 999999999999875 789999999999999999999999999999999999999999999999999875310
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.........|++.|+|||++.+..++.++|||||||++|+|++|.+||.+.+.....
T Consensus 151 -----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~ 207 (274)
T cd06609 151 -----------------------TMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL 207 (274)
T ss_pred -----------------------cccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH
Confidence 001123456889999999999888999999999999999999999999887777666
Q ss_pred HHHhccCCCCCCCCcc-CCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEE-MSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~-lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
..+.....+ ..+.. ++.++.++|.+||..||.+||+ +.++++||||....
T Consensus 208 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~p~~Rpt---~~~il~~~~~~~~~ 258 (274)
T cd06609 208 FLIPKNNPP--SLEGNKFSKPFKDFVSLCLNKDPKERPS---AKELLKHKFIKKAK 258 (274)
T ss_pred HHhhhcCCC--CCcccccCHHHHHHHHHHhhCChhhCcC---HHHHhhChhhcCCC
Confidence 666554332 22333 8899999999999999999999 88999999998753
No 158
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=5.9e-40 Score=345.00 Aligned_cols=254 Identities=28% Similarity=0.532 Sum_probs=222.4
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||.|+||.||++++..+|+.||+|.+..... .......+.+|+.+++.++||||++++++|...+++|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 59999999999999999999999999999999876433 23345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+.+++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~------- 152 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLN------- 152 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecC-------
Confidence 99999999999764 258899999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..++
T Consensus 153 -----------------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~ 209 (256)
T cd08218 153 -----------------------STVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL 209 (256)
T ss_pred -----------------------cchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH
Confidence 000111234588999999999988889999999999999999999999998888888
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+..+..+ ..+..++.++.++|.+||+.+|.+||+ +.++++||||
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~vl~~~~~ 256 (256)
T cd08218 210 VLKIIRGSYP--PVSSHYSYDLRNLVSQLFKRNPRDRPS---VNSILEKNFI 256 (256)
T ss_pred HHHHhcCCCC--CCcccCCHHHHHHHHHHhhCChhhCcC---HHHHhhCcCC
Confidence 8887766543 345678999999999999999999999 8899999998
No 159
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=5.5e-40 Score=354.23 Aligned_cols=266 Identities=23% Similarity=0.362 Sum_probs=218.7
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRA-----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~-----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
..++|++.+.||+|+||.||+|..+. .+..||+|.+.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 45689999999999999999997652 35589999876543 223345678899999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEE
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG----------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~----------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLs 900 (1170)
...|+||||+++|+|.+++...+ .++...+..++.||+.||.|||++||+||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 99999999999999999997532 24567788899999999999999999999999999999999999999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 980 (1170)
|||+++...... .........++..|+|||.+.+..++.++|+|||||++||
T Consensus 162 Dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~e 213 (288)
T cd05061 162 DFGMTRDIYETD----------------------------YYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWE 213 (288)
T ss_pred cCCccccccccc----------------------------cccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHH
Confidence 999987421000 0001112345678999999998889999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc---CCCCCCCCh
Q 001057 981 LLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ---HPFFKNINW 1053 (1170)
Q Consensus 981 LLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq---HPfF~~idw 1053 (1170)
|++ |.+||.+.+..+.+..+..+... ..+..++..+.++|.+||+.||.+||++.++.+.++ ||||++++|
T Consensus 214 l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~~ 288 (288)
T cd05061 214 ITSLAEQPYQGLSNEQVLKFVMDGGYL--DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 288 (288)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCCC
Confidence 998 89999998888887777654432 234577899999999999999999999665555443 999999998
No 160
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.6e-40 Score=359.22 Aligned_cols=244 Identities=17% Similarity=0.206 Sum_probs=209.9
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec----ccceEEEEee
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC----RENLYLVMEY 839 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd----~~~LyLVMEY 839 (1170)
..||.|++|.||+|.. +|+.||||++.+.........+.+.+|+.+|.+++|||||+++++|.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 5699999999999987 689999999987654445556788899999999999999999999876 3578999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
++||+|.+++...+.+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~--------- 174 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS--------- 174 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc---------
Confidence 9999999999988889999999999999999999998 499999999999999999999999999987421
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc--CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG--MGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.......||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..++
T Consensus 175 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~ 230 (283)
T PHA02988 175 ------------------------SPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI 230 (283)
T ss_pred ------------------------cccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 00113468899999999976 6789999999999999999999999999998888
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
+..+......++ .+..++.++++||.+||+.||.+||++.++.+.|
T Consensus 231 ~~~i~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 231 YDLIINKNNSLK-LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred HHHHHhcCCCCC-CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 888866544432 4457899999999999999999999955544433
No 161
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.5e-41 Score=374.74 Aligned_cols=253 Identities=27% Similarity=0.435 Sum_probs=203.2
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
....+|++++.||.|+||.||+|++..+++.||+|+..+. ....|+.+|..++||||++++++|......|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeE
Confidence 3445799999999999999999999999999999985443 2346899999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 835 LVMEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
+||||+. ++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~---- 208 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPV---- 208 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccc----
Confidence 9999994 688888865 3569999999999999999999999999999999999999999999999999987411
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCC-CCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPP-FNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pP-F~g~~ 992 (1170)
.........||+.|+|||++.+..++.++|||||||++|||+++..| |....
T Consensus 209 ---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~ 261 (357)
T PHA03209 209 ---------------------------VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPP 261 (357)
T ss_pred ---------------------------cCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCC
Confidence 00112245799999999999999999999999999999999985444 44321
Q ss_pred H----------HHHHHHHhcc---CCCCC-----------------------C---C-CccCCHHHHHHHHHhccCCCCC
Q 001057 993 P----------QQIFDNIMNR---DIPWP-----------------------N---I-PEEMSVEACDLIDKLLTENPVQ 1032 (1170)
Q Consensus 993 ~----------~ei~qkIl~~---~l~fP-----------------------~---i-p~~lS~eakDLIkkLLq~DPsk 1032 (1170)
. ..+...+... ...++ . + ...++.++.+||.+||+.||.+
T Consensus 262 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 341 (357)
T PHA03209 262 STPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAM 341 (357)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCccc
Confidence 1 1111111100 00111 0 0 0245778889999999999999
Q ss_pred CCChhhHHHHHcCCCCCCC
Q 001057 1033 RLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1033 RpSa~~AeEILqHPfF~~i 1051 (1170)
||+ |.|+|+||||+++
T Consensus 342 Rpt---a~e~l~hp~f~~~ 357 (357)
T PHA03209 342 RPS---AEEILNYPMFAQL 357 (357)
T ss_pred CcC---HHHHhcCchhccC
Confidence 999 8899999999864
No 162
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.1e-40 Score=365.36 Aligned_cols=264 Identities=23% Similarity=0.381 Sum_probs=210.7
Q ss_pred EEEEeccC--CCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 762 IIKPISQG--AFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 762 vlk~LG~G--gFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
++.+||+| +||+||+++++.+|+.||+|.+..... .......+.+|+.+++.++||||++++++|..++.+|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 56789999 789999999999999999999875432 334556788899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 840 LNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 840 ~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
+++|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++++|||.+........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~---- 156 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ---- 156 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccc----
Confidence 9999999999753 4589999999999999999999999999999999999999999999999987643210000
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc--CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG--MGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
.. ...........++..|+|||++.+ ..|+.++|||||||++|||++|..||.......
T Consensus 157 -------------~~------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 217 (327)
T cd08227 157 -------------RL------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 217 (327)
T ss_pred -------------cc------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH
Confidence 00 000001122457888999999976 458999999999999999999999998766544
Q ss_pred HHHHHhccCCCC-------------------------------------------CCCCccCCHHHHHHHHHhccCCCCC
Q 001057 996 IFDNIMNRDIPW-------------------------------------------PNIPEEMSVEACDLIDKLLTENPVQ 1032 (1170)
Q Consensus 996 i~qkIl~~~l~f-------------------------------------------P~ip~~lS~eakDLIkkLLq~DPsk 1032 (1170)
.......+..+. ......+++++.+||.+||+.||.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 297 (327)
T cd08227 218 MLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDA 297 (327)
T ss_pred HHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchh
Confidence 443333222110 0011235778999999999999999
Q ss_pred CCChhhHHHHHcCCCCCCCC
Q 001057 1033 RLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 1033 RpSa~~AeEILqHPfF~~id 1052 (1170)
||+ +.++++||||+.+.
T Consensus 298 Rpt---~~ell~~p~f~~~~ 314 (327)
T cd08227 298 RPS---ASTLLNHSFFKQIK 314 (327)
T ss_pred cCC---HHHHhcChhhhhcc
Confidence 999 88999999998764
No 163
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=8.4e-40 Score=343.85 Aligned_cols=254 Identities=30% Similarity=0.530 Sum_probs=223.4
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||.|+||.||++++..+++.+++|.+..... .......+.+|+.++++++|+||++++++|.+.+.+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 59999999999999999999999999999999875442 23455678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+++|+|.+++... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~------ 153 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS------ 153 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccc------
Confidence 99999999999765 4689999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+.
T Consensus 154 ------------------------~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~ 209 (256)
T cd08221 154 ------------------------EYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL 209 (256)
T ss_pred ------------------------ccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 00012345689999999999988889999999999999999999999999888888
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+..+... ..+..++.++.++|.+||+.+|.+||+ +.++++|||+
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~s---~~~ll~~~~l 256 (256)
T cd08221 210 VVKIVQGNYT--PVVSVYSSELISLVHSLLQQDPEKRPT---ADEVLDQPLL 256 (256)
T ss_pred HHHHHcCCCC--CCccccCHHHHHHHHHHcccCcccCCC---HHHHhhCcCC
Confidence 8888766543 234678999999999999999999999 8899999996
No 164
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.2e-40 Score=350.55 Aligned_cols=278 Identities=39% Similarity=0.734 Sum_probs=230.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLV 836 (1170)
++|.+.+.||.|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||||++++++|.+.+.+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998765555555678889999999999 99999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||+.+++|.+++.+.+.+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~- 159 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE- 159 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc-
Confidence 9999999999999988889999999999999999999999999999999999999999999999999987532111000
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
... .... .................|+..|+|||++.+..++.++|+|||||++|+|++|..||...+....
T Consensus 160 --~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 230 (280)
T cd05581 160 --SNK--GDAT-----NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT 230 (280)
T ss_pred --cCC--CCCc-----cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 000 0000 0000001112233456789999999999988899999999999999999999999998887777
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh-hHHHHHcCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT-GAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~-~AeEILqHPfF 1048 (1170)
++.+......+| ..++..+.+||.+||+.||.+||++. +..++++||||
T Consensus 231 ~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 231 FQKILKLEYSFP---PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHhcCCCCC---CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 777776555544 57899999999999999999999920 11899999998
No 165
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.9e-40 Score=342.54 Aligned_cols=254 Identities=32% Similarity=0.596 Sum_probs=220.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--ccceEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC--RENLYLV 836 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd--~~~LyLV 836 (1170)
+|++++.||.|+||.||+|.+..++..||+|++..... .....+.+..|+.+++.++||||+++++.+.. ...+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58999999999999999999999999999999876543 34455778899999999999999999987754 4568999
Q ss_pred EeeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH-----hCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 837 MEYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLH-----SLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLH-----s~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
|||+++++|.+++... ..+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999999753 57899999999999999999999 89999999999999999999999999999875
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCC
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pP 987 (1170)
.. ..........|++.|+|||++.+..++.++|+||||+++|+|++|..|
T Consensus 160 ~~------------------------------~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p 209 (265)
T cd08217 160 LG------------------------------HDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP 209 (265)
T ss_pred cc------------------------------CCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCc
Confidence 21 000112234689999999999988899999999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 988 FNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 988 F~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
|...+...+.+.+..... +.++..++..+.+||.+||+.+|.+||+ +.++++|||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~p~~Rp~---~~~il~~~~~ 265 (265)
T cd08217 210 FTARNQLQLASKIKEGKF--RRIPYRYSSELNEVIKSMLNVDPDKRPS---TEELLQLPLI 265 (265)
T ss_pred ccCcCHHHHHHHHhcCCC--CCCccccCHHHHHHHHHHccCCcccCCC---HHHHhhCCCC
Confidence 998887777777766543 3455788999999999999999999999 8899999995
No 166
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.1e-40 Score=359.36 Aligned_cols=258 Identities=35% Similarity=0.579 Sum_probs=218.9
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|.....+|+|
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 3689999999999999999999999999999999875432 2346678899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||+++++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++....
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~------- 166 (297)
T cd06656 95 MEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------- 166 (297)
T ss_pred ecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEcc-------
Confidence 999999999999875 468999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|++.|+|||.+.+..++.++|+|||||++|+|++|.+||.+.+....
T Consensus 167 -----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~ 223 (297)
T cd06656 167 -----------------------PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (297)
T ss_pred -----------------------CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh
Confidence 000111234688999999999988899999999999999999999999987765443
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...+.....+....+..++..+++||.+||..||.+||+ +.++++||||+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~~il~~~~~~~~ 275 (297)
T cd06656 224 LYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGS---AKELLQHPFLKLA 275 (297)
T ss_pred eeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcC---HHHHhcCchhccc
Confidence 333332222222234678899999999999999999999 8899999999854
No 167
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.8e-40 Score=358.22 Aligned_cols=257 Identities=36% Similarity=0.592 Sum_probs=221.1
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
.+|++++.||.|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|.....+|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 579999999999999999999999999999999875432 33467889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+.+++|..++... .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 96 e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~-------- 166 (296)
T cd06655 96 EYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT-------- 166 (296)
T ss_pred EecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcc--------
Confidence 999999999988754 68999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
..........|++.|+|||.+.+..++.++|||||||++|+|++|..||.+.+.....
T Consensus 167 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~ 224 (296)
T cd06655 167 ----------------------PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224 (296)
T ss_pred ----------------------cccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0001112346899999999999888999999999999999999999999988776555
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..+.....+....+..+++.+.+||.+||..||.+||+ +.+++.||||+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt---~~~il~~~~~~~~ 275 (296)
T cd06655 225 YLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGS---AKELLQHPFLKLA 275 (296)
T ss_pred HHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCC---HHHHhhChHhhhc
Confidence 55544333222344678999999999999999999999 8899999999754
No 168
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.5e-40 Score=346.50 Aligned_cols=255 Identities=33% Similarity=0.536 Sum_probs=213.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeeccc----
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRE---- 831 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~---- 831 (1170)
.++|++.+.||.|+||.||+|.++.+++.||+|++.... ...+.+.+|+.++.++ +||||++++++|....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 478999999999999999999999999999999987643 2346788999999998 6999999999997644
Q ss_pred --ceEEEEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 832 --NLYLVMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 832 --~LyLVMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
.+|+||||+.+++|.+++.. ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 48999999999999999865 347999999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHH
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFE 980 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYE 980 (1170)
.... ..........|++.|+|||++.. ..++.++|||||||+||+
T Consensus 161 ~~~~------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~ 210 (275)
T cd06608 161 AQLD------------------------------STLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIE 210 (275)
T ss_pred eecc------------------------------cchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHH
Confidence 7421 00011223568999999999864 246788999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 981 LLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 981 LLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
|++|.+||...........+..........+..++.++++||.+||..||.+||+ +.++++|||+
T Consensus 211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt---~~~ll~~~~~ 275 (275)
T cd06608 211 LADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPF---MEELLEHPFI 275 (275)
T ss_pred HHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcC---HHHHhcCCCC
Confidence 9999999987766665555554433221222347889999999999999999999 8899999996
No 169
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-40 Score=355.28 Aligned_cols=255 Identities=29% Similarity=0.551 Sum_probs=215.4
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||.||+|++..++..||+|.+.... .......+.+|+.++..++||||+++++.|...+.+|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 46899999999999999999999999999999886531 3344567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 838 EYLNGGDLYSLLRNL---GCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~---~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||++|++|..++... ..+++..+..++.||+.||.|||+ .||+||||||+|||++.++.++|+|||++....
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~---- 154 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV---- 154 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccccc----
Confidence 999999999998763 379999999999999999999996 599999999999999999999999999986421
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC------CCcchhhhHHHHHHHHHHhCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG------HGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~------ys~ksDIWSLGVILYELLTG~pP 987 (1170)
........|++.|+|||++.+.. ++.++|||||||++|+|++|..|
T Consensus 155 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p 206 (286)
T cd06622 155 ----------------------------ASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYP 206 (286)
T ss_pred ----------------------------CCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCC
Confidence 00112346888999999986543 57889999999999999999999
Q ss_pred CCCCCHHHHHHH---HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 988 FNAKTPQQIFDN---IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 988 F~g~~~~ei~qk---Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
|........+.. +.... .+.++..++.++.+||.+||+.+|.+||+ +.+++.||||...
T Consensus 207 f~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~l~~~~~~~~~ 268 (286)
T cd06622 207 YPPETYANIFAQLSAIVDGD--PPTLPSGYSDDAQDFVAKCLNKIPNRRPT---YAQLLEHPWLVKY 268 (286)
T ss_pred CCCcchhhHHHHHHHHhhcC--CCCCCcccCHHHHHHHHHHcccCcccCCC---HHHHhcChhhhhc
Confidence 987665544433 33222 23445678999999999999999999999 7899999999754
No 170
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.3e-39 Score=350.63 Aligned_cols=257 Identities=33% Similarity=0.513 Sum_probs=213.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc----
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCR---- 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~---- 830 (1170)
..++|.+.+.||.|+||.||+|.+..+++.||+|++.... .....+.+|+.++.++ +||||++++++|...
T Consensus 20 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~ 95 (291)
T cd06639 20 PTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV 95 (291)
T ss_pred CCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence 3578999999999999999999999999999999986532 2235667899999988 799999999988653
Q ss_pred -cceEEEEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 831 -ENLYLVMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 831 -~~LyLVMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
..+|+||||++||+|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~ 175 (291)
T cd06639 96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175 (291)
T ss_pred CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence 358999999999999998863 356899999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-----CCCcchhhhHHHHHHHH
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-----GHGATADWWSVGIILFE 980 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-----~ys~ksDIWSLGVILYE 980 (1170)
..... .........|+..|+|||++... .++.++|||||||++|+
T Consensus 176 ~~~~~------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~e 225 (291)
T cd06639 176 AQLTS------------------------------TRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIE 225 (291)
T ss_pred hhccc------------------------------ccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHH
Confidence 74210 00011234688999999998643 36789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 981 LLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 981 LLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
|++|.+||...+....+..+..........+...+..+.+||.+||+.||.+||+ +.++++||||+
T Consensus 226 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps---~~~il~~~~~~ 291 (291)
T cd06639 226 LGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPS---VTHLLEHPFIK 291 (291)
T ss_pred HhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcC---HHHHhcCcccC
Confidence 9999999998777666555554433222223467789999999999999999999 88999999995
No 171
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.5e-40 Score=350.28 Aligned_cols=257 Identities=32% Similarity=0.508 Sum_probs=210.2
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeee-----
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFT----- 828 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fq----- 828 (1170)
...++|++++.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.++..+ +||||+++++++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 90 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVK 90 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccC
Confidence 34578999999999999999999999999999999876532 2235677899999998 6999999999873
Q ss_pred cccceEEEEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 829 CRENLYLVMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 829 d~~~LyLVMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
....+|+||||++|++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||+
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~ 170 (286)
T cd06638 91 NGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGV 170 (286)
T ss_pred CCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCc
Confidence 44579999999999999998753 24688999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHH
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILF 979 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILY 979 (1170)
++... ..........|++.|+|||++.. ..++.++|||||||++|
T Consensus 171 ~~~~~------------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~ 220 (286)
T cd06638 171 SAQLT------------------------------STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAI 220 (286)
T ss_pred eeecc------------------------------cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHH
Confidence 87421 00011223468999999999853 44788999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 980 ELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 980 ELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
+|++|..||........+..+..........+..++..+.+||.+||+.||.+||+ +.++++|+||
T Consensus 221 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~ell~~~~~ 286 (286)
T cd06638 221 ELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPT---VSDLLQHVFI 286 (286)
T ss_pred HHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCC---HHHHhhcccC
Confidence 99999999987766554444332221111123456889999999999999999999 8899999997
No 172
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.6e-40 Score=351.44 Aligned_cols=252 Identities=24% Similarity=0.407 Sum_probs=214.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCC-----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATG-----DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TG-----e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
..++|++++.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.++..++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 80 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE 80 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC
Confidence 4568999999999999999999876555 689999886542 234456788999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~----------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
...|++|||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCC
Confidence 9999999999999999999764 457888999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
+.++|+|||+++..... ..........+++.|+|||++.+..++.++|||||
T Consensus 161 ~~~~L~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~sl 212 (283)
T cd05048 161 LTVKISDFGLSRDIYSA----------------------------DYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF 212 (283)
T ss_pred CcEEECCCcceeecccc----------------------------ccccccCCCcccccccCHHHhccCcCchhhhHHHH
Confidence 99999999998742100 00011223456889999999998889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 975 GIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 975 GVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
||++|||++ |..||.+.+..++...+...... ..+..++.++.+|+.+||+.||.+||++.++
T Consensus 213 G~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i 276 (283)
T cd05048 213 GVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL--PCPEDCPARVYALMIECWNEIPARRPRFKDI 276 (283)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 999999998 99999999988888888765543 3457899999999999999999999994443
No 173
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.2e-39 Score=354.06 Aligned_cols=258 Identities=23% Similarity=0.352 Sum_probs=207.4
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecC----------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRA----------------TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPF 819 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~----------------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPN 819 (1170)
..++|++.++||+|+||.||+|++.. ++..||+|++.... .......+.+|+.+|..++|||
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~n 80 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPN 80 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCC
Confidence 34689999999999999999998532 34579999987542 3445667899999999999999
Q ss_pred EEEEEeeeecccceEEEEeeccCCChHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHhCCee
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-------------------CLDEDMARVYIAELVLALEYLHSLNVI 880 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~-------------------~LSEe~ar~IaaQIL~ALeYLHs~GII 880 (1170)
|+++++++.+.+.+|+||||+.+|+|.+++.... .++...+..++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 9999999999999999999999999999986532 357778889999999999999999999
Q ss_pred eccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHH
Q 001057 881 HRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEIL 960 (1170)
Q Consensus 881 HRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL 960 (1170)
||||||+|||++.++.+||+|||+++..... ..........++..|||||++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~ 212 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAG----------------------------DYYRIQGRAVLPIRWMAWECI 212 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccC----------------------------ceeEecCcCCCCccccCHHHH
Confidence 9999999999999999999999998742100 000112234567899999999
Q ss_pred hcCCCCcchhhhHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcc-----CCCCCCCCccCCHHHHHHHHHhccCCCCCC
Q 001057 961 LGMGHGATADWWSVGIILFELLI--GIPPFNAKTPQQIFDNIMNR-----DIPWPNIPEEMSVEACDLIDKLLTENPVQR 1033 (1170)
Q Consensus 961 ~g~~ys~ksDIWSLGVILYELLT--G~pPF~g~~~~ei~qkIl~~-----~l~fP~ip~~lS~eakDLIkkLLq~DPskR 1033 (1170)
.+..++.++|||||||++|||++ |..||.+.+..+....+... ...++..+..++..+.+||.+||+.||.+|
T Consensus 213 ~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 292 (304)
T cd05096 213 LMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRER 292 (304)
T ss_pred hcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhC
Confidence 98889999999999999999986 67889887776665544321 111222345678999999999999999999
Q ss_pred CChhhHHHHH
Q 001057 1034 LGATGAREVK 1043 (1170)
Q Consensus 1034 pSa~~AeEIL 1043 (1170)
|++.++..+|
T Consensus 293 Ps~~~i~~~l 302 (304)
T cd05096 293 PSFSDIHAFL 302 (304)
T ss_pred cCHHHHHHHH
Confidence 9965554443
No 174
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-39 Score=341.05 Aligned_cols=255 Identities=33% Similarity=0.578 Sum_probs=218.9
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADM--IRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i--~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+|+..+.||+|+||+||+|.+..+++.||+|.+..... ........+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47788999999999999999988999999999875432 2234567788999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||+++++|.+++.+.+.+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~------ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE------ 154 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccc------
Confidence 99999999999998888899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-CCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-HGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
........|++.|+|||.+.... ++.++|+|||||++|+|++|.+||.......
T Consensus 155 -------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~ 209 (258)
T cd06632 155 -------------------------FSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA 209 (258)
T ss_pred -------------------------cccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH
Confidence 00123456899999999998766 8999999999999999999999998776555
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+... ...+.++..++..+.+||.+||+.+|.+||+ +.+++.|||+
T Consensus 210 ~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~~l~~~~~ 258 (258)
T cd06632 210 AVFKIGRS-KELPPIPDHLSDEAKDFILKCLQRDPSLRPT---AAELLEHPFV 258 (258)
T ss_pred HHHHHHhc-ccCCCcCCCcCHHHHHHHHHHhhcCcccCcC---HHHHhcCCCC
Confidence 54444431 2334455678999999999999999999998 8899999996
No 175
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=369.25 Aligned_cols=254 Identities=34% Similarity=0.551 Sum_probs=219.9
Q ss_pred CCCCeEEE-EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec----
Q 001057 756 SIEDFEII-KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTC---- 829 (1170)
Q Consensus 756 ~iedYevl-k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd---- 829 (1170)
..++|.+- ++||-|-.|.|..|.++.||+.+|+|++... ....+|+++.... .|||||.++++|..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccC
Confidence 44677664 5799999999999999999999999987643 3456788877655 49999999988764
Q ss_pred ccceEEEEeeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC---CCcEEEEecCC
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNLGC--LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ---DGHIKLTDFGL 904 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~~~--LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~---dG~VKLsDFGL 904 (1170)
..++.+|||.|+||+|+..|+..+. |+|.++..|++||..|+.|||+.+|.||||||||+|... |..+||+|||+
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 4679999999999999999988764 999999999999999999999999999999999999975 45799999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhC
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 984 (1170)
|+... ......+.|-||+|.|||++....|+..+|+||+|||||-||+|
T Consensus 211 AK~t~-------------------------------~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 211 AKETQ-------------------------------EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred ccccC-------------------------------CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 99521 11233467899999999999999999999999999999999999
Q ss_pred CCCCCCCC----HHHHHHHHhccCCCCCCCC-ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 985 IPPFNAKT----PQQIFDNIMNRDIPWPNIP-EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 985 ~pPF~g~~----~~ei~qkIl~~~l~fP~ip-~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
++||++.. ...+..+|..+.+.||+-. ..+|.+++|+|++||..+|.+|++ +.++++|||+.+.
T Consensus 260 yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlT---I~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 260 YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLT---IEEVMDHPWINQY 328 (400)
T ss_pred CCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhhee---HHHhhcCchhccc
Confidence 99998754 4567889999999998632 368999999999999999999999 8899999999865
No 176
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-39 Score=342.87 Aligned_cols=249 Identities=29% Similarity=0.528 Sum_probs=216.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||++.+..+++.||+|.+.... .....+.+.+|+.+++.++||||+++++.|.+.+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5899999999999999999999999999999986543 23456778899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+++|+|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~------- 151 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLT------- 151 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeec-------
Confidence 99999999998653 458999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|++.|+|||++.+..++.++|+||||+++|+|++|.+||...+....
T Consensus 152 -----------------------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~ 208 (255)
T cd08219 152 -----------------------SPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL 208 (255)
T ss_pred -----------------------ccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH
Confidence 001112245689999999999988899999999999999999999999999888887
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
...+..+... ..+..++..+.+||.+||+.||.+||+ +.+++.
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~---~~~il~ 251 (255)
T cd08219 209 ILKVCQGSYK--PLPSHYSYELRSLIKQMFKRNPRSRPS---ATTILS 251 (255)
T ss_pred HHHHhcCCCC--CCCcccCHHHHHHHHHHHhCCcccCCC---HHHHhh
Confidence 7777665543 244678899999999999999999999 666664
No 177
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-42 Score=393.61 Aligned_cols=261 Identities=32% Similarity=0.565 Sum_probs=233.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
+.|.++..||.|+||.||+|..+.++-..|.|++... ....++.++-|++||..++||+||+|+++|...+.++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 5689999999999999999999999999999988643 4577889999999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||.||-...++-.. ..|++.+++.+++|+|.||+|||+++|||||||..|||++.+|.|+|+|||.+-..
T Consensus 109 EFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn-------- 180 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKN-------- 180 (1187)
T ss_pred eecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccc--------
Confidence 999999998887665 46999999999999999999999999999999999999999999999999986531
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-----CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-----MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-----~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
........+++|||+||||||+.. .+|++++||||||++|.||..+.||-...
T Consensus 181 ----------------------~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel 238 (1187)
T KOG0579|consen 181 ----------------------KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL 238 (1187)
T ss_pred ----------------------hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence 112234567899999999999864 57999999999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChh
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWD 1054 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe 1054 (1170)
+++..+-+|.+...+-..-|..++..+.||+++||.+||..||+ +.++|+||||++++-.
T Consensus 239 npMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~---aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 239 NPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPP---AAQLLKHPFVQNAPSN 298 (1187)
T ss_pred chHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCC---HHHHhhCcccccCCcc
Confidence 99999999988776655557889999999999999999999999 8899999999987643
No 178
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.3e-39 Score=340.89 Aligned_cols=253 Identities=29% Similarity=0.505 Sum_probs=220.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||.|+||.||+|.+..+++.||+|.+..... .......+.+|+.+|+.++||||+++++.+...+.+|+|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999876543 33456788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-cEEEEecCCccccccccCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-HIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-~VKLsDFGLAk~~~~~~~~d 915 (1170)
|++|++|.+++... ..+++..+..++.|++.||+|||++||+|+||||+||+++.++ .++|+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~----- 154 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS----- 154 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC-----
Confidence 99999999999764 3489999999999999999999999999999999999998654 589999999875210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
........|++.|+|||++.+..++.++|+||||+++|+|++|..||.+.+...
T Consensus 155 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~ 208 (256)
T cd08220 155 --------------------------KSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA 208 (256)
T ss_pred --------------------------CccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH
Confidence 011123468999999999998888999999999999999999999999888877
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+...... .++..++.++.+||.+||..||.+||+ +.++++||||
T Consensus 209 ~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt---~~~ll~~p~~ 256 (256)
T cd08220 209 LVLKIMSGTFA--PISDRYSPDLRQLILSMLNLDPSKRPQ---LSQIMAQPIC 256 (256)
T ss_pred HHHHHHhcCCC--CCCCCcCHHHHHHHHHHccCChhhCCC---HHHHhhCCCC
Confidence 77777654432 344678999999999999999999999 8899999997
No 179
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-41 Score=368.79 Aligned_cols=262 Identities=27% Similarity=0.501 Sum_probs=225.4
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEEeeccC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
..||.|+|+.|--|....||..||||++.|.. .....++.+|++++.+++ |+||+.|+++|+++..+|||||-|.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 46999999999999999999999999998863 345678999999999986 99999999999999999999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC---cEEEEecCCccccccccCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG---HIKLTDFGLSKVGLIHSTDDLSAP 919 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG---~VKLsDFGLAk~~~~~~~~d~~a~ 919 (1170)
|.|..+|.+...|++.++..++++|+.||+|||.+||.||||||+|||-.... -||||||.|+.-. +...+.+
T Consensus 161 GplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~--k~~~~~s-- 236 (463)
T KOG0607|consen 161 GPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI--KLNNDCS-- 236 (463)
T ss_pred chHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc--ccCCCCC--
Confidence 99999999999999999999999999999999999999999999999987655 4899999987532 1111110
Q ss_pred CCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-----cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC--
Q 001057 920 SLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-----GMGHGATADWWSVGIILFELLIGIPPFNAKT-- 992 (1170)
Q Consensus 920 sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYELLTG~pPF~g~~-- 992 (1170)
+ .......+.+|+..|||||+.. ...|+..+|.||||||||-||+|++||.|..
T Consensus 237 -----------------p--astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~ 297 (463)
T KOG0607|consen 237 -----------------P--ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA 297 (463)
T ss_pred -----------------C--CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence 0 1112345679999999999874 2458999999999999999999999997642
Q ss_pred -------------HHHHHHHHhccCCCCCCCC-ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChh
Q 001057 993 -------------PQQIFDNIMNRDIPWPNIP-EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWD 1054 (1170)
Q Consensus 993 -------------~~ei~qkIl~~~l~fP~ip-~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe 1054 (1170)
...+++.|..+.+.||+.. ..+|.+++|||..+|..|+.+|++ |.++++|||++.+.-+
T Consensus 298 dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rls---a~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 298 DCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLS---AAQVLNHPWVQRCAPE 370 (463)
T ss_pred cCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhh---hhhccCCccccccchh
Confidence 3578899999999999643 368999999999999999999999 7889999999987533
No 180
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.4e-39 Score=341.59 Aligned_cols=258 Identities=34% Similarity=0.592 Sum_probs=223.2
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|++|.||+|++..+++.||+|++...... .....+.+|+.++..++||||+++++++.....+|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 4699999999999999999999999999999998765321 45577889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+++++|.+++.....+++..+..++.||+.||.|||+ .|++||||+|+||+++.++.++|+|||++....
T Consensus 79 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~------- 151 (264)
T cd06623 79 EYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLE------- 151 (264)
T ss_pred EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecc-------
Confidence 999999999999887889999999999999999999999 999999999999999999999999999987521
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC---CH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK---TP 993 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~---~~ 993 (1170)
..........|+..|+|||++.+..++.++|+||||+++|+|++|.+||... ..
T Consensus 152 -----------------------~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~ 208 (264)
T cd06623 152 -----------------------NTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSF 208 (264)
T ss_pred -----------------------cCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCH
Confidence 0001112346889999999999888999999999999999999999999876 45
Q ss_pred HHHHHHHhccCCCCCCCCcc-CCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEE-MSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~-lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.+....+..... +..+.. ++..+.++|.+||..+|.+||+ +.++++||||+.++
T Consensus 209 ~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~R~~---~~~ll~~~~~~~~~ 263 (264)
T cd06623 209 FELMQAICDGPP--PSLPAEEFSPEFRDFISACLQKDPKKRPS---AAELLQHPFIKKAD 263 (264)
T ss_pred HHHHHHHhcCCC--CCCCcccCCHHHHHHHHHHccCChhhCCC---HHHHHhCHHHHhcc
Confidence 555555554332 223345 8899999999999999999999 88999999998753
No 181
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.3e-40 Score=351.46 Aligned_cols=257 Identities=29% Similarity=0.486 Sum_probs=213.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++++.||.|+||.||+|.+..+++.||+|.+.+.... ....+.+.+|+.++..++||||++++++|.....+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD-KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc-chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 4799999999999999999999999999999998764332 234566788999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+.++.|..+......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~-------- 151 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA-------- 151 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeecc--------
Confidence 999999998887766679999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.
T Consensus 152 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~ 209 (286)
T cd07846 152 ----------------------APGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQ 209 (286)
T ss_pred ----------------------CCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence 000111234688999999998763 478899999999999999999999987765444
Q ss_pred HHHHhccC-------------------CCCCC---------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNRD-------------------IPWPN---------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~-------------------l~fP~---------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+.... ...+. ....++..+.+||.+||+.+|.+||+ +.++++||||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~---~~~il~~~~~ 286 (286)
T cd07846 210 LYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPS---SSQLLHHEFF 286 (286)
T ss_pred HHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchh---HHHHhcCCCC
Confidence 33333100 01111 12357889999999999999999999 7899999998
No 182
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.6e-39 Score=346.82 Aligned_cols=255 Identities=20% Similarity=0.262 Sum_probs=213.4
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeec---CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKR---ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk---~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
..++|++.+.||+|+||.||+|..+ ..+..||+|.++... .......+.+|+.++..++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 80 (266)
T cd05064 3 DNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT 80 (266)
T ss_pred chHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence 4567999999999999999999765 456799999987642 23445678899999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
+||||||+++|+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~- 159 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS- 159 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc-
Confidence 99999999999999999764 5789999999999999999999999999999999999999999999999998753100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g 990 (1170)
..........++..|+|||++.+..++.++|||||||++|||++ |..||.+
T Consensus 160 ----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 160 ----------------------------EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred ----------------------------cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 00001112345678999999999999999999999999999775 9999999
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.+..++...+..+.. .+ .+..++..+.+++.+||+.+|.+||++.++.+++
T Consensus 212 ~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l 262 (266)
T cd05064 212 MSGQDVIKAVEDGFR-LP-APRNCPNLLHQLMLDCWQKERGERPRFSQIHSIL 262 (266)
T ss_pred CCHHHHHHHHHCCCC-CC-CCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHH
Confidence 888888777765432 22 3567899999999999999999999965555544
No 183
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.2e-39 Score=348.82 Aligned_cols=255 Identities=30% Similarity=0.506 Sum_probs=211.1
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec-----
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTC----- 829 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd----- 829 (1170)
..+.|++.+.||.|+||.||+|++..+++.||+|++.... .....+..|+.++..+ +||||++++++|..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 3468999999999999999999999999999999986542 3345678899999888 69999999998853
Q ss_pred -ccceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcc
Q 001057 830 -RENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSK 906 (1170)
Q Consensus 830 -~~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk 906 (1170)
...+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 45789999999999999999753 458899999999999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-----cCCCCcchhhhHHHHHHHHH
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-----GMGHGATADWWSVGIILFEL 981 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYEL 981 (1170)
... ..........|++.|+|||++. ...++.++|||||||++|+|
T Consensus 170 ~~~------------------------------~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el 219 (282)
T cd06636 170 QLD------------------------------RTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219 (282)
T ss_pred hhh------------------------------ccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHH
Confidence 421 0001123457899999999986 34578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 982 LIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 982 LTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
++|.+||...........+...... ......++.++.+||.+||..||.+||+ +.++++||||
T Consensus 220 ~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~---~~ell~~~~~ 282 (282)
T cd06636 220 AEGAPPLCDMHPMRALFLIPRNPPP-KLKSKKWSKKFIDFIEGCLVKNYLSRPS---TEQLLKHPFI 282 (282)
T ss_pred HhCCCCccccCHHhhhhhHhhCCCC-CCcccccCHHHHHHHHHHhCCChhhCcC---HHHHhcCCCC
Confidence 9999999877655544444332211 1123468899999999999999999999 8899999997
No 184
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.7e-40 Score=352.85 Aligned_cols=259 Identities=34% Similarity=0.550 Sum_probs=215.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI--RKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~--~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+|++++.||.|+||.||+|.+..+|+.||||.+...... .......+..|+.++..++|+||+++++++.+.+.+|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488999999999999999999999999999999765433 123345677899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+ +|+|..++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.+|.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~----- 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS----- 154 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC-----
Confidence 9999 899999998766 799999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.........+++.|+|||++.+ ..++.++|+|||||++|+|++|.+||.+.+..
T Consensus 155 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~ 209 (298)
T cd07841 155 -------------------------PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI 209 (298)
T ss_pred -------------------------CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH
Confidence 0011122356889999999865 45788999999999999999999999887765
Q ss_pred HHHHHHhccCC-----CC---------------C-----CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 995 QIFDNIMNRDI-----PW---------------P-----NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 995 ei~qkIl~~~l-----~f---------------P-----~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
+.+..+..... .+ + ......+.++.+||.+||.+||.+||+ +.+++.||||+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s---~~e~l~~~~~~ 286 (298)
T cd07841 210 DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT---ARQALEHPYFS 286 (298)
T ss_pred HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC---HHHHhhCcccc
Confidence 55555432100 00 0 011345788999999999999999999 88999999998
Q ss_pred CC
Q 001057 1050 NI 1051 (1170)
Q Consensus 1050 ~i 1051 (1170)
+.
T Consensus 287 ~~ 288 (298)
T cd07841 287 ND 288 (298)
T ss_pred CC
Confidence 75
No 185
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.5e-40 Score=348.52 Aligned_cols=257 Identities=35% Similarity=0.565 Sum_probs=214.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.++||||+++++++.....+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 589999999999999999999999999999998765422 3345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|+ +++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~------ 152 (286)
T cd07832 80 YM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEE------ 152 (286)
T ss_pred cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC------
Confidence 99 99999998653 56999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........|+..|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....
T Consensus 153 -----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~ 209 (286)
T cd07832 153 -----------------------EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ 209 (286)
T ss_pred -----------------------CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH
Confidence 00111234689999999998754 468899999999999999999999988777665
Q ss_pred HHHHhccC-------------------CCCC--------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 997 FDNIMNRD-------------------IPWP--------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 997 ~qkIl~~~-------------------l~fP--------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
+..+...- ..++ ......+.++.+||.+||..||.+||+ +.+++.||||.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~---~~~~l~h~~~~ 286 (286)
T cd07832 210 LAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS---AAEALRHPYFT 286 (286)
T ss_pred HHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC---HHHHhhCcCcC
Confidence 55544310 0111 111246789999999999999999999 88999999994
No 186
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.7e-40 Score=346.11 Aligned_cols=255 Identities=31% Similarity=0.568 Sum_probs=218.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+++++.++||||+++++.+.....+|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 468889999999999999999999999999999876532 245567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.++|+|||++....
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~------ 152 (265)
T cd06605 79 EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLV------ 152 (265)
T ss_pred EecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhH------
Confidence 999999999999876 789999999999999999999999 999999999999999999999999999986421
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC----
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK---- 991 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~---- 991 (1170)
. .......|+..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus 153 ------------------------~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~ 206 (265)
T cd06605 153 ------------------------N--SLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP 206 (265)
T ss_pred ------------------------H--HHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc
Confidence 0 0011267889999999999989999999999999999999999999764
Q ss_pred -CHHHHHHHHhccCCCCCCCCcc-CCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 992 -TPQQIFDNIMNRDIPWPNIPEE-MSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 992 -~~~ei~qkIl~~~l~fP~ip~~-lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...+..+.+..... +.++.. ++.++.+||.+||..||.+||+ +.+++.||||+..
T Consensus 207 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~ll~~~~~~~~ 263 (265)
T cd06605 207 DGIFELLQYIVNEPP--PRLPSGKFSPDFQDFVNLCLIKDPRERPS---YKELLEHPFIKKY 263 (265)
T ss_pred ccHHHHHHHHhcCCC--CCCChhhcCHHHHHHHHHHcCCCchhCcC---HHHHhhCchhhcc
Confidence 23344444444322 223333 8899999999999999999999 8899999999753
No 187
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.3e-40 Score=351.52 Aligned_cols=256 Identities=28% Similarity=0.517 Sum_probs=217.7
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++++.||+|+||+||++.+..+|+.||+|++.... .......+.+|++++..++||||+++++++.....+|+
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence 4568999999999999999999999999999999886532 23445778899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||+++++|..++...+.+++..++.++.|++.||.|||+ .||+||||||+||+++.++.++|+|||++....
T Consensus 81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~----- 155 (284)
T cd06620 81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI----- 155 (284)
T ss_pred EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchh-----
Confidence 99999999999999888889999999999999999999997 699999999999999999999999999986320
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.......+||..|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 156 ---------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 156 ---------------------------NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred ---------------------------hhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 00112357899999999998888999999999999999999999999865442
Q ss_pred -----------HHHHHHhccCCCCCCCCc-cCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 995 -----------QIFDNIMNRDIPWPNIPE-EMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 995 -----------ei~qkIl~~~l~fP~ip~-~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
+....+..... +.++. .++.++.+||.+||+.||.+||+ +.|+++|+||..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rpt---~~e~~~~~~~~~ 271 (284)
T cd06620 209 DDGQDDPMGILDLLQQIVQEPP--PRLPSSDFPEDLRDFVDACLLKDPTERPT---PQQLCAMPPFIQ 271 (284)
T ss_pred hhhhhhhhHHHHHHHHHhhccC--CCCCchhcCHHHHHHHHHHhcCCcccCcC---HHHHhcCccccc
Confidence 23333333221 12222 37889999999999999999999 889999999965
No 188
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.8e-39 Score=343.50 Aligned_cols=259 Identities=32% Similarity=0.551 Sum_probs=215.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc-------cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI-------RKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~-------~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+...... .....+.+..|+.++..++||||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 588999999999999999999999999999988642111 1223457888999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
.+++||||+++++|.+++.+.+.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 161 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI 161 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence 99999999999999999998888999999999999999999999999999999999999999999999999998742100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC--CCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG--HGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~--ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
..........|+..|+|||++.+.. ++.++|+||||+++|+|++|..||.
T Consensus 162 ----------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~ 213 (272)
T cd06629 162 ----------------------------YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWS 213 (272)
T ss_pred ----------------------------ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCc
Confidence 0001123456899999999998754 7889999999999999999999998
Q ss_pred CCCHHHHHHHHhccC--CCCC-CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 990 AKTPQQIFDNIMNRD--IPWP-NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~--l~fP-~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.....+.+..+.... ..++ .....++.++.+||.+||..+|.+||+ +.++++||||
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~~il~~~~~ 272 (272)
T cd06629 214 DEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPT---ARELLQHPFI 272 (272)
T ss_pred CcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCC---HHHHhhCCCC
Confidence 666554444433222 1222 122356899999999999999999999 8899999997
No 189
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2e-39 Score=348.51 Aligned_cols=256 Identities=29% Similarity=0.538 Sum_probs=206.4
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+++|++.+.||.|+||.||+|.++.+++.||||.+..... ......+.+|+.+++.++||||+++++++.+.+.+|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999875431 12234567899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 82 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----- 155 (291)
T cd07844 82 FEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSV----- 155 (291)
T ss_pred EecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCC-----
Confidence 99997 4999988764 4689999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCC-H
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKT-P 993 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~-~ 993 (1170)
.........++..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.. .
T Consensus 156 -------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~ 210 (291)
T cd07844 156 -------------------------PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV 210 (291)
T ss_pred -------------------------CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence 0000112346889999999876 458899999999999999999999997665 3
Q ss_pred HHHHHHHhcc-------------------CCCCCC--------CCccCC--HHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 994 QQIFDNIMNR-------------------DIPWPN--------IPEEMS--VEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 994 ~ei~qkIl~~-------------------~l~fP~--------ip~~lS--~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+....+... ...++. ....++ .++.+||.+||+.||.+||+ +.+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps---~~e~l~ 287 (291)
T cd07844 211 EDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS---AAEAMK 287 (291)
T ss_pred HHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC---HHHHhc
Confidence 3333222110 000000 001234 88899999999999999999 889999
Q ss_pred CCCC
Q 001057 1045 HPFF 1048 (1170)
Q Consensus 1045 HPfF 1048 (1170)
||||
T Consensus 288 ~~~f 291 (291)
T cd07844 288 HPYF 291 (291)
T ss_pred CCCC
Confidence 9998
No 190
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.9e-39 Score=353.43 Aligned_cols=261 Identities=32% Similarity=0.503 Sum_probs=214.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cce
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENL 833 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~L 833 (1170)
..++|++.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.++.+++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 46789999999999999999999999999999999875432 122233456799999999999999999998765 568
Q ss_pred EEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~- 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP- 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc-
Confidence 99999996 5898888763 56999999999999999999999999999999999999999999999999998752100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
........+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 162 -----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~ 212 (309)
T cd07845 162 -----------------------------AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212 (309)
T ss_pred -----------------------------cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 001112345789999999876 45789999999999999999999999998
Q ss_pred CHHHHHHHHhccC-------------------CCCCCC--------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRD-------------------IPWPNI--------PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~-------------------l~fP~i--------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+..+.+..+.... ...+.. ....++.+.+||.+||+.||.+||+ +.+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t---~~~il~ 289 (309)
T cd07845 213 SEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRAT---AEEALE 289 (309)
T ss_pred CHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcC---HHHHhc
Confidence 8887777665411 000100 0135889999999999999999999 889999
Q ss_pred CCCCCCC
Q 001057 1045 HPFFKNI 1051 (1170)
Q Consensus 1045 HPfF~~i 1051 (1170)
||||++.
T Consensus 290 h~~f~~~ 296 (309)
T cd07845 290 SSYFKEK 296 (309)
T ss_pred ChhhccC
Confidence 9999864
No 191
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.7e-39 Score=345.94 Aligned_cols=255 Identities=25% Similarity=0.410 Sum_probs=214.5
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRA-----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~-----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
..+|.+++.||+|+||.||+|.+.. +++.||+|++.... .....+.+.+|+++|..++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 4679999999999999999998753 46899999987543 2334578899999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcE
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLG--------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHI 897 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~--------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~V 897 (1170)
.+|+||||+++++|.+++...+ .+++..+..++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999999999997542 37888999999999999999999999999999999999999999
Q ss_pred EEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHH
Q 001057 898 KLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGII 977 (1170)
Q Consensus 898 KLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVI 977 (1170)
||+|||+++..... ..........+++.|+|||++.+..++.++|||||||+
T Consensus 162 kl~d~g~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 213 (280)
T cd05049 162 KIGDFGMSRDVYTT----------------------------DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVV 213 (280)
T ss_pred EECCcccceecccC----------------------------cceecCCCCcccceecChhhhccCCcchhhhHHHHHHH
Confidence 99999998742100 00001123346789999999999999999999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 978 LFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 978 LYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
+|||++ |..||.+.+..+....+..+.... .+..++..+.+||.+||+.||.+||++.++.+.+
T Consensus 214 l~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l 278 (280)
T cd05049 214 LWEIFTYGKQPWYGLSNEEVIECITQGRLLQ--RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278 (280)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence 999998 999999988888888887655433 3467899999999999999999999955554443
No 192
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-39 Score=348.05 Aligned_cols=258 Identities=32% Similarity=0.555 Sum_probs=222.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.++..++||||+++++++.+...+|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 458889999999999999999999999999999875432 345678889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+.||+|.+++.. +.+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~------- 153 (277)
T cd06640 82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD------- 153 (277)
T ss_pred ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccC-------
Confidence 99999999999875 5689999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.........|+..|+|||++.+..++.++|+|||||++|+|++|.+||...+.....
T Consensus 154 -----------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 210 (277)
T cd06640 154 -----------------------TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL 210 (277)
T ss_pred -----------------------CccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh
Confidence 001112346888999999999888999999999999999999999999988777666
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW 1053 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw 1053 (1170)
..+..... +.++..++..+.+||.+||+.+|.+||+ +.++++||||.....
T Consensus 211 ~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~~~ 261 (277)
T cd06640 211 FLIPKNNP--PTLTGEFSKPFKEFIDACLNKDPSFRPT---AKELLKHKFIVKNAK 261 (277)
T ss_pred hhhhcCCC--CCCchhhhHHHHHHHHHHcccCcccCcC---HHHHHhChHhhhcch
Confidence 55543322 3344578899999999999999999999 889999999987643
No 193
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.9e-39 Score=352.67 Aligned_cols=249 Identities=26% Similarity=0.478 Sum_probs=191.4
Q ss_pred EEeccCCCeEEEEeeecC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--ccceEEEEee
Q 001057 764 KPISQGAFGRVFLARKRA--TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC--RENLYLVMEY 839 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~--TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd--~~~LyLVMEY 839 (1170)
.+||+|+||+||+|+.+. ++..||+|.+..... ...+.+|+.+|..++||||++++++|.. ...+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 668999998875432 2356789999999999999999998854 5678999999
Q ss_pred ccCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEe----CCCCcEEEEecCCcc
Q 001057 840 LNGGDLYSLLRNL---------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLI----GQDGHIKLTDFGLSK 906 (1170)
Q Consensus 840 ~~GGSL~dlLk~~---------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILL----d~dG~VKLsDFGLAk 906 (1170)
+. ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+|+
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 95 5888887522 248899999999999999999999999999999999999 566799999999997
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCC
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGI 985 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~ 985 (1170)
...... .........+||+.|+|||++.+. .++.++|||||||++|||++|.
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~ 213 (317)
T cd07867 161 LFNSPL---------------------------KPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 213 (317)
T ss_pred ccCCCc---------------------------ccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCC
Confidence 531000 000112345789999999999874 5789999999999999999999
Q ss_pred CCCCCCCHH---------HHHHHHhcc--------------CCCCC---------------------CCCccCCHHHHHH
Q 001057 986 PPFNAKTPQ---------QIFDNIMNR--------------DIPWP---------------------NIPEEMSVEACDL 1021 (1170)
Q Consensus 986 pPF~g~~~~---------ei~qkIl~~--------------~l~fP---------------------~ip~~lS~eakDL 1021 (1170)
+||...... .....+... ...++ ......+..+.+|
T Consensus 214 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (317)
T cd07867 214 PIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLL 293 (317)
T ss_pred CCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHH
Confidence 999754321 111111100 00000 0011345678899
Q ss_pred HHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 1022 IDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 1022 IkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
|.+||+.||.+||| |.|+|+||||
T Consensus 294 l~~~l~~dP~~R~t---~~e~l~hp~f 317 (317)
T cd07867 294 LQKLLTMDPTKRIT---SEQALQDPYF 317 (317)
T ss_pred HHHHhccCcccccC---HHHHhcCCCC
Confidence 99999999999999 8899999998
No 194
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.1e-39 Score=338.33 Aligned_cols=250 Identities=52% Similarity=0.961 Sum_probs=222.0
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||.|+||.||++.+..+++.||+|++.+...........+..|+.+++.++||||+++++.+.....+|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 69999999999999989999999999887665556777899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCC
Q 001057 846 YSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGG 925 (1170)
Q Consensus 846 ~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~ 925 (1170)
.+++.....+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~--------------- 145 (250)
T cd05123 81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS--------------- 145 (250)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceeccc---------------
Confidence 99999887899999999999999999999999999999999999999999999999999874210
Q ss_pred ccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCC
Q 001057 926 FLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDI 1005 (1170)
Q Consensus 926 ~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l 1005 (1170)
.........|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+....++.+.....
T Consensus 146 ---------------~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 210 (250)
T cd05123 146 ---------------EGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPL 210 (250)
T ss_pred ---------------CCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCC
Confidence 00112345688999999999988889999999999999999999999998888777888777555
Q ss_pred CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 1006 PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 1006 ~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.++ ..++..+.+||.+||..||.+||++..+.++++||||
T Consensus 211 ~~~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 211 RFP---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCC---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 544 6679999999999999999999995445999999998
No 195
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.4e-39 Score=340.42 Aligned_cols=252 Identities=28% Similarity=0.472 Sum_probs=212.1
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|++..+++.||||.+.............+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57999999999999999999999999999999987655555666678899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 838 EYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 838 EY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~---- 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS---- 157 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceecc----
Confidence 99999999988853 2458999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC-
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT- 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~- 992 (1170)
..........|++.|+|||++.+..++.++|+||||+++|+|++|..||....
T Consensus 158 --------------------------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~ 211 (267)
T cd08228 158 --------------------------SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 211 (267)
T ss_pred --------------------------chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc
Confidence 00111223568899999999998889999999999999999999999997653
Q ss_pred -HHHHHHHHhccCCCCCCC-CccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 993 -PQQIFDNIMNRDIPWPNI-PEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 993 -~~ei~qkIl~~~l~fP~i-p~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
.......+.... ++.. ....+..+.+||.+||+.+|.+||++..+.+
T Consensus 212 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 212 NLFSLCQKIEQCD--YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred cHHHHHHHHhcCC--CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 344555554333 2222 2467889999999999999999999544433
No 196
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.4e-39 Score=347.95 Aligned_cols=257 Identities=31% Similarity=0.517 Sum_probs=208.2
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccc----
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCREN---- 832 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~---- 832 (1170)
++|++.+.||.|+||.||+|.+..+++.||||++.... ........+.+|+.++..+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 46999999999999999999999999999999876542 12223456788999999995 6999999999887665
Q ss_pred -eEEEEeeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCc
Q 001057 833 -LYLVMEYLNGGDLYSLLRNL-----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLS 905 (1170)
Q Consensus 833 -LyLVMEY~~GGSL~dlLk~~-----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLA 905 (1170)
+|+||||+.+ +|..++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999975 898888643 35799999999999999999999999999999999999998 889999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG 984 (1170)
...... ........+++.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 159 ~~~~~~------------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 208 (295)
T cd07837 159 RAFSIP------------------------------VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRK 208 (295)
T ss_pred eecCCC------------------------------ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcC
Confidence 742100 001112357889999999875 4578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccC-----CCC------------CC--------CCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 985 IPPFNAKTPQQIFDNIMNRD-----IPW------------PN--------IPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~-----l~f------------P~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.+||.+.+....+..+...- ..+ +. ....++.++.+||.+||..||.+||+ +
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~---~ 285 (295)
T cd07837 209 QPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS---A 285 (295)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC---H
Confidence 99999877665554443210 000 00 01357889999999999999999999 8
Q ss_pred HHHHcCCCCC
Q 001057 1040 REVKQHPFFK 1049 (1170)
Q Consensus 1040 eEILqHPfF~ 1049 (1170)
.+++.||||+
T Consensus 286 ~eil~~~~~~ 295 (295)
T cd07837 286 KAALTHPYFD 295 (295)
T ss_pred HHHhcCCCcC
Confidence 8999999995
No 197
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.2e-39 Score=345.68 Aligned_cols=258 Identities=33% Similarity=0.562 Sum_probs=214.2
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|.++.+++.||+|++..... .....+.+.+|+.+++.++|+||++++++|...+.+|+||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 469999999999999999999999999999998875432 2334567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||++++.|..++.....+++..+..++.||+.||.|||++||+||||+|+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~------ 153 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRAR------ 153 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCC------
Confidence 99998777776666677999999999999999999999999999999999999999999999999998753100
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........|+..|+|||++.+. .++.++||||||+++|+|++|.+||.+.+..+.
T Consensus 154 -----------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~ 210 (288)
T cd07833 154 -----------------------PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ 210 (288)
T ss_pred -----------------------ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 00112235688999999999888 789999999999999999999999987765544
Q ss_pred HHHHhccC-------------------CCCC----------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 997 FDNIMNRD-------------------IPWP----------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 997 ~qkIl~~~-------------------l~fP----------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
...+.... ..++ ..+..++.++.+||.+||..+|.+||+ +.++++|||
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~~il~~~~ 287 (288)
T cd07833 211 LYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLT---CDELLQHPY 287 (288)
T ss_pred HHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhccc---HHHHhcCCC
Confidence 33322100 0010 012345889999999999999999999 889999999
Q ss_pred C
Q 001057 1048 F 1048 (1170)
Q Consensus 1048 F 1048 (1170)
|
T Consensus 288 f 288 (288)
T cd07833 288 F 288 (288)
T ss_pred C
Confidence 8
No 198
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.2e-39 Score=344.23 Aligned_cols=258 Identities=32% Similarity=0.522 Sum_probs=207.5
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHH-HHhcCCCcEEEEEeeeecccceEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNI-LISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieI-LskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
++|++++.||.|+||.||+|+++.+|+.||||.+..... ... ...+..|..+ ++.++||||+++++++.....+|+|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~-~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-SQE-QKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-cHH-HHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876432 222 2345556655 5667899999999999999999999
Q ss_pred EeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 837 MEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSL-NVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~-GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
|||++ |+|.+++.. ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||++....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~-- 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV-- 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccc--
Confidence 99996 688887754 24689999999999999999999997 99999999999999999999999999987421
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc----CCCCcchhhhHHHHHHHHHHhCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG----MGHGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g----~~ys~ksDIWSLGVILYELLTG~pP 987 (1170)
. ........|+..|+|||++.+ ..++.++|+|||||++|+|++|..|
T Consensus 156 ----------------------------~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 206 (283)
T cd06617 156 ----------------------------D-SVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFP 206 (283)
T ss_pred ----------------------------c-ccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCC
Confidence 0 001122468899999999865 4568899999999999999999999
Q ss_pred CCCCC-HHHHHHHHhccC-CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChh
Q 001057 988 FNAKT-PQQIFDNIMNRD-IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWD 1054 (1170)
Q Consensus 988 F~g~~-~~ei~qkIl~~~-l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe 1054 (1170)
|.... ..+.+..+.... ...+ ...++.++.+||.+||..+|.+||+ +.++++||||......
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~~~~ 270 (283)
T cd06617 207 YDSWKTPFQQLKQVVEEPSPQLP--AEKFSPEFQDFVNKCLKKNYKERPN---YPELLQHPFFELHLSK 270 (283)
T ss_pred CCccccCHHHHHHHHhcCCCCCC--ccccCHHHHHHHHHHccCChhhCcC---HHHHhcCchhhhcccc
Confidence 97532 223333333322 2222 1357899999999999999999999 7899999999986544
No 199
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.7e-39 Score=337.11 Aligned_cols=259 Identities=35% Similarity=0.603 Sum_probs=216.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||+|.+..+++.||+|++...... ......+..|+.+++.++|+||+++++.+...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 589999999999999999999999999999998866432 4567889999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+++++|.+++.....+++..++.++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~----- 154 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT----- 154 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC-----
Confidence 999999999998877799999999999999999999999999999999999999999999999999875310000
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC---CCcchhhhHHHHHHHHHHhCCCCCCCCC-HH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG---HGATADWWSVGIILFELLIGIPPFNAKT-PQ 994 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~---ys~ksDIWSLGVILYELLTG~pPF~g~~-~~ 994 (1170)
..........|++.|+|||++.+.. ++.++|||||||++|+|++|..||.+.. ..
T Consensus 155 ---------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~ 213 (264)
T cd06626 155 ---------------------TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF 213 (264)
T ss_pred ---------------------cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH
Confidence 0000022356889999999998766 8899999999999999999999997653 33
Q ss_pred HHHHHHhccC-CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNRD-IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~~-l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.+...+.... ..+|. ...++..+.+||.+||+.+|.+||+ +.+++.|||+
T Consensus 214 ~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~---~~~i~~~~~~ 264 (264)
T cd06626 214 QIMFHVGAGHKPPIPD-SLQLSPEGKDFLDRCLESDPKKRPT---ASELLQHPFV 264 (264)
T ss_pred HHHHHHhcCCCCCCCc-ccccCHHHHHHHHHHccCCcccCCC---HHHHhcCCCC
Confidence 3333333322 12221 1245899999999999999999999 8899999996
No 200
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.9e-39 Score=340.94 Aligned_cols=252 Identities=31% Similarity=0.458 Sum_probs=206.2
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
+.....||+|+||.||+|++..++..||+|.+.... ....+.+.+|+.++..++|+||+++++++...+.+|+||||
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 334458999999999999999999999999876542 34456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCccccccccCCC
Q 001057 840 LNGGDLYSLLRNL-GCL--DEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 840 ~~GGSL~dlLk~~-~~L--SEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
+++++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++.....
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~----- 161 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG----- 161 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc-----
Confidence 9999999999764 455 88889999999999999999999999999999999986 67999999999864210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC--CCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG--HGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~--ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.........|++.|+|||++.+.. ++.++|+||||+++|+|++|.+||.....
T Consensus 162 -------------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 162 -------------------------INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred -------------------------CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 000112245789999999987643 78899999999999999999999976432
Q ss_pred HH-HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 994 QQ-IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 994 ~e-i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.. ....+.. .-..+.++..++.++++||.+||+.+|.+||+ +.+++.||||
T Consensus 217 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~ll~~~~~ 268 (268)
T cd06624 217 PQAAMFKVGM-FKIHPEIPESLSAEAKNFILRCFEPDPDKRAS---AHDLLQDPFL 268 (268)
T ss_pred hhhhHhhhhh-hccCCCCCcccCHHHHHHHHHHcCCCchhCCC---HHHHHhCCCC
Confidence 21 1111111 11123455678999999999999999999999 8899999997
No 201
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.9e-39 Score=360.38 Aligned_cols=257 Identities=28% Similarity=0.471 Sum_probs=211.1
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR----- 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~----- 830 (1170)
..++|++++.||+|+||.||+|++..+|+.||||++.+.. ........+.+|+.++..++||||++++++|...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3578999999999999999999999999999999986542 2233456677899999999999999999988654
Q ss_pred -cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 -ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 -~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..+|+||||+. ++|...+... +++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 35799999995 5888888654 8999999999999999999999999999999999999999999999999987421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 170 -------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 170 -------------------------------TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred -------------------------------CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 0001223468899999999999999999999999999999999999998
Q ss_pred CCCHHHHHHHHhccC----------------------C-----C---------CCCC----CccCCHHHHHHHHHhccCC
Q 001057 990 AKTPQQIFDNIMNRD----------------------I-----P---------WPNI----PEEMSVEACDLIDKLLTEN 1029 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~----------------------l-----~---------fP~i----p~~lS~eakDLIkkLLq~D 1029 (1170)
+.+....+..+...- . . ++.. +...+..+++||.+||+.|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 298 (353)
T cd07850 219 GTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID 298 (353)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCC
Confidence 877655444442200 0 0 0000 1134667899999999999
Q ss_pred CCCCCChhhHHHHHcCCCCCC
Q 001057 1030 PVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 1030 PskRpSa~~AeEILqHPfF~~ 1050 (1170)
|.+||+ +.|+|.||||+.
T Consensus 299 P~~R~t---~~eiL~~~~~~~ 316 (353)
T cd07850 299 PEKRIS---VDDALQHPYINV 316 (353)
T ss_pred hhhCcC---HHHHhcChhHhh
Confidence 999999 889999999984
No 202
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.9e-39 Score=333.01 Aligned_cols=254 Identities=34% Similarity=0.639 Sum_probs=223.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||++.+..++..||+|++..... .......+..|+++++.++|||++++++.+.....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58999999999999999999999999999999876432 23456678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 839 YLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|+++++|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~----- 154 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLS----- 154 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecc-----
Confidence 99999999999764 679999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
..........|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+..
T Consensus 155 -------------------------~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~ 209 (258)
T cd08215 155 -------------------------STVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL 209 (258)
T ss_pred -------------------------cCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH
Confidence 0001123457899999999999888999999999999999999999999988888
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.+...+..... +.++..++..+.++|.+||..+|.+||+ +.++++||||
T Consensus 210 ~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp~---~~~ll~~~~~ 258 (258)
T cd08215 210 ELALKILKGQY--PPIPSQYSSELRNLVSSLLQKDPEERPS---IAQILQSPFI 258 (258)
T ss_pred HHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcC---HHHHhcCCCC
Confidence 87777765543 3455688999999999999999999999 8899999997
No 203
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.7e-39 Score=367.91 Aligned_cols=258 Identities=23% Similarity=0.349 Sum_probs=209.1
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRAT-----GDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFT 828 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~T-----Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fq 828 (1170)
...++|++.+.||+|+||.||+|++..+ +..||+|++.... .......+.+|+.+|+.+ +|||||+++++|.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 4456899999999999999999986443 4589999987643 233456788999999999 8999999999999
Q ss_pred cccceEEEEeeccCCChHHHHHhc--------------------------------------------------------
Q 001057 829 CRENLYLVMEYLNGGDLYSLLRNL-------------------------------------------------------- 852 (1170)
Q Consensus 829 d~~~LyLVMEY~~GGSL~dlLk~~-------------------------------------------------------- 852 (1170)
....+|+|||||.+|+|.+++...
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 999999999999999999998642
Q ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 853 --------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 853 --------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~------- 265 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMND------- 265 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCC-------
Confidence 13778889999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIF 997 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~ 997 (1170)
..........+++.|||||++.+..++.++|||||||++|+|++ |..||........+
T Consensus 266 ---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~ 324 (374)
T cd05106 266 ---------------------SNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKF 324 (374)
T ss_pred ---------------------cceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHH
Confidence 00001122345678999999998899999999999999999997 99999877655444
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..+....... ..+..+++++.+||.+||+.||.+||++.++.++|
T Consensus 325 ~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l 369 (374)
T cd05106 325 YKMVKRGYQM-SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLI 369 (374)
T ss_pred HHHHHcccCc-cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 4444433322 23456789999999999999999999966555544
No 204
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.8e-39 Score=347.03 Aligned_cols=255 Identities=30% Similarity=0.533 Sum_probs=209.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|+.++.||.|+||.||+|+++.+|+.||||.+..... .......+.+|++++++++||||+++++++.+.+.+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48999999999999999999999999999998865432 22334578889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+. ++|..++... ..+++..++.++.||+.||+|||++||+||||+|+||+++.++.+||+|||++.....
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~------ 152 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV------ 152 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhccc------
Confidence 995 6899888653 5689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-CCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-HGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
.........+++.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+...
T Consensus 153 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~ 208 (284)
T cd07860 153 ------------------------PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 208 (284)
T ss_pred ------------------------CccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 000112235788999999887644 5888999999999999999999998877654
Q ss_pred HHHHHhccC------------------CCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRD------------------IPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~------------------l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+.... ..++. ....++.++++||.+||+.||.+||+ +.++++||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~~l~~~~f 284 (284)
T cd07860 209 QLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS---AKAALAHPFF 284 (284)
T ss_pred HHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCC---HHHHhcCCCC
Confidence 443332210 00110 11347889999999999999999999 8899999998
No 205
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=5.8e-39 Score=346.92 Aligned_cols=256 Identities=30% Similarity=0.556 Sum_probs=220.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|...+.||.|++|.||++.+..+++.||+|.+... .....+.+.+|+.++..++||||++++++|...+..|+|||
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 466667999999999999999999999999987643 22344668899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+.|++|.+++.. +.+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 97 ~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~--------- 166 (285)
T cd06648 97 FLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVS--------- 166 (285)
T ss_pred ccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhc---------
Confidence 9999999999987 679999999999999999999999999999999999999999999999999876421
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
..........|++.|+|||++.+..++.++|+|||||++|+|++|..||.+.+....+.
T Consensus 167 ---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~ 225 (285)
T cd06648 167 ---------------------KEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK 225 (285)
T ss_pred ---------------------cCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH
Confidence 00011123568999999999998889999999999999999999999999888877777
Q ss_pred HHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 999 NIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 999 kIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.+.....+....+..++..+.+||.+||+.+|.+||+ +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt---~~~il~~~~~~~~ 275 (285)
T cd06648 226 RIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRAT---AAELLNHPFLAKA 275 (285)
T ss_pred HHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcC---HHHHccCcccccC
Confidence 7765543332223457899999999999999999998 8899999999864
No 206
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.8e-39 Score=343.88 Aligned_cols=254 Identities=29% Similarity=0.526 Sum_probs=211.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++++.||.|++|.||+|++..+|+.||||++..... ......+.+|+.+++.++||||++++++|.+.+.+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58999999999999999999999999999999876432 2234567789999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 839 YLNGGDLYSLLRNL---GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~---~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|+.+ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~----- 152 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGI----- 152 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcC-----
Confidence 9974 899888754 3589999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.........+|+.|++||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus 153 -------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~ 207 (284)
T cd07836 153 -------------------------PVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE 207 (284)
T ss_pred -------------------------CccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 00011234578999999998764 5788999999999999999999999988776
Q ss_pred HHHHHHhccC------------------CCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNRD------------------IPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~~------------------l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
+.+..+.... ..++. +...++..++++|.+||+.||.+||+ +.++++||||
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~~l~~~~f 284 (284)
T cd07836 208 DQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS---AHDALQHPWF 284 (284)
T ss_pred HHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC---HHHHhcCCCC
Confidence 6655543210 00110 11245788999999999999999999 8899999998
No 207
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=7.1e-39 Score=340.06 Aligned_cols=254 Identities=23% Similarity=0.377 Sum_probs=215.4
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
...+|.+.+.||.|+||.||+|.++.+++.||+|++.+.. .....+.+|+.++..++||||+++++++.....+|+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 79 (263)
T cd05052 4 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 79 (263)
T ss_pred chHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEE
Confidence 3457999999999999999999999999999999987542 234678899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~-- 157 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-- 157 (263)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc--
Confidence 99999999999999754 35899999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.........+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+
T Consensus 158 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 210 (263)
T cd05052 158 ---------------------------TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 210 (263)
T ss_pred ---------------------------eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 0000112234678999999998899999999999999999998 999999988
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
..+.+..+..... +..+..++.++.+||.+||+.||.+||++.++.+.|+
T Consensus 211 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~ 260 (263)
T cd05052 211 LSQVYELLEKGYR--MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFE 260 (263)
T ss_pred HHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 8888777765321 2344678999999999999999999999766665554
No 208
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.2e-39 Score=346.32 Aligned_cols=249 Identities=32% Similarity=0.564 Sum_probs=202.6
Q ss_pred CCeEEEEEe--ccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeecccceE
Q 001057 758 EDFEIIKPI--SQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILIS-VRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 758 edYevlk~L--G~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILsk-L~HPNIVrL~~~Fqd~~~Ly 834 (1170)
++|++.+.+ |.|+||.||++.++.++..||+|++.+..... .|..+... .+||||+++++.|...+.+|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 456666665 99999999999999999999999987643211 12222222 26999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-cEEEEecCCccccccccC
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-HIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-~VKLsDFGLAk~~~~~~~ 913 (1170)
+||||+++++|.+++.....+++..+..++.||+.||.|||+.||+||||||+||+++.++ .++|+|||++....
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~---- 161 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG---- 161 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC----
Confidence 9999999999999998877899999999999999999999999999999999999999998 99999999987421
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
......|+..|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus 162 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~ 211 (267)
T PHA03390 162 ------------------------------TPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDED 211 (267)
T ss_pred ------------------------------CCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCc
Confidence 01123588999999999998999999999999999999999999986543
Q ss_pred HHHH-HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 994 QQIF-DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 994 ~ei~-qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
..+. ..+..........+..++..+.+||.+||+.||.+|++ .++++|+||||.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~--~~~~~l~h~~~~~ 267 (267)
T PHA03390 212 EELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLT--NYNEIIKHPFLKI 267 (267)
T ss_pred chhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCc--hHHHHhcCCcccC
Confidence 3221 11111111111233578999999999999999999996 2689999999974
No 209
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=4.8e-39 Score=336.95 Aligned_cols=254 Identities=30% Similarity=0.533 Sum_probs=218.2
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||+|.++.+|..||+|.+..... .....+.+.+|+.+++.++||||+++++.+.....+|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 58999999999999999999999999999999876432 22344677899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCc-EEEEecCCccccccccCCC
Q 001057 839 YLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGH-IKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~-VKLsDFGLAk~~~~~~~~d 915 (1170)
|+++++|.+++.... .+++..+..++.||+.||.|||+++|+|+||||+||+++.++. ++|+|||.+....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~------ 153 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN------ 153 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhcc------
Confidence 999999999997643 4799999999999999999999999999999999999998864 6999999886421
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
..........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+
T Consensus 154 ------------------------~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 209 (257)
T cd08225 154 ------------------------DSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ 209 (257)
T ss_pred ------------------------CCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 00011123468999999999988889999999999999999999999999888777
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+...... ..+..++.++.++|.+||..+|.+||+ +.++++||||
T Consensus 210 ~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt---~~~ll~~~~~ 257 (257)
T cd08225 210 LVLKICQGYFA--PISPNFSRDLRSLISQLFKVSPRDRPS---ITSILKRPFL 257 (257)
T ss_pred HHHHHhcccCC--CCCCCCCHHHHHHHHHHhccChhhCcC---HHHHhhCCCC
Confidence 77666654432 334578899999999999999999999 8899999997
No 210
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.6e-39 Score=378.66 Aligned_cols=253 Identities=25% Similarity=0.342 Sum_probs=206.2
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
...|.+.+.||+|+||.||+|++..+++.||||.... ..+.+|+.+|++++|||||++++++...+..|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 4579999999999999999999999999999995322 2356899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+. ++|..++... ..+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||+|+.....
T Consensus 239 ~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~---- 313 (461)
T PHA03211 239 LPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS---- 313 (461)
T ss_pred EEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccc----
Confidence 99994 6999888754 46999999999999999999999999999999999999999999999999999752100
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC---
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT--- 992 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~--- 992 (1170)
.........+||+.|||||++.+..++.++|||||||+||||++|..|+....
T Consensus 314 ------------------------~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~ 369 (461)
T PHA03211 314 ------------------------WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD 369 (461)
T ss_pred ------------------------cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence 00011224679999999999999999999999999999999999887654321
Q ss_pred -----HHHHHHHHhccCCC---CCCC----------------------------CccCCHHHHHHHHHhccCCCCCCCCh
Q 001057 993 -----PQQIFDNIMNRDIP---WPNI----------------------------PEEMSVEACDLIDKLLTENPVQRLGA 1036 (1170)
Q Consensus 993 -----~~ei~qkIl~~~l~---fP~i----------------------------p~~lS~eakDLIkkLLq~DPskRpSa 1036 (1170)
..++.+.|...... ++.. ...++.++.+||.+||+.||.+||+
T Consensus 370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPs- 448 (461)
T PHA03211 370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPS- 448 (461)
T ss_pred ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcC-
Confidence 23333333322211 1100 0135668999999999999999999
Q ss_pred hhHHHHHcCCCCCC
Q 001057 1037 TGAREVKQHPFFKN 1050 (1170)
Q Consensus 1037 ~~AeEILqHPfF~~ 1050 (1170)
+.|+|+||||+.
T Consensus 449 --a~elL~hp~f~~ 460 (461)
T PHA03211 449 --AAELLRLPLFQS 460 (461)
T ss_pred --HHHHhhCcccCC
Confidence 889999999974
No 211
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.2e-40 Score=383.28 Aligned_cols=261 Identities=33% Similarity=0.568 Sum_probs=238.5
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
.......|.+++.||+|.|++|.+|++..|+..||||++.|..... ...+.+.+|+++|..++|||||++|.+......
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-SKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-HHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 3556778999999999999999999999999999999999887544 444568999999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+||||+.+|++++++.++++..+..++.++.|++.|++|||+++|+|||||.+||||+.+..+||+|||++..+.
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--- 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD--- 206 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998641
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCC-CcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGH-GATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
......+.||++.|.|||++.+..| ++.+|+||+|++||-|++|..||.+.
T Consensus 207 ----------------------------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 207 ----------------------------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred ----------------------------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 1234467899999999999999877 67899999999999999999999999
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+..++-...+.+++..| ..++-++.+||+++|..+|.+|++ .++|..|.|....
T Consensus 259 ~lk~Lr~rvl~gk~rIp---~~ms~dce~lLrk~lvl~Pskr~~---~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 259 NLKELRPRVLRGKYRIP---FYMSCDCEDLLRKFLVLNPSKRGP---CDQIMKDRWRNDL 312 (596)
T ss_pred ccccccchheeeeeccc---ceeechhHHHHHHhhccCccccCC---HHHhhhhcccchh
Confidence 99988888888888655 679999999999999999999999 8899999998754
No 212
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.2e-38 Score=329.94 Aligned_cols=257 Identities=36% Similarity=0.595 Sum_probs=219.7
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cceEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENLYLV 836 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~LyLV 836 (1170)
+|++.+.||.|++|.||+|.+..+++.|++|++..... .....+.+.+|+.++++++||||+++++.+... ..+|+|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 58899999999999999999999999999999876543 245677889999999999999999999999988 889999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||+.+++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 155 (260)
T cd06606 80 LEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE---- 155 (260)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc----
Confidence 9999999999999888789999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC-HHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT-PQQ 995 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~-~~e 995 (1170)
.........++..|+|||.+.+..++.++|+||||+++|+|++|..||.... ...
T Consensus 156 ------------------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~ 211 (260)
T cd06606 156 ------------------------TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA 211 (260)
T ss_pred ------------------------ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH
Confidence 0001224568899999999988889999999999999999999999998766 333
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
....+.. ....+.++..++..+.+||.+||+.||.+||+ +.+++.||||
T Consensus 212 ~~~~~~~-~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~---~~~ll~~~~~ 260 (260)
T cd06606 212 ALYKIGS-SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT---ADELLQHPFL 260 (260)
T ss_pred HHHhccc-cCCCcCCCcccCHHHHHHHHHhCcCChhhCCC---HHHHhhCCCC
Confidence 3333322 12334456778999999999999999999998 8899999997
No 213
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.2e-39 Score=347.11 Aligned_cols=261 Identities=30% Similarity=0.508 Sum_probs=211.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+++|++.+.||.|+||+||+|.++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+...+|+|
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 3679999999999999999999999999999998865432 223445678899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCccccccccC
Q 001057 837 MEYLNGGDLYSLLRNLGC--LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~--LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|||++ ++|..++..... +++..++.++.||+.||+|||++||+||||||+||+++. ++.+||+|||++.....
T Consensus 80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~--- 155 (294)
T PLN00009 80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI--- 155 (294)
T ss_pred Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCC---
Confidence 99995 588888865433 578888999999999999999999999999999999985 45799999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.........|++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+
T Consensus 156 ---------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~ 208 (294)
T PLN00009 156 ---------------------------PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDS 208 (294)
T ss_pred ---------------------------CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 00011234678999999998764 57889999999999999999999998877
Q ss_pred HHHHHHHHhccC---------------------CCCCC-----CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCC
Q 001057 993 PQQIFDNIMNRD---------------------IPWPN-----IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHP 1046 (1170)
Q Consensus 993 ~~ei~qkIl~~~---------------------l~fP~-----ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHP 1046 (1170)
..+.+.++.... ..++. ....++.++.++|.+||+.||.+||+ +.+++.||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps---~~~~l~~~ 285 (294)
T PLN00009 209 EIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRIT---ARAALEHE 285 (294)
T ss_pred HHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcC---HHHHhcCc
Confidence 665554443210 00000 11357889999999999999999999 88999999
Q ss_pred CCCCCC
Q 001057 1047 FFKNIN 1052 (1170)
Q Consensus 1047 fF~~id 1052 (1170)
||.+++
T Consensus 286 ~~~~~~ 291 (294)
T PLN00009 286 YFKDLG 291 (294)
T ss_pred hHhHHh
Confidence 998753
No 214
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-39 Score=354.57 Aligned_cols=257 Identities=32% Similarity=0.548 Sum_probs=217.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.++..++||||+++++.|...+..|+||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~ 98 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVM 98 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEE
Confidence 44666788999999999999999999999999886532 334567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||+++++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 99 e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~-------- 169 (292)
T cd06658 99 EFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVS-------- 169 (292)
T ss_pred eCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcc--------
Confidence 99999999998865 468999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
..........|++.|+|||++.+..++.++|+|||||++|||++|..||.+.+....+
T Consensus 170 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~ 227 (292)
T cd06658 170 ----------------------KEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM 227 (292)
T ss_pred ----------------------cccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0001112356899999999998888999999999999999999999999988877666
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..+..............+..+.+||.+||..||.+||+ +.++++||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~il~~~~~~~~ 278 (292)
T cd06658 228 RRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRAT---AQELLQHPFLKLA 278 (292)
T ss_pred HHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcC---HHHHhhChhhhcc
Confidence 65543322211122357889999999999999999999 8899999999864
No 215
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8e-39 Score=345.19 Aligned_cols=257 Identities=26% Similarity=0.430 Sum_probs=216.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeee-----cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARK-----RATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArd-----k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
.-.+|.+.+.||.|+||.||++.+ ..++..||+|.+.... ......+.+|+.++.+++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (288)
T cd05093 3 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79 (288)
T ss_pred chHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 346799999999999999999985 3356679999887542 34566789999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcE
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG-------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHI 897 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~-------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~V 897 (1170)
+.+|+||||+++++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999999999997543 48999999999999999999999999999999999999999999
Q ss_pred EEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHH
Q 001057 898 KLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGII 977 (1170)
Q Consensus 898 KLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVI 977 (1170)
+|+|||+++..... ..........+++.|+|||++.+..++.++|||||||+
T Consensus 160 kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i 211 (288)
T cd05093 160 KIGDFGMSRDVYST----------------------------DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 211 (288)
T ss_pred EeccCCccccccCC----------------------------ceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHH
Confidence 99999998742100 00001122346788999999998889999999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 978 LFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 978 LYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
+|+|++ |.+||.+....+....+..+... ..+..++.++.+||.+||+.||.+||++.++...++.
T Consensus 212 l~~l~t~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~ 278 (288)
T cd05093 212 LWEIFTYGKQPWYQLSNNEVIECITQGRVL--QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQN 278 (288)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 999998 99999998888888888776543 2345688999999999999999999997666555543
No 216
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-39 Score=353.48 Aligned_cols=255 Identities=31% Similarity=0.554 Sum_probs=218.4
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|+....||.|+||.||+|.+..+++.||+|++..... ...+.+.+|+.++..++||||+++++.|...+.+|+||||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 5555689999999999999999999999999865432 2345678899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCC
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAP 919 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~ 919 (1170)
+++++|..++.. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 100 ~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~---------- 168 (297)
T cd06659 100 LQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQIS---------- 168 (297)
T ss_pred CCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcc----------
Confidence 999999998765 568999999999999999999999999999999999999999999999999986421
Q ss_pred CCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 001057 920 SLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDN 999 (1170)
Q Consensus 920 sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qk 999 (1170)
.........+|++.|+|||++.+..++.++|+|||||++|||++|..||...+..+....
T Consensus 169 --------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 228 (297)
T cd06659 169 --------------------KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 228 (297)
T ss_pred --------------------cccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 000112345789999999999988899999999999999999999999998887777666
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+.............++..+.++|.+||+.+|.+||+ +.++++||||...
T Consensus 229 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps---~~~ll~~~~~~~~ 277 (297)
T cd06659 229 LRDSPPPKLKNAHKISPVLRDFLERMLTREPQERAT---AQELLDHPFLLQT 277 (297)
T ss_pred HhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcC---HHHHhhChhhccC
Confidence 655443333334567899999999999999999999 8899999999764
No 217
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.1e-38 Score=335.97 Aligned_cols=255 Identities=29% Similarity=0.504 Sum_probs=214.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|.+..+|+.||+|.++..........+.+.+|+.+++.++|+||++++++|...+.+++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999999999999999987655555556778899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 838 EYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||+++|+|..++... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~--- 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS--- 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccC---
Confidence 999999999998642 4589999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC-
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT- 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~- 992 (1170)
.........|++.|+|||++.+..++.++|+|||||++|+|++|..||....
T Consensus 159 ---------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 211 (267)
T cd08224 159 ---------------------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 211 (267)
T ss_pred ---------------------------CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc
Confidence 0011123468899999999998889999999999999999999999997543
Q ss_pred -HHHHHHHHhccCCCCCCCCc-cCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 -PQQIFDNIMNRDIPWPNIPE-EMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 -~~ei~qkIl~~~l~fP~ip~-~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.....+.+..+.. +..+. .++..+.++|.+||..+|.+||++.++.+.++
T Consensus 212 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~ 263 (267)
T cd08224 212 NLYSLCKKIEKCDY--PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAK 263 (267)
T ss_pred cHHHHHhhhhcCCC--CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHH
Confidence 3344455444332 22333 68889999999999999999999665555543
No 218
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.8e-39 Score=343.37 Aligned_cols=256 Identities=29% Similarity=0.553 Sum_probs=216.4
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecccceEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR---NPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~---HPNIVrL~~~Fqd~~~LyL 835 (1170)
.|++++.||.|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++ ||||++++++|.....+|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 4888999999999999999999999999999987542 2344567888999999987 9999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||||++|++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.....
T Consensus 80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~----- 153 (277)
T cd06917 80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ----- 153 (277)
T ss_pred EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC-----
Confidence 9999999999999876 4799999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.........|+..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+....
T Consensus 154 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~ 208 (277)
T cd06917 154 -------------------------NSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF 208 (277)
T ss_pred -------------------------CccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh
Confidence 0011223468999999999875 45688999999999999999999999887766
Q ss_pred HHHHHHhccCCCCCCCCc-cCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPE-EMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~-~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.....+.... .+.++. .++.++.+||.+||+.||.+||+ +.+++.||||++..
T Consensus 209 ~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~il~~~~~~~~~ 262 (277)
T cd06917 209 RAMMLIPKSK--PPRLEDNGYSKLLREFVAACLDEEPKERLS---AEELLKSKWIKAHS 262 (277)
T ss_pred hhhhccccCC--CCCCCcccCCHHHHHHHHHHcCCCcccCcC---HHHHhhChHhhccc
Confidence 5554443332 223333 37889999999999999999999 88999999998764
No 219
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.4e-38 Score=331.54 Aligned_cols=254 Identities=32% Similarity=0.624 Sum_probs=221.3
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|++++.+++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 58999999999999999999999999999999987643 23456789999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+.+++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~-------- 151 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLND-------- 151 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCC--------
Confidence 999999999998888899999999999999999999999999999999999999999999999999875310
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
.........|+..|+|||.+.+..++.++||||||+++|+|++|..||...+......
T Consensus 152 ----------------------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~ 209 (254)
T cd06627 152 ----------------------VSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALF 209 (254)
T ss_pred ----------------------CcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence 0001233568899999999988888999999999999999999999998777655554
Q ss_pred HHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 999 NIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 999 kIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.+.... .+..+..++..+.++|.+||..+|++||+ +.+++.||||
T Consensus 210 ~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~~---~~~~l~~~~~ 254 (254)
T cd06627 210 RIVQDD--HPPLPEGISPELKDFLMQCFQKDPNLRPT---AKQLLKHPWI 254 (254)
T ss_pred HHhccC--CCCCCCCCCHHHHHHHHHHHhCChhhCcC---HHHHhcCCCC
Confidence 444322 23455778999999999999999999999 8899999998
No 220
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.8e-39 Score=347.31 Aligned_cols=257 Identities=31% Similarity=0.521 Sum_probs=212.0
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cceE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENLY 834 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~Ly 834 (1170)
.++|++.+.||.|+||.||+|.++.+++.||+|.++..... ......+.+|+.++..++||||+++++++... ..+|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 46799999999999999999999999999999998755332 23334567899999999999999999998877 8899
Q ss_pred EEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 835 LVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 83 lv~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~-- 159 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP-- 159 (293)
T ss_pred EEehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC--
Confidence 9999996 59999987654 5999999999999999999999999999999999999999999999999998753100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-CCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-HGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
........+++.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+
T Consensus 160 ----------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~ 211 (293)
T cd07843 160 ----------------------------LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS 211 (293)
T ss_pred ----------------------------ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 01112345788999999987644 6889999999999999999999999887
Q ss_pred HHHHHHHHhccCC-------------------CC---------CCCCcc-CCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 PQQIFDNIMNRDI-------------------PW---------PNIPEE-MSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 ~~ei~qkIl~~~l-------------------~f---------P~ip~~-lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
....+..+...-. .+ ..++.. ++..+.+||.+||+.||.+||+ +.|++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t---~~ell 288 (293)
T cd07843 212 EIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRIS---AEDAL 288 (293)
T ss_pred hHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCC---HHHHh
Confidence 7666555432100 00 011122 5888999999999999999999 88999
Q ss_pred cCCCC
Q 001057 1044 QHPFF 1048 (1170)
Q Consensus 1044 qHPfF 1048 (1170)
.||||
T Consensus 289 ~~~~f 293 (293)
T cd07843 289 KHPYF 293 (293)
T ss_pred cCCCC
Confidence 99998
No 221
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-38 Score=342.18 Aligned_cols=256 Identities=23% Similarity=0.395 Sum_probs=212.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeec----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKR----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
...+|++.+.||+|+||+||+|... .++..||+|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4578999999999999999999853 456799999987532 2344567889999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL-----------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~-----------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 999999999999999998532 237888899999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
+.+||+|||+++..... ..........++..|+|||++.+..++.++|||||
T Consensus 161 ~~~kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 212 (283)
T cd05090 161 LHVKISDLGLSREIYSA----------------------------DYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSF 212 (283)
T ss_pred CcEEeccccccccccCC----------------------------cceecccCCCccceecChHHhccCCCCchhhhHHH
Confidence 99999999999752100 00011223446778999999998889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 975 GIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 975 GVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
||++|||++ |.+||.+.+...+.+.+..... +..+..++..+.++|.+||+.||.+||++.++.+.+
T Consensus 213 G~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l 280 (283)
T cd05090 213 GVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQL--LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRL 280 (283)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHh
Confidence 999999998 9999998888777777665443 234567899999999999999999999955444433
No 222
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.5e-39 Score=400.10 Aligned_cols=263 Identities=30% Similarity=0.528 Sum_probs=216.7
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-- 830 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-- 830 (1170)
....+++|++++.||.|+||+||+|++..++..||+|++..... .......+..|+.+|..++|||||+++++|.+.
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 34566899999999999999999999999999999999876543 334567788999999999999999999988653
Q ss_pred cceEEEEeeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC-------CeeeccCCCCcEEeCC------
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSL-------NVIHRDLKPDNLLIGQ------ 893 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~-------GIIHRDIKPENILLd~------ 893 (1170)
..+||||||+.+|+|..+|... +.+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 5699999999999999999752 5799999999999999999999985 4999999999999964
Q ss_pred -----------CCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc
Q 001057 894 -----------DGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG 962 (1170)
Q Consensus 894 -----------dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g 962 (1170)
.+.+||+|||++..... .......+||+.|+|||++.+
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~-------------------------------~s~~~s~vGTp~YmAPEvL~g 215 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGI-------------------------------ESMAHSCVGTPYYWSPELLLH 215 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccc-------------------------------cccccccCCCccccCHHHHhc
Confidence 23589999999874210 011234579999999999965
Q ss_pred --CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHH
Q 001057 963 --MGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAR 1040 (1170)
Q Consensus 963 --~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~Ae 1040 (1170)
..++.++||||||||||+|++|..||...+....+..++.....++ ....+.++.+||..||+.+|.+||+ +.
T Consensus 216 e~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL~dLI~~~L~~dPeeRPS---a~ 290 (1021)
T PTZ00266 216 ETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKELNILIKNLLNLSAKERPS---AL 290 (1021)
T ss_pred cCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHHHHHHHHHhcCChhHCcC---HH
Confidence 3488999999999999999999999986654443333333333322 1357899999999999999999999 88
Q ss_pred HHHcCCCCCCCC
Q 001057 1041 EVKQHPFFKNIN 1052 (1170)
Q Consensus 1041 EILqHPfF~~id 1052 (1170)
++|.||||..+.
T Consensus 291 QlL~h~~ik~i~ 302 (1021)
T PTZ00266 291 QCLGYQIIKNVG 302 (1021)
T ss_pred HHhccHHHhhcC
Confidence 999999998764
No 223
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.1e-39 Score=341.85 Aligned_cols=251 Identities=31% Similarity=0.505 Sum_probs=205.1
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecc--cceEEE
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCR--ENLYLV 836 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~--~~LyLV 836 (1170)
|++++.||.|+||.||+|.+..+++.||+|++.+... .. ......+|+.++.++. ||||+++++++.+. +.+|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 7889999999999999999999999999999876422 11 2223457888888885 99999999999987 889999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+. |+|.+.+... ..+++..++.++.||+.||.|||++||+||||||+||+++. +.+||+|||+++....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~----- 151 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS----- 151 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccccccc-----
Confidence 99996 5888888754 57899999999999999999999999999999999999999 9999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
........+++.|+|||++.. ..++.++|||||||++|||++|.+||.+.+..
T Consensus 152 --------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~ 205 (282)
T cd07831 152 --------------------------KPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL 205 (282)
T ss_pred --------------------------CCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH
Confidence 001112457899999998764 45688999999999999999999999988776
Q ss_pred HHHHHHhcc------------------CCCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNR------------------DIPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~------------------~l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
+.+..+... ...++. ....++.++.+||.+||.+||.+||+ +.++++||||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~---~~~~l~~~~~ 282 (282)
T cd07831 206 DQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT---AKQALRHPYF 282 (282)
T ss_pred HHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC---HHHHhhCCCC
Confidence 655544321 111111 11256899999999999999999999 8899999998
No 224
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.6e-38 Score=337.48 Aligned_cols=259 Identities=29% Similarity=0.499 Sum_probs=217.9
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc--cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cce
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD--MIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENL 833 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~--i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~L 833 (1170)
.+|++.+.||+|+||.||+|++..+++.||+|.+.... .........+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57999999999999999999999999999999875421 12334567888999999999999999999988764 458
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
++||||+++++|.+++...+.+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.....
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-- 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI-- 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc--
Confidence 999999999999999988778999999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
...........|+..|+|||++.+..++.++|+|||||++|+|++|.+||.....
T Consensus 160 -------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 214 (264)
T cd06653 160 -------------------------CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA 214 (264)
T ss_pred -------------------------cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH
Confidence 0000111235689999999999988899999999999999999999999988776
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
......+..... .+.++..++..+.++|.+||. +|..||+ +.+++.|||.
T Consensus 215 ~~~~~~~~~~~~-~~~~p~~~~~~~~~~i~~~l~-~~~~r~~---~~~~~~~~~~ 264 (264)
T cd06653 215 MAAIFKIATQPT-KPMLPDGVSDACRDFLKQIFV-EEKRRPT---AEFLLRHPFV 264 (264)
T ss_pred HHHHHHHHcCCC-CCCCCcccCHHHHHHHHHHhc-CcccCcc---HHHHhcCCCC
Confidence 665555543322 234567899999999999999 6799999 7799999984
No 225
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.9e-38 Score=327.18 Aligned_cols=252 Identities=38% Similarity=0.625 Sum_probs=215.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|++|.||++.+..+++.|++|++..... .....+.+|+.++..++||||+++++.|......|++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 58999999999999999999998999999999876532 355788899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|++|++|.+++... ..+++..+..++.|++.||.|||++|++||||+|+||+++.++.++|+|||++....
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~-------- 149 (253)
T cd05122 78 FCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLS-------- 149 (253)
T ss_pred cCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccc--------
Confidence 99999999999876 579999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
. ........|+..|+|||++.+..++.++|+||||+++|+|++|..||...+.....
T Consensus 150 ----------------------~-~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 206 (253)
T cd05122 150 ----------------------D-TKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL 206 (253)
T ss_pred ----------------------c-cccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH
Confidence 0 00023456889999999999888899999999999999999999999887655554
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
..+.....+....+..++..+.++|.+||+.||.+||+ +.++++|||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t---~~~~l~~~~ 253 (253)
T cd05122 207 FKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT---AEQLLKHPF 253 (253)
T ss_pred HHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCC---HHHHhcCCC
Confidence 44443222111111234899999999999999999999 889999998
No 226
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.2e-39 Score=340.55 Aligned_cols=254 Identities=29% Similarity=0.494 Sum_probs=213.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
++|++.+.||.|+||.||+|+++.+++.||||.+.+...........+.+|+.+++.++||||++++++|...+.+|+||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57999999999999999999999999999999987765555556678899999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 838 EYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 838 EY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||++|++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~--- 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--- 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc---
Confidence 99999999999864 34589999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.........|++.|+|||++.+..++.++|+||||+++|+|++|..||.+...
T Consensus 159 ---------------------------~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 211 (267)
T cd08229 159 ---------------------------KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 211 (267)
T ss_pred ---------------------------CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 00111235689999999999988899999999999999999999999976543
Q ss_pred --HHHHHHHhccCCCCCCC-CccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 994 --QQIFDNIMNRDIPWPNI-PEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 994 --~ei~qkIl~~~l~fP~i-p~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
......+.... ++.. +..++..+++||.+||..||.+||++..+-+++
T Consensus 212 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~ 262 (267)
T cd08229 212 NLYSLCKKIEQCD--YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVA 262 (267)
T ss_pred hHHHHhhhhhcCC--CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHH
Confidence 34444444322 2222 246889999999999999999999965554444
No 227
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.8e-40 Score=349.92 Aligned_cols=256 Identities=30% Similarity=0.547 Sum_probs=218.8
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|+.++.||.|+||.||+|.+..++..||+|++.... .....+.+.+|+.+++.++||||++++++|.....+|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 4777889999999999999999999999999987543 23345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+++++|.+++.. +.+++..++.++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~-------- 153 (277)
T cd06642 83 YLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD-------- 153 (277)
T ss_pred ccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccC--------
Confidence 9999999998865 5689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
.........|+..|+|||++.+..++.++|+|||||++|||++|..||..........
T Consensus 154 ----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 211 (277)
T cd06642 154 ----------------------TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF 211 (277)
T ss_pred ----------------------cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence 0011123468899999999998889999999999999999999999998776666555
Q ss_pred HHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 999 NIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 999 kIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.+.... .+..+..++.++.+||.+||+.+|.+||+ +.++++||||....
T Consensus 212 ~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~~ 260 (277)
T cd06642 212 LIPKNS--PPTLEGQYSKPFKEFVEACLNKDPRFRPT---AKELLKHKFITRYT 260 (277)
T ss_pred hhhcCC--CCCCCcccCHHHHHHHHHHccCCcccCcC---HHHHHHhHHHHHHh
Confidence 544332 22344568889999999999999999999 88999999997654
No 228
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=8.9e-39 Score=344.47 Aligned_cols=262 Identities=31% Similarity=0.472 Sum_probs=206.8
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc----
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE---- 831 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~---- 831 (1170)
.+++|++++.||.|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 45689999999999999999999999999999998865422 2222345678999999999999999999876654
Q ss_pred ----ceEEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcc
Q 001057 832 ----NLYLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSK 906 (1170)
Q Consensus 832 ----~LyLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk 906 (1170)
..|+||||+. ++|..++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 4599999995 58888887643 68999999999999999999999999999999999999999999999999987
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-CCcchhhhHHHHHHHHHHhCC
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-HGATADWWSVGIILFELLIGI 985 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLTG~ 985 (1170)
....... ..........++..|+|||++.+.. ++.++||||||+++|+|++|.
T Consensus 168 ~~~~~~~--------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~ 221 (310)
T cd07865 168 AFSLSKN--------------------------SKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRS 221 (310)
T ss_pred cccCCcc--------------------------cCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCC
Confidence 5310000 0001112346789999999987643 688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHhc--cCC-----------------CCCCC----------CccCCHHHHHHHHHhccCCCCCCCCh
Q 001057 986 PPFNAKTPQQIFDNIMN--RDI-----------------PWPNI----------PEEMSVEACDLIDKLLTENPVQRLGA 1036 (1170)
Q Consensus 986 pPF~g~~~~ei~qkIl~--~~l-----------------~fP~i----------p~~lS~eakDLIkkLLq~DPskRpSa 1036 (1170)
+||.+.+.......+.. +.. .++.. +...+..+.+||.+||+.||.+||+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t- 300 (310)
T cd07865 222 PIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRID- 300 (310)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccC-
Confidence 99988776544333222 100 01100 0123567889999999999999999
Q ss_pred hhHHHHHcCCCC
Q 001057 1037 TGAREVKQHPFF 1048 (1170)
Q Consensus 1037 ~~AeEILqHPfF 1048 (1170)
+.++++||||
T Consensus 301 --~~e~l~h~~f 310 (310)
T cd07865 301 --ADTALNHDFF 310 (310)
T ss_pred --HHHHhcCCCC
Confidence 8899999998
No 229
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=8.6e-39 Score=342.51 Aligned_cols=255 Identities=31% Similarity=0.560 Sum_probs=219.9
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
-|++++.||.|+||.||+|.+..+++.||||++..... ......+.+|+.++..++||||++++++|.....+|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 37889999999999999999999999999998765432 2345678899999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+.+++|..++.. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~-------- 153 (277)
T cd06641 83 YLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD-------- 153 (277)
T ss_pred eCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceeccc--------
Confidence 9999999999875 4689999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
.........|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+......
T Consensus 154 ----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~ 211 (277)
T cd06641 154 ----------------------TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLF 211 (277)
T ss_pred ----------------------chhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHH
Confidence 0001123468899999999988888999999999999999999999998877776666
Q ss_pred HHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 999 NIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 999 kIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.+..... +.++..++.++.++|.+||+.+|.+||+ +.++++||||...
T Consensus 212 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp~---~~~~l~~~~~~~~ 259 (277)
T cd06641 212 LIPKNNP--PTLEGNYSKPLKEFVEACLNKEPSFRPT---AKELLKHKFIVRF 259 (277)
T ss_pred HHhcCCC--CCCCcccCHHHHHHHHHHccCChhhCcC---HHHHHhCHHHhhh
Confidence 6654332 3345678999999999999999999999 8899999999764
No 230
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.4e-39 Score=363.66 Aligned_cols=258 Identities=24% Similarity=0.345 Sum_probs=206.8
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeee-----cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARK-----RATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFT 828 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArd-----k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fq 828 (1170)
+..++|++.+.||+|+||+||+|++ ..++..||+|+++... .....+.+.+|+.+|..+ +|||||+++++|.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 4456899999999999999999974 3567799999986543 223456788999999999 8999999999999
Q ss_pred cccceEEEEeeccCCChHHHHHhcC-------------------------------------------------------
Q 001057 829 CRENLYLVMEYLNGGDLYSLLRNLG------------------------------------------------------- 853 (1170)
Q Consensus 829 d~~~LyLVMEY~~GGSL~dlLk~~~------------------------------------------------------- 853 (1170)
.....|+|||||+||+|.+++....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999986421
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 854 --------------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 854 --------------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 268 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS- 268 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc-
Confidence 36788889999999999999999999999999999999999999999999987521000
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.........++..|+|||++.+..++.++|||||||++|||++ |.+||.+..
T Consensus 269 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~ 321 (375)
T cd05104 269 ---------------------------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMP 321 (375)
T ss_pred ---------------------------cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence 0001112345678999999999999999999999999999997 999998765
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
....+..+...... +..+...+.++.+||.+||+.||.+||++.++.+.|
T Consensus 322 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l 371 (375)
T cd05104 322 VDSKFYKMIKEGYR-MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLI 371 (375)
T ss_pred chHHHHHHHHhCcc-CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 44333333333222 123356788999999999999999999955554444
No 231
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-38 Score=338.14 Aligned_cols=256 Identities=22% Similarity=0.328 Sum_probs=212.5
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRAT-----GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC 829 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~T-----Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd 829 (1170)
+..++|++.+.||.|+||.||+|.++.. +..||+|.+.... .......+.+|+.+|..++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 3456899999999999999999988643 4889999986543 23345678899999999999999999999999
Q ss_pred ccceEEEEeeccCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEE
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNL----------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKL 899 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~----------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKL 899 (1170)
...+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 99999999999999999999653 23677889999999999999999999999999999999999999999
Q ss_pred EecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHH
Q 001057 900 TDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILF 979 (1170)
Q Consensus 900 sDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 979 (1170)
+|||+++..... ..........+|..|+|||++.+..++.++|||||||++|
T Consensus 161 ~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 212 (277)
T cd05032 161 GDFGMTRDIYET----------------------------DYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLW 212 (277)
T ss_pred CCcccchhhccC----------------------------cccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHH
Confidence 999998743100 0001112345678999999998888999999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 980 ELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 980 ELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
||++ |.+||.+.+..+..+.+..... +..+..++.++.+||.+||+.+|.+||++.++.+.
T Consensus 213 el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 274 (277)
T cd05032 213 EMATLAEQPYQGLSNEEVLKFVIDGGH--LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSS 274 (277)
T ss_pred HhhccCCCCCccCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 9998 9999999888888777764432 23456789999999999999999999995444433
No 232
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.3e-38 Score=340.44 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=209.8
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeec-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKR-----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk-----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
..++|++.+.||+|+||.||+|.++ .++..||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4568999999999999999999864 245789999886532 223445688999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEE
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG----------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~----------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLs 900 (1170)
...|+||||+++|+|.+++.... .++...+..++.|++.||.|||++|++||||||+|||++.++.++|+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC
Confidence 99999999999999999997532 25677888899999999999999999999999999999999999999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 980 (1170)
|||+++...... .........+++.|||||++.+..++.++|||||||++||
T Consensus 162 dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 213 (277)
T cd05062 162 DFGMTRDIYETD----------------------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 213 (277)
T ss_pred CCCCccccCCcc----------------------------eeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHH
Confidence 999987421000 0001112346788999999998889999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 981 LLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 981 LLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
|++ |..||.+.+.......+...... ..+..++..+.+||.+||+.||.+||+ +.++++
T Consensus 214 l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps---~~e~l~ 273 (277)
T cd05062 214 IATLAEQPYQGMSNEQVLRFVMEGGLL--DKPDNCPDMLFELMRMCWQYNPKMRPS---FLEIIS 273 (277)
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcC---HHHHHH
Confidence 998 79999998888887777665432 344678899999999999999999999 445443
No 233
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.5e-39 Score=346.39 Aligned_cols=256 Identities=28% Similarity=0.491 Sum_probs=204.4
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|.+++.||.|+||.||+|.+..+|..||||++..... ......+.+|+.+++.++|+||+++++++......|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3679999999999999999999999999999999865432 22234567899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+. ++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~----- 155 (291)
T cd07870 82 FEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSI----- 155 (291)
T ss_pred Eeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCC-----
Confidence 99995 678777654 35688899999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCH-
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTP- 993 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~- 993 (1170)
.........+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+.
T Consensus 156 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~ 210 (291)
T cd07870 156 -------------------------PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV 210 (291)
T ss_pred -------------------------CCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH
Confidence 00011234578999999998764 578899999999999999999999986543
Q ss_pred HHHHHHHhcc-CCC------------------CCCC----------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 994 QQIFDNIMNR-DIP------------------WPNI----------PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 994 ~ei~qkIl~~-~l~------------------fP~i----------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+.+..+... ..+ ++.. ....+..+.+||.+||+.||.+||+ +.+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t---~~~~l~ 287 (291)
T cd07870 211 FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS---AQDALL 287 (291)
T ss_pred HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC---HHHHhc
Confidence 2222222110 000 0000 0123678999999999999999999 889999
Q ss_pred CCCC
Q 001057 1045 HPFF 1048 (1170)
Q Consensus 1045 HPfF 1048 (1170)
||||
T Consensus 288 h~~~ 291 (291)
T cd07870 288 HPYF 291 (291)
T ss_pred CCCC
Confidence 9998
No 234
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.9e-39 Score=346.92 Aligned_cols=259 Identities=29% Similarity=0.502 Sum_probs=206.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cceE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRA--TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENLY 834 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~--TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~Ly 834 (1170)
+|++++.||.|+||.||+|.+.. ++..||||.+.............+.+|+.++..++||||++++++|.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48999999999999999999988 8999999998874322233446678899999999999999999999988 7899
Q ss_pred EEEeeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC----CCcEEEEecCCc
Q 001057 835 LVMEYLNGGDLYSLLRNL-----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ----DGHIKLTDFGLS 905 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~-----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~----dG~VKLsDFGLA 905 (1170)
+||||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999996 4787777532 26899999999999999999999999999999999999999 899999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG 984 (1170)
....... .........++|+.|+|||++.+. .++.++|||||||++|+|++|
T Consensus 160 ~~~~~~~---------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~ 212 (316)
T cd07842 160 RLFNAPL---------------------------KPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTL 212 (316)
T ss_pred cccCCCc---------------------------ccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhc
Confidence 7531000 000112345789999999998764 578999999999999999999
Q ss_pred CCCCCCCCHHH---------HHHHHhc--------------------------cCCCCCC------C--CccCCHHHHHH
Q 001057 985 IPPFNAKTPQQ---------IFDNIMN--------------------------RDIPWPN------I--PEEMSVEACDL 1021 (1170)
Q Consensus 985 ~pPF~g~~~~e---------i~qkIl~--------------------------~~l~fP~------i--p~~lS~eakDL 1021 (1170)
.+||.+..... .+..+.. ....++. . ....+.++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 213 EPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred CCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 99998654321 1111100 0001110 0 01567789999
Q ss_pred HHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 1022 IDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 1022 IkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
|.+||+.||.+||+ +.++++||||
T Consensus 293 i~~~l~~~P~~Rps---~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYDPTKRIT---AEEALEHPYF 316 (316)
T ss_pred HHHHhcCCcccCcC---HHHHhcCCCC
Confidence 99999999999999 8899999998
No 235
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=377.02 Aligned_cols=257 Identities=35% Similarity=0.619 Sum_probs=225.7
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
++||.|.||+||-|+++.+|+.||||++.|.....+ +...+.+|+.||.+++||.||.|-..|+..+.+++|||-+. |
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 579999999999999999999999999998776544 45889999999999999999999999999999999999995 4
Q ss_pred ChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC---cEEEEecCCccccccccCCCCCC
Q 001057 844 DLYSLLR--NLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG---HIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 844 SL~dlLk--~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG---~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+.+.|- ..++|++...++++.||+.||.|||-+||+|.|||||||||.... ++||||||+|++..
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg--------- 718 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG--------- 718 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc---------
Confidence 7766663 457899999999999999999999999999999999999997543 79999999999742
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
......+.+|||.|+|||++.+++|+.+-|+||+|||+|--|+|..||..+ +++-+
T Consensus 719 ----------------------EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd--EdInd 774 (888)
T KOG4236|consen 719 ----------------------EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED--EDIND 774 (888)
T ss_pred ----------------------hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc--cchhH
Confidence 122346789999999999999999999999999999999999999999753 45667
Q ss_pred HHhccCCCCCCCC-ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC-hhhhhh
Q 001057 999 NIMNRDIPWPNIP-EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN-WDTLAR 1058 (1170)
Q Consensus 999 kIl~~~l~fP~ip-~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id-we~L~~ 1058 (1170)
+|.+..+-+|.-| ..+++++.|||..+|+..-.+|.+ ++..|.|||+++.. |-.|+.
T Consensus 775 QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRys---vdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 775 QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYS---VDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcc---hHhhccchhhhcchHHHHHHH
Confidence 7888887777655 479999999999999999999999 88899999999874 665554
No 236
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9.2e-39 Score=348.74 Aligned_cols=254 Identities=26% Similarity=0.387 Sum_probs=209.5
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCE--EEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDL--FAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCR 830 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~--VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~ 830 (1170)
.+..++|++.+.||+|+||.||+|.++.++.. +|+|.+... ........+.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~ 80 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR 80 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC
Confidence 35567899999999999999999999877764 466665432 2344556788999999999 899999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
+.+|+||||+++|+|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 99999999999999999997542 47899999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
+.+||+|||++.... .........++..|+|||++.+..++.++|||||
T Consensus 161 ~~~kl~dfg~~~~~~-------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 209 (303)
T cd05088 161 YVAKIADFGLSRGQE-------------------------------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 209 (303)
T ss_pred CcEEeCccccCcccc-------------------------------hhhhcccCCCcccccCHHHHhccCCcccccchhh
Confidence 999999999986310 0000111234667999999988889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 975 GIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 975 GVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
||++|||++ |.+||.+.+..+.+..+.... . +..+..++.++.+||.+||+.+|.+||+ +.+++.+
T Consensus 210 G~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~ 276 (303)
T cd05088 210 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-R-LEKPLNCDDEVYDLMRQCWREKPYERPS---FAQILVS 276 (303)
T ss_pred hhHHHHHHhcCCCCcccCChHHHHHHHhcCC-c-CCCCCCCCHHHHHHHHHHcCCChhhCcC---HHHHHHH
Confidence 999999998 999999888877777665432 1 1233567899999999999999999999 5555554
No 237
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-38 Score=335.63 Aligned_cols=247 Identities=25% Similarity=0.425 Sum_probs=208.4
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.++|++++.||+|+||.||++..+ .+..+|+|.+..... ....+.+|+.+|+.++||||++++++|.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 77 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence 467999999999999999999875 456799998765432 235678899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~----- 152 (256)
T cd05114 78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLD----- 152 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCC-----
Confidence 9999999999999753 5689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ 994 (1170)
..........++..|+|||++.+..++.++|||||||++|+|++ |.+||...+..
T Consensus 153 ------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~ 208 (256)
T cd05114 153 ------------------------DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY 208 (256)
T ss_pred ------------------------CceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 00001112345678999999998889999999999999999999 99999998888
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
+.+..+..+... ..+...+..+.+||.+||+.||.+||++.++
T Consensus 209 ~~~~~i~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l 251 (256)
T cd05114 209 EVVEMISRGFRL--YRPKLASMTVYEVMYSCWHEKPEGRPTFAEL 251 (256)
T ss_pred HHHHHHHCCCCC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 888888765432 2235678899999999999999999995444
No 238
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.5e-38 Score=341.13 Aligned_cols=257 Identities=31% Similarity=0.517 Sum_probs=212.7
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cceEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENLYL 835 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~LyL 835 (1170)
++|+.++.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+++++.++||||++++++|.+. ..+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 469999999999999999999999999999999875432 24456788999999999999999999988654 46899
Q ss_pred EEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 836 VMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
||||++|++|.+++.. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~- 157 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN- 157 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc-
Confidence 9999999999988753 34589999999999999999999999999999999999999999999999999864210
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.......++..|+|||.+.+..++.++|||||||++|+|++|..||...
T Consensus 158 -------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 158 -------------------------------SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred -------------------------------cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 0011245788999999999888999999999999999999999999865
Q ss_pred -----CHHHHHHHHhccCCC-CCCCC---ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 992 -----TPQQIFDNIMNRDIP-WPNIP---EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 992 -----~~~ei~qkIl~~~l~-fP~ip---~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...+....+...... .+..+ ...++.+.+||.+||..||.+||+ +.|++.||||...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~eil~~~~~~~~ 272 (287)
T cd06621 207 GEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPT---PWDMLEHPWIKAQ 272 (287)
T ss_pred cCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCC---HHHHHhCcccccc
Confidence 234444444432211 11111 235678999999999999999999 8899999999765
No 239
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=5.9e-39 Score=344.34 Aligned_cols=263 Identities=26% Similarity=0.463 Sum_probs=211.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyL 835 (1170)
.++|...+.||.|+||.||++.+..+++.||+|.+.+... ......+.+|+.++.++. ||||+++++++......++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3567788899999999999999999999999999876432 244567889999999996 9999999999999999999
Q ss_pred EEeeccCCChHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 836 VMEYLNGGDLYSLLR-----NLGCLDEDMARVYIAELVLALEYLHSL-NVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk-----~~~~LSEe~ar~IaaQIL~ALeYLHs~-GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
+|||+. ++|.++.. ....+++..+..++.|++.||+|||+. ||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 999985 45554432 235699999999999999999999974 99999999999999999999999999987421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC---CCCcchhhhHHHHHHHHHHhCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM---GHGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~---~ys~ksDIWSLGVILYELLTG~p 986 (1170)
. ........||+.|+|||++.+. .++.++|||||||++|+|++|.+
T Consensus 160 ~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 208 (288)
T cd06616 160 D-------------------------------SIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKF 208 (288)
T ss_pred c-------------------------------CCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCC
Confidence 0 0011233688999999999876 68899999999999999999999
Q ss_pred CCCCCCH-HHHHHHHhccCCC-CC-CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhh
Q 001057 987 PFNAKTP-QQIFDNIMNRDIP-WP-NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTL 1056 (1170)
Q Consensus 987 PF~g~~~-~ei~qkIl~~~l~-fP-~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L 1056 (1170)
||..... .+....+.....+ .+ ..+..++.++.+||.+||+.||.+||+ +.+++.||||+...|.+.
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt---~~~i~~~~~~~~~~~~~~ 278 (288)
T cd06616 209 PYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPK---YKELLEHPFIKDYEERNV 278 (288)
T ss_pred CchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcC---HHHHhcChhhhchhhcch
Confidence 9976542 2222333322211 11 112357899999999999999999999 889999999998766544
No 240
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.5e-39 Score=355.34 Aligned_cols=260 Identities=31% Similarity=0.523 Sum_probs=208.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----cc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-----EN 832 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-----~~ 832 (1170)
++|++.+.||.|+||.||+|++..+|+.||||++.... .......+.+|+.++..++||||+++++++... ..
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 67999999999999999999999999999999986422 233456678899999999999999999876544 35
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+||||+. ++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 83 ~~lv~e~~~-~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 83 VYIVQELME-TDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred EEEEehhcc-cCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 899999995 588888764 569999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 161 ---------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~ 213 (336)
T cd07849 161 ---------------------------DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK 213 (336)
T ss_pred ---------------------------cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 00011224578999999999765 46889999999999999999999999876
Q ss_pred CHHHHHHHHhc---------------cC-------C------CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 992 TPQQIFDNIMN---------------RD-------I------PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 992 ~~~ei~qkIl~---------------~~-------l------~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
+.......+.. .. . ++.......+.++.+||.+||+.||.+||+ +.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt---~~e~l 290 (336)
T cd07849 214 DYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRIT---VEEAL 290 (336)
T ss_pred CHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcC---HHHHh
Confidence 54433322211 00 0 000011246788999999999999999999 88999
Q ss_pred cCCCCCCC
Q 001057 1044 QHPFFKNI 1051 (1170)
Q Consensus 1044 qHPfF~~i 1051 (1170)
+||||+..
T Consensus 291 ~hp~~~~~ 298 (336)
T cd07849 291 AHPYLEQY 298 (336)
T ss_pred cCcccccc
Confidence 99999865
No 241
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.9e-38 Score=335.14 Aligned_cols=254 Identities=24% Similarity=0.395 Sum_probs=212.8
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
+..++|+++++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.++||||+++++.+.+...+|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 34578999999999999999999865 56679999876532 23567889999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+||||+++|+|.+++... ..++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~- 156 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN- 156 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCC-
Confidence 999999999999999753 46888999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
.........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 157 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 208 (261)
T cd05072 157 ----------------------------EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM 208 (261)
T ss_pred ----------------------------ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC
Confidence 0001112345678999999998889999999999999999998 99999988
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+.......+.... .++ ....++.++.+||.+||..+|.+||++..+.++|+
T Consensus 209 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 209 SNSDVMSALQRGY-RMP-RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred CHHHHHHHHHcCC-CCC-CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 8877777766442 333 23568899999999999999999999776666654
No 242
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-38 Score=342.66 Aligned_cols=262 Identities=35% Similarity=0.589 Sum_probs=224.4
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..+.|++.+.||.|+||.||+|.+..++..||+|++..... ....+.+|+.++..++|+||+++++.|.....+|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 34569999999999999999999998999999999876432 45678899999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||++|++|.+++.... .++...+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~----- 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT----- 167 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhc-----
Confidence 999999999999998876 89999999999999999999999999999999999999999999999999876421
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
..........|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..
T Consensus 168 -------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~ 222 (286)
T cd06614 168 -------------------------KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL 222 (286)
T ss_pred -------------------------cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0000112345788999999999888999999999999999999999999988776
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChh
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWD 1054 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe 1054 (1170)
.....+..........+..++..+.+||.+||+.+|.+||+ +.+++.||||....|.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt---~~~il~~~~~~~~~~~ 279 (286)
T cd06614 223 RALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPS---AEELLQHPFLKKACPK 279 (286)
T ss_pred HHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcC---HHHHhhChHhhccCch
Confidence 66666554433222222347899999999999999999999 8899999999986554
No 243
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=5.6e-39 Score=355.95 Aligned_cols=259 Identities=30% Similarity=0.456 Sum_probs=212.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----cc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-----EN 832 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-----~~ 832 (1170)
++|.+++.||+|+||+||+|++..+++.||||.+..... .......+.+|+.++..++||||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 579999999999999999999999999999999875422 233445677899999999999999999887654 35
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+||||||+. ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~-- 160 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE-- 160 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC--
Confidence 899999995 79999998888899999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
.........||..|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 161 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 212 (337)
T cd07858 161 ----------------------------KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK 212 (337)
T ss_pred ----------------------------CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence 0011223467899999999875 46889999999999999999999999877
Q ss_pred CHHHHHHHHhcc----------------------------CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 992 TPQQIFDNIMNR----------------------------DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 992 ~~~ei~qkIl~~----------------------------~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
+....+..+... ...+......+++++.+||.+||+.||.+||+ +.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps---~~ell 289 (337)
T cd07858 213 DYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRIT---VEEAL 289 (337)
T ss_pred ChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccC---HHHHH
Confidence 654433322210 00001112367899999999999999999999 88999
Q ss_pred cCCCCCCC
Q 001057 1044 QHPFFKNI 1051 (1170)
Q Consensus 1044 qHPfF~~i 1051 (1170)
+||||..+
T Consensus 290 ~h~~~~~~ 297 (337)
T cd07858 290 AHPYLASL 297 (337)
T ss_pred cCcchhhh
Confidence 99999865
No 244
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2e-38 Score=331.40 Aligned_cols=252 Identities=28% Similarity=0.491 Sum_probs=220.8
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+|++.+.||.|+||.||+++++.+++.||+|.+...... ......+.+|+.+++.++||||+++++++.+...+|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 589999999999999999999999999999998765432 3445677889999999999999999999999999999999
Q ss_pred eccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 839 YLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 839 Y~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|+++++|..++.. ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~---- 155 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK---- 155 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc----
Confidence 9999999999876 35689999999999999999999999999999999999999999999999999875210
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
.......|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+..
T Consensus 156 ----------------------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~ 207 (256)
T cd08530 156 ----------------------------NMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ 207 (256)
T ss_pred ----------------------------CCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 0112245788999999999888999999999999999999999999998887
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
++...+..... +..+..++.+++++|.+||+.+|.+||+ +.++++||++
T Consensus 208 ~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~~l~~p~~ 256 (256)
T cd08530 208 DLRYKVQRGKY--PPIPPIYSQDLQNFIRSMLQVKPKLRPN---CDKILASPAV 256 (256)
T ss_pred HHHHHHhcCCC--CCCchhhCHHHHHHHHHHcCCCcccCCC---HHHHhcCCCC
Confidence 77777665443 3445678999999999999999999999 8899999974
No 245
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.1e-38 Score=335.38 Aligned_cols=250 Identities=24% Similarity=0.353 Sum_probs=208.6
Q ss_pred EeccCCCeEEEEeee--cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 765 PISQGAFGRVFLARK--RATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 765 ~LG~GgFGtVyLArd--k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+||+|+||.||+|.+ ..++..||+|++.... ......+.+.+|+.++..++||||+++++++. .+.+++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 689999999999964 4678899999986543 23445678899999999999999999998875 4567999999999
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 843 GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 843 GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
|+|.+++.....+++..+..++.|++.||.|||++||+||||||.|||++.++.+||+|||++.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~---------- 149 (257)
T cd05116 80 GPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADE---------- 149 (257)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCC----------
Confidence 9999999887789999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDNIM 1001 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl 1001 (1170)
..........+++.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..++...+.
T Consensus 150 -----------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~ 212 (257)
T cd05116 150 -----------------NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE 212 (257)
T ss_pred -----------------CeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 00001112245679999999988889999999999999999997 999999888888888777
Q ss_pred ccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 1002 NRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 1002 ~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
++.. +..+..++.++.+||.+||+.||.+||++..+.+.|+.
T Consensus 213 ~~~~--~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 213 SGER--MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCC--CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 6543 23456799999999999999999999997766665543
No 246
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.8e-38 Score=330.52 Aligned_cols=247 Identities=28% Similarity=0.442 Sum_probs=212.0
Q ss_pred EEeccCCCeEEEEeeecCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeec
Q 001057 764 KPISQGAFGRVFLARKRAT---GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYL 840 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~T---Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~ 840 (1170)
+.||+|+||.||+|.+... +..||+|++...... .....+.+|+.++..++|+||+++++++.+...+|+||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASE--EERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccch--hHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 3699999999999999866 899999998765432 25678899999999999999999999999999999999999
Q ss_pred cCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 841 NGGDLYSLLRNL---------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 841 ~GGSL~dlLk~~---------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 999999999875 67999999999999999999999999999999999999999999999999998753100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g 990 (1170)
. .........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 159 ~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 210 (262)
T cd00192 159 D----------------------------YYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG 210 (262)
T ss_pred c----------------------------ccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence 0 0011234567889999999998889999999999999999999 6999999
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
.+..++.+.+..... ...+..++.++.++|.+||+.||.+||+ +.++++|
T Consensus 211 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~~l~~~ 260 (262)
T cd00192 211 LSNEEVLEYLRKGYR--LPKPEYCPDELYELMLSCWQLDPEDRPT---FSELVER 260 (262)
T ss_pred CCHHHHHHHHHcCCC--CCCCccCChHHHHHHHHHccCCcccCcC---HHHHHHh
Confidence 988888888876332 2345678999999999999999999999 5566654
No 247
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.2e-38 Score=340.66 Aligned_cols=256 Identities=25% Similarity=0.376 Sum_probs=210.9
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCC----------------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATG----------------DLFAIKVLKKADMIRKNAVESILAERNILISVRNPF 819 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TG----------------e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPN 819 (1170)
...+|++++.||+|+||.||+|.+..++ ..||+|.+.... .....+.+.+|+.++..++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 3468999999999999999999876544 568999987643 2345678899999999999999
Q ss_pred EEEEEeeeecccceEEEEeeccCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCc
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-----------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDN 888 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~-----------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPEN 888 (1170)
|++++++|...+.+++||||+.+++|..++.... .+++..+..++.|++.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999998765 68999999999999999999999999999999999
Q ss_pred EEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcc
Q 001057 889 LLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGAT 968 (1170)
Q Consensus 889 ILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 968 (1170)
||++.++.++|+|||+++..... ..........+++.|+|||++.+..++.+
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSS----------------------------DYYRVQGRAPLPIRWMAWESVLLGKFTTK 212 (296)
T ss_pred eeecCCCceEEccccceeecccC----------------------------cceeecCcCCCCceecCHHHhhcCCCCcc
Confidence 99999999999999998742100 00011223456789999999998889999
Q ss_pred hhhhHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhcc-----CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 969 ADWWSVGIILFELLI--GIPPFNAKTPQQIFDNIMNR-----DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 969 sDIWSLGVILYELLT--G~pPF~g~~~~ei~qkIl~~-----~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
+|||||||++|||++ |..||...+...++..+... .......+..++.++.+||.+||+.||.+||++.++.+
T Consensus 213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 999999999999998 78899887777776665432 11111223467899999999999999999999544433
No 248
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=8.6e-39 Score=347.40 Aligned_cols=257 Identities=35% Similarity=0.577 Sum_probs=217.6
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++++.||.|+||.||++.+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++.|...+.+|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 468999999999999999999998899999999986432 23346788999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 837 MEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||+++++|.+++.+. .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~------- 166 (293)
T cd06647 95 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT------- 166 (293)
T ss_pred EecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccc-------
Confidence 9999999999998764 58899999999999999999999999999999999999999999999999886421
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
..........|++.|+|||++.+..++.++|+|||||++|+|++|.+||...+....
T Consensus 167 -----------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~ 223 (293)
T cd06647 167 -----------------------PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223 (293)
T ss_pred -----------------------ccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh
Confidence 000112234689999999999888899999999999999999999999987766544
Q ss_pred HHHHhccC-CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 997 FDNIMNRD-IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 997 ~qkIl~~~-l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...+.... ..++ .+..++..+.+||.+||..+|.+||+ +.+++.||||+..
T Consensus 224 ~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~---~~~il~h~~~~~~ 275 (293)
T cd06647 224 LYLIATNGTPELQ-NPEKLSAIFRDFLNRCLEMDVEKRGS---AKELLQHPFLKIA 275 (293)
T ss_pred eeehhcCCCCCCC-CccccCHHHHHHHHHHccCChhhCcC---HHHHhcCHHHhcC
Confidence 33333222 2222 23467889999999999999999998 8899999999865
No 249
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=4.2e-39 Score=356.02 Aligned_cols=263 Identities=30% Similarity=0.457 Sum_probs=213.8
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec----ccce
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC----RENL 833 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd----~~~L 833 (1170)
++|++.+.||.|+||.||+|.++.+|+.||+|++..... .......+.+|+.+|..++||||++++++|.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 679999999999999999999999999999999875432 22345677889999999999999999988763 3568
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||+. |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++........
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 99999995 69999998777899999999999999999999999999999999999999999999999999875310000
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.........+|+..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+
T Consensus 163 --------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~ 216 (334)
T cd07855 163 --------------------------EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKN 216 (334)
T ss_pred --------------------------CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCC
Confidence 00111224578999999999876 458899999999999999999999998876
Q ss_pred HHHHHHHHhcc----------------------------CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNR----------------------------DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~----------------------------~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
....+..+... ...+..+....+.++.+||.+||+.+|.+||+ +.+++.
T Consensus 217 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~~l~ 293 (334)
T cd07855 217 YVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERIT---VEQALQ 293 (334)
T ss_pred hHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcC---HHHHHh
Confidence 54443332210 00111112356899999999999999999999 789999
Q ss_pred CCCCCCC
Q 001057 1045 HPFFKNI 1051 (1170)
Q Consensus 1045 HPfF~~i 1051 (1170)
||||.+.
T Consensus 294 ~~~~~~~ 300 (334)
T cd07855 294 HPFLAQY 300 (334)
T ss_pred Chhhhhc
Confidence 9999865
No 250
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.6e-38 Score=346.40 Aligned_cols=256 Identities=28% Similarity=0.422 Sum_probs=216.1
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
...|++++.||.|+||+||+|.+..+++.||+|++.............+.+|+.++..++||||++++++|.+.+..|+|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 35699999999999999999999999999999998765444455567788999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+. |+|.+++.. .+.+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~------ 166 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS------ 166 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC------
Confidence 99996 577777754 4569999999999999999999999999999999999999999999999999986420
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
......|++.|+|||++. ...++.++||||||+++|+|++|.+||.+.+
T Consensus 167 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~ 218 (307)
T cd06607 167 ----------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218 (307)
T ss_pred ----------------------------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc
Confidence 011346788999999985 3457889999999999999999999999887
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.......+.....+. ..+..++..+.+||.+||+.||.+||+ +.+++.||||..-
T Consensus 219 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~ 273 (307)
T cd06607 219 AMSALYHIAQNDSPT-LSSNDWSDYFRNFVDSCLQKIPQDRPS---SEELLKHRFVLRE 273 (307)
T ss_pred HHHHHHHHhcCCCCC-CCchhhCHHHHHHHHHHhcCChhhCcC---HHHHhcChhhccc
Confidence 766555544332211 112457889999999999999999999 8899999999764
No 251
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.1e-38 Score=338.19 Aligned_cols=255 Identities=22% Similarity=0.348 Sum_probs=211.2
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRA-----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~-----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
..++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER 81 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 44679999999999999999999987 78899999876432 233456788999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC---cEEEE
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG-------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG---HIKLT 900 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~-------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG---~VKLs 900 (1170)
...|+||||+.|++|.+++...+ .+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 99999999999999999997653 488999999999999999999999999999999999998765 59999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 980 (1170)
|||+++...... .........++..|+|||++.+..++.++|||||||++|+
T Consensus 162 dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~e 213 (277)
T cd05036 162 DFGMARDIYRAS----------------------------YYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWE 213 (277)
T ss_pred cCccccccCCcc----------------------------ceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHH
Confidence 999987521000 0000112233568999999998889999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 981 LLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 981 LLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
|++ |..||.+.+..++...+..... +..+..++..+.+||.+||+.+|.+||+ +.++++|
T Consensus 214 l~~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rps---~~~vl~~ 274 (277)
T cd05036 214 IFSLGYMPYPGRTNQEVMEFVTGGGR--LDPPKGCPGPVYRIMTDCWQHTPEDRPN---FATILER 274 (277)
T ss_pred HHcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCCcccCcC---HHHHHHH
Confidence 997 9999999888777776654322 1234678999999999999999999999 6666665
No 252
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-38 Score=341.75 Aligned_cols=254 Identities=20% Similarity=0.345 Sum_probs=212.8
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRAT-----GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~T-----Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
...+|++++.||.|+||.||+|.+..+ +..||||++.... .....+.+.+|+.++..++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~ 80 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE 80 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 445788999999999999999987543 5789999987542 233456788999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~----------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
..+++++||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence 9999999999999999998531 247888899999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
+.+||+|||+++..... ..........+++.|+|||++.+..++.++|||||
T Consensus 161 ~~~kl~Dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 212 (283)
T cd05091 161 LNVKISDLGLFREVYAA----------------------------DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSY 212 (283)
T ss_pred CceEecccccccccccc----------------------------hheeeccCccCCccccCHHHHhcCCCCcchhHHHH
Confidence 99999999998742100 00011223456789999999998889999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 975 GIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 975 GVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
||++|||++ |.+||.+....+++..+...... ..+..++.++.+||.+||+.+|.+||+ +.+|+.
T Consensus 213 G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~RP~---~~~i~~ 278 (283)
T cd05091 213 GVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL--PCPDDCPAWVYTLMLECWNEFPSRRPR---FKDIHS 278 (283)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHhCCCcccCCC---HHHHHH
Confidence 999999998 99999998888888888876543 245689999999999999999999999 445543
No 253
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.9e-39 Score=378.15 Aligned_cols=269 Identities=25% Similarity=0.351 Sum_probs=201.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCC-CCEEEEE--------------EeeccccccHHHHHHHHHHHHHHHhcCCCc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRAT-GDLFAIK--------------VLKKADMIRKNAVESILAERNILISVRNPF 819 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~T-Ge~VAIK--------------vLkKs~i~~~~~ve~~l~EieILskL~HPN 819 (1170)
...++|++++.||+|+||+||+|..+.. +..+++| ++.+...........+.+|+.+|..++|||
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence 3457899999999999999999876532 2222222 111111112234566889999999999999
Q ss_pred EEEEEeeeecccceEEEEeeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~-----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
||++++++...+..|+||+++ +++|..++... .......++.++.||+.||.|||++|||||||||+||||+.+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 999999999999999999999 56888877542 234466788899999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
|.+||+|||+|+.... .........+||+.|+|||++.+..|+.++|||||
T Consensus 304 ~~vkL~DFGla~~~~~-----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 354 (501)
T PHA03210 304 GKIVLGDFGTAMPFEK-----------------------------EREAFDYGWVGTVATNSPEILAGDGYCEITDIWSC 354 (501)
T ss_pred CCEEEEeCCCceecCc-----------------------------ccccccccccCCcCCCCchhhcCCCCCcHHHHHHH
Confidence 9999999999975210 00112234689999999999999999999999999
Q ss_pred HHHHHHHHhCCCC-CCCC--CHHHHHHHHhcc----CCCCCC----------------C---------CccCCHHHHHHH
Q 001057 975 GIILFELLIGIPP-FNAK--TPQQIFDNIMNR----DIPWPN----------------I---------PEEMSVEACDLI 1022 (1170)
Q Consensus 975 GVILYELLTG~pP-F~g~--~~~ei~qkIl~~----~l~fP~----------------i---------p~~lS~eakDLI 1022 (1170)
||+||||++|..+ |... .....+..+... ...+|. . ...++.++.++|
T Consensus 355 Gvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li 434 (501)
T PHA03210 355 GLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPL 434 (501)
T ss_pred HHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHH
Confidence 9999999998754 4322 222222222110 001110 0 013567788999
Q ss_pred HHhccCCCCCCCChhhHHHHHcCCCCCCCChhhh
Q 001057 1023 DKLLTENPVQRLGATGAREVKQHPFFKNINWDTL 1056 (1170)
Q Consensus 1023 kkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L 1056 (1170)
.+||++||.+||+ |.|+|.||||.....+.+
T Consensus 435 ~kmL~~DP~~Rps---a~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 435 VKMLTFDWHLRPG---AAELLALPLFSAEEEEEI 465 (501)
T ss_pred HHHhccCcccCcC---HHHHhhChhhhcCCchHH
Confidence 9999999999999 889999999998765543
No 254
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.7e-38 Score=332.33 Aligned_cols=247 Identities=28% Similarity=0.383 Sum_probs=204.4
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCC
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGD 844 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGS 844 (1170)
.||.|+||.||+|+++.+++.||+|.+.... .......+.+|+.+++.++||||+++++++.....+|+||||+++++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 6999999999999999999999999876432 34455678999999999999999999999999999999999999999
Q ss_pred hHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 845 LYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 845 L~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~------------- 146 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEED------------- 146 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccc-------------
Confidence 99999764 4589999999999999999999999999999999999999999999999999874210
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~ 1002 (1170)
+.. ........++..|+|||++.+..++.++|||||||++|+|++ |.+||...+.......+..
T Consensus 147 -~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~ 211 (252)
T cd05084 147 -GVY--------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ 211 (252)
T ss_pred -ccc--------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence 000 000001123457999999998889999999999999999997 9999988777666665554
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
... +..+...+..+.+||.+||+.||.+||++.++.+.|
T Consensus 212 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 250 (252)
T cd05084 212 GVR--LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250 (252)
T ss_pred CCC--CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 321 123467889999999999999999999966555444
No 255
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.2e-38 Score=336.08 Aligned_cols=252 Identities=24% Similarity=0.378 Sum_probs=214.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++++.||.|+||.||+|++.. +..+|+|++.... ......+..|+.+++.++||||+++++++.+...+|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDD---LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccc---hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3579999999999999999999987 8899999987653 23345688899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 837 MEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~---- 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE---- 156 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCC----
Confidence 9999999999999763 4689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~ 993 (1170)
.........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.
T Consensus 157 --------------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~ 210 (261)
T cd05148 157 --------------------------DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN 210 (261)
T ss_pred --------------------------ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 0000112345678999999998889999999999999999998 8999999888
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+++..+.... .. ..+..++..+.++|.+||+.||.+||++..+.+.|+
T Consensus 211 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 211 HEVYDQITAGY-RM-PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred HHHHHHHHhCC-cC-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 88888777542 22 234678999999999999999999999666655543
No 256
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.9e-38 Score=352.01 Aligned_cols=256 Identities=30% Similarity=0.474 Sum_probs=212.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE----- 831 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~----- 831 (1170)
.++|++++.||.|+||.||+|.+..+|..||||++.+.. ........+.+|+.+|+.++||||++++++|....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 467999999999999999999999999999999986532 22334557889999999999999999999987654
Q ss_pred -ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 832 -NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 832 -~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
.+|+||||+ |++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~- 169 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTD- 169 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccc-
Confidence 358999999 7799888864 579999999999999999999999999999999999999999999999999987420
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.......+++.|+|||++.+ ..++.++|+|||||++|+|++|.+||.
T Consensus 170 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 170 --------------------------------SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred --------------------------------cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 01123467899999999976 457889999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCCC----------------------------CCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 990 AKTPQQIFDNIMNRDIPW----------------------------PNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~f----------------------------P~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
+.+....+..++...... ......++.++.++|.+||+.||.+||+ +.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t---~~~ 294 (343)
T cd07880 218 GHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRIT---AAE 294 (343)
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCC---HHH
Confidence 877665555443321110 0112357888999999999999999999 789
Q ss_pred HHcCCCCCCC
Q 001057 1042 VKQHPFFKNI 1051 (1170)
Q Consensus 1042 ILqHPfF~~i 1051 (1170)
++.||||+..
T Consensus 295 ~l~~~~~~~~ 304 (343)
T cd07880 295 ALAHPYFEEF 304 (343)
T ss_pred HhcCccHhhh
Confidence 9999999865
No 257
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4e-38 Score=332.84 Aligned_cols=252 Identities=24% Similarity=0.351 Sum_probs=207.2
Q ss_pred eEEEEEeccCCCeEEEEeeecC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc----
Q 001057 760 FEIIKPISQGAFGRVFLARKRA---TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN---- 832 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~---TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~---- 832 (1170)
|++.+.||+|+||.||+|.... ++..||+|.++... ........+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5788999999999999998764 34789999987543 234456788999999999999999999988765443
Q ss_pred --eEEEEeeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 833 --LYLVMEYLNGGDLYSLLRNL------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 833 --LyLVMEY~~GGSL~dlLk~~------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
.++||||+++|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999998542 3589999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI- 983 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT- 983 (1170)
++....... ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~----------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~ 211 (273)
T cd05035 160 SKKIYSGDY----------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 211 (273)
T ss_pred eeecccccc----------------------------ccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhC
Confidence 875310000 001112234678999999988889999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 984 GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 984 G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
|.+||.+....++++.+..+.. +..+..++..+.++|.+||+.||.+||++.++...
T Consensus 212 g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 212 GQTPYPGVENHEIYDYLRHGNR--LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC--CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999888888877765532 23456889999999999999999999995544443
No 258
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-41 Score=365.05 Aligned_cols=258 Identities=32% Similarity=0.555 Sum_probs=226.7
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.+-|.++.+||+|+||.||+|.++.+|..+|||.+... ..++.+..|+.||.++++|+||++|+.|.....++||
T Consensus 32 EEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 32 EEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence 34599999999999999999999999999999987643 4567899999999999999999999999988899999
Q ss_pred EeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||||..|++.++++. ++.|+++++..+++..+.||+|||...-||||||..||||+.+|+.||+|||.|...
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL------- 179 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQL------- 179 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchh-------
Confidence 999999999999974 468999999999999999999999999999999999999999999999999998642
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
+......++..|||.|||||++..-+|+..+||||||++..||..|++||....++.
T Consensus 180 -----------------------TDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR 236 (502)
T KOG0574|consen 180 -----------------------TDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR 236 (502)
T ss_pred -----------------------hhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc
Confidence 122335578899999999999999999999999999999999999999999887765
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.+-.|-....+--..|...|.++.|||++||-++|++|-+ |-++++|||.++..
T Consensus 237 AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~T---A~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 237 AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKT---ALRLCEHTFIKNAP 290 (502)
T ss_pred eeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHH---HHHHhhhhhhcCCC
Confidence 5444433333222345678999999999999999999987 88999999998653
No 259
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-39 Score=375.29 Aligned_cols=249 Identities=33% Similarity=0.537 Sum_probs=214.3
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCC
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGD 844 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGS 844 (1170)
+||+|.||+||.|++..|....|||.+... .....+-+..|+.+.+.|+|.|||++++++...+++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 699999999999999999999999988653 23556778899999999999999999999999999999999999999
Q ss_pred hHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCccccccccCCCCCCCC
Q 001057 845 LYSLLRNL-GCL--DEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKVGLIHSTDDLSAPS 920 (1170)
Q Consensus 845 L~dlLk~~-~~L--SEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~~~~~~~~d~~a~s 920 (1170)
|.++|+.. +++ .|..+-+|.+||++||.|||++.|||||||-+|+||+. .|.+||+|||-++...
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA----------- 727 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA----------- 727 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc-----------
Confidence 99999865 777 88899999999999999999999999999999999974 6899999999998631
Q ss_pred CCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC--CCCcchhhhHHHHHHHHHHhCCCCCCCCC--HHHH
Q 001057 921 LGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM--GHGATADWWSVGIILFELLIGIPPFNAKT--PQQI 996 (1170)
Q Consensus 921 l~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLTG~pPF~g~~--~~ei 996 (1170)
.-...+.++.||..|||||++... +|+.++|||||||++.||.||+|||.... ...+
T Consensus 728 -------------------ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM 788 (1226)
T KOG4279|consen 728 -------------------GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM 788 (1226)
T ss_pred -------------------cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh
Confidence 112234578999999999999754 69999999999999999999999997433 3333
Q ss_pred HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 997 FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 997 ~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
++-=+ -+ .-|++|..+|.+++.||.+|+.+||..||+ |.++|..||++.-
T Consensus 789 FkVGm-yK-vHP~iPeelsaeak~FilrcFepd~~~R~s---A~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 789 FKVGM-YK-VHPPIPEELSAEAKNFILRCFEPDPCDRPS---AKDLLQDPFLQHN 838 (1226)
T ss_pred hhhcc-ee-cCCCCcHHHHHHHHHHHHHHcCCCcccCcc---HHHhccCcccccC
Confidence 33211 11 235677999999999999999999999999 8899999999864
No 260
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=3.4e-38 Score=335.72 Aligned_cols=253 Identities=34% Similarity=0.542 Sum_probs=208.5
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc---CCCcEEEEEeeeecccc----
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV---RNPFVVRFFYSFTCREN---- 832 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL---~HPNIVrL~~~Fqd~~~---- 832 (1170)
|++.+.||.|+||.||+|+++.+++.||+|++..... .......+.+|+.++..+ +||||+++++++.+.+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 7889999999999999999998999999999875432 222334566788777665 59999999999988776
Q ss_pred -eEEEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 833 -LYLVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 833 -LyLVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
+|++|||+. ++|.+++.... .+++..++.++.||+.||.|||++||+|+||+|+|||++.++.++|+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999996 48999887643 58999999999999999999999999999999999999999999999999987421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
. ........+++.|+|||++.+..++.++|||||||++|+|++|.+||.
T Consensus 159 ~-------------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~ 207 (287)
T cd07838 159 F-------------------------------EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFR 207 (287)
T ss_pred C-------------------------------CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCccc
Confidence 0 001122357889999999999889999999999999999999999999
Q ss_pred CCCHHHHHHHHhccC-----CCCC-------------------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 990 AKTPQQIFDNIMNRD-----IPWP-------------------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~-----l~fP-------------------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
+.+..+.+..+.... ..++ .....++..+.+||.+||+.||.+||+ +.+++.|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~---~~~il~~ 284 (287)
T cd07838 208 GTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRIS---AFEALQH 284 (287)
T ss_pred CCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCC---HHHHhcC
Confidence 988777766664311 0111 001245688899999999999999999 8899999
Q ss_pred CCC
Q 001057 1046 PFF 1048 (1170)
Q Consensus 1046 PfF 1048 (1170)
|||
T Consensus 285 ~~~ 287 (287)
T cd07838 285 PYF 287 (287)
T ss_pred cCC
Confidence 998
No 261
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-38 Score=340.06 Aligned_cols=254 Identities=31% Similarity=0.545 Sum_probs=209.6
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|++++.||.|++|.||+|.++.+|..||+|++..... .......+.+|+.+++.++||||+++++++.+.+..|+||||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6788999999999999999999999999999875432 223345678899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 840 LNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
++ ++|.+++.... .+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~------- 151 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGV------- 151 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCC-------
Confidence 94 69999997765 689999999999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
.........+++.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+....
T Consensus 152 -----------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 208 (283)
T cd07835 152 -----------------------PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ 208 (283)
T ss_pred -----------------------CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 00011223568899999988764 468899999999999999999999988776544
Q ss_pred HHHHhccCC------------------CC--------CCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 997 FDNIMNRDI------------------PW--------PNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 997 ~qkIl~~~l------------------~f--------P~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
...+..... .+ ......++..+.+||.+||+.||.+||+ +.+++.||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~il~~~~~ 283 (283)
T cd07835 209 LFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRIS---AKAALQHPYF 283 (283)
T ss_pred HHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcC---HHHHhcCCCC
Confidence 443322100 00 1112457789999999999999999999 8899999998
No 262
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.8e-39 Score=351.08 Aligned_cols=261 Identities=31% Similarity=0.460 Sum_probs=219.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----ce
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE-----NL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~-----~L 833 (1170)
+|++.+.||.|+||.||+|++..+++.||||++.+.. ......+.+.+|+.+++.++||||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999999999999999987642 12345567889999999999999999999988775 79
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+||||++ ++|..++.+...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~- 157 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE- 157 (330)
T ss_pred EEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc-
Confidence 99999996 5899999887789999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
..........||+.|+|||++.+. .++.++|+|||||++|+|++|.+||.+.+
T Consensus 158 --------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~ 211 (330)
T cd07834 158 --------------------------DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD 211 (330)
T ss_pred --------------------------cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC
Confidence 000112334689999999999887 78999999999999999999999999988
Q ss_pred HHHHHHHHhccCCC----------------------------CCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIP----------------------------WPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~----------------------------fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
..+.+..+...... +......++.++.+||.+||+++|.+||+ +.+++.
T Consensus 212 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~ll~ 288 (330)
T cd07834 212 YIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT---ADEALA 288 (330)
T ss_pred HHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC---HHHHHh
Confidence 87776666542111 00112346889999999999999999999 889999
Q ss_pred CCCCCCC
Q 001057 1045 HPFFKNI 1051 (1170)
Q Consensus 1045 HPfF~~i 1051 (1170)
||||+++
T Consensus 289 ~~~~~~~ 295 (330)
T cd07834 289 HPYLAQL 295 (330)
T ss_pred CccHHhh
Confidence 9999875
No 263
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4e-38 Score=338.76 Aligned_cols=257 Identities=24% Similarity=0.398 Sum_probs=212.8
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCC-----CEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeee
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATG-----DLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSF 827 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TG-----e~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~F 827 (1170)
.+..++|++.+.||+|+||.||++.....+ ..||+|.+.... .......+.+|+.++..+ +||||+++++++
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 455578999999999999999999876443 789999987542 233456788999999999 799999999999
Q ss_pred ecccceEEEEeeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEe
Q 001057 828 TCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLI 891 (1170)
Q Consensus 828 qd~~~LyLVMEY~~GGSL~dlLk~~----------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILL 891 (1170)
.....+|+||||+++|+|..++... ..+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 9999999999999999999999642 358899999999999999999999999999999999999
Q ss_pred CCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhh
Q 001057 892 GQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADW 971 (1170)
Q Consensus 892 d~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDI 971 (1170)
+.++.+||+|||+++...... .........++..|+|||++.+..++.++||
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 217 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHID----------------------------YYRKTTNGRLPVKWMAPEALFDRVYTHQSDV 217 (293)
T ss_pred cCCCeEEeCcccccccccccc----------------------------ceeccCCCCCCccccCHHHhccCCcCcccce
Confidence 999999999999987521000 0000111234678999999998899999999
Q ss_pred hHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 972 WSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 972 WSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
|||||++|||++ |..||.+....+.++.+..... +..+...+..+.+||.+||..||.+||+ +.+++++
T Consensus 218 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps---~~eil~~ 287 (293)
T cd05053 218 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR--MEKPQNCTQELYHLMRDCWHEVPSQRPT---FKQLVED 287 (293)
T ss_pred eehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccCcccCcC---HHHHHHH
Confidence 999999999997 9999999888888877765432 2234578899999999999999999999 5555543
No 264
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=5.5e-38 Score=337.50 Aligned_cols=257 Identities=23% Similarity=0.413 Sum_probs=214.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRA-----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~-----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
..++|++++.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+.++..++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999998753 67899999987542 234456788899999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG----------------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDN 888 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~----------------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPEN 888 (1170)
..+|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997432 36788889999999999999999999999999999
Q ss_pred EEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcc
Q 001057 889 LLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGAT 968 (1170)
Q Consensus 889 ILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~k 968 (1170)
||++.++.++|+|||++....... .........++..|+|||++.+..++.+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 212 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSAD----------------------------YYKASENDAIPIRWMPPESIFYNRYTTE 212 (288)
T ss_pred eEecCCCceEECccccceecccCc----------------------------cccccCCCccChhhcCHHHHhcCCCCch
Confidence 999999999999999987421000 0000112234567999999998899999
Q ss_pred hhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 969 ADWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 969 sDIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+|||||||++|+|++ |..||.+.+..+....+..+... ..+..++.++.+||.+||+.||.+||++.++...|+
T Consensus 213 ~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 213 SDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL--SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 999999999999997 88999998888888877765542 234678899999999999999999999766666554
No 265
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.7e-38 Score=330.72 Aligned_cols=247 Identities=26% Similarity=0.459 Sum_probs=207.4
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeee-ecccceE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSF-TCRENLY 834 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~F-qd~~~Ly 834 (1170)
...+|++.+.||+|+||.||++... |..||+|.+... ...+.+.+|+.+++.++|+||+++++++ .....+|
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05082 4 NMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY 76 (256)
T ss_pred cHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceE
Confidence 4568999999999999999999764 788999987643 2345688999999999999999999875 4556799
Q ss_pred EEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+||||+++++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~-- 154 (256)
T cd05082 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS-- 154 (256)
T ss_pred EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc--
Confidence 9999999999999997653 488999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
......++..|+|||++.+..++.++|||||||++|+|++ |.+||...
T Consensus 155 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~ 203 (256)
T cd05082 155 -------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred -------------------------------cCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 0012234568999999998889999999999999999997 99999988
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+..++...+..+.. +..+..+++.+.+||.+||+.+|.+||++.++.+.|+
T Consensus 204 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 204 PLKDVVPRVEKGYK--MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 88777777755422 2344678999999999999999999999666655554
No 266
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.2e-38 Score=337.53 Aligned_cols=255 Identities=27% Similarity=0.409 Sum_probs=212.7
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeec-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKR-----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk-----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
...+|.+.++||+|+||.||+|... .++..+|+|.+.... ......+.+|++++..++||||+++++++.+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 3 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred ChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 4467999999999999999999743 356789999876542 34566889999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG---------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG 895 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~---------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG 895 (1170)
..+|+||||+++|+|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 99999999999999999997643 478899999999999999999999999999999999999999
Q ss_pred cEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHH
Q 001057 896 HIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVG 975 (1170)
Q Consensus 896 ~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLG 975 (1170)
.+||+|||++...... ..........+++.|+|||++.+..++.++||||||
T Consensus 160 ~~kL~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 211 (280)
T cd05092 160 VVKIGDFGMSRDIYST----------------------------DYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFG 211 (280)
T ss_pred CEEECCCCceeEcCCC----------------------------ceeecCCCccccccccCHHHhccCCcCchhhHHHHH
Confidence 9999999998742100 000111233467889999999998999999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 976 IILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 976 VILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
|++|+|++ |.+||......+....+..+... ..+..+++.+.+||.+||+.||.+||++.++.+.|
T Consensus 212 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l 278 (280)
T cd05092 212 VVLWEIFTYGKQPWYQLSNTEAIECITQGREL--ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRL 278 (280)
T ss_pred HHHHHHHcCCCCCCccCCHHHHHHHHHcCccC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 99999998 99999888877777777654322 23457899999999999999999999966555444
No 267
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.8e-38 Score=338.42 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=213.6
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeec-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKR-----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk-----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
...+|.+.+.||+|+||.||+|++. .++..+|+|.+.... ......+.+|+.++..++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 3467999999999999999999854 345679999876532 33446788999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
..+++||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999997542 37899999999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
+.++|+|||++...... ..........|++.|+|||++.+..++.++|||||
T Consensus 160 ~~~~l~dfg~a~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 211 (291)
T cd05094 160 LLVKIGDFGMSRDVYST----------------------------DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 211 (291)
T ss_pred CcEEECCCCcccccCCC----------------------------ceeecCCCCCcceeecChHHhccCCCCchhhHHHH
Confidence 99999999998742100 00011223457889999999999899999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 975 GIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 975 GVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
||++|+|++ |.+||...+..+..+.+..+... ..+..++..+.+||.+||+.||.+||++.++.+.++
T Consensus 212 G~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 212 GVILWEIFTYGKQPWFQLSNTEVIECITQGRVL--ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCC--CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 999999998 99999988888887777665443 234567899999999999999999999666555543
No 268
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.7e-38 Score=344.57 Aligned_cols=255 Identities=24% Similarity=0.365 Sum_probs=207.9
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCE----EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDL----FAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~----VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
+...+|++++.||+|+||+||+|++..+++. ||+|++.... .....+.+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 3456899999999999999999998766654 8999886432 234556788999999999999999999988764
Q ss_pred cceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..++|+||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 578999999999999999875 468899999999999999999999999999999999999999999999999998531
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPF 988 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF 988 (1170)
... .........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 161 ~~~----------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~ 212 (316)
T cd05108 161 ADE----------------------------KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 212 (316)
T ss_pred CCC----------------------------cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 000 0001112334678999999999999999999999999999997 99999
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 989 NAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
.+....++...+.. ...++ .+..++.++.++|.+||..||.+||+ +.+++.+
T Consensus 213 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps---~~~l~~~ 264 (316)
T cd05108 213 DGIPASEISSILEK-GERLP-QPPICTIDVYMIMVKCWMIDADSRPK---FRELIIE 264 (316)
T ss_pred CCCCHHHHHHHHhC-CCCCC-CCCCCCHHHHHHHHHHccCChhhCcC---HHHHHHH
Confidence 98877666544433 33333 23567889999999999999999999 5555554
No 269
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.9e-38 Score=332.16 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=205.6
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------c
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGD--LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR------E 831 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe--~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~------~ 831 (1170)
|.+.+.||+|+||.||+|++..++. .||+|.++... ......+.+..|+.++..++||||+++++.+... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999999887775 69999887542 2445567888999999999999999999865322 2
Q ss_pred ceEEEEeeccCCChHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 832 NLYLVMEYLNGGDLYSLLRN------LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~------~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
..++||||+.+|+|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 57899999999999988742 134889999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-C
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-G 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G 984 (1170)
+...... .........+++.|+|||++.+..++.++|||||||++|||++ |
T Consensus 160 ~~~~~~~----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g 211 (272)
T cd05075 160 KKIYNGD----------------------------YYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRG 211 (272)
T ss_pred cccCccc----------------------------ceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCC
Confidence 7521000 0001122346778999999999889999999999999999999 8
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.+||.+....+++..+.++... ..+..++..+.++|.+||+.||.+||++.++.+.|
T Consensus 212 ~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 268 (272)
T cd05075 212 QTPYPGVENSEIYDYLRQGNRL--KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCEL 268 (272)
T ss_pred CCCCCCCCHHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 9999988888888877765432 23357889999999999999999999955444333
No 270
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=9.2e-38 Score=331.48 Aligned_cols=255 Identities=22% Similarity=0.305 Sum_probs=212.6
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRAT---GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~T---Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.++|++.+.||+|+||+||+|+++.+ ...||+|++.... .......+.+|+.++..++||||+++++++...+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 46799999999999999999998654 4589999886542 344556788999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
|+||||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~- 159 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS- 159 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc-
Confidence 9999999999999999764 46899999999999999999999999999999999999999999999999999853100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
..........+++.|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus 160 ---------------------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~ 212 (266)
T cd05033 160 ---------------------------EATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM 212 (266)
T ss_pred ---------------------------ccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC
Confidence 00001112335678999999998889999999999999999997 99999888
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
...+....+...... + .+...+..+.+|+.+||+.+|.+||++.++.+.|
T Consensus 213 ~~~~~~~~~~~~~~~-~-~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l 262 (266)
T cd05033 213 SNQDVIKAVEDGYRL-P-PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTL 262 (266)
T ss_pred CHHHHHHHHHcCCCC-C-CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 888777777654321 1 2357899999999999999999999955444443
No 271
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=7.7e-38 Score=332.05 Aligned_cols=249 Identities=22% Similarity=0.382 Sum_probs=209.5
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++++.||.|+||+||+|.... +..||+|.+..... ..+.+.+|+.++..++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence 4679999999999999999998754 44699998875432 235688999999999999999999999998999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++....
T Consensus 78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~----- 152 (256)
T cd05113 78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD----- 152 (256)
T ss_pred EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCC-----
Confidence 9999999999999764 4689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ 994 (1170)
..........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..
T Consensus 153 ------------------------~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~ 208 (256)
T cd05113 153 ------------------------DEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS 208 (256)
T ss_pred ------------------------CceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH
Confidence 00001112345678999999998889999999999999999998 99999988888
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+....+..+...+ .+...+..+.++|.+||+.||.+||+ +.+++.
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~---~~~ll~ 253 (256)
T cd05113 209 ETVEKVSQGLRLY--RPHLASEKVYAIMYSCWHEKAEERPT---FQQLLS 253 (256)
T ss_pred HHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCcccCCC---HHHHHH
Confidence 8888777654432 23567899999999999999999999 556654
No 272
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.9e-38 Score=334.06 Aligned_cols=253 Identities=23% Similarity=0.376 Sum_probs=208.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGD----LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe----~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
+...+|++++.||.|+||+||+|++..+++ .||+|++.... .......+.+|+.++..++||||+++++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 345789999999999999999999877776 48999886532 33445678899999999999999999998875
Q ss_pred cceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
...+++|||+++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 4578999999999999999764 569999999999999999999999999999999999999999999999999987531
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPF 988 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF 988 (1170)
... .........+++.|+|||++.+..++.++|||||||++|||++ |.+||
T Consensus 161 ~~~----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 212 (279)
T cd05109 161 IDE----------------------------TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPY 212 (279)
T ss_pred ccc----------------------------ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence 000 0000112235678999999998889999999999999999998 99999
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 989 NAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.......+...+...... ..+...+.++.++|.+||+.||.+||+ +.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~---~~~l~ 262 (279)
T cd05109 213 DGIPAREIPDLLEKGERL--PQPPICTIDVYMIMVKCWMIDSECRPR---FRELV 262 (279)
T ss_pred CCCCHHHHHHHHHCCCcC--CCCccCCHHHHHHHHHHcCCChhhCcC---HHHHH
Confidence 888777766666544322 234578999999999999999999999 44555
No 273
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.1e-38 Score=339.79 Aligned_cols=247 Identities=25% Similarity=0.393 Sum_probs=206.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGD--LFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe--~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~Ly 834 (1170)
++|++.+.||.|+||.||+|+...++. .+|+|.++.. ......+.+.+|+.++.++ +||||+++++++.....+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877765 4688877632 2334456788999999999 7999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEE
Q 001057 835 LVMEYLNGGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VK 898 (1170)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997532 478899999999999999999999999999999999999999999
Q ss_pred EEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHH
Q 001057 899 LTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIIL 978 (1170)
Q Consensus 899 LsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVIL 978 (1170)
|+|||++..... ........++..|+|||++.+..++.++|||||||++
T Consensus 160 l~dfg~~~~~~~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 208 (297)
T cd05089 160 IADFGLSRGEEV-------------------------------YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL 208 (297)
T ss_pred ECCcCCCccccc-------------------------------eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHH
Confidence 999999863100 0000111234579999999988899999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 979 FELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 979 YELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
|||++ |.+||.+.+..+.+..+..+.. +..+..++..+.+||.+||+.+|.+||++.++
T Consensus 209 ~el~t~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i 268 (297)
T cd05089 209 WEIVSLGGTPYCGMTCAELYEKLPQGYR--MEKPRNCDDEVYELMRQCWRDRPYERPPFAQI 268 (297)
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 99997 9999999888888877765432 22346789999999999999999999994443
No 274
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7e-38 Score=333.30 Aligned_cols=253 Identities=24% Similarity=0.404 Sum_probs=213.9
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRA-----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~-----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
.++|++++.||.|+||.||+|+.+. +.+.||+|.+.... .....+.+.+|+.+|.+++||||+++++++.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 4689999999999999999999754 45689999876532 2235677899999999999999999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEec
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLG---------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDF 902 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~---------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDF 902 (1170)
..|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999999998655 6899999999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELL 982 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 982 (1170)
|++..... ..........++..|+|||.+.+..++.++|||||||++|+|+
T Consensus 162 ~~~~~~~~-----------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~ 212 (275)
T cd05046 162 SLSKDVYN-----------------------------SEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVF 212 (275)
T ss_pred ccccccCc-----------------------------ccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHH
Confidence 99864210 0000112335677899999998888899999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 983 I-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 983 T-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+ |..||........+..+..+...++ .+..++..+.++|.+||+.||.+||+ +.+++.
T Consensus 213 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp~---~~~~l~ 271 (275)
T cd05046 213 TQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRPS---FSELVS 271 (275)
T ss_pred hCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCCC---HHHHHH
Confidence 8 8999988887788888776666554 34578899999999999999999999 555554
No 275
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=9e-38 Score=330.67 Aligned_cols=253 Identities=25% Similarity=0.383 Sum_probs=211.2
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++.+.||.|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.++.+++||||+++++++...+.+|+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 78 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYI 78 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeee
Confidence 3467999999999999999999975 457899999875432 23567889999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~-- 156 (261)
T cd05068 79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKED-- 156 (261)
T ss_pred eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC--
Confidence 999999999999997654 6899999999999999999999999999999999999999999999999999753100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.........++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.+
T Consensus 157 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 209 (261)
T cd05068 157 ---------------------------IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT 209 (261)
T ss_pred ---------------------------cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence 0000011223468999999998889999999999999999999 999999988
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
....+..+.... ..+ .+..++..+.+||.+||+.+|.+||++.++.+.|+
T Consensus 210 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 210 NAEVLQQVDQGY-RMP-CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred HHHHHHHHHcCC-CCC-CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 887777775442 222 34578899999999999999999999666655543
No 276
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.7e-38 Score=331.00 Aligned_cols=251 Identities=25% Similarity=0.425 Sum_probs=208.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++++.||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++. ....|+
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~l 77 (260)
T cd05070 4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYI 77 (260)
T ss_pred chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEE
Confidence 3468999999999999999999876 566799999876432 2346889999999999999999998875 456899
Q ss_pred EEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~-- 155 (260)
T cd05070 78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDN-- 155 (260)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCc--
Confidence 99999999999999763 35899999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus 156 ---------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~ 208 (260)
T cd05070 156 ---------------------------EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 208 (260)
T ss_pred ---------------------------ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC
Confidence 0001112335678999999988889999999999999999999 999999888
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..++...+.... .. ..+...+..+.+||.+||..||.+||++..+.++|
T Consensus 209 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l 257 (260)
T cd05070 209 NREVLEQVERGY-RM-PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFL 257 (260)
T ss_pred HHHHHHHHHcCC-CC-CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHH
Confidence 888777776532 22 23467899999999999999999999966665554
No 277
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.6e-37 Score=329.33 Aligned_cols=257 Identities=22% Similarity=0.330 Sum_probs=212.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGD---LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe---~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
..++|+..+.||+|+||.||+|+.+.++. .+|+|.+.... .....+.+..|+.++..++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP 80 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence 44679999999999999999999876654 79999886542 23345678899999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
+|+||||+++++|..++... +.+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999999999764 57899999999999999999999999999999999999999999999999998742100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g 990 (1170)
. ...........++.|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 161 ~---------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 161 P---------------------------EGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred c---------------------------ccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 0 00000111223567999999998889999999999999999997 9999998
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.+..++...+.... ..| .+..++..+.+||.+||+.+|.+||++.++.+.|
T Consensus 214 ~~~~~~~~~i~~~~-~~~-~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l 264 (268)
T cd05063 214 MSNHEVMKAINDGF-RLP-APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLL 264 (268)
T ss_pred CCHHHHHHHHhcCC-CCC-CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 88888887776542 222 2356789999999999999999999965554443
No 278
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-37 Score=328.99 Aligned_cols=249 Identities=22% Similarity=0.317 Sum_probs=206.2
Q ss_pred EEeccCCCeEEEEeeecCCC---CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeec
Q 001057 764 KPISQGAFGRVFLARKRATG---DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYL 840 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TG---e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~ 840 (1170)
++||+|+||.||+|....++ ..||+|.+...... ...+.+.+|+.+++.++||||+++++++. ...+++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999876554 79999998765432 34567889999999999999999999776 45689999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCC
Q 001057 841 NGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPS 920 (1170)
Q Consensus 841 ~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~s 920 (1170)
.+|+|.+++.....+++..+..++.|++.||.|||.+||+||||||+|||++.++.+||+|||+++......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~-------- 149 (257)
T cd05060 78 PLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGS-------- 149 (257)
T ss_pred CCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCC--------
Confidence 999999999888789999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 001057 921 LGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDN 999 (1170)
Q Consensus 921 l~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qk 999 (1170)
..........++..|+|||.+.+..++.++|||||||++|+|++ |.+||...+..++...
T Consensus 150 -------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~ 210 (257)
T cd05060 150 -------------------DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAM 210 (257)
T ss_pred -------------------cccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 00000111224568999999998889999999999999999997 9999998887777777
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+..... ...+..++..+++||.+||..+|.+||++.++.++++
T Consensus 211 ~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~ 253 (257)
T cd05060 211 LESGER--LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFR 253 (257)
T ss_pred HHcCCc--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 655432 2344678899999999999999999999766666554
No 279
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=5.3e-38 Score=338.62 Aligned_cols=268 Identities=29% Similarity=0.471 Sum_probs=209.4
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR------ 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~------ 830 (1170)
.++|+++++||.|+||.||+|.++.+++.||||++...... ......+.+|+.+++.++||||+++++.+.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEK-DGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCC-CCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 68999999999999999999999999999999998654321 12234567899999999999999999877543
Q ss_pred --cceEEEEeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 831 --ENLYLVMEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 831 --~~LyLVMEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
..+|+||||+. ++|...+.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 164 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchh
Confidence 34799999995 478777765 35799999999999999999999999999999999999999999999999999875
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCC
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~p 986 (1170)
....... .. .. ............|++.|+|||++.+. .++.++|||||||++|+|++|.+
T Consensus 165 ~~~~~~~------~~------------~~-~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~ 225 (311)
T cd07866 165 YDGPPPN------PK------------GG-GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRP 225 (311)
T ss_pred ccCCCcc------cc------------cC-CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCC
Confidence 3110000 00 00 00011122345789999999998754 57899999999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCC--------------------CCCC-------CccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 987 PFNAKTPQQIFDNIMNRDIP--------------------WPNI-------PEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~~~l~--------------------fP~i-------p~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
||.+.+.......+...... .... ...++..+.+||.+||+.||.+||+ +
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t---~ 302 (311)
T cd07866 226 ILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLT---A 302 (311)
T ss_pred CCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcC---H
Confidence 99988876665554421000 0000 0234578899999999999999999 8
Q ss_pred HHHHcCCCC
Q 001057 1040 REVKQHPFF 1048 (1170)
Q Consensus 1040 eEILqHPfF 1048 (1170)
.+++.||||
T Consensus 303 ~ell~~~~f 311 (311)
T cd07866 303 SDALEHPYF 311 (311)
T ss_pred HHHhcCCCC
Confidence 899999998
No 280
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2e-38 Score=349.83 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=206.2
Q ss_pred EEeccC--CCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeecc
Q 001057 764 KPISQG--AFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 764 k~LG~G--gFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
..||+| +||+||+|++..+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|...+.+|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 356666 999999999999999999999875433 23455788899999999999999999999999999999999999
Q ss_pred CCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCC
Q 001057 842 GGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAP 919 (1170)
Q Consensus 842 GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~ 919 (1170)
+++|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++++|||.+........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~------ 156 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQ------ 156 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCc------
Confidence 99999999864 3589999999999999999999999999999999999999999999999986542110000
Q ss_pred CCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC--CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 920 SLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM--GHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 920 sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.. ...........++..|||||++.+. .++.++|||||||++|+|++|.+||.+.......
T Consensus 157 ----~~-------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~ 219 (328)
T cd08226 157 ----KA-------------KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQML 219 (328)
T ss_pred ----cc-------------cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHH
Confidence 00 0000001122356779999999763 4789999999999999999999999887655544
Q ss_pred HHHhccCCCCC--------------------------------------------CCCccCCHHHHHHHHHhccCCCCCC
Q 001057 998 DNIMNRDIPWP--------------------------------------------NIPEEMSVEACDLIDKLLTENPVQR 1033 (1170)
Q Consensus 998 qkIl~~~l~fP--------------------------------------------~ip~~lS~eakDLIkkLLq~DPskR 1033 (1170)
..+.......| ..+..++..+.+||.+||+.||.+|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 299 (328)
T cd08226 220 LQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKR 299 (328)
T ss_pred HHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccC
Confidence 44332211100 0112357789999999999999999
Q ss_pred CChhhHHHHHcCCCCCCC
Q 001057 1034 LGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1034 pSa~~AeEILqHPfF~~i 1051 (1170)
|+ +.++++||||..+
T Consensus 300 pt---a~e~l~~~~~~~~ 314 (328)
T cd08226 300 PS---ASSLLSHAFFKQV 314 (328)
T ss_pred CC---HHHHhhCHHHHHH
Confidence 99 8899999999764
No 281
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=9.4e-38 Score=332.48 Aligned_cols=252 Identities=26% Similarity=0.415 Sum_probs=209.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++.++||.|+||.||+|++..++ .||+|++.+... ..+.+.+|+.++..++||||+++++.+. ....|+
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~l 77 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYI 77 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEE
Confidence 3467999999999999999999987654 599999876432 2246788999999999999999998775 456899
Q ss_pred EEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~-- 155 (262)
T cd05071 78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-- 155 (262)
T ss_pred EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccc--
Confidence 99999999999999763 35889999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+..
T Consensus 156 ---------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~ 208 (262)
T cd05071 156 ---------------------------EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 208 (262)
T ss_pred ---------------------------ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 0001112346778999999988889999999999999999999 899999888
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
..+++..+.... ..+ .+..++..+.+||.+||+.||.+||++..+.++|+
T Consensus 209 ~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~ 258 (262)
T cd05071 209 NREVLDQVERGY-RMP-CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 258 (262)
T ss_pred hHHHHHHHhcCC-CCC-CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHH
Confidence 888777775543 222 23578899999999999999999999776666654
No 282
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=6.1e-38 Score=331.63 Aligned_cols=249 Identities=23% Similarity=0.428 Sum_probs=207.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++.+.||.|+||.||+|+++ ++..+|+|++.+... ....+.+|+.+++.++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 356999999999999999999886 466899999875432 124577899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++....
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~----- 152 (256)
T cd05059 78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLD----- 152 (256)
T ss_pred EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccc-----
Confidence 9999999999999764 4689999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ 994 (1170)
..........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..
T Consensus 153 ------------------------~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 208 (256)
T cd05059 153 ------------------------DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS 208 (256)
T ss_pred ------------------------ccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH
Confidence 00000111224567999999998899999999999999999998 89999988887
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+....+..... . ..+...+.++.+|+.+||+.+|.+||+ +.++++
T Consensus 209 ~~~~~~~~~~~-~-~~~~~~~~~~~~li~~cl~~~p~~Rpt---~~~~l~ 253 (256)
T cd05059 209 EVVESVSAGYR-L-YRPKLAPTEVYTIMYSCWHEKPEDRPA---FKKLLS 253 (256)
T ss_pred HHHHHHHcCCc-C-CCCCCCCHHHHHHHHHHhcCChhhCcC---HHHHHH
Confidence 77777765421 1 233568999999999999999999999 555553
No 283
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.7e-38 Score=350.52 Aligned_cols=255 Identities=32% Similarity=0.517 Sum_probs=208.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc------
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE------ 831 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~------ 831 (1170)
.+|.+.+.||.|+||.||+|++..+|+.||+|++.+... .......+.+|+.++..++||||++++++|....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 579999999999999999999999999999999876432 2233456789999999999999999999887543
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
.+|+||||+. .+|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~-- 168 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD-- 168 (342)
T ss_pred eEEEEecccc-cCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC--
Confidence 4699999995 47776653 368999999999999999999999999999999999999999999999999987410
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+
T Consensus 169 -------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~ 217 (342)
T cd07879 169 -------------------------------AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 217 (342)
T ss_pred -------------------------------CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCC
Confidence 01123467899999999876 4588899999999999999999999998
Q ss_pred CCHHHHHHHHhccC-----------------------CCCC-----CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 991 KTPQQIFDNIMNRD-----------------------IPWP-----NIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~-----------------------l~fP-----~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
.+....+..+.... ...+ ......+..+.+||.+||+.||.+||+ +.++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~---~~e~ 294 (342)
T cd07879 218 KDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLT---ATEA 294 (342)
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcC---HHHH
Confidence 87655554443210 0000 001246788999999999999999999 8899
Q ss_pred HcCCCCCCCC
Q 001057 1043 KQHPFFKNIN 1052 (1170)
Q Consensus 1043 LqHPfF~~id 1052 (1170)
+.||||..+.
T Consensus 295 l~h~~f~~~~ 304 (342)
T cd07879 295 LEHPYFDSFR 304 (342)
T ss_pred hcCcchhhcc
Confidence 9999998874
No 284
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.4e-37 Score=330.78 Aligned_cols=257 Identities=23% Similarity=0.333 Sum_probs=212.2
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGD---LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe---~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
..+|++.+.||.|+||.||+|+++.++. .||+|.+.... .......+.+|+.++..++||||+++++++...+.+
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 4679999999999999999999865543 79999886532 233456788999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
|+||||+++++|.+++... +.++...+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 9999999999999999765 468999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
..........++..|+|||++.+..++.++|+|||||++|+|++ |..||.+.
T Consensus 161 ---------------------------~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~ 213 (267)
T cd05066 161 ---------------------------EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEM 213 (267)
T ss_pred ---------------------------ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccC
Confidence 00001111234568999999998889999999999999999886 99999988
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+..+....+.... ..+ .+..++..+.+|+.+||+.+|.+||++.++.++|.
T Consensus 214 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 264 (267)
T cd05066 214 SNQDVIKAIEEGY-RLP-APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILD 264 (267)
T ss_pred CHHHHHHHHhCCC-cCC-CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHH
Confidence 8777777776542 222 23567899999999999999999999766655543
No 285
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.5e-37 Score=341.29 Aligned_cols=255 Identities=28% Similarity=0.429 Sum_probs=215.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|..+++||.|+||+||+|++..+++.||+|++.............+.+|+.+++.++||||+++++++.+....|+|||
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 37778889999999999999999999999999876554445556778899999999999999999999999999999999
Q ss_pred eccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|+. |+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 102 ~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------- 172 (313)
T cd06633 102 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------- 172 (313)
T ss_pred cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC--------
Confidence 995 578887765 4568999999999999999999999999999999999999999999999999875310
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
......|+..|+|||++. ...++.++|||||||++|+|++|.+||...+..
T Consensus 173 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~ 226 (313)
T cd06633 173 --------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 226 (313)
T ss_pred --------------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 112356889999999985 345788999999999999999999999887766
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
.....+.....+.. ....++..+++||.+||+.+|.+||+ +.+++.||||+...
T Consensus 227 ~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~P~~Rp~---~~~~l~~~~~~~~~ 280 (313)
T cd06633 227 SALYHIAQNDSPTL-QSNEWTDSFRGFVDYCLQKIPQERPA---SAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHHHhcCCCCC-CccccCHHHHHHHHHHccCChhhCcC---HHHHhcCcccCCCc
Confidence 65555544332211 12356788999999999999999999 88999999998754
No 286
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.1e-38 Score=359.73 Aligned_cols=259 Identities=23% Similarity=0.345 Sum_probs=210.1
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCC-----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRAT-----GDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFT 828 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~T-----Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fq 828 (1170)
...++|++++.||.|+||.||+|.+... +..||||++.... .....+.+.+|+.+|..+. |||||+++++|.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~ 111 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACT 111 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc
Confidence 3456899999999999999999987433 3579999986542 3344578899999999996 999999999999
Q ss_pred cccceEEEEeeccCCChHHHHHhc--------------------------------------------------------
Q 001057 829 CRENLYLVMEYLNGGDLYSLLRNL-------------------------------------------------------- 852 (1170)
Q Consensus 829 d~~~LyLVMEY~~GGSL~dlLk~~-------------------------------------------------------- 852 (1170)
....+|||||||++|+|.++|...
T Consensus 112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (400)
T cd05105 112 KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPM 191 (400)
T ss_pred cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchh
Confidence 999999999999999999988642
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeC
Q 001057 853 ----------------------------------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIG 892 (1170)
Q Consensus 853 ----------------------------------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd 892 (1170)
..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~ 271 (400)
T cd05105 192 LEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe
Confidence 1367788889999999999999999999999999999999
Q ss_pred CCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhh
Q 001057 893 QDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWW 972 (1170)
Q Consensus 893 ~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIW 972 (1170)
.++.+||+|||+++..... ..........+++.|+|||++.+..++.++|||
T Consensus 272 ~~~~~kL~DfGla~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 323 (400)
T cd05105 272 QGKIVKICDFGLARDIMHD----------------------------SNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVW 323 (400)
T ss_pred CCCEEEEEeCCcceecccc----------------------------ccccccCCcCCCcceEChhhhcCCCCCchhhHH
Confidence 9999999999998752100 000112234578899999999998899999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 973 SVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 973 SLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
||||++|||++ |..||........+.........+ ..+..++.++.+||.+||+.||.+||++.++.+++.
T Consensus 324 SlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~ 395 (400)
T cd05105 324 SYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM-AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVE 395 (400)
T ss_pred HHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHH
Confidence 99999999997 999998765444333333333222 234678999999999999999999999777766664
No 287
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.8e-37 Score=326.82 Aligned_cols=247 Identities=27% Similarity=0.442 Sum_probs=210.7
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|++.+.||.|+||.||+|... |+.||+|.+..... ..+++.+|+.++..++|+||+++++++.+....|+
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 77 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI 77 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence 4568999999999999999999864 88999999876432 45778999999999999999999999999899999
Q ss_pred EEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++...
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~---- 153 (256)
T cd05039 78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS---- 153 (256)
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccc----
Confidence 999999999999998765 69999999999999999999999999999999999999999999999999987421
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
. ......++..|+|||++.+..++.++|||||||++|+|++ |..||...+
T Consensus 154 --------------------------~---~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 204 (256)
T cd05039 154 --------------------------Q---GQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred --------------------------c---ccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 0 0001234567999999988889999999999999999997 999999888
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..++...+..... +..+..+++.+.+||.+||..+|.+||++.++.+.|
T Consensus 205 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 253 (256)
T cd05039 205 LKDVVPHVEKGYR--MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQL 253 (256)
T ss_pred HHHHHHHHhcCCC--CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHH
Confidence 8777766654322 233467899999999999999999999965555444
No 288
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=6.1e-38 Score=345.85 Aligned_cols=274 Identities=28% Similarity=0.424 Sum_probs=215.4
Q ss_pred CCeEE-EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHH-----------HHHHHHHHHHHHHhcCCCcEEEEEe
Q 001057 758 EDFEI-IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKN-----------AVESILAERNILISVRNPFVVRFFY 825 (1170)
Q Consensus 758 edYev-lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~-----------~ve~~l~EieILskL~HPNIVrL~~ 825 (1170)
++|.. .+.||.|+||+||+|.++.+++.||||++......... ....+.+|+.++..++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 46764 46799999999999999999999999998764322210 0124678999999999999999999
Q ss_pred eeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 826 SFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 826 ~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
+|...+.+|+||||+. |+|.+++.....+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccce
Confidence 9999999999999996 699999988788999999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG 984 (1170)
........... ..... ............+++.|+|||++.+. .++.++|||||||++|+|++|
T Consensus 167 ~~~~~~~~~~~---------------~~~~~-~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 167 RRYGYPPYSDT---------------LSKDE-TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred eeccccccccc---------------ccccc-cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 75321100000 00000 00011122234578999999999764 468899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccC-----CCCC--------------------CCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 985 IPPFNAKTPQQIFDNIMNRD-----IPWP--------------------NIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~-----l~fP--------------------~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.+||.+.+..+.+..+.... ..|+ ......+.++.+||.+||+.+|.+||+ +
T Consensus 231 ~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s---~ 307 (335)
T PTZ00024 231 KPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERIS---A 307 (335)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccC---H
Confidence 99999888776665554310 0011 011245788999999999999999999 8
Q ss_pred HHHHcCCCCCCC
Q 001057 1040 REVKQHPFFKNI 1051 (1170)
Q Consensus 1040 eEILqHPfF~~i 1051 (1170)
.+++.||||+..
T Consensus 308 ~~~l~~~~~~~~ 319 (335)
T PTZ00024 308 KEALKHEYFKSD 319 (335)
T ss_pred HHHhcCcccCCC
Confidence 899999999864
No 289
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.3e-37 Score=329.25 Aligned_cols=252 Identities=24% Similarity=0.349 Sum_probs=207.2
Q ss_pred EeccCCCeEEEEeeec--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 765 PISQGAFGRVFLARKR--ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk--~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
.||.|+||.||+|... .++..||+|++.... .....+.+.+|+.+++.++||||+++++++. ...+|+||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 4899999999999765 456679999886542 3445567899999999999999999999876 4578999999999
Q ss_pred CChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCC
Q 001057 843 GDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSL 921 (1170)
Q Consensus 843 GSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl 921 (1170)
|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 79 ~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--------- 149 (257)
T cd05115 79 GPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADD--------- 149 (257)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCc---------
Confidence 999999975 4578999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 001057 922 GSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDNI 1000 (1170)
Q Consensus 922 ~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qkI 1000 (1170)
..........+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+....+
T Consensus 150 ------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 211 (257)
T cd05115 150 ------------------SYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI 211 (257)
T ss_pred ------------------cceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence 00000111234678999999988889999999999999999996 99999988887777766
Q ss_pred hccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 1001 MNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 1001 l~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
..+.. +..+...+.++.+||.+||..||.+||++.++.+.++.-||
T Consensus 212 ~~~~~--~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~~ 257 (257)
T cd05115 212 EQGKR--LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYYY 257 (257)
T ss_pred HCCCC--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhcC
Confidence 65442 23446789999999999999999999998878777776654
No 290
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.2e-37 Score=347.28 Aligned_cols=256 Identities=30% Similarity=0.458 Sum_probs=209.7
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR------ 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~------ 830 (1170)
.++|.+++.||+|+||.||+|.+..+++.||+|++.+... .....+.+.+|+.++.+++||||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 4789999999999999999999999999999999876422 223346678899999999999999999887643
Q ss_pred cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
..+|++++++ |++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~- 171 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD- 171 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc-
Confidence 3478899987 7899888765 469999999999999999999999999999999999999999999999999986410
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.......||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.
T Consensus 172 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 172 --------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred --------------------------------ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 01123468899999999876 468889999999999999999999998
Q ss_pred CCCHHHHHHHHhccCC----------------------------CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 990 AKTPQQIFDNIMNRDI----------------------------PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l----------------------------~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
+.+....+..+..... .+.......++++.+||.+||+.||.+|++ +.+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t---~~e 296 (345)
T cd07877 220 GTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT---AAQ 296 (345)
T ss_pred CCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCC---HHH
Confidence 7766554443322110 011111246888999999999999999999 789
Q ss_pred HHcCCCCCCC
Q 001057 1042 VKQHPFFKNI 1051 (1170)
Q Consensus 1042 ILqHPfF~~i 1051 (1170)
++.||||++.
T Consensus 297 ~l~h~~f~~~ 306 (345)
T cd07877 297 ALAHAYFAQY 306 (345)
T ss_pred HhcChhhhhc
Confidence 9999999864
No 291
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.1e-37 Score=344.40 Aligned_cols=261 Identities=31% Similarity=0.460 Sum_probs=209.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCC--CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec----cc
Q 001057 759 DFEIIKPISQGAFGRVFLARKRAT--GDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTC----RE 831 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~T--Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd----~~ 831 (1170)
+|++.+.||.|+||.||+|++..+ +..||+|++.... ........+.+|+.++..+ +||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 589999999999999999999888 8999999986432 2223356678899999999 59999999986432 24
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
.+|++|+|+. ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 5889999985 699999988888999999999999999999999999999999999999999999999999999753100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.. ..........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+
T Consensus 159 ~~--------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 159 PG--------------------------ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred cc--------------------------cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 00 00111234578999999998876 4689999999999999999999999987
Q ss_pred CCHHHHHHHHhcc----------------------------CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 991 KTPQQIFDNIMNR----------------------------DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 991 ~~~~ei~qkIl~~----------------------------~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
.+....+..++.. ...++......+..+.+||.+||+.||.+||+ +.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t---~~~l 289 (332)
T cd07857 213 KDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRIS---VEEA 289 (332)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCC---HHHH
Confidence 7654444333221 01111122346889999999999999999999 8899
Q ss_pred HcCCCCCC
Q 001057 1043 KQHPFFKN 1050 (1170)
Q Consensus 1043 LqHPfF~~ 1050 (1170)
+.||||+.
T Consensus 290 l~~~~~~~ 297 (332)
T cd07857 290 LEHPYLAI 297 (332)
T ss_pred hcChhhhh
Confidence 99999964
No 292
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.5e-37 Score=341.35 Aligned_cols=255 Identities=29% Similarity=0.439 Sum_probs=217.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
..|...+.||.|+||.||++++..++..||+|++.+...........+.+|+.+++.++|||++++++++.+....|+||
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 104 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVM 104 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEE
Confidence 34889999999999999999999999999999987654444455678889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+. |+|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++....
T Consensus 105 e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~------- 176 (317)
T cd06635 105 EYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS------- 176 (317)
T ss_pred eCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC-------
Confidence 9996 478777754 4568999999999999999999999999999999999999999999999999876310
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
......|++.|+|||++. ...++.++|||||||++|+|++|.+||...+.
T Consensus 177 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~ 229 (317)
T cd06635 177 ---------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 229 (317)
T ss_pred ---------------------------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH
Confidence 012346889999999985 34578899999999999999999999988877
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
......+........ ....++..+++||.+||+.+|.+||+ +.++++|+|+...
T Consensus 230 ~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rpt---~~~il~~~~~~~~ 283 (317)
T cd06635 230 MSALYHIAQNESPTL-QSNEWSDYFRNFVDSCLQKIPQDRPT---SEELLKHMFVLRE 283 (317)
T ss_pred HHHHHHHHhccCCCC-CCccccHHHHHHHHHHccCCcccCcC---HHHHHhChhhhcc
Confidence 766666655443322 13467889999999999999999999 8899999998543
No 293
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-37 Score=337.58 Aligned_cols=257 Identities=22% Similarity=0.342 Sum_probs=207.9
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCC--------------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATG--------------DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVR 822 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TG--------------e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVr 822 (1170)
.++|++.+.||+|+||.||+|++..++ ..||+|.+.... .......+.+|+++|..++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 468999999999999999999875432 359999987532 3345567899999999999999999
Q ss_pred EEeeeecccceEEEEeeccCCChHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEE
Q 001057 823 FFYSFTCRENLYLVMEYLNGGDLYSLLRNLG------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLL 890 (1170)
Q Consensus 823 L~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENIL 890 (1170)
+++++.....+|+||||+.+++|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999999999986532 3678888999999999999999999999999999999
Q ss_pred eCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchh
Q 001057 891 IGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATAD 970 (1170)
Q Consensus 891 Ld~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 970 (1170)
++.++.+||+|||++...... ..........+++.|+|||++.+..++.++|
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 213 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSG----------------------------DYYRIQGRAVLPIRWMAWESILLGKFTTASD 213 (295)
T ss_pred EcCCCcEEecccccccccccC----------------------------cceeccCcCcCceeecChhhhccCCcCchhh
Confidence 999999999999998742100 0001112334578899999999888999999
Q ss_pred hhHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhc-----cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 971 WWSVGIILFELLI--GIPPFNAKTPQQIFDNIMN-----RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 971 IWSLGVILYELLT--G~pPF~g~~~~ei~qkIl~-----~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
||||||++|+|++ |..||...+..+....+.. ....+...+..++..+.+||.+||+.||.+||++..+.+.|
T Consensus 214 vwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l 293 (295)
T cd05097 214 VWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFL 293 (295)
T ss_pred HHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence 9999999999988 7789988777666655432 12222223456789999999999999999999966555444
No 294
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.9e-37 Score=328.07 Aligned_cols=251 Identities=26% Similarity=0.417 Sum_probs=208.5
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|+++++||.|+||.||+|..+ +++.||+|.+..... ....+.+|+.+++.++||||+++++++. .+.+|+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 77 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYI 77 (260)
T ss_pred chHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEE
Confidence 4568999999999999999999865 577899999875432 2356888999999999999999998764 567899
Q ss_pred EEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+.+++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~-- 155 (260)
T cd05067 78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN-- 155 (260)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC--
Confidence 99999999999998753 35899999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus 156 ---------------------------~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 208 (260)
T cd05067 156 ---------------------------EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT 208 (260)
T ss_pred ---------------------------CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC
Confidence 0001112345778999999998889999999999999999998 999999888
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..+....+.... .. ..+...+.++.+||.+||+.+|.+||++..+..+|
T Consensus 209 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 257 (260)
T cd05067 209 NPEVIQNLERGY-RM-PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVL 257 (260)
T ss_pred hHHHHHHHHcCC-CC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHh
Confidence 877777665432 21 24467889999999999999999999966665554
No 295
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.4e-38 Score=349.36 Aligned_cols=256 Identities=30% Similarity=0.478 Sum_probs=213.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc----
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN---- 832 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~---- 832 (1170)
.++|++.+.||.|+||.||+|++..+++.||+|++.... ........+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 467999999999999999999999999999999886542 223345667889999999999999999988876554
Q ss_pred --eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 833 --LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 833 --LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
+|+||||+ |++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~- 169 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD- 169 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc-
Confidence 89999999 6799998876 569999999999999999999999999999999999999999999999999987421
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
.......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 170 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 170 --------------------------------DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred --------------------------------ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 01123467889999999875 367889999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCC----------------------------CCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 990 AKTPQQIFDNIMNRDIP----------------------------WPNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~----------------------------fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
+.+..+.+..+...... +......++..+.+||.+||+.||.+||+ +.+
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt---~~e 294 (343)
T cd07851 218 GSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRIT---AAE 294 (343)
T ss_pred CCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCC---HHH
Confidence 88776666655432110 00111246889999999999999999999 889
Q ss_pred HHcCCCCCCC
Q 001057 1042 VKQHPFFKNI 1051 (1170)
Q Consensus 1042 ILqHPfF~~i 1051 (1170)
+++||||+..
T Consensus 295 ll~h~~~~~~ 304 (343)
T cd07851 295 ALAHPYLAEY 304 (343)
T ss_pred HhcCCCcccc
Confidence 9999999864
No 296
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.6e-37 Score=325.83 Aligned_cols=254 Identities=25% Similarity=0.377 Sum_probs=212.3
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
+..++|++.+.||.|+||.||+|.+. .+..||||.+..... ....+.+|+.+++.++||||+++++++.....+|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 34578999999999999999999975 457899999875432 2356888999999999999999999999889999
Q ss_pred EEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+||||+++++|.+++... ..++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~- 156 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD- 156 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch-
Confidence 999999999999999764 36899999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
.........++..|+|||.+.+..++.++|+|||||++|+|++ |+.||.+.
T Consensus 157 ----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~ 208 (261)
T cd05034 157 ----------------------------EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGM 208 (261)
T ss_pred ----------------------------hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0000112234578999999998889999999999999999998 99999988
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+....++.+.... .. ..+...+.++.++|.+||+.+|.+||++..+.++++
T Consensus 209 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~ 259 (261)
T cd05034 209 TNREVLEQVERGY-RM-PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259 (261)
T ss_pred CHHHHHHHHHcCC-CC-CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHh
Confidence 8888777776532 21 223567899999999999999999999666665554
No 297
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-37 Score=338.65 Aligned_cols=257 Identities=23% Similarity=0.357 Sum_probs=211.2
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRA-------TGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYS 826 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~-------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~ 826 (1170)
...++|.+.+.||+|+||.||+|++.. ....||+|++.... .......+..|+.++..+ +||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 344689999999999999999998632 34579999987532 234566788999999999 59999999999
Q ss_pred eecccceEEEEeeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEE
Q 001057 827 FTCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLL 890 (1170)
Q Consensus 827 Fqd~~~LyLVMEY~~GGSL~dlLk~~----------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENIL 890 (1170)
+.+...+|+||||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 99999999999999999999999753 24788889999999999999999999999999999999
Q ss_pred eCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchh
Q 001057 891 IGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATAD 970 (1170)
Q Consensus 891 Ld~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 970 (1170)
++.++.+||+|||+++...... .........+++.|||||++.+..++.++|
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDID----------------------------YYKKTSNGRLPVKWMAPEALFDRVYTHQSD 218 (314)
T ss_pred EcCCCcEEEccccccccccccc----------------------------cccccccCCCCccccCHHHHccCCcCccch
Confidence 9999999999999997421000 000011123456899999999888999999
Q ss_pred hhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 971 WWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 971 IWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
||||||++|+|++ |..||.+.+..+.+..+..... +..+..++.++++||.+||..||.+||++.++.+.+
T Consensus 219 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l 290 (314)
T cd05099 219 VWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEAL 290 (314)
T ss_pred hhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence 9999999999999 9999999888888887766542 223467889999999999999999999965554444
No 298
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.1e-38 Score=350.54 Aligned_cols=255 Identities=25% Similarity=0.391 Sum_probs=203.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeec-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKR-----ATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCR 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk-----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~ 830 (1170)
.++|++.+.||.|+||.||+|+.. .+++.||+|++.... .....+.+..|+.++.++ +||||+++++++...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 357999999999999999999754 345899999986532 233456778899999999 799999999987654
Q ss_pred -cceEEEEeeccCCChHHHHHhc---------------------------------------------------------
Q 001057 831 -ENLYLVMEYLNGGDLYSLLRNL--------------------------------------------------------- 852 (1170)
Q Consensus 831 -~~LyLVMEY~~GGSL~dlLk~~--------------------------------------------------------- 852 (1170)
..+|++|||+++|+|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 5789999999999999998542
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccc
Q 001057 853 ----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLV 928 (1170)
Q Consensus 853 ----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~ 928 (1170)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~----------------- 226 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD----------------- 226 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccC-----------------
Confidence 25788999999999999999999999999999999999999999999999999753100
Q ss_pred cccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCC
Q 001057 929 NDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPW 1007 (1170)
Q Consensus 929 ~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~f 1007 (1170)
..........++..|+|||++.+..++.++|||||||++|||++ |..||.+....+.+.........
T Consensus 227 -----------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~- 294 (337)
T cd05054 227 -----------PDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR- 294 (337)
T ss_pred -----------cchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC-
Confidence 00011223456778999999999999999999999999999997 99999876544443333332222
Q ss_pred CCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 1008 PNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 1008 P~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
+..+...+.++.+++.+||+.+|.+||+ +.++++|
T Consensus 295 ~~~~~~~~~~~~~l~~~cl~~~p~~RPs---~~ell~~ 329 (337)
T cd05054 295 MRAPEYATPEIYSIMLDCWHNNPEDRPT---FSELVEI 329 (337)
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcC---HHHHHHH
Confidence 2234678899999999999999999999 4455543
No 299
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=7.3e-38 Score=330.53 Aligned_cols=254 Identities=27% Similarity=0.500 Sum_probs=214.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI--RKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~--~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+|.+.+.||.|+||.||++++..++..+++|+++..... .......+..|+.++..++||||+++++++.+...+|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 589999999999999999999888887888877643321 223344567899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 837 MEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
|||+++++|..++.. ...+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~-- 157 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMG-- 157 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCC--
Confidence 999999999998864 346899999999999999999999999999999999999974 6799999999875210
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.........|++.|+|||.+.+..++.++|+||||+++|+|++|..||.+..
T Consensus 158 ----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~ 209 (260)
T cd08222 158 ----------------------------SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN 209 (260)
T ss_pred ----------------------------CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 0011223468899999999988888999999999999999999999998877
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.......+..+.. +..+..++.++.++|.+||..||.+||+ +.++++||||
T Consensus 210 ~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~~il~~~~~ 260 (260)
T cd08222 210 FLSVVLRIVEGPT--PSLPETYSRQLNSIMQSMLNKDPSLRPS---AAEILRNPFI 260 (260)
T ss_pred HHHHHHHHHcCCC--CCCcchhcHHHHHHHHHHhcCChhhCcC---HHHHhhCCCC
Confidence 7777666655433 3445678999999999999999999999 8899999997
No 300
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-37 Score=338.27 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=208.3
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRA-------TGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYS 826 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~-------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~ 826 (1170)
+..++|.+.+.||+|+||.||+|++.. +...||+|.+.... .......+..|+.++..+ +||||++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 334789999999999999999998643 23579999987542 234456788899999999 79999999999
Q ss_pred eecccceEEEEeeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEE
Q 001057 827 FTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLL 890 (1170)
Q Consensus 827 Fqd~~~LyLVMEY~~GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENIL 890 (1170)
+...+.+|+||||+++|+|.+++.... .++...+..++.||+.||+|||++||+||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 999999999999999999999997642 4788889999999999999999999999999999999
Q ss_pred eCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchh
Q 001057 891 IGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATAD 970 (1170)
Q Consensus 891 Ld~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 970 (1170)
++.++.+||+|||+++...... .........+++.|+|||++.+..++.++|
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 224 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHID----------------------------YYKKTTNGRLPVKWMAPEALFDRIYTHQSD 224 (307)
T ss_pred EcCCCcEEECCCcccccccccc----------------------------hhhccccCCCccceeChHHhccCCCCcHHH
Confidence 9999999999999987421000 000011123457899999999888999999
Q ss_pred hhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 971 WWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 971 IWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
||||||++|+|++ |..||.+.+..+++..+..... +..+..++.++.+||.+||..+|.+||++.++
T Consensus 225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ev 292 (307)
T cd05098 225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 292 (307)
T ss_pred HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 9999999999998 9999998888777777655432 23446789999999999999999999995444
No 301
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.4e-37 Score=384.26 Aligned_cols=266 Identities=26% Similarity=0.405 Sum_probs=208.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
+++|+++++||+|+||.||+|++..+|+.||||++...........+.+.+|+.++..++||||+++++++.+.+..|+|
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 36899999999999999999999999999999998765433445567889999999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 837 MEYLNGGDLYSLLRNL-----------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-----------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
|||++||+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||+|
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999998642 23455667889999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGI 985 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~ 985 (1170)
+....... ..........+ ............+||+.|||||++.+..++.++|||||||++|||++|.
T Consensus 161 k~i~~~~~-~~~~l~~~~~~-----------s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 161 IFKKLEEE-DLLDIDVDERN-----------ICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred eecccccc-ccccccccccc-----------ccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCC
Confidence 85311000 00000000000 0001111223468999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHH-hccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCC
Q 001057 986 PPFNAKTPQQIFDNI-MNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLG 1035 (1170)
Q Consensus 986 pPF~g~~~~ei~qkI-l~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpS 1035 (1170)
+||.+.+...+.... ........ ....+++.+.+++.+||+.||.+|++
T Consensus 229 ~PF~~~~~~ki~~~~~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~s 278 (932)
T PRK13184 229 FPYRRKKGRKISYRDVILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYS 278 (932)
T ss_pred CCCCCcchhhhhhhhhccChhhcc-ccccCCHHHHHHHHHHccCChhhCcC
Confidence 999876654433221 11111111 11367899999999999999999988
No 302
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.2e-37 Score=330.90 Aligned_cols=255 Identities=35% Similarity=0.600 Sum_probs=210.9
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cceEEEE
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--ENLYLVM 837 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~LyLVM 837 (1170)
|++++.||.|+||.||+|.+..+++.||+|++.... ........+.+|+.++..++||||+++++++.+. ..+|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 788999999999999999999999999999998753 2334456788899999999999999999999988 8899999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||++ ++|..++... ..+++..+..++.||+.||.|||++|++|+||||+|||++.++.++|+|||++.......
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~---- 154 (287)
T cd07840 80 EYMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN---- 154 (287)
T ss_pred cccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC----
Confidence 9996 5899988765 579999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
........++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+...
T Consensus 155 -------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~ 209 (287)
T cd07840 155 -------------------------SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE 209 (287)
T ss_pred -------------------------cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 001122356889999998765 457899999999999999999999999888766
Q ss_pred HHHHHhccC-----CCCCC-----------------------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 996 IFDNIMNRD-----IPWPN-----------------------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 996 i~qkIl~~~-----l~fP~-----------------------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
.+..+.... ..|+. +...++..+.++|.+||+.||.+||+ +.+++.|||
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~---~~~~l~~~~ 286 (287)
T cd07840 210 QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRIS---ADQALQHEY 286 (287)
T ss_pred HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcC---HHHHhhCcC
Confidence 665554311 00110 00113889999999999999999999 889999999
Q ss_pred C
Q 001057 1048 F 1048 (1170)
Q Consensus 1048 F 1048 (1170)
|
T Consensus 287 ~ 287 (287)
T cd07840 287 F 287 (287)
T ss_pred C
Confidence 8
No 303
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-37 Score=346.82 Aligned_cols=259 Identities=30% Similarity=0.485 Sum_probs=208.4
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-------
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR------- 830 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~------- 830 (1170)
.+|++.+.||.|+||.||+|.+..+|+.||+|++..... ...+.+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 689999999999999999999999999999999865432 4456788999999999999999999776553
Q ss_pred -------cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEec
Q 001057 831 -------ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDF 902 (1170)
Q Consensus 831 -------~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDF 902 (1170)
..+|+||||+. ++|..++.. +.+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 35799999996 589888864 46899999999999999999999999999999999999975 557899999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFEL 981 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYEL 981 (1170)
|++....... ..........|+..|+|||++.+ ..++.++|||||||++|+|
T Consensus 160 g~~~~~~~~~---------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 160 GLARIVDPHY---------------------------SHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred ccceecCCcc---------------------------ccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 9987421000 00001112357899999998765 5678899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHhccC-------------------------C--CCCCCCccCCHHHHHHHHHhccCCCCCCC
Q 001057 982 LIGIPPFNAKTPQQIFDNIMNRD-------------------------I--PWPNIPEEMSVEACDLIDKLLTENPVQRL 1034 (1170)
Q Consensus 982 LTG~pPF~g~~~~ei~qkIl~~~-------------------------l--~fP~ip~~lS~eakDLIkkLLq~DPskRp 1034 (1170)
++|..||.+.+..+....+.... . ++......++.++.+||.+||+.||.+||
T Consensus 213 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 292 (342)
T cd07854 213 LTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRL 292 (342)
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhcc
Confidence 99999998877655554443210 0 00011135788999999999999999999
Q ss_pred ChhhHHHHHcCCCCCCC
Q 001057 1035 GATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1035 Sa~~AeEILqHPfF~~i 1051 (1170)
+ +.+++.||||+.+
T Consensus 293 t---~~ell~h~~~~~~ 306 (342)
T cd07854 293 T---AEEALMHPYMSCY 306 (342)
T ss_pred C---HHHHhCCCccccc
Confidence 9 8899999999865
No 304
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.8e-37 Score=338.94 Aligned_cols=258 Identities=23% Similarity=0.365 Sum_probs=211.0
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeee-----cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeee
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARK-----RATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSF 827 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArd-----k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~F 827 (1170)
....++|.+.+.||+|+||.||+|.+ ..++..||+|++++.. .....+.+.+|+.+++++ +||||+++++++
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 45567899999999999999999975 3456689999987543 234557789999999999 799999999999
Q ss_pred ecccceEEEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 828 TCRENLYLVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 828 qd~~~LyLVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
...+.+|+||||+.+|+|.+++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999999997643 3899999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-C
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-G 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G 984 (1170)
+...... .........+++.|+|||++.+..++.++|||||||++|+|++ |
T Consensus 189 ~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g 240 (302)
T cd05055 189 RDIMNDS----------------------------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 240 (302)
T ss_pred ccccCCC----------------------------ceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCC
Confidence 7421000 0001122346789999999998889999999999999999998 9
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
.+||.+......+.......... ..+...+.++.+||.+||..+|.+||++.++.+.
T Consensus 241 ~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 241 SNPYPGMPVDSKFYKLIKEGYRM-AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CCCcCCCCchHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 99998877665554444333322 2345678999999999999999999995544333
No 305
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=8.6e-38 Score=331.96 Aligned_cols=254 Identities=33% Similarity=0.582 Sum_probs=211.3
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|++.+.||.|++|.||+|.+..+++.+|+|.+..... .......+.+|+.+|+.++||||+++++++.+...+|+||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999999999999999876532 223456788899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 840 LNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 840 ~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
+.+ +|..++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~-------- 150 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGS-------- 150 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCC--------
Confidence 965 888888764 5799999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.........++..|+|||.+.+. .++.++|+|||||++|+|++|++||.+.+..+.+
T Consensus 151 ----------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~ 208 (283)
T cd05118 151 ----------------------PVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQL 208 (283)
T ss_pred ----------------------CcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 00011224578899999999876 7899999999999999999999999887766555
Q ss_pred HHHhccC-------------------CCCC--------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 998 DNIMNRD-------------------IPWP--------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 998 qkIl~~~-------------------l~fP--------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
..+...- ..++ .....++.++.+||.+||+.||.+||+ +.+++.||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~---~~~ll~~~~~ 283 (283)
T cd05118 209 FKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRIT---AEQALAHPYF 283 (283)
T ss_pred HHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcC---HHHHhhCCCC
Confidence 4443210 0000 111246889999999999999999999 8899999997
No 306
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.9e-37 Score=332.82 Aligned_cols=253 Identities=24% Similarity=0.402 Sum_probs=207.9
Q ss_pred CeEEEEEeccCCCeEEEEeeecC-----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 759 DFEIIKPISQGAFGRVFLARKRA-----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~-----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
+|++.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.++..++||||+++++.|...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 58899999999999999998753 33579999886543 233456788999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcE
Q 001057 834 YLVMEYLNGGDLYSLLRNL------------------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNL 889 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~------------------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENI 889 (1170)
|+||||+.+|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 9999999999999998642 2477888999999999999999999999999999999
Q ss_pred EeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcch
Q 001057 890 LIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATA 969 (1170)
Q Consensus 890 LLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 969 (1170)
|++.++.+||+|||+++...... .........++..|+|||++.+..++.++
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~ 210 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEED----------------------------SYVKRSKGRIPVKWMAIESLFDHIYTTQS 210 (290)
T ss_pred EEcCCCcEEeccccccccccCcc----------------------------chhcccCCCCCccccCHHHHccCCcchHh
Confidence 99999999999999987421000 00011123456789999999888899999
Q ss_pred hhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 970 DWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 970 DIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
|||||||++|+|++ |..||.+..+..+.+.+... ..+ ..+..++.++.+||.+||+.||.+||++.++.+.|
T Consensus 211 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l 283 (290)
T cd05045 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG-YRM-ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKEL 283 (290)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCC-CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 99999999999998 99999998888877766543 222 23467899999999999999999999965554443
No 307
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.7e-37 Score=326.37 Aligned_cols=251 Identities=25% Similarity=0.394 Sum_probs=207.0
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.++|++...||.|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++||||+++++++. ....|+|
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 78 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV 78 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence 46799999999999999999988655 4599998765432 2356788999999999999999998875 4568999
Q ss_pred EeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 837 MEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|||+.+|+|.+++... ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~--- 155 (260)
T cd05069 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDN--- 155 (260)
T ss_pred EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCC---
Confidence 9999999999999764 34789999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~ 993 (1170)
.........++..|+|||++.+..++.++|||||||++|+|++ |.+||.+...
T Consensus 156 --------------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 209 (260)
T cd05069 156 --------------------------EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN 209 (260)
T ss_pred --------------------------cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 0001112345778999999988889999999999999999999 9999999888
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+....+.... .. ..+..++..+.+||.+||..||.+||++..+.+.|+
T Consensus 210 ~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 210 REVLEQVERGY-RM-PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred HHHHHHHHcCC-CC-CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 87777766542 22 234678999999999999999999999666655543
No 308
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=8.9e-38 Score=340.32 Aligned_cols=255 Identities=30% Similarity=0.545 Sum_probs=214.0
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|+...+||.|+||.||++..+.+++.||||.+... .......+.+|+.+++.++||||+++++.|...+..|+||||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 33446799999999999999999999999987532 223456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCC
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAP 919 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~ 919 (1170)
+++++|.+++.. +.+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus 99 ~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~---------- 167 (292)
T cd06657 99 LEGGALTDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS---------- 167 (292)
T ss_pred CCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecc----------
Confidence 999999998754 468999999999999999999999999999999999999999999999999876421
Q ss_pred CCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 001057 920 SLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDN 999 (1170)
Q Consensus 920 sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qk 999 (1170)
..........|++.|+|||++.+..++.++|+||+||++|+|++|.+||.+.........
T Consensus 168 --------------------~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~ 227 (292)
T cd06657 168 --------------------KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM 227 (292)
T ss_pred --------------------cccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 000111235689999999999888889999999999999999999999998877666555
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+.............++..+.++|.+||+.||.+||+ +.+++.||||...
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~---~~~ll~~~~~~~~ 276 (292)
T cd06657 228 IRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRAT---AAELLKHPFLAKA 276 (292)
T ss_pred HHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcC---HHHHhcChHHhcc
Confidence 543222111122457899999999999999999999 8899999999865
No 309
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.5e-37 Score=335.03 Aligned_cols=260 Identities=32% Similarity=0.520 Sum_probs=210.1
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc---
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE--- 831 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~--- 831 (1170)
...++|++.+.||.|+||.||+|.++.+|+.||+|++..... .......+.+|+.++..++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 456789999999999999999999999999999999875432 2223356678999999999999999999887655
Q ss_pred -------ceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecC
Q 001057 832 -------NLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFG 903 (1170)
Q Consensus 832 -------~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFG 903 (1170)
.+|+||||+++ +|..++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 79999999975 777777654 469999999999999999999999999999999999999999999999999
Q ss_pred CccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHH
Q 001057 904 LSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELL 982 (1170)
Q Consensus 904 LAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELL 982 (1170)
++....... ........++..|+|||++.+. .++.++|||||||++|+|+
T Consensus 162 ~~~~~~~~~-----------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~ 212 (302)
T cd07864 162 LARLYNSEE-----------------------------SRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELF 212 (302)
T ss_pred ccccccCCc-----------------------------ccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHH
Confidence 987531000 0011123467889999998753 4788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHhcc---CC--CCCC----------------------CCccCCHHHHHHHHHhccCCCCCCCC
Q 001057 983 IGIPPFNAKTPQQIFDNIMNR---DI--PWPN----------------------IPEEMSVEACDLIDKLLTENPVQRLG 1035 (1170)
Q Consensus 983 TG~pPF~g~~~~ei~qkIl~~---~l--~fP~----------------------ip~~lS~eakDLIkkLLq~DPskRpS 1035 (1170)
+|++||...+..+.+..+... .. .+|. ....++..+.+||.+||+.||.+||+
T Consensus 213 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~ 292 (302)
T cd07864 213 TKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCT 292 (302)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCC
Confidence 999999887765555444331 10 0110 01246889999999999999999999
Q ss_pred hhhHHHHHcCCCC
Q 001057 1036 ATGAREVKQHPFF 1048 (1170)
Q Consensus 1036 a~~AeEILqHPfF 1048 (1170)
+.+++.||||
T Consensus 293 ---~~~il~~~~~ 302 (302)
T cd07864 293 ---AEEALNSPWL 302 (302)
T ss_pred ---HHHHhcCCCC
Confidence 8899999997
No 310
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.9e-37 Score=327.20 Aligned_cols=255 Identities=22% Similarity=0.334 Sum_probs=209.5
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCC---EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGD---LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe---~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
..+|++.+.||+|+||.||+|.++.+++ .||||++.+.. .......+..|+.++..++||||+++++++.....+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999887665 69999986532 344567889999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
|+||||+++|+|.+++... +.+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999999999764 568999999999999999999999999999999999999999999999999987421000
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
. . ..........++..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus 161 ~---------------------~----~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~ 215 (269)
T cd05065 161 S---------------------D----PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 215 (269)
T ss_pred c---------------------c----cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC
Confidence 0 0 00000011122467999999998889999999999999999886 99999988
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHH
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAR 1040 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~Ae 1040 (1170)
+.......+... ...| .+..++..+.+++.+||+.+|.+||++..+.
T Consensus 216 ~~~~~~~~i~~~-~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 262 (269)
T cd05065 216 SNQDVINAIEQD-YRLP-PPMDCPTALHQLMLDCWQKDRNARPKFGQIV 262 (269)
T ss_pred CHHHHHHHHHcC-CcCC-CcccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 887777777533 2222 2356789999999999999999999954443
No 311
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.2e-37 Score=335.21 Aligned_cols=261 Identities=30% Similarity=0.533 Sum_probs=210.9
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCREN 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~ 832 (1170)
....++|++.+.||.|+||.||+|.+..+++.||||.+.+... ......+..|+.++..+. ||||+++++++.+...
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 3556889999999999999999999999999999999876532 223455666777676665 9999999999999999
Q ss_pred eEEEEeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
+|+||||+. ++|..++.. ...+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++....
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~- 166 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV- 166 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc-
Confidence 999999984 578777765 3578999999999999999999997 599999999999999999999999999986421
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC----CCcchhhhHHHHHHHHHHhCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG----HGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~----ys~ksDIWSLGVILYELLTG~p 986 (1170)
. ........|++.|+|||++.+.. ++.++|||||||++|+|++|..
T Consensus 167 -~-----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 216 (296)
T cd06618 167 -D-----------------------------SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQF 216 (296)
T ss_pred -C-----------------------------CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCC
Confidence 0 00111235788999999997653 7889999999999999999999
Q ss_pred CCCCCCH-HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 987 PFNAKTP-QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 987 PF~g~~~-~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
||..... .+.+..+.............++.++.+||.+||..||.+||+ +.+++.||||...
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~---~~~il~~~~~~~~ 279 (296)
T cd06618 217 PYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPK---YRELLQHPFIRRY 279 (296)
T ss_pred CCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCC---HHHHhcChhhhcc
Confidence 9976433 344555554433221112357899999999999999999999 8899999999854
No 312
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-37 Score=330.81 Aligned_cols=254 Identities=33% Similarity=0.580 Sum_probs=211.8
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|++.+.||.|+||.||+|+...+++.||+|++.... ......+.+..|+.+++.++||||+++++++.+...+|+||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 678889999999999999999999999999988654 2233446678899999999999999999999999999999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 840 LNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 840 ~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
++ ++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~-------- 150 (282)
T cd07829 80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGI-------- 150 (282)
T ss_pred cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCC--------
Confidence 97 5999999876 5799999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQIF 997 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~ 997 (1170)
.........++..|+|||++.+. .++.++|+|||||++|||++|.+||.+.+....+
T Consensus 151 ----------------------~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~ 208 (282)
T cd07829 151 ----------------------PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQL 208 (282)
T ss_pred ----------------------CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 00011223467889999999876 7889999999999999999999999988766655
Q ss_pred HHHhcc------------------CCCCCCC--------CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 998 DNIMNR------------------DIPWPNI--------PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 998 qkIl~~------------------~l~fP~i--------p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
..+... ...++.. ...++..+.++|.+||..||.+||+ +.+++.||||
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~---~~~~l~~p~~ 282 (282)
T cd07829 209 FKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS---AKEALKHPYF 282 (282)
T ss_pred HHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC---HHHHhhCcCC
Confidence 544321 1111110 1135788999999999999999999 8899999998
No 313
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-39 Score=369.26 Aligned_cols=253 Identities=29% Similarity=0.444 Sum_probs=223.7
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|.-++.||.|+||.||-|++..+.+.||||.+.-+.......-+.++.|+..|.+++|||+|.+-++|--+...+||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 47778899999999999999999999999999987665555666789999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
||- |+-.+++.-+ +++.+.++..|+.+.+.||.|||+++.||||||..||||++.|.|||+|||.|...
T Consensus 107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~--------- 176 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIM--------- 176 (948)
T ss_pred HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhc---------
Confidence 995 5777777644 57999999999999999999999999999999999999999999999999998752
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc---CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG---MGHGATADWWSVGIILFELLIGIPPFNAKTPQ 994 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ 994 (1170)
...++++|||+|||||||+. +.|+-++||||||++..||...+||+..++.+
T Consensus 177 -------------------------~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM 231 (948)
T KOG0577|consen 177 -------------------------APANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM 231 (948)
T ss_pred -------------------------CchhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH
Confidence 13468999999999999974 46999999999999999999999999999988
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
..+.-|.....+... ...+|..++.|+..||++-|.+||+ .+++|.|+|...
T Consensus 232 SALYHIAQNesPtLq-s~eWS~~F~~Fvd~CLqKipqeRpt---se~ll~H~fv~R 283 (948)
T KOG0577|consen 232 SALYHIAQNESPTLQ-SNEWSDYFRNFVDSCLQKIPQERPT---SEELLKHRFVLR 283 (948)
T ss_pred HHHHHHHhcCCCCCC-CchhHHHHHHHHHHHHhhCcccCCc---HHHHhhcchhcc
Confidence 877777655543221 3578999999999999999999999 789999999864
No 314
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.5e-37 Score=324.21 Aligned_cols=249 Identities=24% Similarity=0.352 Sum_probs=206.5
Q ss_pred EEeccCCCeEEEEeeecC-CC--CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeec
Q 001057 764 KPISQGAFGRVFLARKRA-TG--DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYL 840 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~-TG--e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~ 840 (1170)
+.||.|+||.||+|.+.. .+ ..||||.+...... ...+.+.+|+.++++++||||+++++.+.. ..+++||||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 368999999999999865 33 36999998875432 566788999999999999999999999988 8899999999
Q ss_pred cCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 841 NGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 841 ~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~------ 151 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNE------ 151 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccc------
Confidence 9999999997754 68999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIF 997 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~ 997 (1170)
. .........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..++.
T Consensus 152 ------~---------------~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~ 210 (257)
T cd05040 152 ------D---------------HYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQIL 210 (257)
T ss_pred ------c---------------ceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 0 0001113457789999999998899999999999999999998 99999988888777
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..+......++ .+...+..+.+||.+||+.+|.+||++.++.+.|
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 211 KKIDKEGERLE-RPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred HHHHhcCCcCC-CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 77664333222 3456889999999999999999999955554443
No 315
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.8e-37 Score=321.43 Aligned_cols=249 Identities=28% Similarity=0.453 Sum_probs=211.3
Q ss_pred eEEEEEeccCCCeEEEEeeecCCC----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 760 FEIIKPISQGAFGRVFLARKRATG----DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TG----e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
+++.+.||.|+||.||+|++..++ ..||+|++..... ......+..|+.++..++|+||+++++++.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD--EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC--hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 456789999999999999998766 8999999865432 2256788999999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNLGC--LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~--LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
+|||+++++|.+++..... +++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD- 157 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc-
Confidence 9999999999999976544 9999999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
. . . .....+++.|+|||.+.+..++.++|+|||||++|+|++ |.+||.+.+
T Consensus 158 ------------~-----------~-~----~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~ 209 (258)
T smart00219 158 ------------Y-----------Y-K----KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS 209 (258)
T ss_pred ------------c-----------c-c----cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 0 0 0 001226789999999988889999999999999999998 899999988
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
...+++.+...... ..+...+.++.++|.+||..||.+||+ +.++++
T Consensus 210 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt---~~~ll~ 256 (258)
T smart00219 210 NEEVLEYLKKGYRL--PKPENCPPEIYKLMLQCWAEDPEDRPT---FSELVE 256 (258)
T ss_pred HHHHHHHHhcCCCC--CCCCcCCHHHHHHHHHHCcCChhhCcC---HHHHHh
Confidence 88888887765543 234568999999999999999999999 555553
No 316
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-37 Score=335.56 Aligned_cols=254 Identities=21% Similarity=0.363 Sum_probs=210.6
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeec-------CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEe
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKR-------ATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFY 825 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk-------~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~ 825 (1170)
.+...+|.+.+.||.|+||.||+|+.. .++..||+|.+.... .......+.+|+.++..+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 355678999999999999999999753 234589999886532 234557788999999999 7999999999
Q ss_pred eeecccceEEEEeeccCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcE
Q 001057 826 SFTCRENLYLVMEYLNGGDLYSLLRNL----------------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNL 889 (1170)
Q Consensus 826 ~Fqd~~~LyLVMEY~~GGSL~dlLk~~----------------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENI 889 (1170)
++.....+|+||||+++|+|.+++... ..++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 999999999999999999999999763 2367778889999999999999999999999999999
Q ss_pred EeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcch
Q 001057 890 LIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATA 969 (1170)
Q Consensus 890 LLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 969 (1170)
|++.++.+||+|||+++...... .........+++.|+|||++.+..++.++
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 220 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNID----------------------------YYKKTTNGRLPVKWMAPEALFDRVYTHQS 220 (304)
T ss_pred EEcCCCcEEECCCccceeccccc----------------------------ccccccCCCCCceeeCchhhccCCCCchh
Confidence 99999999999999987531000 00011223467789999999988899999
Q ss_pred hhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 970 DWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 970 DIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
|||||||++|+|++ |..||.+.+..++...+...... ..+..++.++.+||.+||..+|.+||++.++
T Consensus 221 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~ 289 (304)
T cd05101 221 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM--DKPANCTNELYMMMRDCWHAIPSHRPTFKQL 289 (304)
T ss_pred hHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 99999999999998 89999999888888887654422 2346789999999999999999999995444
No 317
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.8e-37 Score=332.61 Aligned_cols=258 Identities=22% Similarity=0.362 Sum_probs=206.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecC----------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRA----------------TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFV 820 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~----------------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNI 820 (1170)
.++|++.+.||.|+||.||+|.+.. ++..||+|++.... .......+.+|+.+|..++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCc
Confidence 3579999999999999999986432 34579999987542 33455788899999999999999
Q ss_pred EEEEeeeecccceEEEEeeccCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcE
Q 001057 821 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG-----------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNL 889 (1170)
Q Consensus 821 VrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~-----------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENI 889 (1170)
+++++++...+.+|+||||+.+|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999999999999997642 366778999999999999999999999999999999
Q ss_pred EeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcch
Q 001057 890 LIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATA 969 (1170)
Q Consensus 890 LLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 969 (1170)
|++.++.++|+|||+++...... .........+++.|+|||++.+..++.++
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~ 213 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGD----------------------------YYRIQGRAVLPIRWMSWESILLGKFTTAS 213 (296)
T ss_pred EEcCCCCEEeccCcccccccCCc----------------------------ceeccCcCcCccccCCHHHHhcCCccchh
Confidence 99999999999999987421000 00011223456789999999888899999
Q ss_pred hhhHHHHHHHHHHh--CCCCCCCCCHHHHHHHHhc-----cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 970 DWWSVGIILFELLI--GIPPFNAKTPQQIFDNIMN-----RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 970 DIWSLGVILYELLT--G~pPF~g~~~~ei~qkIl~-----~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
|||||||++|||++ |..||...+..+....... ........+..++..+.+||.+||+.||.+||++.++.++
T Consensus 214 DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 293 (296)
T cd05095 214 DVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT 293 (296)
T ss_pred hhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 99999999999998 7899988776665544321 1111112235678999999999999999999997666555
Q ss_pred Hc
Q 001057 1043 KQ 1044 (1170)
Q Consensus 1043 Lq 1044 (1170)
|+
T Consensus 294 l~ 295 (296)
T cd05095 294 LL 295 (296)
T ss_pred Hh
Confidence 53
No 318
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.4e-37 Score=330.08 Aligned_cols=252 Identities=19% Similarity=0.293 Sum_probs=204.5
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCE----EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDL----FAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~----VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
+...+|++++.||.|+||+||+|.+..+++. ||+|.+... ........+..|+.++..++||||+++++++. .
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~ 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-G 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-C
Confidence 3456899999999999999999999877774 666665432 12334456778888999999999999999875 4
Q ss_pred cceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..+++||||+++|+|.+++... +.+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++...
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 5678999999999999999764 568999999999999999999999999999999999999999999999999987521
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPF 988 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF 988 (1170)
.. ..........|+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 161 ~~----------------------------~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~ 212 (279)
T cd05111 161 PD----------------------------DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212 (279)
T ss_pred CC----------------------------CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 00 00001123456778999999998889999999999999999998 99999
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 989 NAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.+.....+.+.+.++... ..+...+..+.+++.+|+..||.+||++.++
T Consensus 213 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~el 261 (279)
T cd05111 213 AGMRPHEVPDLLEKGERL--AQPQICTIDVYMVMVKCWMIDENVRPTFKEL 261 (279)
T ss_pred CCCCHHHHHHHHHCCCcC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 988877766666544432 2235578889999999999999999994433
No 319
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.3e-37 Score=327.50 Aligned_cols=240 Identities=27% Similarity=0.399 Sum_probs=199.2
Q ss_pred EeccCCCeEEEEeeecCCCC--EEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceEEEEeecc
Q 001057 765 PISQGAFGRVFLARKRATGD--LFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe--~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
.||+|+||.||+|++..++. .+|+|.+... ......+.+.+|+.++.++ +||||++++++|.....+|+||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999988776 4688877642 2334556788999999999 79999999999999999999999999
Q ss_pred CCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 842 GGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 842 GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
+|+|.+++.... .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~ 159 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 159 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCc
Confidence 999999997542 4788999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-C
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-G 984 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G 984 (1170)
.... ..........+..|+|||++.+..++.++|||||||++|||++ |
T Consensus 160 ~~~~-------------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g 208 (270)
T cd05047 160 RGQE-------------------------------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 208 (270)
T ss_pred cccc-------------------------------hhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCC
Confidence 5210 0000011233567999999988889999999999999999997 9
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
..||.+.+..+.++.+..... +..+..++.++.+||.+||..||.+||++.++
T Consensus 209 ~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 209 GTPYCGMTCAELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred CCCccccCHHHHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 999998888777777654321 12345688999999999999999999995444
No 320
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.5e-37 Score=326.04 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=197.8
Q ss_pred EeccCCCeEEEEeeecC--CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 765 PISQGAFGRVFLARKRA--TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~--TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
.||+|+||+||+|.... ....+|+|.+.... .......+.+|+.+++.++||||+++++.+.....+|+||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 69999999999996532 44578888765432 234456788899999999999999999999999999999999999
Q ss_pred CChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 843 GDLYSLLRNLG-----CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 843 GSL~dlLk~~~-----~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------ 153 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE------ 153 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc------
Confidence 99999997642 2467788899999999999999999999999999999999999999999998642100
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-------CCCCcchhhhHHHHHHHHHHh-CCCCCC
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-------MGHGATADWWSVGIILFELLI-GIPPFN 989 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-------~~ys~ksDIWSLGVILYELLT-G~pPF~ 989 (1170)
+ .........+++.|+|||++.. ..++.++|||||||++|||++ |.+||.
T Consensus 154 -------~---------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 211 (269)
T cd05042 154 -------D---------------YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYP 211 (269)
T ss_pred -------h---------------heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCC
Confidence 0 0001123346778999999853 346789999999999999999 889998
Q ss_pred CCCHHHHHHHHhc-cCCCC--CCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 990 AKTPQQIFDNIMN-RDIPW--PNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 990 g~~~~ei~qkIl~-~~l~f--P~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
.....+.+..+.. ....+ |..+..++....+++..|+ .||.+||++.++.+++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~~ 269 (269)
T cd05042 212 DLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLTY 269 (269)
T ss_pred cCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhcC
Confidence 8776666555443 32222 3344578899999999998 599999998777777765
No 321
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5.7e-37 Score=328.83 Aligned_cols=255 Identities=24% Similarity=0.346 Sum_probs=198.9
Q ss_pred CCe-EEEEEeccCCCeEEEEee----ecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--
Q 001057 758 EDF-EIIKPISQGAFGRVFLAR----KRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-- 830 (1170)
Q Consensus 758 edY-evlk~LG~GgFGtVyLAr----dk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-- 830 (1170)
++| ++++.||+|+||+||++. ...++..||+|++.... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 80 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG 80 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 345 999999999999998865 34578899999987542 223456788899999999999999999987653
Q ss_pred cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
..+|+||||+++|+|.+++... .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....
T Consensus 81 ~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 81 KGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred ceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCC
Confidence 4589999999999999999764 599999999999999999999999999999999999999999999999999875210
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.. ..........++..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 160 ~~---------------------------~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 160 GH---------------------------EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred cc---------------------------hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 00 000001122456779999999888899999999999999999999999865
Q ss_pred CCHH--HHH------------HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 991 KTPQ--QIF------------DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 991 ~~~~--ei~------------qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.... +.. ......... +..+..++.++.+|+.+||+.||++||++.++.+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l 278 (283)
T cd05080 213 PPKKFEEMIGPKQGQMTVVRLIELLERGMR-LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPIL 278 (283)
T ss_pred CcchhhhhhcccccccchhhhhhhhhcCCC-CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 3321 110 011111111 123467889999999999999999999966555444
No 322
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.7e-37 Score=336.12 Aligned_cols=260 Identities=25% Similarity=0.376 Sum_probs=204.0
Q ss_pred EeccC--CCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 765 PISQG--AFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 765 ~LG~G--gFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
+||+| ++|.||+++...+++.||||++.... ........+..|+.+++.++||||++++++|...+.+|++|||+++
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 34444 55667777777899999999987653 2345667899999999999999999999999999999999999999
Q ss_pred CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCC
Q 001057 843 GDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPS 920 (1170)
Q Consensus 843 GSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~s 920 (1170)
|+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||.+........ .
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~--~---- 157 (314)
T cd08216 84 GSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGK--R---- 157 (314)
T ss_pred CCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccc--c----
Confidence 9999999764 4589999999999999999999999999999999999999999999999999874310000 0
Q ss_pred CCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc--CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHH
Q 001057 921 LGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG--MGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFD 998 (1170)
Q Consensus 921 l~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~q 998 (1170)
............++..|+|||++.+ ..++.++|||||||++|+|++|..||..........
T Consensus 158 -----------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~ 220 (314)
T cd08216 158 -----------------QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL 220 (314)
T ss_pred -----------------ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 0000111234467889999999976 358899999999999999999999998765544332
Q ss_pred HHhccCCC-------CC------------------------CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCC
Q 001057 999 NIMNRDIP-------WP------------------------NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPF 1047 (1170)
Q Consensus 999 kIl~~~l~-------fP------------------------~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPf 1047 (1170)
....+... ++ .....++.++.+||.+||+.||.+||+ +.++++|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt---~~~ll~~p~ 297 (314)
T cd08216 221 EKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS---ASQLLNHSF 297 (314)
T ss_pred HHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC---HHHHhcCch
Confidence 21111100 00 001234578899999999999999999 889999999
Q ss_pred CCCC
Q 001057 1048 FKNI 1051 (1170)
Q Consensus 1048 F~~i 1051 (1170)
|+.+
T Consensus 298 ~~~~ 301 (314)
T cd08216 298 FKQC 301 (314)
T ss_pred Hhhh
Confidence 9866
No 323
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3e-37 Score=337.60 Aligned_cols=255 Identities=27% Similarity=0.420 Sum_probs=215.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
..|+.++.||.|+||.||+|+++.+++.||+|.+.............+.+|+.+++.++|+|++++++++......|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 45888999999999999999999999999999987543334445567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+. |+|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~------- 166 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------- 166 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec-------
Confidence 9996 588877754 4568999999999999999999999999999999999999999999999999986420
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc---CCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG---MGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
......|++.|+|||++.+ ..++.++|||||||++|+|++|..||...+.
T Consensus 167 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 167 ---------------------------PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred ---------------------------CcccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 0123468899999999853 4578899999999999999999999988776
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
......+.....+.. ....++..+.+||.+||+.+|.+||+ +.+++.||||...
T Consensus 220 ~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~P~~Rp~---~~~ll~~~~~~~~ 273 (308)
T cd06634 220 MSALYHIAQNESPAL-QSGHWSEYFRNFVDSCLQKIPQDRPT---SEVLLKHRFVLRE 273 (308)
T ss_pred HHHHHHHhhcCCCCc-CcccccHHHHHHHHHHhhCCcccCCC---HHHHhhCcccccc
Confidence 655555554433321 13468899999999999999999999 8899999999764
No 324
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8e-37 Score=321.28 Aligned_cols=249 Identities=23% Similarity=0.423 Sum_probs=208.6
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
..+|++.+.||.|+||.||+|.+. .+..+|+|.+..... ....+.+|+++++.++||||+++++++.....+|+|
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV 77 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence 357999999999999999999875 467899998875432 124578899999999999999999999999999999
Q ss_pred EeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 837 MEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||+.+++|.+++... +.++++.++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 153 (256)
T cd05112 78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD---- 153 (256)
T ss_pred EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccC----
Confidence 9999999999999764 46899999999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ 994 (1170)
.........++..|+|||++.+..++.++|||||||++|||++ |.+||......
T Consensus 154 -------------------------~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~ 208 (256)
T cd05112 154 -------------------------QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS 208 (256)
T ss_pred -------------------------cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 0000112335678999999998889999999999999999998 99999988888
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.+.+.+..+...+ .+...+..+.+|+.+||+.+|.+||+ +.++++
T Consensus 209 ~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~Rp~---~~~~l~ 253 (256)
T cd05112 209 EVVETINAGFRLY--KPRLASQSVYELMQHCWKERPEDRPS---FSLLLH 253 (256)
T ss_pred HHHHHHhCCCCCC--CCCCCCHHHHHHHHHHcccChhhCCC---HHHHHH
Confidence 8887776543222 23457899999999999999999999 555554
No 325
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=1.2e-37 Score=328.02 Aligned_cols=232 Identities=34% Similarity=0.531 Sum_probs=194.1
Q ss_pred CCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCChHHH
Q 001057 769 GAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSL 848 (1170)
Q Consensus 769 GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL~dl 848 (1170)
|.||.||+|+++.+++.||+|.+.+.. ....|...+....||||+++++++.+.+.+|+||||++||+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999999999999999987643 122344555566799999999999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccc
Q 001057 849 LRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLV 928 (1170)
Q Consensus 849 Lk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~ 928 (1170)
+.+...+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 76 l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~------------------- 136 (237)
T cd05576 76 ISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE------------------- 136 (237)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccc-------------------
Confidence 9887789999999999999999999999999999999999999999999999999875321
Q ss_pred cccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC
Q 001057 929 NDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWP 1008 (1170)
Q Consensus 929 ~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP 1008 (1170)
.......++..|+|||++.+..++.++|+||+||++|||++|..||...... +. .... .
T Consensus 137 --------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~-~~~~-~ 195 (237)
T cd05576 137 --------------DSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----IN-THTT-L 195 (237)
T ss_pred --------------cccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc-cccc-c
Confidence 0011234577899999998888999999999999999999999998653321 10 0111 1
Q ss_pred CCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCC
Q 001057 1009 NIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFF 1048 (1170)
Q Consensus 1009 ~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF 1048 (1170)
.++..++..+++||.+||+.||.+|+++ ..+.++++||||
T Consensus 196 ~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 196 NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 2346789999999999999999999985 346999999998
No 326
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-39 Score=398.95 Aligned_cols=259 Identities=34% Similarity=0.577 Sum_probs=223.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
++.-...||.|.||.||-|.+..||+..|+|-+.-.... ......+.+|..+|..++|||+|++|++-.+.+.+||.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 466677899999999999999999999999988766544 5667788999999999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
||.||+|.+++...+..++...+.|..|++.||.|||++|||||||||+||||+.+|.+|++|||.|..+..+.
T Consensus 1315 yC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~------ 1388 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA------ 1388 (1509)
T ss_pred HhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch------
Confidence 99999999999988888999999999999999999999999999999999999999999999999998642110
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc---CCCCcchhhhHHHHHHHHHHhCCCCCCCCCH-H
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG---MGHGATADWWSVGIILFELLIGIPPFNAKTP-Q 994 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTG~pPF~g~~~-~ 994 (1170)
..-......++|||.|||||++.+ .++..++|||||||++.||+||+.||...+. -
T Consensus 1389 --------------------~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~ 1448 (1509)
T KOG4645|consen 1389 --------------------QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW 1448 (1509)
T ss_pred --------------------hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh
Confidence 001123347899999999999986 4688899999999999999999999986554 3
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
.++..+..+.. |.+|..+|.+.+|||.+||+.||.+|++ |.|++.|.|-+
T Consensus 1449 aIMy~V~~gh~--Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~---~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1449 AIMYHVAAGHK--PQIPERLSSEGRDFLEHCLEQDPKMRWT---ASQLLEHAFGK 1498 (1509)
T ss_pred HHHhHHhccCC--CCCchhhhHhHHHHHHHHHhcCchhhhH---HHHHHHhhccc
Confidence 44444444443 4566889999999999999999999998 77999998864
No 327
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-38 Score=362.05 Aligned_cols=260 Identities=27% Similarity=0.482 Sum_probs=209.6
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccce
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~L 833 (1170)
+....|++++.||+||-+.||++...+. ..||+|.+.-. ..+...+..+.+|+.+|.+|+ |.+||+||++-..++.+
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 4556799999999999999999987544 45666654322 335667889999999999997 89999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNLGC-LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~-LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
||||||= ..||..+|+.... ++...+++|..||++|++++|++||||.||||.|+|+ -.|.+||+|||.|.....+.
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred EEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCccc
Confidence 9999965 6799999987754 4446899999999999999999999999999999998 57899999999998542111
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-----------CCcchhhhHHHHHHHHH
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-----------HGATADWWSVGIILFEL 981 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-----------ys~ksDIWSLGVILYEL 981 (1170)
+ .-...+.+||+.||+||.+.... .+.++||||||||||+|
T Consensus 514 T----------------------------sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqM 565 (677)
T KOG0596|consen 514 T----------------------------SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQM 565 (677)
T ss_pred c----------------------------ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHH
Confidence 0 11234679999999999997543 35789999999999999
Q ss_pred HhCCCCCCCCC-HHHHHHHHhcc--CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 982 LIGIPPFNAKT-PQQIFDNIMNR--DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 982 LTG~pPF~g~~-~~ei~qkIl~~--~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
+.|++||.... ...-+..|..- .++||.++.. .++.++++.||.+||.+||+ +.++|+|||++.+
T Consensus 566 vYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~s---i~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 566 VYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWS---IPELLQHPFLQIQ 633 (677)
T ss_pred HhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCC---cHHHhcCcccccc
Confidence 99999997533 23333445443 4577766543 34999999999999999999 8899999999863
No 328
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-36 Score=325.58 Aligned_cols=251 Identities=24% Similarity=0.364 Sum_probs=210.1
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGD----LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE 831 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe----~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~ 831 (1170)
...+|++++.||.|+||+||+|.++.+|+ .||+|.+.+... ......+.+|+.++..++||||+++++++.. .
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 34689999999999999999999877665 689998776532 4455778899999999999999999998887 7
Q ss_pred ceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 899999999999999999874 4699999999999999999999999999999999999999999999999999975310
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~ 989 (1170)
.. .........++..|+|||.+....++.++|+|||||++|||++ |..||.
T Consensus 162 ~~----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~ 213 (279)
T cd05057 162 DE----------------------------KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE 213 (279)
T ss_pred cc----------------------------cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence 00 0000111224678999999988889999999999999999998 999999
Q ss_pred CCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 990 AKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
+....++.+.+..+... ..+...+..+.++|.+||..||.+||++..+
T Consensus 214 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l 261 (279)
T cd05057 214 GIPAVEIPDLLEKGERL--PQPPICTIDVYMVLVKCWMIDAESRPTFKEL 261 (279)
T ss_pred CCCHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 98888888777754322 2235678899999999999999999995544
No 329
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=4.7e-37 Score=340.76 Aligned_cols=257 Identities=32% Similarity=0.516 Sum_probs=209.7
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-ccceE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC-RENLY 834 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd-~~~Ly 834 (1170)
..++|++++.||.|+||.||+|.++.+++.||+|++.+.. ........+..|+.++..++||||++++++|.. ...+|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 3467999999999999999999999999999999886542 223345677899999999999999999999876 56789
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
+||||+ +++|..++.. ..+++..+..++.||+.||.|||++||+||||||.|||++.++.++|+|||++....
T Consensus 87 lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~----- 159 (328)
T cd07856 87 FVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQD----- 159 (328)
T ss_pred EEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccC-----
Confidence 999999 6689888765 468899999999999999999999999999999999999999999999999986310
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
.......+++.|+|||++.+ ..++.++|||||||++|+|++|.+||.+...
T Consensus 160 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~ 211 (328)
T cd07856 160 ----------------------------PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH 211 (328)
T ss_pred ----------------------------CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 01123467889999999866 5689999999999999999999999987765
Q ss_pred HHHHHHHhc---------------c-------------CCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 994 QQIFDNIMN---------------R-------------DIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 994 ~ei~qkIl~---------------~-------------~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
...+..+.+ . ..++......++..+.++|.+||+.+|.+||+ +.+++.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t---~~ell~~ 288 (328)
T cd07856 212 VNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRIS---AAEALAH 288 (328)
T ss_pred HHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCC---HHHHhcC
Confidence 333222111 0 00111111356889999999999999999999 8899999
Q ss_pred CCCCCC
Q 001057 1046 PFFKNI 1051 (1170)
Q Consensus 1046 PfF~~i 1051 (1170)
|||...
T Consensus 289 ~~~~~~ 294 (328)
T cd07856 289 PYLAPY 294 (328)
T ss_pred Cccccc
Confidence 999754
No 330
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-36 Score=322.10 Aligned_cols=253 Identities=23% Similarity=0.378 Sum_probs=209.0
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
+..++|++.+.||+|+||.||++.+. .+..||+|.+... ......+.+|+.+++.++|+||+++++.+.. ..+|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 34578999999999999999999865 4567999987653 2345678899999999999999999999887 7889
Q ss_pred EEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+||||+++++|.+++... ..++...+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~- 155 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN- 155 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC-
Confidence 999999999999999763 35788889999999999999999999999999999999999999999999998742100
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
.........++..|+|||++.+..++.++|+|||||++|+|++ |.+||.+.
T Consensus 156 ----------------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~ 207 (260)
T cd05073 156 ----------------------------EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 207 (260)
T ss_pred ----------------------------CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC
Confidence 0000112345678999999998889999999999999999998 99999988
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
+...+...+..+. ..+ .+...+.++.+++.+||+.+|.+||++..+.++|+
T Consensus 208 ~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 208 SNPEVIRALERGY-RMP-RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred CHHHHHHHHhCCC-CCC-CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 8777777665442 222 33578899999999999999999999666655553
No 331
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.5e-37 Score=343.60 Aligned_cols=265 Identities=34% Similarity=0.528 Sum_probs=212.6
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecc--cc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCR--EN 832 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~--~~ 832 (1170)
..++|++.+.||.|+||.||+|.+..+|+.||+|.+.+.. ........+.+|+.++.++ +||||++++++|... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 4568999999999999999999999999999999886532 1223445677899999999 999999999988654 36
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
+|+||||+. ++|..++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 899999996 5999998775 78899999999999999999999999999999999999999999999999987531000
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
. ...........||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.
T Consensus 162 ~-------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~ 216 (337)
T cd07852 162 E-------------------------NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGT 216 (337)
T ss_pred c-------------------------cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCC
Confidence 0 000112223578999999998865 45788999999999999999999999877
Q ss_pred CHHHHHHHHhccC----------------------------CCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 992 TPQQIFDNIMNRD----------------------------IPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 992 ~~~ei~qkIl~~~----------------------------l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
...+....+.... .........++.++.+||.+||+.||.+||+ +.+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps---~~~il 293 (337)
T cd07852 217 STLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT---AEEAL 293 (337)
T ss_pred ChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccC---HHHHh
Confidence 6555444332211 0011111347889999999999999999999 88999
Q ss_pred cCCCCCCC
Q 001057 1044 QHPFFKNI 1051 (1170)
Q Consensus 1044 qHPfF~~i 1051 (1170)
+||||+..
T Consensus 294 ~~~~~~~~ 301 (337)
T cd07852 294 EHPYVAQF 301 (337)
T ss_pred hChhhhhh
Confidence 99999875
No 332
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.1e-36 Score=323.83 Aligned_cols=251 Identities=25% Similarity=0.371 Sum_probs=206.8
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRAT---GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~T---Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
...+|.+.+.||.|+||.||+|.+... ...||||.+.... .....+.+.+|+.+++.++||||+++++++.+ ..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 346799999999999999999987644 4579999876532 23456788999999999999999999998875 56
Q ss_pred eEEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++|++||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 789999999999999997654 5899999999999999999999999999999999999999999999999998752100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNA 990 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g 990 (1170)
.........+++.|+|||++....++.++|||||||++|+|++ |..||.+
T Consensus 161 -----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 211 (270)
T cd05056 161 -----------------------------SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQG 211 (270)
T ss_pred -----------------------------cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 0000112234578999999988889999999999999999996 9999998
Q ss_pred CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHH
Q 001057 991 KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAR 1040 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~Ae 1040 (1170)
.+..+....+.++... ..+..++..+.+||.+||..+|.+||++.++.
T Consensus 212 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~ 259 (270)
T cd05056 212 VKNNDVIGRIENGERL--PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELK 259 (270)
T ss_pred CCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 8877777666654322 23467899999999999999999999954443
No 333
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.4e-36 Score=318.28 Aligned_cols=242 Identities=26% Similarity=0.387 Sum_probs=201.0
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCC
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGD 844 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGS 844 (1170)
+||.|+||.||+|... ++..||+|++.... .......+.+|+.++..++||||+++++++......|+||||+++++
T Consensus 2 ~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 2 LLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred ccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 6899999999999864 68899999876542 23344578899999999999999999999999999999999999999
Q ss_pred hHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 845 LYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 845 L~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~------------ 146 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG------------ 146 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccc------------
Confidence 99998754 46899999999999999999999999999999999999999999999999998642100
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~ 1002 (1170)
. ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.........+..
T Consensus 147 --~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~ 209 (250)
T cd05085 147 --I---------------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK 209 (250)
T ss_pred --c---------------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc
Confidence 0 000111234578999999988889999999999999999998 9999998887777666654
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHH
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAR 1040 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~Ae 1040 (1170)
... ...+..++..+.+||.+||+.+|.+||++.++.
T Consensus 210 ~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 245 (250)
T cd05085 210 GYR--MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQ 245 (250)
T ss_pred CCC--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 322 123457899999999999999999999954443
No 334
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.8e-37 Score=328.35 Aligned_cols=252 Identities=33% Similarity=0.523 Sum_probs=206.5
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEEe
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
|++.+.||.|+||+||+|+...+++.||||.+.+.... .......+|+..+..++ ||||+++++++.+.+..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 78899999999999999999999999999988654321 12233456889999999 9999999999999999999999
Q ss_pred eccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 839 YLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|+ +|+|.+++.... .+++..+..++.|++.||.|||++||+|+||+|.||+++.++.++|+|||++.....
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~------ 151 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS------ 151 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccC------
Confidence 99 889999997764 789999999999999999999999999999999999999999999999999874210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
........|+..|+|||++.+ ..++.++|+||||+++|+|++|.+||.+....+
T Consensus 152 -------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~ 206 (283)
T cd07830 152 -------------------------RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID 206 (283)
T ss_pred -------------------------CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH
Confidence 001123468899999998854 457889999999999999999999998877655
Q ss_pred HHHHHhccC-------------------CCCCC--------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 996 IFDNIMNRD-------------------IPWPN--------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 996 i~qkIl~~~-------------------l~fP~--------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.+..+...- ..++. .....+..+.+||.+||+.||.+||+ +.|++.||||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt---~~ei~~~~~~ 283 (283)
T cd07830 207 QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT---ASQALQHPYF 283 (283)
T ss_pred HHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCC---HHHHhhCCCC
Confidence 554433210 00000 01123688999999999999999999 8899999998
No 335
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.2e-37 Score=337.39 Aligned_cols=256 Identities=23% Similarity=0.372 Sum_probs=209.6
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCC-------CCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRAT-------GDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYS 826 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~T-------Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~ 826 (1170)
+...+|++.+.||+|+||.||+|++... +..||+|++.... .......+.+|+.++.++ +||||++++++
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 3345799999999999999999986432 2379999876432 334567888999999999 79999999999
Q ss_pred eecccceEEEEeeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEE
Q 001057 827 FTCRENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLL 890 (1170)
Q Consensus 827 Fqd~~~LyLVMEY~~GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENIL 890 (1170)
|.....+|+||||+++|+|.+++.... .++...+..++.||+.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nil 166 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVL 166 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEE
Confidence 999999999999999999999997532 3677888889999999999999999999999999999
Q ss_pred eCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchh
Q 001057 891 IGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATAD 970 (1170)
Q Consensus 891 Ld~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksD 970 (1170)
++.++.+||+|||+++..... ..........++..|+|||++.+..++.++|
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D 218 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNI----------------------------DYYKKTTNGRLPVKWMAPEALFDRVYTHQSD 218 (334)
T ss_pred EcCCCcEEECCcccceecccc----------------------------cccccccCCCcCceEcCHHHhccCCcCchhh
Confidence 999999999999998742100 0000111223456899999999989999999
Q ss_pred hhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 971 WWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 971 IWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
||||||++|||++ |..||.+.+..+.+..+..... +..+..++.++.+||.+||+.+|.+||+ +.+++.+
T Consensus 219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps---~~ell~~ 289 (334)
T cd05100 219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR--MDKPANCTHELYMIMRECWHAVPSQRPT---FKQLVED 289 (334)
T ss_pred hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcccChhhCcC---HHHHHHH
Confidence 9999999999998 8999999988888887765432 1234578899999999999999999999 5555554
No 336
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=363.74 Aligned_cols=239 Identities=26% Similarity=0.437 Sum_probs=209.4
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
..-++-||.|+.|.||+|+.. ++.||||.++.. -..++.-|++|+||||+.+.++|....++||||||
T Consensus 126 IsELeWlGSGaQGAVF~Grl~--netVAVKKV~el----------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEf 193 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFLGRLH--NETVAVKKVREL----------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEF 193 (904)
T ss_pred hhhhhhhccCcccceeeeecc--CceehhHHHhhh----------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeec
Confidence 344566999999999999865 789999976421 12467788999999999999999999999999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCC
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAP 919 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~ 919 (1170)
|..|-|+.+|+....++......+..+|+.|++|||.+.|||||||.-||||..+..|||+|||-++..
T Consensus 194 Ca~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~----------- 262 (904)
T KOG4721|consen 194 CAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL----------- 262 (904)
T ss_pred cccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh-----------
Confidence 999999999999999999999999999999999999999999999999999999999999999988742
Q ss_pred CCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 001057 920 SLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDN 999 (1170)
Q Consensus 920 sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qk 999 (1170)
.......+++||..|||||+|.+.+.+.++|||||||+|||||||..||..-+...++--
T Consensus 263 --------------------~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG 322 (904)
T KOG4721|consen 263 --------------------SDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG 322 (904)
T ss_pred --------------------hhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe
Confidence 112345678999999999999999999999999999999999999999998877766554
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
+-...+.+| +|..++..++-||+.||+..|..||+ ..+||.|
T Consensus 323 VGsNsL~Lp-vPstcP~GfklL~Kqcw~sKpRNRPS---Frqil~H 364 (904)
T KOG4721|consen 323 VGSNSLHLP-VPSTCPDGFKLLLKQCWNSKPRNRPS---FRQILLH 364 (904)
T ss_pred ccCCccccc-CcccCchHHHHHHHHHHhcCCCCCcc---HHHHHHH
Confidence 444445544 56889999999999999999999999 6777877
No 337
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.7e-37 Score=324.69 Aligned_cols=248 Identities=25% Similarity=0.412 Sum_probs=203.4
Q ss_pred EeccCCCeEEEEeeecCCC------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 765 PISQGAFGRVFLARKRATG------DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TG------e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.||.|+||.||+|+++... ..||+|.+.+.. .......+.+|+.+++.++||||+++++++.+....|+|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 5899999999999986544 789999876532 12345678889999999999999999999999999999999
Q ss_pred eccCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-----cEEEEecCCcc
Q 001057 839 YLNGGDLYSLLRNL-------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-----HIKLTDFGLSK 906 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~-------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-----~VKLsDFGLAk 906 (1170)
|+++++|.+++... ..+++..+..++.||+.||.|||+++++|+||||+|||++.++ .++|+|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99999999999642 2478889999999999999999999999999999999999887 89999999987
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CC
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GI 985 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~ 985 (1170)
..... ..........++..|+|||++.+..++.++|||||||++|+|++ |.
T Consensus 160 ~~~~~----------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~ 211 (269)
T cd05044 160 DIYKS----------------------------DYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQ 211 (269)
T ss_pred ccccc----------------------------cccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCC
Confidence 42100 00001122345788999999998889999999999999999998 99
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 986 PPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 986 pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
.||...+..+....+...... ..+..++..+.+||.+||+.+|.+||++..+.+.|+
T Consensus 212 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 212 QPYPALNNQEVLQHVTAGGRL--QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CCCcccCHHHHHHHHhcCCcc--CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 999988877777666543321 234578899999999999999999999666655554
No 338
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.5e-36 Score=324.42 Aligned_cols=257 Identities=19% Similarity=0.298 Sum_probs=211.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecC----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRA----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC- 829 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd- 829 (1170)
+..++|++.+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 455789999999999999999999876 3688999987643 244556788999999999999999999997655
Q ss_pred ccceEEEEeeccCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEe
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNL--------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTD 901 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~--------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsD 901 (1170)
....+++++|+.+|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 56789999999999999999753 3588999999999999999999999999999999999999999999999
Q ss_pred cCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHH
Q 001057 902 FGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFEL 981 (1170)
Q Consensus 902 FGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYEL 981 (1170)
||+++...... .........++..|+|||++.+..++.++|||||||++|||
T Consensus 161 ~g~~~~~~~~~----------------------------~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el 212 (280)
T cd05043 161 NALSRDLFPMD----------------------------YHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWEL 212 (280)
T ss_pred CCCcccccCCc----------------------------eEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHH
Confidence 99997421000 00001123456789999999988899999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 982 LI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 982 LT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
++ |.+||...+..++...+..+. .++ .+..++.++.++|.+||..||.+||++.++.+.|
T Consensus 213 ~~~g~~p~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 273 (280)
T cd05043 213 MTLGQTPYVEIDPFEMAAYLKDGY-RLA-QPINCPDELFAVMACCWALDPEERPSFSQLVQCL 273 (280)
T ss_pred hcCCCCCcCcCCHHHHHHHHHcCC-CCC-CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 98 999999888877776665432 222 2356789999999999999999999966555444
No 339
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.3e-36 Score=318.68 Aligned_cols=244 Identities=26% Similarity=0.370 Sum_probs=203.4
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCC
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|++++++++||||+++++++.+....|+||||+.|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 369999999999999877 999999988765432 45567899999999999999999999999999999999999999
Q ss_pred ChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCC
Q 001057 844 DLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLG 922 (1170)
Q Consensus 844 SL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~ 922 (1170)
+|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 78 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~------------ 145 (251)
T cd05041 78 SLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEG------------ 145 (251)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccC------------
Confidence 999999764 4688999999999999999999999999999999999999999999999999874210
Q ss_pred CCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh
Q 001057 923 SGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIFDNIM 1001 (1170)
Q Consensus 923 s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl 1001 (1170)
+.. ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.........+.
T Consensus 146 -~~~---------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~ 209 (251)
T cd05041 146 -GIY---------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE 209 (251)
T ss_pred -Ccc---------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh
Confidence 000 000011234567999999988889999999999999999998 899999888777766665
Q ss_pred ccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 1002 NRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 1002 ~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
... .. ..+..++.++.+||.+||+.+|.+||+ +.+++
T Consensus 210 ~~~-~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~---~~ell 246 (251)
T cd05041 210 SGY-RM-PAPQLCPEEIYRLMLQCWAYDPENRPS---FSEIY 246 (251)
T ss_pred cCC-CC-CCCccCCHHHHHHHHHHhccChhhCcC---HHHHH
Confidence 432 11 234678899999999999999999999 44554
No 340
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.9e-37 Score=321.83 Aligned_cols=246 Identities=25% Similarity=0.429 Sum_probs=205.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
...+|++.+.||+|+||.||++. .+++.||+|.+.... ....+.+|+.++..++||||+++++++... .+|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 34679999999999999999986 478899999886432 235788999999999999999999988754 5799
Q ss_pred EEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 836 VMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||||+.+++|.+++.... .+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++.... .
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~--~- 152 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGS--M- 152 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecc--c-
Confidence 999999999999997653 48899999999999999999999999999999999999999999999999987421 0
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.......+..|+|||++.+..++.++|+|||||++|+|++ |.+||.+.+
T Consensus 153 ------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 202 (254)
T cd05083 153 ------------------------------GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS 202 (254)
T ss_pred ------------------------------cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC
Confidence 0011223567999999988889999999999999999997 999999988
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
..+....+..+... ..+..++..+.+||.+||+.+|.+||++.++.+.++
T Consensus 203 ~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 203 LKEVKECVEKGYRM--EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred HHHHHHHHhCCCCC--CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 88777776654322 224578899999999999999999999665555443
No 341
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.2e-36 Score=323.87 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=198.8
Q ss_pred CCeEEEEEeccCCCeEEEEee----ecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--cc
Q 001057 758 EDFEIIKPISQGAFGRVFLAR----KRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC--RE 831 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLAr----dk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd--~~ 831 (1170)
.+|++++.||.|+||.||+|. +..+++.||+|.+.... ......+.+|+.+|..++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 579999999999999999997 34578999999986542 3455678899999999999999999987643 35
Q ss_pred ceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
.+|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 689999999999999999764 4689999999999999999999999999999999999999999999999999875310
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.. ..........++..|+|||++.+..++.++|||||||++|||++|..|+..
T Consensus 161 ~~---------------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 213 (284)
T cd05081 161 DK---------------------------EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCS 213 (284)
T ss_pred CC---------------------------cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCC
Confidence 00 000000112244569999999988899999999999999999999877654
Q ss_pred CCHHHH---------------HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 991 KTPQQI---------------FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 991 ~~~~ei---------------~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
...... +..+......++ .+..++.++.+||.+||..+|.+||++.++...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 279 (284)
T cd05081 214 PPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLP-APPGCPAEIYAIMKECWNNDPSQRPSFSELALQ 279 (284)
T ss_pred cchhhhhhcccccccccchHHHHHHHhcCCcCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 321100 111222222222 335688999999999999999999995544433
No 342
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.6e-37 Score=341.70 Aligned_cols=255 Identities=25% Similarity=0.394 Sum_probs=202.6
Q ss_pred CCCCeEEEEEeccCCCeEEEEeee-----cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARK-----RATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTC 829 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArd-----k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd 829 (1170)
..++|++.+.||.|+||+||+|++ ..+++.||||+++... .......+.+|+.+|..+ +||||+++++++..
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTK 82 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence 346899999999999999999984 3567899999987542 234456788999999999 68999999987765
Q ss_pred c-cceEEEEeeccCCChHHHHHhc--------------------------------------------------------
Q 001057 830 R-ENLYLVMEYLNGGDLYSLLRNL-------------------------------------------------------- 852 (1170)
Q Consensus 830 ~-~~LyLVMEY~~GGSL~dlLk~~-------------------------------------------------------- 852 (1170)
. ..+|+||||+.+|+|.+++...
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (343)
T cd05103 83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE 162 (343)
T ss_pred CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence 4 4689999999999999998642
Q ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCC
Q 001057 853 -----------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSL 921 (1170)
Q Consensus 853 -----------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl 921 (1170)
..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~---------- 232 (343)
T cd05103 163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD---------- 232 (343)
T ss_pred hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccC----------
Confidence 13677788889999999999999999999999999999999999999999998742100
Q ss_pred CCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHH-HHHH
Q 001057 922 GSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQ-IFDN 999 (1170)
Q Consensus 922 ~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~e-i~qk 999 (1170)
..........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+..... ....
T Consensus 233 ------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~ 294 (343)
T cd05103 233 ------------------PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 294 (343)
T ss_pred ------------------cchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH
Confidence 00001112345678999999999899999999999999999996 999998765433 3333
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
+..+.. +..+...++++.+++.+||+.||.+||+ +.++++|
T Consensus 295 ~~~~~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rps---~~eil~~ 335 (343)
T cd05103 295 LKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPT---FSELVEH 335 (343)
T ss_pred HhccCC--CCCCCCCCHHHHHHHHHHccCChhhCcC---HHHHHHH
Confidence 333322 1234567889999999999999999999 5666655
No 343
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.1e-36 Score=322.27 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=195.5
Q ss_pred EEeccCCCeEEEEeeec--CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeecc
Q 001057 764 KPISQGAFGRVFLARKR--ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk--~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
+.||+|+||.||+|... .++..+|+|.+..... ......+.+|+.++..++||||+++++++.+...+|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 36899999999999864 3567899998765432 2334578889999999999999999999999999999999999
Q ss_pred CCChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 842 GGDLYSLLRNLG-----CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 842 GGSL~dlLk~~~-----~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
+|+|.+++.... .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~------ 152 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK------ 152 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccC------
Confidence 999999997532 356777888999999999999999999999999999999999999999999864210
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-------CCCcchhhhHHHHHHHHHHh-CCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-------GHGATADWWSVGIILFELLI-GIPPF 988 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-------~ys~ksDIWSLGVILYELLT-G~pPF 988 (1170)
.. .........|++.|+|||++.+. .++.++|||||||++|||++ |..||
T Consensus 153 -------~~---------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~ 210 (269)
T cd05087 153 -------ED---------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPY 210 (269)
T ss_pred -------cc---------------eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCC
Confidence 00 00011234678899999998642 35789999999999999996 99999
Q ss_pred CCCCHHHHHHHHhc-cCC--CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 989 NAKTPQQIFDNIMN-RDI--PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~-~~l--~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
......+....... ... ..|......+..+.+++.+|+ .+|.+||++.++...|.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 211 RHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 87776655443332 222 222333457888999999998 58999999665555443
No 344
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=373.24 Aligned_cols=254 Identities=27% Similarity=0.456 Sum_probs=209.1
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeee-cc--
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFT-CR-- 830 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fq-d~-- 830 (1170)
+.-.+++|.+.|.+|||+.||+|++...|..||+|.+... ++..++.+.+|+++|++|. |+|||.+++... ..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 4445789999999999999999999988899999987654 5778899999999999998 999999998322 11
Q ss_pred ----cceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCcEEeCCCCcEEEEec
Q 001057 831 ----ENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLN--VIHRDLKPDNLLIGQDGHIKLTDF 902 (1170)
Q Consensus 831 ----~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~G--IIHRDIKPENILLd~dG~VKLsDF 902 (1170)
-.++|+||||.||.|-+++... .+|++.++..|+.++++|+.+||... |||||||-|||||+.+|+.|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 2478999999999999999743 56999999999999999999999998 999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILF 979 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILY 979 (1170)
|.|...... +.-..+-.+ ....-....|+.|+|||+|. +.+.+.++|||+|||+||
T Consensus 191 GSatt~~~~-------~~~~~e~~~--------------ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLY 249 (738)
T KOG1989|consen 191 GSATTKILS-------PTSAQEVNY--------------VEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLY 249 (738)
T ss_pred cccccccCC-------CccHHHHHH--------------HHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHH
Confidence 998742100 000000000 00111234699999999985 667899999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh
Q 001057 980 ELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT 1037 (1170)
Q Consensus 980 ELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~ 1037 (1170)
-|+....||..... -.|+++++.||.. ...+..+++||..||+.||.+||+..
T Consensus 250 kLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~ 302 (738)
T KOG1989|consen 250 KLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIY 302 (738)
T ss_pred HHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHH
Confidence 99999999987643 3678899999965 47899999999999999999999943
No 345
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.9e-36 Score=319.51 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=198.4
Q ss_pred EEeccCCCeEEEEeeecC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeee-cccceEEEEee
Q 001057 764 KPISQGAFGRVFLARKRA---TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFT-CRENLYLVMEY 839 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~---TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fq-d~~~LyLVMEY 839 (1170)
+.||+|+||.||+|.+.. .+..||||.+... ......+.+.+|+.+++.++||||+++++++. .....|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998653 3457999987542 23345678889999999999999999999765 45568999999
Q ss_pred ccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 840 LNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 840 ~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
+.+|+|.+++... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~------ 152 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKE------ 152 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCc------
Confidence 9999999999764 346777788899999999999999999999999999999999999999999987421000
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQQIF 997 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ei~ 997 (1170)
. ..........+++.|+|||++.+..++.++|||||||++|||++ |.+||...+..++.
T Consensus 153 -------------------~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~ 212 (262)
T cd05058 153 -------------------Y-YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDIT 212 (262)
T ss_pred -------------------c-eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 0 00001123346778999999998889999999999999999999 57788887777777
Q ss_pred HHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 998 DNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 998 qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..+..+... ..+..++..+.+++.+||..+|.+||++.++...+
T Consensus 213 ~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l 256 (262)
T cd05058 213 VYLLQGRRL--LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRI 256 (262)
T ss_pred HHHhcCCCC--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHH
Confidence 666554322 23456789999999999999999999955444433
No 346
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-36 Score=325.81 Aligned_cols=252 Identities=24% Similarity=0.353 Sum_probs=200.1
Q ss_pred CeEEEEEeccCCCeEEEEeee----cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cc
Q 001057 759 DFEIIKPISQGAFGRVFLARK----RATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR--EN 832 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArd----k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~ 832 (1170)
.|++++.||+|+||.||+|+. ..++..||+|.+.... .......+.+|+.+++.++||||+++++++... ..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence 479999999999999999974 4678899999986542 234456789999999999999999999988775 56
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~ 911 (1170)
+|+||||++|++|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 162 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 162 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccC
Confidence 89999999999999999764 35899999999999999999999999999999999999999999999999998753100
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAK 991 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~ 991 (1170)
. ..........|+..|+|||++.+..++.++|||||||++|+|+++..|+...
T Consensus 163 ~---------------------------~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~ 215 (284)
T cd05079 163 K---------------------------EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSP 215 (284)
T ss_pred c---------------------------cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccc
Confidence 0 0001112345778899999999888999999999999999999987765321
Q ss_pred C---------------HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 T---------------PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~---------------~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
. .......+.. ...+ ..+..++..+.+||.+||+.||.+||+ +.++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt---~~~il~ 278 (284)
T cd05079 216 MTLFLKMIGPTHGQMTVTRLVRVLEE-GKRL-PRPPNCPEEVYQLMRKCWEFQPSKRTT---FQNLIE 278 (284)
T ss_pred cchhhhhcccccccccHHHHHHHHHc-CccC-CCCCCCCHHHHHHHHHHccCCcccCcC---HHHHHH
Confidence 1 1111111211 1122 234578999999999999999999999 555554
No 347
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.5e-37 Score=325.98 Aligned_cols=236 Identities=24% Similarity=0.383 Sum_probs=192.6
Q ss_pred EeccCCCeEEEEeeecCCCC-------EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 765 PISQGAFGRVFLARKRATGD-------LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe-------~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
.||.|+||.||+|.+..++. .||+|.+.+.. ....+.+.+|..++..++||||+++++++......++||
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 78 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQ 78 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEE
Confidence 69999999999999866544 48888875432 344567888999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCc--------EEEEecCCcccc
Q 001057 838 EYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGH--------IKLTDFGLSKVG 908 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~--------VKLsDFGLAk~~ 908 (1170)
||+.+|+|..++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.++. ++|+|||++...
T Consensus 79 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 79 EYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred ecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 9999999999997654 5899999999999999999999999999999999999987765 689999987531
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhC-CC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIG-IP 986 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG-~p 986 (1170)
. ......|++.|+|||++.+. .++.++|||||||++|+|++| .+
T Consensus 159 ~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~ 204 (258)
T cd05078 159 L----------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDK 204 (258)
T ss_pred C----------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 0 01134678899999999864 578999999999999999998 57
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 987 PFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
||...+...... +......+ +...+.++.+||.+||+.||.+||+ +.++++
T Consensus 205 ~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps---~~~il~ 255 (258)
T cd05078 205 PLSALDSQKKLQ-FYEDRHQL---PAPKWTELANLINQCMDYEPDFRPS---FRAIIR 255 (258)
T ss_pred ChhhccHHHHHH-HHHccccC---CCCCcHHHHHHHHHHhccChhhCCC---HHHHHH
Confidence 777666554433 23333333 3456789999999999999999999 555554
No 348
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-37 Score=354.64 Aligned_cols=253 Identities=28% Similarity=0.464 Sum_probs=213.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.+.+++++.||+|-||.||+|..+.+ ..||+|.++...+ ..+.+.+|++||++|+|+|||++++++...+.+|||
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIV 279 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIV 279 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEE
Confidence 34577889999999999999998643 3699999876432 235788999999999999999999999998899999
Q ss_pred EeeccCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 837 MEYLNGGDLYSLLRN--LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~--~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
||||+.|+|.++|+. ...+...+...++.||++|++||+++++|||||-..||||+.++.+||+|||||+... ..
T Consensus 280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~-d~-- 356 (468)
T KOG0197|consen 280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIG-DD-- 356 (468)
T ss_pred EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccC-CC--
Confidence 999999999999987 4569999999999999999999999999999999999999999999999999999421 00
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~ 993 (1170)
.+ .. ....---.-|.|||.+....++.++|||||||+||||+| |+.||.+.+.
T Consensus 357 -----------~Y-----------~~----~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn 410 (468)
T KOG0197|consen 357 -----------EY-----------TA----SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN 410 (468)
T ss_pred -----------ce-----------ee----cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH
Confidence 00 00 000011236999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
.+.++.+..+.. .| .|..+|+++-+++..|+..+|++|||.......+..
T Consensus 411 ~ev~~~le~GyR-lp-~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~ 460 (468)
T KOG0197|consen 411 EEVLELLERGYR-LP-RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLED 460 (468)
T ss_pred HHHHHHHhccCc-CC-CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHH
Confidence 999999987653 22 357899999999999999999999996655554444
No 349
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-37 Score=363.07 Aligned_cols=253 Identities=26% Similarity=0.494 Sum_probs=219.1
Q ss_pred EEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc-cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc--eEEEE
Q 001057 761 EIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI-RKNAVESILAERNILISVRNPFVVRFFYSFTCREN--LYLVM 837 (1170)
Q Consensus 761 evlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~-~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~--LyLVM 837 (1170)
+.-.+||+|+|-+||+|.|..+|..||--.++-.++. .....+++..|+.+|+.|+|||||++|+++.+... +.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 4556899999999999999999998886444333322 34567899999999999999999999999988765 88899
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCcEEeCCC-CcEEEEecCCccccccccCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLN--VIHRDLKPDNLLIGQD-GHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~G--IIHRDIKPENILLd~d-G~VKLsDFGLAk~~~~~~~~ 914 (1170)
|++.+|+|..|+++++..+...++.|++||+.||.|||++. |||||||.+||+|+.+ |.|||+|+|||...
T Consensus 123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~------ 196 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLL------ 196 (632)
T ss_pred ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHh------
Confidence 99999999999999999999999999999999999999986 9999999999999864 89999999999862
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC-CCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN-AKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~-g~~~ 993 (1170)
......+.+|||.|||||++. ..|+..+||||||++|.||+|+..||. ..++
T Consensus 197 --------------------------r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~ 249 (632)
T KOG0584|consen 197 --------------------------RKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP 249 (632)
T ss_pred --------------------------hccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH
Confidence 122334578999999999997 689999999999999999999999996 4678
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.++|+++..+..+-. +..--.+++++||.+||.. .+.|++ |.|+|.||||..-
T Consensus 250 AQIYKKV~SGiKP~s-l~kV~dPevr~fIekCl~~-~~~R~s---a~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 250 AQIYKKVTSGIKPAA-LSKVKDPEVREFIEKCLAT-KSERLS---AKELLKDPFFDED 302 (632)
T ss_pred HHHHHHHHcCCCHHH-hhccCCHHHHHHHHHHhcC-chhccC---HHHHhhChhhccc
Confidence 899999988765421 2233478999999999998 999999 8999999999864
No 350
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.9e-36 Score=348.17 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=207.6
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeec-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeee
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKR-----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSF 827 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk-----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~F 827 (1170)
.+..++|.+.+.||+|+||.||+|++. .+++.||+|++.... .....+.+.+|+.+|..+. |||||++++++
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 455567999999999999999999854 355789999997542 2334567889999999998 99999999999
Q ss_pred ecccceEEEEeeccCCChHHHHHhcC------------------------------------------------------
Q 001057 828 TCRENLYLVMEYLNGGDLYSLLRNLG------------------------------------------------------ 853 (1170)
Q Consensus 828 qd~~~LyLVMEY~~GGSL~dlLk~~~------------------------------------------------------ 853 (1170)
.....+||||||+.+|+|.+++...+
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999999999999996431
Q ss_pred --------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcE
Q 001057 854 --------------------------------------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNL 889 (1170)
Q Consensus 854 --------------------------------------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENI 889 (1170)
.++...+..++.||+.||.|||+.||+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 256677888999999999999999999999999999
Q ss_pred EeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcch
Q 001057 890 LIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATA 969 (1170)
Q Consensus 890 LLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ks 969 (1170)
|++.++.+||+|||+++...... .........|++.|||||++.+..++.++
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 322 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDS----------------------------NYISKGSTFLPLKWMAPESIFNNLYTTLS 322 (401)
T ss_pred EEeCCCEEEEEecCcceeccccc----------------------------ccccCCCcCCCCceeChHHhcCCCCCcHh
Confidence 99999999999999987421000 00011234578899999999988899999
Q ss_pred hhhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 970 DWWSVGIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 970 DIWSLGVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
|||||||++|||++ |..||......+............ ..+..++.++.+||.+||+.+|.+||++.++.+
T Consensus 323 DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 323 DVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM-AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC-CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999998 899998766555544433333222 234678999999999999999999999544433
No 351
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=360.07 Aligned_cols=244 Identities=36% Similarity=0.571 Sum_probs=212.3
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccceE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~Ly 834 (1170)
..+.|.+...+|.|+|+.|-.|.+..+++.+|+|++.+.. ....+|+.++... +||||+++++.+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 4678999999999999999999999999999999998752 2234567666554 6999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEe-CCCCcEEEEecCCccccccccC
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLI-GQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILL-d~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
+|||++.|+.|.+.+.....+. ..+..|++||+.|+.|||.+|||||||||+|||+ +..|+++|+|||.++...
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~---- 467 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE---- 467 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCc----
Confidence 9999999999999988776666 7888899999999999999999999999999999 689999999999998521
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP 993 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~ 993 (1170)
....+.|-|..|.|||++...+|+.++||||||++||+||+|+.||.....
T Consensus 468 -----------------------------~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~ 518 (612)
T KOG0603|consen 468 -----------------------------RSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA 518 (612)
T ss_pred -----------------------------hhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc
Confidence 002234668899999999999999999999999999999999999987665
Q ss_pred H-HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 994 Q-QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 994 ~-ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
. ++..+|..+... ..+|.++++||.+||+.||.+||+ +.+++.||||
T Consensus 519 ~~ei~~~i~~~~~s-----~~vS~~AKdLl~~LL~~dP~~Rl~---~~~i~~h~w~ 566 (612)
T KOG0603|consen 519 GIEIHTRIQMPKFS-----ECVSDEAKDLLQQLLQVDPALRLG---ADEIGAHPWF 566 (612)
T ss_pred hHHHHHhhcCCccc-----cccCHHHHHHHHHhccCChhhCcC---hhhhccCcch
Confidence 5 666666554433 689999999999999999999999 8899999999
No 352
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=5.4e-36 Score=317.83 Aligned_cols=251 Identities=29% Similarity=0.522 Sum_probs=208.9
Q ss_pred CeEEEEEeccCCCeEEEEeeecC-CCCEEEEEEeeccc-------cccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeec
Q 001057 759 DFEIIKPISQGAFGRVFLARKRA-TGDLFAIKVLKKAD-------MIRKNAVESILAERNILIS-VRNPFVVRFFYSFTC 829 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~-TGe~VAIKvLkKs~-------i~~~~~ve~~l~EieILsk-L~HPNIVrL~~~Fqd 829 (1170)
+|++.+.||.|+||.||+|.+.. +++.+|+|.+.... .........+..|+.++.+ ++||||++++++|..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 78999999876432 1233455667788888865 799999999999999
Q ss_pred ccceEEEEeeccCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 830 RENLYLVMEYLNGGDLYSLLRN----LGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~----~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
.+.+|+||||++|++|.+++.. ...+++..++.++.|++.||.|||+ .||+|+||||.|||++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 9999999999999999988743 3468999999999999999999996 7899999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhC
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 984 (1170)
+.... . ........|+..|+|||++.+..++.++|+||||+++|+|++|
T Consensus 161 ~~~~~------------------------------~-~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g 209 (269)
T cd08528 161 AKQKQ------------------------------P-ESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL 209 (269)
T ss_pred eeecc------------------------------c-ccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC
Confidence 87421 0 0012345688999999999988899999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
.+||...+.......+...... +.....++..+.+||.+||+.||.+||++.++.+
T Consensus 210 ~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 210 QPPFYSTNMLSLATKIVEAVYE-PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred CCcccccCHHHHHHHHhhccCC-cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 9999988877777776655433 2122367899999999999999999999554443
No 353
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.1e-36 Score=323.17 Aligned_cols=247 Identities=31% Similarity=0.504 Sum_probs=202.4
Q ss_pred EEEEEeccCCCeEEEEeeec----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 761 EIIKPISQGAFGRVFLARKR----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 761 evlk~LG~GgFGtVyLArdk----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.+.+.||.|+||.||+|... ..+..|+||+++.. ......+.+.+|++++.+++||||+++++++.....+++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 46789999999999999987 45678999998542 2344578899999999999999999999999988889999
Q ss_pred EeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 837 MEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 837 MEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|||+++|+|.++|... ..+++.....++.||+.||.|||+++|+|+||++.|||++.++.+||+|||++......
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~--- 156 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK--- 156 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS---
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---
Confidence 9999999999999886 67999999999999999999999999999999999999999999999999998752100
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCH
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTP 993 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~ 993 (1170)
..........+...|+|||++.+..++.++||||||+++|||++ |..||...+.
T Consensus 157 -------------------------~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~ 211 (259)
T PF07714_consen 157 -------------------------SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN 211 (259)
T ss_dssp -------------------------SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH
T ss_pred -------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 00011223346678999999999889999999999999999999 7899999988
Q ss_pred HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 994 QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 994 ~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.++...+...... ..+..++..+.++|.+||..||.+||++.++
T Consensus 212 ~~~~~~~~~~~~~--~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i 255 (259)
T PF07714_consen 212 EEIIEKLKQGQRL--PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEI 255 (259)
T ss_dssp HHHHHHHHTTEET--TSBTTSBHHHHHHHHHHT-SSGGGS--HHHH
T ss_pred ccccccccccccc--eeccchhHHHHHHHHHHcCCChhhCcCHHHH
Confidence 8888888554432 2346789999999999999999999994433
No 354
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.5e-36 Score=318.94 Aligned_cols=258 Identities=24% Similarity=0.350 Sum_probs=205.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeec----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec--c
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKR----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC--R 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd--~ 830 (1170)
..+|++++.||+|+||.||+|+.. .+++.||+|++...... .....+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 357889999999999999999864 35889999998765432 356788999999999999999999998877 5
Q ss_pred cceEEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..+|+||||+++++|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 67999999999999999997654 58999999999999999999999999999999999999999999999999987531
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
... ..........++..|+|||.+.+..++.++|||||||++|||++|..||.
T Consensus 161 ~~~---------------------------~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~ 213 (284)
T cd05038 161 EDK---------------------------DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQ 213 (284)
T ss_pred cCC---------------------------cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcc
Confidence 000 00000112245567999999998889999999999999999999999987
Q ss_pred CCCHHH--------------HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 990 AKTPQQ--------------IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 990 g~~~~e--------------i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
...... ....++.....++ .+..++.++.+|+.+||+.+|.+||++.++.+.|.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~ 281 (284)
T cd05038 214 SPPAEFLRMIGIAQGQMIVTRLLELLKEGERLP-RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281 (284)
T ss_pred cccchhccccccccccccHHHHHHHHHcCCcCC-CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHh
Confidence 543221 1112222222222 23567889999999999999999999666555443
No 355
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.7e-36 Score=325.77 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=204.9
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGD----LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe----~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
+..++|+.++.||.|+||.||+|.+..+|. .||+|.+.... .......+.+|+.++..++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345789999999999999999999887776 46888876532 233345688999999999999999999988754
Q ss_pred cceEEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
..+++|||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence 5789999999999999997654 58999999999999999999999999999999999999999999999999987421
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPF 988 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF 988 (1170)
.. ..........++..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 161 ~~----------------------------~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~ 212 (303)
T cd05110 161 GD----------------------------EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 212 (303)
T ss_pred Cc----------------------------ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 00 00001122346778999999998889999999999999999997 99999
Q ss_pred CCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 989 NAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.+.........+..+. .++ .+...+..+.++|.+|+..+|.+||++.++
T Consensus 213 ~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l 261 (303)
T cd05110 213 DGIPTREIPDLLEKGE-RLP-QPPICTIDVYMVMVKCWMIDADSRPKFKEL 261 (303)
T ss_pred CCCCHHHHHHHHHCCC-CCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 8877666655554333 222 235678899999999999999999995443
No 356
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=8.9e-36 Score=316.24 Aligned_cols=253 Identities=22% Similarity=0.332 Sum_probs=203.9
Q ss_pred eEEEEEeccCCCeEEEEeeec---CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----
Q 001057 760 FEIIKPISQGAFGRVFLARKR---ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE----- 831 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk---~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~----- 831 (1170)
|++.+.||+|+||.||+|... .+++.||||++.... ......+.+.+|+.+|+.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 677889999999999999864 367899999986543 33445677889999999999999999999876532
Q ss_pred -ceEEEEeeccCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 832 -NLYLVMEYLNGGDLYSLLRNL------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 832 -~LyLVMEY~~GGSL~dlLk~~------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
..+++++|+.+|+|..++... ..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 247899999999999887432 2478899999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI- 983 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT- 983 (1170)
++...... .........+++.|++||.+.+..++.++|||||||++|+|++
T Consensus 160 ~~~~~~~~----------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~ 211 (273)
T cd05074 160 SKKIYSGD----------------------------YYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTR 211 (273)
T ss_pred cccccCCc----------------------------ceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhC
Confidence 87421000 0001112345678999999998889999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 984 GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 984 G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
|.+||.+.+..+.+..+...... ..+...+..+.+|+.+||..+|.+||++..+.+.|
T Consensus 212 g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l 269 (273)
T cd05074 212 GQTPYAGVENSEIYNYLIKGNRL--KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL 269 (273)
T ss_pred CCCCCCCCCHHHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 99999988887777776654321 22356789999999999999999999955444433
No 357
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=7.9e-36 Score=324.90 Aligned_cols=261 Identities=15% Similarity=0.229 Sum_probs=193.8
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCC---CCEEEEEEeeccccccHHH--------HHHHHHHHHHHHhcCCCcEEE
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRAT---GDLFAIKVLKKADMIRKNA--------VESILAERNILISVRNPFVVR 822 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~T---Ge~VAIKvLkKs~i~~~~~--------ve~~l~EieILskL~HPNIVr 822 (1170)
.+...+|++.+.||+|+||+||+|++..+ +..+|+|+........... ......+...+..++|+||++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 34456899999999999999999998877 6778888643221110000 011223334456678999999
Q ss_pred EEeeeeccc----ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEE
Q 001057 823 FFYSFTCRE----NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 823 L~~~Fqd~~----~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VK 898 (1170)
+++++.... ..|++|+++ ..++.+.+.....+++..++.++.|++.||.|||++||+||||||+|||++.++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred EEEeeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEE
Confidence 998765543 347888887 447777777666678999999999999999999999999999999999999999999
Q ss_pred EEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHH
Q 001057 899 LTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIIL 978 (1170)
Q Consensus 899 LsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVIL 978 (1170)
|+|||+|+........ ............||+.|+|||++.+..++.++|||||||++
T Consensus 167 l~DFGla~~~~~~~~~-----------------------~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l 223 (294)
T PHA02882 167 IIDYGIASHFIIHGKH-----------------------IEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM 223 (294)
T ss_pred EEEcCCceeeccCCcc-----------------------cccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence 9999999853210000 00001122345799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCH-H--------HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 979 FELLIGIPPFNAKTP-Q--------QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 979 YELLTG~pPF~g~~~-~--------ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
|||++|.+||.+... . +.+..+....... ...+.++.+++..|+..+|.+||+...+.++
T Consensus 224 ~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~ 292 (294)
T PHA02882 224 LKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKI----KNANKFIYDFIECVTKLSYEEKPDYDALIKI 292 (294)
T ss_pred HHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhcc----CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHh
Confidence 999999999987632 2 2223343333333 3468899999999999999999995544443
No 358
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.2e-36 Score=318.68 Aligned_cols=237 Identities=20% Similarity=0.283 Sum_probs=191.1
Q ss_pred EeccCCCeEEEEeeecC------------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 765 PISQGAFGRVFLARKRA------------TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~------------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
.||+|+||.||+|+... ....||+|++.... ......+..|+.++..++||||+++++++.....
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~ 78 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVE 78 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence 68999999999998532 22368888876532 3344577889999999999999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCc-------EEEEecCC
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGH-------IKLTDFGL 904 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~-------VKLsDFGL 904 (1170)
.++||||+++|+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++|||+
T Consensus 79 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~ 158 (262)
T cd05077 79 NIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGI 158 (262)
T ss_pred CEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCC
Confidence 99999999999999988754 56999999999999999999999999999999999999987664 89999998
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-cCCCCcchhhhHHHHHHHHHH-
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-GMGHGATADWWSVGIILFELL- 982 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYELL- 982 (1170)
+.... ......|+..|+|||++. +..++.++|||||||++|||+
T Consensus 159 ~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 159 PITVL----------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICY 204 (262)
T ss_pred Ccccc----------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHh
Confidence 86421 011245788899999987 466899999999999999998
Q ss_pred hCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 983 IGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 983 TG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
.|..||......+... +....... ....+.++.+||.+||+.||.+||+ +.+|+.+
T Consensus 205 ~~~~p~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~li~~cl~~dp~~Rp~---~~~il~~ 260 (262)
T cd05077 205 NGEIPLKDKTLAEKER-FYEGQCML---VTPSCKELADLMTHCMNYDPNQRPF---FRAIMRD 260 (262)
T ss_pred CCCCCCCCcchhHHHH-HHhcCccC---CCCChHHHHHHHHHHcCCChhhCcC---HHHHHHh
Confidence 5899998766554432 22222221 1345678999999999999999999 5666654
No 359
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=330.38 Aligned_cols=261 Identities=29% Similarity=0.505 Sum_probs=218.7
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCREN 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~ 832 (1170)
...+++.+.+..||.|+.|+||+++.+.+|...|||.+.+.. ..+...+++..++++...+ +|+||+.|++|..+..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~--Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC--CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 345567888899999999999999999999999999998764 4556678888888876665 8999999999999999
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
++|.||.| +..+..++++. ++++|..+-.+...++.||.||-. +||||||+||+|||+|..|+|||||||.+-...
T Consensus 166 V~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv- 243 (391)
T KOG0983|consen 166 VFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV- 243 (391)
T ss_pred HHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceee-
Confidence 99999988 45666666654 679999888999999999999995 589999999999999999999999999986531
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc---CCCCcchhhhHHHHHHHHHHhCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG---MGHGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTG~pP 987 (1170)
.........|.+.|||||.+.- ..|+..+||||||++|+||+||+.|
T Consensus 244 ------------------------------dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yP 293 (391)
T KOG0983|consen 244 ------------------------------DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYP 293 (391)
T ss_pred ------------------------------cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCC
Confidence 0111123468999999999964 3588999999999999999999999
Q ss_pred CCCC-CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 988 FNAK-TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 988 F~g~-~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
|.+. +..+++.+|++...+.......+|+.+++|+..||++|+.+||. -.++|+|||+...
T Consensus 294 y~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~---Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPK---YNKLLEHPFIKRY 355 (391)
T ss_pred CCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcc---hHHHhcCcceeec
Confidence 9984 45677888888655433223459999999999999999999998 7789999999765
No 360
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=5.2e-36 Score=314.37 Aligned_cols=232 Identities=21% Similarity=0.306 Sum_probs=190.1
Q ss_pred EEeccCCCeEEEEeeecCCC----------CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 764 KPISQGAFGRVFLARKRATG----------DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TG----------e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
+.||+|+||.||+|.+..++ ..|++|++.... .....+.+|+.+|+.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 36899999999999998777 357888765432 115778899999999999999999999888 778
Q ss_pred EEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-------cEEEEecCCc
Q 001057 834 YLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-------HIKLTDFGLS 905 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-------~VKLsDFGLA 905 (1170)
|+||||+++|+|.+++.... .++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 99999999999999998765 789999999999999999999999999999999999999888 7999999998
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC--CCCcchhhhHHHHHHHHHHh
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM--GHGATADWWSVGIILFELLI 983 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~--~ys~ksDIWSLGVILYELLT 983 (1170)
.... ......++..|+|||++.+. .++.++|||||||++|+|++
T Consensus 156 ~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~ 201 (259)
T cd05037 156 ITVL----------------------------------SREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICS 201 (259)
T ss_pred cccc----------------------------------cccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHh
Confidence 7421 01123467789999999876 78999999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhh
Q 001057 984 -GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATG 1038 (1170)
Q Consensus 984 -G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~ 1038 (1170)
|..||...+..+....... ....+ ......+.+||.+||+.+|.+||++.+
T Consensus 202 ~~~~p~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 202 NGEEPLSTLSSSEKERFYQD-QHRLP---MPDCAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CCCCCcccCCchhHHHHHhc-CCCCC---CCCchHHHHHHHHHhccChhhCCCHHH
Confidence 6888877654444333322 21112 223478999999999999999999443
No 361
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.5e-36 Score=321.46 Aligned_cols=237 Identities=24% Similarity=0.343 Sum_probs=190.9
Q ss_pred EeccCCCeEEEEeeecCC------------------------CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE
Q 001057 765 PISQGAFGRVFLARKRAT------------------------GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFV 820 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~T------------------------Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNI 820 (1170)
.||+|+||.||+|....+ ...||+|++.... ......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 599999999999975322 2468899876532 2344578889999999999999
Q ss_pred EEEEeeeecccceEEEEeeccCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC----
Q 001057 821 VRFFYSFTCRENLYLVMEYLNGGDLYSLLRN-LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG---- 895 (1170)
Q Consensus 821 VrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~-~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG---- 895 (1170)
+++++++......||||||+++|+|..++.. .+.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999999875 46789999999999999999999999999999999999997644
Q ss_pred ---cEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-CCCCcchhh
Q 001057 896 ---HIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-MGHGATADW 971 (1170)
Q Consensus 896 ---~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-~~ys~ksDI 971 (1170)
.+||+|||++.... ......++..|+|||++.+ ..++.++||
T Consensus 159 ~~~~~kl~d~g~~~~~~----------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv 204 (274)
T cd05076 159 TSPFIKLSDPGVSFTAL----------------------------------SREERVERIPWIAPECVPGGNSLSTAADK 204 (274)
T ss_pred ccceeeecCCccccccc----------------------------------cccccccCCcccCchhhcCCCCCCcHHHH
Confidence 48999999875310 0012356788999999875 568999999
Q ss_pred hHHHHHHHHHH-hCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 972 WSVGIILFELL-IGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 972 WSLGVILYELL-TG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
|||||++|||+ +|..||.+....+....+ ......| ...++.+.+||.+||+.+|.+||+ +.+++++
T Consensus 205 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~cl~~~p~~Rps---~~~il~~ 272 (274)
T cd05076 205 WSFGTTLLEICFDGEVPLKERTPSEKERFY-EKKHRLP---EPSCKELATLISQCLTYEPTQRPS---FRTILRD 272 (274)
T ss_pred HHHHHHHHHHHhCCCCCccccChHHHHHHH-HhccCCC---CCCChHHHHHHHHHcccChhhCcC---HHHHHHh
Confidence 99999999995 799999887665543332 2222222 446778999999999999999999 5666654
No 362
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.2e-35 Score=315.37 Aligned_cols=248 Identities=19% Similarity=0.293 Sum_probs=194.3
Q ss_pred EeccCCCeEEEEeeecCC--CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccC
Q 001057 765 PISQGAFGRVFLARKRAT--GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNG 842 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~T--Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~G 842 (1170)
.||+|+||.||++..... ...+++|.+.... .....+.+.+|+.++..++||||+++++.|.+...+|+||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 699999999999975433 2356667655432 234457889999999999999999999999999999999999999
Q ss_pred CChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 843 GDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 843 GSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
|+|.+++.+. ..+++..++.++.||+.||.|||+++|+||||||+|||++.++.++|+|||++......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~------- 152 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE------- 152 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc-------
Confidence 9999999754 23567778889999999999999999999999999999999999999999998631000
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc-------CCCCcchhhhHHHHHHHHHHh-CCCCCCC
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG-------MGHGATADWWSVGIILFELLI-GIPPFNA 990 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g-------~~ys~ksDIWSLGVILYELLT-G~pPF~g 990 (1170)
.........+|++.|+|||++.. ..++.++|||||||++|||++ |.+||..
T Consensus 153 ---------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~ 211 (268)
T cd05086 153 ---------------------DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSH 211 (268)
T ss_pred ---------------------hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Confidence 00011124568899999999853 235778999999999999996 6889988
Q ss_pred CCHHHHHHHHhccC-C--CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 991 KTPQQIFDNIMNRD-I--PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 991 ~~~~ei~qkIl~~~-l--~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.+..+.+..+.... . .-|.++..++..+.++|..|+ .+|.+||++.++.+.|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 212 LSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 78777777655432 2 223344568899999999999 5899999955554433
No 363
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-37 Score=314.66 Aligned_cols=259 Identities=34% Similarity=0.582 Sum_probs=218.2
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
..|.-.++||+|.||+||+|+++.+++.||+|.++-.+ .+...-...++|+-+|+.+.|.|||+++++...+..+.+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 35777889999999999999999999999999987653 23344567889999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
|||. .+|..+.... +.+..+.++.++.|++.||.|+|+++++||||||.|+||+.+|.+||+|||+|+-+.+.
T Consensus 81 e~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgip----- 154 (292)
T KOG0662|consen 81 EFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP----- 154 (292)
T ss_pred HHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCc-----
Confidence 9994 5898888764 67999999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-CCcchhhhHHHHHHHHHHh-CCCCCCCCCHH
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-HGATADWWSVGIILFELLI-GIPPFNAKTPQ 994 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ 994 (1170)
.+.....+-|.+|++|.++.+.. |+.+.|+||.|||+.|+.. |++.|.|.+..
T Consensus 155 -------------------------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvd 209 (292)
T KOG0662|consen 155 -------------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 209 (292)
T ss_pred -------------------------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHH
Confidence 11112345699999999999865 8999999999999999985 89999999998
Q ss_pred HHHHHHhcc-----CCCCCC------------CC---------ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 995 QIFDNIMNR-----DIPWPN------------IP---------EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 995 ei~qkIl~~-----~l~fP~------------ip---------~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
+++.+|... .-.||. +| ..++..-+||++++|.-+|.+|++ |++.++||||
T Consensus 210 dqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris---aeaalqhpyf 286 (292)
T KOG0662|consen 210 DQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS---AEAALQHPYF 286 (292)
T ss_pred HHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC---HHHHhcCccc
Confidence 888887641 112221 11 245566789999999999999999 7788999999
Q ss_pred CCC
Q 001057 1049 KNI 1051 (1170)
Q Consensus 1049 ~~i 1051 (1170)
.+.
T Consensus 287 ~d~ 289 (292)
T KOG0662|consen 287 SDF 289 (292)
T ss_pred ccc
Confidence 864
No 364
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.1e-36 Score=372.04 Aligned_cols=274 Identities=28% Similarity=0.453 Sum_probs=213.6
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec------
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC------ 829 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd------ 829 (1170)
-..+|+.+..||+||||.||+|+++-+|+.||||.+.-.. .......+.+|+.+|++|+|||||++|.++..
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 3567999999999999999999999999999999987653 44556778999999999999999999864400
Q ss_pred ------------------------------------------------------------------------c-------
Q 001057 830 ------------------------------------------------------------------------R------- 830 (1170)
Q Consensus 830 ------------------------------------------------------------------------~------- 830 (1170)
.
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0
Q ss_pred ----------------------------------cceEEEEeeccCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHH
Q 001057 831 ----------------------------------ENLYLVMEYLNGGDLYSLLRNLGCL-DEDMARVYIAELVLALEYLH 875 (1170)
Q Consensus 831 ----------------------------------~~LyLVMEY~~GGSL~dlLk~~~~L-SEe~ar~IaaQIL~ALeYLH 875 (1170)
..+||-||||+...|.+++.++... ..+.++.+++||+.||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 1268999999988888888776554 57888999999999999999
Q ss_pred hCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCC
Q 001057 876 SLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYL 955 (1170)
Q Consensus 876 s~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~Ym 955 (1170)
++|||||||||.||+|+.++.|||+|||+|+...........+. ..+.... ........+.+||..|+
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~-----------~~~~~~~-g~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDL-----------SFSTNRA-GSNDGDLTSQVGTALYV 782 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhcc-----------Ccccccc-CCCCcccccccceeeee
Confidence 99999999999999999999999999999986211000000000 0000000 01111345678999999
Q ss_pred chHHHhcCC---CCcchhhhHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhccCCCCC-CCCccCCHHHHHHHHHhccCCC
Q 001057 956 APEILLGMG---HGATADWWSVGIILFELLIGIPPFNA-KTPQQIFDNIMNRDIPWP-NIPEEMSVEACDLIDKLLTENP 1030 (1170)
Q Consensus 956 APEVL~g~~---ys~ksDIWSLGVILYELLTG~pPF~g-~~~~ei~qkIl~~~l~fP-~ip~~lS~eakDLIkkLLq~DP 1030 (1170)
|||++.+.. |+.++|+||||+|+|||+. ||.. +....++..+.++.++++ .+....-+....+|.+||+.||
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP 859 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDP 859 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCC
Confidence 999998755 9999999999999999984 6753 445567777777777766 1223445567799999999999
Q ss_pred CCCCChhhHHHHHcCCCCC
Q 001057 1031 VQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 1031 skRpSa~~AeEILqHPfF~ 1049 (1170)
++||| |.|+|++.||-
T Consensus 860 ~kRPt---A~eLL~s~llp 875 (1351)
T KOG1035|consen 860 SKRPT---ATELLNSELLP 875 (1351)
T ss_pred ccCCC---HHHHhhccCCC
Confidence 99999 88999999997
No 365
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=349.38 Aligned_cols=255 Identities=22% Similarity=0.327 Sum_probs=211.8
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.+..+...+...||+|.||+||+|++-. .||||++..... ...+.+.|++|+.++++-+|.||+-+.+++.....
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~- 462 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL- 462 (678)
T ss_pred ccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-
Confidence 4556778899999999999999999864 399999987654 44588999999999999999999999999988776
Q ss_pred EEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
.||..+|+|.+|+.+|+.. ..|.....+.|++||++|+.|||.++|||||||..||+|.+++.|||+||||+..-...
T Consensus 463 AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w- 541 (678)
T KOG0193|consen 463 AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRW- 541 (678)
T ss_pred eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeee-
Confidence 8999999999999999754 45888999999999999999999999999999999999999999999999999752111
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc---CCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG---MGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
..........|...|||||++.. ..|++.+|||||||++|||++|..||.
T Consensus 542 ---------------------------~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys 594 (678)
T KOG0193|consen 542 ---------------------------SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS 594 (678)
T ss_pred ---------------------------ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence 11222334568889999999974 468999999999999999999999999
Q ss_pred CCCHHHHHHHHhccCCC--CCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 990 AKTPQQIFDNIMNRDIP--WPNIPEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~--fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
..+.++++-.+-.+.+. .......++.++++|+..|+.+++++||....+..
T Consensus 595 i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 595 IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 77777666555444221 11223567889999999999999999999554433
No 366
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-37 Score=340.33 Aligned_cols=258 Identities=29% Similarity=0.557 Sum_probs=213.9
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--C----cEEEEEee
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN--P----FVVRFFYS 826 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H--P----NIVrL~~~ 826 (1170)
+....++|.++..+|+|.||.|..|.+..++..||||+++.-. ...+..+-|+++|.++.+ | -+|.+.++
T Consensus 84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 84 GDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred ccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 3455789999999999999999999999999999999987643 344567789999999842 3 37889999
Q ss_pred eecccceEEEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-----------
Q 001057 827 FTCRENLYLVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ----------- 893 (1170)
Q Consensus 827 Fqd~~~LyLVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~----------- 893 (1170)
|.-.++.|||+|.+ |-+++++|.+++ +|+-+.++.+.+|++.+++|||+++++|.||||||||+-+
T Consensus 160 FdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 160 FDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred hhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCC
Confidence 99999999999998 779999998764 6999999999999999999999999999999999999841
Q ss_pred ---------CCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC
Q 001057 894 ---------DGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG 964 (1170)
Q Consensus 894 ---------dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ 964 (1170)
+..|+|+|||.|+... ....+.+.|..|+|||++++-+
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~---------------------------------e~hs~iVsTRHYRAPEViLgLG 285 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDH---------------------------------EHHSTIVSTRHYRAPEVILGLG 285 (415)
T ss_pred ccceeccCCCcceEEEecCCcceec---------------------------------cCcceeeeccccCCchheeccC
Confidence 3358999999997521 1124678899999999999999
Q ss_pred CCcchhhhHHHHHHHHHHhCCCCCCCCCHHH---HHHHHhc------------------cCCCCCCCC------------
Q 001057 965 HGATADWWSVGIILFELLIGIPPFNAKTPQQ---IFDNIMN------------------RDIPWPNIP------------ 1011 (1170)
Q Consensus 965 ys~ksDIWSLGVILYELLTG~pPF~g~~~~e---i~qkIl~------------------~~l~fP~ip------------ 1011 (1170)
++.++||||+||||+|+.+|...|++.+..+ +++.|+. +.+.||+..
T Consensus 286 wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~c 365 (415)
T KOG0671|consen 286 WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPC 365 (415)
T ss_pred cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCC
Confidence 9999999999999999999999999877544 5555542 233344211
Q ss_pred ----------ccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 1012 ----------EEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1012 ----------~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
...-.++.|||++||.+||.+|+| +.|+|.||||+..
T Consensus 366 kpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT---l~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 366 KPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT---LREALSHPFFARL 412 (415)
T ss_pred ccHHHHhccCcHHHhHHHHHHHHHHccCcccccc---HHHHhcCHHhhcC
Confidence 011234789999999999999999 8899999999864
No 367
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=345.13 Aligned_cols=256 Identities=29% Similarity=0.463 Sum_probs=217.3
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCC---E-EEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGD---L-FAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe---~-VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
++-.+.++||+|+||.||+|+.+..+. . ||+|..+........++..+++|.++|++++|||||++||+.....-+
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 345566899999999999999875432 3 899988764545678889999999999999999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
|||||+|+||+|.++|++.+ .++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+||||++...
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~--- 313 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS--- 313 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc---
Confidence 99999999999999999886 49999999999999999999999999999999999999999999999999987521
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAK 991 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~ 991 (1170)
.+. . .....---..|+|||.+....|+.++|||||||++||+.+ |..||.+.
T Consensus 314 -------------~~~-----------~---~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 314 -------------QYV-----------M---KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM 366 (474)
T ss_pred -------------cee-----------e---ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence 000 0 0000012347999999999999999999999999999998 89999999
Q ss_pred CHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 992 TPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 992 ~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
...++...|....+..+ .+...+.++..++.+|+..||++|+++..+.+.++
T Consensus 367 ~~~~v~~kI~~~~~r~~-~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 367 KNYEVKAKIVKNGYRMP-IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CHHHHHHHHHhcCccCC-CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 99999999966555443 34678999999999999999999999776655443
No 368
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-34 Score=295.38 Aligned_cols=243 Identities=49% Similarity=0.838 Sum_probs=209.3
Q ss_pred CCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCChHHHH
Q 001057 770 AFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLL 849 (1170)
Q Consensus 770 gFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlL 849 (1170)
+||.||+|.+..+|+.||+|++........ .+.+.+|+.+++.++|+||+++++.+......+++|||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 689999999998999999999876543221 578889999999999999999999999889999999999999999999
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCcccc
Q 001057 850 RNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVN 929 (1170)
Q Consensus 850 k~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~ 929 (1170)
.....++...+..++.+++.+|.|||+.||+|+||+|.||+++.++.++|+|||++.....
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~------------------- 139 (244)
T smart00220 79 KKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDP------------------- 139 (244)
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecc-------------------
Confidence 8776689999999999999999999999999999999999999999999999999875210
Q ss_pred ccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCC-CCHHHHHHHHhccCCCCC
Q 001057 930 DELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNA-KTPQQIFDNIMNRDIPWP 1008 (1170)
Q Consensus 930 ~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g-~~~~ei~qkIl~~~l~fP 1008 (1170)
........|+..|++||.+.+..++.++||||||+++|+|++|..||.. .+...+.+.+........
T Consensus 140 ------------~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 207 (244)
T smart00220 140 ------------GGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP 207 (244)
T ss_pred ------------ccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc
Confidence 0022345688899999999988899999999999999999999999988 666666666665555443
Q ss_pred CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 1009 NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 1009 ~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
.....++.++.+++.+||..+|.+||+ +.++++||||
T Consensus 208 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~---~~~~~~~~~~ 244 (244)
T smart00220 208 PPEWKISPEAKDLIRKLLVKDPEKRLT---AEEALQHPFF 244 (244)
T ss_pred cccccCCHHHHHHHHHHccCCchhccC---HHHHhhCCCC
Confidence 222228899999999999999999998 8899999997
No 369
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-36 Score=320.98 Aligned_cols=264 Identities=25% Similarity=0.357 Sum_probs=211.2
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc--
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE-- 831 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~-- 831 (1170)
.++.++|++.+.||.|||+.||+++...+++.||+|.+.-.. .+..+..++|++..++++||||++++++...+.
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 356678999999999999999999999999999999887543 466788999999999999999999987665433
Q ss_pred ---ceEEEEeeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCcEEeCCCCcEEEEec
Q 001057 832 ---NLYLVMEYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSLN--VIHRDLKPDNLLIGQDGHIKLTDF 902 (1170)
Q Consensus 832 ---~LyLVMEY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~G--IIHRDIKPENILLd~dG~VKLsDF 902 (1170)
..||+++|...|+|.+.+... ..+++.++..|+.+|+.||++||... ++||||||.|||+...+.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 499999999999999999753 36999999999999999999999998 999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC---CCCcchhhhHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM---GHGATADWWSVGIILF 979 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~---~ys~ksDIWSLGVILY 979 (1170)
|.+........... +...+ + ....-..|..|+|||.+.-. ..+.++|||||||+||
T Consensus 174 GS~~~a~i~i~~~~-----------------~a~~l---Q-e~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLY 232 (302)
T KOG2345|consen 174 GSATQAPIQIEGSR-----------------QALRL---Q-EWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLY 232 (302)
T ss_pred cCccccceEeechH-----------------HHHHH---H-HHHHHhCCCcccCchheecccCcccccccchhhhhHHHH
Confidence 99875321111000 00000 0 11123458889999998643 4688999999999999
Q ss_pred HHHhCCCCCCCCCH--HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 980 ELLIGIPPFNAKTP--QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 980 ELLTG~pPF~g~~~--~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
.|+.|..||...-. ..+.-.+.++++.||+-+ ..|..+.+||+.||+.||.+||+ +.+++.+
T Consensus 233 a~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~---i~~ll~~ 296 (302)
T KOG2345|consen 233 AMMFGESPFERIYQQGGSLALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPT---IPELLSK 296 (302)
T ss_pred HHHHcCCcchHHhhcCCeEEEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCC---HHHHHHH
Confidence 99999999953211 111224556788888654 48999999999999999999999 5566654
No 370
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=333.65 Aligned_cols=254 Identities=27% Similarity=0.365 Sum_probs=199.2
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-ceE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE-NLY 834 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~-~Ly 834 (1170)
..++|..-..||+|+||.||+|.... |..||||.+....... ...|.+|+.+|.+++|||+|+|+++|.+.+ +.+
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~ 148 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRL 148 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEE
Confidence 34678888899999999999998754 4899999776543211 345999999999999999999999999988 599
Q ss_pred EEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLN---VIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~G---IIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
||+|||++|+|.++|.... .+++.....|+.+++.||+|||... ||||||||+|||||.+...||+|||+|+...
T Consensus 149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~ 228 (361)
T KOG1187|consen 149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP 228 (361)
T ss_pred EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence 9999999999999998764 8999999999999999999999854 9999999999999999999999999997521
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccc-cCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSV-AGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~-vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
. . .....+. .||.+|+|||++.....+.++|||||||+|.||++|+.|.
T Consensus 229 ~-----------------------------~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~ 278 (361)
T KOG1187|consen 229 E-----------------------------G-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAV 278 (361)
T ss_pred c-----------------------------c-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCccc
Confidence 0 0 0011112 7999999999999888999999999999999999999888
Q ss_pred CCCC---HHHHHH----HHhccC---CCCCCCC-ccCC--HH---HHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 989 NAKT---PQQIFD----NIMNRD---IPWPNIP-EEMS--VE---ACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 989 ~g~~---~~ei~q----kIl~~~---l~fP~ip-~~lS--~e---akDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
.... ...+.. .+.++. +--|.+. ...+ .+ +..+..+|++.+|..||++.++.+.|
T Consensus 279 d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L 349 (361)
T KOG1187|consen 279 DQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKEL 349 (361)
T ss_pred CCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHH
Confidence 7432 111111 111111 1112221 1222 22 55677899999999999987765555
No 371
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.7e-36 Score=325.50 Aligned_cols=263 Identities=32% Similarity=0.549 Sum_probs=207.8
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCC----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-cc
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATG----DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC-RE 831 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TG----e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd-~~ 831 (1170)
...|+++..||+|+||.||+|..+.++ +.||||.++...- .........+|+.+++.++||||+.|..+|.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 346999999999999999999665543 3799998875422 22334567899999999999999999999887 78
Q ss_pred ceEEEEeeccCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC----CcEEEEec
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL-----GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD----GHIKLTDF 902 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~-----~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d----G~VKLsDF 902 (1170)
.++|++||.+. ||+.+|+-+ ..++..+++.++.||+.|+.|||++=|+||||||.||||..+ |.|||+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 89999999965 999999633 358999999999999999999999999999999999999888 89999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFEL 981 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYEL 981 (1170)
|+|+.+. . .++. + ......+-|.+|+|||.++|. .|+.++|+|++|||+.||
T Consensus 181 GlaR~~~--~------------------plkp---l----~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaEl 233 (438)
T KOG0666|consen 181 GLARLFN--N------------------PLKP---L----ASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAEL 233 (438)
T ss_pred cHHHHhh--c------------------cccc---c----ccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHH
Confidence 9999742 0 0000 0 011235679999999999986 489999999999999999
Q ss_pred HhCCCCCCCCCH---------HHHHHHHhc-----cCCCCCCC---C--------------------------ccCCHHH
Q 001057 982 LIGIPPFNAKTP---------QQIFDNIMN-----RDIPWPNI---P--------------------------EEMSVEA 1018 (1170)
Q Consensus 982 LTG~pPF~g~~~---------~ei~qkIl~-----~~l~fP~i---p--------------------------~~lS~ea 1018 (1170)
|+-.|.|.+... .+++++|++ ..-.||.+ | ..-++.+
T Consensus 234 Ltl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a 313 (438)
T KOG0666|consen 234 LTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSA 313 (438)
T ss_pred HccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchH
Confidence 999999976432 234445543 11122211 0 1135568
Q ss_pred HHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 1019 CDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1019 kDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.+|+.+||++||.+|++ |++.|+|+||..-
T Consensus 314 ~~LL~klL~yDP~kRIt---a~qAleh~yF~~d 343 (438)
T KOG0666|consen 314 LDLLQKLLTYDPIKRIT---AEQALEHPYFTED 343 (438)
T ss_pred HHHHHHHhccCchhhcc---HHHHhcccccccC
Confidence 99999999999999999 7888999999865
No 372
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=327.08 Aligned_cols=153 Identities=26% Similarity=0.448 Sum_probs=132.9
Q ss_pred cchhhccccCCCCCCCCCCCCCC-CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHH
Q 001057 735 DEDTVRSLRTSPINPCSKDRTSI-EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILI 813 (1170)
Q Consensus 735 dee~v~sl~~sp~~p~~~~~i~i-edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILs 813 (1170)
+++....|+.+.|+|+..+.... .+|-+.++||+|-|++||||.+..+.++||||+.+... ...+..+.|+.+|+
T Consensus 54 eqE~~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~ 129 (590)
T KOG1290|consen 54 EQEDPEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQ 129 (590)
T ss_pred cccChhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHH
Confidence 34455678899999998776666 89999999999999999999999999999999988754 44567788999999
Q ss_pred hcC-----C---CcEEEEEeeeec----ccceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 001057 814 SVR-----N---PFVVRFFYSFTC----RENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHS-LN 878 (1170)
Q Consensus 814 kL~-----H---PNIVrL~~~Fqd----~~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs-~G 878 (1170)
+++ | .+||+|++.|.. ..++|||+|++ |-+|..+|... +.++...++.|++|||.||.|||. .|
T Consensus 130 ~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg 208 (590)
T KOG1290|consen 130 QVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG 208 (590)
T ss_pred HHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 874 3 479999999975 45899999999 78999999764 569999999999999999999995 59
Q ss_pred eeeccCCCCcEEeC
Q 001057 879 VIHRDLKPDNLLIG 892 (1170)
Q Consensus 879 IIHRDIKPENILLd 892 (1170)
|||.||||+|||+.
T Consensus 209 IIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 209 IIHTDLKPENVLLC 222 (590)
T ss_pred ccccCCCcceeeee
Confidence 99999999999994
No 373
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.9e-34 Score=341.88 Aligned_cols=262 Identities=21% Similarity=0.336 Sum_probs=181.6
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEee---
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRAT----GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYS--- 826 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~T----Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~--- 826 (1170)
....++|.+.+.||+|+||.||+|++..+ +..||+|.+..... .+....+ .+....+.+++.++..
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~~~~~~~~~~~~~~~ 200 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRACPNSCADFVYGFLE 200 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhhchhhHHHHHHhhhc
Confidence 44668999999999999999999999988 99999998764321 1111111 1112222222222221
Q ss_pred ---eecccceEEEEeeccCCChHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCeeecc
Q 001057 827 ---FTCRENLYLVMEYLNGGDLYSLLRNLGC--------------------LDEDMARVYIAELVLALEYLHSLNVIHRD 883 (1170)
Q Consensus 827 ---Fqd~~~LyLVMEY~~GGSL~dlLk~~~~--------------------LSEe~ar~IaaQIL~ALeYLHs~GIIHRD 883 (1170)
......++|||||+.+++|.+++..... .....+..++.||+.||.|||++||+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 2345679999999999999999875421 12344667999999999999999999999
Q ss_pred CCCCcEEeCC-CCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc
Q 001057 884 LKPDNLLIGQ-DGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG 962 (1170)
Q Consensus 884 IKPENILLd~-dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g 962 (1170)
|||+|||++. ++.+||+|||+|+.... + ........+||+.|||||++..
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~-------------~----------------~~~~~~~~~~t~~Y~APE~~~~ 331 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRV-------------G----------------INYIPKEFLLDPRYAAPEQYIM 331 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCcccccc-------------c----------------cccCCcccccCCCccChHHhhc
Confidence 9999999986 57999999999974210 0 0112235688999999997753
Q ss_pred CC----------------------CCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHH-hccCCC------------C
Q 001057 963 MG----------------------HGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNI-MNRDIP------------W 1007 (1170)
Q Consensus 963 ~~----------------------ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkI-l~~~l~------------f 1007 (1170)
.. ++.++|||||||+||||+++..|+.. ....+..+ ...... .
T Consensus 332 ~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 409 (566)
T PLN03225 332 STQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRAS 409 (566)
T ss_pred cCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccc
Confidence 22 34456999999999999997665432 22222221 111110 0
Q ss_pred CC------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhh
Q 001057 1008 PN------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTL 1056 (1170)
Q Consensus 1008 P~------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L 1056 (1170)
+. +.......+++||.+||++||.+||+ +.++|+||||++..+..+
T Consensus 410 ~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t---a~e~L~Hpff~~~~~~~~ 461 (566)
T PLN03225 410 PDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS---AKAALAHPYFDREGLLGL 461 (566)
T ss_pred hhhhhhhhhccccchHHHHHHHHHccCCcccCCC---HHHHhCCcCcCCCCcccc
Confidence 00 00112345669999999999999999 889999999998876543
No 374
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-34 Score=347.99 Aligned_cols=260 Identities=27% Similarity=0.441 Sum_probs=222.6
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeec-----CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeee
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKR-----ATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFT 828 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk-----~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fq 828 (1170)
.+...+-...+.||+|+||+||+|+-. .....||||.++... ...+.+.|.+|+++|..++|||||+|++++.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 345567788899999999999999864 244689999998653 3457789999999999999999999999999
Q ss_pred cccceEEEEeeccCCChHHHHHhcC----------C----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC
Q 001057 829 CRENLYLVMEYLNGGDLYSLLRNLG----------C----LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD 894 (1170)
Q Consensus 829 d~~~LyLVMEY~~GGSL~dlLk~~~----------~----LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d 894 (1170)
.++-+|||+|||..|||.++|.... . |+..+...++.||+.|+.||-++.+|||||-..|+||+++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999999999999996431 2 7888899999999999999999999999999999999999
Q ss_pred CcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHH
Q 001057 895 GHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSV 974 (1170)
Q Consensus 895 G~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSL 974 (1170)
-.|||+||||++..... +++ + ......=-..||+||.|+...|+.++||||+
T Consensus 640 l~VKIsDfGLsRdiYss-------------DYY-----k----------~~~~t~lPIRWMppEsIly~kFTteSDVWs~ 691 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSS-------------DYY-----K----------VRGNTLLPIRWMPPESILYGKFTTESDVWSF 691 (774)
T ss_pred eEEEecccccchhhhhh-------------hhh-----c----------ccCCceeeeecCCHHHhhcCcccchhhhhhh
Confidence 99999999999864200 000 0 0001111347999999999999999999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 975 GIILFELLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 975 GVILYELLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
||+|||+++ |..||++.+.++.++.|.++++ + ..|.+++.++.+|+..|++.+|.+||++.++.-+|++
T Consensus 692 GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L-~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~ 761 (774)
T KOG1026|consen 692 GVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-L-SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQA 761 (774)
T ss_pred hhhhhhhhccccCcccccchHHHHHHHHcCCc-c-cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHH
Confidence 999999997 9999999999999999999987 4 4689999999999999999999999997777766654
No 375
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=341.65 Aligned_cols=253 Identities=31% Similarity=0.464 Sum_probs=199.0
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc------
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE------ 831 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~------ 831 (1170)
..+..-..||+||||.||+++++.||+.||||.+++.. .....+...+|++||++++|||||+++++=.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence 44677788999999999999999999999999988754 3345677889999999999999999998755443
Q ss_pred ceEEEEeeccCCChHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeC--CCC--cEEEEecCC
Q 001057 832 NLYLVMEYLNGGDLYSLLRN---LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIG--QDG--HIKLTDFGL 904 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~---~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd--~dG--~VKLsDFGL 904 (1170)
...+|||||.||+|+.++.+ ...|++.+.+.++..++.||.|||++||+||||||.||++- .+| ..||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 46899999999999999974 35699999999999999999999999999999999999983 334 369999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-cCCCCcchhhhHHHHHHHHHHh
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-GMGHGATADWWSVGIILFELLI 983 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-g~~ys~ksDIWSLGVILYELLT 983 (1170)
|+.. ..+....+.+||+.|++||++. ...|+..+|.|||||++|+++|
T Consensus 171 Arel-------------------------------~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caT 219 (732)
T KOG4250|consen 171 AREL-------------------------------DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECAT 219 (732)
T ss_pred cccC-------------------------------CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhc
Confidence 9853 1122456889999999999998 4789999999999999999999
Q ss_pred CCCCCCCCC----HHHHHHHHhc---------------cCCC----CCCCCccCCHH----HHHHHHHhccCCCCCCC--
Q 001057 984 GIPPFNAKT----PQQIFDNIMN---------------RDIP----WPNIPEEMSVE----ACDLIDKLLTENPVQRL-- 1034 (1170)
Q Consensus 984 G~pPF~g~~----~~ei~qkIl~---------------~~l~----fP~ip~~lS~e----akDLIkkLLq~DPskRp-- 1034 (1170)
|..||...- ..++.-.+.. +.+. +| .|..++.. +-..+..+|..+|.+|.
T Consensus 220 G~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP-~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~ 298 (732)
T KOG4250|consen 220 GELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLP-QPNHLSRGLATRLTKWLASMLEWNPRKRGHE 298 (732)
T ss_pred cCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCC-CcccccHHHHhhhhHHHHHHHhhhHHHhCCC
Confidence 999995321 2223222221 1111 22 13344443 44667788999999998
Q ss_pred C----hhhHHHHHc
Q 001057 1035 G----ATGAREVKQ 1044 (1170)
Q Consensus 1035 S----a~~AeEILq 1044 (1170)
+ .....+||+
T Consensus 299 ~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 299 GFDRFFAEVDDILN 312 (732)
T ss_pred CcchHHHHHHHHHh
Confidence 3 234555555
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-34 Score=339.53 Aligned_cols=257 Identities=32% Similarity=0.529 Sum_probs=221.1
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeec-----cc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTC-----RE 831 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd-----~~ 831 (1170)
+.|+++.+||.|.+|.||+++++.+++..|+|++.... ..-+.+..|.+||+.+ +|||++.+|++|.- ++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 56999999999999999999999999999999976543 3345677899999876 59999999998864 46
Q ss_pred ceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
.++||||||.||+..+++++. .++.|+.+..|+++++.||.+||.+.+||||||-.|||++.+|.|||+|||++...
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl- 173 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL- 173 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee-
Confidence 799999999999999999764 57999999999999999999999999999999999999999999999999998742
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-----CCCcchhhhHHHHHHHHHHhC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-----GHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-----~ys~ksDIWSLGVILYELLTG 984 (1170)
+....+.++.+|||.|||||++... .|+..+|+||||++..||.-|
T Consensus 174 -----------------------------dsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG 224 (953)
T KOG0587|consen 174 -----------------------------DSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEG 224 (953)
T ss_pred -----------------------------ecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCC
Confidence 2334466788999999999999753 478889999999999999999
Q ss_pred CCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 985 IPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 985 ~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
.+|+....+...+-.|-....+-..-+...+.++.+||..||.+|-.+||+ ..++|.|||+..-
T Consensus 225 ~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~---~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 225 APPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPS---TEELLKHPFITEQ 288 (953)
T ss_pred CCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcc---hhhhccCCccccc
Confidence 999999888776655544433322235688999999999999999999999 8899999999844
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=325.39 Aligned_cols=269 Identities=29% Similarity=0.451 Sum_probs=218.9
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc----cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec-
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD----MIRKNAVESILAERNILISVRNPFVVRFFYSFTC- 829 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~----i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd- 829 (1170)
...++|-++.+||+|||+.||+|.+....++||+|+-.... ....+..++..+|..|.+.|+||-||++|++|.-
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 44568999999999999999999999999999999854322 1123456788999999999999999999999975
Q ss_pred ccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--CeeeccCCCCcEEeCC---CCcEEEEecCC
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSL--NVIHRDLKPDNLLIGQ---DGHIKLTDFGL 904 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~--GIIHRDIKPENILLd~---dG~VKLsDFGL 904 (1170)
.+.+|-|+|||+|.+|..+|+.+..+++.+++.|+.||+.||.||... -|||-||||.||||-. .|.|||+||||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 467999999999999999999999999999999999999999999976 5999999999999953 47899999999
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC----CCCcchhhhHHHHHHHH
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM----GHGATADWWSVGIILFE 980 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~----~ys~ksDIWSLGVILYE 980 (1170)
+++..-. +..+ . .....+....||.||++||.+.-. ..+.++||||+|||+|.
T Consensus 620 SKIMddd--------Sy~~-----------v----dGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQ 676 (775)
T KOG1151|consen 620 SKIMDDD--------SYNS-----------V----DGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQ 676 (775)
T ss_pred hhhccCC--------ccCc-----------c----cceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhh
Confidence 9974200 0000 0 112234556899999999988632 35788999999999999
Q ss_pred HHhCCCCCCCCC-HHHHHH--HHhc-cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 981 LLIGIPPFNAKT-PQQIFD--NIMN-RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 981 LLTG~pPF~g~~-~~ei~q--kIl~-~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
+|.|+.||...- ...+++ .|++ ..+.||.. ..++.++++||++||++.-..|.. +.++-.||||..
T Consensus 677 ClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D---V~qLA~dpyllP 746 (775)
T KOG1151|consen 677 CLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID---VQQLACDPYLLP 746 (775)
T ss_pred hhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhh---HHHHccCccccc
Confidence 999999997543 333433 2333 45667754 468999999999999999999976 889999999964
No 378
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=6.8e-35 Score=332.59 Aligned_cols=263 Identities=30% Similarity=0.495 Sum_probs=217.7
Q ss_pred CCCCCCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC------CcEE
Q 001057 748 NPCSKDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN------PFVV 821 (1170)
Q Consensus 748 ~p~~~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H------PNIV 821 (1170)
+....+.+.-.+|.+....|+|-||+|..|.+...|..||||+|...... ...-+.|++||++|+. -+++
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 33444566678999999999999999999999999999999999876533 2345789999999973 4789
Q ss_pred EEEeeeecccceEEEEeeccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-cE
Q 001057 822 RFFYSFTCRENLYLVMEYLNGGDLYSLLRNLG---CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-HI 897 (1170)
Q Consensus 822 rL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~---~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-~V 897 (1170)
+|+-.|...+++|||+|-+ ..+|.++|++.+ .|....++.|+.|++.||..|-..||+|.||||.|||++... .+
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCccee
Confidence 9999999999999999988 679999999876 488889999999999999999999999999999999998764 68
Q ss_pred EEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHH
Q 001057 898 KLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGII 977 (1170)
Q Consensus 898 KLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVI 977 (1170)
||||||.|..... .....+.-+..|.|||+|+|..|++..|+||+||+
T Consensus 577 KLCDfGSA~~~~e--------------------------------neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgct 624 (752)
T KOG0670|consen 577 KLCDFGSASFASE--------------------------------NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCT 624 (752)
T ss_pred eeccCcccccccc--------------------------------ccccHHHHHHhccCcceeecCcccCCccceeecee
Confidence 9999999875310 01112334668999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHhccCCCCCC------------------------------------------------
Q 001057 978 LFELLIGIPPFNAKTPQQIFDNIMNRDIPWPN------------------------------------------------ 1009 (1170)
Q Consensus 978 LYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~------------------------------------------------ 1009 (1170)
||||.||+..|.|.+...++...+..+-+||.
T Consensus 625 LYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~ 704 (752)
T KOG0670|consen 625 LYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSE 704 (752)
T ss_pred eEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHH
Confidence 99999999999999988887766543333331
Q ss_pred ------CCc---cCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 1010 ------IPE---EMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 1010 ------ip~---~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
++. .+-..+++||.+||..||++|++ +.++|.||||++
T Consensus 705 l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit---~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 705 LIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRIT---VNQALKHPFITE 751 (752)
T ss_pred HhccCCCCchhHHHHHHHHHHHHHHhccChhhcCC---HHHHhcCCcccC
Confidence 000 11235889999999999999999 778899999974
No 379
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-35 Score=315.02 Aligned_cols=263 Identities=31% Similarity=0.482 Sum_probs=211.3
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc------
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR------ 830 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~------ 830 (1170)
.+.|+-+.+||+|.||.||+|+.+.+|+.||+|++--.. .....-...++|+.||..+.|+|++.+++.+...
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 456888899999999999999999999999998653211 1222334568999999999999999988766432
Q ss_pred --cceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 831 --ENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 831 --~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
..+||||.+|+. +|.-+|.+. .+|+..+++.++.+++.||.|+|++.|+|||+|++|+||+.+|.+||+|||+|+.
T Consensus 95 ~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 95 DRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 349999999965 999999876 5799999999999999999999999999999999999999999999999999985
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCC
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~p 986 (1170)
+..... .........+-|.+|++||.++|. .|+++.|||..||||.||.+|.+
T Consensus 174 fs~~~n--------------------------~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp 227 (376)
T KOG0669|consen 174 FSTSKN--------------------------VVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP 227 (376)
T ss_pred eecccc--------------------------cCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence 421110 000112345679999999999975 59999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhc--cC---CCCCCC--------------Cc-------------cCCHHHHHHHHHhccCCCCCCC
Q 001057 987 PFNAKTPQQIFDNIMN--RD---IPWPNI--------------PE-------------EMSVEACDLIDKLLTENPVQRL 1034 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~--~~---l~fP~i--------------p~-------------~lS~eakDLIkkLLq~DPskRp 1034 (1170)
-|.+.+...++..|.. +. -.||++ +. .-.+++.||+.+||..||.+|+
T Consensus 228 imqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~ 307 (376)
T KOG0669|consen 228 IMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRI 307 (376)
T ss_pred cccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCc
Confidence 9999988877766642 11 123321 11 1245889999999999999999
Q ss_pred ChhhHHHHHcCCCCCC
Q 001057 1035 GATGAREVKQHPFFKN 1050 (1170)
Q Consensus 1035 Sa~~AeEILqHPfF~~ 1050 (1170)
. +.++++|.||..
T Consensus 308 ~---ad~alnh~~F~k 320 (376)
T KOG0669|consen 308 D---ADQALNHDFFWK 320 (376)
T ss_pred c---hHhhhchhhhhc
Confidence 8 788899999964
No 380
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=323.48 Aligned_cols=187 Identities=13% Similarity=0.065 Sum_probs=169.4
Q ss_pred cccccceeeecccccccccccccccCCcchhHHHHHHHHHHHHHh--cccCCCccCcccccccccCCCcccccccccCCC
Q 001057 494 CEVEIPVVHVEEHSRICTIADRCDLKSLTVNERLERVAETLEKIL--DSWSPKKHTKKRTHDDLNLMSPKQNSLSRQGSK 571 (1170)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~~~~QGd~ 571 (1170)
||++-|-. -..+.--++| ++|-+.|..|++.|++ -+|.|.+++ ..+++..++.+++|..+|+|||+
T Consensus 95 aE~~tp~~--------d~~~~~~~pK---d~e~~~~L~~a~r~~~LF~~Ld~eq~~-~v~dam~~~~v~~G~~Vi~qGde 162 (368)
T KOG1113|consen 95 AEEITPDD--------DEFKRKYIPK---DDETRRRLEEAFRKNLLFANLDDEQLS-QVLDAMFEKRVKAGETVIKQGDE 162 (368)
T ss_pred eeecCccc--------hhhhhcCCCC---CHHHHHHHHHHHHhccccccCCHHHHH-HHHHhhceeeecCCcEEEecCCc
Confidence 67777754 1223333444 5788899999999976 889885543 34999999999999999999999
Q ss_pred CCcceeecCCcEEEEEcCccccccCCCCCchHhhhh---hhcccccccCCCcccccCCchhhhhhhhhhhhhccCCCHHH
Q 001057 572 EMLDHVPDDDNAFVIEDLNVLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTPRTSQIELLVNGHRTITELQNPQQ 648 (1170)
Q Consensus 572 Gd~fYVie~G~~~v~~~~~~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ldR~~~~~~~~~tfr~Il~~~~~~k 648 (1170)
||+||||++|++||||+|+.|+++++|++||||||| ||||||+|+|+++||+||| .|||+|+|.++.+|
T Consensus 163 Gd~fYvI~kGt~dVyv~~~~v~~~~~g~sFGElALmyn~PRaATv~a~t~~klWgldr--------~SFrrIi~~s~~kk 234 (368)
T KOG1113|consen 163 GDNFYVIDKGTFDVYVNGTYVTTYSPGGSFGELALMYNPPRAATVVAKSLKKLWGLDR--------TSFRRIIMKSCIKK 234 (368)
T ss_pred CCcEEEEecceEEEEECCeEEeeeCCCCchhhhHhhhCCCcccceeeccccceEEEee--------ceeEEEeeccchhh
Confidence 999999999999999999999999999999999999 9999999999999999999 99999999999999
Q ss_pred HHHHHHHhhccccCCCCCHHHHHHHHHHHHHHHH------HHhccccCcEEeeeehhh
Q 001057 649 IKKLLDVSRSIASVNDCDYNSLEHMLDRLEELKY------IIQDRKVDALFVETFGRR 700 (1170)
Q Consensus 649 r~~y~~fl~~V~~l~~l~~~el~klADaLe~~~f------IiqgekgD~FyI~~~G~R 700 (1170)
|+||++||+++|+|++|+.|++.+|+|++.++.| |.+++.||.||++.+|..
T Consensus 235 rkMy~~~l~s~pil~~l~k~er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEv 292 (368)
T KOG1113|consen 235 RKMYEPFLESVPILESLEKLERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEV 292 (368)
T ss_pred hhhhhhhhhcchhhHHHHHHHHHhhhcccceeeccCCceEEeccCCcceEEEeccccc
Confidence 9999999999999999999999999999999999 778899999999999984
No 381
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.2e-32 Score=323.41 Aligned_cols=265 Identities=21% Similarity=0.308 Sum_probs=191.0
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeec----------------CCCCEEEEEEeeccccccH-----------HHHHHH
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKR----------------ATGDLFAIKVLKKADMIRK-----------NAVESI 805 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk----------------~TGe~VAIKvLkKs~i~~~-----------~~ve~~ 805 (1170)
.....++|++.++||+|+||+||+|... ..++.||||.+........ ...+..
T Consensus 140 ~r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~ 219 (507)
T PLN03224 140 SRWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETG 219 (507)
T ss_pred CCccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchh
Confidence 3456789999999999999999999642 3456899999864321100 011233
Q ss_pred HHHHHHHHhcCCCcE-----EEEEeeeec--------ccceEEEEeeccCCChHHHHHhcC-------------------
Q 001057 806 LAERNILISVRNPFV-----VRFFYSFTC--------RENLYLVMEYLNGGDLYSLLRNLG------------------- 853 (1170)
Q Consensus 806 l~EieILskL~HPNI-----VrL~~~Fqd--------~~~LyLVMEY~~GGSL~dlLk~~~------------------- 853 (1170)
..|+.++.+++|.++ ++++++|.. ....+|||||+++|+|.+++....
T Consensus 220 ~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~ 299 (507)
T PLN03224 220 MVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD 299 (507)
T ss_pred HHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence 457777777776654 556665542 356899999999999999886421
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccc
Q 001057 854 -----CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLV 928 (1170)
Q Consensus 854 -----~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~ 928 (1170)
.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||++..... +
T Consensus 300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~-------------~---- 362 (507)
T PLN03224 300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCT-------------G---- 362 (507)
T ss_pred hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCcccccc-------------C----
Confidence 235567888999999999999999999999999999999999999999999864210 0
Q ss_pred cccccCCCCCcccccccccccCCCCCCchHHHhcCC--------------------CC--cchhhhHHHHHHHHHHhCCC
Q 001057 929 NDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG--------------------HG--ATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 929 ~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~--------------------ys--~ksDIWSLGVILYELLTG~p 986 (1170)
.........+|+.|+|||++.... |+ ...||||+|||+|+|++|..
T Consensus 363 ------------~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l 430 (507)
T PLN03224 363 ------------INFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPEL 430 (507)
T ss_pred ------------CccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCC
Confidence 000011223589999999986432 22 24799999999999999875
Q ss_pred -CCCCCCH-----------HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCC---CCCCChhhHHHHHcCCCCCC
Q 001057 987 -PFNAKTP-----------QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENP---VQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 987 -PF~g~~~-----------~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DP---skRpSa~~AeEILqHPfF~~ 1050 (1170)
||.+... ...+..+....+.++. ....+..++|||.+||..+| .+|++ |.|+|+||||..
T Consensus 431 ~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~-~d~~s~~~~dLi~~LL~~~~~~~~~RlS---a~eaL~Hp~f~~ 505 (507)
T PLN03224 431 RPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSL-LDRNKEAGWDLACKLITKRDQANRGRLS---VGQALSHRFFLP 505 (507)
T ss_pred CCccchhhhhhHHhhccchHHHHHhhcccCCCccc-ccccChHHHHHHHHHhccCCCCcccCCC---HHHHhCCCCcCC
Confidence 7754221 1112222333444442 34678999999999999876 68999 889999999964
No 382
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=340.06 Aligned_cols=250 Identities=22% Similarity=0.404 Sum_probs=211.3
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCC-C----CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRAT-G----DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC 829 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~T-G----e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd 829 (1170)
+....-++.+.||+|.||.||.|....- | ..||||.+.+. .+...+..|++|..+|+.++|||||++++++.+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 4556788899999999999999987542 2 24899988764 356778899999999999999999999999999
Q ss_pred ccceEEEEeeccCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEec
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNL-------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDF 902 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~-------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDF 902 (1170)
....+|++|||.||||..+|++. ..++......++.+|+.|.+||+++++|||||-..|+||+....|||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 99999999999999999999875 24888899999999999999999999999999999999999999999999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELL 982 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL 982 (1170)
|+|+... .. .++ ..... ..--..|||||.+....++.++|||||||+|||++
T Consensus 847 GlArDiy--~~-----------~yy-----------r~~~~----a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEif 898 (1025)
T KOG1095|consen 847 GLARDIY--DK-----------DYY-----------RKHGE----AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIF 898 (1025)
T ss_pred chhHhhh--hc-----------hhe-----------eccCc----cccceecCCHHHHhhcccccccchhhhHHHHHHHH
Confidence 9999421 00 000 00000 01124799999999999999999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHhccC-CCCCCCCccCCHHHHHHHHHhccCCCCCCCChh
Q 001057 983 I-GIPPFNAKTPQQIFDNIMNRD-IPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT 1037 (1170)
Q Consensus 983 T-G~pPF~g~~~~ei~qkIl~~~-l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~ 1037 (1170)
+ |..||.+.+..+++...+.+. ++. |..++..+.+++..|++.+|++||+..
T Consensus 899 slG~~PY~~~~n~~v~~~~~~ggRL~~---P~~CP~~ly~lM~~CW~~~pe~RP~F~ 952 (1025)
T KOG1095|consen 899 SLGATPYPSRSNFEVLLDVLEGGRLDP---PSYCPEKLYQLMLQCWKHDPEDRPSFR 952 (1025)
T ss_pred hCCCCCCCCcchHHHHHHHHhCCccCC---CCCCChHHHHHHHHHccCChhhCccHH
Confidence 8 999999999999988666554 333 478999999999999999999999943
No 383
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=309.69 Aligned_cols=256 Identities=29% Similarity=0.492 Sum_probs=211.5
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc---
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRE--- 831 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~--- 831 (1170)
....+|.-++.+|.|.- .|..|-+..+++.||+|.+.... .......+..+|..++..+.|+||++++.+|.-..
T Consensus 14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf-~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF-QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc-ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence 34568999999999999 78889999999999999887652 22334456788999999999999999999997543
Q ss_pred ---ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccc
Q 001057 832 ---NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVG 908 (1170)
Q Consensus 832 ---~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~ 908 (1170)
.+|+||||| ..+|...+.. .+.-..+.+++.|+++|++|||+.||+||||||+||++..++.+||.|||+|+..
T Consensus 92 ~~~e~y~v~e~m-~~nl~~vi~~--elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 92 EFQEVYLVMELM-DANLCQVILM--ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHhHHHHHHhh-hhHHHHHHHH--hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 589999999 5699988873 4777889999999999999999999999999999999999999999999999842
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
. .......++.|..|.|||++.+.+|...+||||+|||+.||++|...|
T Consensus 169 ~-------------------------------~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf 217 (369)
T KOG0665|consen 169 D-------------------------------TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF 217 (369)
T ss_pred C-------------------------------cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence 1 011334578999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHhcc---------------------------CCC----CCC-----C---CccCCHHHHHHHHHhccCC
Q 001057 989 NAKTPQQIFDNIMNR---------------------------DIP----WPN-----I---PEEMSVEACDLIDKLLTEN 1029 (1170)
Q Consensus 989 ~g~~~~ei~qkIl~~---------------------------~l~----fP~-----i---p~~lS~eakDLIkkLLq~D 1029 (1170)
.|.+.-+++.++... .+. ||+ . +..-+..+++|+.+||..|
T Consensus 218 ~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~ 297 (369)
T KOG0665|consen 218 PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID 297 (369)
T ss_pred cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence 998766555554320 011 111 0 1123567999999999999
Q ss_pred CCCCCChhhHHHHHcCCCCC
Q 001057 1030 PVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 1030 PskRpSa~~AeEILqHPfF~ 1049 (1170)
|++|.+ ++++|.||||+
T Consensus 298 pe~Ris---v~daL~HPY~~ 314 (369)
T KOG0665|consen 298 PEKRIS---VDDALRHPYIK 314 (369)
T ss_pred hhhccc---HHHHhcCCeee
Confidence 999999 89999999998
No 384
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-34 Score=304.79 Aligned_cols=261 Identities=25% Similarity=0.455 Sum_probs=212.4
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh-cCCCcEEEEEeeeecccc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILIS-VRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILsk-L~HPNIVrL~~~Fqd~~~ 832 (1170)
.+..++.+-+..||.|+||+|++..++.+|+..|+|.++.... .....+++.|.+...+ -+.||||++|++...++.
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD 137 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc
Confidence 4555667778899999999999999999999999999987653 4455677788776554 568999999999888888
Q ss_pred eEEEEeeccCCChHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEEEEecCCcc
Q 001057 833 LYLVMEYLNGGDLYSLLR-----NLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIKLTDFGLSK 906 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk-----~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VKLsDFGLAk 906 (1170)
.+|.||+| ..+|..+-+ ....++|...-.+..-.+.||+||-. ..||||||||+||||+..|.|||||||.|.
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence 99999999 446655443 23569998888888889999999995 589999999999999999999999999986
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc--CCCCcchhhhHHHHHHHHHHhC
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG--MGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g--~~ys~ksDIWSLGVILYELLTG 984 (1170)
... ..-....-+|...|||||.+.. .+|+-++|+||||++|||++||
T Consensus 217 qLv-------------------------------~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 217 QLV-------------------------------DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred hHH-------------------------------HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 431 0111223468899999999963 4689999999999999999999
Q ss_pred CCCCCCCCH-HHHHHHHhccCCCCCCCCc---cCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 985 IPPFNAKTP-QQIFDNIMNRDIPWPNIPE---EMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 985 ~pPF~g~~~-~ei~qkIl~~~l~fP~ip~---~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..||.+.+. .+++..+..+..+....+. ..+..++.||..||.+|-+.||. ..+++++||++-.
T Consensus 266 ~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpk---y~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 266 NFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPK---YDDLKKFPFYRMY 333 (361)
T ss_pred CCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcc---hhhhhcCchhhhh
Confidence 999988654 4566666667655433233 48999999999999999999998 7899999999754
No 385
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.3e-34 Score=332.71 Aligned_cols=274 Identities=42% Similarity=0.753 Sum_probs=243.7
Q ss_pred EeccCCCeEEEEeee---cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEEeec
Q 001057 765 PISQGAFGRVFLARK---RATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVMEYL 840 (1170)
Q Consensus 765 ~LG~GgFGtVyLArd---k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVMEY~ 840 (1170)
.+|.|+||.|++++. ...|..||+|++++......... +...|..++..++ ||++|++++.|+.+..+|++++|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999999865 35678999999988765444333 7778999999998 999999999999999999999999
Q ss_pred cCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCC
Q 001057 841 NGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPS 920 (1170)
Q Consensus 841 ~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~s 920 (1170)
.||+|+..+.....+.+...++|.++++.|++++|+.||+|||+|++||+++.+|++++.|||+++...
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v----------- 148 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV----------- 148 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhH-----------
Confidence 999999999998899999999999999999999999999999999999999999999999999998632
Q ss_pred CCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 001057 921 LGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNI 1000 (1170)
Q Consensus 921 l~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkI 1000 (1170)
.....|||..|||||++. ++..++||||+|+++|||++|..||.+ ++...|
T Consensus 149 -----------------------~~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~I 199 (612)
T KOG0603|consen 149 -----------------------KEKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRI 199 (612)
T ss_pred -----------------------hhhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHH
Confidence 001129999999999998 788999999999999999999999998 777888
Q ss_pred hccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCCh--hhHHHHHcCCCCCCCChhhhhhc--cCCCCCCCCC-CCCCcc
Q 001057 1001 MNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGA--TGAREVKQHPFFKNINWDTLARQ--KAMFIPAAES-LDTSYF 1075 (1170)
Q Consensus 1001 l~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa--~~AeEILqHPfF~~idwe~L~~~--~ppfiP~~~s-lDts~F 1075 (1170)
....+.+| ..++.++++++..|+..+|.+|++. .++.++++|+||+.++|..+..+ .++|+|.... .++.+|
T Consensus 200 l~~~~~~p---~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~f 276 (612)
T KOG0603|consen 200 LKAELEMP---RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQF 276 (612)
T ss_pred hhhccCCc---hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhc
Confidence 88777666 7899999999999999999999985 58999999999999999988776 7889998877 788999
Q ss_pred ccccccC
Q 001057 1076 VSRYVWN 1082 (1170)
Q Consensus 1076 ~s~~~~~ 1082 (1170)
+.+|+..
T Consensus 277 d~eft~~ 283 (612)
T KOG0603|consen 277 DPEFTSQ 283 (612)
T ss_pred CchhccC
Confidence 9877643
No 386
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=8.2e-33 Score=292.44 Aligned_cols=253 Identities=29% Similarity=0.524 Sum_probs=205.5
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc--c
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRE--N 832 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~--~ 832 (1170)
..++|++++++|+|.|+.||.|++..+++.++||+++.- ....+.+|+.||..|. ||||++|++...+.. .
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 457899999999999999999999999999999998753 2357889999999998 999999999988764 4
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC-CcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD-GHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d-G~VKLsDFGLAk~~~~~ 911 (1170)
..||+||+++.+...+.. .|+...+++|+.|++.||.|||++||+|||+||.|++||.. -.++|+|+|||.+.-
T Consensus 110 paLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH-- 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH-- 184 (338)
T ss_pred chhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC--
Confidence 789999998877766554 48888999999999999999999999999999999999975 479999999998631
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCC-
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFN- 989 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~- 989 (1170)
.+..-+..+.+..|--||.+..- .|+++-|+|||||+|..|+..+-||.
T Consensus 185 -----------------------------p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFh 235 (338)
T KOG0668|consen 185 -----------------------------PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235 (338)
T ss_pred -----------------------------CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccC
Confidence 11122345678889999999764 58999999999999999999988874
Q ss_pred CCCHHHHHHHHhc-------------cC----------------CCCCCC-----CccCCHHHHHHHHHhccCCCCCCCC
Q 001057 990 AKTPQQIFDNIMN-------------RD----------------IPWPNI-----PEEMSVEACDLIDKLLTENPVQRLG 1035 (1170)
Q Consensus 990 g~~~~ei~qkIl~-------------~~----------------l~fP~i-----p~~lS~eakDLIkkLLq~DPskRpS 1035 (1170)
|.+..+++-+|.+ -. .+|..+ ..-.++++.|||.++|.+|..+|+|
T Consensus 236 G~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT 315 (338)
T KOG0668|consen 236 GHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT 315 (338)
T ss_pred CCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc
Confidence 5554444333321 00 111111 1235799999999999999999999
Q ss_pred hhhHHHHHcCCCCCCC
Q 001057 1036 ATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1036 a~~AeEILqHPfF~~i 1051 (1170)
|+|++.||||..+
T Consensus 316 ---akEam~HpyF~~~ 328 (338)
T KOG0668|consen 316 ---AKEAMAHPYFAPV 328 (338)
T ss_pred ---hHHHhcCchHHHH
Confidence 8899999999764
No 387
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.98 E-value=6.9e-32 Score=338.53 Aligned_cols=240 Identities=23% Similarity=0.310 Sum_probs=186.4
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
.|.....||+|+||.||+|++..++..||+|.+...... ...|+.++.+++|||||++++++.+....|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 456667899999999999999999999999988653321 1245788999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLH---SLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLH---s~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|+++|+|.++++. +++..+..++.||+.||+||| +.+|+||||||+|||++.++..++. ||.+....
T Consensus 764 y~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~------ 833 (968)
T PLN00113 764 YIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC------ 833 (968)
T ss_pred CCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc------
Confidence 9999999999964 889999999999999999999 6699999999999999998888775 66543210
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCC---
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKT--- 992 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~--- 992 (1170)
......||+.|||||++.+..|+.++|||||||++|||++|+.||....
T Consensus 834 ----------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~ 885 (968)
T PLN00113 834 ----------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVH 885 (968)
T ss_pred ----------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCC
Confidence 0112368899999999999899999999999999999999999995421
Q ss_pred --HHHHHHHHhcc-C---CCCCC------CCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 993 --PQQIFDNIMNR-D---IPWPN------IPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 993 --~~ei~qkIl~~-~---l~fP~------ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
..+........ . ..-|. .+.....++.+++.+|++.||.+||++.++.+.+
T Consensus 886 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L 948 (968)
T PLN00113 886 GSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948 (968)
T ss_pred CcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHH
Confidence 11111111100 0 00011 1112234577899999999999999965554444
No 388
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-33 Score=300.43 Aligned_cols=260 Identities=30% Similarity=0.506 Sum_probs=212.4
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc-----cce
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR-----ENL 833 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~-----~~L 833 (1170)
+.+.-+.||.|+||+||.+.+..+|+.||+|.+..- ...-...+.+.+|+.+|..++|.|++..++..+.. ..+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 445557899999999999999999999999987643 22334567899999999999999999988776654 247
Q ss_pred EEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 834 YLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
|+|.|+|. .+|..+|-.-..++.+.++.+++||+.||+|||+.||+||||||.|+|++.+..+||||||+|+.-. .
T Consensus 133 YV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee---~ 208 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWD---Q 208 (449)
T ss_pred HHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccc---h
Confidence 89999995 5999999888899999999999999999999999999999999999999999999999999998521 0
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.....+...+-|-+|+|||++.|. .|+.++||||+|||+.|||..+..|...+
T Consensus 209 --------------------------d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~ 262 (449)
T KOG0664|consen 209 --------------------------RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAG 262 (449)
T ss_pred --------------------------hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccC
Confidence 111222334568899999999985 48999999999999999999999999988
Q ss_pred HHHHHHHHhc-----------------------cCCCCCCC--------CccCCHHHHHHHHHhccCCCCCCCChhhHHH
Q 001057 993 PQQIFDNIMN-----------------------RDIPWPNI--------PEEMSVEACDLIDKLLTENPVQRLGATGARE 1041 (1170)
Q Consensus 993 ~~ei~qkIl~-----------------------~~l~fP~i--------p~~lS~eakDLIkkLLq~DPskRpSa~~AeE 1041 (1170)
+-+.++.|.. +...-|.. +..-..++.+++.+||..||.+|.+ ..+
T Consensus 263 PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris---~~~ 339 (449)
T KOG0664|consen 263 PIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRIS---VEE 339 (449)
T ss_pred hHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCccccc---Hhh
Confidence 8777776642 12222222 1234567889999999999999998 778
Q ss_pred HHcCCCCCCCC
Q 001057 1042 VKQHPFFKNIN 1052 (1170)
Q Consensus 1042 ILqHPfF~~id 1052 (1170)
.+.|++..+..
T Consensus 340 A~~~~~~~e~R 350 (449)
T KOG0664|consen 340 ALQHRYLEEGR 350 (449)
T ss_pred hcccccccccc
Confidence 89999987654
No 389
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.97 E-value=3.5e-32 Score=330.11 Aligned_cols=268 Identities=52% Similarity=0.894 Sum_probs=224.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|..++.|.-|+||.||+++++.+.+.+|+|+ .+..+.-+ +||....+|++|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lilR----------nilt~a~npfvv-------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLILR----------NILTFAGNPFVV-------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhhh----------ccccccCCccee--------------
Confidence 45789999999999999999999999999999965 33322111 155555666666
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
||=..+++..+.++.+. +.+++|||+.||+|||+||+|+||+.-|++|++|||+++........
T Consensus 136 -------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at- 199 (1205)
T KOG0606|consen 136 -------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT- 199 (1205)
T ss_pred -------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc-
Confidence 56666777777777655 78999999999999999999999999999999999999864311110
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
.+....+.. ..........||||.|+||||+...+|+..+|||+||+|+||.|.|+.||.++++++
T Consensus 200 ----------nl~eg~I~k----~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee 265 (1205)
T KOG0606|consen 200 ----------NLKEGHIEK----DTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE 265 (1205)
T ss_pred ----------hhhhcchHH----HHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH
Confidence 011111110 122334556799999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhhhccCCCCCCCCC-CCCCc
Q 001057 996 IFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLARQKAMFIPAAES-LDTSY 1074 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~~~~ppfiP~~~s-lDts~ 1074 (1170)
++..++...+.||+-...++++++++|.+||+.+|..|++..++.++++|+||+.+||..|..+++.|+|...+ .|+.|
T Consensus 266 lfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~llRqkaefvpql~~eddtsy 345 (1205)
T KOG0606|consen 266 LFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLLRQKAEFVPQLESEDDTSY 345 (1205)
T ss_pred HHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhhhhhccccccccccccchh
Confidence 99999999999998777899999999999999999999998899999999999999999999999999999988 78999
Q ss_pred cccc
Q 001057 1075 FVSR 1078 (1170)
Q Consensus 1075 F~s~ 1078 (1170)
|+++
T Consensus 346 fdTR 349 (1205)
T KOG0606|consen 346 FDTR 349 (1205)
T ss_pred hccc
Confidence 9885
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=318.09 Aligned_cols=250 Identities=30% Similarity=0.445 Sum_probs=196.7
Q ss_pred eEEEEEeccCCCeE-EEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEE
Q 001057 760 FEIIKPISQGAFGR-VFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 760 Yevlk~LG~GgFGt-VyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
|.--+.+|.|+-|+ ||+|.. .|+.||||.+-. .-..-..+|+..|+..+ |||||++|+.-++.+.+||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 33445689999886 788875 588999997643 23345678999998875 999999999999999999999
Q ss_pred eeccCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC---CC--cEEEEecCCcccc
Q 001057 838 EYLNGGDLYSLLRNLG----CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ---DG--HIKLTDFGLSKVG 908 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~----~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~---dG--~VKLsDFGLAk~~ 908 (1170)
|.|. .+|.+++.... .......+..+.|++.||++||+.+||||||||.||||+. ++ .++|+|||+|+..
T Consensus 583 ELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9995 59999998741 1111345778899999999999999999999999999976 34 6899999999964
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhC-CCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIG-IPP 987 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG-~pP 987 (1170)
. .+- ..-....+..||-+|+|||++....-..++|||||||++|+.++| ..|
T Consensus 662 ~-------------~~~--------------sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~Hp 714 (903)
T KOG1027|consen 662 A-------------GGK--------------SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHP 714 (903)
T ss_pred C-------------CCc--------------chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccC
Confidence 2 010 011124567899999999999998888899999999999999985 999
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 988 FNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 988 F~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
|...-.. -.+|+++....-.+......++.|||.+||+++|..||+ |.++|.||||-.
T Consensus 715 FGd~~~R--~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPs---a~~VL~HPlFW~ 772 (903)
T KOG1027|consen 715 FGDSLER--QANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPS---ATDVLNHPLFWD 772 (903)
T ss_pred CCchHHh--hhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCC---HHHHhCCCccCC
Confidence 9764433 346777665543332222229999999999999999999 889999999953
No 391
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=2.4e-31 Score=306.92 Aligned_cols=205 Identities=27% Similarity=0.508 Sum_probs=182.0
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHH-----HHHHHHHHHHHhcC---CCcEEEEEe
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAV-----ESILAERNILISVR---NPFVVRFFY 825 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~v-----e~~l~EieILskL~---HPNIVrL~~ 825 (1170)
-....+|..++.+|.|+||.|++|.++.+...|+||.+.|.++.-...+ -.+--|+.||..++ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 3456789999999999999999999999999999999998776544333 24567999999998 999999999
Q ss_pred eeecccceEEEEeecc-CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 826 SFTCRENLYLVMEYLN-GGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 826 ~Fqd~~~LyLVMEY~~-GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
+|++++++||+||... |-+|+++|..+..++|.+++.+++||+.|+++||+.||||||||-+|+.++.+|-+||+|||.
T Consensus 637 fFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 637 FFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred eeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 9999999999999864 569999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCC-CcchhhhHHHHHHHHHHh
Q 001057 905 SKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGH-GATADWWSVGIILFELLI 983 (1170)
Q Consensus 905 Ak~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~y-s~ksDIWSLGVILYELLT 983 (1170)
|... .......++||..|.|||++.|..| +..-|||+||++||.++.
T Consensus 717 aa~~--------------------------------ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivy 764 (772)
T KOG1152|consen 717 AAYT--------------------------------KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVY 764 (772)
T ss_pred hhhh--------------------------------cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEe
Confidence 8642 1112346899999999999999887 677899999999999999
Q ss_pred CCCCCCC
Q 001057 984 GIPPFNA 990 (1170)
Q Consensus 984 G~pPF~g 990 (1170)
...||+.
T Consensus 765 kenpyyn 771 (772)
T KOG1152|consen 765 KENPYYN 771 (772)
T ss_pred ccCCCcC
Confidence 9999974
No 392
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=300.04 Aligned_cols=254 Identities=24% Similarity=0.355 Sum_probs=208.4
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
+......+.++||+|-||.|.+|... .+..||+|+++... .......|..|+.+|.+|+|||||+|+++|..++.+|
T Consensus 535 fPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a--~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic 611 (807)
T KOG1094|consen 535 FPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDA--TKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC 611 (807)
T ss_pred cchhheehhhhhcCcccceeEEEEec-CceEEEEeecCccc--chhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence 34456788899999999999999864 36899999987653 3455688999999999999999999999999999999
Q ss_pred EEEeeccCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLG--CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~--~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~ 912 (1170)
||||||+.|+|.+++..+. .+.......++.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++...
T Consensus 612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly--- 688 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLY--- 688 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccc---
Confidence 9999999999999998873 33455566799999999999999999999999999999999999999999998532
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHH--hCCCCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELL--IGIPPFNA 990 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL--TG~pPF~g 990 (1170)
++.++ +.....+-...|||+|.|.-..++.++|+|+||++||||+ +...||..
T Consensus 689 ----------sg~yy---------------~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~ 743 (807)
T KOG1094|consen 689 ----------SGDYY---------------RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQ 743 (807)
T ss_pred ----------cCCce---------------eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhh
Confidence 11111 0011123346899999999999999999999999999986 58899998
Q ss_pred CCHHHHHHHHhc-----cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 991 KTPQQIFDNIMN-----RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 991 ~~~~ei~qkIl~-----~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.+.+++.++... +.-..+..|.-++..+..|+.+|+..|-.+||+.+.+
T Consensus 744 lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l 797 (807)
T KOG1094|consen 744 LTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL 797 (807)
T ss_pred hhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence 888877766542 1112334457789999999999999999999995443
No 393
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=301.05 Aligned_cols=257 Identities=23% Similarity=0.380 Sum_probs=217.1
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
.+..+..+||-|.||.||.|.++.-.-.||||.++.. .-.++.|+.|..+|+.++|||+|+|+++|....-+|||.
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 3566778999999999999999999999999998754 346789999999999999999999999999999999999
Q ss_pred eeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 838 EYLNGGDLYSLLRNLGC--LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~--LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
|||..|+|.+||++..+ ++.-...+++.||..|++||..+++|||||-..|+|+..+..||++||||+++.. ..+
T Consensus 343 EfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMt-gDT-- 419 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMT-GDT-- 419 (1157)
T ss_pred ecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhc-CCc--
Confidence 99999999999987643 6666667777899999999999999999999999999999999999999999631 000
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCCHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKTPQ 994 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~~~ 994 (1170)
++... ..--..-|.|||-|....++.++|||+|||+|||+.| |..||.|.+..
T Consensus 420 ----------------------YTAHA----GAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS 473 (1157)
T KOG4278|consen 420 ----------------------YTAHA----GAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 473 (1157)
T ss_pred ----------------------eeccc----CccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH
Confidence 00000 0011346999999998899999999999999999997 99999999999
Q ss_pred HHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 995 QIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 995 ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
+.|..+.++-.- .-|..+++.+..|+..|+++.|..||++.++.+.++.-|-.
T Consensus 474 qVY~LLEkgyRM--~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 474 QVYGLLEKGYRM--DGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHHHHHhccccc--cCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 998877665432 23579999999999999999999999977777666665543
No 394
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.97 E-value=7.2e-31 Score=310.41 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=216.5
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCC---CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATG---DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TG---e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
.+....-.+.++||.|.||.||.|+.+..| ..||||.++.. ...++...|+.|..||-+++||||++|-++....
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks 702 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKS 702 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecC
Confidence 345566789999999999999999998766 48999999864 3567778999999999999999999999999999
Q ss_pred cceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
.-++||.|||++|+|..+|+.+ +.|+.-+..-+++.|+.|++||-++|+|||||-..|||++.+-.+|++||||++..-
T Consensus 703 ~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle 782 (996)
T KOG0196|consen 703 KPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 782 (996)
T ss_pred ceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence 9999999999999999999876 569999999999999999999999999999999999999999999999999998531
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccC---CCCCCchHHHhcCCCCcchhhhHHHHHHHHHH-hCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAG---TPDYLAPEILLGMGHGATADWWSVGIILFELL-IGI 985 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vG---Tp~YmAPEVL~g~~ys~ksDIWSLGVILYELL-TG~ 985 (1170)
++. ...++..| ...|.|||.|....++.++|+||+|++|||.+ .|.
T Consensus 783 ----dd~--------------------------~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE 832 (996)
T KOG0196|consen 783 ----DDP--------------------------EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 832 (996)
T ss_pred ----cCC--------------------------CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence 110 01111111 24799999999999999999999999999977 599
Q ss_pred CCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 986 PPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 986 pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
.||..++.++.+..|..+-. +|. |-+++..+-.|+..|+++|-.+||.+.++
T Consensus 833 RPYWdmSNQdVIkaIe~gyR-LPp-PmDCP~aL~qLMldCWqkdR~~RP~F~qi 884 (996)
T KOG0196|consen 833 RPYWDMSNQDVIKAIEQGYR-LPP-PMDCPAALYQLMLDCWQKDRNRRPKFAQI 884 (996)
T ss_pred CcccccchHHHHHHHHhccC-CCC-CCCCcHHHHHHHHHHHHHHhhcCCCHHHH
Confidence 99999999999999986543 331 46899999999999999999999995443
No 395
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-30 Score=301.65 Aligned_cols=250 Identities=24% Similarity=0.373 Sum_probs=205.2
Q ss_pred eEEEEEeccCCCeEEEEeeecCC----CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 760 FEIIKPISQGAFGRVFLARKRAT----GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~T----Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..+.++||.|-||.||.|..... .--||||..++.. .....+.|+.|.-||++++|||||+|++++.+ ...+|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 34456899999999999986432 3368999887654 23447899999999999999999999999875 45789
Q ss_pred EEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCC
Q 001057 836 VMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~ 914 (1170)
|||+++-|.|..+|+.+ ..++......|+.||+.||.|||+..+|||||-..|||+.....|||+||||++...
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e----- 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE----- 542 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc-----
Confidence 99999999999999865 468988999999999999999999999999999999999999999999999998531
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccccccccc-cCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSV-AGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~-vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.......+. .-..-|||||-+.-..++.++|||.|||+|||+|. |..||.+-.
T Consensus 543 -------------------------d~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk 597 (974)
T KOG4257|consen 543 -------------------------DDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK 597 (974)
T ss_pred -------------------------ccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc
Confidence 000000110 11246999999988899999999999999999986 999999988
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
..+.+-.|.++... .+|.++++.+..|+.+|+.++|.+||....+..+|.
T Consensus 598 NsDVI~~iEnGeRl--P~P~nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 598 NSDVIGHIENGERL--PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred ccceEEEecCCCCC--CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 77777777666532 356899999999999999999999999655544443
No 396
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=305.05 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=211.2
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCC-C--CEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRAT-G--DLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCR 830 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~T-G--e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~ 830 (1170)
-+..++..+.++||.|+||+|+.|.+... | -.||||+++..... .....|++|+.+|.+|+|||+|+||++..+
T Consensus 106 lIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~--~~mddflrEas~M~~L~H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 106 LIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN--AIMDDFLREASHMLKLQHPHLIRLYGVVLD- 182 (1039)
T ss_pred eccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc--hhHHHHHHHHHHHHhccCcceeEEeeeecc-
Confidence 34556777888999999999999988642 3 47999999865432 267899999999999999999999999887
Q ss_pred cceEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccc
Q 001057 831 ENLYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVG 908 (1170)
Q Consensus 831 ~~LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~ 908 (1170)
..+.||||+++.|+|.+.|++. ..|.....-.|+.||+.|+.||..+++|||||-..||||-....||||||||.+..
T Consensus 183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceecc
Confidence 7788999999999999999872 45888888899999999999999999999999999999999999999999999854
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPP 987 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pP 987 (1170)
..... .|. .....---..|+|||.|....++.++|+|++||++|||++ |.-|
T Consensus 263 g~ned------------~Yv---------------m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEeP 315 (1039)
T KOG0199|consen 263 GENED------------MYV---------------MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEP 315 (1039)
T ss_pred CCCCc------------ceE---------------ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCC
Confidence 21110 000 0000111347999999999999999999999999999997 8999
Q ss_pred CCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhH
Q 001057 988 FNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGA 1039 (1170)
Q Consensus 988 F~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~A 1039 (1170)
|.|....+++++|-.+.. + .-|..++.++.++++.|+..+|..||++..+
T Consensus 316 W~G~~g~qIL~~iD~~er-L-pRPk~csedIY~imk~cWah~paDRptFsai 365 (1039)
T KOG0199|consen 316 WVGCRGIQILKNIDAGER-L-PRPKYCSEDIYQIMKNCWAHNPADRPTFSAI 365 (1039)
T ss_pred CCCCCHHHHHHhcccccc-C-CCCCCChHHHHHHHHHhccCCccccccHHHH
Confidence 999999999999985442 2 2357899999999999999999999996544
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=313.22 Aligned_cols=260 Identities=31% Similarity=0.516 Sum_probs=226.0
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEE
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyL 835 (1170)
..++|+++..+|.|+||.||+++++.+++..|+|+++-.. .....-+..|+-+++.++|||||.+++.|...+.++|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwi 89 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWI 89 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecCCCcChHHHHhhhhhhcCcEE
Confidence 3468999999999999999999999999999999987543 2344567789999999999999999999999999999
Q ss_pred EEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 836 VMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 836 VMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
.||||.||+|.+.-+-.+.+++.++.+..++.+.||+|||+.|=+|||||-.|||+++.|.+||+|||.+-.+.
T Consensus 90 cMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqit------ 163 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQIT------ 163 (829)
T ss_pred EEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhh------
Confidence 99999999999988888999999999999999999999999999999999999999999999999999875421
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh---cCCCCcchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL---GMGHGATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~---g~~ys~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
..-.+..++.|||+|||||+-. ..+|+..+|||++|++..|+..-++|.....
T Consensus 164 ------------------------ati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 164 ------------------------ATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred ------------------------hhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 1123456789999999999863 5689999999999999999999999988777
Q ss_pred HHHHHHHHhccCCCCCCC--CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 993 PQQIFDNIMNRDIPWPNI--PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~i--p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
++......-+..+..|.+ +...++.+-+|++.+|.++|.+||+ ++.+|.|||....
T Consensus 220 pmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRpt---aeklL~h~fvs~~ 277 (829)
T KOG0576|consen 220 PMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPT---AEKLLQHPFVSQT 277 (829)
T ss_pred hHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCC---hhhheeceeeccc
Confidence 776665555555554443 2467899999999999999999999 7788999998764
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=6.5e-29 Score=245.72 Aligned_cols=212 Identities=43% Similarity=0.744 Sum_probs=184.9
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEeeccCCCh
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDL 845 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL 845 (1170)
||.|++|.||++....+++.+++|++....... ....+.+|+.++..+.|++|+++++++......+++|||+.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653211 356788999999999999999999999998999999999999999
Q ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCccccccccCCCCCCCCCCC
Q 001057 846 YSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKVGLIHSTDDLSAPSLGS 923 (1170)
Q Consensus 846 ~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s 923 (1170)
..++... ..++...+..++.+++.+|.|||+.|++|+||+|.||+++. ++.++|+|||.+......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~------------ 146 (215)
T cd00180 79 KDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSD------------ 146 (215)
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCC------------
Confidence 9999876 56899999999999999999999999999999999999999 899999999998752100
Q ss_pred CCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Q 001057 924 GGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMN 1002 (1170)
Q Consensus 924 ~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~ 1002 (1170)
........++..|++||.+... .++.+.|+|+||+++|+|
T Consensus 147 ------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------- 187 (215)
T cd00180 147 ------------------KSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------- 187 (215)
T ss_pred ------------------cchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence 0012234578899999999877 788999999999999999
Q ss_pred cCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCC
Q 001057 1003 RDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHP 1046 (1170)
Q Consensus 1003 ~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHP 1046 (1170)
..+.++|.+||+.||.+||+ +.++++|+
T Consensus 188 -------------~~~~~~l~~~l~~~p~~R~~---~~~l~~~~ 215 (215)
T cd00180 188 -------------PELKDLIRKMLQKDPEKRPS---AKEILEHL 215 (215)
T ss_pred -------------HHHHHHHHHHhhCCcccCcC---HHHHhhCC
Confidence 67889999999999999999 77888774
No 399
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=5e-29 Score=254.05 Aligned_cols=214 Identities=46% Similarity=0.766 Sum_probs=184.1
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
|++.+.||.|++|.||++.+..+++.+|+|.+...... .....+.+|+..+..++|+|++++++.+......+++|||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 67889999999999999999988999999998765432 2567888999999999999999999999998999999999
Q ss_pred ccCCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCC
Q 001057 840 LNGGDLYSLLRNLGC-LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSA 918 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~-LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a 918 (1170)
+.+++|.+++..... +++..+..++.+++.+|.|||+++++|+||+|.||+++.++.++|+|||++......
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~------- 151 (225)
T smart00221 79 CEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD------- 151 (225)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc-------
Confidence 999999999988766 899999999999999999999999999999999999999999999999998753100
Q ss_pred CCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHH-hcCCCCcchhhhHHHHHHHHHHhCCCCCCC--CCHHH
Q 001057 919 PSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEIL-LGMGHGATADWWSVGIILFELLIGIPPFNA--KTPQQ 995 (1170)
Q Consensus 919 ~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL-~g~~ys~ksDIWSLGVILYELLTG~pPF~g--~~~~e 995 (1170)
.........++..|++||.+ ....++.++|+|+||+++|+|++|+.||.+ .+...
T Consensus 152 ----------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~ 209 (225)
T smart00221 152 ----------------------LAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSL 209 (225)
T ss_pred ----------------------ccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHH
Confidence 00012345678899999999 666778899999999999999999999987 44457
Q ss_pred HHHHHhccC
Q 001057 996 IFDNIMNRD 1004 (1170)
Q Consensus 996 i~qkIl~~~ 1004 (1170)
+.+.|..+.
T Consensus 210 ~~~~~~~~~ 218 (225)
T smart00221 210 LSDVWSFGV 218 (225)
T ss_pred HHHHHhcCC
Confidence 777777665
No 400
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=6e-30 Score=288.78 Aligned_cols=286 Identities=24% Similarity=0.410 Sum_probs=208.5
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecC---CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeeccc
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRA---TGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRE 831 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~---TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~ 831 (1170)
..+.|.++.+||.|+|++||++.+.. ..++||+|.+.... ....+.+|+++|..+. +.||+++.+++...+
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 34679999999999999999999877 78999999876543 3356889999999886 899999999999999
Q ss_pred ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-CCcEEEEecCCcccccc
Q 001057 832 NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~~~~ 910 (1170)
++++||||++..+..++... ++-..++.|++.++.||.++|.+|||||||||.|+|.+. .+.-.|+|||||.....
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred eeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 99999999998888888775 668889999999999999999999999999999999985 46789999999973111
Q ss_pred ccCCCCC-C----CCCC-CCCccccccccC---CCCC-----cccccccccccCCCCCCchHHHhcCC-CCcchhhhHHH
Q 001057 911 HSTDDLS-A----PSLG-SGGFLVNDELKD---QPPL-----TREQRQKHSVAGTPDYLAPEILLGMG-HGATADWWSVG 975 (1170)
Q Consensus 911 ~~~~d~~-a----~sl~-s~~~l~~~~l~~---~~~l-----t~~~~~~~s~vGTp~YmAPEVL~g~~-ys~ksDIWSLG 975 (1170)
....... . .... .+..+....... ...+ ...........||++|+|||++...+ .+.++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 0000000 0 0000 111111111111 0000 11223345678999999999998754 67899999999
Q ss_pred HHHHHHHhCCCCCCCCC-HHHHHHHHh--------------ccC------CC----------CCCC--------------
Q 001057 976 IILFELLIGIPPFNAKT-PQQIFDNIM--------------NRD------IP----------WPNI-------------- 1010 (1170)
Q Consensus 976 VILYELLTG~pPF~g~~-~~ei~qkIl--------------~~~------l~----------fP~i-------------- 1010 (1170)
||+.-++++..||.... ....+..|. .+. -. |-.+
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 99999999999985422 111111110 011 00 0000
Q ss_pred ----CccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 1011 ----PEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 1011 ----p~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
....+..+.||+.+||..||.+|++ |++.|+||||...+
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~np~kRit---AEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELNPQKRIT---AEDALKHPFFDEAD 388 (418)
T ss_pred eccccccccHHHHHHHHHHccCChhhccc---HHHHhcCcCCcchh
Confidence 1234568999999999999999999 88889999998653
No 401
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.7e-28 Score=292.71 Aligned_cols=254 Identities=28% Similarity=0.446 Sum_probs=208.6
Q ss_pred CCeEEEEEeccCCCeEEEEeeecC-------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeec
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRA-------TGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTC 829 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~-------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd 829 (1170)
++..+.+.||.|.||.|++|.-.. ....||+|.++.... ..+.+.+..|+++|..+- ||||+.+.+++..
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~--~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS--SSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC--cHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 344666699999999999997431 145799999876542 367788999999999885 9999999999999
Q ss_pred ccceEEEEeeccCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNLG----------------CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ 893 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~~----------------~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~ 893 (1170)
...+++|+||+..|+|..+++..+ .++......++.||+.|++||++..+|||||-..|||+..
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~ 453 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITK 453 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecC
Confidence 999999999999999999998765 3888889999999999999999999999999999999999
Q ss_pred CCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCC--CCCCchHHHhcCCCCcchhh
Q 001057 894 DGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGT--PDYLAPEILLGMGHGATADW 971 (1170)
Q Consensus 894 dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGT--p~YmAPEVL~g~~ys~ksDI 971 (1170)
+..+||+|||+|+...... ........|| ..|||||.+....|+.++||
T Consensus 454 ~~~~kIaDFGlar~~~~~~-----------------------------~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDV 504 (609)
T KOG0200|consen 454 NKVIKIADFGLARDHYNKD-----------------------------YYRTKSSAGTLPVKWMAPESLFDRVFTSKSDV 504 (609)
T ss_pred CCEEEEccccceeccCCCC-----------------------------ceEecCCCCccceeecCHHHhccCcccccchh
Confidence 9999999999998421000 0000111222 24999999999999999999
Q ss_pred hHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHc
Q 001057 972 WSVGIILFELLI-GIPPFNAKT-PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQ 1044 (1170)
Q Consensus 972 WSLGVILYELLT-G~pPF~g~~-~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILq 1044 (1170)
||+|++||||++ |..||.+.. ..++++.+..+... ..|..++.++.++++.|++.+|.+||+..+..+.+.
T Consensus 505 WSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~--~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 505 WSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRM--EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred hHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 999999999998 999999866 67777777776643 335788999999999999999999999766655443
No 402
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=5.9e-29 Score=260.58 Aligned_cols=218 Identities=30% Similarity=0.522 Sum_probs=179.1
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~ 832 (1170)
.+..++...+..||+|+||.|-+.++..+|...|+|.+...- ..+...+.++|+++..+. .+|++|++|+.+.....
T Consensus 42 eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 42 EVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred ccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 344456677888999999999999999999999999987543 344556778888887654 69999999999999999
Q ss_pred eEEEEeeccCCChHHHH----HhcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 833 LYLVMEYLNGGDLYSLL----RNLGCLDEDMARVYIAELVLALEYLHSL-NVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlL----k~~~~LSEe~ar~IaaQIL~ALeYLHs~-GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
++|.||.| ..+|..+- ...+.++|..+-.++-.++.||.|||++ .+||||+||+||||+.+|+||+||||.+-.
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 99999999 44776554 4557899999999999999999999975 899999999999999999999999999865
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc----CCCCcchhhhHHHHHHHHHHh
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG----MGHGATADWWSVGIILFELLI 983 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g----~~ys~ksDIWSLGVILYELLT 983 (1170)
.. +.-......|...|||||.+.. .+|+-++||||||++++||++
T Consensus 199 L~-------------------------------dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 199 LV-------------------------------DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred eh-------------------------------hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 31 0001112468889999999863 479999999999999999999
Q ss_pred CCCCCCC-CCHHHHHHHHhccCC
Q 001057 984 GIPPFNA-KTPQQIFDNIMNRDI 1005 (1170)
Q Consensus 984 G~pPF~g-~~~~ei~qkIl~~~l 1005 (1170)
++.||.. .++.+++.+++....
T Consensus 248 lr~PY~~w~tpF~qLkqvVeep~ 270 (282)
T KOG0984|consen 248 LRFPYESWGTPFQQLKQVVEEPS 270 (282)
T ss_pred ccccccccCCHHHHHHHHhcCCC
Confidence 9999975 467778888876544
No 403
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5e-28 Score=274.30 Aligned_cols=249 Identities=26% Similarity=0.390 Sum_probs=188.9
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHH--hcCCCcEEEEEeeeec
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILI--SVRNPFVVRFFYSFTC 829 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILs--kL~HPNIVrL~~~Fqd 829 (1170)
.......+..+++.||+|-||.||.|+++ |+.||||++... ......+|.+|.+ .|+|+||+.++++-..
T Consensus 205 VQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~ 276 (513)
T KOG2052|consen 205 VQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNK 276 (513)
T ss_pred hHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhcccc
Confidence 33455678899999999999999999876 889999998753 2356678888875 4799999999876543
Q ss_pred c----cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCCCCcEEeCCCCcE
Q 001057 830 R----ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSL--------NVIHRDLKPDNLLIGQDGHI 897 (1170)
Q Consensus 830 ~----~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~--------GIIHRDIKPENILLd~dG~V 897 (1170)
+ .+++||.+|.+.|+|+++|.+ ..++.+.+..++..++.||.+||.. .|.|||||..|||+..+|..
T Consensus 277 ~~gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 277 DNGSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred CCCceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 3 369999999999999999998 5789999999999999999999943 49999999999999999999
Q ss_pred EEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC------CCcchhh
Q 001057 898 KLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG------HGATADW 971 (1170)
Q Consensus 898 KLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~------ys~ksDI 971 (1170)
.|+|+|||..... .++ .-.-..+..+||..|||||+|...- .-..+||
T Consensus 356 ~IADLGLAv~h~~-~t~-------------------------~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADI 409 (513)
T KOG2052|consen 356 CIADLGLAVRHDS-DTD-------------------------TIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADI 409 (513)
T ss_pred EEeeceeeEEecc-cCC-------------------------cccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHH
Confidence 9999999975210 000 0112345679999999999997531 1235899
Q ss_pred hHHHHHHHHHHhC----------CCCCCCC-----CHHHHHHHHhccCCCCCCCCccC--C---HHHHHHHHHhccCCCC
Q 001057 972 WSVGIILFELLIG----------IPPFNAK-----TPQQIFDNIMNRDIPWPNIPEEM--S---VEACDLIDKLLTENPV 1031 (1170)
Q Consensus 972 WSLGVILYELLTG----------~pPF~g~-----~~~ei~qkIl~~~l~fP~ip~~l--S---~eakDLIkkLLq~DPs 1031 (1170)
||||.+|||++.. ++||++. +.+++.+-+...++ -|.+|... . ..+..|++.|+..||.
T Consensus 410 YafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~-RP~ipnrW~s~~~l~~m~klMkeCW~~Np~ 488 (513)
T KOG2052|consen 410 YAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL-RPNIPNRWKSDPALRVMAKLMKECWYANPA 488 (513)
T ss_pred HHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeeccc-CCCCCcccccCHHHHHHHHHHHHhhcCCch
Confidence 9999999999862 6788753 23444333332332 23333322 2 2345788999999999
Q ss_pred CCCCh
Q 001057 1032 QRLGA 1036 (1170)
Q Consensus 1032 kRpSa 1036 (1170)
-|+++
T Consensus 489 aRltA 493 (513)
T KOG2052|consen 489 ARLTA 493 (513)
T ss_pred hhhHH
Confidence 99993
No 404
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=4.6e-28 Score=276.11 Aligned_cols=248 Identities=25% Similarity=0.410 Sum_probs=191.2
Q ss_pred CCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHh--cCCCcEEEEEeeeeccc--
Q 001057 756 SIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILIS--VRNPFVVRFFYSFTCRE-- 831 (1170)
Q Consensus 756 ~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILsk--L~HPNIVrL~~~Fqd~~-- 831 (1170)
.....+++.+||+|.||.||+|+. +++.||||++.. ...+.+.+|.+|... +.|+||++++++-....
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~ 279 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD 279 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhc--cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence 355677888999999999999975 479999999864 455788899998764 57999999997655444
Q ss_pred --ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------CeeeccCCCCcEEeCCCCcEEEE
Q 001057 832 --NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSL---------NVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 832 --~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~---------GIIHRDIKPENILLd~dG~VKLs 900 (1170)
.+.||++|.+.|+|.++|+.+ .+++.....++..|+.||+|||+- .|+|||||..||||..|+...|+
T Consensus 280 ~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 280 RMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred ccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 789999999999999999974 689999999999999999999953 59999999999999999999999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-CC-----cchhhhHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-HG-----ATADWWSV 974 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-ys-----~ksDIWSL 974 (1170)
|||||..+. + ..........+||..|||||+|.+.- .. ...||||+
T Consensus 359 DFGLAl~~~---------p-------------------~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYam 410 (534)
T KOG3653|consen 359 DFGLALRLE---------P-------------------GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAM 410 (534)
T ss_pred ccceeEEec---------C-------------------CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHH
Confidence 999998642 0 01112233478999999999998742 22 34799999
Q ss_pred HHHHHHHHhCCCC------------CC-----CCCHHHHHHHHhccCCCCCCCCc-----cCCHHHHHHHHHhccCCCCC
Q 001057 975 GIILFELLIGIPP------------FN-----AKTPQQIFDNIMNRDIPWPNIPE-----EMSVEACDLIDKLLTENPVQ 1032 (1170)
Q Consensus 975 GVILYELLTG~pP------------F~-----g~~~~ei~qkIl~~~l~fP~ip~-----~lS~eakDLIkkLLq~DPsk 1032 (1170)
|.+||||++...- |. ..+.+++...++..+ .-|.++. .--..+++.|..|+..||+.
T Consensus 411 gLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK-~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeA 489 (534)
T KOG3653|consen 411 GLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKK-QRPKIPDAWRKHAGMAVLCETIEECWDHDAEA 489 (534)
T ss_pred HHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhc-cCCCChhhhhcCccHHHHHHHHHHHcCCchhh
Confidence 9999999986433 32 122344444444332 2222222 22456889999999999999
Q ss_pred CCChhhHHH
Q 001057 1033 RLGATGARE 1041 (1170)
Q Consensus 1033 RpSa~~AeE 1041 (1170)
|+|+.-|.|
T Consensus 490 RLTA~Cv~e 498 (534)
T KOG3653|consen 490 RLTAGCVEE 498 (534)
T ss_pred hhhhHHHHH
Confidence 999665544
No 405
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.95 E-value=2.7e-26 Score=235.27 Aligned_cols=259 Identities=40% Similarity=0.697 Sum_probs=208.0
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC-cEEEEEeeeecccceEEEEe
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNP-FVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HP-NIVrL~~~Fqd~~~LyLVME 838 (1170)
|.+...||.|+||.||++.+. ..+|+|.+.............+.+|..++..+.|+ +|+++++.+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 889999999999999999987 78999999876554444678899999999999988 79999999987777899999
Q ss_pred eccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-cEEEEecCCccccccccCC
Q 001057 839 YLNGGDLYSLLRNLG---CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-HIKLTDFGLSKVGLIHSTD 914 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~---~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-~VKLsDFGLAk~~~~~~~~ 914 (1170)
|+.+++|..++.... .++...+..++.|++.++.|+|+.|++||||||+|||++..+ .++++|||+++.......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~- 157 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS- 157 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc-
Confidence 999999998877664 799999999999999999999999999999999999999988 799999999874210000
Q ss_pred CCCCCCCCCCCccccccccCCCCCcccc-cccccccCCCCCCchHHHhc---CCCCcchhhhHHHHHHHHHHhCCCCCCC
Q 001057 915 DLSAPSLGSGGFLVNDELKDQPPLTREQ-RQKHSVAGTPDYLAPEILLG---MGHGATADWWSVGIILFELLIGIPPFNA 990 (1170)
Q Consensus 915 d~~a~sl~s~~~l~~~~l~~~~~lt~~~-~~~~s~vGTp~YmAPEVL~g---~~ys~ksDIWSLGVILYELLTG~pPF~g 990 (1170)
.... ......+||..|+|||++.+ ..+....|+||+|++++++++|..||..
T Consensus 158 ------------------------~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~ 213 (384)
T COG0515 158 ------------------------TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEG 213 (384)
T ss_pred ------------------------cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 0000 13456789999999999988 5788999999999999999999999887
Q ss_pred CCH----HHHHHHHhccCCC-CC-CCCccC----CHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 991 KTP----QQIFDNIMNRDIP-WP-NIPEEM----SVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 991 ~~~----~ei~qkIl~~~l~-fP-~ip~~l----S~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
... ......+.....+ .. ...... ...+.+++.+++..+|..|.+ ..+...++|..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~---~~~~~~~~~~~ 279 (384)
T COG0515 214 EKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS---SSSDLSHDLLA 279 (384)
T ss_pred CCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCC---HHHHhhchHhh
Confidence 763 4555555544433 11 111111 257899999999999999998 44445554443
No 406
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=5.9e-28 Score=286.36 Aligned_cols=246 Identities=22% Similarity=0.325 Sum_probs=206.5
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCC----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGD----LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe----~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~Ly 834 (1170)
..+..++||.|+||+||+|.+.-.|+ +||||++.... .......++.|+-+|.+++|||+++|++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t--~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFT--SPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccC--CchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 35567789999999999998865554 78999887654 3445678999999999999999999999988766 88
Q ss_pred EEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccC
Q 001057 835 LVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHST 913 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~ 913 (1170)
||++|+++|+|.++++.+ +.+-......|..||++|+.|||.++++||||-..||||..-.++||+|||+|+......
T Consensus 774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~- 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE- 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc-
Confidence 999999999999999875 568889999999999999999999999999999999999999999999999999642110
Q ss_pred CCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh-CCCCCCCCC
Q 001057 914 DDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI-GIPPFNAKT 992 (1170)
Q Consensus 914 ~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT-G~pPF~g~~ 992 (1170)
.+. ......--+-|||-|.+....|+.++||||+||++||++| |..||.+..
T Consensus 853 ~ey---------------------------~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 853 KEY---------------------------SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred ccc---------------------------cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 000 0001112356899999999999999999999999999997 999999999
Q ss_pred HHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChh
Q 001057 993 PQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGAT 1037 (1170)
Q Consensus 993 ~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~ 1037 (1170)
..++-+.+..+.. + ..|..++.++.-++.+||-.|+..||++.
T Consensus 906 ~~eI~dlle~geR-L-sqPpiCtiDVy~~mvkCwmid~~~rp~fk 948 (1177)
T KOG1025|consen 906 AEEIPDLLEKGER-L-SQPPICTIDVYMVMVKCWMIDADSRPTFK 948 (1177)
T ss_pred HHHhhHHHhcccc-C-CCCCCccHHHHHHHHHHhccCcccCccHH
Confidence 9999888776654 2 23567999999999999999999999943
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=2.6e-28 Score=302.20 Aligned_cols=229 Identities=15% Similarity=0.167 Sum_probs=155.9
Q ss_pred cCC-CcEEEEEeee-------ecccceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 001057 815 VRN-PFVVRFFYSF-------TCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLK 885 (1170)
Q Consensus 815 L~H-PNIVrL~~~F-------qd~~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIK 885 (1170)
++| +||++++++| .....++++|||+ +++|+++|... ..+++.+++.|+.||+.||.|||++||||||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 344 5777777777 2334688889988 67999999753 469999999999999999999999999999999
Q ss_pred CCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCcc---ccccccCC--CCCcccccccccccCCCCCCchHHH
Q 001057 886 PDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFL---VNDELKDQ--PPLTREQRQKHSVAGTPDYLAPEIL 960 (1170)
Q Consensus 886 PENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l---~~~~l~~~--~~lt~~~~~~~s~vGTp~YmAPEVL 960 (1170)
|+||||+..|.+|++|||++...............++..... ........ .............+||++|||||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 999999988888888888876421110000000001000000 00000000 0000000112235799999999999
Q ss_pred hcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHH
Q 001057 961 LGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAR 1040 (1170)
Q Consensus 961 ~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~Ae 1040 (1170)
.+..|+.++|||||||+||||++|.+||.... ..+..+..... |.......+.+.+++.+||++||.+||+ +.
T Consensus 188 ~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~~~P~~Rps---~~ 260 (793)
T PLN00181 188 NGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQILLNWPKEASFCLWLLHPEPSCRPS---MS 260 (793)
T ss_pred ccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--ChhhhhcCHHHHHHHHHhCCCChhhCcC---hH
Confidence 99999999999999999999999999986432 12222222111 1111123456779999999999999999 88
Q ss_pred HHHcCCCCCCC
Q 001057 1041 EVKQHPFFKNI 1051 (1170)
Q Consensus 1041 EILqHPfF~~i 1051 (1170)
++++||||...
T Consensus 261 eil~h~~~~~~ 271 (793)
T PLN00181 261 ELLQSEFINEP 271 (793)
T ss_pred HHhhchhhhhh
Confidence 99999999763
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-27 Score=257.32 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=196.0
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEe-eeecccceE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFY-SFTCRENLY 834 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~-~Fqd~~~Ly 834 (1170)
.+.|.+.+.||.|-||.+.+|+++.++..+++|.+.+.. .....|.+|..---.|. |.||+.-|+ +|+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 357999999999999999999999999999999988764 34456777776544454 889998774 688888999
Q ss_pred EEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeC--CCCcEEEEecCCcccccccc
Q 001057 835 LVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIG--QDGHIKLTDFGLSKVGLIHS 912 (1170)
Q Consensus 835 LVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd--~dG~VKLsDFGLAk~~~~~~ 912 (1170)
++|||++-|+|..-+... .+-|.-.+.+++|++.||.|||++++||||||.+||||- +...|||||||+.+...
T Consensus 99 F~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g--- 174 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG--- 174 (378)
T ss_pred EeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccC---
Confidence 999999999999988764 488899999999999999999999999999999999984 23489999999986421
Q ss_pred CCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-----CCcchhhhHHHHHHHHHHhCCCC
Q 001057 913 TDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-----HGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 913 ~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-----ys~ksDIWSLGVILYELLTG~pP 987 (1170)
. ...-.--+..|.+||+..... ..+..|+|.||+|+|.+|+|++|
T Consensus 175 -------------~-----------------tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~P 224 (378)
T KOG1345|consen 175 -------------T-----------------TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFP 224 (378)
T ss_pred -------------c-----------------eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCc
Confidence 0 001112355799999886432 46788999999999999999999
Q ss_pred CCCCCH-----HHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 988 FNAKTP-----QQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 988 F~g~~~-----~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
|..... -+..+.........|.....+++.+..+.++-|..+|+.|-..-+++.....-|.
T Consensus 225 WQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 225 WQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred chhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 974321 1222222233344555556789999999999999999999443335555555443
No 409
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=4.9e-26 Score=228.49 Aligned_cols=161 Identities=25% Similarity=0.285 Sum_probs=129.5
Q ss_pred CChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCC
Q 001057 843 GDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSL 921 (1170)
Q Consensus 843 GSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl 921 (1170)
|+|.+++... ..+++..++.++.||+.||.|||+++ ||+|||++.++.+|+ ||+++...
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~------------ 60 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKT------------ 60 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeec------------
Confidence 6899999874 46999999999999999999999999 999999999999999 99987521
Q ss_pred CCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCH-HHHHHHH
Q 001057 922 GSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTP-QQIFDNI 1000 (1170)
Q Consensus 922 ~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~-~ei~qkI 1000 (1170)
. ....||+.|||||++.+..|+.++|||||||++|||++|.+||..... ...+..+
T Consensus 61 ------------------~-----~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~ 117 (176)
T smart00750 61 ------------------P-----EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEIL 117 (176)
T ss_pred ------------------c-----ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHH
Confidence 0 012589999999999999999999999999999999999999976543 2333343
Q ss_pred hccCCCC-C---CCCccCCH--HHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 1001 MNRDIPW-P---NIPEEMSV--EACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 1001 l~~~l~f-P---~ip~~lS~--eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
....... + ..+..++. ++++||.+||..||.+||+ +.+++.|+|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~---~~~ll~~~~~~ 169 (176)
T smart00750 118 LNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREA---ANHYLAHCRAL 169 (176)
T ss_pred HHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccC---HHHHHHHHHHH
Confidence 3322211 0 01123344 6999999999999999999 88999999874
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=4.2e-26 Score=275.06 Aligned_cols=262 Identities=25% Similarity=0.394 Sum_probs=204.0
Q ss_pred EEEEEeccCCCeEEEEeeecCCCCEEEEEEeec---cccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 761 EIIKPISQGAFGRVFLARKRATGDLFAIKVLKK---ADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 761 evlk~LG~GgFGtVyLArdk~TGe~VAIKvLkK---s~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
.....+|.|++|.|+.+......+.++.|.+.. ...........+..|.-+-..+.|||++.....+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456789999999999998887777777776542 11112222223666777778899999988777666666655669
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
|||++ ||+.++...+.++...+..++.|++.|++|||+.||.||||||+|+|+..+|.+||+|||.+..+...
T Consensus 401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~------ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP------ 473 (601)
T ss_pred hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC------
Confidence 99999 99999999888999999999999999999999999999999999999999999999999998753211
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcc-hhhhHHHHHHHHHHhCCCCCCCCCHHHH
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGAT-ADWWSVGIILFELLIGIPPFNAKTPQQI 996 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~k-sDIWSLGVILYELLTG~pPF~g~~~~ei 996 (1170)
...........+|+..|+|||++.+..|.+. +||||.|++++.|++|+.||.-....+.
T Consensus 474 --------------------~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~ 533 (601)
T KOG0590|consen 474 --------------------WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDN 533 (601)
T ss_pred --------------------cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccccc
Confidence 1111234567899999999999999988764 7999999999999999999975433221
Q ss_pred --HHHHhccCCCC----CCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCC
Q 001057 997 --FDNIMNRDIPW----PNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNIN 1052 (1170)
Q Consensus 997 --~qkIl~~~l~f----P~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~id 1052 (1170)
++......... -.+-..++.+.+.+|.+||+.||.+|.+ +++|++.+||+.++
T Consensus 534 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~t---i~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 534 SFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRIT---IEQILNDEWIRSIE 592 (601)
T ss_pred chhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheec---HHHHhhChHhhhcc
Confidence 11111111110 0122467889999999999999999999 88999999999875
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.91 E-value=3.7e-23 Score=231.18 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=193.8
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCC-CEEEEEEeeccccccHHHHHHHHHHHHHHHhcC----CCcEEEEEeee-ecccc
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATG-DLFAIKVLKKADMIRKNAVESILAERNILISVR----NPFVVRFFYSF-TCREN 832 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TG-e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~----HPNIVrL~~~F-qd~~~ 832 (1170)
+|.+.++||.|+||.||+|.+..++ ..+|+|+......... ..+..|..++..+. .+++..+++.+ .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999988774 6899998765432111 15667888888876 26899999988 47778
Q ss_pred eEEEEeeccCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC-----CcEEEEecCCc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD-----GHIKLTDFGLS 905 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d-----G~VKLsDFGLA 905 (1170)
-||||+.+ |.+|.++.... +.|+...+..++.|++.+|++||+.|+|||||||+|+++... -.+.|.|||+|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 89999988 88999988654 579999999999999999999999999999999999999865 36999999999
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCC
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGI 985 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~ 985 (1170)
+........ +.. ..........+.||..|+++.+..+...+...|+||++.++.+|+.|.
T Consensus 175 r~~~~~~~~---------~~~-----------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 175 RRFKYVGDS---------GGN-----------LRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred ccccccCCC---------Ccc-----------cccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 832100000 000 001111124566999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHH---hccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 986 PPFNAKTPQQIFDNI---MNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 986 pPF~g~~~~ei~qkI---l~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
.||.+.........+ ........ .....+.++..+...+-..+...+|.......+
T Consensus 235 LPW~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 235 LPWEALEMTDLKSKFEKDPRKLLTDR-FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred CCCccccccchHHHHHHHhhhhcccc-ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 999765532222222 21111110 223456777777777777888888885444444
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.91 E-value=5.4e-24 Score=243.43 Aligned_cols=178 Identities=21% Similarity=0.173 Sum_probs=134.2
Q ss_pred CCCCCCCCeEEEEEeccCCCeEEEEeeecC-CCCEEEEEEeecccc--ccHHHHHHHHHHHHHHHhcCCCcEEE-EEeee
Q 001057 752 KDRTSIEDFEIIKPISQGAFGRVFLARKRA-TGDLFAIKVLKKADM--IRKNAVESILAERNILISVRNPFVVR-FFYSF 827 (1170)
Q Consensus 752 ~~~i~iedYevlk~LG~GgFGtVyLArdk~-TGe~VAIKvLkKs~i--~~~~~ve~~l~EieILskL~HPNIVr-L~~~F 827 (1170)
......++|++.+.||+|+||+||+|+++. +++.||||++..... ........+.+|+.+|..++|+||+. +++.
T Consensus 12 ~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~- 90 (365)
T PRK09188 12 QIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT- 90 (365)
T ss_pred ccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-
Confidence 445667889999999999999999999876 788889998653211 12334567899999999999999985 5432
Q ss_pred ecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC-CCCcEEeCCCCcEEEEecCCcc
Q 001057 828 TCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDL-KPDNLLIGQDGHIKLTDFGLSK 906 (1170)
Q Consensus 828 qd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDI-KPENILLd~dG~VKLsDFGLAk 906 (1170)
...||||||++|++|.. +.. .. ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+
T Consensus 91 ---~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred ---CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 45799999999999973 211 11 1457889999999999999999999 9999999999999999999998
Q ss_pred ccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhc
Q 001057 907 VGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLG 962 (1170)
Q Consensus 907 ~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g 962 (1170)
...... . ...+.. .....+.+|++.|+|||.+..
T Consensus 161 ~~~~~~-----------~----------~~~~~~-~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRG-----------A----------LYRIAA-YEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCc-----------c----------hhhhhh-hhhhhhhhccCccCCcccCCh
Confidence 642100 0 000000 011136778999999999864
No 413
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.90 E-value=3.9e-23 Score=231.43 Aligned_cols=257 Identities=20% Similarity=0.258 Sum_probs=204.8
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCC-----EEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGD-----LFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC 829 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe-----~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd 829 (1170)
+...+++....+-+|.||.||.|.++.... .|-+|.++.. ...-++..++.|.-+|..+.|||+..+.++...
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie 358 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE 358 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee
Confidence 445678888899999999999997764332 3445554432 244567788999999999999999999887655
Q ss_pred -ccceEEEEeeccCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEE
Q 001057 830 -RENLYLVMEYLNGGDLYSLLRNL--------GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 830 -~~~LyLVMEY~~GGSL~dlLk~~--------~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLs 900 (1170)
....+.++.++.-|+|..+|... +.++..+...++.|+..|++|||++||||.||-..|.+|++.-+|||+
T Consensus 359 ~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt 438 (563)
T KOG1024|consen 359 DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT 438 (563)
T ss_pred ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEec
Confidence 45678889999999999999722 246677778888999999999999999999999999999999999999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 980 (1170)
|=.+++..- .. .-++++ . .-.-...||+||.+.+..|+.++|+|||||+|||
T Consensus 439 DsaLSRDLF-P~----DYhcLG-----------------D------nEnRPvkWMslEal~n~~yssasDvWsfGVllWE 490 (563)
T KOG1024|consen 439 DSALSRDLF-PG----DYHCLG-----------------D------NENRPVKWMSLEALQNSHYSSASDVWSFGVLLWE 490 (563)
T ss_pred cchhccccC-cc----cccccC-----------------C------CCCCcccccCHHHHhhhhhcchhhhHHHHHHHHH
Confidence 999987431 00 000110 0 0011346999999999999999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH
Q 001057 981 LLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK 1043 (1170)
Q Consensus 981 LLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL 1043 (1170)
|+| |+.||...++.++...++.+..- .-|.++++++..++.-|+..+|++||+..+....|
T Consensus 491 Lmtlg~~PyaeIDPfEm~~ylkdGyRl--aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 491 LMTLGKLPYAEIDPFEMEHYLKDGYRL--AQPFNCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred HHhcCCCCccccCHHHHHHHHhcccee--cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 997 99999999999999988876532 22478999999999999999999999966665544
No 414
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.2e-22 Score=224.49 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=196.7
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccce
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~L 833 (1170)
+.--.|++.++||.|+||+.++|.+..++++||||.-... ...-++..|....+.|. .++|...|++.++.-+-
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~N 99 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYN 99 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchh
Confidence 3445799999999999999999999999999999975432 23345667877777775 69999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC-----cEEEEecCCccc
Q 001057 834 YLVMEYLNGGDLYSLLRNLG-CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG-----HIKLTDFGLSKV 907 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~-~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG-----~VKLsDFGLAk~ 907 (1170)
.||||++ |.+|.+++.-++ .|+...+..++.|++.-++|+|++++|+|||||+|+||...+ .|.|+|||+|+.
T Consensus 100 iLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 100 ILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred hhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 9999999 889999988765 599999999999999999999999999999999999997544 589999999996
Q ss_pred cccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCC
Q 001057 908 GLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPP 987 (1170)
Q Consensus 908 ~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pP 987 (1170)
..- ...+...+ -+...+..||..||+-...+|...+...|+=|||-++++.|-|..|
T Consensus 179 YrD-------------------p~TkqHIP----YrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLP 235 (449)
T KOG1165|consen 179 YRD-------------------PKTKQHIP----YREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 235 (449)
T ss_pred hcC-------------------ccccccCc----cccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCc
Confidence 421 11111111 2234577899999999999999999999999999999999999999
Q ss_pred CCCC---CHHHHHHHHhccCCCCC--CCCccCCHHHHHHHHHhccCCCCCCCC
Q 001057 988 FNAK---TPQQIFDNIMNRDIPWP--NIPEEMSVEACDLIDKLLTENPVQRLG 1035 (1170)
Q Consensus 988 F~g~---~~~ei~qkIl~~~l~fP--~ip~~lS~eakDLIkkLLq~DPskRpS 1035 (1170)
|.|. +..+-|++|-..+..-| .+-.+++.++..-+.-.-..+-.+-|.
T Consensus 236 WQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PD 288 (449)
T KOG1165|consen 236 WQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPD 288 (449)
T ss_pred cccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCC
Confidence 9874 55677788865543322 112345555555554444444444444
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-22 Score=216.80 Aligned_cols=277 Identities=22% Similarity=0.319 Sum_probs=213.6
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CcEEEEEeeeecccc
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN-PFVVRFFYSFTCREN 832 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H-PNIVrL~~~Fqd~~~ 832 (1170)
-+....|+++++||.|+||.+|+|....+|+.||||+-.+.. .-.++..|..+...|++ ..|..+..++.+..+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 355678999999999999999999999999999999865432 11356778888888875 788888888999999
Q ss_pred eEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC---CcEEEEecCCcccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD---GHIKLTDFGLSKVG 908 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d---G~VKLsDFGLAk~~ 908 (1170)
-.|||+++ |.+|.+++.-. ..|+...+..++-|++.-|+|+|.+++|||||||+|+|+.-+ ..+.|+|||||+..
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 99999999 88999988644 469999999999999999999999999999999999999754 46899999999964
Q ss_pred ccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 909 LIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 909 ~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
. ...... . ..-+......||..|.+-....+...+...|+=|+|.+|..+.-|..||
T Consensus 165 ~-d~~t~~--------------------H--Ipyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPW 221 (341)
T KOG1163|consen 165 R-DIRTRQ--------------------H--IPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPW 221 (341)
T ss_pred c-cccccc--------------------c--CccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcc
Confidence 2 000000 0 1122334678999999999988888899999999999999999999999
Q ss_pred CCCCH---HHHHHHHhccCCCCC--CCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHH-------cCCCCCCCChhhh
Q 001057 989 NAKTP---QQIFDNIMNRDIPWP--NIPEEMSVEACDLIDKLLTENPVQRLGATGAREVK-------QHPFFKNINWDTL 1056 (1170)
Q Consensus 989 ~g~~~---~ei~qkIl~~~l~fP--~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEIL-------qHPfF~~idwe~L 1056 (1170)
.+... .+-+++|...+...| .+-..+|.++.-.|.-|-..--.+-|...-..++. +|.+=--.||..+
T Consensus 222 Qglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~l 301 (341)
T KOG1163|consen 222 QGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTML 301 (341)
T ss_pred cccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHH
Confidence 98653 455677776665443 12357788888888888777666666633333333 2333223578887
Q ss_pred hhc
Q 001057 1057 ARQ 1059 (1170)
Q Consensus 1057 ~~~ 1059 (1170)
..+
T Consensus 302 kqk 304 (341)
T KOG1163|consen 302 KQK 304 (341)
T ss_pred HHH
Confidence 754
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.86 E-value=8.6e-22 Score=205.98 Aligned_cols=141 Identities=23% Similarity=0.194 Sum_probs=110.8
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHH-----------------------HHHHHHHHHHHHHhcCCCc
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKN-----------------------AVESILAERNILISVRNPF 819 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~-----------------------~ve~~l~EieILskL~HPN 819 (1170)
...||+|+||.||+|.+. +|+.||||+++........ .......|+.+|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 457999999999999987 8999999999764321111 0123345999999998776
Q ss_pred EEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCeeeccCCCCcEEeCCCCcEE
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYL-HSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYL-Hs~GIIHRDIKPENILLd~dG~VK 898 (1170)
+...+.. ... ..+|||||++|++|...+...+.++...+..++.|++.+|.|| |+.||+||||||+|||++ ++.++
T Consensus 81 v~~p~~~-~~~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~ 157 (190)
T cd05147 81 IPCPEPI-LLK-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY 157 (190)
T ss_pred CCCCcEE-Eec-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence 6332221 112 2389999999888776654456799999999999999999999 799999999999999998 58899
Q ss_pred EEecCCccc
Q 001057 899 LTDFGLSKV 907 (1170)
Q Consensus 899 LsDFGLAk~ 907 (1170)
|+|||+|..
T Consensus 158 LiDFG~a~~ 166 (190)
T cd05147 158 IIDVSQSVE 166 (190)
T ss_pred EEEcccccc
Confidence 999999974
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.85 E-value=7.7e-21 Score=197.41 Aligned_cols=141 Identities=22% Similarity=0.152 Sum_probs=112.0
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeecccccc-----------------------HHHHHHHHHHHHHHHhcCCCc
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIR-----------------------KNAVESILAERNILISVRNPF 819 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~-----------------------~~~ve~~l~EieILskL~HPN 819 (1170)
...||+|+||+||+|++. +|+.||||++....... .........|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999987 89999999988652110 001233467899999999998
Q ss_pred EEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcEE
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~VK 898 (1170)
|.....+... ..||||||++|+++.........++...+..++.|++.+|.+||+ +||+||||||+|||++ ++.++
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~ 157 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPY 157 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEE
Confidence 7443332222 248999999988665443334568888999999999999999999 9999999999999998 89999
Q ss_pred EEecCCccc
Q 001057 899 LTDFGLSKV 907 (1170)
Q Consensus 899 LsDFGLAk~ 907 (1170)
|+|||+|+.
T Consensus 158 liDFG~a~~ 166 (190)
T cd05145 158 IIDVSQAVE 166 (190)
T ss_pred EEEccccee
Confidence 999999985
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=7.4e-21 Score=205.69 Aligned_cols=175 Identities=17% Similarity=0.191 Sum_probs=136.0
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHH------HHHHHHHHHhcCCCcEEEEEeeee
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVES------ILAERNILISVRNPFVVRFFYSFT 828 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~------~l~EieILskL~HPNIVrL~~~Fq 828 (1170)
+..++|++++.||.|+||.||++.. ++..||||++............. +.+|+..+.++.||+|..+..++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 4457899999999999999999755 46689999997654444444444 578999999999999999888766
Q ss_pred cc--------cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEE
Q 001057 829 CR--------ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 829 d~--------~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLs 900 (1170)
+. ...+|||||++|.+|.++.. +++. ...+++.+|..||+.||+||||||+|||++.+| ++|+
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~li 176 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRII 176 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh----ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEE
Confidence 43 35799999999999988632 3332 456999999999999999999999999999999 9999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 980 (1170)
|||..+... . ... -.-+++...|+.++|+||||+++..
T Consensus 177 Dfg~~~~~~------------------------------e--~~a----------~d~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 177 DLSGKRCTA------------------------------Q--RKA----------KDRIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred ECCCccccc------------------------------c--hhh----------HHHHHHHhHhcccccccceeEeehH
Confidence 999876320 0 000 0114455567789999999999875
Q ss_pred HH
Q 001057 981 LL 982 (1170)
Q Consensus 981 LL 982 (1170)
+.
T Consensus 215 ~~ 216 (232)
T PRK10359 215 YK 216 (232)
T ss_pred HH
Confidence 54
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=2e-20 Score=207.90 Aligned_cols=234 Identities=26% Similarity=0.347 Sum_probs=153.1
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-----------CcEE-----E
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN-----------PFVV-----R 822 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H-----------PNIV-----r 822 (1170)
.+.....||.|+++.||.+++..||+.+|+|++...........+.+.+|.-....+.+ ..++ +
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 36677899999999999999999999999999876554444556666666544433222 1222 2
Q ss_pred EE---eeeecc---c-----ceEEEEeeccCCChHHHHHh---cCCC---CHHHHH-HHHHHHHHHHHHHHhCCeeeccC
Q 001057 823 FF---YSFTCR---E-----NLYLVMEYLNGGDLYSLLRN---LGCL---DEDMAR-VYIAELVLALEYLHSLNVIHRDL 884 (1170)
Q Consensus 823 L~---~~Fqd~---~-----~LyLVMEY~~GGSL~dlLk~---~~~L---SEe~ar-~IaaQIL~ALeYLHs~GIIHRDI 884 (1170)
+- .++... . +.+++|+-+ .+||..++.- .... ....++ .+..|++..+++||..||+|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 011111 1 347788877 5688888642 2222 122333 34479999999999999999999
Q ss_pred CCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-
Q 001057 885 KPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM- 963 (1170)
Q Consensus 885 KPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~- 963 (1170)
||+|+|++.+|.++|+||+...... ........+..|.+||+....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g---------------------------------~~~~~~~~~~~~~PPe~~~~~~ 218 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAG---------------------------------TRYRCSEFPVAFTPPELESCAG 218 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETT---------------------------------EEEEGGGS-TTTS-HHHHHHHT
T ss_pred ceeeEEEcCCCCEEEcChHHHeecC---------------------------------ceeeccCCCcccCChhhhhhhc
Confidence 9999999999999999998765311 011112345789999987542
Q ss_pred -------CCCcchhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCC
Q 001057 964 -------GHGATADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQR 1033 (1170)
Q Consensus 964 -------~ys~ksDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskR 1033 (1170)
.++.+.|.|+||+++|.|.||..||.......... ..|..+. +++..+++||..||++||.+|
T Consensus 219 ~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~------~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 219 QFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE------WDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG------GGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc------ccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 46888999999999999999999998665432211 1344565 899999999999999999988
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.3e-19 Score=193.79 Aligned_cols=203 Identities=22% Similarity=0.246 Sum_probs=143.5
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeecccccc-HHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEE
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIR-KNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~-~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
+.+...|++|+||+||++.. .+..++.+.+....... .-+...+.+|+++|.+|. |++|++++++ ...|++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 44677899999999998865 57778877665443211 112235789999999996 4789999875 4469999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC-CCCcEEeCCCCcEEEEecCCccccccccCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDL-KPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDL 916 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDI-KPENILLd~dG~VKLsDFGLAk~~~~~~~~d~ 916 (1170)
||+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||+|....... ..
T Consensus 78 eyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~--~~ 148 (218)
T PRK12274 78 SYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA--RW 148 (218)
T ss_pred eeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc--hH
Confidence 99999998764422 1 1347789999999999999999999 7999999999999999999998421000 00
Q ss_pred CCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcC-CCC-cchhhhHHHHHHHHHHhCCCCCCCCC
Q 001057 917 SAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGM-GHG-ATADWWSVGIILFELLIGIPPFNAKT 992 (1170)
Q Consensus 917 ~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~-~ys-~ksDIWSLGVILYELLTG~pPF~g~~ 992 (1170)
.-.+.... -......-...++.|++|+...-- ..+ ...+|++.|+-+|.|+|+..|+.++.
T Consensus 149 -------~r~L~~rD--------l~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 149 -------MRLLARED--------LRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred -------HHHHHHHH--------HHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 00000000 000011122378999999865432 223 56799999999999999999987654
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=6.8e-20 Score=206.09 Aligned_cols=274 Identities=26% Similarity=0.377 Sum_probs=191.0
Q ss_pred CCCCCCCeEEEEEeccCCCeEEEEeeecCCC-----------------------------------CEEEEEEeeccccc
Q 001057 753 DRTSIEDFEIIKPISQGAFGRVFLARKRATG-----------------------------------DLFAIKVLKKADMI 797 (1170)
Q Consensus 753 ~~i~iedYevlk~LG~GgFGtVyLArdk~TG-----------------------------------e~VAIKvLkKs~i~ 797 (1170)
..+.+++|++...||+|.-..||.|+....| -+.|||.+-.-+..
T Consensus 152 skFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~ 231 (598)
T KOG4158|consen 152 SKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD 231 (598)
T ss_pred cccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC
Confidence 4677899999999999999999998754311 14577766543222
Q ss_pred c--HHHHHHHHHHHH------HH--------Hh--------cCCCcEEEEEeeeecc-----------------------
Q 001057 798 R--KNAVESILAERN------IL--------IS--------VRNPFVVRFFYSFTCR----------------------- 830 (1170)
Q Consensus 798 ~--~~~ve~~l~Eie------IL--------sk--------L~HPNIVrL~~~Fqd~----------------------- 830 (1170)
. ...+..+-+|.- .+ +. -.|||||+++.+|.+.
T Consensus 232 s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g 311 (598)
T KOG4158|consen 232 SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSG 311 (598)
T ss_pred CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccc
Confidence 1 112222222211 11 11 2499999999888653
Q ss_pred ----cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeC--CCC--cEEEEec
Q 001057 831 ----ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIG--QDG--HIKLTDF 902 (1170)
Q Consensus 831 ----~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd--~dG--~VKLsDF 902 (1170)
..+|+||.-.. .+|..++... ..+....+.+++|+++|+.|||++||.|||+|.+||||. +|+ .+.|+||
T Consensus 312 ~g~~~tlylvMkrY~-~tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDF 389 (598)
T KOG4158|consen 312 AGEPKTLYLVMKRYR-QTLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADF 389 (598)
T ss_pred cCCCceEEEehhcch-hhHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccc
Confidence 24799998884 5999999864 456677888999999999999999999999999999984 444 5899999
Q ss_pred CCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC------CCcchhhhHHHH
Q 001057 903 GLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG------HGATADWWSVGI 976 (1170)
Q Consensus 903 GLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~------ys~ksDIWSLGV 976 (1170)
|.|--...+. +..+ +.. -.-..-|...-||||+....+ .-.++|.|+.|.
T Consensus 390 GCcLAd~~hG---lqlp------------------y~S---~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Ga 445 (598)
T KOG4158|consen 390 GCCLADDNHG---LQLP------------------YES---DEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGA 445 (598)
T ss_pred ceeeeccccc---cccc------------------ccc---ccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhh
Confidence 9875321110 0000 000 111234777899999987532 124789999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh
Q 001057 977 ILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW 1053 (1170)
Q Consensus 977 ILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw 1053 (1170)
+.||++....||++...+-+-.... .+-..|.+|..+++.+++|+..+|+.||++|+++.-|..+++--.|..-+|
T Consensus 446 laYEIfg~~NPFY~rGem~L~~r~Y-qe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw~~~~~ 521 (598)
T KOG4158|consen 446 LAYEIFGRSNPFYKRGEMLLDTRTY-QESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLWRMGED 521 (598)
T ss_pred hHHHHhccCCcccccchheechhhh-hhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHhcCchH
Confidence 9999999999999844322211111 122456778999999999999999999999999877777887655554444
No 422
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=2.7e-20 Score=227.52 Aligned_cols=244 Identities=26% Similarity=0.366 Sum_probs=182.7
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc-cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD-MIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~-i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVM 837 (1170)
+|...+.||.+.|=+|.+|++. .|. |++|++-+.. ...-....+-+.|+. ...++|||.+.+..+-......|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 6888999999999999999875 454 8899987764 233333344445555 56678999999988777778899999
Q ss_pred eeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 838 EYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 838 EY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
+|+. -+|++.|.....+..-+-+.|+.|++.||.-+|..||+|+|||.|||||+.-+-+.|+||..-|......
T Consensus 101 qyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe----- 174 (1431)
T KOG1240|consen 101 QYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE----- 174 (1431)
T ss_pred HHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCC-----
Confidence 9995 4999999988888888999999999999999999999999999999999998899999998655422110
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-----------CCcchhhhHHHHHHHHHHh-CC
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG-----------HGATADWWSVGIILFELLI-GI 985 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~-----------ys~ksDIWSLGVILYELLT-G~ 985 (1170)
...+++.+- ..+..--.+|+|||.+.... .+++.||||+||+++||++ |+
T Consensus 175 ---DNPadf~fF---------------FDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~ 236 (1431)
T KOG1240|consen 175 ---DNPADFTFF---------------FDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR 236 (1431)
T ss_pred ---CCcccceEE---------------EecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence 001111100 00111224799999886522 5678899999999999987 89
Q ss_pred CCCCC-----------CCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC
Q 001057 986 PPFNA-----------KTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH 1045 (1170)
Q Consensus 986 pPF~g-----------~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH 1045 (1170)
|||.- .+.+..+++| -+..++.||..|++.||.+|++ |++.|+.
T Consensus 237 PlF~LSQL~aYr~~~~~~~e~~Le~I-------------ed~~~Rnlil~Mi~rdPs~RlS---AedyL~~ 291 (1431)
T KOG1240|consen 237 PLFTLSQLLAYRSGNADDPEQLLEKI-------------EDVSLRNLILSMIQRDPSKRLS---AEDYLQK 291 (1431)
T ss_pred CcccHHHHHhHhccCccCHHHHHHhC-------------cCccHHHHHHHHHccCchhccC---HHHHHHh
Confidence 99941 1222222222 1336789999999999999999 7777765
No 423
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=9e-19 Score=186.95 Aligned_cols=136 Identities=15% Similarity=0.203 Sum_probs=108.5
Q ss_pred EEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-----CCCcEEEEEeeeeccc---ce
Q 001057 762 IIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-----RNPFVVRFFYSFTCRE---NL 833 (1170)
Q Consensus 762 vlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-----~HPNIVrL~~~Fqd~~---~L 833 (1170)
-.+.||+|+||.||. ++.++.. +||++..... ...+.+.+|+.++..+ +||||+++|+++.++. .+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 356899999999995 7777666 6998765422 2346789999999999 5799999999999874 43
Q ss_pred E-EEEee--ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCCCCcEEeCCC----CcEEEEecCCc
Q 001057 834 Y-LVMEY--LNGGDLYSLLRNLGCLDEDMARVYIAELVLAL-EYLHSLNVIHRDLKPDNLLIGQD----GHIKLTDFGLS 905 (1170)
Q Consensus 834 y-LVMEY--~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~AL-eYLHs~GIIHRDIKPENILLd~d----G~VKLsDFGLA 905 (1170)
| +|||| +.+|+|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++.. +.++|+||+.+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 4 78999 5579999999764 57666 35678888888 99999999999999999999743 37999995444
Q ss_pred c
Q 001057 906 K 906 (1170)
Q Consensus 906 k 906 (1170)
.
T Consensus 157 ~ 157 (210)
T PRK10345 157 S 157 (210)
T ss_pred c
Confidence 3
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=3.4e-18 Score=177.61 Aligned_cols=137 Identities=29% Similarity=0.339 Sum_probs=113.5
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeecccc-----ccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADM-----IRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i-----~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
+.||+|++|.||+|.. .|..|++|+...... ........+.+|+.++..+.|++|+....++.+....++|||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5799999999999987 677899997653221 111223467889999999999988766666667778899999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
|++|++|.+++..... ....++.+++.+|.+||+.|++|||++|.|||++ ++.++|+|||++..
T Consensus 80 ~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999999875432 7778899999999999999999999999999999 78999999999874
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.7e-18 Score=215.13 Aligned_cols=202 Identities=24% Similarity=0.339 Sum_probs=161.0
Q ss_pred CCCCCCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC---CCcEEEEEee
Q 001057 750 CSKDRTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR---NPFVVRFFYS 826 (1170)
Q Consensus 750 ~~~~~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~---HPNIVrL~~~ 826 (1170)
.....+....|.|-+.||.|+||+||+|.... |+.||||+-+......-.... +++.+|+ -+.|..++.+
T Consensus 690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~------q~~~RLk~~~~~~~~~~~~a 762 (974)
T KOG1166|consen 690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICL------QVMERLKPQMLPSIMHISSA 762 (974)
T ss_pred cceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehH------HHHHhhchhhhcchHHHHHH
Confidence 33445667789999999999999999999876 999999987655433222222 2333333 2456666666
Q ss_pred eecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-------CCcEEE
Q 001057 827 FTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-------DGHIKL 899 (1170)
Q Consensus 827 Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-------dG~VKL 899 (1170)
+.-.+.-+||+||.+.|+|.+++...+.+++..+.+++.|++..++.||..+|||+||||+|+||.. .--++|
T Consensus 763 ~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 763 HVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred HccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEE
Confidence 6666777899999999999999998888999999999999999999999999999999999999953 235899
Q ss_pred EecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHH
Q 001057 900 TDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILF 979 (1170)
Q Consensus 900 sDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILY 979 (1170)
+|||-|-... +-..+......++|-.+--+|+..|..+++.+|.|.|..++|
T Consensus 843 IDfG~siDm~----------------------------lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h 894 (974)
T KOG1166|consen 843 IDFGRSIDMK----------------------------LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVH 894 (974)
T ss_pred Eecccceeee----------------------------EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHH
Confidence 9999875311 001223455678899999999999999999999999999999
Q ss_pred HHHhCCC
Q 001057 980 ELLIGIP 986 (1170)
Q Consensus 980 ELLTG~p 986 (1170)
.||.|+.
T Consensus 895 ~mLFG~y 901 (974)
T KOG1166|consen 895 VMLFGKY 901 (974)
T ss_pred HHHHHHH
Confidence 9999853
No 426
>smart00090 RIO RIO-like kinase.
Probab=99.76 E-value=2.9e-18 Score=185.65 Aligned_cols=144 Identities=21% Similarity=0.140 Sum_probs=115.0
Q ss_pred CeEEEEEeccCCCeEEEEee-ecCCCCEEEEEEeecccccc---------------------HHHHHHHHHHHHHHHhcC
Q 001057 759 DFEIIKPISQGAFGRVFLAR-KRATGDLFAIKVLKKADMIR---------------------KNAVESILAERNILISVR 816 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLAr-dk~TGe~VAIKvLkKs~i~~---------------------~~~ve~~l~EieILskL~ 816 (1170)
.|.+.+.||.|+||.||+|. +..+|+.||||++....... ......+..|+.++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 38888999999999999998 66799999999987543110 001234678999999997
Q ss_pred CC--cEEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCCCcEEeCC
Q 001057 817 NP--FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLN-VIHRDLKPDNLLIGQ 893 (1170)
Q Consensus 817 HP--NIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~G-IIHRDIKPENILLd~ 893 (1170)
+. .+.+++.. ...||||||++|++|...+.....+....+..++.||+.+|.+||++| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 53 34455432 235899999999888776544455677778899999999999999999 99999999999999
Q ss_pred CCcEEEEecCCccc
Q 001057 894 DGHIKLTDFGLSKV 907 (1170)
Q Consensus 894 dG~VKLsDFGLAk~ 907 (1170)
++.++|+|||+|..
T Consensus 184 ~~~i~LiDFg~a~~ 197 (237)
T smart00090 184 DGKVVIIDVSQSVE 197 (237)
T ss_pred CCCEEEEEChhhhc
Confidence 88999999999874
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=2.3e-19 Score=216.97 Aligned_cols=263 Identities=27% Similarity=0.411 Sum_probs=209.2
Q ss_pred CCCeEEEEEeccCCCeEEEEeeec-CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceE
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKR-ATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLY 834 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk-~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~Ly 834 (1170)
...|.+.+.||+|+|+.|-++... .+...+|+|.+.... .......++..|..+-..+. |+|++++++.....+..+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 567999999999999999998774 455677777765543 23345566677888888887 999999999999999999
Q ss_pred EEEeeccCCChHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCCCcEEeCCCC-cEEEEecCCcccccc
Q 001057 835 LVMEYLNGGDLYSLL-RNLG-CLDEDMARVYIAELVLALEYLH-SLNVIHRDLKPDNLLIGQDG-HIKLTDFGLSKVGLI 910 (1170)
Q Consensus 835 LVMEY~~GGSL~dlL-k~~~-~LSEe~ar~IaaQIL~ALeYLH-s~GIIHRDIKPENILLd~dG-~VKLsDFGLAk~~~~ 910 (1170)
++++|..|++++..+ .... ..+...+.+++.|+..+|.|+| ..++.||||||+|.+++..+ .++++|||+|.....
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 999999999999999 5544 6788889999999999999999 99999999999999999999 999999999985320
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccC-CCCCCchHHHhcC-CCCcchhhhHHHHHHHHHHhCCCCC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAG-TPDYLAPEILLGM-GHGATADWWSVGIILFELLIGIPPF 988 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vG-Tp~YmAPEVL~g~-~ys~ksDIWSLGVILYELLTG~pPF 988 (1170)
. ..........+| ++.|+|||...+. ..+...|+||.|+++.-|++|..|+
T Consensus 178 ~---------------------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~ 230 (601)
T KOG0590|consen 178 K---------------------------NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPW 230 (601)
T ss_pred c---------------------------CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCc
Confidence 0 112233445678 9999999999885 4578899999999999999999999
Q ss_pred CCCCHHHHH-HHHhccCCC-CCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCC
Q 001057 989 NAKTPQQIF-DNIMNRDIP-WPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKN 1050 (1170)
Q Consensus 989 ~g~~~~ei~-qkIl~~~l~-fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~ 1050 (1170)
......... ......... -......++..+.+++.++|..+|..|.+ .+++..+||+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s---~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 231 DFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLS---IEELKLDNWLSS 291 (601)
T ss_pred cccccccccceeecccccccccCccccCChhhhhcccccccCCchhccc---cccccccccccc
Confidence 754433211 111111111 01123578899999999999999999998 889999999987
No 428
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.7e-17 Score=169.70 Aligned_cols=133 Identities=25% Similarity=0.285 Sum_probs=106.7
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccccc-----cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKADMI-----RKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~-----~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
.||+|+||.||++.. +|..|++|+....... .......+.+|+.++..+.|+++.....++......++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 489999999999984 5788999986532211 122346678899999999987654443344556678999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
++|++|.+++..... .++.|++.+|.+||+.|++|+|++|.|||++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999998765321 7888999999999999999999999999999 89999999999874
No 429
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.2e-17 Score=180.97 Aligned_cols=250 Identities=21% Similarity=0.334 Sum_probs=195.1
Q ss_pred CCCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccce
Q 001057 754 RTSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENL 833 (1170)
Q Consensus 754 ~i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~L 833 (1170)
.+...+..++.+|...-.|..|+|++. |.-++.|++.-.+. .......|..|.--|+-+.||||+.+++++....++
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnl 262 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL 262 (448)
T ss_pred CcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence 355567778889999999999999886 44466787765433 333445788888888889999999999999999999
Q ss_pred EEEEeeccCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC-ee-eccCCCCcEEeCCCCcEEEEecCCccccc
Q 001057 834 YLVMEYLNGGDLYSLLRNLGC--LDEDMARVYIAELVLALEYLHSLN-VI-HRDLKPDNLLIGQDGHIKLTDFGLSKVGL 909 (1170)
Q Consensus 834 yLVMEY~~GGSL~dlLk~~~~--LSEe~ar~IaaQIL~ALeYLHs~G-II-HRDIKPENILLd~dG~VKLsDFGLAk~~~ 909 (1170)
.++..||+-|+|+.+|+.... .+..++..++..|+.|+.|||+.. +| ---|....++||++-+.+|+ .+-+++.
T Consensus 263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfs- 340 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFS- 340 (448)
T ss_pred eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceee-
Confidence 999999999999999987543 567788899999999999999985 33 34578889999988766653 1111110
Q ss_pred cccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCC---CcchhhhHHHHHHHHHHhCCC
Q 001057 910 IHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGH---GATADWWSVGIILFELLIGIP 986 (1170)
Q Consensus 910 ~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~y---s~ksDIWSLGVILYELLTG~p 986 (1170)
.......-.|.||+||.+...+- -.++|+|||.+++|||.|...
T Consensus 341 ---------------------------------fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trev 387 (448)
T KOG0195|consen 341 ---------------------------------FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREV 387 (448)
T ss_pred ---------------------------------eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccc
Confidence 00112234789999999987653 356899999999999999999
Q ss_pred CCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHH
Q 001057 987 PFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREV 1042 (1170)
Q Consensus 987 PF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEI 1042 (1170)
||...++++.--+|.-..+. +.+|..++.....|+.-|++.||.+||....+.-|
T Consensus 388 pfadlspmecgmkialeglr-v~ippgis~hm~klm~icmnedpgkrpkfdmivpi 442 (448)
T KOG0195|consen 388 PFADLSPMECGMKIALEGLR-VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPI 442 (448)
T ss_pred ccccCCchhhhhhhhhcccc-ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhh
Confidence 99999998887777655544 24668999999999999999999999985444333
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=4.3e-17 Score=169.67 Aligned_cols=137 Identities=20% Similarity=0.200 Sum_probs=108.2
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeecccccc-------------------HHHHHHHHHHHHHHHhcCCC--
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIR-------------------KNAVESILAERNILISVRNP-- 818 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~-------------------~~~ve~~l~EieILskL~HP-- 818 (1170)
|.+.+.||.|+||.||++... +|+.||||++....... .........|..++..+.|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 778899999999999999875 79999999876532100 01112367789999998877
Q ss_pred cEEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEE
Q 001057 819 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 819 NIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VK 898 (1170)
.++..+. ....|+||||++|++|..+... .....++.+++.++.++|+.||+||||||+||+++.++.++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 4444443 2345899999999998765431 34567888999999999999999999999999999999999
Q ss_pred EEecCCccc
Q 001057 899 LTDFGLSKV 907 (1170)
Q Consensus 899 LsDFGLAk~ 907 (1170)
|+|||+|..
T Consensus 166 liDfg~~~~ 174 (198)
T cd05144 166 IIDWPQMVS 174 (198)
T ss_pred EEECCcccc
Confidence 999999864
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=1.6e-16 Score=189.87 Aligned_cols=139 Identities=24% Similarity=0.233 Sum_probs=111.8
Q ss_pred CCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc-----cccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccc
Q 001057 758 EDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD-----MIRKNAVESILAERNILISVRNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 758 edYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~-----i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~ 832 (1170)
..|...+.||+|+||+||++..... .+++|+..... .......+.+.+|+.++..++|++|+..+.++.+...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3456788999999999999986543 34444332211 1111234578899999999999999887766777777
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
.++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||+ .++.++|+|||+|+.
T Consensus 411 ~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999886 346788999999999999999999999999999 678999999999985
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.68 E-value=1.8e-16 Score=161.69 Aligned_cols=137 Identities=21% Similarity=0.260 Sum_probs=99.5
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHH---------------------HHHHHHHHHHhcCCCc--
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVE---------------------SILAERNILISVRNPF-- 819 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve---------------------~~l~EieILskL~HPN-- 819 (1170)
.+.||+|+||+||+|.+. +|+.||||++............ ....|...+..+.+.+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 8999999998764321111111 1135666666665433
Q ss_pred EEEEEeeeecccceEEEEeeccCCChHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcE
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGGDLYS-LLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHI 897 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GGSL~d-lLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~V 897 (1170)
+.+.++. ...++||||++|+.+.. .+.... .. ..++.++.+++.++.++|. .||+||||||+||+++ ++.+
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~ 153 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV 153 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh-hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence 4444433 24689999999855432 122211 11 6678899999999999999 9999999999999999 8999
Q ss_pred EEEecCCccc
Q 001057 898 KLTDFGLSKV 907 (1170)
Q Consensus 898 KLsDFGLAk~ 907 (1170)
+|+|||.|..
T Consensus 154 ~liDfg~a~~ 163 (187)
T cd05119 154 YIIDVPQAVE 163 (187)
T ss_pred EEEECccccc
Confidence 9999999874
No 433
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=6.6e-17 Score=188.21 Aligned_cols=252 Identities=24% Similarity=0.293 Sum_probs=163.6
Q ss_pred CeEEEEEeccCCCeEEEEeeecCC---CCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEe-------eee
Q 001057 759 DFEIIKPISQGAFGRVFLARKRAT---GDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFY-------SFT 828 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~T---Ge~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~-------~Fq 828 (1170)
.+.+.+..+..++|.+...+.... .+.++-+... ...........+++-.+....|-+..-+.+ .+.
T Consensus 245 s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~---~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~ 321 (516)
T KOG1033|consen 245 SSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRAD---VDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSK 321 (516)
T ss_pred cccccccccccccCCchhhhhcccchhhhhccchhhh---ccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcc
Confidence 455556666777776665544332 2233322211 111123333444444444444333222221 111
Q ss_pred -----cccceEEEEeeccCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEE
Q 001057 829 -----CRENLYLVMEYLNGGDLYSLLRNLG---CLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 829 -----d~~~LyLVMEY~~GGSL~dlLk~~~---~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLs 900 (1170)
...++||.|++|...+|.++|.... ..+......++.|+..|++| +|.+|||+||.||+...+..+||.
T Consensus 322 ~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIg 398 (516)
T KOG1033|consen 322 RNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIG 398 (516)
T ss_pred ccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhh
Confidence 1236899999999999999997542 36677788899999999999 999999999999999999999999
Q ss_pred ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHH
Q 001057 901 DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 901 DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYE 980 (1170)
|||+........ +.. .........+||.+||+||.|.+..|+.++||||||+||||
T Consensus 399 DFgl~ts~~~~~-----------------------~~~-~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~E 454 (516)
T KOG1033|consen 399 DFGLVTSQDKDE-----------------------TVA-PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAE 454 (516)
T ss_pred hhhheeecccCC-----------------------ccc-chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHH
Confidence 999976421000 000 11123345689999999999999999999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 981 LLI-GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 981 LLT-G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
++. =..+|. ....+..|..+.++ .....-.++..+|+.+||...|.+||+ +.+.--|+|.
T Consensus 455 L~~~f~T~~e---r~~t~~d~r~g~ip--~~~~~d~p~e~~ll~~lls~~p~~RP~---~~~~~~~~~~ 515 (516)
T KOG1033|consen 455 LLIQFSTQFE---RIATLTDIRDGIIP--PEFLQDYPEEYTLLQQLLSPSPEERPS---AIEVALHEFL 515 (516)
T ss_pred HHHHhccHHH---HHHhhhhhhcCCCC--hHHhhcCcHHHHHHHHhcCCCcccCch---HHHHhhhhhc
Confidence 997 222332 22233344444443 111122345569999999999999996 5565556654
No 434
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=3e-15 Score=142.82 Aligned_cols=132 Identities=23% Similarity=0.309 Sum_probs=112.0
Q ss_pred EEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CcEEEEEeeeecccceEEEEee
Q 001057 762 IIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN--PFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 762 vlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H--PNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
+++.||.|+++.||++.... ..+++|.+..... ...+..|..++..+.| .++++++.++...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45789999999999999753 7899998765432 4567889999999976 5899999888888889999999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSL---NVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~---GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
+.|+.+..+ +......++.+++.+|.+||.. +++|+||+|.|||++..+.++++|||++..
T Consensus 75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 998877654 4556677888999999999985 799999999999999989999999999874
No 435
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=6.8e-15 Score=159.60 Aligned_cols=137 Identities=20% Similarity=0.338 Sum_probs=105.2
Q ss_pred EEec-cCCCeEEEEeeecCCCCEEEEEEeeccccc----------cHHHHHHHHHHHHHHHhcCCCcE--EEEEeeeecc
Q 001057 764 KPIS-QGAFGRVFLARKRATGDLFAIKVLKKADMI----------RKNAVESILAERNILISVRNPFV--VRFFYSFTCR 830 (1170)
Q Consensus 764 k~LG-~GgFGtVyLArdk~TGe~VAIKvLkKs~i~----------~~~~ve~~l~EieILskL~HPNI--VrL~~~Fqd~ 830 (1170)
..|| .||.|+||.+... +..++||.+...... .......+.+|+.++..+.|++| +..+.+....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3577 7888888888753 778999988653211 11233567889999999998775 5666554332
Q ss_pred cc----eEEEEeeccC-CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 831 EN----LYLVMEYLNG-GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 831 ~~----LyLVMEY~~G-GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
.. .+|||||++| .+|.+++.. ..+++.. +.||+.+|.+||++||+||||||+|||++.++.++|+|||.+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 22 3599999997 689888865 3566543 568999999999999999999999999999999999999998
Q ss_pred cc
Q 001057 906 KV 907 (1170)
Q Consensus 906 k~ 907 (1170)
..
T Consensus 190 ~~ 191 (239)
T PRK01723 190 EL 191 (239)
T ss_pred cc
Confidence 75
No 436
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.56 E-value=1.6e-14 Score=170.08 Aligned_cols=207 Identities=26% Similarity=0.349 Sum_probs=158.3
Q ss_pred HHhcCCCcEEEEEeeeecccceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCCCCcE
Q 001057 812 LISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVLALEYLHSLNV-IHRDLKPDNL 889 (1170)
Q Consensus 812 LskL~HPNIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~ALeYLHs~GI-IHRDIKPENI 889 (1170)
|+.+.|.|+.++++.+.+...+++|.+||..|+|.+.+... ..++.-....++++|+.||.|||...| .|+.+++.|.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC 80 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC 80 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence 35688999999999999999999999999999999999874 356777777788999999999998876 9999999999
Q ss_pred EeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCC-----
Q 001057 890 LIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMG----- 964 (1170)
Q Consensus 890 LLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~----- 964 (1170)
+++....+||+|||+...... ... ........-...|.|||.+.+..
T Consensus 81 lvd~~w~lklt~~Gl~~~~~~-----~~~-----------------------~~~~~~~~~~~lw~aPellr~~~~~~~~ 132 (484)
T KOG1023|consen 81 LVDSRWVLKLTDFGLNSLLEE-----TAE-----------------------PEAHHPIRKALLWTAPELLRGALSQSLE 132 (484)
T ss_pred eeeeeEEEEechhhhcccccc-----ccc-----------------------ccccchhHHHHhccCHHHhccccccccc
Confidence 999999999999999765210 000 00000111234699999998742
Q ss_pred --CCcchhhhHHHHHHHHHHhCCCCCCC----CCHHHHHHHHhc-cCC-CCCCCC--ccCCHHHHHHHHHhccCCCCCCC
Q 001057 965 --HGATADWWSVGIILFELLIGIPPFNA----KTPQQIFDNIMN-RDI-PWPNIP--EEMSVEACDLIDKLLTENPVQRL 1034 (1170)
Q Consensus 965 --ys~ksDIWSLGVILYELLTG~pPF~g----~~~~ei~qkIl~-~~l-~fP~ip--~~lS~eakDLIkkLLq~DPskRp 1034 (1170)
.+.+.||||+|+++||+++...||.. .++.++...+.+ +.- .-|.+. ..+.+++..++..|+..+|.+||
T Consensus 133 ~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rP 212 (484)
T KOG1023|consen 133 SALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRP 212 (484)
T ss_pred ccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCc
Confidence 35568999999999999999999975 234567766666 221 122222 14566899999999999999999
Q ss_pred ChhhHHHHHcCC
Q 001057 1035 GATGAREVKQHP 1046 (1170)
Q Consensus 1035 Sa~~AeEILqHP 1046 (1170)
+...+...+.-.
T Consensus 213 s~~~i~~~~~~~ 224 (484)
T KOG1023|consen 213 SIEQIRSKLLTI 224 (484)
T ss_pred cHHHHHhhhhhh
Confidence 976665555443
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=4.7e-13 Score=158.41 Aligned_cols=266 Identities=24% Similarity=0.250 Sum_probs=195.7
Q ss_pred CCCCCeEEEEEecc--CCCeEEEEeee--cCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeec
Q 001057 755 TSIEDFEIIKPISQ--GAFGRVFLARK--RATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTC 829 (1170)
Q Consensus 755 i~iedYevlk~LG~--GgFGtVyLArd--k~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd 829 (1170)
.....|.+...+|. |.+|.||.++. ..++..+|+|.-+... .......+=++|..-...++ |+|.++.+..+..
T Consensus 111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCccccc
Confidence 34456778889999 99999999998 8899999999733211 11111223345555555665 8999999999999
Q ss_pred ccceEEEEeeccCCChHHHHHhcCC-CCHHHHHHHHHHHHH----HHHHHHhCCeeeccCCCCcEEeCCC-CcEEEEecC
Q 001057 830 RENLYLVMEYLNGGDLYSLLRNLGC-LDEDMARVYIAELVL----ALEYLHSLNVIHRDLKPDNLLIGQD-GHIKLTDFG 903 (1170)
Q Consensus 830 ~~~LyLVMEY~~GGSL~dlLk~~~~-LSEe~ar~IaaQIL~----ALeYLHs~GIIHRDIKPENILLd~d-G~VKLsDFG 903 (1170)
.+.+|+-+|+| |.+|..+...... +++..++.++.+... ||.++|+.+|+|-|+||+||++..+ ...+++|||
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred CCcceeeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 99999999999 5788888876544 889999999999999 9999999999999999999999999 789999999
Q ss_pred CccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh
Q 001057 904 LSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI 983 (1170)
Q Consensus 904 LAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 983 (1170)
+..... .+++. ..........|..-|++||++.+ -++...|||+||.++.+-.+
T Consensus 269 ~v~~i~-------------~~~~~------------~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l 322 (524)
T KOG0601|consen 269 LVSKIS-------------DGNFS------------SVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAIL 322 (524)
T ss_pred eeEEcc-------------CCccc------------cceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHh
Confidence 987531 11100 01111123356778999999865 58899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCCh
Q 001057 984 GIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINW 1053 (1170)
Q Consensus 984 G~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idw 1053 (1170)
|..++........ ..+.+..++ .++-...+..+...+..|+..+|..|++ +..+++|++.....+
T Consensus 323 ~~~~~~~g~~~~W-~~~r~~~ip-~e~~~~~s~~l~~~~~~~~d~~~~~~~~---~q~~~~l~~i~s~~~ 387 (524)
T KOG0601|consen 323 GSHLPSVGKNSSW-SQLRQGYIP-LEFCEGGSSSLRSVTSQMLDEDPRLRLT---AQILTALNVIHSKLF 387 (524)
T ss_pred hcccccCCCCCCc-cccccccCc-hhhhcCcchhhhhHHHHhcCcchhhhhH---HHHHhccccccchhh
Confidence 8776643311111 111111111 1122355677777999999999999998 788999999886543
No 438
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.36 E-value=4.7e-13 Score=160.47 Aligned_cols=144 Identities=22% Similarity=0.355 Sum_probs=97.0
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc--------------------------c-----HHHHHHH
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI--------------------------R-----KNAVESI 805 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~--------------------------~-----~~~ve~~ 805 (1170)
..+|+. +.||.|++|+||.|+.+.+|+.||||+++..-.. + .+....+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 7899999999999999888999999998753100 0 0112223
Q ss_pred HHHHH------HHHhcC----CCcEEEEEeeeec-ccceEEEEeeccCCChHHH--HHhcC----CCCHHHHHHHHHHHH
Q 001057 806 LAERN------ILISVR----NPFVVRFFYSFTC-RENLYLVMEYLNGGDLYSL--LRNLG----CLDEDMARVYIAELV 868 (1170)
Q Consensus 806 l~Eie------ILskL~----HPNIVrL~~~Fqd-~~~LyLVMEY~~GGSL~dl--Lk~~~----~LSEe~ar~IaaQIL 868 (1170)
.+|++ .+.++. +...+.+-.+|.+ ....+|||||+.|+.|.++ +...+ .+.+..+..++.|++
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 33333 333332 3222322222222 3346799999999999774 33333 255555666666654
Q ss_pred HHHHHHHhCCeeeccCCCCcEEeCCCC----cEEEEecCCcccc
Q 001057 869 LALEYLHSLNVIHRDLKPDNLLIGQDG----HIKLTDFGLSKVG 908 (1170)
Q Consensus 869 ~ALeYLHs~GIIHRDIKPENILLd~dG----~VKLsDFGLAk~~ 908 (1170)
..|++|+|+||.||+++.+| .++++|||++...
T Consensus 278 -------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 278 -------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred -------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 58999999999999999888 9999999998753
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=7e-12 Score=147.44 Aligned_cols=138 Identities=25% Similarity=0.333 Sum_probs=94.8
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeecccccc---------------------------HHHH----------HHHH
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIR---------------------------KNAV----------ESIL 806 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~---------------------------~~~v----------e~~l 806 (1170)
+.||.|++|+||+|+.+ +|+.||||+.+...... .... -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999874 79999999975431000 0000 0234
Q ss_pred HHHHHHHhcC-----CCcE--EEEEeeeecccceEEEEeeccCCChHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHhC
Q 001057 807 AERNILISVR-----NPFV--VRFFYSFTCRENLYLVMEYLNGGDLYSLLRNL-GCLDEDMARVYIAELVL-ALEYLHSL 877 (1170)
Q Consensus 807 ~EieILskL~-----HPNI--VrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~-~~LSEe~ar~IaaQIL~-ALeYLHs~ 877 (1170)
+|...+..+. +++| .++|..+ ....+|||||++|++|.++.... ..+. ...++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence 4555555442 3433 2333222 33468999999999998876532 1222 2334555554 47789999
Q ss_pred CeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 878 NVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 878 GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
|++|+|+||.||+++.+|.++|+|||++..
T Consensus 277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~ 306 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKIIALDFGIVGR 306 (437)
T ss_pred CceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence 999999999999999999999999999875
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=4.9e-12 Score=126.62 Aligned_cols=128 Identities=19% Similarity=0.312 Sum_probs=96.0
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE-EEEEeeeecccceEEEEeecc
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFV-VRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNI-VrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
++.|+.|.++.||+++.. +..|++|+...... ....+..|..++..+.+.++ .+++..+. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 567899999999999864 77899998754321 11245678888888765444 34554432 34589999999
Q ss_pred CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-----eeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 842 GGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNV-----IHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 842 GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GI-----IHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
|.++... ......++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.|..
T Consensus 75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887653 01123456799999999999985 9999999999998 67899999999874
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.27 E-value=6.2e-11 Score=142.18 Aligned_cols=183 Identities=20% Similarity=0.351 Sum_probs=135.8
Q ss_pred eEEEEEeccCCCeEEE-EeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEe
Q 001057 760 FEIIKPISQGAFGRVF-LARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVME 838 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVy-LArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVME 838 (1170)
|++ ...+-++.+ || .|..+.++.+|.+.+++.... ...+.+.+-+.-|+.++||||++++..+...+++|||+|
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTE 89 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTE 89 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEee
Confidence 444 333334444 33 466678899999998876542 445667778888999999999999999999999999999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCC
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLH-SLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLS 917 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLH-s~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~ 917 (1170)
-+. .|..++++.+ ...+..-+.||+.||.||| +.+++|++|.-..|+|+..|+.||.+|.++....
T Consensus 90 rV~--Pl~~~lk~l~---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~-------- 156 (690)
T KOG1243|consen 90 RVR--PLETVLKELG---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKAS-------- 156 (690)
T ss_pred ccc--cHHHHHHHhH---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccc--------
Confidence 884 6777887644 6667777889999999998 6789999999999999999999999999875310
Q ss_pred CCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhC
Q 001057 918 APSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIG 984 (1170)
Q Consensus 918 a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG 984 (1170)
.. + . ......---.|..|+.+.... ...|.|-|||+++|++.|
T Consensus 157 --~~--~---------------~---~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 157 --GF--N---------------A---PAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --cC--C---------------c---ccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence 00 0 0 000111122366676654332 568999999999999998
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.27 E-value=3.9e-11 Score=127.74 Aligned_cols=139 Identities=20% Similarity=0.165 Sum_probs=100.6
Q ss_pred EEeccCCCeEEEEeeecC------CCCEEEEEEeeccccc-------------------cHHHHHH----HHHHHHHHHh
Q 001057 764 KPISQGAFGRVFLARKRA------TGDLFAIKVLKKADMI-------------------RKNAVES----ILAERNILIS 814 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~------TGe~VAIKvLkKs~i~-------------------~~~~ve~----~l~EieILsk 814 (1170)
..||.|--+.||.|.... .+..+|||+++..... ..+.... ..+|...|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998653 3579999987632100 0111223 3489999988
Q ss_pred cCC--CcEEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCeeeccCCCCcEEe
Q 001057 815 VRN--PFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYL-HSLNVIHRDLKPDNLLI 891 (1170)
Q Consensus 815 L~H--PNIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYL-Hs~GIIHRDIKPENILL 891 (1170)
+.. -++..++++ ..-+|||||+.++.+..-.-+...+++..+..+..+++.+|.+| |+.||||+||++.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 863 355556543 34589999997654432222223466667777889999999999 89999999999999999
Q ss_pred CCCCcEEEEecCCccc
Q 001057 892 GQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 892 d~dG~VKLsDFGLAk~ 907 (1170)
+ ++.+.|+|||.|..
T Consensus 159 ~-~~~v~iIDF~qav~ 173 (197)
T cd05146 159 H-DGKVWFIDVSQSVE 173 (197)
T ss_pred E-CCcEEEEECCCcee
Confidence 6 57899999998874
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.25 E-value=5.8e-12 Score=149.28 Aligned_cols=251 Identities=26% Similarity=0.294 Sum_probs=185.5
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeec-CCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEEEEeeeecccc
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKR-ATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVRFFYSFTCREN 832 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk-~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVrL~~~Fqd~~~ 832 (1170)
....+|..+..||.|.|+.|+.+... .++..|++|.+.+........+ .-+.|+.+...+ .|.++++++..|...++
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 34568999999999999999998765 6788999998766543332222 234566666555 48999999988888888
Q ss_pred eEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCC-CcEEEEecCCccccccc
Q 001057 833 LYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQD-GHIKLTDFGLSKVGLIH 911 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~d-G~VKLsDFGLAk~~~~~ 911 (1170)
.|+-.|||.++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||.++.....
T Consensus 341 ~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred ccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee
Confidence 89999999999888777555568889999999999999999999999999999999999886 67899999987632110
Q ss_pred cCCCCCCCCCCCCCccccccccCCCCCcccccccccccC-CCCC-CchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCC
Q 001057 912 STDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAG-TPDY-LAPEILLGMGHGATADWWSVGIILFELLIGIPPFN 989 (1170)
Q Consensus 912 ~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vG-Tp~Y-mAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~ 989 (1170)
. ....+ +..| .++..+....+..++|++|||..+++.++|.+.=.
T Consensus 421 ~---------------------------------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 421 S---------------------------------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred c---------------------------------ccccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence 0 01112 2333 35555566778999999999999999999865322
Q ss_pred CCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCC
Q 001057 990 AKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFF 1048 (1170)
Q Consensus 990 g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF 1048 (1170)
... ....|..+..+ .. .....++..+.+.++..++..|+. +.++..|.=|
T Consensus 468 ~~~---~~~~i~~~~~p--~~-~~~~~~~q~~~kv~~~~~~~~~~l---~~~l~~~~~~ 517 (524)
T KOG0601|consen 468 SGV---QSLTIRSGDTP--NL-PGLKLQLQVLLKVMINPDRKRRPS---AVELSLHSEF 517 (524)
T ss_pred ccc---cceeeeccccc--CC-CchHHhhhhhhhhhcCCccccchh---hhhhcccchh
Confidence 211 12233444443 22 334488999999999999999988 6666666544
No 444
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=9.5e-11 Score=131.10 Aligned_cols=250 Identities=23% Similarity=0.313 Sum_probs=164.1
Q ss_pred EEEEeeecCCCCEEEEEEeecccccc-HHHHHHHHHHHHHHHhcCCCcEEEEEeeeeccc-----ceEEEEeeccCCChH
Q 001057 773 RVFLARKRATGDLFAIKVLKKADMIR-KNAVESILAERNILISVRNPFVVRFFYSFTCRE-----NLYLVMEYLNGGDLY 846 (1170)
Q Consensus 773 tVyLArdk~TGe~VAIKvLkKs~i~~-~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~-----~LyLVMEY~~GGSL~ 846 (1170)
.||++.+...|..|.--.+....... ..+.+....-..-|.++.|-|||+++.++.+.. ...++.|||..|+|.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 46777666666554332221111000 111122223334456677999999998876653 488999999999999
Q ss_pred HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCC
Q 001057 847 SLLRNL----GCLDEDMARVYIAELVLALEYLHSLN--VIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPS 920 (1170)
Q Consensus 847 dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~G--IIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~s 920 (1170)
.+|++. ..+.....+.|+.||+.||.|||+.. |+|+++...-|++..+|.||+.---.... .+.
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~----------h~s 230 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDST----------HPS 230 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCcccc----------chh
Confidence 999754 35788888999999999999999985 99999999999999999888742111100 000
Q ss_pred CCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCC-CCCCCHHHHHHH
Q 001057 921 LGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPP-FNAKTPQQIFDN 999 (1170)
Q Consensus 921 l~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pP-F~g~~~~ei~qk 999 (1170)
. + ...........|-++|.|||.=.....+.++|||++|....+|..|..- -.+.+..+.-..
T Consensus 231 ~-------~---------~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ 294 (458)
T KOG1266|consen 231 V-------N---------STREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEEN 294 (458)
T ss_pred h-------h---------hhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhh
Confidence 0 0 0011112223467899999976656677889999999999999987654 233322222222
Q ss_pred HhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhh
Q 001057 1000 IMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFKNINWDTLA 1057 (1170)
Q Consensus 1000 Il~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~ 1057 (1170)
|.+..+.. -...-+++|.+||+..|..||+ +.+++.||.+=++.-..+.
T Consensus 295 ia~~i~~l------en~lqr~~i~kcl~~eP~~rp~---ar~llfHpllfeVhslkll 343 (458)
T KOG1266|consen 295 IANVIIGL------ENGLQRGSITKCLEGEPNGRPD---ARLLLFHPLLFEVHSLKLL 343 (458)
T ss_pred hhhheeec------cCccccCcCcccccCCCCCCcc---hhhhhcCceeeecchHHHH
Confidence 22211111 1122357899999999999998 8899999988776655443
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=5.1e-10 Score=115.95 Aligned_cols=140 Identities=19% Similarity=0.250 Sum_probs=105.2
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC--CcEEEEEeeeecc---cceEEEEe
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN--PFVVRFFYSFTCR---ENLYLVME 838 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H--PNIVrL~~~Fqd~---~~LyLVME 838 (1170)
+.||.|.++.||++... +|+.|++|+....... .....+..|..++..+.+ .++.+++.+.... +..|+|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 57899999999999874 3678999987654321 123467889999999875 3456666665553 36789999
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh------------------------------------------
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS------------------------------------------ 876 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs------------------------------------------ 876 (1170)
|++|.+|...+.. ..+++.....++.+++.+|.+||+
T Consensus 81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9999888775532 346666666777777777777773
Q ss_pred --------------CCeeeccCCCCcEEeCC--CCcEEEEecCCccc
Q 001057 877 --------------LNVIHRDLKPDNLLIGQ--DGHIKLTDFGLSKV 907 (1170)
Q Consensus 877 --------------~GIIHRDIKPENILLd~--dG~VKLsDFGLAk~ 907 (1170)
..++|+|++|.|||++. ++.+.|+||+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 66789999998874
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=1e-09 Score=115.87 Aligned_cols=133 Identities=26% Similarity=0.270 Sum_probs=98.3
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeec-----cccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEEEee
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKK-----ADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEY 839 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkK-----s~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLVMEY 839 (1170)
.+++|+-+.+|.+... |..+.+|.=.+ ..+...-......+|..+|.++.--.|..-+-++.+.+...|+|||
T Consensus 3 ~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 3 LIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred hhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 5789999999988653 54566665222 2222223345678899999988754443333335566777899999
Q ss_pred ccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 840 LNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 840 ~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
++|..|.+.+... .-.++..|=.-+.-||.+||+|+||.++||++..++ +.++||||+..
T Consensus 81 I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888765 134666777778889999999999999999997654 99999999985
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.93 E-value=8.3e-09 Score=108.99 Aligned_cols=144 Identities=24% Similarity=0.246 Sum_probs=105.8
Q ss_pred EEEEeccCCCeEEEEeeecCCCCEEEEEEee-----ccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecccceEEE
Q 001057 762 IIKPISQGAFGRVFLARKRATGDLFAIKVLK-----KADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLV 836 (1170)
Q Consensus 762 vlk~LG~GgFGtVyLArdk~TGe~VAIKvLk-----Ks~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~~~LyLV 836 (1170)
.+..|-+|+-+.|+.+.. .|+.+.||.=. -..+...-...+..+|+.+|.++.--.|.--.-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567788999999998875 58888888522 22222233445788899999988754443322336666677899
Q ss_pred EeeccC-CChHHHHHhcC-C-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC---cEEEEecCCccc
Q 001057 837 MEYLNG-GDLYSLLRNLG-C-LDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG---HIKLTDFGLSKV 907 (1170)
Q Consensus 837 MEY~~G-GSL~dlLk~~~-~-LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG---~VKLsDFGLAk~ 907 (1170)
|||++| .++.+++.... . ........++..|-..|.-||.++|||+||..+||+|..+| .+.|+|||++..
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 999976 47888886542 2 23333367888999999999999999999999999997765 358999999864
No 448
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.76 E-value=4.6e-08 Score=103.71 Aligned_cols=127 Identities=23% Similarity=0.276 Sum_probs=83.2
Q ss_pred EEEEeeecCCCCEEEEEEeecccc-----------------------ccHHHHHHHHHHHHHHHhcCCC--cEEEEEeee
Q 001057 773 RVFLARKRATGDLFAIKVLKKADM-----------------------IRKNAVESILAERNILISVRNP--FVVRFFYSF 827 (1170)
Q Consensus 773 tVyLArdk~TGe~VAIKvLkKs~i-----------------------~~~~~ve~~l~EieILskL~HP--NIVrL~~~F 827 (1170)
.||.|.. ..|..+|||+.+.... ..........+|...|..+..- ++.+++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 4677999998764210 0111235678899999999865 456666432
Q ss_pred ecccceEEEEeecc--CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCeeeccCCCCcEEeCCCCcEEEEecCC
Q 001057 828 TCRENLYLVMEYLN--GGDLYSLLRNLGCLDEDMARVYIAELVLALEY-LHSLNVIHRDLKPDNLLIGQDGHIKLTDFGL 904 (1170)
Q Consensus 828 qd~~~LyLVMEY~~--GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeY-LHs~GIIHRDIKPENILLd~dG~VKLsDFGL 904 (1170)
.-+|||||++ |..+..+.... ++.+....++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+|||.
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~q 152 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQ 152 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTT
T ss_pred ----CCEEEEEecCCCccchhhHHhcc--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCc
Confidence 3479999998 65555544322 2244556677788885555 579999999999999999876 899999998
Q ss_pred ccc
Q 001057 905 SKV 907 (1170)
Q Consensus 905 Ak~ 907 (1170)
|..
T Consensus 153 av~ 155 (188)
T PF01163_consen 153 AVD 155 (188)
T ss_dssp EEE
T ss_pred cee
Confidence 874
No 449
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=98.72 E-value=4.3e-09 Score=118.68 Aligned_cols=83 Identities=4% Similarity=-0.087 Sum_probs=75.5
Q ss_pred ccccccCCCcccccccccCCCCCcceeecCCcEEEEEcC--ccccccCCCCCchHhhhh---hhcccccccCCCcccccC
Q 001057 551 THDDLNLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDL--NVLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTP 625 (1170)
Q Consensus 551 ~~~~~~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~--~~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ld 625 (1170)
.+.++-+-.-+|+.+++||+.||.||+|++|+|+|...+ ..| .++.|.-|||+||+ ||||||.|.+..++-.+|
T Consensus 260 ~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~~v~v-kl~~~dyfge~al~~~~pr~Atv~a~~~~kc~~~d 338 (368)
T KOG1113|consen 260 ADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRDGVEV-KLKKGDYFGELALLKNLPRAATVVAKGRLKCAKLD 338 (368)
T ss_pred hcccceeeccCCceEEeccCCcceEEEecccccchhhccCCeEE-EechhhhcchHHHHhhchhhceeeccCCceeeeeC
Confidence 678888999999999999999999999999999999765 345 89999999999999 999999999999999999
Q ss_pred Cchhhhhhhhhhhhhcc
Q 001057 626 RTSQIELLVNGHRTITE 642 (1170)
Q Consensus 626 R~~~~~~~~~tfr~Il~ 642 (1170)
| .+|.+.|.
T Consensus 339 k--------~~ferllg 347 (368)
T KOG1113|consen 339 K--------PRFERLLG 347 (368)
T ss_pred h--------HHHHHHhh
Confidence 9 78877663
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.68 E-value=3.3e-07 Score=108.26 Aligned_cols=217 Identities=20% Similarity=0.237 Sum_probs=152.4
Q ss_pred CeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEEEEEeeeec----ccceEEEEeeccC-CCh
Q 001057 771 FGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTC----RENLYLVMEYLNG-GDL 845 (1170)
Q Consensus 771 FGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd----~~~LyLVMEY~~G-GSL 845 (1170)
-.+.|+|....+|..|++|.+...+.... .....-+++++++.|+|||++..+|.+ +..+++|++|.++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 34689999999999999999843322111 123345678899999999999999884 3468999999986 578
Q ss_pred HHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCcccccc
Q 001057 846 YSLLRN---------------LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLI 910 (1170)
Q Consensus 846 ~dlLk~---------------~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~ 910 (1170)
+++--. ....+|...+.|+.|+..||.++|+.|+..+-|.|.+||++.+-.++|...|......
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~- 444 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ- 444 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec-
Confidence 776521 1246789999999999999999999999999999999999988888888777654321
Q ss_pred ccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCC-CC
Q 001057 911 HSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPP-FN 989 (1170)
Q Consensus 911 ~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pP-F~ 989 (1170)
.+ . + +.+.+ -.+-|.=.||.+++.|.||.-- +.
T Consensus 445 ------------------~d-----------~-------~-------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~ 478 (655)
T KOG3741|consen 445 ------------------ED-----------P-------T-------EPLES---QQQNDLRDLGLLLLALATGTENSNR 478 (655)
T ss_pred ------------------CC-----------C-------C-------cchhH---HhhhhHHHHHHHHHHHhhccccccc
Confidence 00 0 0 11111 1356888999999999999532 22
Q ss_pred CCCHHHH-HHHHhccCCCCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcC---CCCCCC
Q 001057 990 AKTPQQI-FDNIMNRDIPWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQH---PFFKNI 1051 (1170)
Q Consensus 990 g~~~~ei-~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqH---PfF~~i 1051 (1170)
....+.. ...| ....+.+++++|.-+...++.. -+ +.+++.| .||..+
T Consensus 479 ~d~~~~s~~~~I----------~~~yS~D~rn~v~yl~s~~~~~-ks---I~~llp~~~~~ff~vm 530 (655)
T KOG3741|consen 479 TDSTQSSHLTRI----------TTTYSTDLRNVVEYLESLNFRE-KS---IQDLLPMIGSRFFTVM 530 (655)
T ss_pred ccchHHHHHHHh----------hhhhhHHHHHHHHHHHhcCccc-cc---HHHHHHHHHHHHHHHH
Confidence 2222222 2222 2457889999999999988884 23 4455544 455433
No 451
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.68 E-value=1.3e-08 Score=123.00 Aligned_cols=168 Identities=20% Similarity=0.326 Sum_probs=120.4
Q ss_pred HHHHHHHHHHhC-CeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccc
Q 001057 866 ELVLALEYLHSL-NVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQ 944 (1170)
Q Consensus 866 QIL~ALeYLHs~-GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~ 944 (1170)
+++.||.|+|.. ++||+.|.|++|.++.+|.+||+.|+++.... .. .. ++-. ...+. .
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~--~~----------~~-~p~~--~yd~~------l 165 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNAN--GP----------TE-YPFS--EYDPP------L 165 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccC--CC----------Cc-cccc--cCCCC------C
Confidence 556999999965 89999999999999999999999999986421 00 00 0000 00111 1
Q ss_pred cccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHH-hCCCCCCCCCHHHHHHHHh-ccCCCCCCCCccCCHHHHHHH
Q 001057 945 KHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELL-IGIPPFNAKTPQQIFDNIM-NRDIPWPNIPEEMSVEACDLI 1022 (1170)
Q Consensus 945 ~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELL-TG~pPF~g~~~~ei~qkIl-~~~l~fP~ip~~lS~eakDLI 1022 (1170)
.....-...|.|||++.+...+.++|+|||||++|.+. .|+.-|.+......+..-. ..+.........++.++++=|
T Consensus 166 p~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l 245 (700)
T KOG2137|consen 166 PLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESL 245 (700)
T ss_pred ChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHH
Confidence 11223467899999999988899999999999999998 5666666554333332211 122222223478999999999
Q ss_pred HHhccCCCCCCCChhhHHHHHcCCCCCCCChhhhh
Q 001057 1023 DKLLTENPVQRLGATGAREVKQHPFFKNINWDTLA 1057 (1170)
Q Consensus 1023 kkLLq~DPskRpSa~~AeEILqHPfF~~idwe~L~ 1057 (1170)
.++|..++.-||+ +..++.-|||.+..-.+|.
T Consensus 246 ~k~l~~~~~~rp~---~~~l~~~~ff~D~~~~aLr 277 (700)
T KOG2137|consen 246 KKLLNGDSAVRPT---LDLLLSIPFFSDPGLKALR 277 (700)
T ss_pred HHHhcCCcccCcc---hhhhhcccccCCchhhhhh
Confidence 9999999999996 8899999999987555444
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.67 E-value=2.1e-07 Score=103.63 Aligned_cols=126 Identities=14% Similarity=0.130 Sum_probs=88.1
Q ss_pred CCCEEEEEEeeccccc---cH-----HHHHHHHHHHHHHHhcCCCcE--EEEEeeeec-----ccceEEEEeeccCC-Ch
Q 001057 782 TGDLFAIKVLKKADMI---RK-----NAVESILAERNILISVRNPFV--VRFFYSFTC-----RENLYLVMEYLNGG-DL 845 (1170)
Q Consensus 782 TGe~VAIKvLkKs~i~---~~-----~~ve~~l~EieILskL~HPNI--VrL~~~Fqd-----~~~LyLVMEY~~GG-SL 845 (1170)
.|+.|.||........ .. .-...+.+|...+..|..-+| +.+..++.. ...-+||||++++. +|
T Consensus 44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL 123 (268)
T PRK15123 44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISL 123 (268)
T ss_pred CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccH
Confidence 4667888865432210 00 011136788888877753222 222222322 23468999999876 79
Q ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCC-------CCcEEEEecCCccc
Q 001057 846 YSLLRN--LGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQ-------DGHIKLTDFGLSKV 907 (1170)
Q Consensus 846 ~dlLk~--~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~-------dG~VKLsDFGLAk~ 907 (1170)
.+++.. ....+......++.+++..+.-||.+||+|+|+++.|||++. ++.+.|+||+.+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 124 EDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred HHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 888864 234667778889999999999999999999999999999975 46899999998863
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=5.3e-07 Score=95.99 Aligned_cols=105 Identities=27% Similarity=0.326 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHhcCCCcE--EEEEeeeecc----cceEEEEeeccCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001057 803 ESILAERNILISVRNPFV--VRFFYSFTCR----ENLYLVMEYLNGG-DLYSLLRNLGCLDEDMARVYIAELVLALEYLH 875 (1170)
Q Consensus 803 e~~l~EieILskL~HPNI--VrL~~~Fqd~----~~LyLVMEY~~GG-SL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLH 875 (1170)
....+|...+..|..-+| ...+.+.... ...|||||+++|. +|.+++.....++......++.++...+.-||
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH 135 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH 135 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence 356777777776653222 3333333322 2458999999874 89999987555778888899999999999999
Q ss_pred hCCeeeccCCCCcEEeCCCC---cEEEEecCCccc
Q 001057 876 SLNVIHRDLKPDNLLIGQDG---HIKLTDFGLSKV 907 (1170)
Q Consensus 876 s~GIIHRDIKPENILLd~dG---~VKLsDFGLAk~ 907 (1170)
.+||+|+|+++.|||++.++ .+.|+||+-++.
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 99999999999999999887 899999998875
No 454
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=98.50 E-value=8.8e-08 Score=112.15 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=70.2
Q ss_pred CCcccccccccCCCCCcceeecCCcEEEEEcCc------cccccCCCCCchHhhhh---hhcccccccCC-CcccccCCc
Q 001057 558 MSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDLN------VLPEISCDKNPTAADIA---AKTSSAGSLTP-RSPLLTPRT 627 (1170)
Q Consensus 558 ~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~~------~v~~~~~g~sFGELAL~---pRAATv~A~t~-~~lw~ldR~ 627 (1170)
---+|++|||||+.||.||||-.|+|.|...++ .|.+...|+.|||=||+ -|+|.+.|..+ +.+..|||
T Consensus 299 ~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e~~~q~~~lr~l~kGd~FGE~al~~edvRtAniia~~~gv~cl~lDr- 377 (732)
T KOG0614|consen 299 YYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDEGSTQPQELRTLNKGDYFGERALLGEDVRTANIIAQAPGVECLTLDR- 377 (732)
T ss_pred hhcCCceEEeecCCCCeEEEEecceEEEeecCCCCCchhHHhhccccchhhHHHhhccCccchhhhccCCCceEEEecH-
Confidence 345799999999999999999999999997653 58999999999999999 99999999998 78999999
Q ss_pred hhhhhhhhhhhhhccC
Q 001057 628 SQIELLVNGHRTITEL 643 (1170)
Q Consensus 628 ~~~~~~~~tfr~Il~~ 643 (1170)
++|.+.+-.
T Consensus 378 -------esF~~liG~ 386 (732)
T KOG0614|consen 378 -------ESFKKLIGD 386 (732)
T ss_pred -------HHHHHhccc
Confidence 999887754
No 455
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=98.45 E-value=2.8e-08 Score=89.18 Aligned_cols=79 Identities=13% Similarity=-0.011 Sum_probs=70.7
Q ss_pred CCCcccccccccCCCCCcceeecCCcEEEEEcC---c--cccccCCCCCchHhhhh---hhcccccccCCCcccccCCch
Q 001057 557 LMSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDL---N--VLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTPRTS 628 (1170)
Q Consensus 557 ~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~---~--~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ldR~~ 628 (1170)
+..+||..|++||+..+.+|+|.+|.+.++... + .+..+.+|+.||+.+++ |+.+++.|.+++.+|.|++
T Consensus 2 ~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~-- 79 (91)
T PF00027_consen 2 KTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFLGPGDIFGEIELLTGKPSPFTVIALTDSEVLRIPR-- 79 (91)
T ss_dssp EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEEETTEEESGHHHHHTSBBSSEEEESSSEEEEEEEH--
T ss_pred eEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecceeeeccccceeecCCCccEEEEEEccCEEEEEEeH--
Confidence 457899999999999999999999999999753 2 37899999999999999 8999999999999999999
Q ss_pred hhhhhhhhhhhhccC
Q 001057 629 QIELLVNGHRTITEL 643 (1170)
Q Consensus 629 ~~~~~~~tfr~Il~~ 643 (1170)
..|..++..
T Consensus 80 ------~~~~~~~~~ 88 (91)
T PF00027_consen 80 ------EDFLQLLQQ 88 (91)
T ss_dssp ------HHHHHHHHH
T ss_pred ------HHHHHHHHh
Confidence 888877653
No 456
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=98.44 E-value=1.3e-07 Score=97.16 Aligned_cols=83 Identities=14% Similarity=0.015 Sum_probs=74.6
Q ss_pred ccccCCCcccccccccCCCCCcceeecCCcEEEEEcC---c--cccccCCCCCchHhhhh---hhcccccccCCCccccc
Q 001057 553 DDLNLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDL---N--VLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLT 624 (1170)
Q Consensus 553 ~~~~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~---~--~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~l 624 (1170)
.......|+|..+.+|||.++++|+|.+|.+.++... + .+..+.+|+.|||.+++ ||.+|+.|++++.+|.+
T Consensus 22 ~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~~~g~~fg~~~l~~~~~~~~~~~a~~~~~~~~~ 101 (214)
T COG0664 22 KLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFLGPGDFFGELALLGGDPRSASAVALTDVEVLEI 101 (214)
T ss_pred hceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEecCCchhhhHHHhcCCCccceEEEcceEEEEEe
Confidence 3455678999999999999999999999999999764 2 47789999999999999 79999999999999999
Q ss_pred CCchhhhhhhhhhhhhccC
Q 001057 625 PRTSQIELLVNGHRTITEL 643 (1170)
Q Consensus 625 dR~~~~~~~~~tfr~Il~~ 643 (1170)
+| ..|+.++..
T Consensus 102 ~~--------~~~~~~~~~ 112 (214)
T COG0664 102 PR--------KDFLELLAE 112 (214)
T ss_pred cH--------HHHHHHHhh
Confidence 99 888888877
No 457
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.39 E-value=2.2e-06 Score=99.50 Aligned_cols=231 Identities=18% Similarity=0.297 Sum_probs=148.1
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhc-CCCcEEE--------EEeeeeccc-c
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISV-RNPFVVR--------FFYSFTCRE-N 832 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL-~HPNIVr--------L~~~Fqd~~-~ 832 (1170)
.+.||+|+.+.+|-.-.- +. .+.|++.+...--.. .-+..|... .||-+-. |++ .+.. .
T Consensus 16 gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Pppa~~a------qk~a~la~~p~~p~~~~rvaWPqa~L~G--~~~~~~ 84 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RD-QVAKIYHAPPPAAQA------QKVAELAATPDAPLLNYRVAWPQATLHG--GRRGKV 84 (637)
T ss_pred CccccCCccceeeecchh--hc-hhheeecCCCchHHH------HHHHHhccCCCCcchhhhhcccHHHhhC--CCccce
Confidence 457999999999954321 22 345888765421111 122233332 4554332 121 1222 2
Q ss_pred eEEEEeeccCCC-hHHHH------HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 833 LYLVMEYLNGGD-LYSLL------RNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 833 LyLVMEY~~GGS-L~dlL------k~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
.-++|..+.|.. +..++ +....+.++.+....+.++.+...||..|.+-+|+.++|+|+++++.|.|.|=..-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 678888887652 22222 12234778888899999999999999999999999999999999999999984422
Q ss_pred cccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHh-----cCCCCcchhhhHHHHHHHH
Q 001057 906 KVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILL-----GMGHGATADWWSVGIILFE 980 (1170)
Q Consensus 906 k~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~-----g~~ys~ksDIWSLGVILYE 980 (1170)
.. ...+......+|.+.|.+||.-. +..-+...|-|.||+++|+
T Consensus 165 qi-------------------------------~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~ 213 (637)
T COG4248 165 QI-------------------------------NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFH 213 (637)
T ss_pred ee-------------------------------ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHH
Confidence 11 11122334568999999999865 3345667899999999999
Q ss_pred HHhC-CCCCCCCC-------HHHHHHHHhccC-----------CCCCC-CC-ccCCHHHHHHHHHhccC--CCCCCCChh
Q 001057 981 LLIG-IPPFNAKT-------PQQIFDNIMNRD-----------IPWPN-IP-EEMSVEACDLIDKLLTE--NPVQRLGAT 1037 (1170)
Q Consensus 981 LLTG-~pPF~g~~-------~~ei~qkIl~~~-----------l~fP~-ip-~~lS~eakDLIkkLLq~--DPskRpSa~ 1037 (1170)
+|.| +.||.|.. +-+ ..|..+. .+-|. .| .-+++.+..|..+|+.. ++.-||++.
T Consensus 214 lL~ggrHPysGI~~~~~ap~p~E--~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 214 LLFGGRHPYSGIPLISDAPNPLE--TDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred HHhcCCCCCCcccccCCCCCcch--hhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 9986 99997632 111 1222111 11111 11 24788999999999984 355899943
No 458
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.34 E-value=6.6e-08 Score=116.03 Aligned_cols=243 Identities=21% Similarity=0.187 Sum_probs=165.0
Q ss_pred CeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeecccceEEEE
Q 001057 759 DFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPF-VVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 759 dYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPN-IVrL~~~Fqd~~~LyLVM 837 (1170)
-|.....+++|+++++++.+...+...+ .+++... ....-++++|.+++||| .+..++.++.++...++|
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~ 313 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPM 313 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccchhh
Confidence 3666677899999999999877666555 6655432 34456889999999999 777788888888999999
Q ss_pred eeccCC-ChHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEEecCCccccccccCCC
Q 001057 838 EYLNGG-DLYSLL-RNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDD 915 (1170)
Q Consensus 838 EY~~GG-SL~dlL-k~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLsDFGLAk~~~~~~~~d 915 (1170)
+|+.++ +-.... ...-.|.+.+.....+.-+.+|+|||+.-=+||| |||... +..++.||+.+....
T Consensus 314 ~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~------ 382 (829)
T KOG0576|consen 314 RICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLT------ 382 (829)
T ss_pred hhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccC------
Confidence 999877 221111 1111234444555666778899999998778999 887754 788999999765320
Q ss_pred CCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHhCCCCCCCCCHHH
Q 001057 916 LSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLIGIPPFNAKTPQQ 995 (1170)
Q Consensus 916 ~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLTG~pPF~g~~~~e 995 (1170)
. ....++..+|+.++|||+.....+....|.|++|+--.+|.-|-+|-.... .
T Consensus 383 ------------------------~-~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~ 435 (829)
T KOG0576|consen 383 ------------------------R-TMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--A 435 (829)
T ss_pred ------------------------c-ccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCc--c
Confidence 0 113457789999999999999999999999999998888888888764411 1
Q ss_pred HHHHHhccCCCCCCCC-ccCCHH-HHHHHHHhccCCCCCCCChhhHHHHHcCCCCCCC
Q 001057 996 IFDNIMNRDIPWPNIP-EEMSVE-ACDLIDKLLTENPVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 996 i~qkIl~~~l~fP~ip-~~lS~e-akDLIkkLLq~DPskRpSa~~AeEILqHPfF~~i 1051 (1170)
..-.+-++.-.+.... ...++. -.++...||..-|..|+. +..++.|.+|++-
T Consensus 436 ~~~~~g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv---~mgacfsKvfngC 490 (829)
T KOG0576|consen 436 VLPMIGNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKV---HMGACFSKVFNGC 490 (829)
T ss_pred ccCCCCCCCCccccchhhhcCcccccCCcccccCCCCCCCcc---hhhHHHHHHhccC
Confidence 1111111110000000 001111 124777899999998888 5566888888764
No 459
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.34 E-value=1.6e-06 Score=96.67 Aligned_cols=137 Identities=23% Similarity=0.250 Sum_probs=99.7
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccc-------ccc------------HHHHHHHHHHHHHHHhcCCC--
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKAD-------MIR------------KNAVESILAERNILISVRNP-- 818 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~-------i~~------------~~~ve~~l~EieILskL~HP-- 818 (1170)
+.+...||-|--|.||.|.+. .|..+|||.=+-.. ..+ .-......+|.++|..|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456678999999999999985 78999999632110 000 01233567899999888754
Q ss_pred cEEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEE
Q 001057 819 FVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 819 NIVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VK 898 (1170)
.|.+.++ .+.-.+||||+.|-.|...- +..+.+..++..|+.-+.-+-..||||+|+.+-|||++.+|.+.
T Consensus 172 ~VP~P~~----~nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~ 242 (304)
T COG0478 172 KVPKPIA----WNRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIV 242 (304)
T ss_pred CCCCccc----cccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEE
Confidence 5555543 24557999999987766532 13444555666677777766699999999999999999999999
Q ss_pred EEecCCcc
Q 001057 899 LTDFGLSK 906 (1170)
Q Consensus 899 LsDFGLAk 906 (1170)
++||--+.
T Consensus 243 vIDwPQ~v 250 (304)
T COG0478 243 VIDWPQAV 250 (304)
T ss_pred EEeCcccc
Confidence 99998665
No 460
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=98.21 E-value=8.8e-07 Score=112.14 Aligned_cols=102 Identities=9% Similarity=0.032 Sum_probs=91.1
Q ss_pred CCCcccccccccCCCCCcceeecCCcEEEEEc--C--ccccccCCCCCchHhhhh---hhcccccccCCCcccccCCchh
Q 001057 557 LMSPKQNSLSRQGSKEMLDHVPDDDNAFVIED--L--NVLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTPRTSQ 629 (1170)
Q Consensus 557 ~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~--~--~~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ldR~~~ 629 (1170)
...|+|..|++|||.++.+|+|.+|.|+++.. + ..+..+.+|+.|||.+++ ||.+||.|.+.|.||.|+|
T Consensus 400 ~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~~~~e~~l~~l~~Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~--- 476 (823)
T PLN03192 400 EYIPPREDVIMQNEAPDDVYIVVSGEVEIIDSEGEKERVVGTLGCGDIFGEVGALCCRPQSFTFRTKTLSQLLRLKT--- 476 (823)
T ss_pred eeeCCCCEEEECCCCCceEEEEEecEEEEEEecCCcceeeEEccCCCEecchHHhcCCCCCCeEEEcccEEEEEEEH---
Confidence 45889999999999999999999999999863 2 347899999999999998 9999999999999999999
Q ss_pred hhhhhhhhhhhccCCCHHHHHHHHHHhhccccCCCCC
Q 001057 630 IELLVNGHRTITELQNPQQIKKLLDVSRSIASVNDCD 666 (1170)
Q Consensus 630 ~~~~~~tfr~Il~~~~~~kr~~y~~fl~~V~~l~~l~ 666 (1170)
..|..++.....-.+.++..+++...-++++.
T Consensus 477 -----~~f~~ll~~~p~d~~~i~~~~l~~~~~l~~l~ 508 (823)
T PLN03192 477 -----STLIEAMQTRQEDNVVILKNFLQHHKELHDLN 508 (823)
T ss_pred -----HHHHHHHHHhhHHHHHHHHHHHHHhhhhcccc
Confidence 99999999888888888999988877666654
No 461
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.19 E-value=2e-05 Score=86.02 Aligned_cols=141 Identities=23% Similarity=0.341 Sum_probs=91.2
Q ss_pred CCCCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHH------HHHHHHHHHhcCC---CcEEEEEe
Q 001057 755 TSIEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVES------ILAERNILISVRN---PFVVRFFY 825 (1170)
Q Consensus 755 i~iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~------~l~EieILskL~H---PNIVrL~~ 825 (1170)
+...+|.+++++-......|.+.. ..|+.+.+|..+............ ..+++..+..+.. -....++.
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIe--i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIE--IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEE--ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 445679999999888888787765 457889999876533222222221 1223333333321 22222222
Q ss_pred e-----eecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEEEE
Q 001057 826 S-----FTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLT 900 (1170)
Q Consensus 826 ~-----Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VKLs 900 (1170)
+ +.-....+|||||++|..|.++.. ++++ +...|+.+|.-||+.|++|+|+.|.|++++.++ ++++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iI 176 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRII 176 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEE
Confidence 1 222244578999999988776532 3332 445677889999999999999999999998554 9999
Q ss_pred ecCCcc
Q 001057 901 DFGLSK 906 (1170)
Q Consensus 901 DFGLAk 906 (1170)
||+..+
T Consensus 177 D~~~k~ 182 (229)
T PF06176_consen 177 DTQGKR 182 (229)
T ss_pred ECcccc
Confidence 998765
No 462
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.11 E-value=6e-05 Score=78.26 Aligned_cols=138 Identities=28% Similarity=0.390 Sum_probs=81.9
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEeeeec---ccceEEEE
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNP--FVVRFFYSFTC---RENLYLVM 837 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HP--NIVrL~~~Fqd---~~~LyLVM 837 (1170)
++.|+.|..+.||++.... ..+++|+.... .....+..|..++..+... .+.+++..... ....+++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~ 74 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLM 74 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH-----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEE
Confidence 5789999999999998754 48899986543 3455677888888777532 34556553322 23478999
Q ss_pred eeccCCChHH----------------HHH---hc----CCCCHHH------HHHH---------------HHHHHH-HHH
Q 001057 838 EYLNGGDLYS----------------LLR---NL----GCLDEDM------ARVY---------------IAELVL-ALE 872 (1170)
Q Consensus 838 EY~~GGSL~d----------------lLk---~~----~~LSEe~------ar~I---------------aaQIL~-ALe 872 (1170)
++++|..+.. .+. .. ..+.... .... ...+.. .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999987777 111 11 0111100 0000 111222 333
Q ss_pred HHHh-------CCeeeccCCCCcEEeC-CCCcEEEEecCCccc
Q 001057 873 YLHS-------LNVIHRDLKPDNLLIG-QDGHIKLTDFGLSKV 907 (1170)
Q Consensus 873 YLHs-------~GIIHRDIKPENILLd-~dG~VKLsDFGLAk~ 907 (1170)
.+++ ..++|+|+.|.|||++ .++.+.|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 3332 3599999999999999 667778999998864
No 463
>PRK09902 hypothetical protein; Provisional
Probab=98.09 E-value=2.4e-05 Score=85.00 Aligned_cols=139 Identities=14% Similarity=0.186 Sum_probs=99.4
Q ss_pred ccCCCeEEEEeeecCCCCEEEEEEeeccc---cccHHHHHHHHHHHHHHHhcCCCc--EEEEEeeeec----ccceEEEE
Q 001057 767 SQGAFGRVFLARKRATGDLFAIKVLKKAD---MIRKNAVESILAERNILISVRNPF--VVRFFYSFTC----RENLYLVM 837 (1170)
Q Consensus 767 G~GgFGtVyLArdk~TGe~VAIKvLkKs~---i~~~~~ve~~l~EieILskL~HPN--IVrL~~~Fqd----~~~LyLVM 837 (1170)
|+||-+-|+..... |+.|-+|.-.... .........+.+|...|..+..-+ +.+....-.. .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 56888889976543 4467788643111 000224467899999998886422 3344321111 12368999
Q ss_pred eeccC-CChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCc--EEEEecCCccc
Q 001057 838 EYLNG-GDLYSLLRNL--GCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGH--IKLTDFGLSKV 907 (1170)
Q Consensus 838 EY~~G-GSL~dlLk~~--~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~--VKLsDFGLAk~ 907 (1170)
|-+.| -+|.+++... .+.++.....++.++..+|.-||+.|+.|+|+-+.|||++.+|. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98754 5888888663 34577777889999999999999999999999999999987777 99999997764
No 464
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.09 E-value=2.5e-05 Score=86.40 Aligned_cols=138 Identities=22% Similarity=0.220 Sum_probs=94.6
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHH---------------------HHHHHHHHHHHHHhcCC--Cc
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKN---------------------AVESILAERNILISVRN--PF 819 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~---------------------~ve~~l~EieILskL~H--PN 819 (1170)
...|+.|--+.||+|.. .++..||+|+++........ .......|..-|.++.. -.
T Consensus 53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34788999999999975 56889999998754322221 11234556666766542 23
Q ss_pred EEEEEeeeecccceEEEEeeccCC-ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCcEEeCCCCcE
Q 001057 820 VVRFFYSFTCRENLYLVMEYLNGG-DLYSLLRNLGCLDEDMARVYIAELVLALEYLHS-LNVIHRDLKPDNLLIGQDGHI 897 (1170)
Q Consensus 820 IVrL~~~Fqd~~~LyLVMEY~~GG-SL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs-~GIIHRDIKPENILLd~dG~V 897 (1170)
+.+-+.++ .-.|||||+... .-.-.|+.- .+..+.+..+..+++..+.-|-. .|+||+||..-|||+. ++.+
T Consensus 132 vP~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv-~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p 205 (268)
T COG1718 132 VPEPIAFR----NNVLVMEFIGDDGLPAPRLKDV-PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEP 205 (268)
T ss_pred CCCceeec----CCeEEEEeccCCCCCCCCcccC-CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeE
Confidence 33334333 236899999543 111112221 23444678888899999998877 8999999999999998 8899
Q ss_pred EEEecCCccc
Q 001057 898 KLTDFGLSKV 907 (1170)
Q Consensus 898 KLsDFGLAk~ 907 (1170)
.++|||-|..
T Consensus 206 ~iID~~QaV~ 215 (268)
T COG1718 206 YIIDVSQAVT 215 (268)
T ss_pred EEEECccccc
Confidence 9999998874
No 465
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=98.04 E-value=2.7e-06 Score=77.97 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=70.9
Q ss_pred CCCcccccccccCCCCCcceeecCCcEEEEEcC-----ccccccCCCCCchHhhhh---hhcccccccCCCcccccCCch
Q 001057 557 LMSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDL-----NVLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTPRTS 628 (1170)
Q Consensus 557 ~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~-----~~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ldR~~ 628 (1170)
...++|..+..+|+..+++|+|.+|.+.++... ..+..+.+|+.||+.+++ ++..++.|.++|.+|.+++
T Consensus 20 ~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~-- 97 (115)
T cd00038 20 RRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFLGPGDLFGELALLGNGPRSATVRALTDSELLVLPR-- 97 (115)
T ss_pred eeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEecCCccCcChHHHhcCCCCCceEEEcCceEEEEEeH--
Confidence 457899999999999999999999999998765 457889999999998886 8899999999999999999
Q ss_pred hhhhhhhhhhhhccCCC
Q 001057 629 QIELLVNGHRTITELQN 645 (1170)
Q Consensus 629 ~~~~~~~tfr~Il~~~~ 645 (1170)
+.|..++....
T Consensus 98 ------~~~~~~~~~~~ 108 (115)
T cd00038 98 ------SDFRRLLQEYP 108 (115)
T ss_pred ------HHHHHHHHHCc
Confidence 77777765543
No 466
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.02 E-value=2.5e-05 Score=99.56 Aligned_cols=205 Identities=23% Similarity=0.276 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEEeeeeccc----ceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001057 801 AVESILAERNILISVRNPFVVRFFYSFTCRE----NLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHS 876 (1170)
Q Consensus 801 ~ve~~l~EieILskL~HPNIVrL~~~Fqd~~----~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs 876 (1170)
.+.....|...+.++.|+|++.++.+..... .+.+..+||.+-++...+...+.++.+.++.+..++++||.|+|+
T Consensus 225 ~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 225 EIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHH
Confidence 3444556777788899999999987765433 234556899999999999999999999999999999999999999
Q ss_pred CCeeeccCCCC---cEEeCCCCcEEEE--ecCCccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCC
Q 001057 877 LNVIHRDLKPD---NLLIGQDGHIKLT--DFGLSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGT 951 (1170)
Q Consensus 877 ~GIIHRDIKPE---NILLd~dG~VKLs--DFGLAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGT 951 (1170)
....|.-+.-. +...+..+.+..+ ||+..+... ......+..-.
T Consensus 305 ~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~-------------------------------d~~~~~~~~~~ 353 (1351)
T KOG1035|consen 305 LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLP-------------------------------DNEKSFSDLLA 353 (1351)
T ss_pred hccceeEEecccccccccCccceeecchhhhcccccCC-------------------------------CcccchhhcCc
Confidence 85555444333 3333445556555 777665321 00111122345
Q ss_pred CCCCchHHHhcCCCCcc--hhhhHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCCCccCCHHHHHHHHHhccCC
Q 001057 952 PDYLAPEILLGMGHGAT--ADWWSVGIILFELLIGIPPFNAKTPQQIFDNIMNRDIPWPNIPEEMSVEACDLIDKLLTEN 1029 (1170)
Q Consensus 952 p~YmAPEVL~g~~ys~k--sDIWSLGVILYELLTG~pPF~g~~~~ei~qkIl~~~l~fP~ip~~lS~eakDLIkkLLq~D 1029 (1170)
..+.|||......+..+ .|+|.+|..+..+..|..+-.-. .....+ ++.....+..+++.+|+.-+
T Consensus 354 ~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~~~~~~i~~~~---~~~~~~---------l~~~~~~~~~d~~~~~~~~~ 421 (1351)
T KOG1035|consen 354 EIRNADEDLKENTAKKSRLTDLWCLGLLLLQLSQGEDISEKS---AVPVSL---------LDVLSTSELLDALPKCLDED 421 (1351)
T ss_pred cccccccccccccchhhhhhHHHHHHHHHhhhhhcCcccccc---cchhhh---------hccccchhhhhhhhhhcchh
Confidence 56788888877666555 69999999999998875442110 000111 11122226788999999999
Q ss_pred CCCCCChhhHHHHHcCCCCCCC
Q 001057 1030 PVQRLGATGAREVKQHPFFKNI 1051 (1170)
Q Consensus 1030 PskRpSa~~AeEILqHPfF~~i 1051 (1170)
+++|++ +.+++.|+|.+.-
T Consensus 422 ~~~Rl~---~~~ll~~~f~~~~ 440 (1351)
T KOG1035|consen 422 SEERLS---ALELLTHPFLRFP 440 (1351)
T ss_pred hhhccc---hhhhhhchhcccc
Confidence 999999 8899999998643
No 467
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.99 E-value=5.7e-05 Score=82.09 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=82.6
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc--EEEEEeeeecccceEEEEeecc
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPF--VVRFFYSFTCRENLYLVMEYLN 841 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPN--IVrL~~~Fqd~~~LyLVMEY~~ 841 (1170)
..||.|..+.||+. .|..+++|...... ....+.+|.+++..+..-. +.+.+++..+.+.+.+|||++.
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-----~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~ 77 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-----DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIV 77 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC-----CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecC
Confidence 57899999999974 24457789876422 2234678999998876433 4566666667777889999998
Q ss_pred CCC-hH--------------HHH----HhcCCC-----CH-HHHHHHHH----------HHHH-HHHHHHh----CCeee
Q 001057 842 GGD-LY--------------SLL----RNLGCL-----DE-DMARVYIA----------ELVL-ALEYLHS----LNVIH 881 (1170)
Q Consensus 842 GGS-L~--------------dlL----k~~~~L-----SE-e~ar~Iaa----------QIL~-ALeYLHs----~GIIH 881 (1170)
|.+ +. ..+ .+...+ .. .....+.. .+.. ...+|.. ..++|
T Consensus 78 G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 78 GKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred CccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 864 11 111 000111 10 00011100 1111 1222321 24789
Q ss_pred ccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 882 RDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 882 RDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
+|+.|.||+++.++ +.++||+.|..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999888 99999998864
No 468
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.93 E-value=4.5e-05 Score=92.28 Aligned_cols=138 Identities=23% Similarity=0.354 Sum_probs=87.5
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccc--------------------------c-HHHH----H------HHH
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMI--------------------------R-KNAV----E------SIL 806 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~--------------------------~-~~~v----e------~~l 806 (1170)
..|+.++-|+||.|+.+ +|+.||||+.+..-.. + ...+ + .+.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 56999999999999975 5999999987542100 0 0001 1 233
Q ss_pred HHHHHHHhcC-----CCcE--EEEEeeeecccceEEEEeeccCCChHHHH--HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001057 807 AERNILISVR-----NPFV--VRFFYSFTCRENLYLVMEYLNGGDLYSLL--RNLGCLDEDMARVYIAELVLALEYLHSL 877 (1170)
Q Consensus 807 ~EieILskL~-----HPNI--VrL~~~Fqd~~~LyLVMEY~~GGSL~dlL--k~~~~LSEe~ar~IaaQIL~ALeYLHs~ 877 (1170)
+|..-+.++. .|+| .++|. +-...-.|+|||+.|-.+.+.. +. ..++...+.....++ -+.-+=..
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~w--e~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~--f~~q~~~d 284 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYW--EYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRA--FLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeeh--hccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHH--HHHHHHhc
Confidence 4444444432 3433 33432 2234457999999998888874 44 334432222211111 12223358
Q ss_pred CeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 878 NVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 878 GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
|++|.|.+|.||+++.+|.+.+.|||+...
T Consensus 285 gffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 285 GFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred CccccCCCccceEEecCCcEEEEcCcceec
Confidence 999999999999999999999999998764
No 469
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.89 E-value=0.0001 Score=79.50 Aligned_cols=134 Identities=17% Similarity=0.132 Sum_probs=81.4
Q ss_pred eccCCC-eEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecccceEEEEeeccCC
Q 001057 766 ISQGAF-GRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFVVRFFYSFTCRENLYLVMEYLNGG 843 (1170)
Q Consensus 766 LG~GgF-GtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNIVrL~~~Fqd~~~LyLVMEY~~GG 843 (1170)
|-.|.. ..||++... +..+.+|+..... ...+.+|+.++..+. +--+.+++++....+..++|||+++|.
T Consensus 6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~ 77 (244)
T cd05150 6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGV 77 (244)
T ss_pred cCCCCCcCeEEEEcCC--CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCc
Confidence 444555 789988653 4678888765432 234567888887774 334567777776666789999999987
Q ss_pred ChHHHH----------------HhcCCCCH-------H------HHHHHHH----------------HHHHHHHHHH---
Q 001057 844 DLYSLL----------------RNLGCLDE-------D------MARVYIA----------------ELVLALEYLH--- 875 (1170)
Q Consensus 844 SL~dlL----------------k~~~~LSE-------e------~ar~Iaa----------------QIL~ALeYLH--- 875 (1170)
+|.... .+...++. . .....+. .+...+..|-
T Consensus 78 ~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 157 (244)
T cd05150 78 PAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATR 157 (244)
T ss_pred cHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhC
Confidence 765331 11111110 0 0000000 0111122221
Q ss_pred ----hCCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 876 ----SLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 876 ----s~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
...++|+|+.|.|||++.++.+.|+||+.|..
T Consensus 158 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 158 PAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred CCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 22489999999999999887789999998864
No 470
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=97.85 E-value=9.3e-06 Score=87.32 Aligned_cols=84 Identities=7% Similarity=-0.018 Sum_probs=73.1
Q ss_pred cccCCCcccccccccCCCCCcceeecCCcEEEEE---cCc--cccccCCCCCchHhhhh---hhcccccccCCCcccccC
Q 001057 554 DLNLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIE---DLN--VLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTP 625 (1170)
Q Consensus 554 ~~~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~---~~~--~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ld 625 (1170)
......+||..+.+|||..+++|+|.+|.|.++. +|+ .+..+.+|+.||+.+++ |+.++|.|.+++.+|.++
T Consensus 31 ~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~~~g~~~G~~~~~~~~~~~~~~~A~~~~~i~~i~ 110 (226)
T PRK10402 31 TELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFFAAPCFIGEIELIDKDHETKAVQAIEECWCLALP 110 (226)
T ss_pred hhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeecCCCCeEEeehhhcCCCCCccEEEeccEEEEEEE
Confidence 3455789999999999999999999999999986 564 47789999999999987 999999999999999999
Q ss_pred CchhhhhhhhhhhhhccCCC
Q 001057 626 RTSQIELLVNGHRTITELQN 645 (1170)
Q Consensus 626 R~~~~~~~~~tfr~Il~~~~ 645 (1170)
+ ..|+.++..+.
T Consensus 111 ~--------~~~~~ll~~~p 122 (226)
T PRK10402 111 M--------KDCRPLLLNDA 122 (226)
T ss_pred H--------HHHHHHHhcCH
Confidence 9 78877775543
No 471
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.85 E-value=0.00032 Score=75.88 Aligned_cols=128 Identities=23% Similarity=0.346 Sum_probs=89.6
Q ss_pred CCeEEEEEeccCCC-eEEEEeeecCCCCEEEEEEeeccc----------cccH--------HHHHHHHHHHHHHHhcC--
Q 001057 758 EDFEIIKPISQGAF-GRVFLARKRATGDLFAIKVLKKAD----------MIRK--------NAVESILAERNILISVR-- 816 (1170)
Q Consensus 758 edYevlk~LG~GgF-GtVyLArdk~TGe~VAIKvLkKs~----------i~~~--------~~ve~~l~EieILskL~-- 816 (1170)
.+++.++.||.|.. |.||+++. .|+.||||++..-. .... ....-|..|-....+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 78999999999999 99999975 58899999933210 0000 12234566666655554
Q ss_pred -CCcE--EEEEeeeecc------------------cceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001057 817 -NPFV--VRFFYSFTCR------------------ENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLH 875 (1170)
Q Consensus 817 -HPNI--VrL~~~Fqd~------------------~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLH 875 (1170)
+.++ |+.|+++.-. ....||.||++... .++. .-+.+|+.-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~~----~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQI----RDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccch----hHHHHHHHHHHHHH
Confidence 4556 8888887322 12467888886543 1222 23557888889999
Q ss_pred hCCeeeccCCCCcEEeCCCCcEEEEecCCc
Q 001057 876 SLNVIHRDLKPDNLLIGQDGHIKLTDFGLS 905 (1170)
Q Consensus 876 s~GIIHRDIKPENILLd~dG~VKLsDFGLA 905 (1170)
..||+-+|+++.|.. + -+|+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred HCCeeeccCcccccc---C--CEEEecccC
Confidence 999999999999987 3 389999964
No 472
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=97.82 E-value=1.4e-05 Score=85.88 Aligned_cols=83 Identities=17% Similarity=0.013 Sum_probs=71.9
Q ss_pred cCCCcccccccccCCCCCcceeecCCcEEEEEc--C--ccccccCCCCCchHhhhh---hhcccccccCCCcccccCCch
Q 001057 556 NLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIED--L--NVLPEISCDKNPTAADIA---AKTSSAGSLTPRSPLLTPRTS 628 (1170)
Q Consensus 556 ~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~--~--~~v~~~~~g~sFGELAL~---pRAATv~A~t~~~lw~ldR~~ 628 (1170)
-...+||..|.+|||..+++|+|-+|.+.++.. | ..+..+.+|+.||+.+++ |+.++|.|.++|.+|.+++
T Consensus 32 ~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~~~~~~i~~~~~g~~~g~~~~~~~~~~~~~~~A~~~~~~~~i~~-- 109 (236)
T PRK09392 32 LQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQDRETTLAILRPVSTFILAAVVLDAPYLMSARTLTRSRVLMIPA-- 109 (236)
T ss_pred eeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCCCceEEEEEeCCCchhhhHHHhCCCCCceEEEEcCceEEEEEeH--
Confidence 356789999999999999999999999999852 2 347788999999999987 9999999999999999999
Q ss_pred hhhhhhhhhhhhccCCCH
Q 001057 629 QIELLVNGHRTITELQNP 646 (1170)
Q Consensus 629 ~~~~~~~tfr~Il~~~~~ 646 (1170)
..|+.++..+..
T Consensus 110 ------~~~~~l~~~~p~ 121 (236)
T PRK09392 110 ------ELVREAMSEDPG 121 (236)
T ss_pred ------HHHHHHHHHCHH
Confidence 888887765443
No 473
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=97.81 E-value=1.1e-05 Score=84.61 Aligned_cols=80 Identities=10% Similarity=0.019 Sum_probs=69.6
Q ss_pred cCCCcccccccccCCCCCcceeecCCcEEEEE---cCc--cccccCCCCCchHhhhh----hhcccccccCCCcccccCC
Q 001057 556 NLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIE---DLN--VLPEISCDKNPTAADIA----AKTSSAGSLTPRSPLLTPR 626 (1170)
Q Consensus 556 ~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~---~~~--~v~~~~~g~sFGELAL~----pRAATv~A~t~~~lw~ldR 626 (1170)
....+||..+.+||+..+++|+|.+|.+.++. +|+ .+..+.+|+.||+.+++ +.++++.|.++|.+|.+++
T Consensus 22 ~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~a~~~~~v~~i~~ 101 (211)
T PRK11753 22 IHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISY 101 (211)
T ss_pred EEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEcCCCCEEeehhhccCCCCceEEEEEcCcEEEEEEcH
Confidence 45789999999999999999999999999885 344 46689999999999887 5678999999999999999
Q ss_pred chhhhhhhhhhhhhccC
Q 001057 627 TSQIELLVNGHRTITEL 643 (1170)
Q Consensus 627 ~~~~~~~~~tfr~Il~~ 643 (1170)
..|..+++.
T Consensus 102 --------~~~~~l~~~ 110 (211)
T PRK11753 102 --------KKFRQLIQV 110 (211)
T ss_pred --------HHHHHHHHH
Confidence 788877664
No 474
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.77 E-value=5.6e-06 Score=106.61 Aligned_cols=253 Identities=19% Similarity=0.110 Sum_probs=166.9
Q ss_pred CCCeEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccc--cHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc--cc
Q 001057 757 IEDFEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMI--RKNAVESILAERNILISVRNPFVVRFFYSFTCR--EN 832 (1170)
Q Consensus 757 iedYevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~--~~~~ve~~l~EieILskL~HPNIVrL~~~Fqd~--~~ 832 (1170)
..+|++.--+|-|.+++--.-+.+.. .+.+|+.+..... .+-..+....|++-++...|++++..+.-.... ..
T Consensus 1228 ~e~~EV~l~i~~~~~~R~k~Lr~kid--~Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~e 1305 (2724)
T KOG1826|consen 1228 MEHSEVNLGISNHFHFRNKWLRSKID--WFKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTE 1305 (2724)
T ss_pred hhhhheeeecccceeeccchHhhhhc--eeEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChH
Confidence 45566666666665554322222211 2455665443221 122345566777777788999998877555443 34
Q ss_pred eEEEEeeccCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC-C----eeeccCCCCcEEeCCCCcEEEEecC
Q 001057 833 LYLVMEYLNGGDLYSLLRNL----GCLDEDMARVYIAELVLALEYLHSL-N----VIHRDLKPDNLLIGQDGHIKLTDFG 903 (1170)
Q Consensus 833 LyLVMEY~~GGSL~dlLk~~----~~LSEe~ar~IaaQIL~ALeYLHs~-G----IIHRDIKPENILLd~dG~VKLsDFG 903 (1170)
.|.+|+|+.+|.++..|.+. ..+....+.....+.+.+..-+|+. | .+|++||+-|.+|..+..+|+.++|
T Consensus 1306 e~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~g 1385 (2724)
T KOG1826|consen 1306 EYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGG 1385 (2724)
T ss_pred HHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccc
Confidence 78999999999999999654 2344444444444548888888854 2 6899999999999999999999999
Q ss_pred CccccccccCCCCCCCCCCCCCccccccccCCCCCcccccccccccCCCCCCchHHHhcCCCCcchhhhHHHHHHHHHHh
Q 001057 904 LSKVGLIHSTDDLSAPSLGSGGFLVNDELKDQPPLTREQRQKHSVAGTPDYLAPEILLGMGHGATADWWSVGIILFELLI 983 (1170)
Q Consensus 904 LAk~~~~~~~~d~~a~sl~s~~~l~~~~l~~~~~lt~~~~~~~s~vGTp~YmAPEVL~g~~ys~ksDIWSLGVILYELLT 983 (1170)
+.+... .........++++.|++|++.....++.+.|+|..|+-+|+.--
T Consensus 1386 LdKIkn------------------------------p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~ 1435 (2724)
T KOG1826|consen 1386 LDKIKN------------------------------PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD 1435 (2724)
T ss_pred cccccC------------------------------chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc
Confidence 998310 11122345678999999999998889888999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHhccCC---CCCCCCccCCHHHHHHHHHhccCCCCCCCChhhHHHHHcCCCCC
Q 001057 984 GIPPFNAKTPQQIFDNIMNRDI---PWPNIPEEMSVEACDLIDKLLTENPVQRLGATGAREVKQHPFFK 1049 (1170)
Q Consensus 984 G~pPF~g~~~~ei~qkIl~~~l---~fP~ip~~lS~eakDLIkkLLq~DPskRpSa~~AeEILqHPfF~ 1049 (1170)
|..+|.. ..+.++.+.+ .+..++.-.|.++-.....+|-..-..||+ ....+.-+.|.
T Consensus 1436 ~n~~fi~-----flq~~Lkgiidn~tf~sIe~l~pgdaNve~~~~Ll~K~~~rp~---q~isls~d~~a 1496 (2724)
T KOG1826|consen 1436 GNAYFIF-----FLQPALKGIIDNHTFFSIEKLKPGDANVEALHRLLWKYMERPG---QYISLSRDHFA 1496 (2724)
T ss_pred ccHHHHH-----HHHHHHcCcccccccccccccCCCcccHHHHHHHHHHhhhcch---hhhhccccccc
Confidence 9888743 2333333222 122233333455555666666667778887 44556666554
No 475
>PLN02876 acyl-CoA dehydrogenase
Probab=97.71 E-value=0.00035 Score=89.03 Aligned_cols=145 Identities=19% Similarity=0.374 Sum_probs=89.9
Q ss_pred EEEEeccCCCeEEEEeeecCCC--CEEEEEEeeccccccHHHHHHHHHHHHHHHhcC-CCcE--EEEEeeeecc---cce
Q 001057 762 IIKPISQGAFGRVFLARKRATG--DLFAIKVLKKADMIRKNAVESILAERNILISVR-NPFV--VRFFYSFTCR---ENL 833 (1170)
Q Consensus 762 vlk~LG~GgFGtVyLArdk~TG--e~VAIKvLkKs~i~~~~~ve~~l~EieILskL~-HPNI--VrL~~~Fqd~---~~L 833 (1170)
.++.|+.|.+..+|+......+ ..+++|+........ ....+.+|..+|..+. |++| .+++.++.+. +..
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~--~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~ 119 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ--SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTA 119 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc--cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCc
Confidence 3577899999999998765432 357777654322111 1245778999999985 6654 7777776654 467
Q ss_pred EEEEeeccCCChHH--------------------HHHhcCCCC----------------HHHHHHHHHH-----------
Q 001057 834 YLVMEYLNGGDLYS--------------------LLRNLGCLD----------------EDMARVYIAE----------- 866 (1170)
Q Consensus 834 yLVMEY~~GGSL~d--------------------lLk~~~~LS----------------Ee~ar~IaaQ----------- 866 (1170)
|+||||++|..+.+ .|.....++ ..++..+..+
T Consensus 120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~ 199 (822)
T PLN02876 120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP 199 (822)
T ss_pred eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence 89999998754321 111110110 1122221111
Q ss_pred ----HHHHHHHHHh-----------CCeeeccCCCCcEEeCCC-Cc-EEEEecCCcccc
Q 001057 867 ----LVLALEYLHS-----------LNVIHRDLKPDNLLIGQD-GH-IKLTDFGLSKVG 908 (1170)
Q Consensus 867 ----IL~ALeYLHs-----------~GIIHRDIKPENILLd~d-G~-VKLsDFGLAk~~ 908 (1170)
+...+.+|.. ..+||+|+++.|||++.+ +. +-|.||++|...
T Consensus 200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 2233556632 249999999999999853 33 579999998753
No 476
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=97.70 E-value=2.1e-05 Score=72.25 Aligned_cols=81 Identities=12% Similarity=-0.016 Sum_probs=68.5
Q ss_pred CCCcccccccccCCCCCcceeecCCcEEEEEc---C--ccccccCCCCCchHhhhh-----hhcccccccCCCcccccCC
Q 001057 557 LMSPKQNSLSRQGSKEMLDHVPDDDNAFVIED---L--NVLPEISCDKNPTAADIA-----AKTSSAGSLTPRSPLLTPR 626 (1170)
Q Consensus 557 ~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~---~--~~v~~~~~g~sFGELAL~-----pRAATv~A~t~~~lw~ldR 626 (1170)
...++|..+.+||+.-+++|+|.+|.+.++.. | ..+..+++|+.||+..++ |...++.+.+++.+|.+++
T Consensus 20 ~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 99 (120)
T smart00100 20 VRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGILGPGDFFGELALLTNSRRAASATAVALELATLLRIDF 99 (120)
T ss_pred EEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEeecCCceechhhhccCCCcccceEEEEEeeEEEEccCH
Confidence 45689999999999999999999999999863 3 368899999999999876 7788889999999999999
Q ss_pred chhhhhhhhhhhhhccCCC
Q 001057 627 TSQIELLVNGHRTITELQN 645 (1170)
Q Consensus 627 ~~~~~~~~~tfr~Il~~~~ 645 (1170)
..|..++....
T Consensus 100 --------~~~~~~~~~~~ 110 (120)
T smart00100 100 --------RDFLQLLQENP 110 (120)
T ss_pred --------HHHHHHHHHhH
Confidence 66666654433
No 477
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=97.69 E-value=2.3e-05 Score=81.02 Aligned_cols=77 Identities=8% Similarity=-0.071 Sum_probs=66.0
Q ss_pred cccccccCCCCCcceeecCCcEEEEE---cCcc--ccccCCCCCchHhhhh-----hhcccccccCCCcccccCCchhhh
Q 001057 562 QNSLSRQGSKEMLDHVPDDDNAFVIE---DLNV--LPEISCDKNPTAADIA-----AKTSSAGSLTPRSPLLTPRTSQIE 631 (1170)
Q Consensus 562 ~~~~~~QGd~Gd~fYVie~G~~~v~~---~~~~--v~~~~~g~sFGELAL~-----pRAATv~A~t~~~lw~ldR~~~~~ 631 (1170)
|..+.+|||..+++|+|.+|.|.++. +|+. +..+++|+.||+.+++ ++.+++.|.++|.+|.+++
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~----- 75 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALLRENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPI----- 75 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEccCCCEeeeeeeccCCCCccceEEEEecceEEEEeeH-----
Confidence 57889999999999999999999886 5654 6789999999999888 3567889999999999999
Q ss_pred hhhhhhhhhccCCCH
Q 001057 632 LLVNGHRTITELQNP 646 (1170)
Q Consensus 632 ~~~~tfr~Il~~~~~ 646 (1170)
..|+.++..+..
T Consensus 76 ---~~~~~l~~~~p~ 87 (193)
T TIGR03697 76 ---EQVEKAIEEDPD 87 (193)
T ss_pred ---HHHHHHHHHChH
Confidence 888888765443
No 478
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=97.60 E-value=3.8e-05 Score=80.27 Aligned_cols=74 Identities=8% Similarity=-0.121 Sum_probs=64.7
Q ss_pred ccccCCCcccccccccCC--CCCcceeecCCcEEEEE---cCc--cccccCCCCCchHhhhh--hhcccccccCCCcccc
Q 001057 553 DDLNLMSPKQNSLSRQGS--KEMLDHVPDDDNAFVIE---DLN--VLPEISCDKNPTAADIA--AKTSSAGSLTPRSPLL 623 (1170)
Q Consensus 553 ~~~~~~~~k~~~~~~QGd--~Gd~fYVie~G~~~v~~---~~~--~v~~~~~g~sFGELAL~--pRAATv~A~t~~~lw~ 623 (1170)
..+-..++||..+.+||| ..+.+|+|-+|.|.++. ||+ .+.-+.+|+.||+.++. |+.+++.|.+++.+|.
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~~~Gd~~G~~~~~~~~~~~~~~A~~~~~v~~ 84 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYVRPGEYFGEEALAGAERAYFAEAVTDSRIDV 84 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEecCCCeechHHhcCCCCCceEEEcCceEEEE
Confidence 445567899999999999 67999999999999986 465 46677999999997765 8999999999999999
Q ss_pred cCC
Q 001057 624 TPR 626 (1170)
Q Consensus 624 ldR 626 (1170)
+++
T Consensus 85 i~~ 87 (202)
T PRK13918 85 LNP 87 (202)
T ss_pred EEH
Confidence 998
No 479
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.58 E-value=3.2e-05 Score=96.04 Aligned_cols=71 Identities=10% Similarity=-0.115 Sum_probs=65.1
Q ss_pred cCCCcccccccccCCCCCcceeecCCcEEEEEcC----ccccccCCCCCch-Hh---hh-hhhcccccccCCCcccccCC
Q 001057 556 NLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIEDL----NVLPEISCDKNPT-AA---DI-AAKTSSAGSLTPRSPLLTPR 626 (1170)
Q Consensus 556 ~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~~----~~v~~~~~g~sFG-EL---AL-~pRAATv~A~t~~~lw~ldR 626 (1170)
.--+|+|++|+||||..+.+|+|-.|.+++...+ ..+..+++|+.|| || |+ +|.++||+|.|.|.+.+|.+
T Consensus 444 ~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVralt~~el~~L~~ 523 (727)
T KOG0498|consen 444 PEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDGGGFFVVAILGPGDFFGEELLTWCLDLPQTRTVRALTYCELFRLSA 523 (727)
T ss_pred hhccCCCCeEEecCCccceeEEEEeeeEEEEEccCCceEEEEEecCCCccchHHHHHHhcCCCCceeehhhhhhHHhccH
Confidence 3457899999999999999999999999999877 7899999999999 65 44 48899999999999999999
No 480
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.57 E-value=0.0011 Score=71.48 Aligned_cols=133 Identities=22% Similarity=0.255 Sum_probs=91.3
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeecccc-------------ccHHHHHHHHHHHHHHHhcC------CCcEEEEE
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADM-------------IRKNAVESILAERNILISVR------NPFVVRFF 824 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i-------------~~~~~ve~~l~EieILskL~------HPNIVrL~ 824 (1170)
..||+|+.=.|| .++.+ ....||++..... ..........+|+.-...+. +.+|.++|
T Consensus 7 ~~i~~G~~R~cy--~HP~d-p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCY--QHPDD-PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEE--ECCCC-CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 469999999999 44433 3356898876540 00112344555555544444 78999999
Q ss_pred eeeecccceEEEEeeccC------CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCC---
Q 001057 825 YSFTCRENLYLVMEYLNG------GDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDG--- 895 (1170)
Q Consensus 825 ~~Fqd~~~LyLVMEY~~G------GSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG--- 895 (1170)
++.+++..+-+|+|.+.. .+|.+++.+. .+++ .. ...+-.-..||-+++|+.+||+|.||++...+
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~ 158 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGE 158 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEecCCCc
Confidence 999999999999998743 3788888653 4665 32 33334456688899999999999999996432
Q ss_pred -cEEEEe-cCC
Q 001057 896 -HIKLTD-FGL 904 (1170)
Q Consensus 896 -~VKLsD-FGL 904 (1170)
.+.|+| ||-
T Consensus 159 ~~lvlIDG~G~ 169 (199)
T PF10707_consen 159 FRLVLIDGLGE 169 (199)
T ss_pred eEEEEEeCCCC
Confidence 577777 443
No 481
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.54 E-value=0.00046 Score=74.47 Aligned_cols=74 Identities=16% Similarity=0.140 Sum_probs=45.2
Q ss_pred EEEeccCCCe-EEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC---cEEEEEeeeecc---cceEE
Q 001057 763 IKPISQGAFG-RVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNP---FVVRFFYSFTCR---ENLYL 835 (1170)
Q Consensus 763 lk~LG~GgFG-tVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HP---NIVrL~~~Fqd~---~~LyL 835 (1170)
+..|+.||.. .||... ..+.+|+.... .....+.+|..+|..+... -+.++++..... ...|+
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~-----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~ 71 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAA-----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS 71 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCcc-----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence 3567777776 499752 24667865432 1234678899998877531 234444433332 23588
Q ss_pred EEeeccCCChH
Q 001057 836 VMEYLNGGDLY 846 (1170)
Q Consensus 836 VMEY~~GGSL~ 846 (1170)
||++++|.++.
T Consensus 72 l~~~i~G~~l~ 82 (235)
T cd05155 72 VYRWLEGETAT 82 (235)
T ss_pred EEEeecCCCCC
Confidence 99999987663
No 482
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.47 E-value=0.00057 Score=83.04 Aligned_cols=137 Identities=23% Similarity=0.361 Sum_probs=85.6
Q ss_pred EEeccCCCeEEEEeeecCCCCEEEEEEeeccccccH-----------------------------HHHH------HHHHH
Q 001057 764 KPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRK-----------------------------NAVE------SILAE 808 (1170)
Q Consensus 764 k~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~-----------------------------~~ve------~~l~E 808 (1170)
+.||.-+.|.|+.|+.+. |+.||+|+-+.. +... +..+ .+.+|
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~-l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPG-LEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcC-hHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 468999999999999875 999999986532 1110 0001 22333
Q ss_pred HHHHHh----cCCCc------EEEEEeeeecccceEEEEeeccCCChHHH--HHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001057 809 RNILIS----VRNPF------VVRFFYSFTCRENLYLVMEYLNGGDLYSL--LRNLGCLDEDMARVYIAELVLALEYLHS 876 (1170)
Q Consensus 809 ieILsk----L~HPN------IVrL~~~Fqd~~~LyLVMEY~~GGSL~dl--Lk~~~~LSEe~ar~IaaQIL~ALeYLHs 876 (1170)
.+-..+ +.|-+ |.++|..+. ..-.|+||||.|..+.++ |.+. .++...+...+.+.. ++-|=.
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~-gi~~~~i~~~l~~~~--~~qIf~ 319 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKR-GISPHDILNKLVEAY--LEQIFK 319 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHc-CCCHHHHHHHHHHHH--HHHHHh
Confidence 333222 23434 555553332 345799999999876654 4443 355543333222221 112235
Q ss_pred CCeeeccCCCCcEEeCC----CCcEEEEecCCccc
Q 001057 877 LNVIHRDLKPDNLLIGQ----DGHIKLTDFGLSKV 907 (1170)
Q Consensus 877 ~GIIHRDIKPENILLd~----dG~VKLsDFGLAk~ 907 (1170)
.|++|.|=+|.||+++. ++.+.+-|||+...
T Consensus 320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred cCCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 68999999999999984 56899999999875
No 483
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=97.46 E-value=8.6e-05 Score=80.34 Aligned_cols=83 Identities=7% Similarity=-0.079 Sum_probs=70.6
Q ss_pred ccCCCcccccccccCCCCCcceeecCCcEEEEE---cCc--cccccCCCCCchHhhhhhhcccccccCCCcccccCCchh
Q 001057 555 LNLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIE---DLN--VLPEISCDKNPTAADIAAKTSSAGSLTPRSPLLTPRTSQ 629 (1170)
Q Consensus 555 ~~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~---~~~--~v~~~~~g~sFGELAL~pRAATv~A~t~~~lw~ldR~~~ 629 (1170)
....++||..+.+|||..+++|+|.+|.|.++. +|+ .+.-+.+|+.||+.+..|+..++.|++++.+|.+++
T Consensus 39 ~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~~~Gd~fG~~~~~~~~~~~~A~~ds~v~~i~~--- 115 (230)
T PRK09391 39 SEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFHLPGDVFGLESGSTHRFTAEAIVDTTVRLIKR--- 115 (230)
T ss_pred eeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEecCCceecccCCCcCCeEEEEcCceEEEEEEH---
Confidence 446789999999999999999999999999986 565 355678999999876668899999999999999999
Q ss_pred hhhhhhhhhhhccCCC
Q 001057 630 IELLVNGHRTITELQN 645 (1170)
Q Consensus 630 ~~~~~~tfr~Il~~~~ 645 (1170)
..|+.++..+.
T Consensus 116 -----~~f~~l~~~~p 126 (230)
T PRK09391 116 -----RSLEQAAATDV 126 (230)
T ss_pred -----HHHHHHHhhCh
Confidence 77777766543
No 484
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.35 E-value=0.00079 Score=71.77 Aligned_cols=130 Identities=22% Similarity=0.315 Sum_probs=90.8
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcEE-EEEeeeecccceEEEEe
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVV-RFFYSFTCRENLYLVME 838 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNIV-rL~~~Fqd~~~LyLVME 838 (1170)
-++.+.||+|.+|.||+|.+. |..+|+|+-+.. .-...+..|.++|..+.--++- ++|.+..+ ++.||
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~d-----s~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me 92 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRRD-----SPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRME 92 (201)
T ss_pred hhhhhhhhcccccEEEEeecc--CceEEEEEecCC-----cchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhh
Confidence 356678999999999999864 678999985543 2335678899999998876663 45544332 45699
Q ss_pred eccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC-CCcEEeCCCCcEEEEecCCccc
Q 001057 839 YLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLK-PDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 839 Y~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIK-PENILLd~dG~VKLsDFGLAk~ 907 (1170)
|+.|-.|...-... +.. -+..++.+---|-..||-|..|. |..++|-.++.+.|+||..|+.
T Consensus 93 ~i~G~~L~~~~~~~---~rk----~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 93 YIDGRPLGKLEIGG---DRK----HLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhcCcchhhhhhcc---cHH----HHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 99998887755421 222 22345555444667899999886 5555555566999999999874
No 485
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.23 E-value=0.002 Score=68.88 Aligned_cols=137 Identities=18% Similarity=0.241 Sum_probs=80.0
Q ss_pred EEEeccCCCeEEEEeeecC-CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC-CcEEEEEeeeecccceEEEEeec
Q 001057 763 IKPISQGAFGRVFLARKRA-TGDLFAIKVLKKADMIRKNAVESILAERNILISVRN-PFVVRFFYSFTCRENLYLVMEYL 840 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~-TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H-PNIVrL~~~Fqd~~~LyLVMEY~ 840 (1170)
++.|..|-...||++.... .++.|.+|+...... ......+|..++..+.. ...+++++.+.. .+||||+
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~----~~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e~i 74 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE----LIIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYEFI 74 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc----ceecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEEee
Confidence 4678888888999987543 356788997654211 11123468888887753 234455544332 3799999
Q ss_pred cCCChHHH--------------HHhc---C-CCC-----------HHHHHHHHHH----------------------HH-
Q 001057 841 NGGDLYSL--------------LRNL---G-CLD-----------EDMARVYIAE----------------------LV- 868 (1170)
Q Consensus 841 ~GGSL~dl--------------Lk~~---~-~LS-----------Ee~ar~IaaQ----------------------IL- 868 (1170)
+|.++... +.+. . ... .+.+..+... +.
T Consensus 75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 154 (235)
T cd05157 75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRD 154 (235)
T ss_pred CCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHH
Confidence 98765211 1110 0 110 1121122111 11
Q ss_pred --HHHH-HHH----hCCeeeccCCCCcEEeCC-CCcEEEEecCCccc
Q 001057 869 --LALE-YLH----SLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKV 907 (1170)
Q Consensus 869 --~ALe-YLH----s~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~ 907 (1170)
..|. .+- ..+++|+|+.+.|||++. ++.+.|+||..|..
T Consensus 155 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 155 EISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 1111 111 235899999999999997 57899999998874
No 486
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.08 E-value=0.0017 Score=69.06 Aligned_cols=98 Identities=24% Similarity=0.277 Sum_probs=78.5
Q ss_pred HHHHHHHHhcCC-CcEEEEEeeeecccceEEEEeeccCCChHHH---HHhcCCCCHHHHHHHHHHHHHHHHHHHh---CC
Q 001057 806 LAERNILISVRN-PFVVRFFYSFTCRENLYLVMEYLNGGDLYSL---LRNLGCLDEDMARVYIAELVLALEYLHS---LN 878 (1170)
Q Consensus 806 l~EieILskL~H-PNIVrL~~~Fqd~~~LyLVMEY~~GGSL~dl---Lk~~~~LSEe~ar~IaaQIL~ALeYLHs---~G 878 (1170)
..|.-+|..+.+ +++++++|++-. ++|.||...+++... +...-..++.....++.+++..+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 457888888886 699999998843 568999987766421 2222346888999999999999999997 34
Q ss_pred eeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 879 VIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 879 IIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
+.-.|++|+|+-++.+|++|++|...+..
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV 111 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcch
Confidence 77799999999999999999999987654
No 487
>PRK10593 hypothetical protein; Provisional
Probab=96.92 E-value=0.0095 Score=67.47 Aligned_cols=78 Identities=13% Similarity=0.058 Sum_probs=53.9
Q ss_pred EEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCC---CcEEEEEeeeec---ccceE
Q 001057 761 EIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRN---PFVVRFFYSFTC---RENLY 834 (1170)
Q Consensus 761 evlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~H---PNIVrL~~~Fqd---~~~Ly 834 (1170)
.-.+.||.|..+.||..... ++ .+.+|..+.. .....+..|...|+.+.- ..+.++++++.+ .+..+
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~-----~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~ 89 (297)
T PRK10593 17 SRVECISEQPYAALWALYDS-QG-NPMPLMARSF-----STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDV 89 (297)
T ss_pred heeeecCCccceeEEEEEcC-CC-CEEEEEeccc-----ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeE
Confidence 34567999999999987542 23 4667774321 112467889999988753 356777766644 35689
Q ss_pred EEEeeccCCCh
Q 001057 835 LVMEYLNGGDL 845 (1170)
Q Consensus 835 LVMEY~~GGSL 845 (1170)
||||+++|+++
T Consensus 90 LVmE~i~G~~~ 100 (297)
T PRK10593 90 LLLERLRGVSV 100 (297)
T ss_pred EEEeccCCEec
Confidence 99999998765
No 488
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.86 E-value=0.015 Score=68.96 Aligned_cols=80 Identities=18% Similarity=0.142 Sum_probs=53.6
Q ss_pred EEEeccCCCeEEEEeeecCCCCEEEEEEeecccc-c-c--HHHHHHHHHHHHHHHhcC---CCcEEEEEeeeecccceEE
Q 001057 763 IKPISQGAFGRVFLARKRATGDLFAIKVLKKADM-I-R--KNAVESILAERNILISVR---NPFVVRFFYSFTCRENLYL 835 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i-~-~--~~~ve~~l~EieILskL~---HPNIVrL~~~Fqd~~~LyL 835 (1170)
.+.||.|.+..||.+.....++.|.||.-..... . . .-..++...|.+.|..+. -.++++++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 4679999999999999864445899997431100 0 0 123456677888887753 2457777755 4466789
Q ss_pred EEeeccCCC
Q 001057 836 VMEYLNGGD 844 (1170)
Q Consensus 836 VMEY~~GGS 844 (1170)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999997643
No 489
>PLN02868 acyl-CoA thioesterase family protein
Probab=96.86 E-value=0.00054 Score=80.73 Aligned_cols=71 Identities=10% Similarity=-0.090 Sum_probs=62.8
Q ss_pred ccCCCcccccccccCCCCCcceeecCCcEEEEEc---C-ccccccCCCCCchHhhhh--hhcccccccCCCcccccCC
Q 001057 555 LNLMSPKQNSLSRQGSKEMLDHVPDDDNAFVIED---L-NVLPEISCDKNPTAADIA--AKTSSAGSLTPRSPLLTPR 626 (1170)
Q Consensus 555 ~~~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~~---~-~~v~~~~~g~sFGELAL~--pRAATv~A~t~~~lw~ldR 626 (1170)
.-...+||..|+++||..+.+|+|-+|.|.++.. | ..+..+++|+.||+. +. ++.+++.|.+++.+|.+++
T Consensus 32 ~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~ge~~l~~l~~Gd~fG~~-l~~~~~~~~~~A~~d~~v~~ip~ 108 (413)
T PLN02868 32 VPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEESRPEFLLKRYDYFGYG-LSGSVHSADVVAVSELTCLVLPH 108 (413)
T ss_pred eEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCCcEEEEEeCCCCEeehh-hCCCCcccEEEECCCEEEEEEcH
Confidence 3467899999999999999999999999999873 3 346778999999985 44 9999999999999999999
No 490
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=96.82 E-value=0.0008 Score=72.31 Aligned_cols=77 Identities=10% Similarity=-0.092 Sum_probs=63.4
Q ss_pred CCcccccccccCCCCCcceeecCCcEEEEE---cCcc--ccccCCCCCchHhhhh--hhcccccccCCCcccccCCchhh
Q 001057 558 MSPKQNSLSRQGSKEMLDHVPDDDNAFVIE---DLNV--LPEISCDKNPTAADIA--AKTSSAGSLTPRSPLLTPRTSQI 630 (1170)
Q Consensus 558 ~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~---~~~~--v~~~~~g~sFGELAL~--pRAATv~A~t~~~lw~ldR~~~~ 630 (1170)
..+||..+.++||..+++|+|.+|.+.++. ||+. +.-+.+|+-||+.++. +..+++.|.+++.++.+++
T Consensus 41 ~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~~~gd~~g~~~~~~~~~~~~~~a~~~~~i~~ip~---- 116 (235)
T PRK11161 41 PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGQHPSFAQALETSMVCEIPF---- 116 (235)
T ss_pred eecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEeccCCceeccccccCCCCcceEEEeccEEEEEEEH----
Confidence 578999999999999999999999999986 3543 5567899999986665 4445789999999999999
Q ss_pred hhhhhhhhhhcc
Q 001057 631 ELLVNGHRTITE 642 (1170)
Q Consensus 631 ~~~~~tfr~Il~ 642 (1170)
..|+.++.
T Consensus 117 ----~~f~~l~~ 124 (235)
T PRK11161 117 ----ETLDDLSG 124 (235)
T ss_pred ----HHHHHHHH
Confidence 66666554
No 491
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.82 E-value=0.0065 Score=67.78 Aligned_cols=76 Identities=12% Similarity=0.101 Sum_probs=47.0
Q ss_pred EEEeccCCCeEEEEeeecC------CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCc-EEEEEeeeecccceEE
Q 001057 763 IKPISQGAFGRVFLARKRA------TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPF-VVRFFYSFTCRENLYL 835 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~------TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPN-IVrL~~~Fqd~~~LyL 835 (1170)
++.|..|-...||++.... +++.|++|+..... .......+|..++..+...+ ..++++.+.. .+
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~----~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~ 74 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV----ELLIDRERELVVFARLSERNLGPKLYGIFPN----GR 74 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC----cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cc
Confidence 3456667777888886533 35789999866532 11234567888887775322 3455555542 35
Q ss_pred EEeeccCCChH
Q 001057 836 VMEYLNGGDLY 846 (1170)
Q Consensus 836 VMEY~~GGSL~ 846 (1170)
||||++|..+.
T Consensus 75 v~e~i~G~~l~ 85 (302)
T cd05156 75 IEEFIPSRTLT 85 (302)
T ss_pred hhheeCCCcCC
Confidence 89999887653
No 492
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.68 E-value=0.0097 Score=65.03 Aligned_cols=132 Identities=20% Similarity=0.225 Sum_probs=74.9
Q ss_pred eccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE-EEEEeeeecccceEEEEeeccCCC
Q 001057 766 ISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFV-VRFFYSFTCRENLYLVMEYLNGGD 844 (1170)
Q Consensus 766 LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNI-VrL~~~Fqd~~~LyLVMEY~~GGS 844 (1170)
+..|-.+.+|+.. .+++.|++|+....... ..-...+|..++..+....+ .++++.+. -++||||++|..
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~---~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~ 74 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKA---LGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEV 74 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCccccc---ccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcc
Confidence 4567777889876 45667888875432110 00123568888887764322 33443332 268999999866
Q ss_pred hHH--------------HHHhcC-------CCCH-HHHHHHHHHH---------HHHHHHHHh--------CCeeeccCC
Q 001057 845 LYS--------------LLRNLG-------CLDE-DMARVYIAEL---------VLALEYLHS--------LNVIHRDLK 885 (1170)
Q Consensus 845 L~d--------------lLk~~~-------~LSE-e~ar~IaaQI---------L~ALeYLHs--------~GIIHRDIK 885 (1170)
+.. .+.+.. .++. ..+..+..++ ...+..+-. ..++|+|+.
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~ 154 (256)
T TIGR02721 75 ITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVH 154 (256)
T ss_pred cccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCC
Confidence 531 111111 1111 1222222121 111222211 248999999
Q ss_pred CCcEEeCCCCcEEEEecCCccc
Q 001057 886 PDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 886 PENILLd~dG~VKLsDFGLAk~ 907 (1170)
|.|||++.++ +.|+||+.|..
T Consensus 155 ~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 155 AYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCcEEEeCCC-CEEEeccccCc
Confidence 9999999877 78999999874
No 493
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.67 E-value=0.017 Score=64.11 Aligned_cols=138 Identities=20% Similarity=0.163 Sum_probs=81.8
Q ss_pred EEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEee------eecccce
Q 001057 762 IIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNP--FVVRFFYS------FTCRENL 833 (1170)
Q Consensus 762 vlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HP--NIVrL~~~------Fqd~~~L 833 (1170)
-++.|..|....+|++.. .+..+++|+.... ....+..|+.++..+.+. .+.+++.. ....+..
T Consensus 18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~~------~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~ 89 (296)
T cd05153 18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEKV------SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP 89 (296)
T ss_pred heecccCccccceEEEEe--CCCcEEEEEcCCC------ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence 356787888889998864 3446889987541 123455677777766432 24444321 1234567
Q ss_pred EEEEeeccCCChHH----HH----------Hhc-CCCCH--------HHHH------------HHHHHHHHHHHHHHh--
Q 001057 834 YLVMEYLNGGDLYS----LL----------RNL-GCLDE--------DMAR------------VYIAELVLALEYLHS-- 876 (1170)
Q Consensus 834 yLVMEY~~GGSL~d----lL----------k~~-~~LSE--------e~ar------------~IaaQIL~ALeYLHs-- 876 (1170)
++||+|++|..+.. .+ +.. ..+.. .... .....+..++.++-+
T Consensus 90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~ 169 (296)
T cd05153 90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD 169 (296)
T ss_pred EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence 89999998876421 11 100 00100 0000 011122334445443
Q ss_pred -----CCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 877 -----LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 877 -----~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
.+++|+|+.|.|||++.++.+.|+||+.|..
T Consensus 170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 4699999999999999877779999998864
No 494
>PRK05231 homoserine kinase; Provisional
Probab=96.57 E-value=0.034 Score=62.60 Aligned_cols=31 Identities=35% Similarity=0.379 Sum_probs=26.6
Q ss_pred CCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 877 LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 877 ~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
.++||+|+.|.|||++.+...-|+||+.|..
T Consensus 187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 3799999999999998665568999999864
No 495
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.52 E-value=0.03 Score=63.11 Aligned_cols=141 Identities=23% Similarity=0.244 Sum_probs=81.3
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCC--cEEEEEee------eeccc
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNP--FVVRFFYS------FTCRE 831 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HP--NIVrL~~~------Fqd~~ 831 (1170)
...++.++.|....||++.. .+| .+.+|+..... ....+..|..++..|... .+.+++.. ....+
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-----~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g 96 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-----KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAG 96 (307)
T ss_pred ceeccccCCccccceEEEEe-CCC-cEEEEEecCCC-----CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCC
Confidence 44567788888889998864 344 57789765421 122344566666666421 13343321 11235
Q ss_pred ceEEEEeeccCCChH-----------HHH---Hhc-CCCC--------HHH-----HH----------HHHHHHHHHHHH
Q 001057 832 NLYLVMEYLNGGDLY-----------SLL---RNL-GCLD--------EDM-----AR----------VYIAELVLALEY 873 (1170)
Q Consensus 832 ~LyLVMEY~~GGSL~-----------dlL---k~~-~~LS--------Ee~-----ar----------~IaaQIL~ALeY 873 (1170)
..++||+|++|..+. ..+ +.. ..++ ... .. .....+...+++
T Consensus 97 ~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 176 (307)
T TIGR00938 97 KPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDY 176 (307)
T ss_pred eEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHH
Confidence 678999999885431 111 110 0110 000 00 001123345555
Q ss_pred HHh-------CCeeeccCCCCcEEeCCCCcEEEEecCCccc
Q 001057 874 LHS-------LNVIHRDLKPDNLLIGQDGHIKLTDFGLSKV 907 (1170)
Q Consensus 874 LHs-------~GIIHRDIKPENILLd~dG~VKLsDFGLAk~ 907 (1170)
+.. .+++|+|+++.||+++.++.+.|+||+.+..
T Consensus 177 l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 177 LDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 542 5799999999999999888778999998864
No 496
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.46 E-value=0.019 Score=67.26 Aligned_cols=141 Identities=27% Similarity=0.260 Sum_probs=92.2
Q ss_pred EEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccHH-----------------------HHHHHHHHHHHHHhcCCC
Q 001057 762 IIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRKN-----------------------AVESILAERNILISVRNP 818 (1170)
Q Consensus 762 vlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~~-----------------------~ve~~l~EieILskL~HP 818 (1170)
+-.+|..|--+.||.|.. .+|..+|||+++.+-+.-.. ..-....|..-|.+++..
T Consensus 148 inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 148 INGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred cccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 345788999999999985 57888999998753221110 111234466667666543
Q ss_pred cEEEEEeeeecccceEEEEeeccCCChHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCCCcEEeCCCCc
Q 001057 819 FVVRFFYSFTCRENLYLVMEYLNGGDLYSL-LRNLGCLDEDMARVYIAELVLALEYLH-SLNVIHRDLKPDNLLIGQDGH 896 (1170)
Q Consensus 819 NIVrL~~~Fqd~~~LyLVMEY~~GGSL~dl-Lk~~~~LSEe~ar~IaaQIL~ALeYLH-s~GIIHRDIKPENILLd~dG~ 896 (1170)
.|.--- ...- ..-.|||+|+. .+=+-. .-+.-.++...++.+-.|++.-+.-|. ..++||.||.--|+|+ .+|.
T Consensus 227 GIP~Pe-PIlL-k~hVLVM~FlG-rdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~ 302 (520)
T KOG2270|consen 227 GIPCPE-PILL-KNHVLVMEFLG-RDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGK 302 (520)
T ss_pred CCCCCC-ceee-ecceEeeeecc-CCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCE
Confidence 322100 0000 12368999995 332211 112235777788888888888887765 5699999999999999 6889
Q ss_pred EEEEecCCccc
Q 001057 897 IKLTDFGLSKV 907 (1170)
Q Consensus 897 VKLsDFGLAk~ 907 (1170)
+.++|-+-+..
T Consensus 303 lyiIDVSQSVE 313 (520)
T KOG2270|consen 303 LYIIDVSQSVE 313 (520)
T ss_pred EEEEEcccccc
Confidence 99999987653
No 497
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.33 E-value=0.0037 Score=71.96 Aligned_cols=136 Identities=16% Similarity=0.190 Sum_probs=93.5
Q ss_pred eEEEEEeccCCCeEEEEeeecCCCCEEEEEEeeccccccH-------------------HHHHHHHHHHHHHHhcC-CCc
Q 001057 760 FEIIKPISQGAFGRVFLARKRATGDLFAIKVLKKADMIRK-------------------NAVESILAERNILISVR-NPF 819 (1170)
Q Consensus 760 Yevlk~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~i~~~-------------------~~ve~~l~EieILskL~-HPN 819 (1170)
|.+...||-|--+-||++-+ ..|.++++|+=+-....-. -..-...+|...|+.|. |-+
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 67788999999999999987 4688899985321110000 01123456777777775 332
Q ss_pred -EEEEEeeeecccceEEEEeeccCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCcEEeCCCCcEE
Q 001057 820 -VVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEDMARVYIAELVLALEYLHSLNVIHRDLKPDNLLIGQDGHIK 898 (1170)
Q Consensus 820 -IVrL~~~Fqd~~~LyLVMEY~~GGSL~dlLk~~~~LSEe~ar~IaaQIL~ALeYLHs~GIIHRDIKPENILLd~dG~VK 898 (1170)
|.+.+ +.+.-|+|||++.|-.|...-+-. .+..+...++.-|--|-.+|+||+|..--||+++.++.++
T Consensus 173 pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v~------d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~ 242 (465)
T KOG2268|consen 173 PVPKPI----DHNRHCVVMELVDGYPLRQVRHVE------DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIV 242 (465)
T ss_pred CCCCcc----cccceeeHHHhhcccceeeeeecC------ChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEE
Confidence 22222 234568999999998877654321 1233445566667778999999999999999999999999
Q ss_pred EEecCCcc
Q 001057 899 LTDFGLSK 906 (1170)
Q Consensus 899 LsDFGLAk 906 (1170)
++||--+.
T Consensus 243 vIDFPQmv 250 (465)
T KOG2268|consen 243 VIDFPQMV 250 (465)
T ss_pred EeechHhh
Confidence 99997654
No 498
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.15 E-value=0.0031 Score=75.92 Aligned_cols=70 Identities=9% Similarity=0.043 Sum_probs=62.9
Q ss_pred CCCcccccccccCCCCCcceeecCCcEEEEE--cC-ccccccCCCCCchHhhhh------hhcccccccCCCcccccCC
Q 001057 557 LMSPKQNSLSRQGSKEMLDHVPDDDNAFVIE--DL-NVLPEISCDKNPTAADIA------AKTSSAGSLTPRSPLLTPR 626 (1170)
Q Consensus 557 ~~~~k~~~~~~QGd~Gd~fYVie~G~~~v~~--~~-~~v~~~~~g~sFGELAL~------pRAATv~A~t~~~lw~ldR 626 (1170)
..+=.|..+-+-|+.|-.+|||..|.|.|+= +| +.+-|+..|+.|||+.|+ -|||.|+|..=+.|+.||.
T Consensus 553 V~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGGp~~~~Vl~tL~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~K 631 (815)
T KOG0499|consen 553 VLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGGPDGTKVLVTLKAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDK 631 (815)
T ss_pred eeecCCceeeecccccceeEEeecceEEEecCCCCCEEEEEecccceeeeeeeeeecCCCccchhhhhcccceeeEecH
Confidence 3455688999999999999999999999983 33 668899999999999998 8999999999999999999
No 499
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=95.90 E-value=0.047 Score=64.11 Aligned_cols=76 Identities=21% Similarity=0.176 Sum_probs=48.2
Q ss_pred EeccCCCeEEEEeeecCCCCEEEEEEeeccc-c---ccHHHHHHHHHHHHHHHhcC--CC-cEEEEEeeeecccceEEEE
Q 001057 765 PISQGAFGRVFLARKRATGDLFAIKVLKKAD-M---IRKNAVESILAERNILISVR--NP-FVVRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 765 ~LG~GgFGtVyLArdk~TGe~VAIKvLkKs~-i---~~~~~ve~~l~EieILskL~--HP-NIVrL~~~Fqd~~~LyLVM 837 (1170)
.||.|....||++.....++.|+||.-.... . .-.-..++...|...|.... .| .++++| +.+.....+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehH
Confidence 5899999999999976444678898532110 0 01223345567888886654 34 455565 34455667899
Q ss_pred eeccC
Q 001057 838 EYLNG 842 (1170)
Q Consensus 838 EY~~G 842 (1170)
|+++.
T Consensus 80 EdL~~ 84 (370)
T TIGR01767 80 EDLSH 84 (370)
T ss_pred hhCcc
Confidence 99954
No 500
>PLN02236 choline kinase
Probab=95.88 E-value=0.05 Score=62.97 Aligned_cols=137 Identities=17% Similarity=0.227 Sum_probs=78.2
Q ss_pred EEEeccCCCeEEEEeeecC----CCCEEEEEEeeccccccHHHHHHHHHHHHHHHhcCCCcE-EEEEeeeecccceEEEE
Q 001057 763 IKPISQGAFGRVFLARKRA----TGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFV-VRFFYSFTCRENLYLVM 837 (1170)
Q Consensus 763 lk~LG~GgFGtVyLArdk~----TGe~VAIKvLkKs~i~~~~~ve~~l~EieILskL~HPNI-VrL~~~Fqd~~~LyLVM 837 (1170)
++.|-.|-.-.+|++.... +++.|.+|+..... ...+. -.+|..++..+..-++ .++++.|... .|+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t---~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~ 112 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV---ELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG----RVE 112 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC---Ceeec-hHHHHHHHHHHHHcCCCCceEEEECCc----eEE
Confidence 3455558888899886432 34688999876532 11112 2467788777754333 3455555432 589
Q ss_pred eeccCCChHHH--------------HHhc---C----C-C-CHHHHHHHHHHH-----------------HHHHHHH---
Q 001057 838 EYLNGGDLYSL--------------LRNL---G----C-L-DEDMARVYIAEL-----------------VLALEYL--- 874 (1170)
Q Consensus 838 EY~~GGSL~dl--------------Lk~~---~----~-L-SEe~ar~IaaQI-----------------L~ALeYL--- 874 (1170)
+|++|.+|... +.+. . . + ..+.+..+..++ ...+..|
T Consensus 113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~ 192 (344)
T PLN02236 113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE 192 (344)
T ss_pred EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence 99987665311 1110 1 0 1 112232332221 1111111
Q ss_pred -H----hCCeeeccCCCCcEEeCC-CCcEEEEecCCccc
Q 001057 875 -H----SLNVIHRDLKPDNLLIGQ-DGHIKLTDFGLSKV 907 (1170)
Q Consensus 875 -H----s~GIIHRDIKPENILLd~-dG~VKLsDFGLAk~ 907 (1170)
. ...++|+|+++.|||++. ++.+.|+||..|..
T Consensus 193 ~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 193 LSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred hcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 1 225899999999999986 46899999999874
Done!