Query 001059
Match_columns 1170
No_of_seqs 730 out of 4314
Neff 7.3
Searched_HMMs 46136
Date Thu Mar 28 14:41:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001059.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001059hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1035 eIF-2alpha kinase GCN2 100.0 1.4E-89 3.1E-94 831.7 54.9 777 350-1159 474-1350(1351)
2 COG0124 HisS Histidyl-tRNA syn 100.0 3E-75 6.6E-80 673.1 38.7 407 714-1158 6-427 (429)
3 KOG1936 Histidyl-tRNA syntheta 100.0 7.6E-74 1.6E-78 627.9 36.0 427 712-1160 60-516 (518)
4 PLN02972 Histidyl-tRNA synthet 100.0 1.5E-71 3.2E-76 672.6 46.8 418 711-1160 326-761 (763)
5 PLN02530 histidine-tRNA ligase 100.0 2E-67 4.4E-72 632.6 42.0 404 713-1151 71-486 (487)
6 PRK12420 histidyl-tRNA synthet 100.0 7.1E-65 1.5E-69 603.6 40.9 402 713-1151 5-422 (423)
7 CHL00201 syh histidine-tRNA sy 100.0 3.7E-63 8.1E-68 588.1 40.4 402 713-1167 5-426 (430)
8 PRK12292 hisZ ATP phosphoribos 100.0 2.1E-60 4.6E-65 558.9 40.2 360 713-1117 4-378 (391)
9 PRK12421 ATP phosphoribosyltra 100.0 4.7E-58 1E-62 536.8 40.6 362 713-1126 8-384 (392)
10 TIGR00442 hisS histidyl-tRNA s 100.0 9.6E-57 2.1E-61 531.6 39.3 380 714-1141 2-397 (397)
11 PRK00037 hisS histidyl-tRNA sy 100.0 2.1E-56 4.5E-61 531.5 37.3 381 713-1159 5-411 (412)
12 TIGR00443 hisZ_biosyn_reg ATP 100.0 2.7E-52 5.8E-57 477.1 31.5 299 719-1052 1-312 (314)
13 PRK12295 hisZ ATP phosphoribos 100.0 1.1E-51 2.4E-56 477.9 33.1 305 727-1051 5-370 (373)
14 PF13393 tRNA-synt_His: Histid 100.0 2.5E-50 5.5E-55 461.9 27.7 297 717-1048 1-311 (311)
15 PRK12293 hisZ ATP phosphoribos 100.0 1.7E-48 3.7E-53 435.7 29.7 268 713-1052 6-279 (281)
16 KOG0615 Serine/threonine prote 100.0 2.6E-48 5.5E-53 428.5 18.4 261 353-669 170-446 (475)
17 COG3705 HisZ ATP phosphoribosy 100.0 2.9E-47 6.3E-52 431.7 24.7 368 713-1126 4-381 (390)
18 KOG0581 Mitogen-activated prot 100.0 4.7E-47 1E-51 417.3 21.5 259 350-668 74-343 (364)
19 KOG0575 Polo-like serine/threo 100.0 1.1E-46 2.4E-51 435.4 24.5 251 355-664 18-273 (592)
20 KOG0598 Ribosomal protein S6 k 100.0 2.3E-46 4.9E-51 412.0 21.8 261 353-671 23-292 (357)
21 cd00773 HisRS-like_core Class 100.0 4.3E-45 9.4E-50 407.7 28.1 249 725-1052 1-260 (261)
22 KOG0595 Serine/threonine-prote 100.0 1.9E-45 4.1E-50 407.1 22.1 259 352-667 7-275 (429)
23 KOG0592 3-phosphoinositide-dep 100.0 2.1E-45 4.5E-50 417.4 21.3 274 351-670 69-348 (604)
24 KOG0591 NIMA (never in mitosis 100.0 2.4E-46 5.2E-51 394.3 8.0 250 354-660 18-281 (375)
25 KOG0616 cAMP-dependent protein 100.0 5.7E-45 1.2E-49 387.4 18.4 257 353-671 42-308 (355)
26 KOG0605 NDR and related serine 100.0 1.9E-44 4.2E-49 410.5 22.6 278 353-673 139-458 (550)
27 KOG0593 Predicted protein kina 100.0 3.9E-45 8.4E-50 388.7 14.9 258 354-666 1-290 (396)
28 KOG0661 MAPK related serine/th 100.0 8.6E-45 1.9E-49 406.8 13.3 262 350-667 5-298 (538)
29 KOG0600 Cdc2-related protein k 100.0 1.4E-43 2.9E-48 399.9 19.7 266 349-666 111-406 (560)
30 KOG0582 Ste20-like serine/thre 100.0 1.8E-42 3.9E-47 385.5 24.2 264 353-668 24-301 (516)
31 KOG0659 Cdk activating kinase 100.0 7.3E-43 1.6E-47 366.5 19.3 258 355-667 2-288 (318)
32 KOG0597 Serine-threonine prote 100.0 2.7E-43 5.8E-48 398.7 16.9 254 354-666 1-257 (808)
33 KOG0583 Serine/threonine prote 100.0 3.7E-42 8E-47 399.9 25.4 256 352-665 14-280 (370)
34 KOG0694 Serine/threonine prote 100.0 2E-42 4.4E-47 403.8 23.0 287 351-698 364-660 (694)
35 KOG0588 Serine/threonine prote 100.0 2.7E-42 5.8E-47 398.8 20.1 256 353-667 10-270 (786)
36 KOG0663 Protein kinase PITSLRE 100.0 3.2E-42 7E-47 371.0 18.9 267 348-667 69-368 (419)
37 KOG0192 Tyrosine kinase specif 100.0 1E-41 2.2E-46 392.9 24.1 249 354-659 40-298 (362)
38 KOG0660 Mitogen-activated prot 100.0 3.9E-42 8.4E-47 377.1 19.3 275 356-690 23-328 (359)
39 TIGR00418 thrS threonyl-tRNA s 100.0 7E-41 1.5E-45 412.9 31.5 349 714-1157 188-561 (563)
40 KOG0585 Ca2+/calmodulin-depend 100.0 7.1E-42 1.5E-46 382.5 18.8 268 350-666 92-378 (576)
41 KOG0198 MEKK and related serin 100.0 1.2E-41 2.7E-46 381.3 19.6 261 355-668 17-284 (313)
42 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-43 6.8E-48 363.8 6.2 259 352-667 8-274 (355)
43 KOG0578 p21-activated serine/t 100.0 1.8E-41 3.9E-46 389.4 17.2 253 355-666 273-529 (550)
44 KOG0610 Putative serine/threon 100.0 5.6E-41 1.2E-45 371.3 19.1 279 353-673 75-405 (459)
45 KOG0611 Predicted serine/threo 100.0 3.8E-41 8.3E-46 367.7 16.7 252 353-664 51-307 (668)
46 PRK12294 hisZ ATP phosphoribos 100.0 6.2E-40 1.3E-44 362.7 26.3 255 725-1023 6-268 (272)
47 cd05612 STKc_PRKX_like Catalyt 100.0 5.2E-40 1.1E-44 372.7 23.4 254 355-670 1-264 (291)
48 PTZ00263 protein kinase A cata 100.0 5.8E-40 1.3E-44 379.2 23.8 259 351-671 14-282 (329)
49 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.8E-39 3.9E-44 367.7 26.3 254 354-663 4-288 (288)
50 KOG0599 Phosphorylase kinase g 100.0 5.1E-41 1.1E-45 351.8 12.2 260 352-667 14-290 (411)
51 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-39 4.3E-44 369.8 26.1 260 354-669 4-297 (303)
52 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.2E-39 4.7E-44 374.6 26.3 265 356-667 1-297 (338)
53 cd07848 STKc_CDKL5 Catalytic d 100.0 2.7E-39 5.9E-44 365.1 24.7 254 355-663 1-287 (287)
54 KOG0589 Serine/threonine prote 100.0 5.1E-40 1.1E-44 376.6 17.2 253 354-663 3-261 (426)
55 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-39 5.3E-44 373.0 23.0 251 361-670 1-261 (323)
56 KOG0594 Protein kinase PCTAIRE 100.0 1.9E-39 4.2E-44 357.5 21.0 265 354-667 10-309 (323)
57 PTZ00426 cAMP-dependent protei 100.0 4.5E-39 9.7E-44 373.6 24.7 258 351-670 26-294 (340)
58 KOG0201 Serine/threonine prote 100.0 4.4E-41 9.5E-46 374.9 7.2 253 355-667 13-270 (467)
59 PRK00413 thrS threonyl-tRNA sy 100.0 9.9E-40 2.1E-44 408.6 19.0 359 708-1161 252-634 (638)
60 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.3E-39 2E-43 369.6 25.7 258 355-671 1-268 (333)
61 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-38 2.4E-43 373.6 26.7 276 355-672 1-305 (363)
62 KOG0580 Serine/threonine prote 100.0 7.4E-40 1.6E-44 339.7 13.3 255 351-666 18-279 (281)
63 cd05626 STKc_LATS2 Catalytic d 100.0 2.2E-38 4.7E-43 373.6 26.9 273 356-669 2-314 (381)
64 cd05573 STKc_ROCK_NDR_like Cat 100.0 1E-38 2.3E-43 371.1 23.5 275 355-672 1-297 (350)
65 cd07862 STKc_CDK6 Catalytic do 100.0 2.8E-38 6E-43 357.4 26.2 257 355-663 1-290 (290)
66 KOG0612 Rho-associated, coiled 100.0 4.9E-40 1.1E-44 397.7 12.4 278 354-687 74-369 (1317)
67 cd05599 STKc_NDR_like Catalyti 100.0 2.1E-38 4.5E-43 371.1 25.8 275 355-671 1-307 (364)
68 cd05631 STKc_GRK4 Catalytic do 100.0 2.2E-38 4.7E-43 358.3 24.7 258 356-672 1-273 (285)
69 KOG0032 Ca2+/calmodulin-depend 100.0 2.1E-38 4.6E-43 368.4 24.9 258 351-666 31-299 (382)
70 cd05585 STKc_YPK1_like Catalyt 100.0 2.1E-38 4.5E-43 363.4 23.9 248 363-669 1-256 (312)
71 cd05629 STKc_NDR_like_fungal C 100.0 2.4E-38 5.2E-43 372.6 24.7 275 355-671 1-316 (377)
72 KOG0197 Tyrosine kinases [Sign 100.0 6.3E-39 1.4E-43 368.4 19.0 243 355-658 206-455 (468)
73 PTZ00036 glycogen synthase kin 100.0 3E-38 6.5E-43 379.0 25.2 258 355-666 66-357 (440)
74 cd05593 STKc_PKB_gamma Catalyt 100.0 3.2E-38 7E-43 364.6 24.1 251 361-670 1-261 (328)
75 cd05595 STKc_PKB_beta Catalyti 100.0 2.9E-38 6.3E-43 364.1 23.4 251 361-670 1-261 (323)
76 KOG0579 Ste20-like serine/thre 100.0 8.6E-40 1.9E-44 371.6 10.4 256 355-667 32-296 (1187)
77 cd07876 STKc_JNK2 Catalytic do 100.0 5.5E-38 1.2E-42 367.0 26.0 260 353-665 19-320 (359)
78 PHA03212 serine/threonine kina 100.0 4E-38 8.6E-43 372.3 24.9 252 352-666 89-382 (391)
79 cd05625 STKc_LATS1 Catalytic d 100.0 4.9E-38 1.1E-42 370.7 25.2 272 356-669 2-314 (382)
80 cd07853 STKc_NLK Catalytic dom 100.0 4.7E-38 1E-42 369.5 24.7 263 356-667 1-295 (372)
81 KOG0658 Glycogen synthase kina 100.0 6.5E-39 1.4E-43 352.3 15.7 255 356-667 25-313 (364)
82 PRK12305 thrS threonyl-tRNA sy 100.0 1.3E-37 2.8E-42 384.6 29.0 350 714-1161 194-571 (575)
83 cd05598 STKc_LATS Catalytic do 100.0 3.4E-38 7.4E-43 371.1 22.7 275 355-671 1-312 (376)
84 PRK12444 threonyl-tRNA synthet 100.0 1.2E-37 2.6E-42 388.0 28.6 352 713-1161 261-637 (639)
85 cd05601 STKc_CRIK Catalytic do 100.0 5.2E-38 1.1E-42 362.7 23.4 264 355-673 1-276 (330)
86 cd07863 STKc_CDK4 Catalytic do 100.0 1.4E-37 3E-42 351.1 26.2 256 356-663 1-288 (288)
87 cd06649 PKc_MEK2 Catalytic dom 100.0 1.8E-37 3.9E-42 358.7 27.2 254 354-667 4-308 (331)
88 cd05627 STKc_NDR2 Catalytic do 100.0 8.5E-38 1.8E-42 365.7 24.2 275 355-672 1-305 (360)
89 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-37 2.6E-42 359.0 24.9 257 356-671 1-268 (324)
90 cd07874 STKc_JNK3 Catalytic do 100.0 1.2E-37 2.5E-42 363.6 24.8 261 353-666 15-317 (355)
91 cd05590 STKc_nPKC_eta Catalyti 100.0 7.9E-38 1.7E-42 360.0 22.9 251 361-670 1-263 (320)
92 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.7E-37 3.7E-42 355.0 25.4 258 354-667 5-293 (309)
93 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-37 2.5E-42 366.0 24.4 263 354-671 42-315 (370)
94 cd07875 STKc_JNK1 Catalytic do 100.0 1.5E-37 3.3E-42 364.0 25.4 260 353-665 22-323 (364)
95 cd07878 STKc_p38beta_MAPK11 Ca 100.0 7.2E-38 1.6E-42 363.5 22.1 260 354-666 14-304 (343)
96 cd05614 STKc_MSK2_N N-terminal 100.0 2E-37 4.3E-42 358.2 25.2 259 356-671 1-278 (332)
97 cd05616 STKc_cPKC_beta Catalyt 100.0 1.9E-37 4.1E-42 357.2 24.7 257 356-671 1-268 (323)
98 cd05591 STKc_nPKC_epsilon Cata 100.0 1.4E-37 2.9E-42 358.1 23.4 252 361-671 1-265 (321)
99 cd05594 STKc_PKB_alpha Catalyt 100.0 7.5E-38 1.6E-42 360.9 21.2 251 361-670 1-262 (325)
100 PTZ00284 protein kinase; Provi 100.0 2.1E-37 4.6E-42 374.9 25.5 253 354-667 128-445 (467)
101 cd05589 STKc_PKN Catalytic dom 100.0 2.3E-37 5E-42 356.6 24.4 254 357-670 1-267 (324)
102 cd05621 STKc_ROCK2 Catalytic d 100.0 2.1E-37 4.6E-42 363.7 24.2 261 354-669 42-313 (370)
103 KOG0193 Serine/threonine prote 100.0 6.3E-38 1.4E-42 360.3 19.1 248 355-659 392-648 (678)
104 KOG4717 Serine/threonine prote 100.0 3.9E-38 8.4E-43 352.3 16.8 258 351-667 14-277 (864)
105 KOG0577 Serine/threonine prote 100.0 1.2E-38 2.6E-43 361.3 12.8 250 357-666 28-284 (948)
106 cd05584 STKc_p70S6K Catalytic 100.0 2.7E-37 5.8E-42 356.0 23.8 250 361-669 2-265 (323)
107 cd05592 STKc_nPKC_theta_delta 100.0 2.9E-37 6.2E-42 354.8 23.6 252 361-671 1-259 (316)
108 cd05597 STKc_DMPK_like Catalyt 100.0 5.2E-37 1.1E-41 354.9 25.9 264 355-672 1-278 (331)
109 cd05588 STKc_aPKC Catalytic do 100.0 3.6E-37 7.8E-42 356.0 24.3 252 361-671 1-273 (329)
110 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.4E-37 7.3E-42 357.1 24.1 251 355-660 7-330 (338)
111 cd05620 STKc_nPKC_delta Cataly 100.0 3.2E-37 6.9E-42 354.4 23.4 252 361-671 1-259 (316)
112 KOG0574 STE20-like serine/thre 100.0 8.8E-40 1.9E-44 345.6 2.0 250 355-667 33-290 (502)
113 cd05582 STKc_RSK_N N-terminal 100.0 1.3E-37 2.8E-42 357.6 20.0 251 361-670 2-264 (318)
114 cd07861 STKc_CDK1_euk Catalyti 100.0 7.8E-37 1.7E-41 344.2 25.6 253 356-663 1-285 (285)
115 KOG4721 Serine/threonine prote 100.0 2.1E-38 4.6E-43 358.2 12.3 237 356-661 125-365 (904)
116 cd05570 STKc_PKC Catalytic dom 100.0 4.1E-37 9E-42 353.7 23.4 251 361-670 1-262 (318)
117 cd05618 STKc_aPKC_iota Catalyt 100.0 5.2E-37 1.1E-41 354.7 24.2 252 361-671 1-273 (329)
118 cd07839 STKc_CDK5 Catalytic do 100.0 3.6E-37 7.8E-42 346.9 22.3 253 356-663 1-284 (284)
119 cd05615 STKc_cPKC_alpha Cataly 100.0 7.1E-37 1.5E-41 352.6 25.1 258 356-672 1-269 (323)
120 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.1E-36 2.5E-41 346.7 26.5 258 354-667 5-293 (301)
121 cd05575 STKc_SGK Catalytic dom 100.0 3.5E-37 7.5E-42 355.0 22.4 250 361-669 1-260 (323)
122 cd05623 STKc_MRCK_alpha Cataly 100.0 7E-37 1.5E-41 353.9 25.0 264 355-672 1-278 (332)
123 PTZ00283 serine/threonine prot 100.0 9.2E-37 2E-41 370.8 27.1 267 354-668 31-305 (496)
124 cd05619 STKc_nPKC_theta Cataly 100.0 5.2E-37 1.1E-41 352.7 23.6 252 361-671 1-259 (316)
125 cd07868 STKc_CDK8 Catalytic do 100.0 7.3E-37 1.6E-41 350.7 24.7 250 360-663 6-317 (317)
126 cd05622 STKc_ROCK1 Catalytic d 100.0 6.9E-37 1.5E-41 359.6 24.6 262 354-670 42-314 (371)
127 KOG0690 Serine/threonine prote 100.0 4.1E-38 8.8E-43 336.4 12.8 297 352-714 165-471 (516)
128 KOG0195 Integrin-linked kinase 100.0 1.1E-38 2.3E-43 333.8 8.1 338 226-658 85-440 (448)
129 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-36 2.6E-41 352.3 26.0 255 354-667 4-306 (333)
130 cd05608 STKc_GRK1 Catalytic do 100.0 9.3E-37 2E-41 344.0 23.7 249 363-670 1-267 (280)
131 cd05624 STKc_MRCK_beta Catalyt 100.0 1E-36 2.2E-41 352.5 24.5 264 355-672 1-278 (331)
132 PLN00034 mitogen-activated pro 100.0 1.1E-36 2.5E-41 355.2 24.8 253 353-666 72-334 (353)
133 cd05605 STKc_GRK4_like Catalyt 100.0 1.6E-36 3.5E-41 343.0 25.0 257 356-671 1-272 (285)
134 PHA03209 serine/threonine kina 100.0 7E-37 1.5E-41 357.7 22.6 247 355-666 66-357 (357)
135 cd05586 STKc_Sck1_like Catalyt 100.0 4.2E-37 9.2E-42 355.3 20.4 252 363-671 1-264 (330)
136 PTZ00266 NIMA-related protein 100.0 1.9E-36 4.1E-41 379.2 27.0 261 350-666 8-301 (1021)
137 cd05604 STKc_SGK3 Catalytic do 100.0 8.2E-37 1.8E-41 352.2 21.4 252 361-671 1-262 (325)
138 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.7E-36 3.6E-41 350.1 24.0 253 361-672 1-272 (327)
139 cd06625 STKc_MEKK3_like Cataly 100.0 5.7E-36 1.2E-40 332.8 26.8 255 355-663 2-263 (263)
140 PF00069 Pkinase: Protein kina 100.0 7.4E-37 1.6E-41 338.8 19.6 252 357-663 1-260 (260)
141 cd05602 STKc_SGK1 Catalytic do 100.0 1.4E-36 3E-41 350.4 21.8 251 361-670 1-261 (325)
142 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-36 3.4E-41 349.2 21.9 250 361-669 1-260 (321)
143 cd08223 STKc_Nek4 Catalytic do 100.0 9.5E-36 2.1E-40 329.9 27.3 251 356-663 1-257 (257)
144 cd08529 STKc_FA2-like Catalyti 100.0 1E-35 2.2E-40 329.2 27.2 250 356-663 1-256 (256)
145 cd07865 STKc_CDK9 Catalytic do 100.0 1E-35 2.2E-40 339.0 27.6 271 350-663 7-310 (310)
146 cd07845 STKc_CDK10 Catalytic d 100.0 6.7E-36 1.5E-40 341.6 26.0 263 352-667 4-297 (309)
147 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.1E-36 1.8E-40 335.8 26.2 254 355-663 1-286 (286)
148 cd07860 STKc_CDK2_3 Catalytic 100.0 5.9E-36 1.3E-40 337.1 24.5 253 356-663 1-284 (284)
149 PHA02988 hypothetical protein; 100.0 7.8E-36 1.7E-40 337.5 24.9 243 361-660 26-275 (283)
150 PTZ00267 NIMA-related protein 100.0 6.6E-36 1.4E-40 362.6 26.0 254 355-666 67-329 (478)
151 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-35 2.4E-40 340.6 25.7 249 361-663 7-317 (317)
152 PHA03207 serine/threonine kina 100.0 1E-35 2.2E-40 352.3 26.1 258 353-671 90-386 (392)
153 cd05607 STKc_GRK7 Catalytic do 100.0 8.9E-36 1.9E-40 335.5 24.0 248 363-669 1-263 (277)
154 KOG0586 Serine/threonine prote 100.0 2E-36 4.3E-41 350.7 18.6 258 351-667 52-313 (596)
155 cd05580 STKc_PKA Catalytic dom 100.0 1.9E-35 4.1E-40 334.8 26.3 255 355-671 1-265 (290)
156 KOG4279 Serine/threonine prote 100.0 5.2E-37 1.1E-41 352.5 13.5 248 362-666 582-838 (1226)
157 cd05609 STKc_MAST Catalytic do 100.0 3E-35 6.4E-40 335.8 28.1 275 355-670 1-283 (305)
158 cd08227 PK_STRAD_alpha Pseudok 100.0 1.2E-35 2.5E-40 342.8 24.7 264 359-670 2-317 (327)
159 PHA03211 serine/threonine kina 100.0 1.3E-35 2.7E-40 356.2 25.7 249 354-665 168-460 (461)
160 cd06645 STKc_MAP4K3 Catalytic 100.0 8E-36 1.7E-40 332.9 22.4 252 354-662 8-267 (267)
161 KOG0696 Serine/threonine prote 100.0 8.1E-37 1.8E-41 334.5 14.0 264 351-673 345-619 (683)
162 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-35 2.4E-40 336.9 23.6 257 354-663 4-293 (293)
163 cd07855 STKc_ERK5 Catalytic do 100.0 7.2E-36 1.6E-40 345.6 22.4 266 355-667 5-301 (334)
164 cd06631 STKc_YSK4 Catalytic do 100.0 2.9E-35 6.3E-40 328.0 26.5 257 356-663 1-265 (265)
165 cd06615 PKc_MEK Catalytic doma 100.0 2.2E-35 4.8E-40 337.6 26.2 252 355-666 1-293 (308)
166 KOG0986 G protein-coupled rece 100.0 1.1E-36 2.3E-41 338.7 14.5 266 354-681 184-465 (591)
167 cd06619 PKc_MKK5 Catalytic dom 100.0 2.2E-35 4.9E-40 332.3 25.4 252 355-669 1-262 (279)
168 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.9E-35 4.1E-40 332.6 24.8 256 355-669 1-270 (283)
169 KOG0667 Dual-specificity tyros 100.0 4.4E-36 9.5E-41 351.6 20.1 250 356-667 187-509 (586)
170 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.4E-35 7.3E-40 326.8 26.4 257 355-663 1-267 (267)
171 cd06652 STKc_MEKK2 Catalytic d 100.0 4.8E-35 1E-39 326.5 27.5 257 355-664 2-265 (265)
172 cd07832 STKc_CCRK Catalytic do 100.0 3E-35 6.5E-40 331.2 26.1 255 356-664 1-286 (286)
173 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-35 3E-40 346.0 24.2 261 353-666 14-317 (353)
174 cd06646 STKc_MAP4K5 Catalytic 100.0 1.6E-35 3.4E-40 330.6 23.5 252 354-662 8-267 (267)
175 cd05574 STKc_phototropin_like 100.0 3.4E-35 7.3E-40 336.8 26.9 275 355-671 1-300 (316)
176 cd07837 STKc_CdkB_plant Cataly 100.0 2.5E-35 5.4E-40 333.8 25.4 260 355-664 1-295 (295)
177 cd05096 PTKc_DDR1 Catalytic do 100.0 3E-35 6.4E-40 335.5 26.0 250 355-659 5-300 (304)
178 cd06651 STKc_MEKK3 Catalytic d 100.0 3.8E-35 8.3E-40 327.7 26.3 257 355-664 2-265 (266)
179 cd06613 STKc_MAP4K3_like Catal 100.0 4E-35 8.6E-40 325.6 26.2 251 355-662 3-262 (262)
180 cd05630 STKc_GRK6 Catalytic do 100.0 2.2E-35 4.9E-40 333.8 24.2 255 356-669 1-270 (285)
181 cd06637 STKc_TNIK Catalytic do 100.0 3.1E-35 6.8E-40 328.8 25.1 256 355-663 6-272 (272)
182 cd05632 STKc_GRK5 Catalytic do 100.0 4E-35 8.7E-40 331.6 26.1 257 357-670 2-271 (285)
183 cd06611 STKc_SLK_like Catalyti 100.0 2.1E-35 4.6E-40 332.1 23.6 256 355-667 5-269 (280)
184 cd06643 STKc_SLK Catalytic dom 100.0 3.5E-35 7.7E-40 330.9 25.5 256 356-668 6-270 (282)
185 PLN00009 cyclin-dependent kina 100.0 3.3E-35 7.2E-40 333.1 25.4 258 354-666 1-290 (294)
186 cd06644 STKc_STK10_LOK Catalyt 100.0 4.1E-35 8.9E-40 332.2 25.7 257 355-668 12-277 (292)
187 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.8E-35 3.9E-40 333.2 22.6 254 355-663 1-286 (286)
188 cd08221 STKc_Nek9 Catalytic do 100.0 8.4E-35 1.8E-39 322.4 27.4 250 356-663 1-256 (256)
189 cd07844 STKc_PCTAIRE_like Cata 100.0 4.9E-35 1.1E-39 331.0 26.0 254 354-663 4-291 (291)
190 cd08218 STKc_Nek1 Catalytic do 100.0 6.4E-35 1.4E-39 323.3 26.0 250 356-663 1-256 (256)
191 cd07835 STKc_CDK1_like Catalyt 100.0 3.2E-35 7E-40 330.9 23.9 252 357-663 1-283 (283)
192 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.4E-35 1.4E-39 325.4 26.1 255 357-663 2-267 (267)
193 cd07841 STKc_CDK7 Catalytic do 100.0 3.5E-35 7.5E-40 333.4 24.2 257 356-667 1-289 (298)
194 cd06612 STKc_MST1_2 Catalytic 100.0 3.2E-35 6.9E-40 325.2 23.3 249 355-663 3-256 (256)
195 KOG0584 Serine/threonine prote 100.0 2.2E-36 4.7E-41 350.5 14.4 256 349-666 37-302 (632)
196 cd07866 STKc_BUR1 Catalytic do 100.0 6.4E-35 1.4E-39 332.6 26.4 275 353-663 6-311 (311)
197 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.8E-35 1E-39 327.3 24.7 247 355-659 5-260 (266)
198 cd06655 STKc_PAK2 Catalytic do 100.0 6.7E-35 1.5E-39 331.8 26.2 253 355-666 19-275 (296)
199 cd05104 PTKc_Kit Catalytic dom 100.0 2.4E-35 5.2E-40 347.0 23.1 251 354-660 34-370 (375)
200 cd08217 STKc_Nek2 Catalytic do 100.0 9.6E-35 2.1E-39 322.1 26.4 252 356-663 1-265 (265)
201 cd07849 STKc_ERK1_2_like Catal 100.0 4.7E-35 1E-39 339.1 24.8 265 354-667 4-299 (336)
202 KOG0666 Cyclin C-dependent kin 100.0 2.2E-36 4.9E-41 322.3 12.5 265 352-667 21-344 (438)
203 cd06654 STKc_PAK1 Catalytic do 100.0 8.4E-35 1.8E-39 330.9 26.3 253 355-666 20-276 (296)
204 cd05048 PTKc_Ror Catalytic Dom 100.0 4.4E-35 9.5E-40 329.8 23.7 250 354-660 4-279 (283)
205 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-34 2.5E-39 328.2 27.1 253 355-663 5-291 (291)
206 KOG0596 Dual specificity; seri 100.0 7.6E-36 1.7E-40 339.1 17.3 256 354-666 360-633 (677)
207 cd07831 STKc_MOK Catalytic dom 100.0 8E-35 1.7E-39 327.0 25.3 251 357-663 1-282 (282)
208 cd05106 PTKc_CSF-1R Catalytic 100.0 3.3E-35 7.3E-40 345.6 23.2 251 354-660 37-368 (374)
209 cd07836 STKc_Pho85 Catalytic d 100.0 7.9E-35 1.7E-39 327.7 25.2 252 356-663 1-284 (284)
210 cd08220 STKc_Nek8 Catalytic do 100.0 1.3E-34 2.8E-39 320.3 26.0 249 356-663 1-256 (256)
211 cd06609 STKc_MST3_like Catalyt 100.0 6.9E-35 1.5E-39 326.9 24.1 254 355-668 1-259 (274)
212 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-34 2.6E-39 326.8 26.0 257 354-663 17-286 (286)
213 cd06608 STKc_myosinIII_like Ca 100.0 1.1E-34 2.3E-39 323.9 25.2 257 355-663 6-275 (275)
214 KOG1026 Nerve growth factor re 100.0 8.3E-36 1.8E-40 357.4 16.8 249 354-659 485-757 (774)
215 cd07833 STKc_CDKL Catalytic do 100.0 7.2E-35 1.6E-39 328.4 23.5 255 355-663 1-288 (288)
216 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.6E-35 1.2E-39 329.7 22.6 255 355-667 1-269 (286)
217 cd06605 PKc_MAPKK Catalytic do 100.0 5.7E-35 1.2E-39 325.1 22.1 253 355-667 1-264 (265)
218 cd06656 STKc_PAK3 Catalytic do 100.0 8.4E-35 1.8E-39 331.1 23.6 255 354-667 18-276 (297)
219 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-34 2.4E-39 332.9 24.7 249 354-660 6-264 (316)
220 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.4E-35 1.8E-39 337.2 23.6 263 354-666 4-297 (337)
221 KOG0604 MAP kinase-activated p 100.0 6.4E-36 1.4E-40 317.9 12.9 257 351-667 57-329 (400)
222 KOG4236 Serine/threonine prote 100.0 5.5E-36 1.2E-40 335.8 13.1 248 361-667 570-826 (888)
223 cd08228 STKc_Nek6 Catalytic do 100.0 2E-34 4.4E-39 321.4 25.5 249 355-660 2-261 (267)
224 cd06626 STKc_MEKK4 Catalytic d 100.0 3.4E-34 7.3E-39 318.5 27.1 257 356-663 1-264 (264)
225 KOG0983 Mitogen-activated prot 100.0 1.1E-35 2.4E-40 312.2 14.1 257 354-667 91-356 (391)
226 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.1E-34 4.5E-39 324.4 25.5 256 355-663 16-282 (282)
227 cd06632 STKc_MEKK1_plant Catal 100.0 2.3E-34 4.9E-39 318.5 25.3 251 356-663 1-258 (258)
228 cd06639 STKc_myosinIIIB Cataly 100.0 4E-34 8.8E-39 323.7 27.9 258 354-664 21-291 (291)
229 cd08219 STKc_Nek3 Catalytic do 100.0 2.7E-34 5.8E-39 318.4 25.9 247 356-661 1-253 (255)
230 cd05578 STKc_Yank1 Catalytic d 100.0 7.3E-35 1.6E-39 323.5 21.0 249 356-663 1-258 (258)
231 cd07834 STKc_MAPK Catalytic do 100.0 8.2E-35 1.8E-39 335.7 22.1 265 356-667 1-296 (330)
232 cd07840 STKc_CDK9_like Catalyt 100.0 2.1E-34 4.6E-39 323.9 24.9 255 357-663 1-287 (287)
233 cd06616 PKc_MKK4 Catalytic dom 100.0 1E-34 2.2E-39 328.0 22.3 256 355-667 4-274 (288)
234 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-34 2.5E-39 335.9 23.0 266 352-666 4-301 (337)
235 cd07842 STKc_CDK8_like Catalyt 100.0 1.9E-34 4.2E-39 329.6 24.5 258 356-663 1-316 (316)
236 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-34 4.9E-39 334.8 25.3 261 354-667 16-307 (345)
237 cd06630 STKc_MEKK1 Catalytic d 100.0 2.4E-34 5.3E-39 320.6 24.5 257 356-664 1-268 (268)
238 cd06607 STKc_TAO Catalytic dom 100.0 3.4E-34 7.4E-39 327.4 26.1 253 355-667 15-274 (307)
239 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-34 5.1E-39 319.7 24.1 243 362-660 2-251 (257)
240 cd07879 STKc_p38delta_MAPK13 C 100.0 1.8E-34 3.9E-39 335.3 24.0 260 354-667 14-304 (342)
241 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.8E-34 8.1E-39 317.6 25.5 245 355-660 4-254 (256)
242 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-34 4.1E-39 325.4 23.4 253 354-667 4-273 (284)
243 cd07864 STKc_CDK12 Catalytic d 100.0 2.8E-34 6.1E-39 326.4 25.0 268 352-663 4-302 (302)
244 PHA03210 serine/threonine kina 100.0 1.3E-34 2.7E-39 353.0 23.1 266 351-671 144-465 (501)
245 cd06623 PKc_MAPKK_plant_like C 100.0 4.3E-34 9.4E-39 317.3 25.3 254 355-666 1-262 (264)
246 KOG0662 Cyclin-dependent kinas 100.0 3.5E-35 7.6E-40 291.3 14.7 257 355-666 2-289 (292)
247 cd06653 STKc_MEKK3_like_1 Cata 100.0 7.2E-34 1.6E-38 317.0 27.2 255 355-662 2-263 (264)
248 cd05054 PTKc_VEGFR Catalytic d 100.0 1.5E-34 3.2E-39 335.4 22.4 251 355-660 7-329 (337)
249 cd06624 STKc_ASK Catalytic dom 100.0 4.3E-34 9.3E-39 319.4 25.2 250 357-663 10-268 (268)
250 PRK13184 pknD serine/threonine 100.0 3.2E-34 6.9E-39 358.2 26.7 266 354-660 1-285 (932)
251 cd07857 STKc_MPK1 Catalytic do 100.0 4.2E-34 9.1E-39 330.6 25.9 264 356-666 1-298 (332)
252 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.9E-34 8.4E-39 332.6 25.7 262 353-667 13-305 (343)
253 cd08225 STKc_Nek5 Catalytic do 100.0 3.8E-34 8.3E-39 316.7 24.4 250 356-663 1-257 (257)
254 cd05090 PTKc_Ror1 Catalytic do 100.0 3.9E-34 8.5E-39 322.5 24.8 250 354-660 4-279 (283)
255 KOG1989 ARK protein kinase fam 100.0 7.2E-35 1.6E-39 351.3 19.8 258 355-660 37-307 (738)
256 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-34 2.3E-39 329.6 20.1 254 355-667 22-279 (292)
257 KOG0607 MAP kinase-interacting 100.0 1.9E-35 4.1E-40 316.0 13.1 272 348-669 70-370 (463)
258 cd05572 STKc_cGK_PKG Catalytic 100.0 3.1E-34 6.8E-39 319.2 23.4 248 363-668 1-260 (262)
259 KOG0608 Warts/lats-like serine 100.0 5E-35 1.1E-39 334.0 17.0 291 355-688 629-960 (1034)
260 cd05633 STKc_GRK3 Catalytic do 100.0 4E-34 8.8E-39 322.5 24.4 248 362-669 1-264 (279)
261 cd06629 STKc_MAPKKK_Bck1_like 100.0 6.5E-34 1.4E-38 318.4 25.5 255 356-663 2-272 (272)
262 cd07851 STKc_p38 Catalytic dom 100.0 2.1E-34 4.6E-39 334.8 22.2 262 353-667 13-305 (343)
263 cd05062 PTKc_IGF-1R Catalytic 100.0 6E-34 1.3E-38 320.0 25.0 250 354-660 5-274 (277)
264 cd05075 PTKc_Axl Catalytic dom 100.0 6.5E-34 1.4E-38 318.2 25.1 253 358-660 2-267 (272)
265 cd05109 PTKc_HER2 Catalytic do 100.0 7.2E-34 1.6E-38 319.7 25.4 249 354-660 6-264 (279)
266 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 7E-34 1.5E-38 328.5 25.9 256 354-667 9-295 (328)
267 KOG0194 Protein tyrosine kinas 100.0 1.1E-34 2.4E-39 338.8 19.2 249 355-660 157-416 (474)
268 cd06659 STKc_PAK6 Catalytic do 100.0 2.4E-34 5.3E-39 327.4 21.7 252 356-666 22-277 (297)
269 cd05049 PTKc_Trk Catalytic dom 100.0 3.7E-34 8E-39 321.6 22.8 250 354-660 4-277 (280)
270 cd05084 PTKc_Fes Catalytic dom 100.0 7.2E-34 1.6E-38 314.4 24.8 243 361-660 1-249 (252)
271 cd05052 PTKc_Abl Catalytic dom 100.0 8.4E-34 1.8E-38 316.3 25.4 246 355-660 6-258 (263)
272 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.5E-34 1.2E-38 331.2 24.4 272 354-666 4-306 (342)
273 cd08229 STKc_Nek7 Catalytic do 100.0 4.3E-34 9.3E-39 318.7 22.5 248 355-659 2-260 (267)
274 cd06917 STKc_NAK1_like Catalyt 100.0 5.2E-34 1.1E-38 320.1 23.2 253 356-667 2-262 (277)
275 PF07714 Pkinase_Tyr: Protein 100.0 2.4E-34 5.3E-39 320.8 20.4 245 358-659 2-257 (259)
276 PRK14799 thrS threonyl-tRNA sy 100.0 5.3E-34 1.1E-38 342.8 24.8 357 713-1161 155-533 (545)
277 PTZ00024 cyclin-dependent prot 100.0 8.3E-34 1.8E-38 328.3 25.6 272 355-667 8-320 (335)
278 cd08226 PK_STRAD_beta Pseudoki 100.0 3.5E-34 7.5E-39 330.7 22.1 261 361-669 4-317 (328)
279 cd05035 PTKc_Axl_like Catalyti 100.0 1.1E-33 2.3E-38 316.1 25.3 254 357-660 1-268 (273)
280 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.3E-33 2.9E-38 314.2 26.0 248 355-659 2-260 (267)
281 cd07838 STKc_CDK4_6_like Catal 100.0 9.2E-34 2E-38 319.0 24.9 255 357-663 1-287 (287)
282 cd06640 STKc_MST4 Catalytic do 100.0 6E-34 1.3E-38 320.2 23.3 253 355-667 4-260 (277)
283 cd05606 STKc_beta_ARK Catalyti 100.0 8.3E-34 1.8E-38 319.7 24.4 250 362-671 1-266 (278)
284 cd06606 STKc_MAPKKK Catalytic 100.0 1.8E-33 3.9E-38 310.0 26.4 256 356-663 1-260 (260)
285 cd06648 STKc_PAK_II Catalytic 100.0 1.3E-33 2.7E-38 319.4 25.8 253 356-667 20-276 (285)
286 cd05105 PTKc_PDGFR_alpha Catal 100.0 6.3E-34 1.4E-38 337.1 24.4 251 354-660 36-393 (400)
287 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.8E-33 3.8E-38 318.3 26.8 257 355-668 1-274 (287)
288 cd05051 PTKc_DDR Catalytic dom 100.0 8.8E-34 1.9E-38 321.4 24.4 252 354-660 4-293 (296)
289 cd05032 PTKc_InsR_like Catalyt 100.0 1.4E-33 3.1E-38 316.3 25.6 250 354-660 5-274 (277)
290 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-33 2.4E-38 314.5 24.5 245 355-660 4-254 (256)
291 KOG0669 Cyclin T-dependent kin 100.0 4.8E-36 1E-40 311.6 5.1 273 352-667 14-322 (376)
292 cd05088 PTKc_Tie2 Catalytic do 100.0 8.9E-34 1.9E-38 323.6 24.4 247 354-660 6-276 (303)
293 cd05061 PTKc_InsR Catalytic do 100.0 1.6E-33 3.4E-38 318.8 26.1 256 354-666 5-286 (288)
294 cd08215 STKc_Nek Catalytic dom 100.0 2E-33 4.4E-38 309.9 26.1 250 356-663 1-258 (258)
295 cd05111 PTK_HER3 Pseudokinase 100.0 1.4E-33 3E-38 317.9 25.1 249 354-660 6-264 (279)
296 cd05033 PTKc_EphR Catalytic do 100.0 2.1E-33 4.7E-38 313.4 26.3 249 355-660 4-261 (266)
297 cd05091 PTKc_Ror2 Catalytic do 100.0 5.6E-34 1.2E-38 321.0 21.7 250 354-660 4-279 (283)
298 cd05072 PTKc_Lyn Catalytic dom 100.0 1.4E-33 3.1E-38 313.7 24.6 245 354-659 5-256 (261)
299 cd06627 STKc_Cdc7_like Catalyt 100.0 2.6E-33 5.6E-38 309.0 26.4 250 356-663 1-254 (254)
300 KOG0614 cGMP-dependent protein 100.0 7.9E-36 1.7E-40 334.5 6.2 262 353-672 418-689 (732)
301 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-33 3.7E-38 317.3 25.1 252 355-659 3-276 (283)
302 cd06641 STKc_MST3 Catalytic do 100.0 2.1E-33 4.5E-38 315.8 25.7 252 356-667 5-260 (277)
303 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-33 3.1E-38 313.2 24.0 245 355-660 4-254 (256)
304 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-33 5.2E-38 322.1 26.5 252 355-666 25-283 (317)
305 cd08530 STKc_CNK2-like Catalyt 100.0 2.1E-33 4.6E-38 310.3 25.0 247 356-662 1-255 (256)
306 cd05053 PTKc_FGFR Catalytic do 100.0 1.5E-33 3.3E-38 319.2 24.3 250 354-660 11-287 (293)
307 cd05611 STKc_Rim15_like Cataly 100.0 1E-33 2.2E-38 314.7 22.4 248 361-668 2-259 (260)
308 PHA03390 pk1 serine/threonine- 100.0 9.9E-34 2.1E-38 317.3 22.5 246 353-665 12-267 (267)
309 cd05060 PTKc_Syk_like Catalyti 100.0 2.3E-33 5E-38 311.5 25.2 243 361-660 1-251 (257)
310 cd05093 PTKc_TrkB Catalytic do 100.0 2.1E-33 4.5E-38 317.8 25.2 247 355-659 5-274 (288)
311 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-33 3.9E-38 316.3 24.5 250 354-660 5-274 (277)
312 cd05097 PTKc_DDR_like Catalyti 100.0 1.5E-33 3.3E-38 320.0 24.1 251 355-660 5-292 (295)
313 cd05103 PTKc_VEGFR2 Catalytic 100.0 9.8E-34 2.1E-38 329.3 22.9 251 355-660 7-335 (343)
314 cd06618 PKc_MKK7 Catalytic dom 100.0 2.7E-33 5.8E-38 318.2 26.0 258 354-668 14-281 (296)
315 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.4E-34 9.5E-39 321.1 19.3 252 355-666 4-259 (277)
316 cd05089 PTKc_Tie1 Catalytic do 100.0 2E-33 4.4E-38 319.5 24.9 246 355-660 2-271 (297)
317 cd05577 STKc_GRK Catalytic dom 100.0 1.6E-33 3.4E-38 316.8 23.6 248 363-669 1-263 (277)
318 cd05581 STKc_PDK1 Catalytic do 100.0 1.5E-33 3.2E-38 315.9 23.3 265 355-663 1-280 (280)
319 cd05115 PTKc_Zap-70 Catalytic 100.0 2.6E-33 5.6E-38 311.8 25.1 242 362-660 2-251 (257)
320 KOG4645 MAPKKK (MAP kinase kin 100.0 1E-35 2.2E-40 364.5 6.1 253 360-664 1240-1498(1509)
321 cd05122 PKc_STE Catalytic doma 100.0 4.4E-33 9.5E-38 305.6 26.2 248 356-662 1-253 (253)
322 cd06614 STKc_PAK Catalytic dom 100.0 2.1E-33 4.5E-38 317.2 24.3 255 354-667 18-277 (286)
323 cd00192 PTKc Catalytic domain 100.0 2.9E-33 6.3E-38 309.4 24.9 243 361-660 1-260 (262)
324 cd07829 STKc_CDK_like Catalyti 100.0 1.6E-33 3.5E-38 316.1 22.7 252 357-663 1-282 (282)
325 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.2E-33 4.8E-38 316.7 23.7 252 356-660 5-279 (284)
326 cd05118 STKc_CMGC Catalytic do 100.0 1.6E-33 3.4E-38 316.4 22.2 252 357-663 1-283 (283)
327 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-33 3.2E-38 320.2 22.0 255 354-667 18-276 (293)
328 cd06633 STKc_TAO3 Catalytic do 100.0 6.5E-33 1.4E-37 318.1 27.2 252 355-667 21-280 (313)
329 cd05579 STKc_MAST_like Catalyt 100.0 1.9E-33 4.2E-38 311.7 22.0 256 363-667 1-264 (265)
330 cd06634 STKc_TAO2 Catalytic do 100.0 3.6E-33 7.8E-38 319.4 24.7 253 355-667 15-274 (308)
331 cd05068 PTKc_Frk_like Catalyti 100.0 5.2E-33 1.1E-37 309.4 25.2 244 355-659 6-256 (261)
332 cd05050 PTKc_Musk Catalytic do 100.0 3.6E-33 7.9E-38 315.5 24.2 249 354-659 4-284 (288)
333 KOG1095 Protein tyrosine kinas 100.0 1.4E-33 3E-38 349.7 22.3 248 355-659 692-956 (1025)
334 cd05610 STKc_MASTL Catalytic d 100.0 4.7E-33 1E-37 349.6 27.6 149 354-542 3-153 (669)
335 KOG1187 Serine/threonine prote 100.0 1.4E-33 2.9E-38 327.6 21.0 248 354-660 74-348 (361)
336 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-33 3.5E-38 313.0 20.8 246 354-660 5-257 (261)
337 cd05066 PTKc_EphR_A Catalytic 100.0 5E-33 1.1E-37 310.8 24.8 249 355-659 4-261 (267)
338 cd05055 PTKc_PDGFR Catalytic d 100.0 4.6E-33 1E-37 317.7 24.8 251 354-660 34-297 (302)
339 cd05082 PTKc_Csk Catalytic dom 100.0 5.1E-33 1.1E-37 308.6 24.4 241 354-660 5-252 (256)
340 cd07830 STKc_MAK_like Catalyti 100.0 3.6E-33 7.7E-38 314.0 23.4 250 357-663 1-283 (283)
341 KOG0695 Serine/threonine prote 100.0 4.6E-34 1E-38 305.7 14.9 262 353-673 248-529 (593)
342 cd05065 PTKc_EphR_B Catalytic 100.0 6.6E-33 1.4E-37 310.0 25.0 253 354-660 3-264 (269)
343 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.7E-33 1.2E-37 308.9 24.2 244 354-659 5-255 (260)
344 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.3E-33 1.4E-37 312.7 24.9 252 355-660 4-279 (284)
345 cd05071 PTKc_Src Catalytic dom 100.0 6.8E-33 1.5E-37 309.2 24.9 243 355-659 6-255 (262)
346 cd05094 PTKc_TrkC Catalytic do 100.0 6.1E-33 1.3E-37 314.4 24.6 248 355-660 5-278 (291)
347 cd05063 PTKc_EphR_A2 Catalytic 100.0 1E-32 2.2E-37 308.1 25.6 250 355-660 5-263 (268)
348 cd05039 PTKc_Csk_like Catalyti 100.0 9.4E-33 2E-37 306.2 25.1 241 354-660 5-252 (256)
349 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.7E-33 1.5E-37 316.7 24.5 249 355-660 18-295 (307)
350 cd05092 PTKc_TrkA Catalytic do 100.0 7E-33 1.5E-37 312.2 24.0 247 355-659 5-276 (280)
351 cd08216 PK_STRAD Pseudokinase 100.0 4E-33 8.8E-38 319.1 22.2 253 367-667 12-302 (314)
352 cd05040 PTKc_Ack_like Catalyti 100.0 1E-32 2.2E-37 305.9 24.7 244 361-660 1-254 (257)
353 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-32 2.3E-37 306.7 24.9 244 354-659 5-255 (260)
354 cd05107 PTKc_PDGFR_beta Cataly 100.0 5E-33 1.1E-37 329.3 23.6 251 354-660 36-395 (401)
355 cd05101 PTKc_FGFR2 Catalytic d 100.0 7.4E-33 1.6E-37 315.8 24.2 250 354-660 14-292 (304)
356 cd06657 STKc_PAK4 Catalytic do 100.0 4.2E-33 9.2E-38 316.5 21.9 253 356-667 21-277 (292)
357 cd05095 PTKc_DDR2 Catalytic do 100.0 8.3E-33 1.8E-37 314.2 24.2 250 355-659 5-292 (296)
358 cd05046 PTK_CCK4 Pseudokinase 100.0 1.1E-32 2.5E-37 308.8 24.7 249 355-660 5-272 (275)
359 KOG4257 Focal adhesion tyrosin 100.0 1.5E-33 3.4E-38 321.8 17.7 244 357-659 391-644 (974)
360 KOG0603 Ribosomal protein S6 k 100.0 1.7E-33 3.7E-38 328.1 18.4 244 350-663 317-566 (612)
361 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-32 2.8E-37 309.5 24.9 251 354-660 5-272 (280)
362 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.9E-33 4.2E-38 312.7 17.9 235 361-660 1-256 (258)
363 KOG2345 Serine/threonine prote 100.0 3.7E-34 8.1E-39 298.4 11.2 263 354-660 20-296 (302)
364 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-32 2.9E-37 311.4 24.8 248 356-660 1-282 (290)
365 cd05058 PTKc_Met_Ron Catalytic 100.0 1.3E-32 2.8E-37 305.9 24.3 246 361-660 1-255 (262)
366 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-32 2.9E-37 311.1 24.7 260 356-671 1-279 (290)
367 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-32 3.6E-37 305.3 25.0 243 355-659 6-255 (260)
368 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6E-33 1.3E-37 309.9 21.2 235 361-660 1-260 (262)
369 cd05056 PTKc_FAK Catalytic dom 100.0 1.7E-32 3.8E-37 306.7 24.9 247 355-660 6-261 (270)
370 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.9E-32 4.1E-37 314.2 25.8 249 355-660 12-289 (314)
371 cd05112 PTKc_Itk Catalytic dom 100.0 2.6E-32 5.6E-37 302.4 25.5 245 355-660 4-254 (256)
372 cd05034 PTKc_Src_like Catalyti 100.0 2.7E-32 5.8E-37 303.2 25.5 245 354-659 5-256 (261)
373 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.1E-32 4.6E-37 306.1 24.7 245 361-660 1-266 (269)
374 PHA02882 putative serine/threo 100.0 2E-32 4.3E-37 311.3 24.8 257 355-659 12-291 (294)
375 cd05085 PTKc_Fer Catalytic dom 100.0 3E-32 6.4E-37 300.9 25.1 241 361-660 1-247 (250)
376 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 9.3E-33 2E-37 310.6 21.3 234 362-660 2-272 (274)
377 cd05110 PTKc_HER4 Catalytic do 100.0 1.9E-32 4.2E-37 312.5 24.2 249 354-660 6-264 (303)
378 cd05047 PTKc_Tie Catalytic dom 100.0 2.4E-32 5.2E-37 306.0 24.2 239 362-660 2-264 (270)
379 cd05042 PTKc_Aatyk Catalytic d 100.0 2.4E-32 5.2E-37 305.5 24.0 244 361-659 1-265 (269)
380 smart00219 TyrKc Tyrosine kina 100.0 3.4E-32 7.5E-37 300.7 24.7 245 357-659 1-256 (258)
381 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.7E-32 5.9E-37 315.7 24.9 249 355-660 12-289 (334)
382 cd05057 PTKc_EGFR_like Catalyt 100.0 5.1E-32 1.1E-36 304.6 25.8 247 355-659 7-263 (279)
383 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2E-32 4.3E-37 303.4 21.7 233 361-660 1-257 (259)
384 cd05041 PTKc_Fes_like Catalyti 100.0 5.1E-32 1.1E-36 299.2 24.5 242 361-660 1-248 (251)
385 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.2E-32 6.8E-37 306.0 23.0 253 355-660 4-279 (284)
386 cd05086 PTKc_Aatyk2 Catalytic 100.0 6.5E-32 1.4E-36 302.3 25.1 244 362-660 2-265 (268)
387 cd08222 STKc_Nek11 Catalytic d 100.0 2.6E-32 5.7E-37 303.3 21.7 249 356-663 1-260 (260)
388 cd05583 STKc_MSK_N N-terminal 100.0 3.7E-32 8E-37 307.2 23.1 259 356-671 1-277 (288)
389 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.6E-32 1.4E-36 302.1 24.2 254 357-660 1-268 (273)
390 cd05123 STKc_AGC Catalytic dom 100.0 4.5E-32 9.7E-37 298.9 22.4 242 363-663 1-250 (250)
391 KOG0199 ACK and related non-re 100.0 3.9E-33 8.4E-38 322.2 14.0 255 349-660 104-368 (1039)
392 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-31 3.1E-36 297.8 26.2 244 354-659 5-255 (260)
393 cd05083 PTKc_Chk Catalytic dom 100.0 5.9E-32 1.3E-36 299.7 22.9 239 354-660 5-250 (254)
394 cd05044 PTKc_c-ros Catalytic d 100.0 6.7E-32 1.4E-36 301.4 22.3 242 362-660 2-266 (269)
395 KOG4278 Protein tyrosine kinas 100.0 1.6E-32 3.4E-37 312.2 17.2 245 356-660 268-519 (1157)
396 KOG0196 Tyrosine kinase, EPH ( 100.0 1.4E-32 3.1E-37 322.1 17.0 251 354-660 628-887 (996)
397 KOG1006 Mitogen-activated prot 100.0 1.3E-33 2.8E-38 296.1 7.1 254 355-666 64-333 (361)
398 cd08528 STKc_Nek10 Catalytic d 100.0 1.7E-31 3.8E-36 298.3 24.3 247 356-660 1-266 (269)
399 KOG0587 Traf2- and Nck-interac 100.0 3.6E-32 7.9E-37 323.7 19.4 260 355-667 19-289 (953)
400 KOG2052 Activin A type IB rece 100.0 3E-32 6.6E-37 303.9 17.2 265 340-659 196-498 (513)
401 KOG1094 Discoidin domain recep 100.0 4.2E-32 9.1E-37 309.1 16.4 249 356-660 539-800 (807)
402 cd05576 STKc_RPK118_like Catal 100.0 1.1E-31 2.4E-36 295.2 19.0 228 366-663 4-237 (237)
403 KOG0671 LAMMER dual specificit 100.0 1.5E-32 3.3E-37 302.1 10.9 255 351-667 85-413 (415)
404 PRK09194 prolyl-tRNA synthetas 100.0 2.8E-30 6E-35 316.8 31.1 436 705-1156 28-561 (565)
405 PLN03225 Serine/threonine-prot 100.0 1.7E-31 3.7E-36 327.9 19.9 261 353-667 130-457 (566)
406 KOG0576 Mitogen-activated prot 100.0 3.6E-32 7.7E-37 314.5 8.4 272 354-682 14-294 (829)
407 KOG1151 Tousled-like protein k 100.0 9.1E-32 2E-36 296.8 10.1 263 355-665 463-746 (775)
408 PLN02908 threonyl-tRNA synthet 100.0 5.7E-30 1.2E-34 319.6 26.7 354 713-1161 308-684 (686)
409 KOG3653 Transforming growth fa 100.0 9.3E-31 2E-35 294.1 16.9 249 354-659 209-498 (534)
410 KOG0668 Casein kinase II, alph 100.0 2.2E-31 4.8E-36 273.7 10.7 253 353-667 36-329 (338)
411 KOG4250 TANK binding protein k 100.0 2.8E-31 6E-36 311.4 12.1 246 356-653 14-297 (732)
412 KOG0665 Jun-N-terminal kinase 100.0 3.2E-31 6.9E-36 285.6 11.3 256 355-664 17-314 (369)
413 KOG0664 Nemo-like MAPK-related 100.0 4.9E-32 1.1E-36 284.0 4.1 261 356-666 54-349 (449)
414 KOG1027 Serine/threonine prote 100.0 4.7E-31 1E-35 312.9 12.3 247 360-668 514-775 (903)
415 smart00220 S_TKc Serine/Threon 100.0 1.7E-29 3.7E-34 274.9 22.2 238 367-663 1-244 (244)
416 PLN03224 probable serine/threo 100.0 4.4E-29 9.5E-34 299.8 24.1 267 352-665 142-505 (507)
417 KOG0200 Fibroblast/platelet-de 100.0 7.3E-29 1.6E-33 307.5 22.1 248 356-660 297-575 (609)
418 KOG1290 Serine/threonine prote 100.0 2.3E-28 5E-33 275.1 21.0 134 355-527 78-222 (590)
419 TIGR00409 proS_fam_II prolyl-t 100.0 3.2E-28 6.9E-33 296.1 23.7 443 704-1157 27-567 (568)
420 PLN00113 leucine-rich repeat r 100.0 1.3E-28 2.8E-33 324.0 19.4 236 355-660 690-947 (968)
421 KOG0670 U4/U6-associated splic 100.0 3.7E-29 8E-34 281.8 11.3 251 354-665 431-751 (752)
422 PRK12325 prolyl-tRNA synthetas 100.0 1.9E-27 4.2E-32 283.1 26.7 371 713-1156 34-438 (439)
423 KOG1025 Epidermal growth facto 100.0 7.3E-29 1.6E-33 291.4 14.2 246 357-660 698-953 (1177)
424 KOG0984 Mitogen-activated prot 100.0 9E-29 2E-33 251.5 12.0 199 354-609 45-255 (282)
425 KOG1152 Signal transduction se 100.0 5.9E-29 1.3E-33 283.6 10.6 197 354-607 560-770 (772)
426 cd00180 PKc Catalytic domain o 99.9 8.9E-26 1.9E-30 238.9 22.7 212 363-661 1-215 (215)
427 PRK04173 glycyl-tRNA synthetas 99.9 8.3E-26 1.8E-30 268.9 22.8 324 714-1158 26-455 (456)
428 KOG1167 Serine/threonine prote 99.9 7.2E-27 1.6E-31 261.1 12.6 267 354-667 35-388 (418)
429 PLN00181 protein SPA1-RELATED; 99.9 6.1E-27 1.3E-31 300.9 12.1 198 467-666 53-271 (793)
430 TIGR00408 proS_fam_I prolyl-tR 99.9 1.8E-25 3.9E-30 267.8 21.3 328 713-1165 25-387 (472)
431 PRK08661 prolyl-tRNA synthetas 99.9 1.1E-24 2.5E-29 261.5 25.0 327 715-1165 33-393 (477)
432 KOG1345 Serine/threonine kinas 99.9 2.8E-26 6E-31 241.6 8.6 245 346-651 15-275 (378)
433 KOG1024 Receptor-like protein 99.9 1.5E-25 3.3E-30 245.8 14.2 249 355-659 284-550 (563)
434 smart00221 STYKc Protein kinas 99.9 5.3E-24 1.2E-28 229.8 21.6 209 357-620 1-215 (225)
435 PLN02837 threonine-tRNA ligase 99.9 2.2E-23 4.7E-28 257.4 26.7 352 714-1161 235-610 (614)
436 KOG1033 eIF-2alpha kinase PEK/ 99.9 4.7E-25 1E-29 253.4 6.7 298 350-662 44-514 (516)
437 PRK03991 threonyl-tRNA synthet 99.9 3.1E-22 6.7E-27 244.8 30.8 347 715-1162 216-595 (613)
438 smart00750 KIND kinase non-cat 99.9 2.3E-23 4.9E-28 218.0 12.6 157 478-663 1-168 (176)
439 PRK09188 serine/threonine prot 99.9 1.5E-22 3.2E-27 234.1 16.1 176 350-582 13-194 (365)
440 KOG1165 Casein kinase (serine/ 99.9 3E-21 6.5E-26 209.0 17.2 261 355-696 28-301 (449)
441 COG0515 SPS1 Serine/threonine 99.9 2.9E-20 6.3E-25 208.6 24.6 253 357-661 2-276 (384)
442 COG0441 ThrS Threonyl-tRNA syn 99.9 1.3E-20 2.8E-25 225.8 21.7 354 713-1162 207-583 (589)
443 KOG0590 Checkpoint kinase and 99.9 1.7E-22 3.7E-27 247.9 5.4 261 358-669 321-594 (601)
444 KOG1164 Casein kinase (serine/ 99.8 6.4E-20 1.4E-24 211.6 23.1 256 356-660 19-293 (322)
445 KOG1163 Casein kinase (serine/ 99.8 2.6E-20 5.7E-25 193.9 17.7 258 348-658 8-278 (341)
446 KOG0603 Ribosomal protein S6 k 99.8 4E-22 8.6E-27 233.4 4.2 241 362-671 1-254 (612)
447 KOG1240 Protein kinase contain 99.8 7E-21 1.5E-25 231.4 7.5 272 356-682 24-316 (1431)
448 KOG0606 Microtubule-associated 99.8 1.4E-20 3E-25 229.2 9.8 237 354-669 82-324 (1205)
449 cd00670 Gly_His_Pro_Ser_Thr_tR 99.8 4.9E-20 1.1E-24 202.9 12.7 138 726-865 2-159 (235)
450 KOG4158 BRPK/PTEN-induced prot 99.8 3.8E-20 8.2E-25 204.1 11.3 281 351-655 153-505 (598)
451 cd05147 RIO1_euk RIO kinase fa 99.8 7.3E-20 1.6E-24 194.8 11.0 140 360-543 2-167 (190)
452 cd05145 RIO1_like RIO kinase f 99.8 5.3E-19 1.2E-23 188.3 13.7 141 360-544 2-168 (190)
453 cd00771 ThrRS_core Threonyl-tR 99.8 9.5E-19 2.1E-23 198.9 14.4 149 714-864 18-183 (298)
454 PRK10359 lipopolysaccharide co 99.8 7.7E-19 1.7E-23 189.9 12.0 179 354-603 30-216 (232)
455 KOG4018 Uncharacterized conser 99.8 7.6E-20 1.6E-24 187.5 3.1 104 2-116 42-146 (215)
456 cd00779 ProRS_core_prok Prolyl 99.8 2.4E-19 5.2E-24 199.2 7.1 158 705-866 12-186 (255)
457 PF14531 Kinase-like: Kinase-l 99.7 4.2E-18 9.1E-23 189.4 11.0 248 356-651 13-288 (288)
458 PRK10345 hypothetical protein; 99.7 2.9E-17 6.3E-22 176.9 15.2 137 359-540 6-156 (210)
459 PRK12274 serine/threonine prot 99.7 1.1E-16 2.5E-21 169.7 14.6 190 358-604 5-202 (218)
460 KOG1637 Threonyl-tRNA syntheta 99.7 3.6E-16 7.9E-21 175.3 18.7 353 712-1158 178-554 (560)
461 TIGR00389 glyS_dimeric glycyl- 99.7 2.1E-15 4.6E-20 180.3 25.8 121 1036-1158 414-550 (551)
462 smart00090 RIO RIO-like kinase 99.7 7.3E-17 1.6E-21 177.6 11.3 143 356-543 29-198 (237)
463 KOG1023 Natriuretic peptide re 99.7 2.2E-16 4.8E-21 186.0 12.4 234 408-700 1-258 (484)
464 cd00772 ProRS_core Prolyl-tRNA 99.7 5.6E-16 1.2E-20 172.9 13.6 155 706-863 13-190 (264)
465 PRK14879 serine/threonine prot 99.6 2.5E-15 5.5E-20 162.2 14.1 135 361-542 2-143 (211)
466 cd05144 RIO2_C RIO kinase fami 99.6 1.8E-15 3.8E-20 162.3 12.0 136 357-543 17-175 (198)
467 cd00774 GlyRS-like_core Glycyl 99.6 1.6E-15 3.5E-20 168.6 10.5 134 713-854 19-169 (254)
468 PLN02734 glycyl-tRNA synthetas 99.6 1.1E-14 2.4E-19 176.4 16.5 121 1036-1161 528-663 (684)
469 COG0423 GRS1 Glycyl-tRNA synth 99.6 1.3E-14 2.9E-19 167.1 16.0 125 1036-1162 415-554 (558)
470 KOG1166 Mitotic checkpoint ser 99.6 3.6E-15 7.7E-20 186.8 12.3 190 354-603 697-897 (974)
471 TIGR03724 arch_bud32 Kae1-asso 99.6 8.6E-15 1.9E-19 156.7 12.5 131 362-542 1-138 (199)
472 PRK14894 glycyl-tRNA synthetas 99.6 6.1E-14 1.3E-18 162.7 20.2 96 1062-1159 432-537 (539)
473 KOG0590 Checkpoint kinase and 99.6 2.8E-16 6.2E-21 193.3 0.5 260 354-665 19-291 (601)
474 cd05119 RIO RIO kinase family, 99.6 1.3E-14 2.9E-19 153.6 11.8 136 360-543 2-164 (187)
475 PRK09605 bifunctional UGMP fam 99.6 1.8E-14 3.9E-19 177.6 14.2 136 356-542 334-476 (535)
476 COG0442 ProS Prolyl-tRNA synth 99.5 4.3E-14 9.3E-19 167.1 11.1 400 704-1155 27-498 (500)
477 KOG0601 Cyclin-dependent kinas 99.5 1.1E-14 2.3E-19 171.8 6.0 261 354-666 113-385 (524)
478 PRK01723 3-deoxy-D-manno-octul 99.5 3.8E-13 8.2E-18 148.5 15.1 139 361-542 37-191 (239)
479 TIGR02367 PylS pyrrolysyl-tRNA 99.5 2.7E-13 5.8E-18 156.0 13.6 123 728-858 241-375 (453)
480 PF00587 tRNA-synt_2b: tRNA sy 99.4 1.8E-13 3.9E-18 143.6 9.4 136 728-864 1-154 (173)
481 KOG2324 Prolyl-tRNA synthetase 99.4 1.4E-12 3.1E-17 142.6 15.0 352 705-1155 33-426 (457)
482 KOG0606 Microtubule-associated 99.4 1.9E-13 4E-18 167.9 6.9 282 353-675 802-1107(1205)
483 cd05120 APH_ChoK_like Aminogly 99.4 1.4E-12 3E-17 131.3 11.9 131 359-542 2-138 (155)
484 PRK04172 pheS phenylalanyl-tRN 99.4 9.6E-13 2.1E-17 159.4 12.4 147 708-858 215-408 (489)
485 cd00778 ProRS_core_arch_euk Pr 99.4 4.8E-13 1E-17 149.4 7.2 140 714-853 20-182 (261)
486 PF03129 HGTP_anticodon: Antic 99.3 3.8E-12 8.3E-17 119.6 9.4 90 1066-1157 1-93 (94)
487 KOG0601 Cyclin-dependent kinas 99.3 1.1E-12 2.4E-17 154.9 5.5 250 350-662 260-516 (524)
488 cd00861 ProRS_anticodon_short 99.3 1.8E-11 3.8E-16 114.9 10.5 91 1064-1155 1-93 (94)
489 cd00860 ThrRS_anticodon ThrRS 99.3 3.3E-11 7.2E-16 112.2 11.4 90 1064-1155 1-90 (91)
490 cd00858 GlyRS_anticodon GlyRS 99.3 4.7E-11 1E-15 117.7 12.3 97 1061-1159 23-120 (121)
491 cd00862 ProRS_anticodon_zinc P 99.2 4.9E-11 1.1E-15 127.9 12.5 106 1060-1166 6-117 (202)
492 PRK09537 pylS pyrolysyl-tRNA s 99.2 3.7E-11 8.1E-16 139.3 11.8 123 729-859 206-340 (417)
493 PTZ00326 phenylalanyl-tRNA syn 99.2 1.4E-10 3.1E-15 136.9 14.9 164 711-877 214-460 (494)
494 TIGR01982 UbiB 2-polyprenylphe 99.2 9.5E-11 2.1E-15 140.4 11.8 73 469-544 233-308 (437)
495 cd00738 HGTP_anticodon HGTP an 99.1 2.6E-10 5.7E-15 106.7 11.1 90 1064-1155 1-93 (94)
496 cd00768 class_II_aaRS-like_cor 99.1 2.9E-10 6.3E-15 122.6 12.9 130 729-859 2-141 (211)
497 KOG1266 Protein kinase [Signal 99.1 1.2E-10 2.6E-15 127.4 8.3 245 370-667 81-338 (458)
498 KOG1243 Protein kinase [Genera 99.1 1.3E-09 2.9E-14 130.0 17.4 221 373-670 30-256 (690)
499 PRK04750 ubiB putative ubiquin 99.1 1.2E-10 2.6E-15 141.3 8.9 155 354-545 119-316 (537)
500 cd05151 ChoK Choline Kinase (C 99.1 2.3E-10 4.9E-15 118.9 9.5 127 360-542 3-136 (170)
No 1
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.4e-89 Score=831.69 Aligned_cols=777 Identities=47% Similarity=0.721 Sum_probs=571.9
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+||+++|++++.||+||||.||+|+++.+|+.||||+|+.+. +.....++.+|++.|++|+|||||+||.+|.+....
T Consensus 474 ~SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 474 FSRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 3799999999999999999999999999999999999999886 666778899999999999999999999999986531
Q ss_pred ccC------------CC-------CC-------------------CCCCcccccc---ccc-------------c---cc
Q 001059 430 DFD------------GD-------SM-------------------WGSGTLASST---FSN-------------R---AA 452 (1170)
Q Consensus 430 ~~~------------~~-------~~-------------------~~~g~~~~~~---~~~-------------~---~~ 452 (1170)
.-. +. .+ |+..+..+.+ +.+ . +.
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence 000 00 00 0000000000 000 0 00
Q ss_pred ---------------ccccccccccccc-------ccEEEEEeeccCCcHHHHHHhcCCC--CHHHHHHHHHHHHHHHHH
Q 001059 453 ---------------SSADVTGQENKLE-------STYLYIQMEYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 453 ---------------~~~~~~~~~~~~~-------~~~l~iVmEy~~gsL~~~l~~~~~l--~e~~~~~i~~qI~~gL~y 508 (1170)
++..+...++..+ ..++||.||||+.++.+.+..++.+ ....+|++++||++||+|
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 0000111122222 2789999999998777776666655 488899999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccc--cccccCCCCC-CCCCCccccCcccccCccCCCcccccCCC-
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFP-TDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 584 (1170)
+|++|||||||||.|||+++++.|||+|||+|+.... ....+...+. ...++...+.|+.+||..|+|||++.+..
T Consensus 713 IH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred HHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 9999999999999999999999999999999997431 1111111111 12233344678999999999999998866
Q ss_pred -CCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 -KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 -~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.|+.|+|||||||||+||++||.+.|++...+..++ ++.+|.. +.+..+...++|++||+.||++||||.|+|++
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 699999999999999999999999999999999988 8888877 77777888999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHhcCCCCCccchhhhhcccccchhhhhhhcccccccCCCCCccccccchhhhhhhhHHhHHHHHH
Q 001059 661 ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMF 740 (1170)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f 740 (1170)
.|++....++. ..........+...+.......+.++......+. ...... -.+++.+....+++++.+.+.++|
T Consensus 872 ~llppe~~el~-~~~~h~~~~~~~k~~~~~~~~~~~q~~~~~~n~~--yd~~~~--~~~~~~~~~~~l~~~v~e~~~~if 946 (1351)
T KOG1035|consen 872 ELLPPEESELL-VFLQHLYIEQLGKAYKNLLQLIFEQEVLEVLNHQ--YDLDRL--SYIQYTEINNELREYVVEEVVKIF 946 (1351)
T ss_pred cCCCccchHHH-HHHHHHHHHHHHHHHhchhhHHHHHhhhhhhccc--cccccc--cccccchhHHHHHHHHHHHHHHHH
Confidence 99985433332 2222222222333444444444554444333322 121111 346777888999999999999999
Q ss_pred HHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEecCeEEcCCCCCCCCce
Q 001059 741 RQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRY 820 (1170)
Q Consensus 741 ~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~~ef 820 (1170)
++||+.++.||++.+.........+.+.+.|++|-.+.|-.|++.|+||+++.|...-+|+|.++.|||.+... .++++
T Consensus 947 r~Hga~~l~tpp~~~~~~~~~~~~~~v~~ld~sG~~v~Lp~DLr~pfar~vs~N~~~~~Kry~i~rVyr~~~~~-hP~~~ 1025 (1351)
T KOG1035|consen 947 RKHGAIELETPPLSLRNACAYFSRKAVELLDHSGDVVELPYDLRLPFARYVSRNSVLSFKRYCISRVYRPAIHN-HPKEC 1025 (1351)
T ss_pred HHhcceeccCCccccccccchhccceeeeecCCCCEEEeeccccchHHHHhhhchHHHHHHhhhheeecccccC-CCccc
Confidence 99999999999986665555667889999999999999999999999999999888899999999999987755 88899
Q ss_pred eEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccc
Q 001059 821 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEW 900 (1170)
Q Consensus 821 ~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~ 900 (1170)
+||+++|||...-..|||+|.++.+++...--..++.|+|||..++++++.-+|++++++..+..++...-..+.
T Consensus 1026 ~ec~fDii~~t~sl~~AE~L~vi~Ei~~~~l~~~n~~i~lnH~~LL~Ai~~~~~i~~~~r~~v~~~l~~~~~~r~----- 1100 (1351)
T KOG1035|consen 1026 LECDFDIIGPTTSLTEAELLKVIVEITTEILHEGNCDIHLNHADLLEAILSHCGIPKDQRRKVAELLSDMGSSRP----- 1100 (1351)
T ss_pred cceeeeEecCCCCccHHHHHHHHHHHHHHHhccCceeEEeChHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhccc-----
Confidence 999999999887799999999999999885333469999999999999999999999999998877766432221
Q ss_pred cchHHHHHHHHHHHcCCcHHHHHHHHHHH----HHhcCChhhHHHHHhccCCCChhHHHHHHHH-----HHHHccCcceE
Q 001059 901 KSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNI 971 (1170)
Q Consensus 901 ~~~~~~~~~~~~~~~~l~~~~~~~l~~l~----~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i 971 (1170)
..++. +...-...........+..++ ....|. ...+..++..+.....++ +|++| ++..+|+...+
T Consensus 1101 --~~~~~-~~~~~~~~~~s~~~~~l~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~vr-~L~eLe~~~~~~~~~~i~~~~ 1175 (1351)
T KOG1035|consen 1101 --QRSEK-ELKWVFIRRSSLQLAKLPEFVLNRLFLVAGR-FQALKLIRGKLRADSLVR-ALKELENVVGLLRSLGIEEHV 1175 (1351)
T ss_pred --cHHHH-HHHHhhhhHHHHHhhhhHHHHHhhhhhhhcc-hhhhHHHhhhhhhhHHHH-HHHHHHHHHHHHHHhccccce
Confidence 11111 111000111111111111111 112233 245555555444444455 88888 88889999889
Q ss_pred EEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhh
Q 001059 972 YIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1051 (1170)
Q Consensus 972 ~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~ 1051 (1170)
.|+.++.+....-.|++|.+.+.... .+.+....++.|||||.++.+|++.. .++ -.+|+|... +.-+...
T Consensus 1176 ~i~~g~~~~~~~~~g~~~qi~a~~~~--~~~~~~~~la~GgRyd~~~~~~~~~~---~~~---~p~a~gv~~-~~~~~~~ 1246 (1351)
T KOG1035|consen 1176 HIYVGPTESRHRNGGIQFQITAEIKS--NTSGDPVLLAAGGRYDSLLQEVRDEQ---KMN---LPGAIGVSA-LSTIRQH 1246 (1351)
T ss_pred EEeeccceeEEcCCcEEEEEeecccC--CCcCCceeeecccchHHHHHHhhhhh---hhc---Ccccceehh-hHHHHHh
Confidence 99999777766678899999876543 34455567999999999999998742 122 235777652 2222222
Q ss_pred ccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCC
Q 001059 1052 YPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG 1131 (1170)
Q Consensus 1052 L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~ 1131 (1170)
+..+.........++|+||..+ ...+..++.++++||..||++++.+.+...+..+-+||+..-|.+++++. ++
T Consensus 1247 ~~~~~~~~~~~~~cdvlics~g-~~l~t~~~~l~~~LWs~gI~a~i~~~~s~~~~e~~e~~~~~~i~~iliv~-----n~ 1320 (1351)
T KOG1035|consen 1247 APKDLEPIKTPSSCDVLICSRG-SGLLTQRMELVAKLWSKGIKAEIVPDPSPSLEELTEYANEHEITCILIVT-----NQ 1320 (1351)
T ss_pred hhccccCCCCcccccEEEEecC-CchHHHHHHHHHHHHHcCcccceeeCCCcchHHHHHHHhcCceEEEEEEe-----cc
Confidence 2223333445568899999997 77899999999999999999999999888899999999988888888875 56
Q ss_pred eEEEEEcC--CCcccccchHHHHHHHHHHH
Q 001059 1132 LVKVRHLD--VKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1132 ~v~vk~l~--~~eq~~v~~~~l~~~l~~~l 1159 (1170)
...||... ...+..+-..+|++++.+.+
T Consensus 1321 ~~~vks~~~e~~se~~~~~~elv~f~~~~~ 1350 (1351)
T KOG1035|consen 1321 KEKVKSFELERKSEKVVGRTELVEFLLQAL 1350 (1351)
T ss_pred eeeechhHHhhhhhhhhhHHHHHHHHHHhh
Confidence 66776654 34455566788999887654
No 2
>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3e-75 Score=673.11 Aligned_cols=407 Identities=21% Similarity=0.293 Sum_probs=348.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Ccc---cccceEEEeccCCceeeecCCCCH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
.|+|++|++|.++..+++|+++++++|++|||.+|.||+| .+..+ |+. ..++||.|.|++|+.++||||+|+
T Consensus 6 ~prG~~D~lp~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~laLRpe~Ta 85 (429)
T COG0124 6 RPRGTRDFLPEDMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLALRPELTA 85 (429)
T ss_pred CCCCccccChHHHHHHHHHHHHHHHHHHHcCCEeccCccccchhHhhhccCCcccccccceEEEEeCCCCEEEecccCcH
Confidence 4999999999999999999999999999999999999999 44433 655 679999999999999999999999
Q ss_pred HHHHHHHhCCC---CceeEEEecCeEEcCCCCCCCCc-eeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeC
Q 001059 786 PFIRWAISNQK---SSFKRYEISSVYRRAIGHSPPNR-YLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 786 ~iaR~~~~~~~---~P~r~~Y~g~VfR~e~~~~~~~e-f~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg 861 (1170)
|+||++++|.. .|+|+||+|+|||||+||.||.| |+|+|+|+||.+++.+|||||+|+.++|++||+.+ ++|+||
T Consensus 86 pv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAEvi~l~~~~l~~lGi~~-~~l~iN 164 (429)
T COG0124 86 PVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAEVIALAVEILEALGIGG-FTLEIN 164 (429)
T ss_pred HHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHHHHHHHHHHHHHcCCCc-EEEEEc
Confidence 99999998753 59999999999999999987765 99999999999999999999999999999999997 999999
Q ss_pred cHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHH
Q 001059 862 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 941 (1170)
Q Consensus 862 ~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 941 (1170)
|+++++++++.+|+ +.+..+.+++++++++ + +..+.+........+.+..|- ...+...++++
T Consensus 165 ~~g~l~~~~~~~gi--~~~~~l~~~ldk~~k~-------------~-~~~L~e~~~~r~~~n~lr~ld-~k~~~~~~~~~ 227 (429)
T COG0124 165 SRGILEGRLEYLGI--DQREALLRYLDKLDKI-------------G-KLELDEDSKRRLKTNPLRVLD-SKKDSDQELLK 227 (429)
T ss_pred CcccHHHHHHhhcc--hhHHHHHHHHhhhhhH-------------H-HHHhhhhhhhhhhhchHHHHH-hccchHHHHHh
Confidence 99999999999999 7788999999988742 1 122222222333455555554 23344455555
Q ss_pred HHhccCCC-ChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhh
Q 001059 942 RLRGALPA-DKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1018 (1170)
Q Consensus 942 ~l~~~~~~-~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~ 1018 (1170)
.+..++.. .....+.++++ +|+++|+ .+.+|+++|||||||||+|||++..+.+ .+++||||||||+|+
T Consensus 228 ~ap~i~~~~~~e~~~~~~~v~~~L~~~g~--~~~id~~lvRGLDYYtg~VFE~~~~~~~------~~~sI~gGGRYD~Lv 299 (429)
T COG0124 228 NAPELLDYLDEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG------AQGSVCGGGRYDGLV 299 (429)
T ss_pred ccHHhhhhccHHHHHHHHHHHHHHHHcCC--CEEEccceecchhhccceEEEEEEcCCc------cccceecCccchHHH
Confidence 55555542 33566777777 9999995 4999999999999999999999987643 367899999999999
Q ss_pred hhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEe
Q 001059 1019 HRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFV 1098 (1170)
Q Consensus 1019 ~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~ 1098 (1170)
+.||++ ++||||||+|+|||+.+|...........+++|+|++.+ +....+|+++|++||+.|++|+++
T Consensus 300 ~~~gG~----------~~pavGFaiGveRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~g~~~~~~ 368 (429)
T COG0124 300 EEFGGK----------PTPAVGFAIGVERLILALEEEGKEDPVETRVDVYVVPLG-EDAEPEALKLAQKLRAAGISVEVD 368 (429)
T ss_pred HHhCCC----------CCCceeEehHHHHHHHHHHHcCCCCCcCCCCCEEEEEcC-chhHHHHHHHHHHHHHcCCcEEEE
Confidence 999875 579999999999999998744333334678899999997 555789999999999999999998
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 001059 1099 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1099 ~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
+. .+++++|++||++.|++++||+|++|+++|+|+||||.+|+|..++++++++.+...
T Consensus 369 ~~-~r~~k~q~k~A~~~g~~~~viiGe~E~~~g~v~vKdl~t~eq~~v~~~~~~~~~~~~ 427 (429)
T COG0124 369 YS-GRKLKKQFKYADKLGARFAVILGEDELANGVVTVKDLATGEQEEVPLDELVEELKEL 427 (429)
T ss_pred ec-cccHHHHHHHHHHCCCCEEEEEcchHHhcCCEEEeeCCCCccceecHHHHHHHHHhh
Confidence 87 678999999999999999999999999999999999999999999999999988764
No 3
>KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.6e-74 Score=627.95 Aligned_cols=427 Identities=27% Similarity=0.457 Sum_probs=383.2
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHH
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
-+.|+|++||.|.++.++++|.+.+.++|++||+..|+||+| ++.++ |++ .+.+|.|.|++|+.++||||+|+|
T Consensus 60 lKtPKGTrD~~p~qm~lRe~if~~i~~vFkrhGa~~iDTPVFElkeiL~gKYGEd-skLiYdlkDQGGEl~SLRYDLTVP 138 (518)
T KOG1936|consen 60 LKTPKGTRDFSPEQMALREKIFSTIKEVFKRHGAETIDTPVFELKEILTGKYGED-SKLIYDLKDQGGELCSLRYDLTVP 138 (518)
T ss_pred ecCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeccccchhHHHHHhhhcccc-cceeEehhhcCCcEEEeecccccH
Confidence 367999999999999999999999999999999999999999 77788 555 499999999999999999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCCC---CCCCCceeEeEEEEeCCCCc-ccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAIG---HSPPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~~---~~~~~ef~Q~GvEiiG~~~~-~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+||++++|+-..+++|+++.|||+++| ++|+|||+||+++|.|.-++ .+|+|++.++.++|+.|||.+ |.|++||
T Consensus 139 fARylAmNki~sikRy~iAkVyRRd~P~mtrGR~REFYQcDFDIAG~~d~M~pdaE~lkiv~e~L~~l~Igd-~~iKvNh 217 (518)
T KOG1936|consen 139 FARYLAMNKITSIKRYHIAKVYRRDQPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVVEILSRLGIGD-YGIKVNH 217 (518)
T ss_pred HHHHHHHcccccceeeeEEEEEeccCchhhchhhhhhhccCccccccCCCCCchHHHHHHHHHHHhhcCccc-eEEEecH
Confidence 999999998889999999999999887 46667899999999996554 899999999999999999985 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|+|++..+.++..+|++| |.+|+++++|+..++|++++.++.+.+++ .+.|. .+.+++
T Consensus 218 RkiLdgmf~v~GVp~~~frtICSsIDKLd---------K~pwedVkkEmv~eKGlsee~ad~igeyv-~~~g~-~eL~e~ 286 (518)
T KOG1936|consen 218 RKILDGMFAVCGVPEDKFRTICSSIDKLD---------KMPWEDVKKEMVFEKGLSEEAADRIGEYV-SLKGL-DELLEK 286 (518)
T ss_pred HHHHHHHHHHhCCCHHHhhhHHHhhhhhh---------cCCHHHHHHHHHHhcCCCHHHHHHHHHHh-hhccH-HHHHHH
Confidence 99999999999999999999999999988 78999999999999999999999999999 56665 666677
Q ss_pred Hhc--cCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccC--CCcc---------cccc
Q 001059 943 LRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE--KYPA---------TLVE 1004 (1170)
Q Consensus 943 l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~--~~~~---------~~~~ 1004 (1170)
+.. .+..|+...+++++| +++.+|+.++|.||+|++||||||||+|||++..+. -.|. ..+.
T Consensus 287 l~~d~~l~~n~~a~eal~dlk~Lf~y~~~fg~s~~isfDlSLARGLDYYTGvIyEav~~~~~~~~~a~~~~~~~~~e~~~ 366 (518)
T KOG1936|consen 287 LIADPKLSQNEAAKEALADLKQLFEYLEIFGISERISFDLSLARGLDYYTGVIYEAVLRGLRLICPAGRYDQAGSTEPGG 366 (518)
T ss_pred HhcCCcccccHHHHHHHHHHHHHHHHHHHcCCcceEEeehHHhccchhhhceeeeeeeccccccCcchhhhccccccCCC
Confidence 664 466788899999998 899999999999999999999999999999998651 1111 1234
Q ss_pred cceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCC---CCCCCCCceEEEEEcCCCccHHHH
Q 001059 1005 GTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK---PVRNEAGTSVLVCSRGGGGLLVER 1081 (1170)
Q Consensus 1005 ~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~---~~~~~~~~~vlv~~~~~~~~~~~a 1081 (1170)
.++||+|||||+|+++|+.. +..+|+||+++|++||+.+|++... .......++|+|.... ...+.++
T Consensus 367 vGSvaaGGRYDnLv~mf~~k--------~~~vPcvG~S~GVeRiFsile~r~~~~~~~iR~t~t~V~V~~~~-k~~l~eR 437 (518)
T KOG1936|consen 367 VGSVAAGGRYDNLVGMFDKK--------GDKVPCVGQSVGVERIFSILEQRAATVATKIRTTETQVYVAAAG-KNLLFER 437 (518)
T ss_pred ccccccCcchhhHHHHhccc--------cCcCCccceeehHhHHHHHHHHHHHhhhhccccCceEEEEEecC-CchHHHH
Confidence 46899999999999999643 3468999999999999999973321 2234667889998886 7789999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1082 ~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
+++.+.||..||.++..+..++++.+|+.||++.|||++|++|++|+++|.|+||++.+++...++.++++..|++.++
T Consensus 438 ~k~v~~Lw~agI~aE~~yk~~~~~~~q~~~~e~~~ip~~vi~Ge~El~~G~V~vk~~~~re~~~v~~e~~v~~l~~~l~ 516 (518)
T KOG1936|consen 438 LKVVNALWDAGIKAEYLYKANPKLLKQFQYAEEAGIPLAVILGEEELADGSVKVKNVGTREEVLVKREQFVSELKDLLS 516 (518)
T ss_pred HHHHHHHHhcCcchhhhhhcCccHHHHHHHHHhcCCCeEEEechhhhcCCeEEEEecccccceeccHHHHHHHHHHHhc
Confidence 9999999999999999998889999999999999999999999999999999999999999999999999999998875
No 4
>PLN02972 Histidyl-tRNA synthetase
Probab=100.00 E-value=1.5e-71 Score=672.58 Aligned_cols=418 Identities=25% Similarity=0.404 Sum_probs=366.9
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCH
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
+-+.|+|++|++|.++..+++|++.++++|++|||.+|+||+| .+.++ +++ .++||+|.|++|+.++||||+|+
T Consensus 326 ~~k~PkGtrD~lP~e~~~re~I~~~L~~vFk~hGy~eI~TPvfE~~Ell~~k~Ged-~k~mY~f~D~gGr~LaLRPDlTv 404 (763)
T PLN02972 326 LPKIPKGTRDFAKEQMAIREKAFSIITSVFKRHGATALDTPVFELRETLMGKYGED-SKLIYDLADQGGELCSLRYDLTV 404 (763)
T ss_pred ccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCEEccCCcccchHHhhcccCcc-hhheEEEECCCCCEEEeCCCChH
Confidence 3388999999999999999999999999999999999999999 34444 444 57899999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCC-CcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 786 PFIRWAISNQKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 786 ~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~-~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
|+||++++|...|+|+||+|+|||+++|+.++ |||+|+|+||||.. +..+|+|||.++.++|+.||+.+ ++|+|||+
T Consensus 405 PiAR~vA~n~~~p~KrYyiG~VFR~e~pqkGR~REF~Q~G~EIIG~~~~~~aDAEVI~La~E~L~~LGi~d-f~I~INh~ 483 (763)
T PLN02972 405 PFARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMGPDFEIIKVLTELLDELDIGT-YEVKLNHR 483 (763)
T ss_pred HHHHHHHhCCCCcceEEEeccEEecCCCCCCCCccceEEeEEEEcCCCcchhhHHHHHHHHHHHHhCCCCc-eEEEeCCH
Confidence 99999999877799999999999999988665 46999999999985 45789999999999999999985 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++++++.+|++++.++.++.++++++ +.++++++++++...+++++.++.|..++ .+.|++.++++.+
T Consensus 484 ~iL~~ILe~lgi~~e~~~~v~~aIdkld---------k~~le~vk~eL~~~~gLs~e~~~~L~~L~-~L~G~~~evLd~L 553 (763)
T PLN02972 484 KLLDGMLEICGVPPEKFRTICSSIDKLD---------KQSFEQVKKEMVEEKGLSNETADKIGNFV-KERGPPLELLSKL 553 (763)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhh---------hhhHHHHHHHHhhhcCCCHHHHHHHHHHH-HhcCCHHHHHHHH
Confidence 9999999999999999899989999887 56778888888888899999999999998 6888878888888
Q ss_pred hcc---CCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 944 RGA---LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 944 ~~~---~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
+.. +..++...+++++| ++..+|+.+++.||++++||++||||+|||+|..+.+ .++||+|||||
T Consensus 554 ~~~~~~l~~~~~~~~aL~eL~~L~~~L~~~gv~~~I~fDlsLvRGLDYYTGiVFE~~~~g~~-------~gsIagGGRYD 626 (763)
T PLN02972 554 RQEGSEFLGNASSRAALDELEIMFKALEKSKAIGKIVFDLSLARGLDYYTGVIYEAVFKGAQ-------VGSIAAGGRYD 626 (763)
T ss_pred HHhhHhhccChHHHHHHHHHHHHHHHHHhcCCCccEEECCcccCCCcccCceEEEEEEcCCc-------cceeeecCCch
Confidence 753 34566677788887 7788898888999999999999999999999986522 14799999999
Q ss_pred hhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCC-C--CCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcC
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK-P--VRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~-~--~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~G 1092 (1170)
+|+++||++ ++||||||||+|||+.+|.+... . .....+++|+|++.+ ++.+.+++++++.||+.|
T Consensus 627 ~Lv~~FgG~----------~vPAVGFSiGIERL~~~L~~~~~~~~~~~~~~~~dVlV~s~g-~~~l~~alkia~~LR~aG 695 (763)
T PLN02972 627 NLVGMFSGK----------QVPAVGVSLGIERVFAIMEQQEEEKSQVIRPTETEVLVSIIG-DDKLALAAELVSELWNAG 695 (763)
T ss_pred hHHHhcCCC----------CCCEEEEEecHHHHHHHHHHcccCCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHHCC
Confidence 999999653 47999999999999988863221 1 112345789999985 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1093 i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
|+|++.. .++++++++||++.||+++||+|++|+++|+|+||||.+++|..|++++++++|++.|.
T Consensus 696 I~aE~~~--~~kl~kq~~~A~k~gi~~vVIIGe~E~~~g~VkVKnL~tgeq~~V~~delv~~l~~~l~ 761 (763)
T PLN02972 696 IKAEYKV--STRKAKHLKRAKESGIPWMVLVGEKELSKGFVKLKNLEAGVEEEVDRTCFVQELKAELL 761 (763)
T ss_pred CEEEEeC--CCCHHHHHHHHHHCCCCEEEEECchHHhCCeEEEEECCCCcceEeeHHHHHHHHHHHhc
Confidence 9999644 46899999999999999999999999999999999999999999999999999988775
No 5
>PLN02530 histidine-tRNA ligase
Probab=100.00 E-value=2e-67 Score=632.61 Aligned_cols=404 Identities=18% Similarity=0.227 Sum_probs=344.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..|+|++|++|.++.++++|++.++++|++|||++|.||+| .+..+ |+...++||+|.|++|+.++||||+|+|+
T Consensus 71 ~~p~G~~D~lp~~~~~~~~i~~~~~~~~~~~Gy~~I~tP~lE~~el~~~~~g~~~~~~~y~f~D~~g~~l~LRpD~T~~i 150 (487)
T PLN02530 71 NPPKGTRDFPPEDMRLRNWLFDHFREVSRLFGFEEVDAPVLESEELYIRKAGEEITDQLYNFEDKGGRRVALRPELTPSL 150 (487)
T ss_pred CCCCCcCcCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHhccccCcccccceEEEECCCCCEEecCCCCcHHH
Confidence 56999999999999999999999999999999999999999 44444 77788999999999999999999999999
Q ss_pred HHHHHhCC---CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCc-ceEEEeCc
Q 001059 788 IRWAISNQ---KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCDIHLNH 862 (1170)
Q Consensus 788 aR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~-~~~i~lg~ 862 (1170)
||+++++. ..|+|+||+|+|||+++++.++ |||+|+|+|+||.+++.+|+|+|+++.++|+.||+++ +++|+|||
T Consensus 151 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~q~gr~REf~Q~giEiiG~~~~~aDaEvi~l~~~~l~~lgl~~~~~~i~i~~ 230 (487)
T PLN02530 151 ARLVLQKGKSLSLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVPGVEAEAELLAAIVTFFKRVGITSSDVGIKVSS 230 (487)
T ss_pred HHHHHhcccccCCCeEEEEEcCEEcCcCCCCCCccceEEcCeeEeCCCCcchhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 99999864 3599999999999999988765 5799999999999999999999999999999999962 49999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.++++++.+..++.+++++++ .+.+++++. +...+++.+.++.+..++. +. .+++
T Consensus 231 ~~i~~~~l~~~~~~~~~~~~v~~~~d~l~k---------~~~~~l~~~-L~~~~~~~~~~~~l~~l~~-~~-----~~~~ 294 (487)
T PLN02530 231 RKVLQAVLKSYGIPEESFAPVCVIVDKLEK---------LPREEIEKE-LDTLGVSEEAIEGILDVLS-LK-----SLDD 294 (487)
T ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHhhhh---------ccHHHHHHH-HHHcCCCHHHHHHHHHHHh-cc-----CHHH
Confidence 999999999999999888888888888773 445566554 5668888888888877773 22 3445
Q ss_pred HhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhh
Q 001059 943 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1020 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~ 1020 (1170)
+...+.......+.|+++ +++.+|+.+++.||++++||++||||+|||+|... +.+++||+|||||+|++.
T Consensus 295 l~~~~~~~~~~l~~L~~l~~~l~~~g~~~~i~~Dl~lvrgldYYTGivFe~~~~~-------~~~~~I~gGGRYD~Li~~ 367 (487)
T PLN02530 295 LEALLGADSEAVADLKQLFSLAEAYGYQDWLVFDASVVRGLAYYTGIVFEGFDRA-------GKLRAICGGGRYDRLLST 367 (487)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHcCCCccEEEecccccCccccCceEEEEEecC-------CCcceeeecccHHHHHHH
Confidence 555443222344555555 88899998889999999999999999999999742 123479999999999999
Q ss_pred cccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1021 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1021 fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
||+. ++||||||+|++||+.++++....+....+.+++|++.+ ++...+|+++|++||+.|++|+++..
T Consensus 368 fgg~----------~~pAvGFa~g~~~l~~~l~~~g~~p~~~~~~dVlVi~~~-~~~~~~A~~ia~~LR~~Gi~vevd~~ 436 (487)
T PLN02530 368 FGGE----------DTPACGFGFGDAVIVELLKEKGLLPELPHQVDDVVFALD-EDLQGAAAGVASRLREKGRSVDLVLE 436 (487)
T ss_pred hCCC----------CCCeeEEEEhHHHHHHHHHhcCCCCCCCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9754 469999999999999887643222222356789999985 66788999999999999999998877
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l 1151 (1170)
+++++++++||++.|+++++++|++|.++|+|+||||.+++|..|+++++
T Consensus 437 -~~~l~k~ik~A~k~g~~~iviiG~~E~~~~~V~vK~l~sgeq~~v~~~el 486 (487)
T PLN02530 437 -PKKLKWVFKHAERIGAKRLVLVGASEWERGMVRVKDLSSGEQTEVKLDEL 486 (487)
T ss_pred -CCCHHHHHHHHHHCCCCEEEEEchhHHhCCeEEEEECCCCcceEechHHc
Confidence 57899999999999999999999999999999999999999999998775
No 6
>PRK12420 histidyl-tRNA synthetase; Provisional
Probab=100.00 E-value=7.1e-65 Score=603.64 Aligned_cols=402 Identities=21% Similarity=0.337 Sum_probs=342.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccCCceeeecCCCCH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
+.|+|++|++|.++.++++++++++++|++|||++|.||+| .+.. .++...++||+|+|++|+.|+||||+|+
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~~~~~~~~~~~~~~~~~~~~~~D~~g~~l~LRpD~T~ 84 (423)
T PRK12420 5 RNVKGTKDYLPEEQVLRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALRYDLTI 84 (423)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHHhcccCCCcccccceEEEecCCCceecccccccH
Confidence 36999999999999999999999999999999999999999 3332 2466778999999999999999999999
Q ss_pred HHHHHHHhCC--CCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 786 PFIRWAISNQ--KSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 786 ~iaR~~~~~~--~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
|+||+++++. ..|+|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|||+++.++|+.||+ + ++|+|||
T Consensus 85 ~iaR~va~~~~~~~p~r~~y~g~vfR~~~~~~gr~rE~~Q~g~EiiG~~~~~adaEvi~la~~~l~~lg~-~-~~i~l~~ 162 (423)
T PRK12420 85 PFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEAELMSMAFELFRRLNL-E-VTIQYNN 162 (423)
T ss_pred HHHHHHHhCcCCCCCeeEEEEcceECCCCCCCCccceeEECCeeeECCCCCcccHHHHHHHHHHHHHCCC-C-EEEEEcC
Confidence 9999999864 45999999999999988765 4567999999999999999999999999999999999 4 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|++++.++.+..++++++ +.+++++++.+ .+.+++.+.++.+..++ ..++ ...++.
T Consensus 163 ~~l~~~il~~~~~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l-~~~~l~~~~~~~l~~l~-~~~~--~~~~~~ 229 (423)
T PRK12420 163 RKLLNGILQAIGIPTELTSDVILSLDKIE---------KIGIDGVRKDL-LERGISEEMADTICNTV-LSCL--QLSIAD 229 (423)
T ss_pred HHHHHHHHHHcCCChhhhhchhhheechh---------hcCHHHHHHHH-HHcCCCHHHHHHHHHHH-hccC--hhhHHH
Confidence 99999999999999988888877666655 34456665444 45789999999999988 4554 345666
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 943 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
++..+ .++.+.+++++| .++.+|+..++.||++++|+++||||+|||+|..+.+ ...+||+|||||+|
T Consensus 230 ~~~~~-~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~Dl~~vr~l~YYtG~vFe~~~~~~~------~~~~i~~GGRYD~L 302 (423)
T PRK12420 230 FKEAF-NNPLVAEGVNELQQLQQYLIALGINENCIFNPFLARGLTMYTGTVYEIFLKDGS------ITSSIGSGGRYDNI 302 (423)
T ss_pred HHHhc-cCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccCCCcccceeEEEEEecCCC------ccccccCCccHHHH
Confidence 76533 455666666666 7888899888999999999999999999999987532 12469999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH-cCCeEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE-ENIKAQ 1096 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~-~Gi~v~ 1096 (1170)
+++||+. +.++||||||+++|||+.++..... ...+.+|+|++.+ + ...|+++|++||+ .|++|+
T Consensus 303 ~~~f~~~--------~~~~pAvGfa~~~~~l~~~l~~~~~---~~~~~dvlI~~~~-~--~~~a~~ia~~Lr~~~Gi~ve 368 (423)
T PRK12420 303 IGAFRGD--------DMNYPTVGISFGLDVIYTALSQKET---ISSTADVFIIPLG-T--ELQCLQIAQQLRSTTGLKVE 368 (423)
T ss_pred HHHhCCC--------CCCCCceeEEEcHHHHHHHHHhcCC---CCCCceEEEEEcC-C--HHHHHHHHHHHHhhcCCeEE
Confidence 9999652 2357999999999999988763221 2246799999974 3 3579999999999 999999
Q ss_pred EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 001059 1097 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151 (1170)
Q Consensus 1097 ~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l 1151 (1170)
++.. .+++++++++|++.|+++++++|++|.++++|+||++.+++|..++++++
T Consensus 369 ~~~~-~~~l~~~i~~A~~~g~~~iviig~~e~~~~~v~vr~~~~~~~~~v~~~~~ 422 (423)
T PRK12420 369 LELA-GRKLKKALNYANKENIPYVLIIGEEEVSTGTVMLRNMKEGSEVKVPLSSL 422 (423)
T ss_pred EecC-CcCHHHHHHHHHHcCCCEEEEEChhHHhcCeEEEEECCCCceeeeeHHHc
Confidence 8887 67899999999999999999999999999999999999999999998875
No 7
>CHL00201 syh histidine-tRNA synthetase; Provisional
Probab=100.00 E-value=3.7e-63 Score=588.12 Aligned_cols=402 Identities=15% Similarity=0.164 Sum_probs=312.0
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Ccc---cccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T 784 (1170)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++..+ |+. ..++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~D~lp~~~~~~~~i~~~i~~~~~~~Gy~~I~TP~~E~~e~~~~~~G~~~~~~~~~my~~~d~~g~~l~LRpd~T 84 (430)
T CHL00201 5 QAIRGTKDILPDEINYWQFIHDKALTLLSLANYSEIRTPIFENSSLYDRGIGETTDIVNKEMYRFTDRSNRDITLRPEGT 84 (430)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeecCcccchHHHHhcccCCcccccccceEEEEcCCCCEEEeCCCCc
Confidence 46999999999999999999999999999999999999999 33333 433 45899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 785 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+||+++++. ..|+|+||+|+|||+|+||.||. ||+|+|+|+||..++.+|+|+|.++.++|+.||+++ ++|+
T Consensus 85 ~~iaR~~~~~~~~~~~~p~R~~y~g~vfR~e~~q~GR~Ref~Q~g~EiiG~~~~~aD~Evi~l~~~~l~~lGl~~-~~i~ 163 (430)
T CHL00201 85 AGIVRAFIENKMDYHSNLQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSIDARADTEVIHLAMQIFNELQVKN-LILD 163 (430)
T ss_pred HHHHHHHHHccccccCCCeEEEEEcceecCCCCcCCccceeEEeceEEECCCChhhHHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999987753 24899999999999999886654 699999999999999999999999999999999986 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH----HHhcCC
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGA 935 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~----~~~~g~ 935 (1170)
|||++++... ....+.+..++.... ..++....+.+..++ ......
T Consensus 164 l~~~~~~~~~-------~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~l~~~~~~~l~~k~~~ 213 (430)
T CHL00201 164 INSIGKLEDR-------QSYQLKLVEYLSQYQ-----------------------DDLDTDSQNRLYSNPIRILDSKNLK 213 (430)
T ss_pred ECCCCchhhH-------HHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHhhhHHHhhccCcc
Confidence 9999887631 011122222222210 001111111111111 000001
Q ss_pred hhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccc
Q 001059 936 ADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012 (1170)
Q Consensus 936 ~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GG 1012 (1170)
..++++.+..+.. .+....+.|.++ .++.+|+ .+.||++++||++||||+|||+|+...+ ..++|||||
T Consensus 214 ~~~~~~~a~~l~~~~~~~~~~~l~~~~~~l~~~g~--~~~~Dl~lvRgldYYTG~vFE~~~~~~~------~~~~i~gGG 285 (430)
T CHL00201 214 TQEILDGAPKISDFLSLESTEHFYDVCTYLNLLNI--PYKINYKLVRGLDYYNDTAFEIKTLSSN------GQDTICGGG 285 (430)
T ss_pred HHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHcCC--cEEECcccccCCccccccEEEEEECCCC------Ccceeeecc
Confidence 1122222222111 122344455555 6677787 4999999999999999999999985422 234799999
Q ss_pred ccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcC
Q 001059 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092 (1170)
Q Consensus 1013 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~G 1092 (1170)
|||+|+++||+. +.||||||+|+|||+.+|.+... .+..+.+|+|++.+ +....+|++++++||++|
T Consensus 286 RYD~L~~~fg~~----------~~PavGfa~g~erl~~~l~~~~~--~~~~~~~v~v~~~~-~~~~~~a~~ia~~LR~~G 352 (430)
T CHL00201 286 RYDSLIHQLGGP----------KTPAVGCAIGLERLLLIAKDNII--LPKQSIDVYIATQG-LKAQKKGWEIIQFLEKQN 352 (430)
T ss_pred chHHHHHHhCCC----------CCCeeEEEecHHHHHHHHhcccc--CCCCCCCEEEEEcC-HHHHHHHHHHHHHHHhCC
Confidence 999999999754 46999999999999998865322 12345689999875 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhhccCCC
Q 001059 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPS 1167 (1170)
Q Consensus 1093 i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~~~~ 1167 (1170)
++|+++.. .+++++++++|++.|+++++++|++|.++++|+||||.+++|.+++++++++.+.++.+...-|.+
T Consensus 353 i~veid~~-~~~l~k~~k~A~~~~~~~viiiG~~E~~~~~vtvk~l~~~~q~~i~~~~~~~~~~~~~~~~~~~~~ 426 (430)
T CHL00201 353 IKFELDLS-SSNFHKQIKQAGKKRAKACIILGDNEIMDNCITIKWLDEQVQENAQYSNFKQEISYLKKKIAFNKK 426 (430)
T ss_pred CeEEEeeC-CCCHHHHHHHHHHcCCCEEEEEechHHhCCcEEEEECCCCCcEEEcHHHHHHHHHHHHHhhhhhhc
Confidence 99998876 578999999999999999999999999999999999999999999999999999888766555544
No 8
>PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=2.1e-60 Score=558.89 Aligned_cols=360 Identities=21% Similarity=0.267 Sum_probs=308.2
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEecc-CCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 786 (1170)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|+ +|+.++||||+|+|
T Consensus 4 ~~p~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~e~~~~~~g~~~~~~~~~f~d~~~g~~l~LRpD~T~~ 83 (391)
T PRK12292 4 QLPEGIRDLLPEEARKIEEIRRRLLDLFRRWGYEEVITPTLEYLDTLLAGGGAILDLRTFKLVDQLSGRTLGLRPDMTAQ 83 (391)
T ss_pred CCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCceeeCcchhhHHHHhccCCccchhhhEEEeecCCCCEEEECCCCcHH
Confidence 46999999999999999999999999999999999999999 33333 56778999999999 89999999999999
Q ss_pred HHHHHHhCC---CCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 787 FIRWAISNQ---KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 787 iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+||+++++. ..|+|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|||.++.++|+.+|+.+ +.|+|||
T Consensus 84 iaR~~a~~~~~~~~p~r~~y~g~vfR~~~~~~gr~ref~Q~g~EiiG~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~ 162 (391)
T PRK12292 84 IARIAATRLANRPGPLRLCYAGNVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALKALGLPN-FTLDLGH 162 (391)
T ss_pred HHHHHHHhccCCCCCeEEEeeceeeecCCCcCCCccchhccceEEeCCCCchHHHHHHHHHHHHHHHcCCCC-eEEEecc
Confidence 999998863 459999999999999988865 55799999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|+++++++.++.+++++|+ .+. +++.. +++.+.++.+..++ .+.| ..++++.
T Consensus 163 ~~i~~~il~~~~~~~~~~~~l~~~l~~~~~---------~~~----~~~~~--~l~~~~~~~l~~l~-~~~g-~~~~l~~ 225 (391)
T PRK12292 163 VGLFRALLEAAGLSEELEEVLRRALANKDY---------VAL----EELVL--DLSEELRDALLALP-RLRG-GREVLEE 225 (391)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCH---------HHH----HHHHh--cCCHHHHHHHHHHH-HhcC-CHHHHHH
Confidence 999999999999999999999999998873 222 22222 67888888899998 5677 5788888
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 943 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
++.+.. +..+.+++++| .+..+|+..++.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 226 ~~~~~~-~~~~~~~l~~L~~l~~~l~~~~~~~~i~~D~~lvrgl~YYtG~vFe~~~~~~~~--------~i~~GGRYD~L 296 (391)
T PRK12292 226 ARKLLP-SLPIKRALDELEALAEALEKYGYGIPLSLDLGLLRHLDYYTGIVFEGYVDGVGN--------PIASGGRYDDL 296 (391)
T ss_pred HHHhcc-ChHHHHHHHHHHHHHHHHHHhCCCceEEEehhhccCCcCccceEEEEEECCCCC--------cccCCcchhhH
Confidence 887544 55556677777 77777887889999999999999999999999976554 59999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1097 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~ 1097 (1170)
+++||. ++||||||+++|||+.+ . . .....+.+++|+..+ +....+|++++++||+.|++|++
T Consensus 297 ~~~fg~-----------~~pAvGfai~ldrl~~~-~-~---~~~~~~~~~~v~~~~-~~~~~~a~~~~~~Lr~~G~~~~~ 359 (391)
T PRK12292 297 LGRFGR-----------ARPATGFSLDLDRLLEL-Q-L---ELPVEARKDLVIAPD-SEALAAALAAAQELRKKGEIVVL 359 (391)
T ss_pred HHHcCC-----------CCCCceEEeeHHHHHhh-c-c---ccccccCCcEEEEeC-cccHHHHHHHHHHHHHcCCEEEE
Confidence 998853 36999999999999874 1 1 112234466777764 56788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCC
Q 001059 1098 VPVPDPSLTEQYEYASEHDI 1117 (1170)
Q Consensus 1098 ~~~~~~~l~k~~~~A~~~gi 1117 (1170)
... .+++++++++|++.|+
T Consensus 360 ~~~-~~~~~~~~~~a~~~~~ 378 (391)
T PRK12292 360 ALP-GRNFEDAREYARDRQI 378 (391)
T ss_pred ecC-CCChHHHHHHHhhcCe
Confidence 876 5789999999999998
No 9
>PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=4.7e-58 Score=536.76 Aligned_cols=362 Identities=18% Similarity=0.211 Sum_probs=301.4
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEecc-CCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 786 (1170)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++..++.||+|.|+ +|+.++||||+|+|
T Consensus 8 ~~p~G~rD~lp~e~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~e~~~~~~g~~~~~~~y~f~D~~~g~~l~LRpD~T~~ 87 (392)
T PRK12421 8 LLPDGVADVLPEEAQKIERLRRRLLDLFASRGYQLVMPPLIEYLESLLTGAGQDLKLQTFKLIDQLSGRLMGVRADITPQ 87 (392)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeCcchhhHHHHhccCCccchhceEEEEcCCCCcEEEECCcCCHH
Confidence 46999999999999999999999999999999999999999 34344 77778899999999 69999999999999
Q ss_pred HHHHHHhC--CCCceeEEEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 787 FIRWAISN--QKSSFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 787 iaR~~~~~--~~~P~r~~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
|||+++++ ...|+|+||+|+|||+++++ ++.+||+|+|+|+||.+++.+|+|||.++.++|++||+++ ++|+|||+
T Consensus 88 iaR~~a~~~~~~~p~R~~Y~g~VfR~~~~~~gr~rEf~Q~GvEiiG~~~~~aDaEvi~l~~e~l~~lgi~~-~~l~ig~~ 166 (392)
T PRK12421 88 VARIDAHLLNREGVARLCYAGSVLHTLPQGLFGSRTPLQLGAELYGHAGIEADLEIIRLMLGLLRNAGVPA-LHLDLGHV 166 (392)
T ss_pred HHHHHHhhcCCCCceEEEEeeeEEEcCCCcCCCcCccceeceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCH
Confidence 99998875 34699999999999998877 4556799999999999999999999999999999999985 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++++++.+|++++.++.+.++++++++. . + .+++...+++...++.+..++ .+.|+. +.++.+
T Consensus 167 ~i~~~il~~l~l~~~~~~~l~~~l~kk~~~---------~---l-~~~~~~~~~~~~~~~~l~~L~-~~~g~~-~~l~~~ 231 (392)
T PRK12421 167 GIFRRLAELAGLSPEEEEELFDLLQRKALP---------E---L-AEVCQNLGVGSDLRRMFYALA-RLNGGL-EALDRA 231 (392)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCHH---------H---H-HHHHHhcCCCHHHHHHHHHHH-HhcCCH-HHHHHH
Confidence 999999999999999999999999988732 1 1 344555678888888899988 566754 566665
Q ss_pred hccCC-CChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 944 RGALP-ADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 944 ~~~~~-~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
.+.+. .++.+.+++++| .+..++....+.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~l~~~l~~~~~~~~~~~DlslvrgldYYTG~vFe~~~~~~~~--------~i~~GGRYD~L 303 (392)
T PRK12421 232 LSVLALQDAAIRQALDELKTLAAHLKNRWPELPVSIDLAELRGYHYHTGLVFAAYIPGRGQ--------ALARGGRYDGI 303 (392)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHhhCCCceEEEeeccccCCCCcCCCEEEEEECCCCC--------cccCCCCccch
Confidence 55444 567788888888 45555445569999999999999999999999976543 69999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1097 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~ 1097 (1170)
+++||. +.||||||+|+|||+.++... . ..++++++.+ +. ..++++|++||+.|++|++
T Consensus 304 ~~~fg~-----------~~pAvGfai~lerL~~~l~~~-----~--~~~~~~~~~~-~~--~~~~~~a~~LR~~G~~~~~ 362 (392)
T PRK12421 304 GEAFGR-----------ARPATGFSMDLKELLALQFLE-----E--EAGAILAPWG-DD--PDLLAAIAELRQQGERVVQ 362 (392)
T ss_pred hHhhCC-----------CCCCceEEeeHHHHHhhcccc-----c--CCceEEeecC-Cc--HHHHHHHHHHHhCCCEEEE
Confidence 998864 369999999999999876421 1 1266777764 32 5688999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCC
Q 001059 1098 VPVPDPSLTEQYEYASEHDIKCLVILTDT 1126 (1170)
Q Consensus 1098 ~~~~~~~l~k~~~~A~~~gi~~~iiig~~ 1126 (1170)
.+.. .-.+| +.++...++++++
T Consensus 363 ~~~~------~~~~~-~~~~~~~~~~~~~ 384 (392)
T PRK12421 363 LLPG------DDGSS-EPGCDHRLVLQDG 384 (392)
T ss_pred eCCC------cchhH-HhCCCeEEEEECC
Confidence 7652 22345 6699999998854
No 10
>TIGR00442 hisS histidyl-tRNA synthetase. This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff.
Probab=100.00 E-value=9.6e-57 Score=531.61 Aligned_cols=380 Identities=21% Similarity=0.281 Sum_probs=309.2
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Ccc---cccceEEEeccCCceeeecCCCCH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
.|+|++|++|.++..++++++.++++|.+|||++|.||+| .+... ++. ..++||+|.|++|+.++||||+|+
T Consensus 2 ~p~G~~d~~p~~~~~~~~i~~~i~~~f~~~Gy~~i~~P~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 81 (397)
T TIGR00442 2 APRGTRDFLPEEMIKWQYIEETIREVFELYGFKEIRTPIFEYTELFARKVGEETDIVEKEMYTFKDKGGRSLTLRPEGTA 81 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHHHcCCeEecCcccchHHHhhhccCccccccccceEEEECCCCCEEeecCCCcH
Confidence 5899999999999999999999999999999999999999 33332 232 458999999999999999999999
Q ss_pred HHHHHHHhCC---CCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeC
Q 001059 786 PFIRWAISNQ---KSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 786 ~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg 861 (1170)
|+||+++++. ..|+|+||+|+|||+++++. +.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ ++|+||
T Consensus 82 ~iaR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~ref~Q~g~eiig~~~~~~d~E~i~l~~e~l~~lg~~~-~~i~i~ 160 (397)
T TIGR00442 82 PVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEIIALAAEILKELGIKD-FTLEIN 160 (397)
T ss_pred HHHHHHHhcccccCCCeEEEEEcCeecCCCCCCCcccceEEcCeeeeCCCCHHHHHHHHHHHHHHHHHcCCCc-eEEEec
Confidence 9999998863 35999999999999987764 456799999999999999999999999999999999975 999999
Q ss_pred cHHHHHHHHHHhCCCHHHHHHHHHHHHH-hcCCCCCcccccchHHHHHHHHHHH-cCCcHHHHHHHHHHHHHhcCChhhH
Q 001059 862 HGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQE-LNLAEAVVNRLQTVGLRFCGAADQA 939 (1170)
Q Consensus 862 ~~~il~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~l~~l~~~~~g~~~~~ 939 (1170)
|+++++++++ .+..+..++++ +|++. .+.+ .+++.. .++..+..+.+..++. . . ..+
T Consensus 161 ~~~i~~~~~~-------~~~~l~~~l~~~~~~~~---------~~~~-~~l~~~~~~~~~~~~~~~~~~~~-~--~-~~~ 219 (397)
T TIGR00442 161 SLGILEGRLE-------YREALLRYLDKHLDKLG---------EDSV-RRLEKNPLRILDSKNEKIQELLK-E--A-PKI 219 (397)
T ss_pred CcccHHHHHH-------HHHHHHHHHHHhHhhcC---------HHHH-HHHhhccccCchhhhHHHHHHHh-c--C-HHH
Confidence 9999999987 36777788887 56432 2222 223322 3455555666666652 1 1 122
Q ss_pred HHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 940 LPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 940 l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
+..+ +....+.|+++ .++.+|+ .+.|||+++|+++||||+||++|..+.+. ..+||+|||||+|
T Consensus 220 ~~~~------~~~~~~~l~~l~~~l~~~~~--~i~~dl~~~r~~~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 285 (397)
T TIGR00442 220 LDFL------DEESRAHFEELKELLDALGI--PYKIDPSLVRGLDYYTGTVFEFVTDELGA------QGTICGGGRYDGL 285 (397)
T ss_pred HHHh------hHHHHHHHHHHHHHHHHcCC--CEEECCccccCchhhcceEEEEEECCCCc------cceeeeccchHHH
Confidence 2221 23455555655 7777888 39999999999999999999999875431 2479999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1097 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~ 1097 (1170)
+++||+. +.||||||+++|||+.++...........+.+++|++.+ ++...++++++.+||+.|++|++
T Consensus 286 ~~~f~~~----------~~~avGfs~~~~~l~~~l~~~~~~~~~~~~~~vlV~~~~-~~~~~~~~~i~~~Lr~~gi~v~~ 354 (397)
T TIGR00442 286 VEELGGP----------PTPAVGFAIGIERLLLLLEELGLEPPEESSPDVYVVPLG-EEAELEALKLAQKLRKAGIRVEV 354 (397)
T ss_pred HHHhCCC----------CCceEEeeecHHHHHHHHHhcCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHhCCCeEEE
Confidence 9999653 369999999999999888643222223456789999875 66788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 001059 1098 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1141 (1170)
Q Consensus 1098 ~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~ 1141 (1170)
.+. .+++++++++|++.|++++|++|++|.+.++|+|||+.+|
T Consensus 355 ~~~-~~~l~k~~~~a~~~g~~~~i~ig~~e~~~~~v~vrnl~~~ 397 (397)
T TIGR00442 355 DLG-GRKLKKQLKYADKLGARFAVILGEDELANGTVTLKDLETG 397 (397)
T ss_pred eCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEeCCCC
Confidence 776 5789999999999999999999999999999999999875
No 11
>PRK00037 hisS histidyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=2.1e-56 Score=531.51 Aligned_cols=381 Identities=19% Similarity=0.283 Sum_probs=300.5
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cccc---ccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQF---KRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~---~~~my~f~D~~G~~laLRPD~T 784 (1170)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++... ++.. .++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~i~~~~~~~Gy~ei~tP~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpd~T 84 (412)
T PRK00037 5 QAPRGTRDILPEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKVGEETDIVEKEMYTFQDKGGRSLTLRPEGT 84 (412)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEeeccccchHHHhccccCcccccccceeEEEEcCCCCEEEecCCCc
Confidence 47899999999999999999999999999999999999999 33333 3333 6899999999999999999999
Q ss_pred HHHHHHHHhCCCCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc-
Q 001059 785 LPFIRWAISNQKSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH- 862 (1170)
Q Consensus 785 ~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~- 862 (1170)
+|+||+++++...|+|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ +.+.|||
T Consensus 85 ~~~ar~~~~~~~~p~r~~~~g~vfR~e~~~~gr~ref~Q~g~ei~g~~~~~~d~E~i~~~~~~l~~lg~~~-~~~~l~~~ 163 (412)
T PRK00037 85 APVVRAVIEHKLQPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEVIALAADILKALGLKG-LKLLINSL 163 (412)
T ss_pred HHHHHHHHhCCCCCeEEEEEcCccccCCCCCCcccceEEcCeeeeCCCCcchhHHHHHHHHHHHHHcCCCc-eeeeeccC
Confidence 9999999987668999999999999987664 456799999999999999999999999999999999985 7776554
Q ss_pred ---------HHHHHHHHHHhCCCH---HHHHHH-HHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 001059 863 ---------GDLLEAIWSWAGIKA---EHREKV-AELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929 (1170)
Q Consensus 863 ---------~~il~~~l~~lgl~~---~~~~~l-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 929 (1170)
+++++++++. ++++ +..+.+ ..++...++ .. .
T Consensus 164 ~~~~~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~----------------------~~--~---------- 208 (412)
T PRK00037 164 GDFEIRANYRKALVGFLEK-GLDELDEDSKRRLETNPLRILDK----------------------KD--K---------- 208 (412)
T ss_pred CCHHHhHHHHHHHHHHHHh-CchhhchHHHHHHhhCchhhhcc----------------------cc--h----------
Confidence 4555555554 3332 000000 000001110 00 0
Q ss_pred HHhcCChhhHHHHHhccC-CCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccc
Q 001059 930 LRFCGAADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006 (1170)
Q Consensus 930 ~~~~g~~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~ 1006 (1170)
+. ...++.+..+. ..+....+++++| +++.+|+ ++.||++++||++||||+|||+|..+.+. .+
T Consensus 209 ----~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~i~~Dl~~~r~l~YYtG~vFe~~~~~~g~------~~ 275 (412)
T PRK00037 209 ----ED-QELLKDAPKLLDYLDEESKEHFEELKELLDALGI--PYVIDPRLVRGLDYYTGTVFEFVTDDLGA------QG 275 (412)
T ss_pred ----hh-HHHHhcchHHHHHhhHHHHHHHHHHHHHHHHcCC--CEEECCCcccChhhccceEEEEEECCCCc------cc
Confidence 00 00111100000 0123345566666 6777777 59999999999999999999999865332 25
Q ss_pred eeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHH
Q 001059 1007 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1086 (1170)
Q Consensus 1007 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~ 1086 (1170)
+||+|||||+|+++||+. +.||||||+++|||+.+|.+... ++.+++|++.+ ++...+|+++++
T Consensus 276 ~i~~GGRYD~L~~~f~~~----------~~pavGfs~~le~l~~~l~~~~~-----~~~~vlI~~~~-~~~~~~a~~i~~ 339 (412)
T PRK00037 276 TVCGGGRYDGLVEQFGGP----------PTPAVGFAIGVERLLLLLEELGE-----EPVDVYVVPLG-EDAELAALKLAE 339 (412)
T ss_pred eeeeccchhHHHHHhCCC----------CCceEEEEEcHHHHHHHHHhcCC-----CCCCEEEEEeC-hHHHHHHHHHHH
Confidence 799999999999999643 46999999999999988763321 46789999985 556788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1087 ~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
.||+.|++|++... ++++++++++|+++|++++|++|++|.++|+|+|||+.++++..+++++++++|.+.+
T Consensus 340 ~Lr~~Gi~v~i~~~-~~~~~~~~~~a~~~gi~~~viig~~e~~~~~v~vr~~~~~~~~~v~~~el~~~i~~~~ 411 (412)
T PRK00037 340 KLRAAGIRVELDYG-GRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDELVEALKELL 411 (412)
T ss_pred HHHHCCCeEEEeCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEECCCCceEEeeHHHHHHHHHHhh
Confidence 99999999998665 5789999999999999999999999999999999999999999999999999988764
No 12
>TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit. Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit.
Probab=100.00 E-value=2.7e-52 Score=477.10 Aligned_cols=299 Identities=23% Similarity=0.335 Sum_probs=261.9
Q ss_pred ccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhC
Q 001059 719 IQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 794 (1170)
Q Consensus 719 ~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~ 794 (1170)
+|++|.++..++.+++.++++|++|||++|.||+| .+...+....++||+|.|++|+.++||||+|+|+||+++++
T Consensus 1 ~D~~p~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~le~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~ 80 (314)
T TIGR00443 1 RDLLPEEAARKEEIERQLQDVFRSWGYQEIITPTLEYLDTLSAGGGILNEDLFKLFDSLGRVLGLRPDMTTPIARAVSTR 80 (314)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCcchhhHHHhcccCCcchhceEEEECCCCCEEeecCcCcHHHHHHHHHh
Confidence 58999999999999999999999999999999999 33334336788999999999999999999999999998874
Q ss_pred ---CCCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHH
Q 001059 795 ---QKSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIW 870 (1170)
Q Consensus 795 ---~~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l 870 (1170)
...|+|+||+|+|||+++++. +.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ +.|.|||+++++.++
T Consensus 81 ~~~~~~p~r~~y~g~VfR~~~~~~gr~re~~Q~g~Eiig~~~~~adaEvi~l~~~~l~~lg~~~-~~i~l~~~~il~~il 159 (314)
T TIGR00443 81 LRDRPLPLRLCYAGNVFRTNESGAGRSREFTQAGVELIGAGGPAADAEVIALLIEALKALGLKD-FKIELGHVGLVRALL 159 (314)
T ss_pred cccCCCCeEEEEeceEeecCCCcCCCcccccccceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCcHHHHHHHH
Confidence 246999999999999988765 556799999999999999999999999999999999985 999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC
Q 001059 871 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 950 (1170)
Q Consensus 871 ~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~ 950 (1170)
+.+++++++++.+++++++++.. .. ++++.+.+++.+.++.+..++ .+.|++.+++++++++. .+
T Consensus 160 ~~~~~~~~~~~~l~~~l~~~~~~---------~~----~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~~l~~l~~~~-~~ 224 (314)
T TIGR00443 160 EEAGLPEEAREALREALARKDLV---------AL----EELLAELGLDPEVRERLLALP-RLRGDGEEVLEEARALA-GS 224 (314)
T ss_pred HHcCCCHHHHHHHHHHHHhcCHH---------HH----HHHHHhcCCCHHHHHHHHHHH-HhcCChHHHHHHHHHhc-cC
Confidence 99999999999999999998832 11 345556788989999999998 57887788999998844 46
Q ss_pred hhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhccccc
Q 001059 951 KPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDRE 1025 (1170)
Q Consensus 951 ~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~ 1025 (1170)
+.+.+++++| .++.+|+..+|.||++++|+++||||+|||+|..+.+. +||+|||||+|+++||.
T Consensus 225 ~~~~~~l~~l~~~~~~l~~~~~~~~i~~D~~~~r~~~YYtGivFe~~~~~~~~--------~i~~GGRYD~L~~~fg~-- 294 (314)
T TIGR00443 225 ETAEAALDELEAVLELLEARGVEEYISLDLGLVRGYHYYTGLIFEGYAPGLGA--------PIAGGGRYDNLLGRFGR-- 294 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEecccccCCCCccceEEEEEECCCCC--------cccCCccHHHHHHHcCC--
Confidence 6667777777 77888887789999999999999999999999865443 69999999999998853
Q ss_pred ccccCCCCCCCCceEEeccHHHHHhhc
Q 001059 1026 YVGYASRTNPPSGVGASLALETIIQHY 1052 (1170)
Q Consensus 1026 ~~~~~g~~~~~pAvGfaiglerL~~~L 1052 (1170)
++||||||+++|||+.++
T Consensus 295 ---------~~~AvGfa~~~d~l~~~l 312 (314)
T TIGR00443 295 ---------PLPATGFALNLERLLEAL 312 (314)
T ss_pred ---------CCCCceEEecHHHHHHHh
Confidence 469999999999998765
No 13
>PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.1e-51 Score=477.87 Aligned_cols=305 Identities=20% Similarity=0.270 Sum_probs=252.7
Q ss_pred hhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHHHhC-CCCcee
Q 001059 727 ELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-QKSSFK 800 (1170)
Q Consensus 727 ~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~-~~~P~r 800 (1170)
...++++++++++|++|||.+|+||+| .+..+ ++...++||+|.|++|+.++||||+|+||||.++++ ...|.|
T Consensus 5 ~~~~~i~~~i~~~f~~~Gy~~I~tP~lE~~e~~~~~~g~~~~~~~~~f~D~~G~~l~LRpD~T~piaR~~~~~~~~~p~R 84 (373)
T PRK12295 5 SASAAAAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSDENGEELCLRPDFTIPVCRRHIATAGGEPAR 84 (373)
T ss_pred hhHHHHHHHHHHHHHHcCCEEeeCCccccHHHhhhccCchhhcceEEEECCCCCEEeeCCCCcHHHHHHHHHcCCCCCeE
Confidence 345689999999999999999999999 33333 677788999999999999999999999999988774 456999
Q ss_pred EEEecCeEEcCCCCCCCCceeEeEEEEeCCC-CcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHH
Q 001059 801 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 879 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~-~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~ 879 (1170)
+||+|+|||++ .++.+||+|+|+|+||.. ++.+|+|||.++.++|+.+|+.+ ++|+|||+++++++++.+++++++
T Consensus 85 ~~Y~g~VfR~~--~gr~rEf~Q~GvEiiG~~~~~~aDaEvi~l~~~~L~~lgl~~-~~i~ig~~~il~~ll~~l~l~~~~ 161 (373)
T PRK12295 85 YAYLGEVFRQR--RDRASEFLQAGIESFGRADPAAADAEVLALALEALAALGPGD-LEVRLGDVGLFAALVDALGLPPGW 161 (373)
T ss_pred EEEEccEEECC--CCCCCcceEeeEEeeCCCCCccchHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHcCCCHHH
Confidence 99999999998 567788999999999975 47999999999999999999985 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----Cc-------------------------------------ccccchHHHHHHHHHHHc---
Q 001059 880 REKVAELLAMMGSLRP----QS-------------------------------------SEWKSKWVVIRRQLLQEL--- 915 (1170)
Q Consensus 880 ~~~l~~~l~~~d~~~~----~~-------------------------------------~~~~~~~~~~~~~~~~~~--- 915 (1170)
+++++++++++++... .. ...+..+.++.+++....
T Consensus 162 ~~~l~~~i~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~r~~~ei~~~l~~~~~~~ 241 (373)
T PRK12295 162 KRRLLRHFGRPRSLDALLARLAGPRVDPLDEHAGVLAALADEAAARALVEDLMSIAGISPVGGRSPAEIARRLLEKAALA 241 (373)
T ss_pred HHHHHHHHhccchHHHHHHhhcccccccccchhhhhhhhccchhhhhhhhhhhhhccccccccccHHHHHHHHHhhhccc
Confidence 9999999998885210 00 000112233333333221
Q ss_pred ---CCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh-hHHHHHHHH-----HHHHccCc-ceEEEccCCCCCCCccc
Q 001059 916 ---NLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK-PTRKALDEL-----YLRIWRIE-KNIYIDALMPPIESYHR 985 (1170)
Q Consensus 916 ---~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~-~~~~~l~~L-----~l~~~g~~-~~i~~Dl~lvrgldYYt 985 (1170)
+++.+.++.+..++ .+.|+.++++++++.+...++ .+.+++++| .++.+|+. +++.||++++||++|||
T Consensus 242 ~~~~~~~~~~~~l~~l~-~~~g~~~~~~~~l~~l~~~~~~~~~~al~~L~~l~~~l~~~g~~~~~v~~D~~~vrgl~YYT 320 (373)
T PRK12295 242 AAARLPAEALAVLERFL-AISGPPDAALAALRALAADAGLDLDAALDRFEARLAALAARGIDLERLRFSASFGRPLDYYT 320 (373)
T ss_pred ccCCCCHHHHHHHHHHH-HccCCHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHcCCCcceEEEecccccCCcccc
Confidence 78888899999998 688888889999998766556 677788777 77888886 67999999999999999
Q ss_pred ceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhh
Q 001059 986 NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1051 (1170)
Q Consensus 986 G~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~ 1051 (1170)
|+|||+|..+.+ ..+||+|||||+|++.||+ +.++||||||+|+|||+++
T Consensus 321 GiVFe~~~~~~~-------~~~I~~GGRYD~Li~~fg~---------~~~~pAvGfai~~drl~~~ 370 (373)
T PRK12295 321 GFVFEIRAAGNG-------DPPLAGGGRYDGLLTRLGA---------GEPIPAVGFSIWLDRLAAL 370 (373)
T ss_pred ceEEEEEECCCC-------CCcccCCcCHHHHHHHhCC---------CCCCCeeEEEEcHHHHHhh
Confidence 999999987541 1379999999999998863 1357999999999999765
No 14
>PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A ....
Probab=100.00 E-value=2.5e-50 Score=461.91 Aligned_cols=297 Identities=25% Similarity=0.386 Sum_probs=243.9
Q ss_pred ccccccchhhhhhhhHHhHHHHHHHHcCCccccccceec----cCCCcccccceEEEeccCCceeeecCCCCHHHHHHHH
Q 001059 717 SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAI 792 (1170)
Q Consensus 717 G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~ 792 (1170)
|++|++|.+++.++++++.++++|++|||++|.||+|+. ........+++|+|.|++|+.++||||+|+|+||+++
T Consensus 1 G~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~i~~P~le~~~~~~~~~~~~~~~~~~~~D~~G~~l~LR~D~T~~iaR~~a 80 (311)
T PF13393_consen 1 GFRDLLPEEARKRERIESKLREVFERHGYEEIETPLLEYYELFLDKSGEDSDNMYRFLDRSGRVLALRPDLTVPIARYVA 80 (311)
T ss_dssp T---B-HHHHHHHHHHHHHHHHHHHHTT-EE-B--SEEEHHHHHCHSSTTGGCSEEEECTTSSEEEE-SSSHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEECCeEeecHHhhhccccchhhhEEEEecCCcEeccCCCCcHHHHHHHH
Confidence 899999999999999999999999999999999999922 2223333559999999999999999999999999999
Q ss_pred hCC--CCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHH-HcCCCcceEEEeCcHHHHHH
Q 001059 793 SNQ--KSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVT-RFFHAESCDIHLNHGDLLEA 868 (1170)
Q Consensus 793 ~~~--~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~-~lgi~~~~~i~lg~~~il~~ 868 (1170)
++. ..|.|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|+|.++.++|+ .+|+.+ ++|+|||+++++.
T Consensus 81 ~~~~~~~~~r~~y~g~vfR~~~~~~g~~re~~Q~g~Eiig~~~~~~daEvi~l~~e~l~~~l~~~~-~~i~i~h~~i~~~ 159 (311)
T PF13393_consen 81 RNLNLPRPKRYYYIGPVFRYERPGKGRPREFYQCGFEIIGSSSLEADAEVIKLADEILDRELGLEN-FTIRINHTGILDA 159 (311)
T ss_dssp HCCGSSSSEEEEEEEEEEEEETTTTTBESEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-EEEEEEEHHHHHH
T ss_pred HhcCcCCCceEEEEcceeeccccCCCCCceeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCC-cEEEEcCchhhHH
Confidence 974 67999999999999987764 556799999999999999999999999999997 999975 9999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 001059 869 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 948 (1170)
Q Consensus 869 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 948 (1170)
+++.+|+++++++.+..++.+++. .++ ++++.+.+++.+..+.+..++ .+.|+.+.+.+.++. +.
T Consensus 160 il~~~gl~~~~~~~l~~~l~~~~~------------~~~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~l~~~~~~-~~ 224 (311)
T PF13393_consen 160 ILEHLGLPEDLRRELLEALDKKDL------------SEL-KELLSELGLSSESLEILDKLP-ELEGDPEALEELLES-LP 224 (311)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHTHH------------HHH-HHHHHHTTTTHHHHHHHHHHH-HHHHSHHHHHHHHHH-HT
T ss_pred HHhhcCCChhhhhhhhhheecccc------------ccc-hhhhcccccchhhhhhhhccc-cccchHHHHHHHHHH-Hh
Confidence 999999999999999999988762 223 456667889999999999988 566775554444444 45
Q ss_pred CChhHHHHHHHH-----HHHHcc-CcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcc
Q 001059 949 ADKPTRKALDEL-----YLRIWR-IEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022 (1170)
Q Consensus 949 ~~~~~~~~l~~L-----~l~~~g-~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1022 (1170)
.++.+.+++++| +++.+| ...+|.||++++|+++||||+||++|..+.+. .||+|||||+|+++||
T Consensus 225 ~~~~~~~~~~~L~~l~~~l~~~~~~~~~i~~D~~~~r~~~YYtG~vFe~~~~~~~~--------~ia~GGRYD~L~~~fg 296 (311)
T PF13393_consen 225 SSPALQEALEELEELLKLLEALGYPSIKIIFDLSLVRGLDYYTGIVFEVYAPGRGS--------PIAGGGRYDNLLEQFG 296 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTHTTTTEEEETT-GTSSTTEESEEEEEEETTSSS--------ESEEEEEETTHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccCceEEEChhhccchhhcCCEEEEEEEcCCCc--------eEecccChhHHHHHhC
Confidence 555555666666 788888 57899999999999999999999999976554 7999999999999985
Q ss_pred cccccccCCCCCCCCceEEeccHHHH
Q 001059 1023 DREYVGYASRTNPPSGVGASLALETI 1048 (1170)
Q Consensus 1023 ~~~~~~~~g~~~~~pAvGfaiglerL 1048 (1170)
. ++||||||+++|||
T Consensus 297 ~-----------~~~AvGfai~ld~L 311 (311)
T PF13393_consen 297 K-----------PIPAVGFAIGLDRL 311 (311)
T ss_dssp S-----------S-EEEEEEEEHHHH
T ss_pred C-----------CCceEEEEEEeccC
Confidence 4 36999999999997
No 15
>PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=1.7e-48 Score=435.74 Aligned_cols=268 Identities=18% Similarity=0.231 Sum_probs=216.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccceeccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWA 791 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~ 791 (1170)
..|+|++|++|.++..+++++++++++|++|||++|.||+|++... .....++||+|.|++|+.++||||+|+||||++
T Consensus 6 ~~p~G~rD~lp~e~~~~~~i~~~l~~vf~~~Gy~~I~tP~lE~~e~~~~~~~~~~y~~~D~~g~~l~LRpD~T~~iaR~~ 85 (281)
T PRK12293 6 EIPQGSKLYFGKSAKLKREIENVASEILYENGFEEIVTPFFSYHQHQSIADEKELIRFSDEKNHQISLRADSTLDVVRIV 85 (281)
T ss_pred CCCCcccccCcHHHHHHHHHHHHHHHHHHHcCCeEeeccceeehhhhcccchhceEEEECCCCCEEEECCcCCHHHHHHH
Confidence 4699999999999999999999999999999999999999955444 445679999999999999999999999999999
Q ss_pred HhCC---CCceeEEEecCeEEcCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHH
Q 001059 792 ISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEA 868 (1170)
Q Consensus 792 ~~~~---~~P~r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~ 868 (1170)
+++. ..|+|+||+|+|||+++ +||+|+|+|+||.+++ +|+|++|.++|+++|++ ++|+|||++++++
T Consensus 86 a~~~~~~~~p~r~~Y~g~vfR~~~-----rEf~Q~GvEliG~~~~---~Evi~la~~~l~~lgl~--~~i~ig~~~i~~~ 155 (281)
T PRK12293 86 TKRLGRSTEHKKWFYIQPVFRYPS-----NEIYQIGAELIGEEDL---SEILNIAAEIFEELELE--PILQISNIKIPKL 155 (281)
T ss_pred HHhcccCCCceeEEEeccEEecCC-----CcccccCeEeeCCCCH---HHHHHHHHHHHHHcCCC--CEEEECCHHHHHH
Confidence 8753 35999999999999863 7999999999999986 69999999999999995 5799999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 001059 869 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 948 (1170)
Q Consensus 869 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 948 (1170)
+++.++++.+..+.. .++ +++. +..+.+..++ .+.+. + .++++...
T Consensus 156 ~l~~~~~~~~~~~~~--~~~---------------------~~~~------~~~~~l~~l~-~~~~~-~-~~~~~~~~-- 201 (281)
T PRK12293 156 VAEILGLDIEVFKKG--QIE---------------------KLLA------QNVPWLNKLV-RIKTL-E-DLDEVIEL-- 201 (281)
T ss_pred HHHHcCCCHHHHhHH--HHH---------------------HHHH------HhHHHHHHHH-hcCCH-H-HHHHHHhh--
Confidence 999999987654221 011 1111 1223344444 23331 2 23333331
Q ss_pred CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccc
Q 001059 949 ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1026 (1170)
Q Consensus 949 ~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~ 1026 (1170)
.+....+++++| .++.+++. .+.||++++||++||||+|||+|..+ .+||||||||+.
T Consensus 202 ~~~~~~~~l~~l~~~l~~l~~~-~~~~Dl~~vrgl~YYTGivFe~~~~~----------~~i~~GGRYD~~--------- 261 (281)
T PRK12293 202 VPDEIKEELEKLKELAESIKYE-NLVIAPLYYAKMRYYDDLFFRFFDGN----------STLASGGNYEID--------- 261 (281)
T ss_pred CCHHHHHHHHHHHHHHHHcCCC-cEEEccccccCCCCccceEEEEEECC----------ceeccccCCCCC---------
Confidence 235677888888 77777764 49999999999999999999999863 169999999931
Q ss_pred cccCCCCCCCCceEEeccHHHHHhhc
Q 001059 1027 VGYASRTNPPSGVGASLALETIIQHY 1052 (1170)
Q Consensus 1027 ~~~~g~~~~~pAvGfaiglerL~~~L 1052 (1170)
+.||||||+|+|||+.+|
T Consensus 262 --------~~PAvGfa~~ld~l~~~l 279 (281)
T PRK12293 262 --------GISSSGFALYTDNLIEIL 279 (281)
T ss_pred --------CCCcceEEeeHHHHHHHh
Confidence 369999999999998775
No 16
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-48 Score=428.53 Aligned_cols=261 Identities=28% Similarity=0.399 Sum_probs=219.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-----hhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
+.+.|.+.+.||+|+||.|.+|..+.||+.||||+++.+.... .....+.+|+++|++|+|||||++++.|..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-- 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-- 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--
Confidence 4578889999999999999999999999999999998654322 122346799999999999999999998843
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
..+.||||||++ |+|.+.+...+.+.+...+.+++|++.|+
T Consensus 248 --------------------------------------~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~av 289 (475)
T KOG0615|consen 248 --------------------------------------PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAV 289 (475)
T ss_pred --------------------------------------CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHH
Confidence 456799999996 69999999999999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.|||++||+||||||+|||+..+ ..+||+|||+|++..... .+.+.||||.|.|||++.+.
T Consensus 290 kYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------fm~TlCGTpsYvAPEVl~~k 353 (475)
T KOG0615|consen 290 KYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------FMKTLCGTPSYVAPEVLASK 353 (475)
T ss_pred HHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce----------------ehhhhcCCccccChhheecC
Confidence 99999999999999999999876 789999999999864221 24678999999999999874
Q ss_pred C--CCCccchhHHHHHHHHHhhc---CCCchhHHH-HHHHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 584 P--KIDEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 584 ~--~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~-~~~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+ .+..++||||+||+||-+++ ||....... ...++...... .|+.|..++.++.+||.+||..||++|||+++
T Consensus 354 g~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e 433 (475)
T KOG0615|consen 354 GVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADE 433 (475)
T ss_pred CeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence 3 25568999999999999997 776554443 33333333333 46789999999999999999999999999999
Q ss_pred HHhccCCCCchHH
Q 001059 657 LLQDALPPQMEYE 669 (1170)
Q Consensus 657 iL~~~~~~~~~~~ 669 (1170)
+|+|||+.-....
T Consensus 434 aL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 434 ALNHPWFKDAPCL 446 (475)
T ss_pred HhcChhhhccccc
Confidence 9999999866533
No 17
>COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-47 Score=431.68 Aligned_cols=368 Identities=20% Similarity=0.202 Sum_probs=289.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..|.|++|.+|.+++.++.|++++++.|.+|||+.|+||++ .+... ++..+++||+|+|..|+.+|||||||+||
T Consensus 4 ~lp~g~rd~Lp~e~~~~~~i~~~l~~~f~~~Gy~~v~tP~lE~~d~~l~~~g~~l~~~~f~l~d~~g~~l~LRpD~T~pV 83 (390)
T COG3705 4 QLPEGIRDVLPLEARRKEEIRDQLLALFRAWGYERVETPTLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPV 83 (390)
T ss_pred cCCCcchhcchhHHhhHHHHHHHHHHHHHHhCCccccccccchhhhhhhccchhhhhhheEEecCCCCeEEecccccHHH
Confidence 57899999999999999999999999999999999999999 22223 67789999999999999999999999999
Q ss_pred HHHHHhCCC-CceeEEEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHH
Q 001059 788 IRWAISNQK-SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 865 (1170)
Q Consensus 788 aR~~~~~~~-~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i 865 (1170)
+|.+++... .|.|+||.|+|||..+...+++ ||+|+|||++|.++..||+|||.+++.+|+++|+.+ ++|.|||++|
T Consensus 84 aR~~~~~~~~~P~Rl~Y~G~Vfr~~~~~~g~~~Ef~QaGiEllG~~~~~ADaEvi~la~~~L~~~gl~~-~~l~LG~~gi 162 (390)
T COG3705 84 ARIHATLLAGTPLRLSYAGKVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKALGLAD-LKLELGHAGI 162 (390)
T ss_pred HHHHHHhcCCCCceeeecchhhhcchhccCcccchhhhhhHHhCCCcchhhHHHHHHHHHHHHHcCCcC-eEEEeccHHH
Confidence 999998554 5999999999999865455555 999999999999999999999999999999999985 9999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhc
Q 001059 866 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 945 (1170)
Q Consensus 866 l~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~ 945 (1170)
+++++..+++++.++.+++++|.+++... + .++....+++++....+..++. +.|. .+++.+++.
T Consensus 163 f~all~~~~l~~~~~~~L~~a~~~k~~~~------------~-~~~~~~~~~~~~~~~~l~~l~~-l~gg-~e~l~~~~~ 227 (390)
T COG3705 163 FRALLAAAGLPGGWRARLRRAFGDKDLLG------------L-ELLVLAAPLSPELRGRLSELLA-LLGG-REVLERARG 227 (390)
T ss_pred HHHHHHHcCCChhHHHHHHHHHhccchhh------------H-HHHhhccCCChhhhHHHHHHHH-HhCC-HHHHHHHHH
Confidence 99999999999999999999999988432 1 3344446777888888888884 5554 466777776
Q ss_pred cCCCChhHHHHHHHH---HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcc
Q 001059 946 ALPADKPTRKALDEL---YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022 (1170)
Q Consensus 946 ~~~~~~~~~~~l~~L---~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1022 (1170)
.+........+++++ .-...+...++.+|++++|+++||||++|++|..+.+. ++++|||||+|.+.||
T Consensus 228 ~l~~~~~~~~al~~~~~l~di~~~~~e~i~lDLg~l~~~~YyTg~~F~ay~~~~~~--------al~~GGRYd~l~~~f~ 299 (390)
T COG3705 228 LLDELMAQGIALNEGRALADIARRLIEKIALDLGRLRHFDYYTGLVFLAYADGLGD--------ALASGGRYDGLLGLFG 299 (390)
T ss_pred hhhhhhhhhhhhhhhhhHHHHHhccchhheehhhcccccchhhceeeeeeeccccc--------hhhcccchhhhhhhcC
Confidence 555433333344444 11112233569999999999999999999999887765 7999999999988886
Q ss_pred cccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCC
Q 001059 1023 DREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1102 (1170)
Q Consensus 1023 ~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~ 1102 (1170)
.. .||+||++++++|.+.. .+ ......++.+.... +.....+++++.++|..|-.+.....
T Consensus 300 ~~-----------~patGf~~~l~~l~~~~----~~-~~~~~~~~~f~~~~-~~~~~~~~e~~~~~r~~g~~~~~~l~-- 360 (390)
T COG3705 300 RA-----------APATGFALRLDALAQGG----LP-LEERRYAALFGREL-DYYTGAAFEAAQALRLAGGGRYDRLL-- 360 (390)
T ss_pred cc-----------ccchhhHhhHHHHHhcC----CC-cccchhhhccCccc-hhhHHHHHHHHHHhcccCCeEEEecc--
Confidence 53 39999999999998621 11 12334455555442 33458899999999977655542222
Q ss_pred CCHHHHHHHHHhCCCcEEEEEcCC
Q 001059 1103 PSLTEQYEYASEHDIKCLVILTDT 1126 (1170)
Q Consensus 1103 ~~l~k~~~~A~~~gi~~~iiig~~ 1126 (1170)
...-..+...++.+.+.+...
T Consensus 361 ---~g~~~~~~~~~~~~~~~~~~~ 381 (390)
T COG3705 361 ---TGLGASEEIPGVGFSLWLDRG 381 (390)
T ss_pred ---cccchHhhhcccceeEeeccc
Confidence 122234555677777776544
No 18
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-47 Score=417.35 Aligned_cols=259 Identities=29% Similarity=0.457 Sum_probs=222.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+..+.+++.+..||+|..|+||||+|+.|++.+|+|+|. -+......+++.+|+++++.++|||||.+|++|+..+
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~-- 150 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG-- 150 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC--
Confidence 3456678999999999999999999999999999999995 3455667889999999999999999999999997542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
. .++|+||||+ |+|.+++...+++++....+++.+|++||.|
T Consensus 151 ------------------------------------~-~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~Y 193 (364)
T KOG0581|consen 151 ------------------------------------E-EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSY 193 (364)
T ss_pred ------------------------------------c-eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 1 5799999997 6999999999999999999999999999999
Q ss_pred HHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||. ++||||||||+|||++..|.|||||||.+..+... ...+++||..|||||.+++ ..|+
T Consensus 194 Lh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----------------~a~tfvGT~~YMsPERi~g-~~Ys 255 (364)
T KOG0581|consen 194 LHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----------------IANTFVGTSAYMSPERISG-ESYS 255 (364)
T ss_pred HhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----------------hcccccccccccChhhhcC-CcCC
Confidence 995 99999999999999999999999999999976422 2367899999999999999 6899
Q ss_pred ccchhHHHHHHHHHhhc---CCCch-----hHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTA-----MERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~-----~~~~~~~~~l~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
.++||||||++++||++ ||.+. ..-+.+..+.. ...|..+. ..++++++||..||.+||.+|||+.|++
T Consensus 256 ~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl 333 (364)
T KOG0581|consen 256 VKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLL 333 (364)
T ss_pred cccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 99999999999999996 66653 23333344433 22333333 3788999999999999999999999999
Q ss_pred hccCCCCchH
Q 001059 659 QDALPPQMEY 668 (1170)
Q Consensus 659 ~~~~~~~~~~ 668 (1170)
+|||+.+...
T Consensus 334 ~Hpfi~~~~~ 343 (364)
T KOG0581|consen 334 QHPFIKKFED 343 (364)
T ss_pred cCHHHhhccc
Confidence 9999887654
No 19
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-46 Score=435.39 Aligned_cols=251 Identities=31% Similarity=0.514 Sum_probs=224.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..|+..+.||+|||+.||.+++..+|+.||+|+++.+. ......+++.+||++.++|+|||||+++++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F---------- 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF---------- 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe----------
Confidence 57999999999999999999999999999999998654 2334567899999999999999999999998
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
++..++|||.|+|. ++|..++.+++.++|++|+.|++||+.||.|||++
T Consensus 88 ------------------------------EDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~ 137 (592)
T KOG0575|consen 88 ------------------------------EDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL 137 (592)
T ss_pred ------------------------------ecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 34688999999997 69999999999999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+|||||||..|+|++++.+|||+|||+|+.+..+. -...+.||||.|.|||++.+ ..++..+||
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~---------------Erk~TlCGTPNYIAPEVl~k-~gHsfEvDi 201 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG---------------ERKKTLCGTPNYIAPEVLNK-SGHSFEVDI 201 (592)
T ss_pred CceecccchhheeecCcCcEEecccceeeeecCcc---------------cccceecCCCcccChhHhcc-CCCCCchhh
Confidence 99999999999999999999999999999876432 12467899999999999997 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
||+|||||-||. ||....-.+....+......+|. ..+.++++||.+||++||.+|||+++||.|+||.
T Consensus 202 WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~---~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 202 WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS---HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc---ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 999999999996 88887777777777766666776 5567999999999999999999999999999993
No 20
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-46 Score=411.98 Aligned_cols=261 Identities=31% Similarity=0.461 Sum_probs=228.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|+++++||+|+||+||+++.+.+++.||+|+++++.... ........|..+|..++||+||+++..|
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-------- 94 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-------- 94 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--------
Confidence 3589999999999999999999999999999999998765433 2567789999999999999999999887
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
++...+|+|+||++ |.|..+|++.+.|++..++.|+.+|+.||.|||
T Consensus 95 --------------------------------Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH 142 (357)
T KOG0598|consen 95 --------------------------------QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLH 142 (357)
T ss_pred --------------------------------ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHH
Confidence 35678999999996 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+|||+|.+|+++|+|||+|+...... ....++|||+.|||||++.+ ..|+.++
T Consensus 143 ~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------~~t~tfcGT~eYmAPEil~~-~gy~~~v 206 (357)
T KOG0598|consen 143 SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------DATRTFCGTPEYMAPEILLG-KGYDKAV 206 (357)
T ss_pred hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC---------------CccccccCCccccChHHHhc-CCCCccc
Confidence 9999999999999999999999999999998532111 12345799999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC----CHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----ta~eiL~~~~~ 663 (1170)
|+|||||++|||++ ||...+.......++..+...++. ..+++++++++++|+.||.+|. ++.+|-+||||
T Consensus 207 DWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~--~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 207 DWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG--YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred chHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 99999999999997 888887777777777655344443 2456999999999999999995 79999999999
Q ss_pred CCchHHHH
Q 001059 664 PQMEYELL 671 (1170)
Q Consensus 664 ~~~~~~~~ 671 (1170)
..+.|+.+
T Consensus 285 ~~inW~~l 292 (357)
T KOG0598|consen 285 KGINWEKL 292 (357)
T ss_pred ccCCHHHH
Confidence 99998765
No 21
>cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain. HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain.
Probab=100.00 E-value=4.3e-45 Score=407.70 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=208.0
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCC---
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQK--- 796 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~--- 796 (1170)
++..++.+++.++++|++|||++|.||+| .+... ++...++||+|.|++|+.++||||+|+|+||+++++..
T Consensus 1 ~~~~~~~l~~~l~~~f~~~Gy~~v~tP~le~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpd~T~~iaR~~a~~~~~~~ 80 (261)
T cd00773 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLALRPDLTAPVARAVAENLLSLP 80 (261)
T ss_pred ChHHHHHHHHHHHHHHHHcCCEEeeccceeeHHHhcccccccccceEEEEECCCCCEEEeCCCCcHHHHHHHHhcCccCC
Confidence 36788999999999999999999999999 33333 56778999999999999999999999999999998654
Q ss_pred CceeEEEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCC
Q 001059 797 SSFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGI 875 (1170)
Q Consensus 797 ~P~r~~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl 875 (1170)
.|+|+||+|+|||+++++ ++.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+.+ ++|+|||+++++++++.+++
T Consensus 81 ~p~k~~y~g~vfR~e~~~~g~~re~~Q~g~Eiig~~~~~~daE~i~l~~~~l~~lg~~~-~~i~l~~~~i~~~l~~~~~~ 159 (261)
T cd00773 81 LPLKLYYIGPVFRYERPQKGRYREFYQVGVEIIGSDSPLADAEVIALAVEILEALGLKD-FQIKINHRGILDGIAGLLED 159 (261)
T ss_pred CCeEEEEEcCEEecCCCCCCCccceEEeceeeeCCCChHHHHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHhhccCC
Confidence 699999999999998765 4566799999999999999999999999999999999975 99999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHH
Q 001059 876 KAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 955 (1170)
Q Consensus 876 ~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~ 955 (1170)
+++.+.++.+.+++ ...+
T Consensus 160 ~~~~~~~l~~~l~~--------------------------------------------------------------~~l~ 177 (261)
T cd00773 160 REEYIERLIDKLDK--------------------------------------------------------------EALA 177 (261)
T ss_pred CHHHHHHHHHHhhH--------------------------------------------------------------HHHH
Confidence 87655544322221 0111
Q ss_pred HHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCC
Q 001059 956 ALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1033 (1170)
Q Consensus 956 ~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~ 1033 (1170)
.|+.+ .++.+|+..+|.||++++|+++||||+||++|..+.+ ...+||+|||||+|+++|++.
T Consensus 178 ~l~~l~~~l~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~------~~~~i~~GGRYD~L~~~f~~~--------- 242 (261)
T cd00773 178 HLEKLLDYLEALGVDIKYSIDLSLVRGLDYYTGIVFEAVADGLG------AQGSIAGGGRYDGLLEEFGGE--------- 242 (261)
T ss_pred HHHHHHHHHHHcCCCceEEEcCccccCCcccCceEEEEEECCCC------ccCeEeeccCHHHHHHHhCCC---------
Confidence 12222 4566777678999999999999999999999998641 124799999999999987432
Q ss_pred CCCCceEEeccHHHHHhhc
Q 001059 1034 NPPSGVGASLALETIIQHY 1052 (1170)
Q Consensus 1034 ~~~pAvGfaiglerL~~~L 1052 (1170)
++||||||+++|||+.+|
T Consensus 243 -~~~avGfa~~~d~l~~~~ 260 (261)
T cd00773 243 -DVPAVGFAIGLERLLLAL 260 (261)
T ss_pred -CCCeEEEEEcHHHHHHhh
Confidence 469999999999998775
No 22
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-45 Score=407.12 Aligned_cols=259 Identities=27% Similarity=0.481 Sum_probs=224.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+...+|+..+.||+|+||+||+|+++.++..||||.|.++.-.....+.+..|+.+|+.++|||||++++|+.
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~------- 79 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE------- 79 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-------
Confidence 3467999999999999999999999999999999999877656667778899999999999999999999973
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...++|+|||||. |+|.++++..+.+++..++.++.||+.||++||
T Consensus 80 ---------------------------------~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 80 ---------------------------------DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred ---------------------------------cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999996 799999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCC------CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 511 GQGIIHRDLTPNNIFFDAR------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
+++||||||||+||||+.. -.+||+|||+|+.+.... ...+.||+|.|||||+++. .
T Consensus 127 ~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----------------~a~tlcGSplYMAPEV~~~-~ 189 (429)
T KOG0595|consen 127 ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----------------MAETLCGSPLYMAPEVIMS-Q 189 (429)
T ss_pred HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----------------HHHHhhCCccccCHHHHHh-c
Confidence 9999999999999999875 459999999999875332 1245799999999999986 6
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
+|+.|+|+||+|+|+|+|++ ||......+....+.......|......++...+|+...++.+|..|-++.+-+.|+
T Consensus 190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 89999999999999999997 887777777766555444445544444555677999999999999999999999998
Q ss_pred CCCCch
Q 001059 662 LPPQME 667 (1170)
Q Consensus 662 ~~~~~~ 667 (1170)
+.....
T Consensus 270 ~l~~~p 275 (429)
T KOG0595|consen 270 FLAANP 275 (429)
T ss_pred hcccCc
Confidence 766554
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-45 Score=417.45 Aligned_cols=274 Identities=30% Similarity=0.517 Sum_probs=238.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
.+..+||.+.+.||.|+|++|++|+.+.+++.||||++.++.... .....+.+|-.+|.+| .||.|+++|..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----- 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----- 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence 344689999999999999999999999999999999997654321 2234577899999999 899999999887
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
++...+|+|+||++ |+|.+++.+.+.|++..++.|+.||+.||+
T Consensus 144 -----------------------------------QD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 144 -----------------------------------QDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALE 188 (604)
T ss_pred -----------------------------------ecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 34678999999997 799999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|||||||||+|||+|.|+++||+|||.|+.+......+.. +........+..+++||..|.+||+|.. ...+
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~--~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~ 265 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQEN--PVDPNQASSRRSSFVGTAEYVSPELLND-SPAG 265 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccC--ccCcccccCcccceeeeecccCHHHhcC-CCCC
Confidence 999999999999999999999999999999999998765543321 1111111222477999999999999998 6789
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
+.+|+|+||||||+|+. ||....+--.+.+++.....+|+.++ +.+.+||+++|..||++|+|+.+|.+||||.
T Consensus 266 ~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 266 PSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred cccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 99999999999999996 99999998888888888888888665 6899999999999999999999999999999
Q ss_pred CchHHH
Q 001059 665 QMEYEL 670 (1170)
Q Consensus 665 ~~~~~~ 670 (1170)
...|+.
T Consensus 343 ~Vdw~n 348 (604)
T KOG0592|consen 343 GVDWEN 348 (604)
T ss_pred cCChhh
Confidence 999876
No 24
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-46 Score=394.31 Aligned_cols=250 Identities=30% Similarity=0.560 Sum_probs=211.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEE-EEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ-AWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~-~~~e~~~~~~~ 432 (1170)
+.+|+++++||+|+||+||++.+..+|..+|.|.++....+....+....|+.+|++|+|||||++++ .|.+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~------- 90 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE------- 90 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc-------
Confidence 57899999999999999999999999999999999877777777889999999999999999999986 3311
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+..-++|+||||+ |+|.+.+.. ...+++..+|+++.|++.||.
T Consensus 91 --------------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~ 138 (375)
T KOG0591|consen 91 --------------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY 138 (375)
T ss_pred --------------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence 2344899999996 799998853 345999999999999999999
Q ss_pred HHHh--CC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 508 HIHG--QG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 508 yLHs--~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
++|+ .. |+||||||.||+|+.+|.+||+|||+++++.... ....+.+|||.||+||.+.+
T Consensus 139 ~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~---------------tfA~S~VGTPyYMSPE~i~~- 202 (375)
T KOG0591|consen 139 HCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT---------------TFAHSLVGTPYYMSPERIHE- 202 (375)
T ss_pred HHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh---------------HHHHhhcCCCcccCHHHHhc-
Confidence 9999 45 9999999999999999999999999999875432 12357899999999999998
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..|++++||||+||++|||+. ||.+..-.+...++ ..+..|+.+ ...+.++..||..|+..||..||+.-.+++
T Consensus 203 ~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI--~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 203 SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI--EQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH--HcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 679999999999999999974 99887444333333 255676665 556678999999999999999999755554
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 281 d 281 (375)
T KOG0591|consen 281 D 281 (375)
T ss_pred H
Confidence 3
No 25
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-45 Score=387.35 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=231.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|+.++.||.|+||.|.+++++.+|..||+|++++... .....+...+|..+|+.+.||+++++++.|.
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~------- 114 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK------- 114 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-------
Confidence 46899999999999999999999999999999999986542 3345567889999999999999999998873
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+||||++ |.|..++++.++|+++.++.|+.||+.||+|||
T Consensus 115 ---------------------------------d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 115 ---------------------------------DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred ---------------------------------cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 4578999999997 589999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|++|||||+|||||.+|++||+|||+|+.+... .-+.||||.|+|||+++. ..|+.++
T Consensus 162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------------------T~TlCGTPeYLAPEii~s-k~ynkav 222 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------------------TWTLCGTPEYLAPEIIQS-KGYNKAV 222 (355)
T ss_pred hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------------------EEEecCCccccChHHhhc-CCCCcch
Confidence 999999999999999999999999999999976421 245699999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC-----CCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R-----Pta~eiL~~~~ 662 (1170)
|+|||||++|||+. ||....+..+..+++..+..+|+.+ ++++++||+++|+.|-.+| ....+|..|+|
T Consensus 223 DWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 223 DWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred hHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 99999999999995 9999999999999999888888765 4599999999999999999 46789999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....|..+
T Consensus 300 F~~v~W~~i 308 (355)
T KOG0616|consen 300 FKGVDWEAI 308 (355)
T ss_pred cccccHHHH
Confidence 999987654
No 26
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.9e-44 Score=410.55 Aligned_cols=278 Identities=28% Similarity=0.480 Sum_probs=229.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++||+++++||+|+||.||+|+.+.||..||+|++++... .......+.-|-.+|....+|+||++|.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 46899999999999999999999999999999999986652 333456788899999999999999999888
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
++..++|+||||+| |++..+|...+.+++..++.|+.+++.|+.-||
T Consensus 211 --------------------------------QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 211 --------------------------------QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred --------------------------------cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH
Confidence 45689999999997 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccC------------CCCCCCCCC---cc-------------
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD------------AAFPTDTGG---VS------------- 562 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~------------~~~~~~~~~---~~------------- 562 (1170)
+.|+|||||||+|+|||..||+||+|||+|+-+........ ...+.+... ..
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 338 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWK 338 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHH
Confidence 99999999999999999999999999999975543211110 000111110 00
Q ss_pred ----ccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCC
Q 001059 563 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKF 633 (1170)
Q Consensus 563 ----~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~ 633 (1170)
.-..+.+|||.|||||++.+ ..|+..||+||||||+||||. ||....+.+...+++.-. ..+|.. ...+
T Consensus 339 ~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s 416 (550)
T KOG0605|consen 339 RNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLS 416 (550)
T ss_pred hhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-Cccc
Confidence 01235699999999999999 459999999999999999995 899888888777665533 334443 3456
Q ss_pred HHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchHHHHHH
Q 001059 634 SEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYELLDN 673 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~ 673 (1170)
+++.+||.+||+ ||.+|. +++||.+||||....|+.+..
T Consensus 417 ~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 417 DEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLRE 458 (550)
T ss_pred HHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhc
Confidence 899999999999 999998 599999999999999987654
No 27
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.9e-45 Score=388.72 Aligned_cols=258 Identities=28% Similarity=0.466 Sum_probs=214.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++.|+.+.++|+|+||+||+|+++.||+.||||++.-.+.+....+-.+||+.+|++++|||+|.++++|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF---------- 70 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF---------- 70 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH----------
Confidence 4678999999999999999999999999999999987777777778889999999999999999999877
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....+++|+|||+.++.+.|... ..++...+.++++|++.|+.|+|++
T Consensus 71 ------------------------------rrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~ 120 (396)
T KOG0593|consen 71 ------------------------------RRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN 120 (396)
T ss_pred ------------------------------HhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence 235789999999999888777765 4699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
++|||||||+||||+.+|.+||||||+|+.+..+. ..-|.++.|.||.|||.+.|..+|+..+||
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---------------d~YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---------------DNYTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCCc---------------chhhhhhhhhhccChhhhcccCcCCCcccc
Confidence 99999999999999999999999999999875321 113567999999999999998889999999
Q ss_pred HHHHHHHHHhhc--CCCchh-HHHHHHHHhhhcCC-------------------CC---------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH--PFSTAM-ERQIVLSDLKQKGE-------------------LP---------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt--Pf~~~~-~~~~~~~~l~~~~~-------------------~p---------~~~~~~~~e~~~LI~ 641 (1170)
||+||++.||++ |.++.. +-.....+...-+. +| ...+..+.-+.+|++
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999998 655443 32222222111111 11 012233445679999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.||..||++|++.+++|.|++|...
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~~ 290 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDGF 290 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHHH
Confidence 9999999999999999999999443
No 28
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-45 Score=406.81 Aligned_cols=262 Identities=31% Similarity=0.464 Sum_probs=216.5
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~ 428 (1170)
...++++|.++++||.|+||.||+|+.+.+|..||||.++.+..+.+.. .-+||+..|++|+ |||||++++.+.++
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~-- 81 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDN-- 81 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhcc--
Confidence 3456789999999999999999999999999999999998777664433 3468999999998 99999999887543
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+.+|++++..++ .|+++.++.|++||++||+
T Consensus 82 -------------------------------------~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~ 124 (538)
T KOG0661|consen 82 -------------------------------------DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLA 124 (538)
T ss_pred -------------------------------------CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHH
Confidence 23899999999999999997654 5999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|+|.+|+.||||||+|||+.....+||+|||+|+.+... ..-|.++.|.||.|||+|.....|+
T Consensus 125 hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk----------------pPYTeYVSTRWYRAPEvLLrs~~Ys 188 (538)
T KOG0661|consen 125 HIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK----------------PPYTEYVSTRWYRAPEVLLRSGYYS 188 (538)
T ss_pred HHHhcCcccccCChhheEecccceeEecccccccccccC----------------CCcchhhhcccccchHHhhhccccC
Confidence 999999999999999999999999999999999975321 1236789999999999998878899
Q ss_pred ccchhHHHHHHHHHhhc--CCC-chhHHHHHHHHhhh-------------------cCCCC--------CccccCCHHHH
Q 001059 588 EKADMYSLGIVFFELWH--PFS-TAMERQIVLSDLKQ-------------------KGELP--------PSWVAKFSEQE 637 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt--Pf~-~~~~~~~~~~~l~~-------------------~~~~p--------~~~~~~~~e~~ 637 (1170)
.+.|||++|||++|+++ |.. +.++.....++..- +..+| .-.+..++++.
T Consensus 189 ~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~ 268 (538)
T KOG0661|consen 189 SPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAA 268 (538)
T ss_pred CchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHH
Confidence 99999999999999975 533 33333332222110 11122 12334667899
Q ss_pred HHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 638 SLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++|.+||..||.+||||.++|+||||+...
T Consensus 269 ~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 269 SLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 999999999999999999999999998653
No 29
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-43 Score=399.90 Aligned_cols=266 Identities=27% Similarity=0.425 Sum_probs=222.0
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
...+..+.|+.+++||+|.||.||+|++..+|+.||+|+++.............|||.+|++|+||||+++.+...+.
T Consensus 111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~-- 188 (560)
T KOG0600|consen 111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK-- 188 (560)
T ss_pred ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec--
Confidence 345567899999999999999999999999999999999988776666667889999999999999999999886542
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+|+|||+.+|..++... -.|++++++.|+.||+.||+
T Consensus 189 ------------------------------------~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~ 232 (560)
T KOG0600|consen 189 ------------------------------------LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLE 232 (560)
T ss_pred ------------------------------------CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHH
Confidence 24578999999999999998864 47999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+|||||.+|||||.+|.+||+|||+|+++.... ....|+.+-|.||.|||.|.|...|+
T Consensus 233 ~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--------------~~~~T~rVvTLWYRpPELLLG~t~Yg 298 (560)
T KOG0600|consen 233 YCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--------------SAPYTSRVVTLWYRPPELLLGATSYG 298 (560)
T ss_pred HHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC--------------CcccccceEEeeccChHHhcCCcccc
Confidence 9999999999999999999999999999999999875332 12357889999999999999988999
Q ss_pred ccchhHHHHHHHHHhhc--CC-CchhHHHHHHHHhhhcCCCCC-c-------------------------cccCCHHHHH
Q 001059 588 EKADMYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGELPP-S-------------------------WVAKFSEQES 638 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt--Pf-~~~~~~~~~~~~l~~~~~~p~-~-------------------------~~~~~~e~~~ 638 (1170)
.++|+||.||||.||+. |. .+..+.+.+-.+...-+.... . +...++.+.+
T Consensus 299 ~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~ 378 (560)
T KOG0600|consen 299 TAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALD 378 (560)
T ss_pred cceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHH
Confidence 99999999999999996 44 444444444444333222111 1 1123446679
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+..||+.||.+|.||.++|++.||...
T Consensus 379 Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 379 LLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred HHHHHhccCccccccHHHHhcCcccccC
Confidence 9999999999999999999999999544
No 30
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-42 Score=385.50 Aligned_cols=264 Identities=27% Similarity=0.384 Sum_probs=224.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++..+||.|..++||+|++..++..||||+++...+... .+.+.+|+..|+.++||||++++.+|..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv------- 95 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV------- 95 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe-------
Confidence 46899999999999999999999999999999999998877654 6789999999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||.||. ||+.+++... ..++|..+..+++++++||.||
T Consensus 96 ---------------------------------~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL 142 (516)
T KOG0582|consen 96 ---------------------------------DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL 142 (516)
T ss_pred ---------------------------------cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH
Confidence 467899999996 7999998754 4599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc-ccCCCCCCc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDE 588 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~~~ 588 (1170)
|.+|.||||||+.||||+.+|.|||+|||.+..+.... . . ...+...++|||+|||||+ .+....|+.
T Consensus 143 H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G-~--------R--~~~rf~tfvgtp~wmAPEvl~q~~~GYdf 211 (516)
T KOG0582|consen 143 HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG-D--------R--QVTRFNTFVGTPCWMAPEVLMQQLHGYDF 211 (516)
T ss_pred HhcCceecccccccEEEcCCCcEEEcCceeeeeecccC-c--------e--eeEeeccccCcccccChHHhhhcccCccc
Confidence 99999999999999999999999999999998764322 0 0 0111167799999999999 454456999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-------ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
|+|||||||+..||.+ ||....++..++..+...+..+. .....+..++.+|..||.+||.+|||++++|
T Consensus 212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 212 KADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL 291 (516)
T ss_pred hhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 9999999999999997 99988888888877764433211 1122334678999999999999999999999
Q ss_pred hccCCCCchH
Q 001059 659 QDALPPQMEY 668 (1170)
Q Consensus 659 ~~~~~~~~~~ 668 (1170)
+|+||++...
T Consensus 292 kh~FFk~~k~ 301 (516)
T KOG0582|consen 292 KHAFFKKAKS 301 (516)
T ss_pred ccHHHhhccc
Confidence 9999998753
No 31
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.3e-43 Score=366.54 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=216.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|...++||+|.||.||+|++..||+.||||+|+..+.........+||++.|+.++||||+.++++|-
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~---------- 71 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP---------- 71 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc----------
Confidence 4678889999999999999999999999999999988776667788999999999999999999999882
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+.+|+||++.+|..++.... .++..+++.|+.++++||+|||++.
T Consensus 72 ------------------------------~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~ 121 (318)
T KOG0659|consen 72 ------------------------------HKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW 121 (318)
T ss_pred ------------------------------CCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 245688999999999999997544 5999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||.|+||+.+|.+||+|||+|+.+..+.. ..+..+-|.+|.|||.+-|...|+..+|||
T Consensus 122 IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~---------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmW 186 (318)
T KOG0659|consen 122 ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR---------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMW 186 (318)
T ss_pred hhcccCCccceEEcCCCcEEeecccchhccCCCCc---------------ccccceeeeeccChHHhccchhcCCcchhh
Confidence 99999999999999999999999999998754331 123348899999999999988999999999
Q ss_pred HHHHHHHHhhc--CCCchhH-HHHHHHHhhhcCC--------------------CC-----CccccCCHHHHHHHHHccC
Q 001059 594 SLGIVFFELWH--PFSTAME-RQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 594 SlGviL~ELlt--Pf~~~~~-~~~~~~~l~~~~~--------------------~p-----~~~~~~~~e~~~LI~~~L~ 645 (1170)
|.|||+.||+. ||.+... -+..-.+.+.-+. .| ..++..++++.+|+.+||.
T Consensus 187 avGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ 266 (318)
T KOG0659|consen 187 AVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT 266 (318)
T ss_pred hHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhc
Confidence 99999999985 7765543 2332222221111 11 1233445677899999999
Q ss_pred CCCCCCCCHHHHHhccCCCCch
Q 001059 646 PSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.||.+|+|+.|+|+|+||.+..
T Consensus 267 ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 267 YNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred cCchhcccHHHHhcchhhhcCC
Confidence 9999999999999999888754
No 32
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.7e-43 Score=398.70 Aligned_cols=254 Identities=27% Similarity=0.420 Sum_probs=223.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|.+.+.||+|+||.||||+.+.|.+.||+|.+.+..........+.+|+.+++.++|||||.+++.|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf---------- 70 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF---------- 70 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh----------
Confidence 4689999999999999999999999999999999987777766778899999999999999999999776
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
+....+|+|+|||.|+|..++...+.++++.+..++.|++.||.|||+++
T Consensus 71 ------------------------------Et~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r 120 (808)
T KOG0597|consen 71 ------------------------------ETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR 120 (808)
T ss_pred ------------------------------cccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 23678999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|||+||.|||++..+++|+||||+|+..... ....++..|||.|||||++.+ ..|+..+|+|
T Consensus 121 ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---------------t~vltsikGtPlYmAPElv~e-~pyd~~sDlW 184 (808)
T KOG0597|consen 121 ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---------------TSVLTSIKGTPLYMAPELVEE-QPYDHTSDLW 184 (808)
T ss_pred cccccCCcceeeecCCCceeechhhhhhhcccC---------------ceeeeeccCcccccCHHHHcC-CCccchhhHH
Confidence 999999999999999999999999999975322 122356689999999999997 6799999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+|||+|||++ ||....-.+....++......|+ ..++.+.+|++.+|.+||.+|.|..+++.|||.+..
T Consensus 185 slGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 185 SLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS---TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc---cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 99999999996 88776666666555543333333 667899999999999999999999999999986654
No 33
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=399.91 Aligned_cols=256 Identities=30% Similarity=0.518 Sum_probs=219.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~ 427 (1170)
...+.|.+.+.||+|+||+|++|.+..+|..||||+++..... ....+.+.+|+.+++.++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3457899999999999999999999999999999987654211 134566779999999998 999999998872
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
....+|+|||||. |+|.+.+...+++.+.++++++.||++|+
T Consensus 91 -------------------------------------t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 91 -------------------------------------TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred -------------------------------------cCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 2455999999997 59999999989999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhcc-ccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLK-LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
+|||++||+||||||+|||++.+ +++||+|||++.... .. ....+.+||+.|+|||++.+..
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------GLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------CcccCCCCCcccCCHHHhCCCC
Confidence 99999999999999999999999 999999999998752 11 1235679999999999999965
Q ss_pred -CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 -~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.-+.++||||+||+||.|++ ||...........+......+|.... ++++++|+++||..||.+|+|+.+|+.|
T Consensus 198 ~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 198 TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 34589999999999999997 88886666666665555555665543 7899999999999999999999999999
Q ss_pred cCCCC
Q 001059 661 ALPPQ 665 (1170)
Q Consensus 661 ~~~~~ 665 (1170)
+||+.
T Consensus 276 ~w~~~ 280 (370)
T KOG0583|consen 276 PWFQK 280 (370)
T ss_pred hhhcc
Confidence 99997
No 34
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=403.77 Aligned_cols=287 Identities=26% Similarity=0.377 Sum_probs=236.2
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...+++|.++++||+|+||+|+++..+.+++.||||++++... .....+....|..++... +||.+++++++|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 4568999999999999999999999999999999999987653 334567788898888888 599999999888
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...++|+||||+.|+-..++...+.|+++.++.|+..|+.||+|
T Consensus 439 -----------------------------------QT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~f 483 (694)
T KOG0694|consen 439 -----------------------------------QTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQF 483 (694)
T ss_pred -----------------------------------ccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHH
Confidence 357899999999975334444556789999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||||||||.+|||+|.+|++||+|||+++..-.. ....+++||||.|||||++++ ..|+.
T Consensus 484 LH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~---------------g~~TsTfCGTpey~aPEil~e-~~Yt~ 547 (694)
T KOG0694|consen 484 LHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ---------------GDRTSTFCGTPEFLAPEVLTE-QSYTR 547 (694)
T ss_pred HHhcCceeeecchhheEEcccCcEEecccccccccCCC---------------CCccccccCChhhcChhhhcc-Ccccc
Confidence 99999999999999999999999999999999853100 113567899999999999998 78999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
++|+|||||+||||+. ||.+.++.+..-.++......|.. .+.++.++|+++|.++|++|.. +++|.+|
T Consensus 548 aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 548 AVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 9999999999999995 999999999988888766666654 3459999999999999999985 6899999
Q ss_pred cCCCCchHHHHHHHHHhcCCCCCccchhhhhcccccch
Q 001059 661 ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 698 (1170)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 698 (1170)
|||....|+.+ ..+.+.+|-...+..+.--+-|+++
T Consensus 625 pFFr~i~w~~L--~~r~i~PPf~P~i~~~~D~snFd~e 660 (694)
T KOG0694|consen 625 PFFRSIDWDDL--LNRRIKPPFVPTIKGPEDVSNFDEE 660 (694)
T ss_pred CccccCCHHHH--hhccCCCCCCcccCChhhhcccchh
Confidence 99999997755 3334444433333333333334444
No 35
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-42 Score=398.77 Aligned_cols=256 Identities=31% Similarity=0.508 Sum_probs=228.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC-CCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~-~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..-|++.+.||+|+-|.|.+|+|..||+.+|||+|... ..+......+.+|+-+|+-+.||||+++|++|.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe------- 82 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE------- 82 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-------
Confidence 456789999999999999999999999999999999876 344445567899999999999999999999993
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+|.||++ |.|.+++...+++++.++.+++.||+.|+.|||
T Consensus 83 ---------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH 129 (786)
T KOG0588|consen 83 ---------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCH 129 (786)
T ss_pred ---------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3578999999996 689999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
..+|+||||||+|+|+|..+++||+|||+|..-..+. ...+.||+|.|+|||++.|.++.+.++
T Consensus 130 ~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk----------------lLeTSCGSPHYA~PEIV~G~pYdG~~s 193 (786)
T KOG0588|consen 130 AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK----------------LLETSCGSPHYAAPEIVSGRPYDGRPS 193 (786)
T ss_pred hhcceeccCCchhhhhhcccCEeeeccceeecccCCc----------------cccccCCCcccCCchhhcCCCCCCCcc
Confidence 9999999999999999999999999999998643221 124569999999999999988788999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||+|||||.||+ ||.+.+-+..+.+...+...+|. .+++++++||++||..||.+|.|.++|++|||.....
T Consensus 194 DVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs---~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 194 DVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS---NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC---cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 99999999999998 99988888888888777777774 5678999999999999999999999999999976654
No 36
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.2e-42 Score=371.00 Aligned_cols=267 Identities=27% Similarity=0.395 Sum_probs=218.9
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
+...+.+++|+.+..|++|+||.||+|+++.|++.||+|.++........--.-+||+.+|.+++|||||.+-.+.+-
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG-- 146 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG-- 146 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec--
Confidence 556777899999999999999999999999999999999998765443334467899999999999999999876521
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL 506 (1170)
.....+|||||||..+|..++.... +|...+++.++.|+++|+
T Consensus 147 ------------------------------------~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~gl 190 (419)
T KOG0663|consen 147 ------------------------------------SNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGL 190 (419)
T ss_pred ------------------------------------cccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence 1245689999999999999998765 799999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++.|+||||||+|+|++..|.+||+|||+|+.+..+. -..|..+-|.+|.|||.+.|...|
T Consensus 191 k~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~---------------k~~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 191 KHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL---------------KPYTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred HHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc---------------ccCcceEEEeeecCHHHhcCCccc
Confidence 99999999999999999999999999999999999875432 123667899999999999998899
Q ss_pred CccchhHHHHHHHHHhhc--CC-CchhHHHHHHHHhhhcCC-------------------CCCc--------ccc--CCH
Q 001059 587 DEKADMYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGE-------------------LPPS--------WVA--KFS 634 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt--Pf-~~~~~~~~~~~~l~~~~~-------------------~p~~--------~~~--~~~ 634 (1170)
+.+.||||+|||+.||++ |. .+..+......+...-+. ++.. +.. .+.
T Consensus 256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse 335 (419)
T KOG0663|consen 256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE 335 (419)
T ss_pred CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence 999999999999999996 53 344444433333322111 1110 001 224
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 635 EQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 635 e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+|+..+|..||.+|.||++.|+|.||....
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 557999999999999999999999999998865
No 37
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=392.93 Aligned_cols=249 Identities=33% Similarity=0.482 Sum_probs=210.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE-EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~-vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++.+.+.||.|+||+||+|.|+ |+. ||||++.....+......|.+|+.+|++++|||||+++|+|.++
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~------ 111 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP------ 111 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC------
Confidence 345666677999999999999998 777 99999987665545577899999999999999999999998442
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...++|||||++ |+|.++++. ...++...+..++.||++||.||
T Consensus 112 ---------------------------------~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YL 158 (362)
T KOG0192|consen 112 ---------------------------------PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYL 158 (362)
T ss_pred ---------------------------------CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 115799999997 699999987 56799999999999999999999
Q ss_pred HhCC-ccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-CCCC
Q 001059 510 HGQG-IIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-WPKI 586 (1170)
Q Consensus 510 Hs~g-IiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~~ 586 (1170)
|+++ ||||||||+|||++.++ ++||+|||+++...... ...+...||+.|||||++.+ ...|
T Consensus 159 H~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------~~~~~~~GT~~wMAPEv~~~~~~~~ 223 (362)
T KOG0192|consen 159 HSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------TSMTSVAGTYRWMAPEVLRGEKSPY 223 (362)
T ss_pred hcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc---------------ccccCCCCCccccChhhhcCCCCcC
Confidence 9999 99999999999999997 99999999998653211 12344689999999999995 2579
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+.|+|||||||+||||+| ||......+...... .....|+....+++.+..||.+||+.||.+||++.+|+.
T Consensus 224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 224 TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999999997 999888744444433 355556555558889999999999999999999999986
No 38
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-42 Score=377.06 Aligned_cols=275 Identities=26% Similarity=0.403 Sum_probs=223.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|..++.||+|+||.|+.|.++.+|+.||||++..........++..||+++|+.++|+||+.+++.+..+
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~--------- 93 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP--------- 93 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc---------
Confidence 45557899999999999999999999999999986666667788999999999999999999999876221
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....-..+|+|+|+|+.+|.++++..+.+++..+..+++||++||+|+||.||+
T Consensus 94 --------------------------~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 94 --------------------------SRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred --------------------------cccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 112346789999999999999999988899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|+|++.++.+||||||+|+..... ......|.++-|.+|.|||++.....|+.+.||||+
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLARYLDKF-------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred ccccchhheeeccCCCEEeccccceeecccc-------------CcccchhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 9999999999999999999999999976422 112235788999999999999888889999999999
Q ss_pred HHHHHHhhc--CCCchhH-HH---------------H--------HHHHhhhcCCCC-----CccccCCHHHHHHHHHcc
Q 001059 596 GIVFFELWH--PFSTAME-RQ---------------I--------VLSDLKQKGELP-----PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 596 GviL~ELlt--Pf~~~~~-~~---------------~--------~~~~l~~~~~~p-----~~~~~~~~e~~~LI~~~L 644 (1170)
||||.||++ |..+..+ .. . ....+...+..| ..+++.+|.+.+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999996 3222111 00 0 011112222222 234567789999999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCchHHHHHHHHHhcCCCCCccchhhh
Q 001059 645 SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKV 690 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 690 (1170)
..||.+|+|++|+|+||++ ..++.++|++.+...
T Consensus 295 ~fdP~kRita~eAL~hPYl------------~~~hdp~dEP~~~~~ 328 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPYL------------APYHDPEDEPVCQPI 328 (359)
T ss_pred ccCccccCCHHHHhcChhh------------hhhcCCccCCCCCCC
Confidence 9999999999999999844 456777777755433
No 39
>TIGR00418 thrS threonyl-tRNA synthetase. This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether..
Probab=100.00 E-value=7e-41 Score=412.92 Aligned_cols=349 Identities=12% Similarity=0.039 Sum_probs=274.7
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++. ++.+...++||+|.|++|+.++|||+.|+++
T Consensus 188 ~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sg~~~~~~~emy~~~d~~~~~~~LrP~~~~~i 267 (563)
T TIGR00418 188 IGPGLPFWLPKGATIRNLLEDFVRQKQIKYGYMEVETPIMYDLELWEISGHWDNYKERMFPFTELDNREFMLKPMNCPGH 267 (563)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCcccchhhcceeccCCCceEEEecCCCHHH
Confidence 4789999999999999999999999999999999999999 222 3467788999999999999999999999999
Q ss_pred HHHHHhCC----CCceeEEEecCeEEcCCCCC-----CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHHHHcCCCcc
Q 001059 788 IRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 788 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l~~lgi~~~ 855 (1170)
+|+++.+. ..|+|+||+|+|||+|.... |.|||+|.|+|+||. ...+|+| +|.++.++++.||++.
T Consensus 268 ~~~~~~~~~s~~~lP~rl~~~g~~fR~E~~g~~~Gl~R~reF~q~~~~~~~~-~~~~~~e~~~~i~~~~~~~~~lgl~~- 345 (563)
T TIGR00418 268 FLIFKSSLRSYRDLPLRIAELGYSHRYEQSGELHGLMRVRGFTQDDAHIFCT-EDQIKEEFKNQFRLIQKVYSDFGFSF- 345 (563)
T ss_pred HHHHhCcCCChHHCCceeeEeccccCCCCCcCCcCcccccceEEeeeEEEcC-HHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 99998753 35999999999999995542 667899999999998 5667776 9999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++....- +.++-+..+.
T Consensus 346 ~~~~l~~~~~~----~~~~~~~~~~------------------------------------------------------- 366 (563)
T TIGR00418 346 DKYELSTRDPE----DFIGEDELWE------------------------------------------------------- 366 (563)
T ss_pred EEEEEeCCChh----hhcCCHHHHH-------------------------------------------------------
Confidence 88888852110 0011000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccc-ccceecccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV-EGTLLAVGGRY 1014 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~-~~~~I~~GGRY 1014 (1170)
.....+.. .|+.+|+ .+.+|.+ ||++||+.++|++ ....+..-+.+ .+..+++||||
T Consensus 367 --~~~~~~~~---------------~l~~~~i--~~~~~~~--~g~~y~~~~~f~~-~~~lg~~~~~~t~q~~~~~g~ry 424 (563)
T TIGR00418 367 --KAEAALEE---------------ALKELGV--PYEIDPG--RGAFYGPKIDFAF-KDALGREWQCATVQLDFELPERF 424 (563)
T ss_pred --HHHHHHHH---------------HHHhCCC--ceEEcCC--CcceecceEEEEe-ecCCCCceeeceeeeccCCHhhc
Confidence 00000000 2344555 4677887 9999999999996 43333211111 13458999999
Q ss_pred chh-hhhcccccccccCCCCCCCCce---EEeccHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHH
Q 001059 1015 DYL-LHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAEL 1088 (1170)
Q Consensus 1015 D~L-~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~L 1088 (1170)
|.+ ....|++ ..|++ |||+|+|||+.+|.+. ...+...++.+|+|++.+ +....+|+++|+.|
T Consensus 425 d~~~~~~~g~~----------~~p~ii~~Gfa~gieRli~~l~e~~~~~~p~~~~p~~v~vi~~~-~~~~~~a~~ia~~L 493 (563)
T TIGR00418 425 DLTYVDEDNEE----------KRPVMIHRAILGSIERFIAILLEKYAGNFPLWLAPVQVVVIPVN-ERHLDYAKKVAQKL 493 (563)
T ss_pred CCEEECCCCCE----------EeeEEEEeeccCcHHHHHHHHHHhccCCCCCcCCCceEEEEEcc-chHHHHHHHHHHHH
Confidence 995 5666554 35885 9999999999888421 212223467889999986 66789999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 001059 1089 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1089 R~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~ 1157 (1170)
|+.|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||||++|+|..++++++++.+++
T Consensus 494 R~~Gi~v~~d~~-~~sl~~q~k~A~~~g~~~~iiiG~~E~~~~~v~vk~~~~g~q~~v~~~el~~~i~~ 561 (563)
T TIGR00418 494 KKAGIRVDVDDR-NERLGKKIREAQKQKIPYMLVVGDKEMESLAVNVRTRKGQKLEKMSLDEFLEKLRK 561 (563)
T ss_pred HHcCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEchhhhhCCeEEEEECCCCccceeeHHHHHHHHHh
Confidence 999999998876 67999999999999999999999999999999999999999999999999887754
No 40
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-42 Score=382.47 Aligned_cols=268 Identities=27% Similarity=0.487 Sum_probs=221.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------hhhHHHHHHHHHHHHhccCCCce
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVV 417 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~l~HpnIV 417 (1170)
....+++|++++.||+|.||+|.+|++..+++.||||++.+.... ....+++.+|+.+|++|+|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 445689999999999999999999999999999999999754321 11235789999999999999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC-CCHHHHH
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAW 496 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~ 496 (1170)
+++++.-++ ....+|||+|||...-..+...... +++.+++
T Consensus 172 ~LiEvLDDP--------------------------------------~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar 213 (576)
T KOG0585|consen 172 KLIEVLDDP--------------------------------------ESDKLYLVLEYCSKGEVKWCPPDKPELSEQQAR 213 (576)
T ss_pred EEEEeecCc--------------------------------------ccCceEEEEEeccCCccccCCCCcccccHHHHH
Confidence 999886432 3678999999998544445554555 9999999
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
+|+.+++.||+|||.+|||||||||+|+||+++|++||+|||.+....... ..+........+|||+|||
T Consensus 214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~----------~~~~d~~L~~tvGTPAF~A 283 (576)
T KOG0585|consen 214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS----------DEGSDDQLSRTVGTPAFFA 283 (576)
T ss_pred HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC----------ccccHHHHhhcCCCccccc
Confidence 999999999999999999999999999999999999999999998653221 1111222234689999999
Q ss_pred cccccC---CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 577 PEIEQG---WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 577 PE~l~~---~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
||...+ ....+.+.||||+||+||-|+. ||......+..-+++.....+|.. ....+.+++||++||++||.+
T Consensus 284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhh
Confidence 998876 2335789999999999999984 999998888888887765555543 355678999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 001059 651 RPSATELLQDALPPQM 666 (1170)
Q Consensus 651 RPta~eiL~~~~~~~~ 666 (1170)
|.+..+|..|||..+.
T Consensus 363 Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 363 RITLPDIKLHPWVTRD 378 (576)
T ss_pred eeehhhheecceeccC
Confidence 9999999999997665
No 41
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=381.33 Aligned_cols=261 Identities=34% Similarity=0.529 Sum_probs=213.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|...+.||+|+||.||++.+..+|..+|||.+...... ..+.+.+|+.+|++++|||||+++|.....
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~-------- 86 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSR-------- 86 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccc--------
Confidence 4577889999999999999999999999999998765322 266789999999999999999999753110
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+...++|.|||++ |+|.+++...+ .++++.++.++.||++||+|||++
T Consensus 87 ------------------------------~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 87 ------------------------------ENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ------------------------------cCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0147899999997 69999998877 799999999999999999999999
Q ss_pred CccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
|||||||||+|||++. ++.+||+|||+++...... ..........|||.|||||++.......+++|
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sD 204 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESD 204 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCcccccccccc------------ccccccccccCCccccCchhhcCCCcCCccch
Confidence 9999999999999999 7999999999998764200 01112345789999999999985223346999
Q ss_pred hHHHHHHHHHhhc---CCCc-hhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFST-AMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~-~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||||++.||+| ||.. ....+....+... ...|..+...++++++||.+|+..||.+||||.++|+|||..+..
T Consensus 205 iWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~-~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 205 IWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE-DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred hhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc-CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 9999999999998 6665 2334444444443 345556666788999999999999999999999999999988765
Q ss_pred H
Q 001059 668 Y 668 (1170)
Q Consensus 668 ~ 668 (1170)
.
T Consensus 284 ~ 284 (313)
T KOG0198|consen 284 I 284 (313)
T ss_pred c
Confidence 4
No 42
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=363.82 Aligned_cols=259 Identities=27% Similarity=0.449 Sum_probs=227.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+-+.|++-++||+|.|+.||++.+..+|+.+|+|+|+.+.-+....+++.+|+.+.+.|+|||||++++.+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-------- 79 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-------- 79 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------
Confidence 456789999999999999999999999999999999987776666778999999999999999999998665
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+.|+|+|++.| +|..-+..+--+++..+-.+++||++||.|+|
T Consensus 80 --------------------------------~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 80 --------------------------------QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred --------------------------------cccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235678999999975 78777766667899999999999999999999
Q ss_pred hCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
.+||||||+||+|+|+-+. --+||+|||+|..+.... ...+++|||.|||||++.. ..|+
T Consensus 128 ~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~----------------~~~G~~GtP~fmaPEvvrk-dpy~ 190 (355)
T KOG0033|consen 128 SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE----------------AWHGFAGTPGYLSPEVLKK-DPYS 190 (355)
T ss_pred hcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc----------------ccccccCCCcccCHHHhhc-CCCC
Confidence 9999999999999999543 349999999998765221 1346799999999999998 5699
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
..+|||+.|||||-|+. ||++.+.......+.......|+ .|..+++++++|+++||..||.+|.|+.|.|+|||.
T Consensus 191 kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 191 KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 99999999999999985 99988777777777777777665 999999999999999999999999999999999999
Q ss_pred CCch
Q 001059 664 PQME 667 (1170)
Q Consensus 664 ~~~~ 667 (1170)
.+..
T Consensus 271 ~~r~ 274 (355)
T KOG0033|consen 271 CNRE 274 (355)
T ss_pred cchH
Confidence 8765
No 43
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=389.43 Aligned_cols=253 Identities=24% Similarity=0.430 Sum_probs=214.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|....+||+|+.|.||.|+...+++.||||.+.+.... ..+-+++|+.+|+..+|+|||.+++.|+.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------- 341 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLV--------- 341 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcc---------
Confidence 5677788999999999999999999999999999876654 34568999999999999999999977732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+||||++ |+|.+++.. ..++|.++..++++++.||+|||.+|
T Consensus 342 -------------------------------~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~g 389 (550)
T KOG0578|consen 342 -------------------------------GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARG 389 (550)
T ss_pred -------------------------------cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcc
Confidence 357899999996 577777654 44999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|||||++|||++.+|.+||+|||+|..+..... ..++.+|||+|||||++.. ..|++++|||
T Consensus 390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---------------KR~TmVGTPYWMAPEVvtr-k~YG~KVDIW 453 (550)
T KOG0578|consen 390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---------------KRSTMVGTPYWMAPEVVTR-KPYGPKVDIW 453 (550)
T ss_pred eeeeccccceeEeccCCcEEEeeeeeeeccccccC---------------ccccccCCCCccchhhhhh-cccCccccch
Confidence 99999999999999999999999999998754331 2467799999999999998 6799999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||+++||+- ||....+-.....+..........+...++++++|+.+||+.||.+|++|.++|+|||++..
T Consensus 454 SLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 454 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred hhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 99999999994 77765554444333332222234556788999999999999999999999999999998544
No 44
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-41 Score=371.34 Aligned_cols=279 Identities=25% Similarity=0.394 Sum_probs=232.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-+++|++++.||+|.-|+||+|+.+.++..+|+|++.+.... .....+..-|-+||+.++||.++.+|..|
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-------- 146 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-------- 146 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee--------
Confidence 357899999999999999999999999999999999765432 33455677899999999999999999887
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...++|++||||+ |+|..+++++ +.|+++.++.|+.+++.||+|
T Consensus 147 --------------------------------et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEY 194 (459)
T KOG0610|consen 147 --------------------------------ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEY 194 (459)
T ss_pred --------------------------------eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHH
Confidence 23678999999997 5898888765 459999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccc-cccccC-----------------CCCC-----CCC-------
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQD-----------------AAFP-----TDT------- 558 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~-~~~~~~-----------------~~~~-----~~~------- 558 (1170)
||-.|||+|||||+||||.++|||.|+||-++..... +...+. ..+. ...
T Consensus 195 LHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~ 274 (459)
T KOG0610|consen 195 LHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDE 274 (459)
T ss_pred HHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccc
Confidence 9999999999999999999999999999999976532 111100 0000 000
Q ss_pred -----------CCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhh---cCCCchhHHHHHHHHhhhcCC
Q 001059 559 -----------GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGE 624 (1170)
Q Consensus 559 -----------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~l~~~~~ 624 (1170)
........+++||-.|+|||++.| ...+.++|||+|||++|||+ |||.+....+.+..++.+...
T Consensus 275 ~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~ 353 (459)
T KOG0610|consen 275 SASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK 353 (459)
T ss_pred cccccchhhhcCCCCccccccccccccccceeeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc
Confidence 111234567899999999999999 45899999999999999999 599999999999988887777
Q ss_pred CCCccccCCHHHHHHHHHccCCCCCCCCC----HHHHHhccCCCCchHHHHHH
Q 001059 625 LPPSWVAKFSEQESLLRRLMSPSPSDRPS----ATELLQDALPPQMEYELLDN 673 (1170)
Q Consensus 625 ~p~~~~~~~~e~~~LI~~~L~~dP~~RPt----a~eiL~~~~~~~~~~~~~~~ 673 (1170)
+|... ..+..+++||+++|.+||.+|.. |.+|-+||||+++.|.++..
T Consensus 354 Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~ 405 (459)
T KOG0610|consen 354 FPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRC 405 (459)
T ss_pred CCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheec
Confidence 77654 56679999999999999999998 99999999999999996543
No 45
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.8e-41 Score=367.67 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=218.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...+|++.+.||+|.||+|.+|+....|+.||||.|+... .+..+.-.+.||+++|+.|+||||+++|.+|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-------- 122 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-------- 122 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh--------
Confidence 3568999999999999999999998899999999997654 3444566789999999999999999999887
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+....+.|||||.. |.|++++.+++.+++.+++.|++||++|+.|||
T Consensus 123 --------------------------------ENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCH 170 (668)
T KOG0611|consen 123 --------------------------------ENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCH 170 (668)
T ss_pred --------------------------------cCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHh
Confidence 23577899999995 699999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
.++++|||||.+|||+|.++++||+|||++..+..... .+++||+|.|++||++.|.++-++.+
T Consensus 171 knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf----------------LqTFCGSPLYASPEIvNG~PY~GPEV 234 (668)
T KOG0611|consen 171 KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF----------------LQTFCGSPLYASPEIVNGTPYKGPEV 234 (668)
T ss_pred hccceecccchhheeecCCCCeeeeccchhhhhccccH----------------HHHhcCCcccCCccccCCCCCCCCcc
Confidence 99999999999999999999999999999987653332 25689999999999999987778999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|.|||||+||-|++ ||.+.+-...+.++-+....-|+. +.++.-||++||-.||++|.|+++|-.|=|..
T Consensus 235 DsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 235 DSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET----PSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred chhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC----CchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 99999999999985 998877766666555444333432 34788899999999999999999999996543
No 46
>PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional
Probab=100.00 E-value=6.2e-40 Score=362.70 Aligned_cols=255 Identities=14% Similarity=0.155 Sum_probs=195.0
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceecc----CCCcccccceEE-EeccCCceeeecCCCCHHHHHHHHhCCCCce
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVK-LLTHGGDLLELSHELRLPFIRWAISNQKSSF 799 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~-f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~ 799 (1170)
+.-.++.+++.++++|++|||++|.||+|++. ..++.....+++ |.|.+|+.++||||||+||||+++++...|.
T Consensus 6 ~~~~~~~ie~~l~~~f~~~GY~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~Gr~laLRpD~T~~iAR~~a~~~~~~~ 85 (272)
T PRK12294 6 QLIALKESETAFLKYFNKADYELVDFSVIEKLDWKQLNHEDLQQMGERSFWQHEHQIYALRNDFTDQLLRYYSMYPTAAT 85 (272)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEeeCCcchhHHhhhccccchhhhheeeeecCCCCEEEEcCCCCHHHHHHHHhcCCCCc
Confidence 44567899999999999999999999999322 224344455555 4466899999999999999999987655678
Q ss_pred eEEEecCeEEcCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceE-EEeCcHHHHHHHHHHhCCCHH
Q 001059 800 KRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCD-IHLNHGDLLEAIWSWAGIKAE 878 (1170)
Q Consensus 800 r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~-i~lg~~~il~~~l~~lgl~~~ 878 (1170)
|+||+|+|||++++ ++|+|||+|| .+..+|+|+|.+|.+++..+|..+ +. |.|||+++++++++. ++
T Consensus 86 Rl~Y~g~VfR~~~~------~~Q~GvEliG-~~~~a~~e~l~la~~~l~~~g~~~-~~~i~lGh~~~~~~l~~~----~~ 153 (272)
T PRK12294 86 KVAYAGLIIRNNEA------AVQVGIENYA-PSLANVQQSFKLFIQFIQQQLRDN-VHFVVLGHYQLLDALLDK----SL 153 (272)
T ss_pred eEEEeccEeccCCC------cceeceEEEC-CCchhHHHHHHHHHHHHHHhCCCC-CcEEEeccHHHHHHHHhC----HH
Confidence 99999999998643 8999999999 447999999999999999998765 53 899999999999984 56
Q ss_pred HHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHH
Q 001059 879 HREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALD 958 (1170)
Q Consensus 879 ~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~ 958 (1170)
.++++++++.+||.. ++ ++++... ..+..++.. ....+++++..+........+.|.
T Consensus 154 ~~~~l~~~l~~Kn~~------------~l-~~~l~~~-------~~l~~~l~~---~~~~~l~~a~~l~~~~~~~~~~L~ 210 (272)
T PRK12294 154 QTPDILSMIEERNLS------------GL-VTYLSTE-------HPIVQILKE---NTQQQLNVLEHYIPNDHPALVELK 210 (272)
T ss_pred HHHHHHHHHHhcCHH------------HH-HHHHhhh-------hhHHHHHHh---chHHHHHHHHHhhhhhHHHHHHHH
Confidence 778899999998832 12 2233211 112233321 124567777765543334444555
Q ss_pred HH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhccc
Q 001059 959 EL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1023 (1170)
Q Consensus 959 ~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~ 1023 (1170)
.+ .++..+.. .+.||++++|+++||||+||++|.++.+. +|++|||||+|+++||.
T Consensus 211 ~l~~~l~~~~~~-~i~~Dl~~~r~~~YYTG~vF~~y~~~~~~--------~i~~GGRYD~Ll~~Fg~ 268 (272)
T PRK12294 211 IWERWLHTQGYK-DIHLDITAQPPRSYYTGLFIQCHFAENES--------RVLTGGYYKGSIEGFGL 268 (272)
T ss_pred HHHHHHHhcCCC-eEEEcccccCCCCCcCCeEEEEEECCCCC--------cccCCcCchhHHHhcCC
Confidence 54 56666765 59999999999999999999999987654 69999999999999863
No 47
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.2e-40 Score=372.74 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=214.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------- 71 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc---------
Confidence 478999999999999999999999999999999975432 2234456889999999999999999986652
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+..++|++|||++ ++|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 120 (291)
T cd05612 72 -------------------------------DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK 120 (291)
T ss_pred -------------------------------cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 58999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di 181 (291)
T cd05612 121 EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------TWTLCGTPEYLAPEVIQS-KGHNKAVDW 181 (291)
T ss_pred CeeecCCCHHHeEECCCCCEEEEecCcchhccCC------------------cccccCChhhcCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999864211 123479999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 664 (1170)
|||||++|+|++ ||......+....+......+|. ..++.+++||++||+.||.+||+ ++++++|+|+.
T Consensus 182 wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR---HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc---cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 999999999997 88776665555555444444443 34678999999999999999995 99999999998
Q ss_pred CchHHH
Q 001059 665 QMEYEL 670 (1170)
Q Consensus 665 ~~~~~~ 670 (1170)
...+..
T Consensus 259 ~~~~~~ 264 (291)
T cd05612 259 SVDWDD 264 (291)
T ss_pred CCCHHH
Confidence 877543
No 48
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.8e-40 Score=379.24 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=216.4
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
...+++|++.+.||+|+||.||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++||||++++++|.+
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 89 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD---- 89 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc----
Confidence 3446899999999999999999999999999999999975432 22334678899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|++||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 90 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (329)
T PTZ00263 90 ------------------------------------ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEY 133 (329)
T ss_pred ------------------------------------CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.
T Consensus 134 LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~ 194 (329)
T PTZ00263 134 LHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------TFTLCGTPEYLAPEVIQS-KGHGK 194 (329)
T ss_pred HHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------cceecCChhhcCHHHHcC-CCCCC
Confidence 99999999999999999999999999999999754211 123579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
++|||||||++|||++ ||...........+......+|. ..++.+++||++||+.||.+||+ +++++.|
T Consensus 195 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 195 AVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN---WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred cceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999997 88766555444444433333332 35678999999999999999996 7999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
|||....+..+
T Consensus 272 p~f~~~~~~~~ 282 (329)
T PTZ00263 272 PYFHGANWDKL 282 (329)
T ss_pred CccCCCCHHHH
Confidence 99998765543
No 49
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.8e-39 Score=367.67 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=204.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||.|+||+||+|+++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------- 73 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIH--------- 73 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEc---------
Confidence 57899999999999999999999999999999999754322 22346789999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|+||||++++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 122 (288)
T cd07871 74 -------------------------------TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR 122 (288)
T ss_pred -------------------------------CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 235689999999999999887654 478999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (288)
T cd07871 123 KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDM 187 (288)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------ccccCceecccccChHHhcCCcccCcHHHH
Confidence 99999999999999999999999999997532111 012335789999999998765568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CCC--------ccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~--------~~~~~~~e~~~LI~~ 642 (1170)
||+||++|+|++ ||......+....+....+. .|. .....++++.+||++
T Consensus 188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 267 (288)
T cd07871 188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSS 267 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHH
Confidence 999999999997 77655444333222211111 000 112345688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 001059 643 LMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+.||.+|||++++++||||
T Consensus 268 mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 268 LLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hcCcCcccCCCHHHHhcCCCC
Confidence 999999999999999999997
No 50
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-41 Score=351.82 Aligned_cols=260 Identities=25% Similarity=0.440 Sum_probs=222.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--C----hhhHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--S----LPVNDRILREVATLSRL-QHQHVVRYYQAWF 424 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~--~----~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~ 424 (1170)
.+.+.|+-.+.||+|..++|.+|.++.+|+.+|+|+|..... + .+..+.-.+|+.+|+++ .||||+++++.|.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 345678888999999999999999999999999999975421 1 22334567899999999 6999999998872
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
...++|+|+|.|+ |.|.++|.+.-.+++..+++++.|++
T Consensus 94 ----------------------------------------s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlf 133 (411)
T KOG0599|consen 94 ----------------------------------------SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLF 133 (411)
T ss_pred ----------------------------------------CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHH
Confidence 2457899999998 79999999988999999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 582 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 582 (1170)
+|++|||.++||||||||+|||++++.++||+|||+|+.+..... ....||||+|+|||.+..
T Consensus 134 egVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek----------------LrelCGTPgYLAPEtikC~ 197 (411)
T KOG0599|consen 134 EGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK----------------LRELCGTPGYLAPETIKCS 197 (411)
T ss_pred HHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchh----------------HHHhcCCCcccChhheeee
Confidence 999999999999999999999999999999999999998754431 245699999999998753
Q ss_pred ----CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 ----WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ----~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
.+.|+..+|+||+|||+|.|+. ||+..........+..++..+ .|.|.+++.+.++||.+||+.||.+|.|+
T Consensus 198 m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rita 277 (411)
T KOG0599|consen 198 MYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITA 277 (411)
T ss_pred cccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccH
Confidence 3558999999999999999995 888776666565666555554 57899999999999999999999999999
Q ss_pred HHHHhccCCCCch
Q 001059 655 TELLQDALPPQME 667 (1170)
Q Consensus 655 ~eiL~~~~~~~~~ 667 (1170)
+++|+||||.++.
T Consensus 278 ke~LaHpff~q~~ 290 (411)
T KOG0599|consen 278 KEALAHPFFIQIA 290 (411)
T ss_pred HHHhcChHHHHHH
Confidence 9999999997764
No 51
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-39 Score=369.84 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=206.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||+||+|+++.+|+.||||+++..... .....+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 74 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHT-------- 74 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEec--------
Confidence 36899999999999999999999999999999999754322 223467889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+++|.+.+... ..+++..++.++.||+.||+|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 122 (303)
T cd07869 75 --------------------------------KETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR 122 (303)
T ss_pred --------------------------------CCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3578999999999998887654 5689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (303)
T cd07869 123 YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDM 187 (303)
T ss_pred CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---------------ccCCCCcccCCCCChHHHcCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 112345789999999998775668999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CC-----------------------CCCcc------ccCCHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GE-----------------------LPPSW------VAKFSEQESL 639 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~-----------------------~p~~~------~~~~~e~~~L 639 (1170)
|||||++|||++ ||....+.......+... +. .+..+ ...++++.+|
T Consensus 188 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 267 (303)
T cd07869 188 WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDL 267 (303)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHH
Confidence 999999999997 776543322211111100 00 00000 0123578899
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
|.+||+.||.+|||+.++++||||......
T Consensus 268 i~~mL~~dp~~R~s~~~~l~h~~f~~~~~~ 297 (303)
T cd07869 268 ASKLLQCFPKNRLSAQAALSHEYFSDLPPR 297 (303)
T ss_pred HHHHhccCchhccCHHHHhcCcccccCChh
Confidence 999999999999999999999999887643
No 52
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.2e-39 Score=374.58 Aligned_cols=265 Identities=28% Similarity=0.408 Sum_probs=208.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 72 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------- 72 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC--------
Confidence 489999999999999999999999999999998754333334557889999999999999999998874321
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
......+|+|||||+++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 73 ---------------------------RREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred ---------------------------CCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 01234689999999999999998888899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 594 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwS 594 (1170)
||||||+|||++.++.+||+|||+++....... ........+||+.|+|||++.+. ..++.++||||
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS 193 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTP------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 193 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccC------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHH
Confidence 999999999999999999999999975421110 00112345799999999998652 45899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHH--------------------------HHhhhcCCC--CCccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVL--------------------------SDLKQKGEL--PPSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~--------------------------~~l~~~~~~--p~~~~~~~~e~~~LI~~~ 643 (1170)
|||++|||++ ||.......... ..+...... ...+...++.+.++|.+|
T Consensus 194 lGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (338)
T cd07859 194 IGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERL 273 (338)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHH
Confidence 9999999997 665432211110 000000111 112234567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||++|||++++++||||.+..
T Consensus 274 l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 274 LAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred cCcCcccCCCHHHHhcCchhhhcC
Confidence 999999999999999999998754
No 53
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.7e-39 Score=365.06 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=203.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|+++.+++.||+|+++...........+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR---------- 70 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe----------
Confidence 4799999999999999999999999999999999765544445567889999999999999999998763
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|+||||+++++.+.+. ....+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 71 ------------------------------RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred ------------------------------cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 245789999999876655554 3456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++....... ........||+.|+|||++.+ ..++.++|||
T Consensus 121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diw 185 (287)
T cd07848 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--------------NANYTEYVATRWYRSPELLLG-APYGKAVDMW 185 (287)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccCcccccccc--------------cccccccccccccCCcHHHcC-CCCCCchhHH
Confidence 9999999999999999999999999998653211 001233578999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-------------------C----------ccccCCHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------P----------SWVAKFSEQESLLR 641 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------~----------~~~~~~~e~~~LI~ 641 (1170)
||||++|||++ ||................+..| . .....++++.+||+
T Consensus 186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~ 265 (287)
T cd07848 186 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMK 265 (287)
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHH
Confidence 99999999997 6765443332222111111111 0 01124567899999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||+.||++|||++++|+||||
T Consensus 266 ~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 266 NLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999997
No 54
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.1e-40 Score=376.59 Aligned_cols=253 Identities=33% Similarity=0.554 Sum_probs=221.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+.++++|+|+||.+++++++.+++.||+|+|.....+....+...+|+.++++++|||||.+.+.|++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~------- 75 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED------- 75 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-------
Confidence 5789999999999999999999999999999999998887777777899999999999999999999998653
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+++|+|+||+ |++.+.+.+.. .|+++.++.++.||+.|+.|||
T Consensus 76 --------------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 76 --------------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred --------------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 58998887554 5999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|+|||||+.|||++.++.|||+|||+|+.+..+. ....+.+|||.||+||++.+ -.|+.|+
T Consensus 124 ~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------~~a~tvvGTp~YmcPEil~d-~pYn~KS 187 (426)
T KOG0589|consen 124 ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------SLASTVVGTPYYMCPEILSD-IPYNEKS 187 (426)
T ss_pred hhhhhcccchhhhhhccccCceeecchhhhhhcCCch---------------hhhheecCCCcccCHHHhCC-CCCCccC
Confidence 9999999999999999999999999999999875432 01356799999999999999 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||||++|||++ +|...+......++.... ..|.....+.+++.+|+.||..+|..||++.++|.+|..
T Consensus 188 DiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l 261 (426)
T KOG0589|consen 188 DIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHL 261 (426)
T ss_pred cchhhcchHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence 99999999999997 787777666666666544 445555667899999999999999999999999998643
No 55
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.4e-39 Score=373.01 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=208.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------------- 65 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--------------- 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE---------------
Confidence 369999999999999999999999999975432 2233456789999999999999999998873
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...++|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 66 -------------------------THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred -------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 2457899999997 58999998888899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i 184 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCC---------------CcccceecCccccChhhhcC-CCCCccccCcccchh
Confidence 99999999999999999999987431110 11234579999999999987 568999999999999
Q ss_pred HHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 001059 599 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 670 (1170)
+|||++ ||...........+......+| ...++++.+||++||+.||++|| ++.++++|+||....+..
T Consensus 185 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~ 261 (323)
T cd05571 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQD 261 (323)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 8876555444444443333333 34567999999999999999999 899999999999987653
No 56
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.9e-39 Score=357.54 Aligned_cols=265 Identities=29% Similarity=0.489 Sum_probs=214.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC-ceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn-IV~l~~~~~e~~~~~~~ 432 (1170)
+..|+.+++||+|+||+||+|+.+.+|+.||+|+++........-....||+.+|+.++|+| ||++++.+....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~----- 84 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSN----- 84 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecc-----
Confidence 56788899999999999999999999999999999877554334456789999999999999 999999874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~----~l~e~~~~~i~~qI~~gL~y 508 (1170)
.......+++|+||+..+|..++.... .++...++.+++||+.||+|
T Consensus 85 -----------------------------~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 85 -----------------------------NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred -----------------------------cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 012245789999999999999998755 58888999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||+++|+||||||+||||+.+|.+||+|||+|+...-+. ...++.++|.+|.|||++.|...|+.
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~---------------~~yt~evvTlWYRaPEvLlGs~~Ys~ 200 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM---------------RTYTPEVVTLWYRAPEVLLGSTSYST 200 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc---------------ccccccEEEeeccCHHHhcCCCcCCC
Confidence 999999999999999999999999999999999654221 11356789999999999999778999
Q ss_pred cchhHHHHHHHHHhhc--C-CCchhHHHHHHHHhhhcCCCC-Cc--------------------------cccCCHHHHH
Q 001059 589 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGELP-PS--------------------------WVAKFSEQES 638 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt--P-f~~~~~~~~~~~~l~~~~~~p-~~--------------------------~~~~~~e~~~ 638 (1170)
..||||+|||+.||++ | |.+.++.+....+.+.-+... .. .+...++..+
T Consensus 201 ~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~d 280 (323)
T KOG0594|consen 201 SVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIE 280 (323)
T ss_pred CcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHH
Confidence 9999999999999997 4 444444444443333211110 01 1112246789
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++.+||+.+|.+|.|++.+|.|++|....
T Consensus 281 ll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 281 LLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred HHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 99999999999999999999999988775
No 57
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4.5e-39 Score=373.61 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=215.3
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
....++|++.+.||+|+||.||+|.++.++ ..||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--- 102 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--- 102 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe---
Confidence 345689999999999999999999987655 6899999875432 22345578899999999999999999998733
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|++||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 103 -------------------------------------~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~ 145 (340)
T PTZ00426 103 -------------------------------------ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE 145 (340)
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999996 689999988888999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++++||+|||+++..... ....+||+.|||||++.+ ..++
T Consensus 146 ~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~ 206 (340)
T PTZ00426 146 YLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------TYTLCGTPEYIAPEILLN-VGHG 206 (340)
T ss_pred HHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC------------------cceecCChhhcCHHHHhC-CCCC
Confidence 999999999999999999999999999999999754211 123579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~ 659 (1170)
.++|||||||++|||++ ||...........+......+|+ ..++++.++|++||+.||.+|+ +++++++
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK---FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999999997 88766555444444443333443 3456899999999999999995 8999999
Q ss_pred ccCCCCchHHH
Q 001059 660 DALPPQMEYEL 670 (1170)
Q Consensus 660 ~~~~~~~~~~~ 670 (1170)
||||.+..+..
T Consensus 284 hp~f~~~~~~~ 294 (340)
T PTZ00426 284 HPWFGNIDWVS 294 (340)
T ss_pred CCCcCCCCHHH
Confidence 99999887653
No 58
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-41 Score=374.90 Aligned_cols=253 Identities=28% Similarity=0.455 Sum_probs=214.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|..++.||+|+||.||+|.+..+++.||||++...... ...+++.+|+.+|.++++|||.++|++|+.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~--------- 82 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLK--------- 82 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheee---------
Confidence 3566779999999999999999999999999999876543 345778999999999999999999998843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...++++||||+ |++.+.+.....+++.++..++++++.||.|||+++
T Consensus 83 -------------------------------g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~ 131 (467)
T KOG0201|consen 83 -------------------------------GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK 131 (467)
T ss_pred -------------------------------cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc
Confidence 456899999996 599999998888899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
.+|||||+.|||+..+|.+||+|||.+.++.... ....+++|||.|||||++++ ..|+.|+|||
T Consensus 132 kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---------------~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIW 195 (467)
T KOG0201|consen 132 KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV---------------KRRKTFVGTPFWMAPEVIKQ-SGYDTKADIW 195 (467)
T ss_pred eecccccccceeEeccCcEEEEecceeeeeechh---------------hccccccccccccchhhhcc-ccccchhhhh
Confidence 9999999999999999999999999998764322 12367899999999999996 6799999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||+++||++ |+....++....-+ ....||.. ...++.+++||..||++||+.||+|.++|+|.|.+...
T Consensus 196 SLGITaiEla~GePP~s~~hPmrvlflI---pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 196 SLGITAIELAKGEPPHSKLHPMRVLFLI---PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hhhHHHHHHhcCCCCCcccCcceEEEec---cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 99999999997 77666664332222 22233322 35667899999999999999999999999999887754
No 59
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=9.9e-40 Score=408.64 Aligned_cols=359 Identities=15% Similarity=0.137 Sum_probs=267.8
Q ss_pred ccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC--CcccccceEEEeccCCceeeecC
Q 001059 708 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH 781 (1170)
Q Consensus 708 ~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP 781 (1170)
...+++.+.|++||+|.++.+++.|++.++++|.+|||++|.||+| ++... .+...++||+|.|.+|+.++|||
T Consensus 252 ~~~~~~~~~G~~~~lp~~~~~~~~i~~~~~~~~~~~Gy~ei~tP~le~~~l~~~~g~~~~~~~~my~~~d~~~~~~~LRP 331 (638)
T PRK00413 252 LFHFQEEAPGLPFWHPKGWTIRRELERYIRRKLRKAGYQEVKTPQILDRELWETSGHWDHYRENMFPTTESDGEEYALKP 331 (638)
T ss_pred EEEecCCCCcceEEcccHHHHHHHHHHHHHHHHHHCCCEEEECCeeCCHHHHHhcCChhhhhhccceeecCCCcEEEEec
Confidence 3455677799999999999999999999999999999999999999 33322 35668999999999999999999
Q ss_pred CCCHHHHHHHHhCC----CCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcc-cH-HHHHHHHHHHHHHc
Q 001059 782 ELRLPFIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASAL-TE-AEVLKVTMDIVTRF 850 (1170)
Q Consensus 782 D~T~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~-aD-aEvi~la~~~l~~l 850 (1170)
+.|++++|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++. +| +|+|.++.++++.|
T Consensus 332 ~~~~~~~r~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~~~g~~~~~~~e~~eii~l~~~~~~~l 411 (638)
T PRK00413 332 MNCPGHVQIYKQGLRSYRDLPLRLAEFGTVHRYEPSGALHGLMRVRGFTQDDAHIFCTPEQIEEEVKKVIDLILDVYKDF 411 (638)
T ss_pred CCcHHHHHHHhCcCCChhhCCceeeeccCeecCCCCCCCcCcceeeeeEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998753 3599999999999999986 2 5567999999999998875 46 99999999999999
Q ss_pred CCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 001059 851 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 930 (1170)
Q Consensus 851 gi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 930 (1170)
|+++ ++++||++ . . ..+|.++.+......+ .+.+...+++.+......+
T Consensus 412 g~~~-~~i~l~~r-~-~---~~~g~~~~~~~~~~~l----------------------~~~l~~~g~~~~~~~~~~~--- 460 (638)
T PRK00413 412 GFED-YEVKLSTR-P-E---KRIGSDEMWDKAEAAL----------------------KEALDELGLDYEIAPGEGA--- 460 (638)
T ss_pred CCce-EEEEEecC-C-c---ccCCCHHHHHHHHHHH----------------------HHHHHHcCCCceecCCccc---
Confidence 9985 99999997 2 2 2456554321111111 1111112222111111111
Q ss_pred HhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCC-cccceEEEEEeccCCCcccccccceec
Q 001059 931 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES-YHRNLFFQVFSVKEKYPATLVEGTLLA 1009 (1170)
Q Consensus 931 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgld-YYtG~VFe~~~~~~~~~~~~~~~~~I~ 1009 (1170)
+.|+.. .. .+..++.++ ..+ ..+.+|+++.++++ ||||.+++.
T Consensus 461 -~~~~~~------~~------~~~~~~~~~----~~l-~~~~~d~~~~~~~dl~Yt~~~~~~------------------ 504 (638)
T PRK00413 461 -FYGPKI------DF------QLKDALGRE----WQC-GTIQLDFNLPERFDLTYVGEDGEK------------------ 504 (638)
T ss_pred -cccceE------EE------EeecCCCCe----EEe-ccEeecccChhhcCCEEECCCCCc------------------
Confidence 111100 00 000011111 000 23667777777777 676653211
Q ss_pred cccccchhhhhcccccccccCCCCCCCCce---EEeccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHH
Q 001059 1010 VGGRYDYLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1083 (1170)
Q Consensus 1010 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ 1083 (1170)
..|++ |++-++||++.+|.+ +..+ ...+|.+|+|++.+ +....+|.+
T Consensus 505 -------------------------~~p~~i~~~~~g~~eRli~~l~e~~~~~~p-~~~~p~~v~Ii~~~-~~~~~~a~~ 557 (638)
T PRK00413 505 -------------------------HRPVMIHRAILGSMERFIGILIEHYAGAFP-TWLAPVQVVVLPIT-DKHADYAKE 557 (638)
T ss_pred -------------------------cCcEEEEecceehHHHHHHHHHHHcCCCCC-cccCcceEEEEEeC-hhHHHHHHH
Confidence 13677 677789999988852 3222 22457899999986 667889999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1084 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1084 ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+++.||+.|++|+++.. ++++++++++|++.|+|++|++|++|.++|+|+|||+++++|..++++++++.+++.+++
T Consensus 558 i~~~Lr~~gi~v~~d~~-~~~l~kki~~A~~~g~~~~iiiG~~E~~~~~v~vr~~~~~~q~~i~~~~l~~~i~~~~~~ 634 (638)
T PRK00413 558 VAKKLKAAGIRVEVDLR-NEKIGYKIREAQLQKVPYMLVVGDKEVEAGTVSVRRRGGKDLGTMSLDEFIERLLEEIAS 634 (638)
T ss_pred HHHHHHhCCCEEEEECC-CCCHhHHHHHhhccCCCEEEEEcchhhhcCeEEEEECCCCccceeeHHHHHHHHHHHHhh
Confidence 99999999999998876 679999999999999999999999999999999999999999999999999999887764
No 60
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=9.3e-39 Score=369.59 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=213.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--------- 71 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--------- 71 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE---------
Confidence 479999999999999999999999999999999975432 1223457889999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 120 (333)
T cd05600 72 -------------------------------DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL 120 (333)
T ss_pred -------------------------------cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||++..... .....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv 181 (333)
T cd05600 121 GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------------------YANSVVGSPDYMAPEVLRG-KGYDFTVDY 181 (333)
T ss_pred CccccCCCHHHEEECCCCCEEEEeCcCCccccc------------------ccCCcccCccccChhHhcC-CCCCCccce
Confidence 999999999999999999999999999975421 1234579999999999988 478999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||++|||++ ||......+......... ...|.. ....++++.+||.+||..+|.+||++.++++|+||.
T Consensus 182 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 999999999996 887655544433322211 111211 124577999999999999999999999999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+...
T Consensus 262 ~~~~~~~ 268 (333)
T cd05600 262 EVDWNEL 268 (333)
T ss_pred CCCHHHH
Confidence 8876544
No 61
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-38 Score=373.56 Aligned_cols=276 Identities=26% Similarity=0.437 Sum_probs=214.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--------- 71 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--------- 71 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe---------
Confidence 479999999999999999999999999999999975322 2233456888999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (363)
T cd05628 72 -------------------------------DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL 120 (363)
T ss_pred -------------------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999997 59999998888999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccccccc-----CCCCCCCC------C---------CccccCcccccCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ-----DAAFPTDT------G---------GVSVDGTGQVGTY 572 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~-----~~~~~~~~------~---------~~~~~~~~~~GT~ 572 (1170)
||+||||||+|||++.++++||+|||+++.+....... ....+.+. . .........+||+
T Consensus 121 givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 200 (363)
T cd05628 121 GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTP 200 (363)
T ss_pred CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCc
Confidence 99999999999999999999999999998653211000 00000000 0 0000123468999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCC-
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSP- 646 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~- 646 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.... ..+|+ ....+++++++|.+|+..
T Consensus 201 ~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~~~ 278 (363)
T cd05628 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCCEW 278 (363)
T ss_pred cccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcCCh
Confidence 9999999987 568999999999999999997 887666555554444322 22333 234678999999997752
Q ss_pred -CCCCCCCHHHHHhccCCCCchHHHHH
Q 001059 647 -SPSDRPSATELLQDALPPQMEYELLD 672 (1170)
Q Consensus 647 -dP~~RPta~eiL~~~~~~~~~~~~~~ 672 (1170)
++..||++++|++||||....++.+.
T Consensus 279 ~~r~~r~~~~ei~~hp~f~~~~~~~~~ 305 (363)
T cd05628 279 EHRIGAPGVEEIKTNPFFEGVDWEHIR 305 (363)
T ss_pred hhcCCCCCHHHHhCCCCCCCCCHHHHH
Confidence 23356899999999999999877553
No 62
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-40 Score=339.70 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=222.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..-+++|++.+.||+|-||.||+|+.+.++..||+|++.+... ......++.||+++-+.|+||||+++|++|.+
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd---- 93 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD---- 93 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec----
Confidence 3447899999999999999999999999999999999976542 22345689999999999999999999999843
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHH--hcCCCCHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE--SYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~--~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+++||.+ |++...|. ...++++..++.|+.|++.||
T Consensus 94 ------------------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al 137 (281)
T KOG0580|consen 94 ------------------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANAL 137 (281)
T ss_pred ------------------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHH
Confidence 578899999996 79999998 667799999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
.|+|.++||||||||+|+|++..+.+||+|||.+.... ....++.|||..|.|||...+ ..+
T Consensus 138 ~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----------------~~kR~tlcgt~dyl~pEmv~~-~~h 199 (281)
T KOG0580|consen 138 LYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------SNKRKTLCGTLDYLPPEMVEG-RGH 199 (281)
T ss_pred HHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----------------CCCceeeecccccCCHhhcCC-CCc
Confidence 99999999999999999999999999999999987431 123467899999999999998 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+..+|+|++|++.||++. ||...+..+...++......+| ..++.+++++|.+||.++|.+|.+..+++.|||.
T Consensus 200 d~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 200 DKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred cchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 999999999999999985 8988887777777766666666 4566799999999999999999999999999997
Q ss_pred CCc
Q 001059 664 PQM 666 (1170)
Q Consensus 664 ~~~ 666 (1170)
...
T Consensus 277 ~a~ 279 (281)
T KOG0580|consen 277 VAN 279 (281)
T ss_pred Hhc
Confidence 643
No 63
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.2e-38 Score=373.61 Aligned_cols=273 Identities=25% Similarity=0.407 Sum_probs=212.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--------- 72 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--------- 72 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec---------
Confidence 68999999999999999999999999999999976432 22345678899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 599999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccC----CCC------C----CC------------------CCCc
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD----AAF------P----TD------------------TGGV 561 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~----~~~------~----~~------------------~~~~ 561 (1170)
|+||||||+|||++.++++||+|||+++.+........ ... + .. ....
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ 201 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence 99999999999999999999999999865421110000 000 0 00 0000
Q ss_pred cccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCccccCCHHHH
Q 001059 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQE 637 (1170)
Q Consensus 562 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~e~~ 637 (1170)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+...... ..+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 280 (381)
T cd05626 202 RCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAV 280 (381)
T ss_pred ccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHH
Confidence 001234689999999999987 568999999999999999997 88766555544444332211 1223345678999
Q ss_pred HHHHHccC--CCCCCCCCHHHHHhccCCCCchHH
Q 001059 638 SLLRRLMS--PSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 638 ~LI~~~L~--~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
+||.+|++ .+|..||++.++++|+||....+.
T Consensus 281 dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 281 DLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 99999554 555569999999999999987654
No 64
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1e-38 Score=371.11 Aligned_cols=275 Identities=29% Similarity=0.461 Sum_probs=218.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+|++..+|+.||||+++..... ......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------- 71 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee---------
Confidence 4799999999999999999999999999999999754322 234567889999999999999999997763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 72 -------------------------------DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred -------------------------------cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCC--------------CCCCCCccccCcccccCccCCCcc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF--------------PTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
||+||||||+|||++.++.+||+|||++.............. ...............||+.|+|||
T Consensus 121 giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 999999999999999999999999999986543220000000 000000011223457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh--hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~--~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
++.+ ..++.++|||||||++|||++ ||...........+.. ....+|. ....++++.+||.+||. ||.+||+
T Consensus 201 ~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~~R~~ 277 (350)
T cd05573 201 VLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPEDRLG 277 (350)
T ss_pred HHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-ChhhcCC
Confidence 9988 578999999999999999997 8876665554444433 2223333 23367899999999997 9999999
Q ss_pred -HHHHHhccCCCCchHHHHH
Q 001059 654 -ATELLQDALPPQMEYELLD 672 (1170)
Q Consensus 654 -a~eiL~~~~~~~~~~~~~~ 672 (1170)
++++++|||+....++...
T Consensus 278 s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 278 SFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred CHHHHhcCCCcCCCCHHHHh
Confidence 9999999999998766443
No 65
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.8e-38 Score=357.36 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~ 430 (1170)
++|++.+.||+|+||+||+|++.. +|+.||+|+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~--- 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--- 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEeccc---
Confidence 478999999999999999999854 478899999876544333344567788777766 6999999998874210
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......++++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 --------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 125 (290)
T cd07862 78 --------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125 (290)
T ss_pred --------------------------------CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123568999999999999988753 358999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.
T Consensus 126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 188 (290)
T cd07862 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------MALTSVVVTLWYRAPEVLLQ-SSYAT 188 (290)
T ss_pred HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----------------cccccccccccccChHHHhC-CCCCC
Confidence 99999999999999999999999999999999754211 01234579999999999977 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-C-----------------------CccccCCHHHHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-P-----------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p-----------------------~~~~~~~~e~~~LI~ 641 (1170)
++|||||||++|||++ ||......+....+....+.. + ......++.+++||.
T Consensus 189 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999997 676655544443333211110 0 011234567789999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||+.||++|||+.++|+||||
T Consensus 269 ~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcCCHHHHhcCCCC
Confidence 9999999999999999999997
No 66
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-40 Score=397.73 Aligned_cols=278 Identities=24% Similarity=0.406 Sum_probs=233.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+||+++++||+|+||.|.+++++.|++.||+|++++.... ......|..|-.+|...+.+.|++++.+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--------- 144 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--------- 144 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh---------
Confidence 37999999999999999999999999999999999753322 22345688899999999999999999777
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
++..++|+||||++ |+|..++.+.+++++..|++|+..|+.||.-||+
T Consensus 145 -------------------------------QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~ 193 (1317)
T KOG0612|consen 145 -------------------------------QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHS 193 (1317)
T ss_pred -------------------------------cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999996 5999999999999999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
.|+|||||||+|||||..||+||+|||.|-.+..+. .......+|||.|.|||+|+. .+.|+
T Consensus 194 mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG--------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG 259 (1317)
T KOG0612|consen 194 MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG--------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYG 259 (1317)
T ss_pred ccceeccCCcceeEecccCcEeeccchhHHhcCCCC--------------cEEeccccCCCCccCHHHHHhhcCCccccC
Confidence 999999999999999999999999999998764332 122355699999999999863 25699
Q ss_pred ccchhHHHHHHHHHhh---cCCCchhHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHHHh
Q 001059 588 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~ 659 (1170)
+.||+||+||++|||+ |||+...-.+.+-++... ...+| ....+++++++||+++++. |..|.. ++++-.
T Consensus 260 ~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 260 RECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKN 337 (1317)
T ss_pred CccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhcC-hhhhcccccHHHHHh
Confidence 9999999999999999 599998888877777766 34466 4455899999999999975 777877 999999
Q ss_pred ccCCCCchHHHHHHH----HHhcCCCCCccch
Q 001059 660 DALPPQMEYELLDNI----LRMMHSSEDTSIY 687 (1170)
Q Consensus 660 ~~~~~~~~~~~~~~~----~~~~~~~~d~~~~ 687 (1170)
||||.+..|+.+... ...+.++.|++.+
T Consensus 338 HpFF~g~~W~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 338 HPFFEGIDWDNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred CccccCCChhhhhhcCCCCCCcCCCCCccccc
Confidence 999999999766542 2334455555555
No 67
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.1e-38 Score=371.06 Aligned_cols=275 Identities=28% Similarity=0.465 Sum_probs=215.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------- 71 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--------- 71 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------
Confidence 479999999999999999999999999999999975432 2233456788999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (364)
T cd05599 72 -------------------------------DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL 120 (364)
T ss_pred -------------------------------cCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2467899999996 58999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC---------------CCCCCC--------CccccCcccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA---------------FPTDTG--------GVSVDGTGQV 569 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~---------------~~~~~~--------~~~~~~~~~~ 569 (1170)
||+||||||+|||++.++.+||+|||++..+.......... .+.... .......+.+
T Consensus 121 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (364)
T cd05599 121 GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTV 200 (364)
T ss_pred CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 99999999999999999999999999997653221100000 000000 0000112357
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~ 645 (1170)
||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.......+ +.....++++.+||++||.
T Consensus 201 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~ 279 (364)
T cd05599 201 GTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC 279 (364)
T ss_pred cCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999987 568999999999999999997 7776655554444433222211 2223457899999999997
Q ss_pred CCCCCCCC---HHHHHhccCCCCchHHHH
Q 001059 646 PSPSDRPS---ATELLQDALPPQMEYELL 671 (1170)
Q Consensus 646 ~dP~~RPt---a~eiL~~~~~~~~~~~~~ 671 (1170)
+|.+|++ +.++++|+||....++..
T Consensus 280 -~p~~R~~~~~~~~ll~h~~~~~~~~~~~ 307 (364)
T cd05599 280 -EAERRLGNNGVNEIKSHPFFKGVDWEHI 307 (364)
T ss_pred -CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 9999998 999999999999876643
No 68
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.2e-38 Score=358.28 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=206.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|+..+.||+|+||+||+|.++.+|+.||+|++...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--------- 71 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc---------
Confidence 378899999999999999999999999999998754322 2223467899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++++||||+ ++|.+.+... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05631 72 -------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR 120 (285)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999997 5888777543 358999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05631 121 ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----------------TVRGRVGTVGYMAPEVINN-EKYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------eecCCCCCCCccCHhhhcC-CCCCcccC
Confidence 999999999999999999999999999997542110 1134579999999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHH---HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQ---IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~---~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
||||||++|||++ ||....... .....+. . .........++++.+||++||+.||.+||+ ++++++|
T Consensus 184 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-E-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred chhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-c-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999999997 776543321 1111111 1 111223346679999999999999999997 9999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
|||.+..+..+.
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05631 262 PIFKNINFKRLE 273 (285)
T ss_pred HhhcCCCHHHHH
Confidence 999998766554
No 69
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=368.36 Aligned_cols=258 Identities=30% Similarity=0.512 Sum_probs=224.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~ 428 (1170)
..+...|++.+.||+|.||.||+|+++.+|+.+|+|++++.... ......+.+|+.+|+++. |||||.++++|..
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~--- 107 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED--- 107 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc---
Confidence 44557899999999999999999999999999999999865532 224568999999999998 9999999999833
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||+|. |.|.+.+... .+++..+..++.||+.+++
T Consensus 108 -------------------------------------~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 108 -------------------------------------PDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVK 149 (382)
T ss_pred -------------------------------------CCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHH
Confidence 457899999996 6899988766 4999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
|||+.||+||||||+|+|+... +.+|++|||+|....... .....+|||.|+|||++..
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~----------------~~~~~~Gtp~y~APEvl~~- 212 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE----------------RLHTIVGTPEYVAPEVLGG- 212 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc----------------eEeeecCCccccCchhhcC-
Confidence 9999999999999999999653 479999999999764311 2355799999999999997
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..|+..+||||+||++|.|++ ||....+......+......++ +.|..++..++++|++||..||.+|+|+.++|+
T Consensus 213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 569999999999999999986 9999888888888877666654 578888999999999999999999999999999
Q ss_pred ccCCCCc
Q 001059 660 DALPPQM 666 (1170)
Q Consensus 660 ~~~~~~~ 666 (1170)
|||....
T Consensus 293 HpWi~~~ 299 (382)
T KOG0032|consen 293 HPWIKSI 299 (382)
T ss_pred CccccCC
Confidence 9997765
No 70
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.1e-38 Score=363.40 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=206.2
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+|+++.+++.||+|+++... ........+.+|+.+|+.++||||++++++|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----------------- 63 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ----------------- 63 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----------------
Confidence 799999999999999999999999997532 22334567889999999999999999998773
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+|+|||||+ ++|.+++.....+++..+..++.||+.||+|||++||+|||||
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 64 -----------------------SPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred -----------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 2457899999997 5999999888889999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ 184 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDD---------------DKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLLY 184 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCC---------------CccccccCCcccCCHHHHcC-CCCCCccceechhHHHH
Confidence 999999999999999999987532110 01234579999999999987 56899999999999999
Q ss_pred Hhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchHH
Q 001059 601 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYE 669 (1170)
Q Consensus 601 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~ 669 (1170)
||++ ||......+...........+| ...++++.+||.+||+.||.+|| ++.++++||||.+..+.
T Consensus 185 el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~ 256 (312)
T cd05585 185 EMLTGLPPFYDENVNEMYRKILQEPLRFP---DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWK 256 (312)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHH
Confidence 9997 8876655555544444333333 34567899999999999999997 58999999999987543
No 71
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.4e-38 Score=372.60 Aligned_cols=275 Identities=27% Similarity=0.447 Sum_probs=212.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|.++.+|+.||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-------- 72 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-------- 72 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--------
Confidence 479999999999999999999999999999999865322 22334578889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~ 120 (377)
T cd05629 73 --------------------------------AQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL 120 (377)
T ss_pred --------------------------------CCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccccccc--------CCCCCC---------CCC---------------C
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ--------DAAFPT---------DTG---------------G 560 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~--------~~~~~~---------~~~---------------~ 560 (1170)
||+||||||+|||++.++.+||+|||+++.+....... ...... ... .
T Consensus 121 givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T cd05629 121 GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKN 200 (377)
T ss_pred CeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc
Confidence 99999999999999999999999999997432211000 000000 000 0
Q ss_pred ccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHH
Q 001059 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQ 636 (1170)
Q Consensus 561 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~ 636 (1170)
......+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+......+. +.....++++
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 279 (377)
T cd05629 201 RRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEA 279 (377)
T ss_pred ccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHH
Confidence 0001123579999999999987 568999999999999999997 7766555444443332111111 2233467899
Q ss_pred HHHHHHccCCCCCCC---CCHHHHHhccCCCCchHHHH
Q 001059 637 ESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELL 671 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~R---Pta~eiL~~~~~~~~~~~~~ 671 (1170)
++||.+||. +|.+| +++.++++|+|+....++.+
T Consensus 280 ~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 280 EDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred HHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 999999998 66665 69999999999998876554
No 72
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-39 Score=368.42 Aligned_cols=243 Identities=29% Similarity=0.459 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.+.+++.||+|.||+||+|.+. ....||+|.++....+ .+.|.+|+++|++|+|+|||+++++|..
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~--------- 272 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTK--------- 272 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEec---------
Confidence 45677889999999999999997 3348999999865333 4678999999999999999999999833
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+||||||++ |+|.++|.. ...+..++.+.++.|||+||+||++
T Consensus 273 -------------------------------~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes 321 (468)
T KOG0197|consen 273 -------------------------------QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES 321 (468)
T ss_pred -------------------------------CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh
Confidence 236899999997 899999986 4569999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+++|||||-.+|||++++..+||+|||+|+....+.+.. ..+..-..-|.|||++.. ..++.|||
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~--------------~~~~kfPIkWtAPEa~~~-~~FS~kSD 386 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA--------------SEGGKFPIKWTAPEALNY-GKFSSKSD 386 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCceee--------------cCCCCCCceecCHHHHhh-CCcccccc
Confidence 999999999999999999999999999999544332211 112233457999999987 67999999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
||||||+||||+| |+......+. +..+. .+...+.+..+++++.++|..||..+|++|||++.+.
T Consensus 387 VWSFGVlL~E~fT~G~~py~~msn~ev-~~~le-~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 387 VWSFGVLLWELFTYGRVPYPGMSNEEV-LELLE-RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred eeehhhhHHHHhccCCCCCCCCCHHHH-HHHHh-ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 9999999999997 6655554444 44444 4444445567889999999999999999999999665
No 73
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3e-38 Score=378.96 Aligned_cols=258 Identities=23% Similarity=0.342 Sum_probs=202.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++|||||+++++|.....
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~------ 133 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECF------ 133 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccc------
Confidence 57999999999999999999999999999999885322 234579999999999999999987743210
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.......++++|||||+++|.+++. ....+++..++.++.||+.||+|||
T Consensus 134 --------------------------~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 134 --------------------------KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred --------------------------ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0011235688999999998877764 3456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++||+||||||+|||++.++ .+||+|||+|+.+.... .....+||+.|+|||++.+...|+.+
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 251 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------RSVSYICSRFYRAPELMLGATNYTTH 251 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC----------------CcccCCCCcCccCHHHhcCCCCCCcH
Confidence 99999999999999999665 69999999998653211 12345789999999998775568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CCC---------ccccCCHHHHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LPP---------SWVAKFSEQESLL 640 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p~---------~~~~~~~e~~~LI 640 (1170)
+|||||||++|||++ ||......+....++...+. +|. .....++++.+||
T Consensus 252 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li 331 (440)
T PTZ00036 252 IDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFI 331 (440)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHH
Confidence 999999999999997 77655444333333221110 110 0112456899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||+.||.+|||+.++|+||||...
T Consensus 332 ~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 332 SQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHCCCChhHCcCHHHHhCChhHHhh
Confidence 99999999999999999999998654
No 74
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.2e-38 Score=364.59 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=207.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||.||+|+++.+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------------- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------------- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------------
Confidence 369999999999999999999999999975432 2234467889999999999999999998773
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+|+||||++ ++|...+.....+++.+++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 66 -------------------------TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred -------------------------cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2457899999997 58988888888899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvi 184 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDA---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcc---------------cccccccCCcCccChhhhcC-CCCCccCCccccchH
Confidence 99999999999999999999987532110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 001059 599 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 670 (1170)
+|+|++ ||......+....+......+|. ..++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 185 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~ 261 (328)
T cd05593 185 MYEMMCGRLPFYNQDHEKLFELILMEDIKFPR---TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQD 261 (328)
T ss_pred HHHHhhCCCCCCCCCHHHHHHHhccCCccCCC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999997 88765555444444333333333 4567999999999999999997 899999999999877653
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.9e-38 Score=364.15 Aligned_cols=251 Identities=26% Similarity=0.372 Sum_probs=208.2
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------------- 66 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------------- 66 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--------------
Confidence 369999999999999999999999999975322 22334567889999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 357899999997 58988888888899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 184 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCC---------------CccccccCCcCcCCcccccC-CCCCchhchhhhHHH
Confidence 99999999999999999999987431110 01134579999999999987 568999999999999
Q ss_pred HHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 001059 599 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 670 (1170)
+|||++ ||..................+|. ..++++.+||.+||+.||.+|| ++.++++|+||.+..+..
T Consensus 185 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~ 261 (323)
T cd05595 185 MYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 261 (323)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 88766555544444433333443 4567999999999999999998 999999999999887553
No 76
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-40 Score=371.60 Aligned_cols=256 Identities=26% Similarity=0.385 Sum_probs=214.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++..||.|+||+||+|.++.++-..|.|+|.. .+.+..++++-|+.+|+.+.||+||+++++|+-
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------- 100 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------- 100 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc---------
Confidence 467899999999999999999999999999999864 445677889999999999999999999988742
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCc-HHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gs-L~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+||..|||+|+ ...++- -...+++.++..+++|++.||.|||++
T Consensus 101 -------------------------------enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~ 149 (1187)
T KOG0579|consen 101 -------------------------------ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ 149 (1187)
T ss_pred -------------------------------cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc
Confidence 45789999999864 444443 455799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
+|||||||..|||++-+|.++|+|||.+....... -...+++|||+|||||+... ...|+.
T Consensus 150 ~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~---------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDy 214 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR---------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDY 214 (1187)
T ss_pred chhhhhccccceEEEecCcEeeecccccccchhHH---------------hhhccccCCcccccchheeeccccCCCchh
Confidence 99999999999999999999999999987543211 12356899999999998754 245999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||+|.||.. |.....++...+++....++..-.+...+..+.+|+++||.+||..||++.++|+|||+.+
T Consensus 215 kaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 215 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred hhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 9999999999999985 6667777777777776554433344455568999999999999999999999999999986
Q ss_pred ch
Q 001059 666 ME 667 (1170)
Q Consensus 666 ~~ 667 (1170)
..
T Consensus 295 ~~ 296 (1187)
T KOG0579|consen 295 AP 296 (1187)
T ss_pred CC
Confidence 54
No 77
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.5e-38 Score=367.02 Aligned_cols=260 Identities=28% Similarity=0.385 Sum_probs=205.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK----- 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 468999999999999999999999999999999999755444445667889999999999999999998874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++|||++++|.+.+.. .+++..+..++.||+.||+|||++
T Consensus 94 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 142 (359)
T cd07876 94 -----------------------------SLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSA 142 (359)
T ss_pred -----------------------------CccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0112346899999999988887643 488999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ...+...||+.|+|||++.+ ..++.++||
T Consensus 143 ~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 205 (359)
T cd07876 143 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 205 (359)
T ss_pred CcccCCCCHHHEEECCCCCEEEecCCCccccccC----------------ccCCCCcccCCCCCchhccC-CCCCcchhh
Confidence 9999999999999999999999999999753211 01234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhh----------------------hcCCCCC-----------------ccc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLK----------------------QKGELPP-----------------SWV 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~----------------------~~~~~p~-----------------~~~ 630 (1170)
|||||++|+|++ ||.............. .....+. ...
T Consensus 206 wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
T cd07876 206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK 285 (359)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc
Confidence 999999999997 7764432221111100 0111100 001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
..++++++||.+||+.||++|||+.++|+|||+..
T Consensus 286 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 286 LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 12457899999999999999999999999999864
No 78
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-38 Score=372.27 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=200.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++++.||+|+||.||+|++..+++.||+|... ...+.+|+.+|+.++||||++++++|..
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~------ 154 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTY------ 154 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEE------
Confidence 34568999999999999999999999999999999653 2346789999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....+++||++.++|..++.....+++..++.++.||+.||+|||+
T Consensus 155 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~ 200 (391)
T PHA03212 155 ----------------------------------NKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHE 200 (391)
T ss_pred ----------------------------------CCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999999999999888889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+...... .......+||+.|+|||++.+ ..++.++|
T Consensus 201 ~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 265 (391)
T PHA03212 201 NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--------------ANKYYGWAGTIATNAPELLAR-DPYGPAVD 265 (391)
T ss_pred CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc--------------ccccccccCccCCCChhhhcC-CCCCcHHH
Confidence 999999999999999999999999999997532110 001234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchh-------HHHHHHHHhhhcCC--------------------------CC---Ccc---
Q 001059 592 MYSLGIVFFELWH---PFSTAM-------ERQIVLSDLKQKGE--------------------------LP---PSW--- 629 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~-------~~~~~~~~l~~~~~--------------------------~p---~~~--- 629 (1170)
||||||++|||++ ||.... .......++...+. .+ +.+
T Consensus 266 iwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (391)
T PHA03212 266 IWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNL 345 (391)
T ss_pred HHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 9999999999997 443211 00111111110110 00 011
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 630 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
...+.++.+||.+||+.||.+|||+.++|+|+||...
T Consensus 346 ~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 346 YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 1234578899999999999999999999999999764
No 79
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.9e-38 Score=370.67 Aligned_cols=272 Identities=25% Similarity=0.426 Sum_probs=212.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|++++.||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--------- 72 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--------- 72 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe---------
Confidence 68999999999999999999999999999999975432 22344578899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 589999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhcccccccc---CC--------CCCCC---------------------CCCc
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ---DA--------AFPTD---------------------TGGV 561 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~---~~--------~~~~~---------------------~~~~ 561 (1170)
|+||||||+|||++.++++||+|||+|+.+....... .. .+... ....
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ 201 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 9999999999999999999999999986432110000 00 00000 0000
Q ss_pred cccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHH
Q 001059 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQE 637 (1170)
Q Consensus 562 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~ 637 (1170)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+....... .+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~ 280 (382)
T cd05625 202 RCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEAS 280 (382)
T ss_pred cccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHH
Confidence 001234579999999999987 568999999999999999997 887666555554444322221 223345678999
Q ss_pred HHHHHccCCCCCCCCC---HHHHHhccCCCCchHH
Q 001059 638 SLLRRLMSPSPSDRPS---ATELLQDALPPQMEYE 669 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~~~~ 669 (1170)
++|.+|+ .+|.+|++ +.++++||||....+.
T Consensus 281 ~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 281 DLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 9999976 59999997 9999999999887654
No 80
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.7e-38 Score=369.49 Aligned_cols=263 Identities=27% Similarity=0.374 Sum_probs=209.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||+||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 72 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-------- 72 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCC--------
Confidence 578899999999999999999999999999998654444344567899999999999999999998873321
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
......+|++|||++++|.+.+.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 73 ---------------------------IDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred ---------------------------ccccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 00123689999999999999988888899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.+||+|||+++...... ....+...+|+.|+|||++.+...++.++|||||
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 191 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSV 191 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCc--------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhH
Confidence 99999999999999999999999998542111 0112345789999999999875568999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhh----------------------hcCCCCC-------ccccCCHHHHHHHHHc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLK----------------------QKGELPP-------SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~----------------------~~~~~p~-------~~~~~~~e~~~LI~~~ 643 (1170)
||++|||++ ||...........+.. .....++ .....++++.+||.+|
T Consensus 192 G~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 271 (372)
T cd07853 192 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRM 271 (372)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHh
Confidence 999999997 7765443322211111 1111111 1123467889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||.+|||+.++++|||+....
T Consensus 272 L~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 272 LVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred CCCChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999999998764
No 81
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-39 Score=352.32 Aligned_cols=255 Identities=28% Similarity=0.426 Sum_probs=205.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+..+++|.|+||.||+|....+++.||||+.-.... --.+|+++|+.++|||||++..+|..+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~-------- 90 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSST-------- 90 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecC--------
Confidence 57788999999999999999999999999998753221 2347999999999999999998885431
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
. .+..++.+||||+|.+|.+.++. ..+++.-.++-|++||++||+|||+
T Consensus 91 --------------------------~-~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 91 --------------------------E-SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred --------------------------C-CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 0 12457789999999999999875 4678888999999999999999999
Q ss_pred CCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 512 QGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
.||+||||||+|+|+|.+ |.+||||||.|+.+...+ ...++.-|..|.|||.+.|...|+.+.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e----------------pniSYicSRyYRaPELifga~~Yt~~I 207 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE----------------PNISYICSRYYRAPELIFGATEYTTSI 207 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC----------------CceeEEEeccccCHHHHcCccccCcee
Confidence 999999999999999987 899999999999875433 125667899999999999988999999
Q ss_pred hhHHHHHHHHHhhc--CC-CchhHHHHHHHHhhhcCC-----------------CC----C-----ccccCCHHHHHHHH
Q 001059 591 DMYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGE-----------------LP----P-----SWVAKFSEQESLLR 641 (1170)
Q Consensus 591 DIwSlGviL~ELlt--Pf-~~~~~~~~~~~~l~~~~~-----------------~p----~-----~~~~~~~e~~~LI~ 641 (1170)
||||.||++.||+. |. .+.+.......++..-|. .| . .....++++.+|+.
T Consensus 208 DiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~ 287 (364)
T KOG0658|consen 208 DIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLS 287 (364)
T ss_pred EEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHH
Confidence 99999999999995 43 333333333222221110 11 1 12345678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++|..+|.+|.++.++++|+||....
T Consensus 288 ~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 288 KLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhccChhhcCCHHHHhcchhhHHhh
Confidence 99999999999999999999887654
No 82
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=1.3e-37 Score=384.59 Aligned_cols=350 Identities=13% Similarity=0.100 Sum_probs=270.7
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|+.||+|.++.+++.|++.++++|.++||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|+++
T Consensus 194 ~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~Gy~ev~tP~le~~~l~~~sg~~~~~~~~my~~~d~~~~~~~LRP~~~~~~ 273 (575)
T PRK12305 194 IGPGLPVWHPKGAIIRREIEDYLRKEHLKRGYEFVYTPHIGKSDLWKTSGHLDNYKENMFPPMEIDEEEYYLKPMNCPGH 273 (575)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCCcccchhhcccccccCCceEEEecCCCHHH
Confidence 4789999999999999999999999999999999999999 332 3355778999999999999999999888888
Q ss_pred HHHHHhCC----CCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~ 856 (1170)
+|+++++. ..|+|+||+|+|||+|+++ .|.|||+|+|+|+||.++..+| +|+|.++.++++.||+++ +
T Consensus 274 ~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~if~~~~~~~~e~~e~i~l~~~~~~~lgl~~-~ 352 (575)
T PRK12305 274 ILIYKSRLRSYRDLPLRLAEFGTVYRYEKSGVLHGLTRVRGFTQDDAHIFCTPDQIEDEILKVLDFVLELLKDFGFKD-Y 352 (575)
T ss_pred HHHHhcccCChhhCCHhhEEecccccCCCCCCCcCcccccCeEEcceEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-E
Confidence 99988743 3599999999999999885 2567899999999999888887 999999999999999985 9
Q ss_pred EEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCh
Q 001059 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~ 936 (1170)
++.||++.+ ..+ +|-.+.|... .+.+..
T Consensus 353 ~i~l~~r~~-~~~---~g~~~~~~~~---------------------------------------~~~l~~--------- 380 (575)
T PRK12305 353 YLELSTREP-EKY---VGDDEVWEKA---------------------------------------TEALRE--------- 380 (575)
T ss_pred EEEEeCCCh-hhc---cCCHHHHHHH---------------------------------------HHHHHH---------
Confidence 999999765 221 2322111000 000000
Q ss_pred hhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEec-cCCCccccccccee----ccc
Q 001059 937 DQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSV-KEKYPATLVEGTLL----AVG 1011 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~-~~~~~~~~~~~~~I----~~G 1011 (1170)
.+...|+. ...+.+ +.+||. ..|++... ..+.. -+.+++ ..|
T Consensus 381 ------------------------~l~~~g~~--~~~~~~---~~~~y~-~~~~~~~~d~~g~~---~~~~t~~~~~~~~ 427 (575)
T PRK12305 381 ------------------------ALEELGLE--YVEDPG---GAAFYG-PKIDVQIKDALGRE---WQMSTIQLDFNLP 427 (575)
T ss_pred ------------------------HHHhcCCC--cEecCC---Cccccc-ccEEEEeeccCCCc---eeccceeeecccH
Confidence 11222332 234444 778885 55777443 22321 111223 356
Q ss_pred cccch-hhhhcccccccccCCCCCCCCce---EEeccHHHHHhhccC--CCCCCCCCCCceEEEEEcCCCccHHHHHHHH
Q 001059 1012 GRYDY-LLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV--DFKPVRNEAGTSVLVCSRGGGGLLVERMELV 1085 (1170)
Q Consensus 1012 GRYD~-L~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~~--~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia 1085 (1170)
+|||- +.+ ..|. ...|++ |++-++|||+.+|.+ +...+...+|.+|+|++.+ ++...+|.+++
T Consensus 428 ~~fdl~y~~---------~~~~-~~~p~~ih~~~~G~~eRl~~~l~e~~~~~~p~~~~p~~v~Ii~~~-~~~~~~a~~i~ 496 (575)
T PRK12305 428 ERFDLEYTA---------EDGK-RQRPVMIHRALFGSIERFIGILTEHYAGAFPFWLAPVQVVIIPVA-DAHNEYAEEVA 496 (575)
T ss_pred hhCCCEEEC---------CCCC-ccCceEEEccccccHHHHHHHHHHHhCCCCCCCCCCccEEEEEeC-hHHHHHHHHHH
Confidence 89994 422 2222 235888 777789999999853 2222222567899999996 66788999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1086 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1086 ~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.||+.|++|++++. +.++++++++|++.|+|++|++|++|.++|+|+||||.+++|..++++++++.|++.+++
T Consensus 497 ~~Lr~~gi~v~~d~~-~~~l~kk~~~A~~~g~p~~iivG~~E~~~~~v~vr~~~~~~q~~v~~~~l~~~l~~~~~~ 571 (575)
T PRK12305 497 KKLRAAGIRVEVDTS-NERLNKKIRNAQKQKIPYMLVVGDKEVEAGTVSVRTRDGEQLNGMPLDEFIELIKEKIAE 571 (575)
T ss_pred HHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEechhhhCCEEEEEEcCCCceeeeeHHHHHHHHHHHHhc
Confidence 999999999998876 678999999999999999999999999999999999999999999999999999888765
No 83
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.4e-38 Score=371.11 Aligned_cols=275 Identities=24% Similarity=0.406 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||+++++.|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-------- 72 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-------- 72 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--------
Confidence 479999999999999999999999999999999864322 11234568899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (376)
T cd05598 73 --------------------------------KDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM 120 (376)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccccccc---------C--CCCCCC-----------------CCCcccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ---------D--AAFPTD-----------------TGGVSVD 564 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~---------~--~~~~~~-----------------~~~~~~~ 564 (1170)
||+||||||+|||++.++.+||+|||+|..+....... . ...+.. .......
T Consensus 121 ~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (376)
T cd05598 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCL 200 (376)
T ss_pred CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccc
Confidence 99999999999999999999999999986432100000 0 000000 0000011
Q ss_pred CcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHH
Q 001059 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLL 640 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI 640 (1170)
..+.+||+.|||||++.+ ..++.++|||||||++|||++ ||......+....+....... .+.....++++.++|
T Consensus 201 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 279 (376)
T cd05598 201 AHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLI 279 (376)
T ss_pred ccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHH
Confidence 234689999999999987 568999999999999999997 887666554444333222221 223345678999999
Q ss_pred HHccCCCCCCCC---CHHHHHhccCCCCchHHHH
Q 001059 641 RRLMSPSPSDRP---SATELLQDALPPQMEYELL 671 (1170)
Q Consensus 641 ~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~ 671 (1170)
.+|+ .+|.+|+ ++.++++|+||....+...
T Consensus 280 ~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 280 LRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 9976 5999999 9999999999999876543
No 84
>PRK12444 threonyl-tRNA synthetase; Reviewed
Probab=100.00 E-value=1.2e-37 Score=388.03 Aligned_cols=352 Identities=12% Similarity=0.073 Sum_probs=277.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+...|+++|+|.+..+++.|++.+++.+.++||++|.||+| ++. ++.+.+.++|| +.|.+|+.++|||+.|++
T Consensus 261 ~~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sG~~~~~~~emy-~~d~~~~~~~LrP~~~~~ 339 (639)
T PRK12444 261 EEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSGHWDHYKDNMY-FSEVDNKSFALKPMNCPG 339 (639)
T ss_pred cccCcceEEeeCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCChhhhhhhcC-eecCCCcEEEEccCCCHH
Confidence 45789999999999999999999999999999999999999 222 33557789999 889999999999999999
Q ss_pred HHHHHHhC----CCCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHHHHcCCCc
Q 001059 787 FIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 787 iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l~~lgi~~ 854 (1170)
++|++... +..|+|+||+|+|||+|+++ + |.|+|+|.|+++||..+. +++| ++.++.++++.||++
T Consensus 340 ~~~~~~~~~~sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~f~~~~~-~~~e~~~~~~~~~~i~~~lgl~- 417 (639)
T PRK12444 340 HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPDQ-IEDEIKSVMAQIDYVYKTFGFE- 417 (639)
T ss_pred HHHHHhCcccChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEEECCHHH-HHHHHHHHHHHHHHHHHHcCCc-
Confidence 99988653 23599999999999999876 3 566799999999998766 6666 999999999999993
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
+.+.++++. -+.+|-++.|.... +.+..
T Consensus 418 -~~~~~~~r~-----~~~~G~~e~~~~~~---------------------------------------~~l~~------- 445 (639)
T PRK12444 418 -YEVELSTRP-----EDSMGDDELWEQAE---------------------------------------ASLEN------- 445 (639)
T ss_pred -EEEEEECCc-----cccCCCHHHHHHHH---------------------------------------HHHHH-------
Confidence 999998852 12234332221100 00000
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
.|...|+ .+.+|++ ||. || |++|++.....+ .+...|+||||
T Consensus 446 --------------------------~l~~~~~--~y~~~~~--~ga-~Y-~~~~e~~~~~~~------~~~~~~~t~~~ 487 (639)
T PRK12444 446 --------------------------VLQSLNY--KYRLNEG--DGA-FY-GPKIDFHIKDAL------NRSHQCGTIQL 487 (639)
T ss_pred --------------------------HHHHcCC--CceeccC--Ccc-cc-cceEEEEeecCC------CChhcccceee
Confidence 2333444 3677877 888 99 999999876432 23479999999
Q ss_pred ch-hhhhcccccccccCCCCCCCCceE---EeccHHHHHhhccC--CCCCCCCCCCceEEEEEcCCC-ccHHHHHHHHHH
Q 001059 1015 DY-LLHRMWDREYVGYASRTNPPSGVG---ASLALETIIQHYPV--DFKPVRNEAGTSVLVCSRGGG-GLLVERMELVAE 1087 (1170)
Q Consensus 1015 D~-L~~~fg~~~~~~~~g~~~~~pAvG---faiglerL~~~L~~--~~~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~ 1087 (1170)
|. |.++|+-. +....| +...|++| |+.++|||+.+|.+ +...+...+|.+|+|++.+ + ....+|+++++.
T Consensus 488 d~~~~~~f~l~-~~~~~g-~~~~P~i~~~~~~g~ieRli~~L~e~~~~~~p~~~ap~qV~Ii~~~-~~~~~~~a~~la~~ 564 (639)
T PRK12444 488 DFQMPEKFDLN-YIDEKN-EKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWLAPVQVKVIPVS-NAVHVQYADEVADK 564 (639)
T ss_pred ecccccccceE-EECCCC-CccccEEEEECCCCCHHHHHHHHHHhcCCCCCCccCCceEEEEEcc-cHHHHHHHHHHHHH
Confidence 99 33444321 122233 23479999 77799999988742 1222223468899999986 5 578899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1088 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1088 LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
||+.|++|+++.. ++++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++.+.+.+++
T Consensus 565 LR~~Gi~veid~~-~~sl~kq~k~A~k~g~~~~iiiG~~E~~~~~v~vr~~~t~~q~~i~l~el~~~l~~~~~~ 637 (639)
T PRK12444 565 LAQAGIRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEKSEVIELDMFVESIKEEIKN 637 (639)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCeEEEEECCCCceeeeeHHHHHHHHHHHhhc
Confidence 9999999998876 689999999999999999999999999999999999999999999999999999877664
No 85
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=5.2e-38 Score=362.75 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=213.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-------- 72 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-------- 72 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--------
Confidence 479999999999999999999999999999999975432 22344568889999999999999999987732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 120 (330)
T cd05601 73 --------------------------------KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ 120 (330)
T ss_pred --------------------------------CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999998876 679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-----CCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-----WPKI 586 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~~ 586 (1170)
+||+||||||+|||++.++.+||+|||++..+..... .......||+.|+|||++.. ...+
T Consensus 121 ~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (330)
T cd05601 121 MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTY 186 (330)
T ss_pred CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--------------eeeecccCCccccCHHHhccccccccCCC
Confidence 9999999999999999999999999999986532110 01123479999999999863 2457
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|||++ ||...........+...... ..+.....++++.+||.+||+ +|.+|||+.++++|||
T Consensus 187 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 899999999999999997 88765554444433322211 112233567899999999998 9999999999999999
Q ss_pred CCCchHHHHHH
Q 001059 663 PPQMEYELLDN 673 (1170)
Q Consensus 663 ~~~~~~~~~~~ 673 (1170)
+....+..+..
T Consensus 266 ~~~~~~~~~~~ 276 (330)
T cd05601 266 FSKIDWNNIRN 276 (330)
T ss_pred cCCCCHHHHhh
Confidence 99987765543
No 86
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.4e-37 Score=351.12 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=199.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|++.+.||+|+||+||+|+++.+|+.||+|.++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~----- 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR----- 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc-----
Confidence 48899999999999999999999999999999976543333334566777777665 7999999998874320
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......++++|||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 76 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 76 ------------------------------TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ------------------------------CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124568999999999999988764 34899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++...... ..+...||+.|+|||++.+ ..++.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM----------------ALTPVVVTLWYRAPEVLLQ-STYATPV 188 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcc----------------cCCCccccccccCchHhhC-CCCCCcc
Confidence 9999999999999999999999999999998653111 1133578999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------CCC--------CccccCCHHHHHHHHHc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELP--------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p--------~~~~~~~~e~~~LI~~~ 643 (1170)
|||||||++|+|++ ||...........+....+ ... ......+..+.++|.+|
T Consensus 189 DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 189 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred hhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 99999999999996 5554433332222211100 000 01123456788999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+|||+.++++||||
T Consensus 269 L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hccCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
No 87
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.8e-37 Score=358.68 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=207.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||.||+|+++.+|..||+|++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--------
Confidence 478999999999999999999999999999999987542 33445679999999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.....+++..+..++.|++.||.|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 75 --------------------------------DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred --------------------------------CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 356899999997 59999998888899999999999999999999986
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 184 (331)
T cd06649 123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (331)
T ss_pred CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-----------------ccccCCCCcCcCCHhHhcC-CCCCchHh
Confidence 6999999999999999999999999998754211 1133579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhh---------------------------------------------cC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQ---------------------------------------------KG 623 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~---------------------------------------------~~ 623 (1170)
||||||++|||++ ||......+.. ..+.. ..
T Consensus 185 iwslG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd06649 185 IWSMGLSLVELAIGRYPIPPPDAKELE-AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE 263 (331)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHH-HHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhC
Confidence 9999999999997 77543322211 10000 00
Q ss_pred CCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 624 ELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 624 ~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..+. .....++++++||.+||..||++|||+.++++|+|+....
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 264 PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0111 1123467899999999999999999999999999987654
No 88
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.5e-38 Score=365.67 Aligned_cols=275 Identities=26% Similarity=0.425 Sum_probs=215.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|.++.+|+.||||+++.... .......+.+|+.++..++||||++++++|.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------- 71 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------- 71 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 479999999999999999999999999999999974321 2234567888999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 120 (360)
T cd05627 72 -------------------------------DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL 120 (360)
T ss_pred -------------------------------cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999997 58999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccC-----CCCCCC------C---------CCccccCcccccCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-----AAFPTD------T---------GGVSVDGTGQVGTY 572 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~-----~~~~~~------~---------~~~~~~~~~~~GT~ 572 (1170)
||+||||||+|||++.++++||+|||++..+........ ...+.. . ........+.+||+
T Consensus 121 givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 200 (360)
T cd05627 121 GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTP 200 (360)
T ss_pred CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCc
Confidence 999999999999999999999999999976532110000 000000 0 00000122458999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||...........+.... ..+|+ ....++++++||.+|+ .|
T Consensus 201 ~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~ 277 (360)
T cd05627 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TD 277 (360)
T ss_pred cccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cC
Confidence 9999999987 568999999999999999997 887666555444443322 22232 2335779999999977 49
Q ss_pred CCCCC---CHHHHHhccCCCCchHHHHH
Q 001059 648 PSDRP---SATELLQDALPPQMEYELLD 672 (1170)
Q Consensus 648 P~~RP---ta~eiL~~~~~~~~~~~~~~ 672 (1170)
|.+|+ ++.++++||||....+..+.
T Consensus 278 p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 305 (360)
T cd05627 278 SENRIGSNGVEEIKSHPFFEGVDWGHIR 305 (360)
T ss_pred hhhcCCCCCHHHHhcCCCCCCCCHHHHh
Confidence 99998 58999999999999877653
No 89
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.2e-37 Score=358.97 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=210.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCC-CceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~Hp-nIV~l~~~~~e~~~~~~~~ 433 (1170)
+|++++.||+|+||.||+|+++.+++.||||++..... .....+.+..|..+++.++|+ +|+++++++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-------- 72 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--------
Confidence 58999999999999999999999999999999975321 223345678899999999775 57778777632
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 73 --------------------------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred --------------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG---------------KTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------CceeeecCCccccChhhhcC-CCCCcccch
Confidence 99999999999999999999999999986421100 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~~ 664 (1170)
|||||++|||++ ||......+....+......+|. ..++++.++|++||..||.+|++. .++++||||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~ 261 (324)
T cd05587 185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR 261 (324)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence 999999999997 88766665555555443333333 456789999999999999999976 8999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+..+
T Consensus 262 ~~~~~~~ 268 (324)
T cd05587 262 RIDWEKL 268 (324)
T ss_pred CCCHHHH
Confidence 8876543
No 90
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.2e-37 Score=363.65 Aligned_cols=261 Identities=28% Similarity=0.391 Sum_probs=206.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc-----
Confidence 468999999999999999999999999999999999765544455677889999999999999999998874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 90 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 90 -----------------------------SLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred -----------------------------cccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346899999999988887753 488999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 201 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 201 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCc----------------cccCCccccCCccCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------------C-----CCC------------ccc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------E-----LPP------------SWV 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------------~-----~p~------------~~~ 630 (1170)
|||||++|+|++ ||............+...+ . .+. ...
T Consensus 202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T cd07874 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281 (355)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccc
Confidence 999999999997 7764433222111111000 0 000 001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
..+.++++||.+||..||.+|||+.++|+|||+...
T Consensus 282 ~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 282 LKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 123567899999999999999999999999999644
No 91
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=7.9e-38 Score=360.05 Aligned_cols=251 Identities=25% Similarity=0.400 Sum_probs=206.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~------------- 67 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT------------- 67 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-------------
Confidence 369999999999999999999999999975321 122345677888888876 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~ 120 (320)
T cd05590 68 ---------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120 (320)
T ss_pred ---------------------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 457899999997 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------KTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGV 184 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------CcccccccCccccCHHHHcC-CCCCCccchhhhHH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH------HHHHhccCCCCchH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQDALPPQMEY 668 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta------~eiL~~~~~~~~~~ 668 (1170)
++|||++ ||......+....+.......|. ..++++.+||++||+.||.+||++ +++++|+||....+
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 185 LLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 9999997 88766665555444433333332 356789999999999999999998 99999999998876
Q ss_pred HH
Q 001059 669 EL 670 (1170)
Q Consensus 669 ~~ 670 (1170)
..
T Consensus 262 ~~ 263 (320)
T cd05590 262 EK 263 (320)
T ss_pred HH
Confidence 54
No 92
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.7e-37 Score=354.97 Aligned_cols=258 Identities=25% Similarity=0.411 Sum_probs=206.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|.+.+.||+|+||+||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 75 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT-------- 75 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--------
Confidence 47899999999999999999999999999999999754322 223467789999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++++|.+.+.... .+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (309)
T cd07872 76 --------------------------------DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123 (309)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35689999999999998886544 489999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 188 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDM 188 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccccceecCCCc---------------cccccccccccccCCHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 011234689999999998765668999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCC--------CccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP--------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p--------~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||......+.........+ ..+ ......++++.+||.+
T Consensus 189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (309)
T cd07872 189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK 268 (309)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence 999999999997 6755443322221111100 001 0112356788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++|+||....
T Consensus 269 ~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 269 FLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998654
No 93
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-37 Score=366.00 Aligned_cols=263 Identities=22% Similarity=0.386 Sum_probs=212.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-------- 113 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-------- 113 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 5799999999999999999999999999999999974321 1223345778999999999999999998773
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
+..++|+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~ 160 (370)
T cd05596 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 589888765 458999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CCCCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~~ 588 (1170)
+||+||||||+|||++.++.+||+|||++........ ......+||+.|+|||++.+. ..++.
T Consensus 161 ~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05596 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM--------------VRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc--------------ccCCCCCCCcCeECHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999976432110 012345799999999998753 23789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 662 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 662 (1170)
++|||||||++|||++ ||...........+....... .+.....++++.+||++||+.+|.+ |+|++++++|+|
T Consensus 227 ~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 9999999999999997 887665554444444322221 1233356789999999999999988 999999999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
+.+..+...
T Consensus 307 ~~~~~~~~~ 315 (370)
T cd05596 307 FKNDQWTFD 315 (370)
T ss_pred cCCCChhhH
Confidence 998766533
No 94
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-37 Score=364.01 Aligned_cols=260 Identities=28% Similarity=0.372 Sum_probs=206.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~----- 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc-----
Confidence 458999999999999999999999999999999999755444445567889999999999999999998763210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 97 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~ 145 (364)
T cd07875 97 -----------------------------SLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145 (364)
T ss_pred -----------------------------cccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhC
Confidence 0112356899999999998887753 488999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ...+...||+.|+|||++.+ ..++.++||
T Consensus 146 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 208 (364)
T cd07875 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 208 (364)
T ss_pred CeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------CcccCCcccCCcCCHHHHhC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC---------------------------------------Cccc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------------------PSWV 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------------------~~~~ 630 (1170)
|||||++|+|++ ||............+...+..+ ....
T Consensus 209 wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (364)
T cd07875 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288 (364)
T ss_pred HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccc
Confidence 999999999997 7765544333222221111000 0001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
...+++++||.+||+.||.+|||+.++|+|||+..
T Consensus 289 ~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 12346789999999999999999999999999864
No 95
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=7.2e-38 Score=363.52 Aligned_cols=260 Identities=26% Similarity=0.408 Sum_probs=205.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.+..+++.||||++............+.+|+.+|+.++||||++++++|....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT------ 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc------
Confidence 46899999999999999999999999999999998754433334566889999999999999999998763211
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.......+|++|++++++|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 88 ----------------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 88 ----------------------------SIENFNEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred ----------------------------cccccCcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 001234579999999999988775 456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++|||
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 200 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 200 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCC------------------CcCCccccccccCchHhcCCccCCchhhhH
Confidence 99999999999999999999999999975421 123457999999999998755689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-----------------------CCCC-----ccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELPP-----SWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p~-----~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||................+ ..+. .+....+.+.+||.+
T Consensus 201 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07878 201 SVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEK 280 (343)
T ss_pred hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHH
Confidence 99999999997 6654332222211111000 0110 112345678899999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||..||.+|||+.++++||||.+.
T Consensus 281 mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 281 MLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HcCCChhhCCCHHHHhcCcchhcc
Confidence 999999999999999999999765
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2e-37 Score=358.19 Aligned_cols=259 Identities=27% Similarity=0.404 Sum_probs=206.8
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||+|+||+||+|++. .+|+.||+|++..... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 5899999999999999999874 4789999999974321 222345678899999999 5999999998773
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 120 (332)
T cd05614 76 -----------------------------------TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEH 120 (332)
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... .......+||+.|||||++.+...++.
T Consensus 121 lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~ 186 (332)
T cd05614 121 LHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE--------------KERTYSFCGTIEYMAPEIIRGKGGHGK 186 (332)
T ss_pred HHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--------------CCccccccCCccccCHHHhcCCCCCCC
Confidence 999999999999999999999999999999997542111 001234579999999999987555889
Q ss_pred cchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 656 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~e 656 (1170)
++|||||||++|||++ ||.... ............. +.....++.+.++|.+||+.||++|| ++++
T Consensus 187 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 187 AVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 9999999999999997 775321 1122222222222 22234567899999999999999999 8899
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
+++|+|+....+...
T Consensus 264 ~l~h~~~~~~~~~~~ 278 (332)
T cd05614 264 IKEHPFFKGLDWEAL 278 (332)
T ss_pred HHcCCCcCCCCHHHH
Confidence 999999998765543
No 97
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.9e-37 Score=357.19 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=211.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+|++.+.||+|+||+||+|+++.+++.||||+++.... .......+..|..++..+ +||+|+++++++..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-------- 72 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--------
Confidence 68999999999999999999999999999999975432 122334567788888777 58889999887732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 120 (323)
T cd05616 73 --------------------------------MDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120 (323)
T ss_pred --------------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05616 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---------------CccccCCCChhhcCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987432110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 664 (1170)
|||||++|||++ ||...........+......+|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~ 261 (323)
T cd05616 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 261 (323)
T ss_pred hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence 999999999997 88766665555555444433443 45679999999999999999997 48999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+...
T Consensus 262 ~~~~~~~ 268 (323)
T cd05616 262 YIDWEKL 268 (323)
T ss_pred CCCHHHH
Confidence 8876543
No 98
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.4e-37 Score=358.12 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=207.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||||+++.... .......+..|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~------------- 67 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT------------- 67 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975321 223345677889988876 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 120 (321)
T cd05591 68 ---------------------------KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120 (321)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 356899999997 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (321)
T cd05591 121 DLKLDNILLDAEGHCKLADFGMCKEGILNG---------------VTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGV 184 (321)
T ss_pred CCCHHHeEECCCCCEEEeecccceecccCC---------------ccccccccCccccCHHHHcC-CCCCCccceechhH
Confidence 999999999999999999999987432111 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-------CHHHHHhccCCCCch
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-------SATELLQDALPPQME 667 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-------ta~eiL~~~~~~~~~ 667 (1170)
++|||++ ||......+....+.......|. ..++++.++|++||+.||.+|| ++.++++||||....
T Consensus 185 il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 185 LMYEMMAGQPPFEADNEDDLFESILHDDVLYPV---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 9999997 88766665555554443333332 3467899999999999999999 999999999998887
Q ss_pred HHHH
Q 001059 668 YELL 671 (1170)
Q Consensus 668 ~~~~ 671 (1170)
+..+
T Consensus 262 ~~~~ 265 (321)
T cd05591 262 WVLL 265 (321)
T ss_pred HHHH
Confidence 6644
No 99
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.5e-38 Score=360.86 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=206.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||+||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-------------- 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------------- 66 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--------------
Confidence 369999999999999999999999999975432 22334567889999999999999999987732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 517 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||+ +||+||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 457899999997 5898888888889999999999999999999998 799999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGV 184 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCCeecCCCC---------------cccccccCCcccCCHHHHcc-CCCCCccccccccc
Confidence 999999999999999999999987431110 01133579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~ 669 (1170)
++|||++ ||...........+......+|. ..++++.+||++||+.||.+|+ ++.++++|+||.+..+.
T Consensus 185 il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 185 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred eeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 77665554444433333333333 4567999999999999999996 99999999999987755
Q ss_pred H
Q 001059 670 L 670 (1170)
Q Consensus 670 ~ 670 (1170)
.
T Consensus 262 ~ 262 (325)
T cd05594 262 D 262 (325)
T ss_pred H
Confidence 3
No 100
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.1e-37 Score=374.95 Aligned_cols=253 Identities=21% Similarity=0.280 Sum_probs=198.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCC------CceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ------HVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hp------nIV~l~~~~~e~~ 427 (1170)
.++|+++++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++|. +|++++++|..
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-- 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-- 202 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc--
Confidence 368999999999999999999999999999999996422 2234566788888777654 47777766622
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++|+||++++++|.+++...+.+++..++.++.||+.||+
T Consensus 203 -------------------------------------~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~ 245 (467)
T PTZ00284 203 -------------------------------------ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALD 245 (467)
T ss_pred -------------------------------------CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 2356899999999999999988888999999999999999999
Q ss_pred HHHh-CCccccCCCCCceeecCCC----------------CEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 508 HIHG-QGIIHRDLTPNNIFFDARN----------------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 508 yLHs-~gIiHrDLKp~NILi~~~~----------------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
|||+ .|||||||||+|||++.++ .+||+|||+++.... ..+..+|
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~------------------~~~~~~g 307 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH------------------SRTAIVS 307 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc------------------ccccccC
Confidence 9998 5999999999999998765 499999998864211 1244689
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccc-----------------
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV----------------- 630 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~----------------- 630 (1170)
|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+....+....+.+|..|.
T Consensus 308 t~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 308 TRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 999999999988 569999999999999999997 77655443332222111121111110
Q ss_pred ----------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 631 ----------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 631 ----------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+.+.+||.+||+.||.+|||++|+|+||||.+..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence 0124567999999999999999999999999998653
No 101
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.3e-37 Score=356.63 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=205.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHH---HhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATL---SRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL---~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
|++++.||+|+||.||+|.++.+|+.||||+++.... .....+.+.+|+.++ +.++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~------- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT------- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-------
Confidence 6789999999999999999999999999999975431 122345566676655 56689999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||++ +|...+.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05589 74 ---------------------------------EDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHE 119 (324)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999975 78776654 579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|||||++.+ ..++.++|
T Consensus 120 ~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (324)
T cd05589 120 NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---------------DRTSTFCGTPEFLAPEVLTE-TSYTRAVD 183 (324)
T ss_pred CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC---------------CcccccccCccccCHhHhcC-CCCCcccc
Confidence 999999999999999999999999999987431110 11234679999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 663 (1170)
||||||++|||++ ||......+....+.......|. ..++++.++|++||+.||.+|| ++.++++|+||
T Consensus 184 iwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f 260 (324)
T cd05589 184 WWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR---FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260 (324)
T ss_pred hhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence 9999999999997 88766555554444443333333 3567899999999999999999 79999999999
Q ss_pred CCchHHH
Q 001059 664 PQMEYEL 670 (1170)
Q Consensus 664 ~~~~~~~ 670 (1170)
....+..
T Consensus 261 ~~~~~~~ 267 (324)
T cd05589 261 RDINWDD 267 (324)
T ss_pred CCCCHHH
Confidence 9876543
No 102
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.1e-37 Score=363.67 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=209.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------- 113 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-------- 113 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--------
Confidence 4789999999999999999999999999999999974322 2223456789999999999999999998873
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++|+|||||+ |+|.+++... .+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~ 160 (370)
T cd05621 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5899888654 68999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---CCCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~ 588 (1170)
+||+||||||+|||++.++.+||+|||+|....... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--------------ceecccCCCCcccCCHHHHhccCCCCCCCc
Confidence 999999999999999999999999999998643211 01123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 662 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 662 (1170)
++|||||||++|||++ ||...........+......+ .+.....++.++++|.+||..+|.+ |+++.++++|||
T Consensus 227 ~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 227 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 9999999999999997 887666555544444322221 1223345778999999999866644 899999999999
Q ss_pred CCCchHH
Q 001059 663 PPQMEYE 669 (1170)
Q Consensus 663 ~~~~~~~ 669 (1170)
+....+.
T Consensus 307 ~~~~~~~ 313 (370)
T cd05621 307 FKNDQWN 313 (370)
T ss_pred cCCCCcC
Confidence 9886543
No 103
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-38 Score=360.34 Aligned_cols=248 Identities=27% Similarity=0.392 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+++.+...||+|+||+||+|+|-. .||||+++....+.+..+.|.+||.+|++-+|.||+=+.|+|..+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-------- 460 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-------- 460 (678)
T ss_pred HHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--------
Confidence 556678899999999999999973 599999999888888889999999999999999999999998543
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.+.||+.+|.| +|+.+++.. ..|+....+.|+.||+.||.|||.+
T Consensus 461 ---------------------------------~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK 507 (678)
T KOG0193|consen 461 ---------------------------------PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK 507 (678)
T ss_pred ---------------------------------ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh
Confidence 34899999987 899998744 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ks 590 (1170)
+|||||||+.|||+.++++|||+|||++.........++ .....|...|||||++... ..|++.+
T Consensus 508 ~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q-------------~~qp~gsilwmAPEvIRmqd~nPfS~qS 574 (678)
T KOG0193|consen 508 NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ-------------LEQPHGSLLWMAPEVIRMQDDNPFSFQS 574 (678)
T ss_pred hhhhhhccccceEEccCCcEEEecccceeeeeeeccccc-------------cCCCccchhhhcHHHHhhcccCCCCccc
Confidence 999999999999999999999999999986543321111 1223578899999997642 4589999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|||++ ||......++....-++. ........+++.++++|+..||..++++||.+.+||.
T Consensus 575 DVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 575 DVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred chhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999999999998 888544444443332221 1112233445558999999999999999999999986
No 104
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=352.32 Aligned_cols=258 Identities=25% Similarity=0.397 Sum_probs=224.5
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+....=|.+.+.||+|.|..|.+|+|..||..||||+|.+...+.-....+.+|+..|+-++|||||++|++.
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi------- 86 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI------- 86 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-------
Confidence 3445668889999999999999999999999999999987766555566899999999999999999999764
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+|+|+|+-+ |+|++++.+. ..+.+..+.+|+.||+.|+.|
T Consensus 87 ---------------------------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~Y 133 (864)
T KOG4717|consen 87 ---------------------------------DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISY 133 (864)
T ss_pred ---------------------------------cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 13578999999986 5999998765 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
+|+.++|||||||+|+.+-+ -|-|||.|||++..+.+.. ..++.||+.+|-|||++.|..+-.
T Consensus 134 CHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~----------------kL~TsCGSLAYSAPEILLGDsYDA 197 (864)
T KOG4717|consen 134 CHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK----------------KLTTSCGSLAYSAPEILLGDSYDA 197 (864)
T ss_pred HhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc----------------hhhcccchhhccCchhhhcCccCC
Confidence 99999999999999998765 4899999999998764332 235679999999999999966566
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
+++||||||||||-|++ ||....+.+.+..++..+...|.. .+.++++||.+||..||.+|.+.++|..++|.+
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPsh---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSH---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchh---hhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 89999999999999986 999988888888888777777764 456999999999999999999999999999988
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
...
T Consensus 275 ~~D 277 (864)
T KOG4717|consen 275 AGD 277 (864)
T ss_pred CCC
Confidence 764
No 105
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=361.34 Aligned_cols=250 Identities=25% Similarity=0.407 Sum_probs=207.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|.-++.||.|+||-||-|++..+.+.||||++.... .+.+..+++++||..|++++|||+|.|.+||+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr---------- 97 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR---------- 97 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec----------
Confidence 555788999999999999999999999999998765 345566789999999999999999999999853
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|+|||||-|+-.+++.- ..++.+-++..|+.+.+.||+|||+.+.
T Consensus 98 ------------------------------e~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~ 147 (948)
T KOG0577|consen 98 ------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR 147 (948)
T ss_pred ------------------------------cchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 345699999999887777754 3568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccchh
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKADM 592 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ksDI 592 (1170)
||||||..|||+++.|.|||+|||.|....+ ..+++|||+|||||++.. .+.|+-++||
T Consensus 148 IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDv 208 (948)
T KOG0577|consen 148 IHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDV 208 (948)
T ss_pred HhhhccccceEecCCCeeeeccccchhhcCc-------------------hhcccCCccccchhHheeccccccCCccce
Confidence 9999999999999999999999999986532 367899999999998753 3679999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||+..||.- |....+-+..+..+. ++....-.....+..+++|+..||++-|.+|||.+++|.|+|....
T Consensus 209 WSLGITCIELAERkPPlFnMNAMSALYHIA-QNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 209 WSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred eeccchhhhhhhcCCCccCchHHHHHHHHH-hcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 999999999984 555444444444333 3332222223344588999999999999999999999999986544
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.7e-37 Score=356.03 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=205.0
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+.||+|+||.||+|++. .+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~---------- 71 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT---------- 71 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec----------
Confidence 67999999999999874 4689999999975321 22234567889999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|++|||++ ++|.+.+...+.+.+..++.++.||+.||+|||++||
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 72 ------------------------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ------------------------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 356899999997 5899999888889999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diws 185 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------TVTHTFCGTIEYMAPEILMR-SGHGKAVDWWS 185 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------CcccccCCCccccChhhccC-CCCCCcceecc
Confidence 999999999999999999999999987431110 01133579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQM 666 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~ 666 (1170)
|||++|||++ ||...........+......+|+ ..++++.+||++||+.||.+|| ++.++++|+|+...
T Consensus 186 lG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 186 LGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP---YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred cHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999997 77766555544444443333333 3567899999999999999999 89999999999887
Q ss_pred hHH
Q 001059 667 EYE 669 (1170)
Q Consensus 667 ~~~ 669 (1170)
.+.
T Consensus 263 ~~~ 265 (323)
T cd05584 263 NWD 265 (323)
T ss_pred CHH
Confidence 654
No 107
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2.9e-37 Score=354.77 Aligned_cols=252 Identities=27% Similarity=0.417 Sum_probs=203.2
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|++..+++.||||+++.... .......+..|..++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-------------- 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-------------- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE--------------
Confidence 369999999999999999999999999975321 112334556677777654 8999999998773
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~ 120 (316)
T cd05592 67 --------------------------TKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120 (316)
T ss_pred --------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2457899999996 5999999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGE---------------GKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCC---------------CccccccCCccccCHHHHcC-CCCCCcccchhHHH
Confidence 999999999999999999999997532111 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-HHHHhccCCCCchHHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 671 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-~eiL~~~~~~~~~~~~~ 671 (1170)
++|||++ ||......+....+......+| ...++++.+||.+||+.||.+||++ .++++|+|+....+..+
T Consensus 185 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05592 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHH
Confidence 9999996 8876665554444333222222 3456789999999999999999986 58889999998876544
No 108
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.2e-37 Score=354.92 Aligned_cols=264 Identities=24% Similarity=0.417 Sum_probs=211.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 72 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-------- 72 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--------
Confidence 479999999999999999999999999999999974321 22234568889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..++|+||||++ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 73 --------------------------------ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred --------------------------------CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999996 599999876 4579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||++..+..... ......+||+.|||||++.+ ...++
T Consensus 121 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05597 121 LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--------------VQSNVAVGTPDYISPEILQAMEDGKGRYG 186 (331)
T ss_pred CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--------------ccccceeccccccCHHHHhhccccccCCC
Confidence 9999999999999999999999999999875432110 01123469999999999863 24578
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....+.... ..+++.....+++++++|++||+.++.+ ||++.++++|
T Consensus 187 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 89999999999999997 887655544444443322 2344555557789999999998765544 8899999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
+||....+....
T Consensus 267 p~~~~~~~~~~~ 278 (331)
T cd05597 267 PFFEGIDWDNIR 278 (331)
T ss_pred CCCCCCCHHHHh
Confidence 999988766543
No 109
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.6e-37 Score=355.99 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=202.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~------------- 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-------------
Confidence 4699999999999999999999999999754322 23345678899999998 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++...+.+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 68 ---------------------------ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899888888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------CccccccCCccccCHHHHcC-CCCCCccceechHH
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCch--------hHHHHHHHHhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHh
Q 001059 598 VFFELWH---PFSTA--------MERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 659 (1170)
Q Consensus 598 iL~ELlt---Pf~~~--------~~~~~~~~~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~ 659 (1170)
++|+|++ ||... .........+. ....+| ...++++.++|++||+.||.+||+ +.++++
T Consensus 185 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 185 LMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77421 11111222222 222233 245678999999999999999987 799999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....+...
T Consensus 262 hp~~~~~~~~~~ 273 (329)
T cd05588 262 HPFFRNIDWDLL 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999988876644
No 110
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.4e-37 Score=357.06 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=196.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.+.||+|+||.||+|.+. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 57999999999999999999863 34578999998743 2233456789999999999 899999999987331
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...+|++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T cd05102 84 -------------------------------------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRA 126 (338)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhh
Confidence 235799999997 5998888642
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcee
Q 001059 488 ------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525 (1170)
Q Consensus 488 ------------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NIL 525 (1170)
..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil 206 (338)
T cd05102 127 MVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNIL 206 (338)
T ss_pred hhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEE
Confidence 23778888999999999999999999999999999999
Q ss_pred ecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-
Q 001059 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 604 (1170)
Q Consensus 526 i~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt- 604 (1170)
++.++.+||+|||+++.+..... ........+++.|+|||++.+ ..++.++|||||||++|||++
T Consensus 207 ~~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~ 272 (338)
T cd05102 207 LSENNVVKICDFGLARDIYKDPD-------------YVRKGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSL 272 (338)
T ss_pred EcCCCcEEEeecccccccccCcc-------------hhcccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999986421110 011123356789999999987 568999999999999999984
Q ss_pred ---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 605 ---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 605 ---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||......+.....+. .+..+......++++.++|.+||+.||.+|||+.++++.
T Consensus 273 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~ 330 (338)
T cd05102 273 GASPYPGVQINEEFCQRLK-DGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEI 330 (338)
T ss_pred CCCCCCCCCccHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 7765433333323222 222333334567789999999999999999999999863
No 111
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.2e-37 Score=354.40 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=203.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+..|..++..+ +||||++++++|.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~------------- 67 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-------------
Confidence 469999999999999999999999999975321 112344567788888754 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
..++|+|||||+ ++|...+.....+++..+..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 68 ---------------------------KEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred ---------------------------CCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899998888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGD---------------NRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCeecccCC---------------CceeccCCCcCccCHHHHcC-CCCCcccchhhhHH
Confidence 999999999999999999999986421100 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-HHHHhccCCCCchHHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 671 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-~eiL~~~~~~~~~~~~~ 671 (1170)
++|||++ ||......+....+......+| ...++++++||++||+.||.+||++ +++++|+||....+...
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~~ 259 (316)
T cd05620 185 LLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHHH
Confidence 9999996 8876655444433332222222 2356799999999999999999998 58889999999876544
No 112
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-40 Score=345.65 Aligned_cols=250 Identities=26% Similarity=0.471 Sum_probs=210.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+-|.++.+||+|+||.||+|.|+.+|+.+|||.++.. .+.+++.+|+.++.+++.|++|+|||.|+.
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK--------- 99 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK--------- 99 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhcc---------
Confidence 4578899999999999999999999999999998743 346789999999999999999999998754
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|||||||+ |+..++++. +.++++.++..++...+.||+|||..
T Consensus 100 -------------------------------~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~ 148 (502)
T KOG0574|consen 100 -------------------------------HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL 148 (502)
T ss_pred -------------------------------CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence 356899999997 799998874 56799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
.-||||||..|||++.+|++||+|||.|-.+...- ....+.+|||.|||||+++. -.|+.++||
T Consensus 149 ~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVI~E-IGY~~~ADI 212 (502)
T KOG0574|consen 149 KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIEE-IGYDTKADI 212 (502)
T ss_pred HHHHhhcccccEEEcccchhhhhhccccchhhhhH---------------HhhCccccCcccccHHHHHH-hccchhhhH
Confidence 99999999999999999999999999998764321 22456799999999999987 458999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc---ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++..||.- ||..-.++.....+-. ..||.+ ...+.++.+|+++||.+.|++|-|+.++++|+|.++-
T Consensus 213 WSLGITaIEMAEG~PPYsDIHPMRAIFMIPT---~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 213 WSLGITAIEMAEGRPPYSDIHPMRAIFMIPT---KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred hhhcchhhhhhcCCCCcccccccceeEeccC---CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 999999999985 7766655544333222 222222 2234578999999999999999999999999998876
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 290 ~ 290 (502)
T KOG0574|consen 290 P 290 (502)
T ss_pred C
Confidence 5
No 113
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.3e-37 Score=357.64 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=207.1
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||++++. .+|+.||+|+++...........+.+|+.+|++++||||++++++|..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 69 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT------------ 69 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc------------
Confidence 57999999999999873 578999999997543333334567889999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+|
T Consensus 70 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 70 ----------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred ----------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 357899999996 699999988888999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||||
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG 185 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFG 185 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCC---------------CceecccCChhhcCHHHHcC-CCCCCccceeccc
Confidence 9999999999999999999999987542110 01234579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 668 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 668 (1170)
|++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||+ +.++++|+||....+
T Consensus 186 ~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 186 VLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ---FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred eEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 99999997 78766555555444443333443 35678999999999999999999 788999999998865
Q ss_pred HH
Q 001059 669 EL 670 (1170)
Q Consensus 669 ~~ 670 (1170)
..
T Consensus 263 ~~ 264 (318)
T cd05582 263 NK 264 (318)
T ss_pred HH
Confidence 53
No 114
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.8e-37 Score=344.16 Aligned_cols=253 Identities=29% Similarity=0.478 Sum_probs=203.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ---------- 70 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee----------
Confidence 5899999999999999999999999999999987654443345678899999999999999999998743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 120 (285)
T cd07861 71 ------------------------------ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120 (285)
T ss_pred ------------------------------CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999998887643 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 185 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI 185 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---------------ccccCCcccccccChHHhcCCCCcCcHHHH
Confidence 99999999999999999999999999997542111 011334678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|+|++ ||................+ .........++++.++|++|
T Consensus 186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (285)
T cd07861 186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM 265 (285)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence 999999999997 6654433222211111000 00111234567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+|||+.+++.|+||
T Consensus 266 l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 266 LIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hcCChhhCCCHHHHhcCCCC
Confidence 99999999999999999996
No 115
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=358.18 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=197.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
....++-||.|+-|.||+|+.+ ++.||||+++- .-..+++-|++|+||||+.+.|+|.
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCt----------- 182 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCT----------- 182 (904)
T ss_pred HhhhhhhhccCcccceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeec-----------
Confidence 3344667999999999999987 89999997641 1123688899999999999999983
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
..+.++||||||. |-|..+|.....++......+..+|+.||.|||.+.|
T Consensus 183 -----------------------------qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKI 233 (904)
T KOG4721|consen 183 -----------------------------QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKI 233 (904)
T ss_pred -----------------------------CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhH
Confidence 3578999999997 7999999999999999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
||||||+-||||+.+..|||+|||-++...... +..+++||..|||||++.. ...+.|+||||
T Consensus 234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S----------------TkMSFaGTVaWMAPEvIrn-ePcsEKVDIwS 296 (904)
T KOG4721|consen 234 IHRDLKSPNILISYDDVVKISDFGTSKELSDKS----------------TKMSFAGTVAWMAPEVIRN-EPCSEKVDIWS 296 (904)
T ss_pred hhhccCCCceEeeccceEEeccccchHhhhhhh----------------hhhhhhhhHhhhCHHHhhc-CCcccccceeh
Confidence 999999999999999999999999998764321 2356899999999999998 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|||+|||||| ||..-....+....-. +....+.+..++..++-||++||+..|..||++.+||+|-
T Consensus 297 fGVVLWEmLT~EiPYkdVdssAIIwGVGs-NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 297 FGVVLWEMLTGEIPYKDVDSSAIIWGVGS-NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred hHHHHHHHHhcCCCccccchheeEEeccC-CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 9999999998 8776554433221111 1112233455667899999999999999999999999983
No 116
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=4.1e-37 Score=353.70 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=206.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~------------- 67 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT------------- 67 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 469999999999999999999999999975421 222345677899999888 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..+..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~ 120 (318)
T cd05570 68 ---------------------------KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120 (318)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEcc
Confidence 457899999996 5899988888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGv 184 (318)
T cd05570 121 DLKLDNVLLDSEGHIKIADFGMCKEGILGG---------------VTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGV 184 (318)
T ss_pred CCCHHHeEECCCCcEEecccCCCeecCcCC---------------CcccceecCccccCHHHhcC-CCCCcchhhhhHHH
Confidence 999999999999999999999986421110 01133579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~~~~~~~ 669 (1170)
++|+|++ ||...........+.......| ...++++.+||++||..||.+||++ .++++|+|+....+.
T Consensus 185 il~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 185 LLYEMLAGQSPFEGDDEDELFQSILEDEVRYP---RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 8876555554444433333333 2456789999999999999999999 999999999988765
Q ss_pred H
Q 001059 670 L 670 (1170)
Q Consensus 670 ~ 670 (1170)
.
T Consensus 262 ~ 262 (318)
T cd05570 262 K 262 (318)
T ss_pred H
Confidence 3
No 117
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.2e-37 Score=354.70 Aligned_cols=252 Identities=23% Similarity=0.372 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~------------- 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------------
Confidence 469999999999999999999999999975432 223445678899988877 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 68 ---------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 457899999997 5898888888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCC---------------CccccccCCccccCHHHHcC-CCCCCccceecccH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCch--------hHHHHHHH-HhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHh
Q 001059 598 VFFELWH---PFSTA--------MERQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 659 (1170)
Q Consensus 598 iL~ELlt---Pf~~~--------~~~~~~~~-~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~ 659 (1170)
++|||++ ||... ........ .......+| ...++.+.++|++||+.||.+||+ +.++++
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77411 11111222 222222233 345678999999999999999998 589999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....+...
T Consensus 262 hp~f~~~~~~~~ 273 (329)
T cd05618 262 HPFFRNVDWDLM 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999999877654
No 118
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.6e-37 Score=346.95 Aligned_cols=253 Identities=30% Similarity=0.497 Sum_probs=201.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||+|+++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH----------- 69 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-----------
Confidence 488999999999999999999999999999999765444334456788999999999999999987762
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
+...+|+++|||+++|.+.+.. ...+++..++.++.||+.||.|||++||
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 120 (284)
T cd07839 70 -----------------------------SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120 (284)
T ss_pred -----------------------------cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 2456899999999999888765 4569999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 185 (284)
T cd07839 121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185 (284)
T ss_pred ecCCCCHHHEEEcCCCcEEECccchhhccCCCC---------------CCcCCCccccCCcChHHHhCCcccCcHHHHHH
Confidence 999999999999999999999999997543211 01123467899999999887555799999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHh-hhc-----------------CCCC---------CccccCCHHHHHHHHHcc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDL-KQK-----------------GELP---------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l-~~~-----------------~~~p---------~~~~~~~~e~~~LI~~~L 644 (1170)
|||++|+|++ ||......+.....+ ... ...+ ......++++.+||++||
T Consensus 186 lG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07839 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLL 265 (284)
T ss_pred HHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHh
Confidence 9999999996 544322221111111 000 0000 111235678899999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.||.+|||++++++|+||
T Consensus 266 ~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 266 VCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCChhhcCCHHHHhcCCCC
Confidence 9999999999999999997
No 119
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.1e-37 Score=352.58 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=210.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+|+..+.||+|+||+||+|+++.+|+.||+|+++.... .......+..|..+++.+. ||+|+++++++.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ--------- 71 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe---------
Confidence 47889999999999999999999999999999975321 2223456778999998886 567778887763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~ 120 (323)
T cd05615 72 -------------------------------TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR 120 (323)
T ss_pred -------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05615 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---------------VTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CeeccCCCHHHeEECCCCCEEEeccccccccCCCC---------------ccccCccCCccccCHHHHcC-CCCCCccch
Confidence 99999999999999999999999999987432110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 664 (1170)
|||||++|||++ ||...........+.......|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~ 261 (323)
T cd05615 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFR 261 (323)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccC
Confidence 999999999997 88776665555555443433443 35678999999999999999997 58999999999
Q ss_pred CchHHHHH
Q 001059 665 QMEYELLD 672 (1170)
Q Consensus 665 ~~~~~~~~ 672 (1170)
...+....
T Consensus 262 ~~~~~~~~ 269 (323)
T cd05615 262 RIDWDKLE 269 (323)
T ss_pred CCCHHHHh
Confidence 98766443
No 120
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.1e-36 Score=346.65 Aligned_cols=258 Identities=25% Similarity=0.406 Sum_probs=206.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||.|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-------- 75 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 75 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--------
Confidence 57899999999999999999999999999999998754322 223467789999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++++|.+.+... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (301)
T cd07873 76 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123 (301)
T ss_pred --------------------------------CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999999888754 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 124 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 188 (301)
T cd07873 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDM 188 (301)
T ss_pred CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---------------CcccccceeecccCcHHHhCCCCCccHHHH
Confidence 99999999999999999999999999997542111 011234678999999998775568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCCC--------ccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP--------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~--------~~~~~~~e~~~LI~~ 642 (1170)
|||||++|||++ ||......+.........+ ..|. .....++.+++||.+
T Consensus 189 ~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (301)
T cd07873 189 WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSK 268 (301)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHH
Confidence 999999999997 6654443322211111000 0110 112356788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||++++++|+||....
T Consensus 269 ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 269 LLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred HhcCCcccCcCHHHHhcCccccccc
Confidence 9999999999999999999998765
No 121
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.5e-37 Score=355.04 Aligned_cols=250 Identities=26% Similarity=0.401 Sum_probs=202.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~------------- 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-------------
Confidence 469999999999999999999999999975422 1122344555554 5678999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~ 120 (323)
T cd05575 68 ---------------------------ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120 (323)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 457899999996 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (323)
T cd05575 121 DLKPENILLDSQGHVVLTDFGLCKEGIEHS---------------KTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGA 184 (323)
T ss_pred CCCHHHeEECCCCcEEEeccCCCcccccCC---------------CccccccCChhhcChhhhcC-CCCCccccccccch
Confidence 999999999999999999999987431110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~ 669 (1170)
++|||++ ||......+....+......+++ ..++.+.++|++||+.||.+||++ .++++|+||....+.
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~ 260 (323)
T cd05575 185 VLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP---NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWD 260 (323)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 9999997 88765555544444433333333 456789999999999999999987 699999999887654
No 122
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7e-37 Score=353.93 Aligned_cols=264 Identities=23% Similarity=0.386 Sum_probs=213.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.++||+|+||+||+++++.+++.||+|++..... .......+.+|+.++..++||||+++++++.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--------- 71 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 479999999999999999999999999999999864321 1223345788999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
+...+|+|||||+ |+|.+++.+ ...+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 72 -------------------------------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred -------------------------------cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 699999976 4579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||++..+.... .......+||+.|+|||++.+ ...++
T Consensus 121 ~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (332)
T cd05623 121 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEDGKGKYG 186 (332)
T ss_pred CCeEecCCCHHHEEECCCCCEEEeecchheecccCC--------------cceecccccCccccCHHHHhccccCCCCCC
Confidence 999999999999999999999999999987542111 011223579999999999863 24588
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....+.... ..+|......++++++||++||+.+|.+ |+++.++++|
T Consensus 187 ~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 99999999999999997 887666555554444332 2345555567889999999999765554 7899999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
+||.+..+..+.
T Consensus 267 ~~f~~~~~~~~~ 278 (332)
T cd05623 267 PFFTGIDWDNIR 278 (332)
T ss_pred CCcCCCCHHHHh
Confidence 999998776543
No 123
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.2e-37 Score=370.83 Aligned_cols=267 Identities=27% Similarity=0.421 Sum_probs=215.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||+||+|++..+|+.||||++.....+......+.+|+.+|..++|+||++++..+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~----- 105 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP----- 105 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc-----
Confidence 468999999999999999999999999999999998766665666778899999999999999999877633210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
........+++||||++ |+|.+++... ..+++..++.++.||+.||+|
T Consensus 106 ---------------------------~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 106 ---------------------------RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred ---------------------------cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 00112345789999997 6999888642 468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~-------------~~~~~~~~Gt~~Y~aPE~~~~-~~~s~ 224 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS-------------DDVGRTFCGTPYYVAPEIWRR-KPYSK 224 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc-------------ccccccccCCcceeCHHHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 001234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||......+.....+. +..++.....++++.++|.+||+.||.+||++.++++|||+..
T Consensus 225 k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 225 KADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA--GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876655544444332 2333334456789999999999999999999999999998766
Q ss_pred chH
Q 001059 666 MEY 668 (1170)
Q Consensus 666 ~~~ 668 (1170)
...
T Consensus 303 ~~~ 305 (496)
T PTZ00283 303 FIS 305 (496)
T ss_pred hhh
Confidence 543
No 124
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.2e-37 Score=352.69 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=203.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|++..+++.||||+++.... .......+..|..+++.+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~------------- 67 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-------------
Confidence 469999999999999999999999999975421 112334567788888764 99999999988733
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+||||++ ++|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHr 120 (316)
T cd05619 68 ---------------------------KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120 (316)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeC
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGD---------------AKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGV 184 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCC---------------CceeeecCCccccCHHHHcC-CCCCchhhhhhHHH
Confidence 999999999999999999999987421110 01134579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH-HHHhccCCCCchHHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQMEYELL 671 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~-eiL~~~~~~~~~~~~~ 671 (1170)
++|||++ ||......+...........+| ...+.+++++|.+||+.||.+||++. ++++||||....+..+
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05619 185 LLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP---RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHH
Confidence 9999997 8866555444333322222222 23567899999999999999999996 8999999999876543
No 125
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.3e-37 Score=350.68 Aligned_cols=250 Identities=26% Similarity=0.427 Sum_probs=189.6
Q ss_pred EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
.++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~----------- 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----------- 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecC-----------
Confidence 368999999999999976 3678999999864332 34578899999999999999999887432
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHH
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 71 ---------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 71 ---------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred ---------------------------CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887532 248999999999999999999
Q ss_pred HHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+|||+ +.++.+||+|||+|+....... ........+||+.|+|||++.+..
T Consensus 124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~~~ 191 (317)
T cd07868 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK------------PLADLDPVVVTFWYRAPELLLGAR 191 (317)
T ss_pred HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCc------------cccccCCccccccccCCHHHcCCC
Confidence 999999999999999999 4557899999999986532110 001123457899999999998756
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHH---------HHHHHHhhhcCC-----------CC---------------
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKGE-----------LP--------------- 626 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~l~~~~~-----------~p--------------- 626 (1170)
.++.++||||+||++|||++ ||...... .....+....+. .+
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
T cd07868 192 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT 271 (317)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccC
Confidence 68999999999999999997 66422110 000000000000 00
Q ss_pred ---------CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 627 ---------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 627 ---------~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.......+++.+||++||+.||.+|||++++|+||||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 272 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123467899999999999999999999999997
No 126
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.9e-37 Score=359.55 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=210.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~------- 114 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD------- 114 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-------
Confidence 4799999999999999999999999999999999875322 22234567889999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..++|+|||||+ ++|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 115 ---------------------------------~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 115 ---------------------------------DRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 588888765 458999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---CCCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~ 588 (1170)
+||+||||||+|||++.++++||+|||+++.+.... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 226 (371)
T cd05622 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (371)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--------------cccccCcccCccccCHHHHhccCCCccCCC
Confidence 999999999999999999999999999998653211 01123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 662 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 662 (1170)
++|||||||++|||++ ||...........+....... .+.....++.++++|.+||..++.+ |++++++++|+|
T Consensus 227 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 9999999999999996 887665555544444332222 2233457789999999999854443 789999999999
Q ss_pred CCCchHHH
Q 001059 663 PPQMEYEL 670 (1170)
Q Consensus 663 ~~~~~~~~ 670 (1170)
+.+..+.+
T Consensus 307 ~~~~~~~~ 314 (371)
T cd05622 307 FKNDQWAW 314 (371)
T ss_pred cCCCChhH
Confidence 98876544
No 127
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=336.35 Aligned_cols=297 Identities=24% Similarity=0.377 Sum_probs=236.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.-+++|+.+++||+|.||+|-+|+.+.+|+.||||++++.- ........-+.|-.+|...+||.+..+...|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF------- 237 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF------- 237 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-------
Confidence 35799999999999999999999999999999999997543 2233345567799999999999998876444
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+....+|+||||+. |.|.-+|.+...|++..++.|-.+|+.||.||
T Consensus 238 ---------------------------------Qt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YL 284 (516)
T KOG0690|consen 238 ---------------------------------QTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYL 284 (516)
T ss_pred ---------------------------------ccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhh
Confidence 34678999999996 58999999888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+++||+||||.+|.|+|.||++||+|||+++.-. . .-...+++||||.|+|||++.. ..|+.+
T Consensus 285 Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I----~-----------~g~t~kTFCGTPEYLAPEVleD-nDYgra 348 (516)
T KOG0690|consen 285 HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI----K-----------YGDTTKTFCGTPEYLAPEVLED-NDYGRA 348 (516)
T ss_pred hhCCeeeeechhhhheeccCCceEeeecccchhcc----c-----------ccceeccccCChhhcCchhhcc-ccccce
Confidence 99999999999999999999999999999998421 1 1123567899999999999998 689999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~ 661 (1170)
+|+|.+||++|||++ ||.........--++.....+|. ..+++++.|+..+|.+||.+|. .+.+|.+|+
T Consensus 349 VDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 349 VDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred eehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 999999999999997 99877665555555555555554 4567999999999999999997 589999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCccchhhhhcccccchhhhhhhcccccccCCC
Q 001059 662 LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRD 714 (1170)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~ 714 (1170)
||....|+.. +...+.+|-....-+..-.+.||++ .++..+.+.+.
T Consensus 426 FF~~v~W~~~--~~Kki~PPfKPqVtSetDTryFD~E-----FT~q~v~lTPP 471 (516)
T KOG0690|consen 426 FFASVDWEAT--YRKKIEPPFKPQVTSETDTRYFDEE-----FTSQPVTLTPP 471 (516)
T ss_pred hhccCCHHHH--HHhccCCCCCCCcccccchhhhhhh-----hhcceeEecCC
Confidence 9999987643 4444444433333333333334443 33444555443
No 128
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=333.82 Aligned_cols=338 Identities=19% Similarity=0.248 Sum_probs=287.1
Q ss_pred chhhccCCCC---CCCCccccccccccccccCCCcCccchhhHHHHHHHHHHhccccCCcc--chhHHHHHHHhhcCCcc
Q 001059 226 SLLQDHGSNN---DGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLT--DALPQIATELYNLGIFS 300 (1170)
Q Consensus 226 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~g~~~--~~~~~~~~~l~~l~~~~ 300 (1170)
++++...+.| .-|.+|+-- +- --|+| +|++||+..++++.+||++|.+| +|.+.+.+.+.+++...
T Consensus 85 kll~~kadvnavnehgntplhy-ac----fwgyd----qiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~ 155 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHY-AC----FWGYD----QIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKH 155 (448)
T ss_pred HHHHHhcccchhhccCCCchhh-hh----hhcHH----HHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHh
Confidence 4555555544 566677211 11 12444 56999999999999999999999 88999999999999999
Q ss_pred ccc-cCcCCCCcchhhhhhhHHHhhhhcccccccccCCCCCCCCCCCCCCCccccCCceEEeeeccCCcEEEEEEEEccC
Q 001059 301 ERG-RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLD 379 (1170)
Q Consensus 301 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~t 379 (1170)
++. ++++++++.|.+ .++++++.+++..++....++.++.+|.....|+.|+|+|+
T Consensus 156 gq~~nripfkdt~wkg---------------------tktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq-- 212 (448)
T KOG0195|consen 156 GQSPNRIPFKDTTWKG---------------------TKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ-- 212 (448)
T ss_pred CCCCCccccccccccc---------------------ccccccccccccccCcchhhhhhhhhhccCCCccccccccc--
Confidence 888 789999988876 56778888999999999999999999999999999999998
Q ss_pred CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCccccccccccccccccccc
Q 001059 380 GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459 (1170)
Q Consensus 380 g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 459 (1170)
|..+++|+++...++.+..++|..|+..|+.+.||||+.++++|.
T Consensus 213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn----------------------------------- 257 (448)
T KOG0195|consen 213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN----------------------------------- 257 (448)
T ss_pred CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-----------------------------------
Confidence 888999999999999888999999999999999999999999983
Q ss_pred ccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCceeecCCCCEEE
Q 001059 460 QENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARNDIKI 534 (1170)
Q Consensus 460 ~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLHs~g--IiHrDLKp~NILi~~~~~vKL 534 (1170)
..+++.++.+|++ |+|+.+++.... ++..++.+++.+|++||+|||+.. |....|++..++||++.+++|
T Consensus 258 -----sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 258 -----SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred -----CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe
Confidence 3478899999998 799999997765 788999999999999999999975 667789999999999998887
Q ss_pred e--ecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC--CCccchhHHHHHHHHHhhc---CCC
Q 001059 535 G--DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFS 607 (1170)
Q Consensus 535 ~--DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~ksDIwSlGviL~ELlt---Pf~ 607 (1170)
+ |- +++++..+....|.||+||.++..+. .-.++|||||+|++|||.| ||.
T Consensus 333 smad~----------------------kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfa 390 (448)
T KOG0195|consen 333 SMADT----------------------KFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFA 390 (448)
T ss_pred ecccc----------------------eeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccc
Confidence 5 32 23344456788999999999998554 4578999999999999998 999
Q ss_pred chhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 608 TAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 608 ~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
...+++..+++.. .+..+..++..++.+.+||.-|++.||.+||.+++|+
T Consensus 391 dlspmecgmkial-eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 391 DLSPMECGMKIAL-EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred cCCchhhhhhhhh-ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 9999999988876 4555555567788999999999999999999998875
No 129
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-36 Score=352.33 Aligned_cols=255 Identities=25% Similarity=0.388 Sum_probs=205.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.++||.|+||.||+|.++.+|..+|+|++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--------
Confidence 368999999999999999999999999999999987542 33445678999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ ++|.+++.....+++..+..++.||+.||.|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 122 (333)
T cd06650 75 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 122 (333)
T ss_pred --------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 356899999996 59999998888899999999999999999999985
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|+||||||+|||++.++.+||+|||++..+... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 184 (333)
T cd06650 123 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (333)
T ss_pred CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----------------ccccCCCCccccCHHHhcC-CCCCcHHH
Confidence 7999999999999999999999999999754211 0123478999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHH------------------------------------------hhhcCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSD------------------------------------------LKQKGELP 626 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~------------------------------------------l~~~~~~p 626 (1170)
||||||++|+|++ ||............ .......+
T Consensus 185 vwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (333)
T cd06650 185 IWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPP 264 (333)
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCc
Confidence 9999999999996 66543322211000 00000001
Q ss_pred Cc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 627 PS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 627 ~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.. ....++++++||.+||+.||++|||+.++++|+|+....
T Consensus 265 ~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 265 KLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 10 112356889999999999999999999999999987664
No 130
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.3e-37 Score=344.04 Aligned_cols=249 Identities=28% Similarity=0.416 Sum_probs=198.1
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+|.++.+|+.||+|++...... ....+.+..|+.+++.++||||++++++|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----------------- 63 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ----------------- 63 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----------------
Confidence 79999999999999999999999998754322 122356788999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
....+|++||||+ ++|.+.+.. ...+++..++.++.||+.||+|||++||+|
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 64 -----------------------TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred -----------------------CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2356899999997 588777642 346899999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+||+++.++.+||+|||++..+.... .......||+.|+|||++.+ ..++.++||||||
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG 184 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQ---------------SKTKGYAGTPGFMAPELLQG-EEYDFSVDYFALG 184 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCccceecCCCC---------------ccccccCCCcCccCHHHhcC-CCCCccccHHHHH
Confidence 9999999999999999999999997543211 01133579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCCchhHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCC
Q 001059 597 IVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 664 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~ 664 (1170)
|++|||++ ||...... ......... ........++++.+++.+||+.||.+|| +++++++||||.
T Consensus 185 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 185 VTLYEMIAARGPFRARGEKVENKELKQRILND---SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHHHHHhCCCCCCCCCcchhHHHHHHhhccc---CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 99999997 77643221 111111111 1112234667899999999999999999 889999999999
Q ss_pred CchHHH
Q 001059 665 QMEYEL 670 (1170)
Q Consensus 665 ~~~~~~ 670 (1170)
...+..
T Consensus 262 ~~~~~~ 267 (280)
T cd05608 262 DLNWRQ 267 (280)
T ss_pred cCCHhH
Confidence 876553
No 131
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1e-36 Score=352.46 Aligned_cols=264 Identities=24% Similarity=0.402 Sum_probs=213.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+++++.+++.||+|++.... ........+.+|..+++.++||||+++++++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--------- 71 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--------- 71 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 57999999999999999999999999999999987432 12223445788999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~ 120 (331)
T cd05624 72 -------------------------------DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120 (331)
T ss_pred -------------------------------cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 599999976 4679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||++.+. ..++
T Consensus 121 ~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--------------TVQSSVAVGTPDYISPEILQAMEDGMGKYG 186 (331)
T ss_pred CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--------------ceeeccccCCcccCCHHHHhccccCCCCCC
Confidence 999999999999999999999999999997643211 0111235799999999998752 3478
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....+.... ..+|......+++++++|.+||+.++.+ |++++++++|
T Consensus 187 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 89999999999999997 887665555444443322 2345555567789999999999976654 5799999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
+||....+....
T Consensus 267 ~~f~~~~~~~~~ 278 (331)
T cd05624 267 AFFEGIDWENIR 278 (331)
T ss_pred CCcCCCCHHHHh
Confidence 999998876654
No 132
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.1e-36 Score=355.17 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=199.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|+.+++||+|+||+||+|++..+|+.||||++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 143 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH------- 143 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-------
Confidence 4578999999999999999999999999999999986432 33445678999999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++||||.+ +|... ...++..+..++.||+.||+|||+
T Consensus 144 ---------------------------------~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~ 186 (353)
T PLN00034 144 ---------------------------------NGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHR 186 (353)
T ss_pred ---------------------------------CCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 66432 346778888999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||+++.+.... ......+||+.|+|||++... ...+
T Consensus 187 ~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 251 (353)
T PLN00034 187 RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------DPCNSSVGTIAYMSPERINTDLNHGAYDG 251 (353)
T ss_pred CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc---------------ccccccccCccccCccccccccccCcCCC
Confidence 999999999999999999999999999998653111 011345799999999987531 2345
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
.++|||||||++|||++ ||...... ........ ....+......++++.+||.+||+.||.+|||+.++++|+|
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 68999999999999996 77532211 11111111 12223333456779999999999999999999999999999
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
+...
T Consensus 331 ~~~~ 334 (353)
T PLN00034 331 ILRA 334 (353)
T ss_pred cccC
Confidence 8875
No 133
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.6e-36 Score=343.00 Aligned_cols=257 Identities=27% Similarity=0.399 Sum_probs=205.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|++.+.||+|+||+||++.+..+++.||||++....... .....+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE---------- 70 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec----------
Confidence 4889999999999999999999999999999997543221 22345788999999999999999998762
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....+|++||||+ ++|.+++... ..+++..+..++.||+.||.|||+
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05605 71 ------------------------------TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR 120 (285)
T ss_pred ------------------------------CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2357899999996 5888877543 359999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||++++++.++|+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05605 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------TIRGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----------------ccccccCCCCccCcHHhcC-CCCCcccc
Confidence 999999999999999999999999999987542111 1123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHH---HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~---~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~ 660 (1170)
|||+||++|||++ ||........ ....+. ...+......++.+.+||.+||..||.+|| +++++++|
T Consensus 184 iws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK--EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred chhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhh--hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 7765433221 111111 111222234567899999999999999999 99999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
+|+....+.-.
T Consensus 262 ~~~~~~~~~~~ 272 (285)
T cd05605 262 PFFRTANFKRL 272 (285)
T ss_pred cCccCCCHHHH
Confidence 99998766544
No 134
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7e-37 Score=357.65 Aligned_cols=247 Identities=26% Similarity=0.337 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++++.||+|+||.||+|++..+++.||+|+.... ...+|+.+++.++||||++++++|.+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 128 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVS--------- 128 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEe---------
Confidence 4799999999999999999999999999999975321 23569999999999999999988743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|+||||+.++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 129 -------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 129 -------------------------------GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred -------------------------------CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346799999999999988865 456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||
T Consensus 178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw 240 (357)
T PHA03209 178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----------------PAFLGLAGTVETNAPEVLAR-DKYNSKADIW 240 (357)
T ss_pred eecCCCCHHHEEECCCCCEEEecCccccccccC----------------cccccccccccccCCeecCC-CCCCchhhHH
Confidence 999999999999999999999999999743211 01234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc----CCCchh---------HHHHHHHHhhhcCCCCCc-------------------------------c
Q 001059 594 SLGIVFFELWH----PFSTAM---------ERQIVLSDLKQKGELPPS-------------------------------W 629 (1170)
Q Consensus 594 SlGviL~ELlt----Pf~~~~---------~~~~~~~~l~~~~~~p~~-------------------------------~ 629 (1170)
||||++|||++ +|.... ........+...+..|.. .
T Consensus 241 SlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T PHA03209 241 SAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQR 320 (357)
T ss_pred HHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhc
Confidence 99999999985 222110 011111111111111110 0
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 630 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
...+.++.+||.+||+.||.+|||+.++|+||||.++
T Consensus 321 ~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 321 VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 1234466789999999999999999999999999864
No 135
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.2e-37 Score=355.28 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=202.7
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
||+|+||+||+|+++.+|+.||||++..... .......+.+|..++..+ .||||++++++|.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~------------- 67 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT------------- 67 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-------------
Confidence 7999999999999999999999999965322 112233456677777665 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHr 120 (330)
T cd05586 68 ---------------------------DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120 (330)
T ss_pred ---------------------------CCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999996 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv 185 (330)
T cd05586 121 DLKPENILLDATGHIALCDFGLSKANLTDN---------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185 (330)
T ss_pred cCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------CCccCccCCccccCHHHHcCCCCCCCccceecccc
Confidence 999999999999999999999987532110 01234579999999999976556899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC----CHHHHHhccCCCCchHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----ta~eiL~~~~~~~~~~~~ 670 (1170)
++|+|++ ||......+....+......+|.. ..++++.+||++||+.||.+|| ++.++++|+|+....+..
T Consensus 186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~ 263 (330)
T cd05586 186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN--VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDL 263 (330)
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc--cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHH
Confidence 9999997 777655554444443333333332 3567899999999999999998 799999999999877654
Q ss_pred H
Q 001059 671 L 671 (1170)
Q Consensus 671 ~ 671 (1170)
.
T Consensus 264 ~ 264 (330)
T cd05586 264 L 264 (330)
T ss_pred H
Confidence 4
No 136
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=379.24 Aligned_cols=261 Identities=31% Similarity=0.546 Sum_probs=212.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
....+++|++++.||.|+||+||+|.++.++..||+|++............+.+|+.+|+.++|||||+++++|...
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de--- 84 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK--- 84 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---
Confidence 34557899999999999999999999999999999999987655555667899999999999999999999988542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~ 504 (1170)
....+|||||||+ ++|.+++... ..+++..++.|+.||+.
T Consensus 85 -----------------------------------~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ 129 (1021)
T PTZ00266 85 -----------------------------------ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129 (1021)
T ss_pred -----------------------------------CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 2356899999997 5999888652 56999999999999999
Q ss_pred HHHHHHhC-------CccccCCCCCceeecC-----------------CCCEEEeecCcchhccccccccCCCCCCCCCC
Q 001059 505 GLAHIHGQ-------GIIHRDLTPNNIFFDA-----------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560 (1170)
Q Consensus 505 gL~yLHs~-------gIiHrDLKp~NILi~~-----------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~ 560 (1170)
||+|||+. +||||||||+||||+. .+.+||+|||++..+....
T Consensus 130 ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------- 196 (1021)
T PTZ00266 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------- 196 (1021)
T ss_pred HHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-------------
Confidence 99999984 4999999999999964 2359999999997642111
Q ss_pred ccccCcccccCccCCCcccccCC-CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHH
Q 001059 561 VSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 636 (1170)
Q Consensus 561 ~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~ 636 (1170)
.....+||+.|+|||++.+. ..++.++||||||||||||++ ||............+.....+| ....++++
T Consensus 197 ---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL 271 (1021)
T PTZ00266 197 ---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKEL 271 (1021)
T ss_pred ---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHH
Confidence 11335799999999998642 358899999999999999997 8865554444444444333222 23456799
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||.+||+.+|.+||++.++|+|+|+...
T Consensus 272 ~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 272 NILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 999999999999999999999999887654
No 137
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.2e-37 Score=352.22 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=202.9
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~------------- 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-------------
Confidence 369999999999999999999999999975422 2223345556655 4677899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~ 120 (325)
T cd05604 68 ---------------------------TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120 (325)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 457899999997 5898888888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (325)
T cd05604 121 DLKPENILLDSQGHVVLTDFGLCKEGIAQS---------------DTTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEeecCCcccCCCCC---------------CCcccccCChhhCCHHHHcC-CCCCCcCccccccc
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 670 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~~ 670 (1170)
++|||++ ||......+............++ ..+..+.++|++||..||.+||++ .+++.|+||....+..
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~ 261 (325)
T cd05604 185 VLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP---GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD 261 (325)
T ss_pred eehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC---CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence 9999997 78766555544444433322332 456789999999999999999976 5999999999877654
Q ss_pred H
Q 001059 671 L 671 (1170)
Q Consensus 671 ~ 671 (1170)
.
T Consensus 262 ~ 262 (325)
T cd05604 262 L 262 (325)
T ss_pred H
Confidence 3
No 138
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.7e-36 Score=350.13 Aligned_cols=253 Identities=22% Similarity=0.363 Sum_probs=203.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT------------- 67 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-------------
Confidence 469999999999999999999999999975432 223345688899999888 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr 120 (327)
T cd05617 68 ---------------------------TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120 (327)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 457899999996 5899888887889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------DTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGV 184 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCC---------------CceecccCCcccCCHHHHCC-CCCCchheeehhHH
Confidence 999999999999999999999987421110 01134579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCch------hHHHHHHHHhhh-cCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHhcc
Q 001059 598 VFFELWH---PFSTA------MERQIVLSDLKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQDA 661 (1170)
Q Consensus 598 iL~ELlt---Pf~~~------~~~~~~~~~l~~-~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~~~ 661 (1170)
++|||++ ||... ...+.....+.. ...+| ...++.+.++|++||+.||.+|++ +.++++|+
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 9999997 77421 112222222222 22233 235678999999999999999997 57999999
Q ss_pred CCCCchHHHHH
Q 001059 662 LPPQMEYELLD 672 (1170)
Q Consensus 662 ~~~~~~~~~~~ 672 (1170)
||....++.+.
T Consensus 262 ~f~~~~~~~~~ 272 (327)
T cd05617 262 FFRSIDWDLLE 272 (327)
T ss_pred CCCCCCHHHHH
Confidence 99999877553
No 139
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=5.7e-36 Score=332.81 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=207.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||.|++|.||+|.+..+|+.||+|.+...... ......+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD------ 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc------
Confidence 4688999999999999999999999999999998754322 1234568899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.....+++..++.++.|++.||+|||
T Consensus 76 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 121 (263)
T cd06625 76 ----------------------------------DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121 (263)
T ss_pred ----------------------------------CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347899999997 589999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.||+||||||+||+++.++.++|+|||+++........ ........|++.|+|||++.+ ..++.++
T Consensus 122 ~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (263)
T cd06625 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 188 (263)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc------------cccccCCCcCccccCcceecc-CCCCchh
Confidence 999999999999999999999999999999754321100 000123468899999999988 5589999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||||++|||++ ||.............. ....+......++.+.++|++||..+|.+|||+.++++|+||
T Consensus 189 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred hhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999999999997 7765444433333322 222233334566789999999999999999999999999996
No 140
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.4e-37 Score=338.76 Aligned_cols=252 Identities=35% Similarity=0.561 Sum_probs=203.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++++.||+|+||+||+|++..+++.||+|++..............+|+.+++.++||||+++++.+..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------- 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD----------- 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----------
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----------
Confidence 789999999999999999999999999999998765544444455679999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
...++++||||++ +|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~ 120 (260)
T PF00069_consen 70 -----------------------------DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIV 120 (260)
T ss_dssp -----------------------------SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4678899999987 9999999888899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.++|+|||.+...... ........+|+.|+|||++.....++.++|||||
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 185 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSEN---------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSL 185 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTST---------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc---------------cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999753100 0112345789999999999833678999999999
Q ss_pred HHHHHHhhc---CCCch---hHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 596 GIVFFELWH---PFSTA---MERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~---~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+++|+|++ ||... ................ ........+++.++|++||+.||++||++.++++||||
T Consensus 186 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 186 GIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999997 77655 2222222221111000 01111123689999999999999999999999999996
No 141
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.4e-36 Score=350.39 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=201.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHH-HHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREV-ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev-~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||+|++...... ......+.+|. .+++.++||||+++++++.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~------------- 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------------- 67 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-------------
Confidence 3699999999999999999999999999753221 12223444444 45678899999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr 120 (325)
T cd05602 68 ---------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120 (325)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHN---------------GTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCC---------------CCcccccCCccccCHHHHcC-CCCCCccccccccH
Confidence 999999999999999999999997432110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH----HHHhccCCCCchHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT----ELLQDALPPQMEYEL 670 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~----eiL~~~~~~~~~~~~ 670 (1170)
++|||++ ||......+....+.......+ ...++.+.++|++||+.||.+||++. ++++|+|+....+.-
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~ 261 (325)
T cd05602 185 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDD 261 (325)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHH
Confidence 9999997 7876555554444433222222 34567899999999999999999865 899999998876543
No 142
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-36 Score=349.18 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=200.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||++++++|.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~------------- 67 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT------------- 67 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975322 1122344555554 6788999999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~ 120 (321)
T cd05603 68 ---------------------------AEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120 (321)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5898888887889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPE---------------ETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGA 184 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCC---------------CccccccCCcccCCHHHhcC-CCCCCcCcccccch
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~ 669 (1170)
++|||++ ||......+....+......+| ...+.++.++|.+||+.||.+||++ .++++|+|+....+.
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 185 VLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 9999997 7776655444444433332333 2456789999999999999999875 599999999887654
No 143
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.5e-36 Score=329.86 Aligned_cols=251 Identities=28% Similarity=0.519 Sum_probs=206.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|++|.||++.++.+++.||+|.+..........+.+.+|+.++++++||||+++++.|..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---------- 70 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----------
Confidence 5899999999999999999999999999999997655554556678899999999999999999876521
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|++||||+ ++|.+++... ..+++.+++.++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 71 -----------------------------EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred -----------------------------CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2346899999997 5898888753 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++||
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------DMASTLIGTPYYMSPELFSN-KPYNYKSDV 185 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------CccccccCCcCccChhHhcC-CCCCchhhh
Confidence 99999999999999999999999999997653211 01133468999999999887 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||............. .+..++.....++++.++|.+||+.||.+|||+.++++|||+
T Consensus 186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 186 WALGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999999997 665444333332222 233333344567899999999999999999999999999996
No 144
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1e-35 Score=329.21 Aligned_cols=250 Identities=31% Similarity=0.582 Sum_probs=209.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||+|.++.+|+.|++|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD---------- 70 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc----------
Confidence 5889999999999999999999999999999998765555566789999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 71 ------------------------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred ------------------------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 357899999996 5999988764 5689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||+++.+.... .......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---------------NFANTIVGTPYYLSPELCED-KPYNEKSDV 184 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCcc---------------chhhccccCccccCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999988653211 01123468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||.............. ...++.....++++.++|.+||+.+|++||++.++++|+|.
T Consensus 185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 185 WALGVVLYECCTGKHPFDANNQGALILKIIR--GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999996 7766655444433332 33333333566789999999999999999999999999874
No 145
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1e-35 Score=339.02 Aligned_cols=271 Identities=23% Similarity=0.381 Sum_probs=207.4
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
-...+++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++.+......
T Consensus 7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 34456889999999999999999999999999999999875543333344567899999999999999999987543100
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
........|++|||++++|.+.+.... .+++.+++.++.||+.||+|
T Consensus 87 --------------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~ 134 (310)
T cd07865 87 --------------------------------YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY 134 (310)
T ss_pred --------------------------------ccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 011245789999999999988887553 68999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++|+||||+||+++.++.+||+|||++.......... ........++..|+|||.+.+...++.
T Consensus 135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (310)
T cd07865 135 IHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK-----------PNRYTNRVVTLWYRPPELLLGERDYGP 203 (310)
T ss_pred HHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC-----------CCCccCcccCccccCcHHhcCCcccCc
Confidence 999999999999999999999999999999998653221100 011234568899999999877555789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCc-----------------------------cccCCHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-----------------------------WVAKFSEQ 636 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-----------------------------~~~~~~e~ 636 (1170)
++||||||+++|||++ ||................+..++. ....++.+
T Consensus 204 ~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (310)
T cd07865 204 PIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHA 283 (310)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHH
Confidence 9999999999999997 555443322221111111111110 00123567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.+||.+||+.||.+|||++++++|+||
T Consensus 284 ~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 284 LDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 899999999999999999999999997
No 146
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=6.7e-36 Score=341.62 Aligned_cols=263 Identities=27% Similarity=0.423 Sum_probs=209.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK----- 78 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC-----
Confidence 346899999999999999999999999999999999976543333334567899999999999999999887431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|+||||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH 125 (309)
T cd07845 79 ---------------------------------HLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH 125 (309)
T ss_pred ---------------------------------CCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 12467999999999998888753 56999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 126 ~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 190 (309)
T cd07845 126 ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---------------KPMTPKVVTLWYRAPELLLGCTTYTTAI 190 (309)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---------------CCCCcccccccccChhhhcCCCCcCchH
Confidence 9999999999999999999999999999998653211 0112335688999999987655689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CCC--------ccccCCHHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLL 640 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~--------~~~~~~~e~~~LI 640 (1170)
|||||||++|||++ ||......+.........+. .+. .....++++.++|
T Consensus 191 DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (309)
T cd07845 191 DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLL 270 (309)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHH
Confidence 99999999999997 66655444433322221110 000 0112467889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||+.||.+|||+.++++|+||....
T Consensus 271 ~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 271 NFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred HHHhcCChhhCcCHHHHhcChhhccCC
Confidence 999999999999999999999997654
No 147
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.1e-36 Score=335.80 Aligned_cols=254 Identities=27% Similarity=0.444 Sum_probs=202.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--------- 71 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee---------
Confidence 47899999999999999999999999999999987554333344567899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||++++ |..++.....+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 72 -------------------------------KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred -------------------------------CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35789999999874 5555555567999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+||+++.++.+||+|||++..+..... ......++..|+|||++.+...++.++|||
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 185 (286)
T cd07847 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---------------DYTDYVATRWYRAPELLVGDTQYGPPVDVW 185 (286)
T ss_pred ceecCCChhhEEEcCCCcEEECccccceecCCCcc---------------cccCcccccccCCHHHHhCCCCcCchhhhH
Confidence 99999999999999999999999999986532110 112346788999999987655688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCCC---------ccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~---------~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||......+.......... ..|. .+...++.+.+||.+
T Consensus 186 slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07847 186 AIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKG 265 (286)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHH
Confidence 99999999997 6655443332222111000 0010 122345678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 001059 643 LMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+.||++||++.+++.|+||
T Consensus 266 ~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 266 CLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HhcCCccccCCHHHHhcCCCC
Confidence 999999999999999999997
No 148
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=5.9e-36 Score=337.11 Aligned_cols=253 Identities=28% Similarity=0.478 Sum_probs=202.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+.++.||.|+||.||+|+++.+|+.||||.++...........+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----------- 69 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----------
Confidence 488999999999999999999999999999998765444444467889999999999999999998762
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|++|||++++|..++.. ...+++..++.++.||+.||+|||++|
T Consensus 70 -----------------------------~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 70 -----------------------------TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred -----------------------------cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2356799999999899888865 346899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.+||+|||++....... .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 185 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCc---------------cccccccccccccCCeEEecCCCCCcHHHHH
Confidence 9999999999999999999999999987543211 0112335788999999987755578899999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC------------------CC--------CccccCCHHHHHHHHHcc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------LP--------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~------------------~p--------~~~~~~~~e~~~LI~~~L 644 (1170)
||||++|||++ ||....+...........+. .+ ......++++.++|.+||
T Consensus 186 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07860 186 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQML 265 (284)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhc
Confidence 99999999997 66544433322222111110 00 011234568899999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.||.+|||+.++++||||
T Consensus 266 ~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 266 HYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCcccCCCHHHHhcCCCC
Confidence 9999999999999999997
No 149
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=7.8e-36 Score=337.47 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=198.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
..||+|++|.||+|.+ +|+.||||.++...... ...+.+.+|+.+|++++||||+++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~------------ 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV------------ 91 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc------------
Confidence 5799999999999988 59999999987543322 23467889999999999999999999885410
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 517 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~gIiHr 517 (1170)
....+++++||||+ |+|.+++.....+++.....++.|++.||.|||+ .+++||
T Consensus 92 ------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hr 147 (283)
T PHA02988 92 ------------------------DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYK 147 (283)
T ss_pred ------------------------cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 12356899999997 5899999888889999999999999999999998 499999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLG 596 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlG 596 (1170)
||||+|||++.++.+||+|||+++.+... ....+||+.|+|||++.+. ..++.++||||||
T Consensus 148 dlkp~nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 148 NLTSVSFLVTENYKLKIICHGLEKILSSP------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred cCChhhEEECCCCcEEEcccchHhhhccc------------------cccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 99999999999999999999999864321 1234689999999998752 4689999999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++|||++ ||......+......... ..++....+++++++||.+||+.||.+|||+.++++.
T Consensus 210 vil~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTKEIYDLIINKN-NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhcC-CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 99999997 887766555544433322 2233333567899999999999999999999999864
No 150
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.6e-36 Score=362.56 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=207.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++|||||+++++|..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------- 136 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS-------- 136 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--------
Confidence 4599999999999999999999877 788999977543 23344567889999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|
T Consensus 137 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 184 (478)
T PTZ00267 137 --------------------------------DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDE 184 (478)
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 599887653 3468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 250 (478)
T PTZ00267 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASSFCGTPYYLAPELWER-KRYSK 250 (478)
T ss_pred HHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc-------------cccccccCCCccccCHhHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 001234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||......+....... +..++.....++++.++|.+||..||++||++.+++.|+|+..
T Consensus 251 ~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 251 KADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876655554444433 2233333456779999999999999999999999999988765
Q ss_pred c
Q 001059 666 M 666 (1170)
Q Consensus 666 ~ 666 (1170)
.
T Consensus 329 ~ 329 (478)
T PTZ00267 329 V 329 (478)
T ss_pred H
Confidence 4
No 151
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.1e-35 Score=340.57 Aligned_cols=249 Identities=26% Similarity=0.420 Sum_probs=188.3
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------ 70 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSH------------ 70 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEecc------------
Confidence 589999999999999764 568899998864322 34578899999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|++|||++++|.+++... ..+++..++.++.||+.||+||
T Consensus 71 --------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 71 --------------------------SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred --------------------------CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24568999999999988877421 2488999999999999999999
Q ss_pred HhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 510 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|++||+||||||+|||+ +.++.+||+|||+++........ ........||+.|+|||++.+...
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc------------ccccCcceecccccCcHHhcCCCc
Confidence 99999999999999999 45678999999999865322100 011234578999999999987556
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHH---------HHHHHHhh--------------hcCCC--------------
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLK--------------QKGEL-------------- 625 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~l~--------------~~~~~-------------- 625 (1170)
++.++|||||||++|||++ ||....+. ........ .....
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN 272 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC
Confidence 8999999999999999997 55422110 00000000 00000
Q ss_pred -------CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 626 -------PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 626 -------p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
..........+.+||.+||+.||.+|||+.|+|+||||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 273 SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00001123457789999999999999999999999997
No 152
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-35 Score=352.26 Aligned_cols=258 Identities=25% Similarity=0.341 Sum_probs=202.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++||||++++++|..
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~----- 157 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW----- 157 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee-----
Confidence 3468999999999999999999864 35678999987532 235689999999999999999987732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||++.++|.+++.....+++..++.++.||+.||+|||
T Consensus 158 -----------------------------------~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH 202 (392)
T PHA03207 158 -----------------------------------KSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLH 202 (392)
T ss_pred -----------------------------------CCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999977788999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++.+..... ........||+.|+|||++.+ ..++.++
T Consensus 203 ~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 268 (392)
T PHA03207 203 GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-------------TPQCYGWSGTLETNSPELLAL-DPYCAKT 268 (392)
T ss_pred HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc-------------cccccccccccCccCHhHhcC-CCCCchh
Confidence 99999999999999999999999999999986532110 011234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcC-----------------------------CCCCcc--ccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-----------------------------ELPPSW--VAKF 633 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~-----------------------------~~p~~~--~~~~ 633 (1170)
|||||||++|||++ ||..... ......++...+ ..|+.. ...+
T Consensus 269 DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (392)
T PHA03207 269 DIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMH 348 (392)
T ss_pred hHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcc
Confidence 99999999999986 6654321 111111111000 001100 1234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHH
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 671 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~ 671 (1170)
.+++++|++||..||.+|||+.++|+||||.....+.+
T Consensus 349 ~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~ 386 (392)
T PHA03207 349 MDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL 386 (392)
T ss_pred hhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence 57889999999999999999999999999988776654
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=8.9e-36 Score=335.52 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=195.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+++++.+|+.||+|.+...... ......+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~----------------- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE----------------- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----------------
Confidence 79999999999999999999999998643322 112334567999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+|++|||++ ++|.+++.... .+++..+..++.||+.||+|||++||+|||
T Consensus 64 -----------------------~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 64 -----------------------SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred -----------------------cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 2457899999996 58888775433 588999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~ 183 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGK----------------TITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCS 183 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCc----------------eeeccCCCCCccCHHHHcc-CCCCCchhHHHHHHH
Confidence 99999999999999999999987643111 1123468999999999987 458999999999999
Q ss_pred HHHhhc---CCCchhH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCch
Q 001059 599 FFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQME 667 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~ 667 (1170)
+|||++ ||..... .+...... ....+......++++.+||++||+.||.+||++ .+++.|+||....
T Consensus 184 l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 184 IYEMVAGRTPFKDHKEKVAKEELKRRTL--EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred HHHHHhCCCCCCCCcchhhHHHHHHHhh--ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 999997 7754322 11111111 112222233567899999999999999999999 6788999998876
Q ss_pred HH
Q 001059 668 YE 669 (1170)
Q Consensus 668 ~~ 669 (1170)
+.
T Consensus 262 ~~ 263 (277)
T cd05607 262 FP 263 (277)
T ss_pred HH
Confidence 54
No 154
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-36 Score=350.71 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=224.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+.-...|.+...||+|.|++|.+|++..+|..||||.|+.........+.+.+|+++|+.++|||||+++.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~------ 125 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE------ 125 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee------
Confidence 34467899999999999999999999999999999999877666666677999999999999999999998762
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|+||||+. |.+.+++...+++.+..+..++.|+++|++||
T Consensus 126 ----------------------------------t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYc 171 (596)
T KOG0586|consen 126 ----------------------------------TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYC 171 (596)
T ss_pred ----------------------------------ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHH
Confidence 2568999999995 79999999999999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+++|||||||.+|||++.+.++||+|||++.++..... ..+.||++.|+|||++.+..+.++.
T Consensus 172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------lqt~cgsppyAaPEl~~g~~y~gpe 235 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------LQTFCGSPPYAAPELFNGKKYDGPE 235 (596)
T ss_pred hhcceeccccchhhcccccccceeeeccccceeeccccc----------------ccccCCCCCccChHhhcCcccCCcc
Confidence 999999999999999999999999999999998754332 2457999999999999998878899
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|+||+|++||-|+. ||.+..-.+.....+..+..+|-.. +.++.++|+++|-.+|.+|++.+++..|.|..-.
T Consensus 236 ~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m---s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 236 VDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM---SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred eehhhhhhhheeeeecccccCCcccccccchheeeeeccccee---echhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 999999999999986 9987665555555555566666543 3489999999999999999999999999987654
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 313 ~ 313 (596)
T KOG0586|consen 313 L 313 (596)
T ss_pred h
Confidence 3
No 155
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.9e-35 Score=334.84 Aligned_cols=255 Identities=29% Similarity=0.451 Sum_probs=212.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++++++||||+++++++.+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-------- 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--------
Confidence 479999999999999999999999999999999875332 22345678899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||+ +++|.+++.....+++..+..++.||+.||.|||++
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 73 --------------------------------DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 45789999999 469999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||+|+|||++.++.+||+|||++...... .....|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di 181 (290)
T cd05580 121 DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------------------TYTLCGTPEYLAPEIILS-KGYGKAVDW 181 (290)
T ss_pred CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------------------CCCCCCCccccChhhhcC-CCCCccccH
Confidence 9999999999999999999999999998764211 123468999999999877 467899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~ 664 (1170)
||||+++|+|++ ||..................+|. ..++.++++|.+||..||.+|+ +++++++|+|+.
T Consensus 182 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 258 (290)
T cd05580 182 WALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS---FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFA 258 (290)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc---cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccc
Confidence 999999999997 77655544433333332333333 3467899999999999999999 999999999998
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+...
T Consensus 259 ~~~~~~~ 265 (290)
T cd05580 259 GIDWIAL 265 (290)
T ss_pred cCCHHHH
Confidence 8875543
No 156
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=352.47 Aligned_cols=248 Identities=29% Similarity=0.429 Sum_probs=207.1
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
+||+|.||+||-|+++.|...+|||.|..++ .+..+-+.+|+.+.+.|+|.|||+|+|++-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~se---------------- 643 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSE---------------- 643 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCC----------------
Confidence 6999999999999999999999999986543 3456678899999999999999999998732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
..++-|.||-+| |+|..+|+.. +++ .+...-.|.+||++||.|||.+.||||
T Consensus 644 ------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR 699 (1226)
T KOG4279|consen 644 ------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR 699 (1226)
T ss_pred ------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence 347789999997 5999998754 566 788889999999999999999999999
Q ss_pred CCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc-CCCCCCccchhHHH
Q 001059 518 DLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-GWPKIDEKADMYSL 595 (1170)
Q Consensus 518 DLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~~~ksDIwSl 595 (1170)
|||-+|+||+. .|.+||+|||-++.+.. ......++.||..|||||++. |...|+.++|||||
T Consensus 700 DIKGDNVLvNTySGvlKISDFGTsKRLAg---------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 700 DIKGDNVLVNTYSGVLKISDFGTSKRLAG---------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred cccCCcEEEeeccceEEecccccchhhcc---------------CCccccccccchhhhChHhhccCCcCCCchhhhhhc
Confidence 99999999974 69999999999997632 223346688999999999985 44559999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||++.||.| ||......+..+-.+-.-...|+.+...+.++++||.+|+.+||.+||+|.++|++||.+..
T Consensus 765 GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 765 GCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred cceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999998 88766555554443333334566666677799999999999999999999999999987655
No 157
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3e-35 Score=335.85 Aligned_cols=275 Identities=23% Similarity=0.355 Sum_probs=214.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------- 71 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe---------
Confidence 479999999999999999999999999999999875432 1233457889999999999999999998773
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++|++|||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 120 (305)
T cd05609 72 -------------------------------TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY 120 (305)
T ss_pred -------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999997 49999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||+++............................|++.|+|||.+.+ ..++.++|+
T Consensus 121 ~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 199 (305)
T cd05609 121 GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDW 199 (305)
T ss_pred CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhH
Confidence 9999999999999999999999999998742211100000000000000111223468899999999876 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~ 666 (1170)
|||||++|||++ ||......+............|......++++.++|++||+.||.+||+ +.++++|+|+...
T Consensus 200 ~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999999999997 7766555444444333333334333356778999999999999999997 7999999999877
Q ss_pred hHHH
Q 001059 667 EYEL 670 (1170)
Q Consensus 667 ~~~~ 670 (1170)
.+..
T Consensus 280 ~~~~ 283 (305)
T cd05609 280 DWNG 283 (305)
T ss_pred CHHH
Confidence 6543
No 158
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.2e-35 Score=342.83 Aligned_cols=264 Identities=19% Similarity=0.284 Sum_probs=201.7
Q ss_pred EEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 359 ELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 359 ~~~~LG~G--~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
++++||+| +||+||++.++.+|+.||+|.++...........+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----------- 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----------- 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----------
Confidence 46789999 78999999999999999999997665544555678889999999999999999988843
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 71 -----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 71 -----------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred -----------------------------CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999997 589888864 345899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchh
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDI 592 (1170)
|+||||||+|||++.++.++++|||.+.......... .. .........++..|+|||++.+. ..++.++||
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 193 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL--RV------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 193 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccc--cc------cccccccccceecccChHHhhcccCCCCchhhH
Confidence 9999999999999999999999998765432111000 00 00001223578889999998753 358899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------C------------------------------------C
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------L------------------------------------P 626 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------~------------------------------------p 626 (1170)
|||||++|||++ ||.................. . .
T Consensus 194 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
T cd08227 194 YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH 273 (327)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence 999999999997 77644333322222111000 0 0
Q ss_pred CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHH
Q 001059 627 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYEL 670 (1170)
Q Consensus 627 ~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~ 670 (1170)
+.....++++.+||.+||+.||++|||++++++||||.+.....
T Consensus 274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~~~ 317 (327)
T cd08227 274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA 317 (327)
T ss_pred ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcchhh
Confidence 01112356789999999999999999999999999998765443
No 159
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-35 Score=356.16 Aligned_cols=249 Identities=27% Similarity=0.337 Sum_probs=196.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|++++|||||++++++..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------- 231 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVV-------- 231 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 457999999999999999999999999999999642 1235689999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++||++.++|..++... ..+++..++.++.||+.||+|||++
T Consensus 232 --------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 279 (461)
T PHA03211 232 --------------------------------GGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE 279 (461)
T ss_pred --------------------------------CCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467899999999999888654 4699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.++||
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDv 345 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------TPFHYGIAGTVDTNAPEVLAG-DPYTPSVDI 345 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-------------cccccccCCCcCCcCHHHHcC-CCCCchHHH
Confidence 999999999999999999999999999986532110 001134579999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCCch--------hHHHHHHHHhhhcC----CCC-------------------------Cccc--
Q 001059 593 YSLGIVFFELWH---PFSTA--------MERQIVLSDLKQKG----ELP-------------------------PSWV-- 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~--------~~~~~~~~~l~~~~----~~p-------------------------~~~~-- 630 (1170)
|||||+||||++ |+... ...+ ...++.... .++ +.|.
T Consensus 346 wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~-l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
T PHA03211 346 WSAGLVIFEAAVHTASLFSASRGDERRPYDAQ-ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY 424 (461)
T ss_pred HHHHHHHHHHHHcCCCcccCCcccccCCcHHH-HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence 999999999974 22211 1111 111111100 001 1111
Q ss_pred -cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 631 -AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 631 -~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
...+++.+||.+||+.||.+|||+.|+|+|+||..
T Consensus 425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 425 YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 23457889999999999999999999999999975
No 160
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8e-36 Score=332.92 Aligned_cols=252 Identities=23% Similarity=0.426 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-------- 77 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-------- 77 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--------
Confidence 3689999999999999999999999999999999875432 234567889999999999999999988733
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++||||+ ++|.+++...+.+++.+++.++.|++.||+|||++
T Consensus 78 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 125 (267)
T cd06645 78 --------------------------------RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
|++|+||||+||+++.++.+||+|||++....... .......||+.|+|||++.. ...++.++
T Consensus 126 ~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 190 (267)
T cd06645 126 GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLC 190 (267)
T ss_pred CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc---------------cccccccCcccccChhhhccccCCCCCchh
Confidence 99999999999999999999999999987542110 01234578999999998742 24578999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+|||||++|+|++ ||....+..............+. .....+..+.++|.+||+.+|++||+++++++|||
T Consensus 191 DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99999999999987 66544333332222221111111 11234568899999999999999999999999997
No 161
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-37 Score=334.48 Aligned_cols=264 Identities=25% Similarity=0.394 Sum_probs=223.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
..-..+|..+.+||+|+||+|.+|..+.+.+.||||+++..-. ...+.+.-..|-.+|+.. +-|.+++++.||
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF----- 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF----- 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence 4456899999999999999999999999999999999875321 112233445677777666 467888888776
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+....+|+||||+. |+|...+++.++|.++.|..|+.+|+-||-
T Consensus 420 -----------------------------------QTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLF 464 (683)
T KOG0696|consen 420 -----------------------------------QTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLF 464 (683)
T ss_pred -----------------------------------hhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhh
Confidence 34578999999995 699999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|||+||||.+|||++.+|++||+|||+++.---+ ..+..++||||.|+|||++.. +.|+
T Consensus 465 FLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~---------------~~TTkTFCGTPdYiAPEIi~Y-qPYg 528 (683)
T KOG0696|consen 465 FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD---------------GVTTKTFCGTPDYIAPEIIAY-QPYG 528 (683)
T ss_pred hhhcCCeeeeeccccceEeccCCceEeeecccccccccC---------------CcceeeecCCCcccccceEEe-cccc
Confidence 999999999999999999999999999999999842111 123467899999999999987 6799
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~ 659 (1170)
.++|+||+||+||||+. ||.+.++.+....+...+...|.+++ .++.++.+.+|.+.|.+|.. -.+|-.
T Consensus 529 ksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS---kEAv~ickg~ltK~P~kRLGcg~~ge~di~~ 605 (683)
T KOG0696|consen 529 KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS---KEAVAICKGLLTKHPGKRLGCGPEGERDIRE 605 (683)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc---HHHHHHHHHHhhcCCccccCCCCccccchhh
Confidence 99999999999999995 99999999999988888888887654 59999999999999999974 467899
Q ss_pred ccCCCCchHHHHHH
Q 001059 660 DALPPQMEYELLDN 673 (1170)
Q Consensus 660 ~~~~~~~~~~~~~~ 673 (1170)
||||....|+-+..
T Consensus 606 H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 606 HPFFRRIDWEKLER 619 (683)
T ss_pred CcchhhccHHHHhh
Confidence 99999999886544
No 162
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.1e-35 Score=336.87 Aligned_cols=257 Identities=29% Similarity=0.433 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||+|.++.+++.||+|.++...........+.+|+.++++++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------- 76 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------- 76 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec-------
Confidence 4689999999999999999999999999999999986554434445678899999999999999999887432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+...+|++|||++++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 77 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 125 (293)
T cd07843 77 -------------------------------NLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN 125 (293)
T ss_pred -------------------------------CCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 135789999999999999887644 589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 126 ~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di 190 (293)
T cd07843 126 WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL---------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDM 190 (293)
T ss_pred CeeeccCCHHHEEECCCCcEEEeecCceeeccCCc---------------cccccccccccccCchhhcCCccccchhhH
Confidence 99999999999999999999999999998653221 011234678999999998775557899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC---------------------------CCCcccc--CCHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------LPPSWVA--KFSEQESLL 640 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------~p~~~~~--~~~e~~~LI 640 (1170)
||||+++|+|++ ||................+. +...+.. .++.+.++|
T Consensus 191 ~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (293)
T cd07843 191 WSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLL 270 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHH
Confidence 999999999997 55543332222211110000 0011112 356789999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 001059 641 RRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
++||+.||++|||+.++++|+||
T Consensus 271 ~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 271 NRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHhccCccccCCHHHHhcCCCC
Confidence 99999999999999999999997
No 163
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.2e-36 Score=345.60 Aligned_cols=266 Identities=24% Similarity=0.398 Sum_probs=210.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.++.+|+.||+|++............+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 77 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG------- 77 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-------
Confidence 6899999999999999999999999999999999765444445567889999999999999999987763210
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
.....+|+||||++++|.+++.....+++..++.++.||+.||+|||++||
T Consensus 78 -----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 78 -----------------------------ADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred -----------------------------CCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 124578999999999999999887889999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||++......... .........|+..|+|||.+.+...++.++||||
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 197 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-----------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-----------CCcccccccccccccChHHhcCCcccccccchHH
Confidence 99999999999999999999999999765322110 0011134578999999999876556899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhh-----------------------cCCCCC-----ccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQ-----------------------KGELPP-----SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~-----------------------~~~~p~-----~~~~~~~e~~~LI~~~ 643 (1170)
|||++|||++ ||............... ....++ .....++++.++|++|
T Consensus 198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 9999999996 66443221111110000 000001 1134567899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.+|.+|||+.++++|+|+.+..
T Consensus 278 l~~~P~~Rpt~~~~l~~~~~~~~~ 301 (334)
T cd07855 278 LQFDPEERITVEQALQHPFLAQYH 301 (334)
T ss_pred ccCChhhCcCHHHHHhChhhhhcc
Confidence 999999999999999999998765
No 164
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=2.9e-35 Score=328.01 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=206.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+|++.+.||.|+||+||+|... +|+.+|+|.+...... ......+.+|+.+|+.++||||++++++|.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD------ 73 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec------
Confidence 4778899999999999999874 7899999998754322 2233568899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||
T Consensus 74 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 119 (265)
T cd06631 74 ----------------------------------DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119 (265)
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997 499999988788999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.||+|+||||+||+++.++.+||+|||++.......... ..........|++.|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~ 189 (265)
T cd06631 120 NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG---------THSNMLKSMHGTPYWMAPEVINE-SGYGRKS 189 (265)
T ss_pred hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc---------cccccccccCCCccccChhhhcC-CCCcchh
Confidence 9999999999999999999999999999998653211000 00111234568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||||++|+|++ ||...................++.....+.++.++|++||+.+|.+||++.++++|||+
T Consensus 190 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred hHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999997 77654443333333332233444445567789999999999999999999999999996
No 165
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=2.2e-35 Score=337.59 Aligned_cols=252 Identities=26% Similarity=0.414 Sum_probs=203.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||++.+..+|..||+|.++... ......++.+|+.+++.++||||++++++|..
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--------- 70 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 47999999999999999999999999999999987532 33445678899999999999999999998843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~ 512 (1170)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+ +
T Consensus 71 -------------------------------~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 71 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred -------------------------------CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 357899999997 5999999888889999999999999999999998 5
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+++||||||+|||++.++.+||+|||++...... .....+|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Di 181 (308)
T cd06615 120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYTVQSDI 181 (308)
T ss_pred CEEECCCChHHEEEecCCcEEEccCCCccccccc-----------------ccccCCCCcCccChhHhcC-CCCCccchH
Confidence 8999999999999999999999999998754211 0133578999999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------------------------CCCCc--cccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------------------ELPPS--WVAKF 633 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------------------------~~p~~--~~~~~ 633 (1170)
|||||++|+|++ ||......... ....... ..++. ....+
T Consensus 182 wslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T cd06615 182 WSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260 (308)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccC
Confidence 999999999997 66433221111 1110000 00010 01245
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+++.+||.+||..||++|||+.++++|+|+.+.
T Consensus 261 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 261 DEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 689999999999999999999999999999764
No 166
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=338.69 Aligned_cols=266 Identities=28% Similarity=0.424 Sum_probs=217.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+.|...++||+||||.||-|+.+.||+.||+|++.++..... -....++|-.+|.+++.|.||.+-.+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------- 254 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------- 254 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee---------
Confidence 4788999999999999999999999999999999865442222 234578899999999999999987666
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+....+++||..|. |+|.-++-+.+ .|+++.++.|+.+|+.||++|
T Consensus 255 -------------------------------eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl 303 (591)
T KOG0986|consen 255 -------------------------------ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL 303 (591)
T ss_pred -------------------------------cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH
Confidence 23578999999996 59988876655 799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|..+||+|||||+|||+|+.|+++|+|.|+|..+.... ..++.+||.+|||||++++ ..|+..
T Consensus 304 H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~----------------~~~~rvGT~GYMAPEvl~n-e~Y~~s 366 (591)
T KOG0986|consen 304 HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK----------------PIRGRVGTVGYMAPEVLQN-EVYDFS 366 (591)
T ss_pred HhcceeeccCChhheeeccCCCeEeeccceEEecCCCC----------------ccccccCcccccCHHHHcC-CcccCC
Confidence 99999999999999999999999999999999764332 1355699999999999998 559999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 657 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~ei 657 (1170)
.|+|||||+||||+. ||....+. ++....+.....++ ...++++++|.+.+|++||.+|. ++.++
T Consensus 367 ~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~ev 443 (591)
T KOG0986|consen 367 PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEV 443 (591)
T ss_pred ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhccCCCcCcchh
Confidence 999999999999994 88765442 23333333333344 35567999999999999999997 67899
Q ss_pred HhccCCCCchHHHHHHHHHhcCCC
Q 001059 658 LQDALPPQMEYELLDNILRMMHSS 681 (1170)
Q Consensus 658 L~~~~~~~~~~~~~~~~~~~~~~~ 681 (1170)
.+||||+.+.|.-+ ...++.+|
T Consensus 444 k~HpfFk~lnw~rl--eagml~PP 465 (591)
T KOG0986|consen 444 KEHPFFKDLNWRRL--EAGMLEPP 465 (591)
T ss_pred hhCcccccCCHhHH--hccCCCCC
Confidence 99999999887644 33444433
No 167
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.2e-35 Score=332.31 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=200.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||.||+|.+..+++.||+|++... ........+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--------- 70 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE---------
Confidence 4788999999999999999999999999999998754 233445678999999999999999999998743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+++|||+++ +|... ..+++..+..++.||+.||+|||++|
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 71 -------------------------------ENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred -------------------------------CCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3567899999986 55433 35789999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|+||||+|||++.++.+||+|||++...... ..+..+||+.|+|||++.+ ..++.++|+|
T Consensus 116 i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvw 177 (279)
T cd06619 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-----------------IAKTYVGTNAYMAPERISG-EQYGIHSDVW 177 (279)
T ss_pred EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----------------cccCCCCChhhcCceeecC-CCCCCcchHH
Confidence 999999999999999999999999999754211 1234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHH------HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 594 SLGIVFFELWH---PFSTAMERQ------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~------~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
||||++|+|++ ||....... ...................++++.++|.+||+.||.+||++.++++|+|+.
T Consensus 178 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 178 SLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred HHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 99999999997 665322110 111111111111111233567899999999999999999999999999998
Q ss_pred CchHH
Q 001059 665 QMEYE 669 (1170)
Q Consensus 665 ~~~~~ 669 (1170)
+....
T Consensus 258 ~~~~~ 262 (279)
T cd06619 258 QYNDG 262 (279)
T ss_pred cccCc
Confidence 76543
No 168
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.9e-35 Score=332.57 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=200.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||.||+|.++.+|+.||||.++...... ...++..|+.. ++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------- 71 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFR-------- 71 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEec--------
Confidence 47999999999999999999999999999999987654332 23456666665 666799999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++|||++++|.+++.. ...+++..++.++.||+.||+||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 72 --------------------------------EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred --------------------------------CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999988877753 24689999999999999999999
Q ss_pred HhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CC
Q 001059 510 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 585 (1170)
Q Consensus 510 Hs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 585 (1170)
|++ +++||||||+|||++.++.+||+|||++....... ..+...|+..|+|||++.+. ..
T Consensus 120 H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~ 183 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELNQKG 183 (283)
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc----------------ccccccCCccccChhhcCCcccccc
Confidence 997 99999999999999999999999999987642110 11234688999999988642 23
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|+|||||++|+|++ ||..... .+....... ...+.. ....+.++.++|.+||..+|.+||++.++++|
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6889999999999999997 6653222 122222221 111111 12356789999999999999999999999999
Q ss_pred cCCCCchHH
Q 001059 661 ALPPQMEYE 669 (1170)
Q Consensus 661 ~~~~~~~~~ 669 (1170)
+|+......
T Consensus 262 ~~~~~~~~~ 270 (283)
T cd06617 262 PFFELHLSK 270 (283)
T ss_pred chhhhcccc
Confidence 999887543
No 169
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.4e-36 Score=351.56 Aligned_cols=250 Identities=28% Similarity=0.404 Sum_probs=200.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-C-----CCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H-----QHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-H-----pnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||+|+||.|.+|.+..|++.||||+++.+ .....+...|+.+|..|+ | -|+|+++++|+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f---- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF---- 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc----
Confidence 899999999999999999999999999999999743 345667788999999997 4 489999999842
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~ 507 (1170)
..++|||+|.+..+|++++.... +++...++.|+.||+.||.
T Consensus 260 ------------------------------------r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~ 303 (586)
T KOG0667|consen 260 ------------------------------------RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALL 303 (586)
T ss_pred ------------------------------------ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999998654 6999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCC--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
+||..||||+||||+||||.+. ..|||+|||.|++.... ..+++-+..|.|||++.| ..
T Consensus 304 ~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~------------------vytYiQSRfYRAPEVILG-lp 364 (586)
T KOG0667|consen 304 FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR------------------VYTYIQSRFYRAPEVILG-LP 364 (586)
T ss_pred HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc------------------ceeeeeccccccchhhcc-CC
Confidence 9999999999999999999764 57999999999975322 124577889999999999 57
Q ss_pred CCccchhHHHHHHHHHhhc--CCCch-hHHHHHHHHhhhcC---------------------------------------
Q 001059 586 IDEKADMYSLGIVFFELWH--PFSTA-MERQIVLSDLKQKG--------------------------------------- 623 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt--Pf~~~-~~~~~~~~~l~~~~--------------------------------------- 623 (1170)
|+.+.||||||||+.||++ |+.+. ++.+.+..+..--+
T Consensus 365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~ 444 (586)
T KOG0667|consen 365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP 444 (586)
T ss_pred CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence 9999999999999999997 44333 22222211111000
Q ss_pred -------------CCCCc---cc-----cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 624 -------------ELPPS---WV-----AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 624 -------------~~p~~---~~-----~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..|+. +. ..-..+.+||++||..||.+|+|+.++|+|||+....
T Consensus 445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 01100 00 0012457999999999999999999999999998654
No 170
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.4e-35 Score=326.78 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=208.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||+||+|.+..++..+|+|++....... ....+.+|+.+|+.++||||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--------- 70 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee---------
Confidence 47999999999999999999999899999999987554433 56789999999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh 119 (267)
T cd06610 71 -------------------------------GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999997 5898888753 45899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||++++++.+||+|||++..+....... .......+|++.|+|||++.....++.++
T Consensus 120 ~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-----------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~ 188 (267)
T cd06610 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT-----------RKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188 (267)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-----------ccccccccCChhhcChHHHccccCcCccc
Confidence 9999999999999999999999999999998764322110 00123346899999999988744689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCc--cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPS--WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~--~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+|||||++|+|++ ||.................. .+.. +...++.+.+++.+||..||.+||++.++++||||
T Consensus 189 Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 189 DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred chHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999999999997 77655554444443332211 1111 13556788999999999999999999999999997
No 171
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.8e-35 Score=326.47 Aligned_cols=257 Identities=28% Similarity=0.451 Sum_probs=205.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||.||+|.+..+|..||||.+...... ......+.+|+.+++.++||||++++++|.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 5899999999999999999999999999999998654322 23346788999999999999999999887432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|++|||++ ++|.+++.....+++..+..++.|++.||+|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (265)
T cd06652 77 ---------------------------------MERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123 (265)
T ss_pred ---------------------------------CCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999997 589999888778999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||||+|||++.++.+||+|||+++........ ........|+..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (265)
T cd06652 124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 190 (265)
T ss_pred hCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc------------ccccccCCCCccccChhhhcC-CCCCcch
Confidence 999999999999999999999999999999865321100 001123468999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||||++|||++ ||.............. ....+......+..+.++|.+||. +|.+||+++++++|+|+.
T Consensus 191 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999999999996 7765444333333222 222233333455678999999995 999999999999999963
No 172
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3e-35 Score=331.17 Aligned_cols=255 Identities=29% Similarity=0.463 Sum_probs=204.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH---------- 70 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec----------
Confidence 5889999999999999999999999999999998765444456779999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|+||||++++|.+++.. ...+++.+++.++.||+.||+|||++|+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 71 ------------------------------GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred ------------------------------CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 457899999997799998864 4569999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||||+||+++.++.++|+|||++........ .......|+..|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 186 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP--------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--------------CccccccCcccccCceeeeccccCCchhHHHH
Confidence 9999999999999999999999999986532110 01123478999999999876556789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CC--------CccccCCHHHHHHHHHcc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP--------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p--------~~~~~~~~e~~~LI~~~L 644 (1170)
+||++|||++ ||....+.......+...+. .+ ......+.++.++|.+||
T Consensus 187 lG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 266 (286)
T cd07832 187 VGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLL 266 (286)
T ss_pred HHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHh
Confidence 9999999997 44433332222221111000 00 011234568899999999
Q ss_pred CCCCCCCCCHHHHHhccCCC
Q 001059 645 SPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~ 664 (1170)
+.||.+|||++++++|+||.
T Consensus 267 ~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 267 VYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccChhhCCCHHHHhhCcCcC
Confidence 99999999999999999973
No 173
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-35 Score=345.95 Aligned_cols=261 Identities=28% Similarity=0.409 Sum_probs=204.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 88 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK----- 88 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC-----
Confidence 357899999999999999999999999999999998754444445567889999999999999999998874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+...+|+|||||+++|.+.+... +++..+..++.||+.||+|||++
T Consensus 89 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~ 137 (353)
T cd07850 89 -----------------------------SLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA 137 (353)
T ss_pred -----------------------------CccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC
Confidence 00123467999999999999887654 89999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||
T Consensus 138 gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 200 (353)
T cd07850 138 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDI 200 (353)
T ss_pred CeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------CCCCCcccccccCHHHHhC-CCCCCchhh
Confidence 99999999999999999999999999997542111 1133468899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC------------------------------------CCCc----c
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------------------LPPS----W 629 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~------------------------------------~p~~----~ 629 (1170)
|||||++|+|++ ||................+. .+.. .
T Consensus 201 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (353)
T cd07850 201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN 280 (353)
T ss_pred HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccccc
Confidence 999999999996 66543322211111110000 0000 1
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 630 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
...++.+.++|.+||+.||.+|||+.++|+|+|+...
T Consensus 281 ~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 281 KLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred ccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 1224467899999999999999999999999987643
No 174
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.6e-35 Score=330.55 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-------- 77 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLS-------- 77 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEe--------
Confidence 4689999999999999999999999999999999875432 234567889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 78 --------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 78 --------------------------------REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999997 58999988878899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ...++.++
T Consensus 126 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 190 (267)
T cd06646 126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC 190 (267)
T ss_pred CccccCCCHHHEEECCCCCEEECcCccceeecccc---------------cccCccccCccccCHhHcccccCCCCcchh
Confidence 99999999999999999999999999998652110 01133568999999998753 23478899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|||||||++|||++ ||................... +......++.+.+||++||+.+|.+|||++++++|+|
T Consensus 191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999999999997 664433322221111111111 1122345678999999999999999999999999976
No 175
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.4e-35 Score=336.78 Aligned_cols=275 Identities=28% Similarity=0.444 Sum_probs=215.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------- 71 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------- 71 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee---------
Confidence 47899999999999999999999899999999997654332 34567889999999999999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....|++|||+. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 72 -------------------------------TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred -------------------------------cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999988754 46999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC--CC------------CCCCCccccCcccccCccCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--FP------------TDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
++|++||||||+||+++.++.++|+|||++............. .. .............+||..|+|
T Consensus 121 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~a 200 (316)
T cd05574 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIA 200 (316)
T ss_pred HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcC
Confidence 9999999999999999999999999999998653221100000 00 000000111234579999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
||++.+ ..++.++||||||+++|+|++ ||...................+. ....++.+.++|.+||+.||.+|||
T Consensus 201 PE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 201 PEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG-SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred HHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC-ccccCHHHHHHHHHHccCCHhHCCC
Confidence 999987 568999999999999999997 77655554444444432333332 2235778999999999999999999
Q ss_pred ----HHHHHhccCCCCchHHHH
Q 001059 654 ----ATELLQDALPPQMEYELL 671 (1170)
Q Consensus 654 ----a~eiL~~~~~~~~~~~~~ 671 (1170)
++++++|+||.+..+..+
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~ 300 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALI 300 (316)
T ss_pred chhhHHHHHcCchhhcCChhhc
Confidence 999999999998776544
No 176
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.5e-35 Score=333.84 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=203.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.+..+|+.||||+++...........+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE------ 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC------
Confidence 4789999999999999999999999999999998765443334467889999999995 699999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|++|||++++|.+++... ..+++..++.++.||+.||.|
T Consensus 75 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 125 (295)
T cd07837 75 -----------------------------KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAH 125 (295)
T ss_pred -----------------------------CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123458999999999998887642 357999999999999999999
Q ss_pred HHhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||++||+||||||+||+++. ++.+||+|||++..+.... ...+...+++.|+|||++.+...++
T Consensus 126 LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~ 190 (295)
T cd07837 126 CHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV---------------KSYTHEIVTLWYRAPEVLLGSTHYS 190 (295)
T ss_pred HHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc---------------cccCCcccccCCCChHHhhCCCCCC
Confidence 99999999999999999998 8899999999987542111 0112336789999999887645689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CC--------CccccCCHHHHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LP--------PSWVAKFSEQESL 639 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p--------~~~~~~~~e~~~L 639 (1170)
.++||||||+++|+|++ ||....+............. .+ ......++++.+|
T Consensus 191 ~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (295)
T cd07837 191 TPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDL 270 (295)
T ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHH
Confidence 99999999999999997 66554443333222211000 00 0112456788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCC
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|.+||..||.+||++.++++|+|++
T Consensus 271 i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 271 LQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHccCChhhcCCHHHHhcCCCcC
Confidence 9999999999999999999999984
No 177
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3e-35 Score=335.54 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=192.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCcee
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~----------------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~ 418 (1170)
++|++.++||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+|++++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578999999999999999998642 3457999998743 23334567899999999999999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 488 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 488 (1170)
++++|.+ ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 84 LLGVCVD----------------------------------------EDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred EEEEEec----------------------------------------CCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 9998743 245799999996 58998875431
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCC
Q 001059 489 ----------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 558 (1170)
Q Consensus 489 ----------~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 558 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~---------- 193 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY---------- 193 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce----------
Confidence 367788999999999999999999999999999999999999999999999975432110
Q ss_pred CCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHH---hhhc--CCCCCc
Q 001059 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSD---LKQK--GELPPS 628 (1170)
Q Consensus 559 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~---l~~~--~~~p~~ 628 (1170)
........+++.|||||++.+ ..++.++|||||||++|||++ ||......+..... .... ...+..
T Consensus 194 ---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
T cd05096 194 ---YRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFR 269 (304)
T ss_pred ---eEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccC
Confidence 001123356789999999876 568999999999999999974 66654433322111 1111 111122
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 629 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
...+++.+.+||.+||+.||.+|||+.+|.+
T Consensus 270 ~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 270 PPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 2345678999999999999999999999965
No 178
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.8e-35 Score=327.69 Aligned_cols=257 Identities=27% Similarity=0.456 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|+..+.||+|+||.||+|.+..+|..||+|++.....+ ......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR----- 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC-----
Confidence 4788999999999999999999999999999998754322 23345688999999999999999999887431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....++++|||++ ++|.+++.....+++...+.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 77 ---------------------------------AEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred ---------------------------------CCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1356899999997 589999988778999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|+||||||+||+++.++.+||+|||++..+...... ........++..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (266)
T cd06651 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS------------GTGIRSVTGTPYWMSPEVISG-EGYGRKA 190 (266)
T ss_pred hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc------------CCccccCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999765321100 001123468899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||||++|||++ ||.............. ....|......++.++++| +||..+|++||+++++++||||+
T Consensus 191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999999999997 7765544333332222 2222222234456788888 67778999999999999999985
No 179
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4e-35 Score=325.58 Aligned_cols=251 Identities=26% Similarity=0.449 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..+++.+|+|++...... ..+.+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLR--------- 71 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEe---------
Confidence 6899999999999999999999989999999999865433 45678999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 72 -------------------------------RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999975 888888765 6899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ks 590 (1170)
||+|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+. +.++.++
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~ 185 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKC 185 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccccchhhhhhh---------------hccccccCCccccCchhhcccccCCcCchh
Confidence 99999999999999999999999999998653211 011234788999999998763 2578899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC--CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~--~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+|||||++|+|++ ||.................. ........+.++.++|++||+.+|.+|||+.+++.|+|
T Consensus 186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999999999997 77655444333322222111 11122334568899999999999999999999999987
No 180
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.2e-35 Score=333.80 Aligned_cols=255 Identities=27% Similarity=0.412 Sum_probs=202.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|+..+.||+|+||+||+|.+..+++.||+|.+...... ......+.+|+.+++.++|+||+++++.+.+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--------- 71 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec---------
Confidence 377889999999999999999999999999998754322 2223457789999999999999999987732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+.+... ..+++..+..++.|++.||.|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05630 72 -------------------------------KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ 120 (285)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5898887543 358999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05630 121 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----------------cccCCCCCccccChHHHcC-CCCCCccc
Confidence 999999999999999999999999999987532110 1123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHH---HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~---~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
||||||++|+|++ ||...... ........ .. ........++++.+|+.+||+.||.+||| ++++++|
T Consensus 184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 9999999999996 77643221 11111111 10 11122345678999999999999999999 9999999
Q ss_pred cCCCCchHH
Q 001059 661 ALPPQMEYE 669 (1170)
Q Consensus 661 ~~~~~~~~~ 669 (1170)
+||.+..+.
T Consensus 262 ~~~~~~~~~ 270 (285)
T cd05630 262 PLFKQINFK 270 (285)
T ss_pred hhhhccCHH
Confidence 999886554
No 181
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.1e-35 Score=328.79 Aligned_cols=256 Identities=22% Similarity=0.402 Sum_probs=202.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|++.+.||+|+||.||+|.++.+++.||+|++..... ....+.+|+.+++.+ +||||++++++|.....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP----- 77 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC-----
Confidence 467888999999999999999999999999999875432 245688999999998 79999999998854210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 78 -----------------------------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH 128 (272)
T cd06637 78 -----------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128 (272)
T ss_pred -----------------------------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012357899999997 5899988753 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 586 (1170)
+++|+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+. ..+
T Consensus 129 ~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 193 (272)
T cd06637 129 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 193 (272)
T ss_pred HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc---------------ccCCcccccccccCHhHhccccCcCCCC
Confidence 9999999999999999999999999999987542111 012345789999999998631 347
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+.++|||||||++|||++ ||.............. ...........+.++.+||.+||+.||.+|||+.+++.||||
T Consensus 194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 889999999999999997 6654443333322222 111112223456789999999999999999999999999996
No 182
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4e-35 Score=331.58 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=204.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|+..+.||+|+||+||+|.+..+|+.||+|++....... .....+.+|+.+|+.++|+||+++++++.
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----------- 70 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE----------- 70 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----------
Confidence 778899999999999999999999999999987543222 22345788999999999999999988773
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 71 -----------------------------TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred -----------------------------cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999997 5888777543 3699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||++....... ......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~~~aPE~~~~-~~~~~~~Di 184 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------SIRGRVGTVGYMAPEVLNN-QRYTLSPDY 184 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----------------cccCCCCCcCccChHHhcC-CCCCcccch
Confidence 99999999999999999999999999987532110 1123479999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~ 663 (1170)
|||||++|+|++ ||....+............. .+......++++.+|+.+||+.||.+||+ +.+++.|+|+
T Consensus 185 ~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05632 185 WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264 (285)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence 999999999996 77654433221111111111 11222345678999999999999999999 8999999999
Q ss_pred CCchHHH
Q 001059 664 PQMEYEL 670 (1170)
Q Consensus 664 ~~~~~~~ 670 (1170)
......-
T Consensus 265 ~~~~~~~ 271 (285)
T cd05632 265 RNMNFKR 271 (285)
T ss_pred hcCCHHH
Confidence 9986553
No 183
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2.1e-35 Score=332.12 Aligned_cols=256 Identities=29% Similarity=0.443 Sum_probs=206.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..++..||+|.+... .......+.+|+.++++++||||+++++.+..
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--------- 73 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec---------
Confidence 5799999999999999999999989999999998753 33345678899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||+++ +|.+++... ..+++..++.++.|++.||.|||++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 74 -------------------------------ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred -------------------------------CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999975 888888664 4699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
||+||||||+||+++.++.++|+|||++....... .......||+.|+|||++.. ...++.
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 187 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL---------------QKRDTFIGTPYWMAPEVVACETFKDNPYDY 187 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCccchhhcccc---------------cccceeecchhhcCHHHHhhcccCCCCCCc
Confidence 99999999999999999999999999987542111 01234578999999998753 134678
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|+|++ ||..........................+.++.++|.+||+.+|.+||++.++++|+|+..
T Consensus 188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 9999999999999997 7765544444333332211111222345678999999999999999999999999999987
Q ss_pred ch
Q 001059 666 ME 667 (1170)
Q Consensus 666 ~~ 667 (1170)
..
T Consensus 268 ~~ 269 (280)
T cd06611 268 QS 269 (280)
T ss_pred cc
Confidence 63
No 184
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=3.5e-35 Score=330.86 Aligned_cols=256 Identities=27% Similarity=0.370 Sum_probs=205.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|++.+.||.|+||.||+|.+..++..+|+|.+... .......+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~---------- 73 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY---------- 73 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee----------
Confidence 367889999999999999999999999999998643 23345678899999999999999999988743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|++|||+++ +|..++.. ...+++..+..++.||+.||+|||+.|
T Consensus 74 ------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 74 ------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467999999975 77776654 456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCcc
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDEK 589 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~k 589 (1170)
++||||||+|||++.++.+||+|||++....... .......||+.|+|||++.. ...++.+
T Consensus 124 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 188 (282)
T cd06643 124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 188 (282)
T ss_pred eeecCCCcccEEEccCCCEEEccccccccccccc---------------cccccccccccccCHhhccccCCCCCCCCcc
Confidence 9999999999999999999999999987542110 01233568999999999842 2347789
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|||++ ||......+...................+.++.+||.+||+.||.+||++.++++|+|+...
T Consensus 189 ~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 189 ADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred chhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999999999996 77665555444444332222222233456789999999999999999999999999998765
Q ss_pred hH
Q 001059 667 EY 668 (1170)
Q Consensus 667 ~~ 668 (1170)
..
T Consensus 269 ~~ 270 (282)
T cd06643 269 SN 270 (282)
T ss_pred CC
Confidence 43
No 185
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.3e-35 Score=333.12 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||+|++|+||+|.++.+|+.||+|.+............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-------- 72 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--------
Confidence 368999999999999999999999999999999987554433344678899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..+.|+||||++++|.+.+..... +++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 120 (294)
T PLN00009 73 --------------------------------EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120 (294)
T ss_pred --------------------------------CCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999888765443 5788899999999999999999
Q ss_pred CCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 512 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+|++||||||+||+++. ++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 185 (294)
T PLN00009 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---------------RTFTHEVVTLWYRAPEILLGSRHYSTPV 185 (294)
T ss_pred CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc---------------cccccCceeecccCHHHHhCCCCCCcHH
Confidence 99999999999999985 4579999999997542110 0112346789999999987645578999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---------------------CC-----ccccCCHHHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---------------------PP-----SWVAKFSEQESLLR 641 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---------------------p~-----~~~~~~~e~~~LI~ 641 (1170)
|||||||++|+|++ ||................+.. ++ .....++++.+++.
T Consensus 186 Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (294)
T PLN00009 186 DIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLS 265 (294)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHH
Confidence 99999999999997 665444433333222111000 00 11234668899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+||+.+|.+||++.++++|+||...
T Consensus 266 ~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 266 KMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred HHccCChhhCcCHHHHhcCchHhHH
Confidence 9999999999999999999998765
No 186
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.1e-35 Score=332.23 Aligned_cols=257 Identities=27% Similarity=0.398 Sum_probs=205.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++++||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 80 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--------- 80 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe---------
Confidence 5689999999999999999999999999999998643 33456678899999999999999999988733
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||+++ +|..++.+ ...+++..++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 81 -------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3467999999975 67766654 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+ ...++.
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 194 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDY 194 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCccceeccccc---------------cccceecCCccccCceeeccccccCCCCCc
Confidence 99999999999999999999999999987532110 11234568899999999853 234688
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||..........................+.++.++|++||+.||++||+++++++|+|+..
T Consensus 195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred hhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 9999999999999997 6665544444333322222111223345678999999999999999999999999999876
Q ss_pred chH
Q 001059 666 MEY 668 (1170)
Q Consensus 666 ~~~ 668 (1170)
...
T Consensus 275 ~~~ 277 (292)
T cd06644 275 VTS 277 (292)
T ss_pred ccc
Confidence 643
No 187
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.8e-35 Score=333.21 Aligned_cols=254 Identities=27% Similarity=0.445 Sum_probs=201.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|.++.+|+.||+|.+..........+.+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR---------- 70 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc----------
Confidence 4789999999999999999999989999999998655444344567889999999999999999988762
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|++|||+++ .|..+......+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 71 ------------------------------RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred ------------------------------cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 24578999999986 55555555567999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.++|+|||++..+.... ...+...++..|+|||++.+...++.++|||
T Consensus 121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (286)
T cd07846 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIW 185 (286)
T ss_pred ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---------------cccCcccceeeccCcHHhccccccCchHhHH
Confidence 9999999999999999999999999987643211 0123356889999999987655678899999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCC---------CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP---------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p---------~~~~~~~~e~~~LI~~ 642 (1170)
||||++|||++ ||......+.......... ..+ ..+...+..+.+|+.+
T Consensus 186 slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07846 186 AVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQ 265 (286)
T ss_pred HHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHH
Confidence 99999999997 5543332221111110000 000 0123456688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 001059 643 LMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+.+|.+||++.++++|+||
T Consensus 266 ~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 266 CLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HhcCCcccchhHHHHhcCCCC
Confidence 999999999999999999997
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=8.4e-35 Score=322.37 Aligned_cols=250 Identities=33% Similarity=0.532 Sum_probs=209.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+.++.||.|+||.||.+++..+|+.+++|.+.....+......+.+|+.++++++||||++++++|.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---------- 70 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD---------- 70 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec----------
Confidence 4889999999999999999999999999999998766555666788999999999999999999998843
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++||||+ ++|.+++... ..+++..+..++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 71 ------------------------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred ------------------------------CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999997 5999988764 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------~~~~~~~~~~y~ape~~~~-~~~~~~~Dv 184 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---------------MAETVVGTPYYMSPELCQG-VKYNFKSDI 184 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc---------------cccccCCCccccCHhhcCC-CCCCCcchh
Confidence 999999999999999999999999999976432110 1234578999999999887 457899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||||+++|||++ ||......+....+.. +..++.....+.++.++|.+||..+|.+||++.++++|+|+
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999997 6665554444444332 33333335567789999999999999999999999999875
No 189
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.9e-35 Score=331.00 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||.|+||.||+|.++.+|+.||||.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 73 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIH--------- 73 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEe---------
Confidence 47899999999999999999999989999999998754322 22345678999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+.|+||||++++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~ 122 (291)
T cd07844 74 -------------------------------TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122 (291)
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 24578999999999999988754 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv 187 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS---------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDM 187 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccccccccCCCC---------------ccccccccccccCCcHHhhcCcccCcHHHH
Confidence 99999999999999999999999999987532111 011223578899999998764568899999
Q ss_pred HHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCC----------------------C-CC----ccccCC--HHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGE----------------------L-PP----SWVAKF--SEQESL 639 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~----------------------~-p~----~~~~~~--~e~~~L 639 (1170)
||+||++|+|++ ||.... ..+........... . +. ...... +++.++
T Consensus 188 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07844 188 WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEEL 267 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHH
Confidence 999999999996 664333 11111111100000 0 00 001122 677899
Q ss_pred HHHccCCCCCCCCCHHHHHhccCC
Q 001059 640 LRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|.+||+.+|.+|||+.++++|+||
T Consensus 268 i~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 268 ALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHhccCcccccCHHHHhcCCCC
Confidence 999999999999999999999997
No 190
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.4e-35 Score=323.34 Aligned_cols=250 Identities=31% Similarity=0.593 Sum_probs=207.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||++.+..+|+.||+|.+............+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----------- 69 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE----------- 69 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----------
Confidence 588999999999999999999999999999999765444445568899999999999999999998762
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....|++|||++ ++|.+.+.... .+++.+++.++.|++.||.|||++
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 70 -----------------------------ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred -----------------------------CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999996 58998887543 588999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++|+||+|+|||++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv 184 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---------------ELARTCIGTPYYLSPEICEN-RPYNNKSDI 184 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch---------------hhhhhccCCccccCHHHhCC-CCCCCccch
Confidence 99999999999999999999999999997643211 00122458899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||......+.....+. +..++.....++++.++|.+||+.+|.+||++.++++|+||
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 185 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred hHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999997 6665555544444432 33343444567789999999999999999999999999996
No 191
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.2e-35 Score=330.92 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=202.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.+.||.|++|.||+|.++.+|..||+|++............+.+|+.+++.++||||+++++++.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~------------ 68 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH------------ 68 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec------------
Confidence 67789999999999999999999999999999765444344467889999999999999999998773
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
.....|++|||++++|.+++.... .+++..++.++.||+.||+|||++++
T Consensus 69 ----------------------------~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~ 120 (283)
T cd07835 69 ----------------------------SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120 (283)
T ss_pred ----------------------------cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 235789999999989999887665 69999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||+|+||+++.++.++|+|||++....... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 185 (283)
T cd07835 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWS 185 (283)
T ss_pred eCCCCCHHHEEEcCCCcEEEeecccccccCCCc---------------cccCccccccCCCCCceeecCcccCcHHHHHH
Confidence 999999999999999999999999997542111 01123357899999998876445789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHccC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
|||++|+|++ ||................. .........++.+.++|.+||+
T Consensus 186 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (283)
T cd07835 186 IGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLV 265 (283)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhc
Confidence 9999999997 6654433322222111100 0001123445688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 001059 646 PSPSDRPSATELLQDALP 663 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~ 663 (1170)
.||.+|||+.++++|+||
T Consensus 266 ~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 266 YDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChhhCcCHHHHhcCCCC
Confidence 999999999999999997
No 192
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.4e-35 Score=325.39 Aligned_cols=255 Identities=31% Similarity=0.519 Sum_probs=205.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-------hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
|.+...||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 567789999999999999999899999999986543321 123568899999999999999999988733
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
..+.+++|||+++ +|.+++.....+++..+..++.|++.||+|
T Consensus 78 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~ 121 (267)
T cd06628 78 ------------------------------------ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY 121 (267)
T ss_pred ------------------------------------CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 3567899999975 899999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+||+++.++.+||+|||+++.+....... ..........|++.|+|||.+.+ ..++.
T Consensus 122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~y~~pe~~~~-~~~~~ 191 (267)
T cd06628 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLST---------KTNGARPSLQGSVFWMAPEVVKQ-TSYTR 191 (267)
T ss_pred HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccC---------CccccccccCCCcCccChhHhcc-CCCCc
Confidence 999999999999999999999999999999998664211000 00011223468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
++|+|||||++|+|++ ||.............. ...+......+..+.++|++||+.||.+||++.++++|+||
T Consensus 192 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 192 KADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999997 7765544333332221 22333334566789999999999999999999999999986
No 193
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.5e-35 Score=333.42 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=203.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|++.+.||.|+||.||+|.+..+|+.||||.++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH------- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------
Confidence 478899999999999999999989999999999765433 2344567789999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+||||++++|.+++.... .+++..++.++.||++||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~ 120 (298)
T cd07841 74 ---------------------------------KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120 (298)
T ss_pred ---------------------------------CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999889999998766 79999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+|+||||+|||++.++.+||+|||+++...... .......+++.|+|||.+.+...++.++|
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 185 (298)
T cd07841 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN---------------RKMTHQVVTRWYRAPELLFGARHYGVGVD 185 (298)
T ss_pred CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---------------ccccccccceeeeCHHHHhCCCCCCcHHH
Confidence 999999999999999999999999999998653211 01123357889999999876456789999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC--------------------CC-----CccccCCHHHHHHHHHc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~--------------------~p-----~~~~~~~~e~~~LI~~~ 643 (1170)
||||||++|||++ ||....+............. .+ ..+...+.++.++|.+|
T Consensus 186 v~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (298)
T cd07841 186 MWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRL 265 (298)
T ss_pred HHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHH
Confidence 9999999999997 34333322221111110000 00 01123456788999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||++|||+.++++|+||.+..
T Consensus 266 l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 266 LTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hcCCcccCcCHHHHhhCccccCCC
Confidence 999999999999999999998864
No 194
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.2e-35 Score=325.17 Aligned_cols=249 Identities=27% Similarity=0.470 Sum_probs=203.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..+++.||+|.++.... .+.+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------- 69 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFK--------- 69 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeec---------
Confidence 689999999999999999999998899999999864322 5689999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+++||+++ +|.+++.. ...+++..++.++.|++.||.|||+.
T Consensus 70 -------------------------------~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 70 -------------------------------NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred -------------------------------CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999974 89998865 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+++||||+|+||+++.++.+||+|||++........ ......|+..|+|||++.+ ..++.++||
T Consensus 119 ~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di 182 (256)
T cd06612 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---------------KRNTVIGTPFWMAPEVIQE-IGYNNKADI 182 (256)
T ss_pred CcccCCCCcceEEECCCCcEEEcccccchhcccCcc---------------ccccccCCccccCHHHHhc-CCCCchhhH
Confidence 999999999999999999999999999986532110 1123458899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||..........................+.++.++|.+||+.||.+|||+.++++|+|+
T Consensus 183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999997 66554443333222211111111222345689999999999999999999999999996
No 195
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=350.46 Aligned_cols=256 Identities=29% Similarity=0.517 Sum_probs=214.1
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CChhhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
+.+||+ +...+||+|+|-+||+|.+..+|..||.-.++..+ .+....++|..|+.+|+.|+|||||++|.+|.+.
T Consensus 37 p~gRy~---k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 37 PTGRYL---KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred CCCcee---ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 345553 34567999999999999999999999987766554 4455568999999999999999999999999653
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
....+.+|+|++. |+|..++.+.+.++...++.|++||++|
T Consensus 114 --------------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkG 155 (632)
T KOG0584|consen 114 --------------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKG 155 (632)
T ss_pred --------------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 2467889999995 8999999999999999999999999999
Q ss_pred HHHHHhCC--ccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQG--IIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~g--IiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|.|||++. |||||||-+||||+++ |.|||+|+|+|+...... ..+.+|||.|||||.+..
T Consensus 156 L~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----------------aksvIGTPEFMAPEmYEE 218 (632)
T KOG0584|consen 156 LVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----------------AKSVIGTPEFMAPEMYEE 218 (632)
T ss_pred hhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc-----------------cceeccCccccChHHHhh
Confidence 99999985 9999999999999876 899999999999864322 245799999999999985
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
.|+..+||||||++++||+| ||..-.......+.+. .|..|..+.. ..|++++||.+||.. .+.|||+.++|
T Consensus 219 --~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~-SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 219 --NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT-SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred --hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH-cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 69999999999999999998 7776544433333333 4445544433 357999999999999 99999999999
Q ss_pred hccCCCCc
Q 001059 659 QDALPPQM 666 (1170)
Q Consensus 659 ~~~~~~~~ 666 (1170)
+|+||...
T Consensus 295 ~d~Ff~~d 302 (632)
T KOG0584|consen 295 KDPFFDED 302 (632)
T ss_pred hChhhccc
Confidence 99998875
No 196
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.4e-35 Score=332.57 Aligned_cols=275 Identities=27% Similarity=0.379 Sum_probs=208.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++.+.+...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD---- 81 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc----
Confidence 3689999999999999999999999999999999987654433334467889999999999999999987754310
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
........+|++|+|+++++...+.. ...+++..++.++.||++||+|||+
T Consensus 82 ----------------------------~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 82 ----------------------------KSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred ----------------------------cccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00123457899999999988887765 3469999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++............ .........+...|++.|+|||++.+...++.++|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG----GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc----CCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence 99999999999999999999999999999865432211000 00001112345578999999998876556899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------------CCC----ccccCCHHHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LPP----SWVAKFSEQESLLR 641 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------------~p~----~~~~~~~e~~~LI~ 641 (1170)
||||||++|||++ ||................+. .++ .+....+.+.++|.
T Consensus 210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 289 (311)
T cd07866 210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLS 289 (311)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHH
Confidence 9999999999997 55544433322221111110 000 11233457889999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||+.||.+|||+.+++.|+||
T Consensus 290 ~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 290 KLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHcccCcccCcCHHHHhcCCCC
Confidence 9999999999999999999997
No 197
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.8e-35 Score=327.27 Aligned_cols=247 Identities=18% Similarity=0.248 Sum_probs=197.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||.||+|.++ ..+..||+|.++.. .+......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR------ 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec------
Confidence 57999999999999999999875 34678999998753 333445678999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||||+++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 78 ----------------------------------GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred ----------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467999999974 888888764 4689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.+|++|||.+....... ........+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--------------IYTTMSGKSPVLWAAPEAIQY-HHFSSA 188 (266)
T ss_pred HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc--------------hhcccCCCCceeecCHHHHhh-CCccch
Confidence 99999999999999999999999999999876431110 001112346778999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+|||||||++||+++ ||......+.... +. .+..++.....+..+.+++.+||+.+|.+||++.+|++
T Consensus 189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA-VE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999774 7765544433322 22 22233344556778999999999999999999999986
No 198
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.7e-35 Score=331.84 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=206.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++.+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------- 87 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--------- 87 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec---------
Confidence 579999999999999999999999999999999875433 235678899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||+++ +|..++.. ..+++.++..++.|++.||+|||++|
T Consensus 88 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 88 -------------------------------GDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred -------------------------------CceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3578999999975 78877754 46899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 199 (296)
T cd06655 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 199 (296)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccchhccccc---------------ccCCCcCCCccccCcchhcC-CCCCchhhHH
Confidence 9999999999999999999999999988643211 01123468999999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|+|++ ||..........................++.+.++|++||..||.+||++.++++|+|+...
T Consensus 200 slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 99999999997 77665544433332221211222334567789999999999999999999999999998754
No 199
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.4e-35 Score=347.03 Aligned_cols=251 Identities=24% Similarity=0.304 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|++ ..++..||||+++.... ....+.+.+|+.+|+.+ +||||++++++|.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 35799999999999999999975 34567899999864332 23456788999999999 89999999998733
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 488 (1170)
....|+|||||+ |+|.+++....
T Consensus 111 --------------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd05104 111 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYK 152 (375)
T ss_pred --------------------------------------CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHH
Confidence 345689999996 58888875421
Q ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 489 ---------------------------------------------------------HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 489 ---------------------------------------------------------~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.+++..++.++.||+.||+|||+
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 232 (375)
T cd05104 153 NLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS 232 (375)
T ss_pred hhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|
T Consensus 233 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD 298 (375)
T cd05104 233 KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-------------YVVKGNARLPVKWMAPESIFN-CVYTFESD 298 (375)
T ss_pred CCeeccCCchhhEEEECCCcEEEecCccceeccCccc-------------ccccCCCCCCcceeChhHhcC-CCCCCCCC
Confidence 9999999999999999999999999999986432110 000112345678999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||++|||++ ||............+. .+..+......++++.+||.+||+.||++|||+.++++.
T Consensus 299 i~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 299 VWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK-EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH-hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999985 6655433333333333 222222223346789999999999999999999999875
No 200
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.6e-35 Score=322.13 Aligned_cols=252 Identities=35% Similarity=0.619 Sum_probs=207.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|.+..+|+.||+|.++.........+++.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR--------- 71 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---------
Confidence 58899999999999999999999999999999987666656667889999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||
T Consensus 72 -----------------------------~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 72 -----------------------------SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred -----------------------------CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 2356799999997 589888865 356899999999999999999999
Q ss_pred -----hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 511 -----GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 511 -----s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
+.+++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~pE~~~~-~~ 186 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------SFAKTYVGTPYYMSPEQLNH-MS 186 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------ccccccccCCCccChhhhcC-CC
Confidence 9999999999999999999999999999998653211 00123468999999999987 55
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++|+||||+++|+|++ ||........... +. .+..+......++.+.+++.+||+.+|++||++.+|++|||
T Consensus 187 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASK-IK-EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHH-Hh-cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 8899999999999999997 7765543332222 22 33333333456678999999999999999999999999998
Q ss_pred C
Q 001059 663 P 663 (1170)
Q Consensus 663 ~ 663 (1170)
.
T Consensus 265 ~ 265 (265)
T cd08217 265 I 265 (265)
T ss_pred C
Confidence 4
No 201
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.7e-35 Score=339.10 Aligned_cols=265 Identities=25% Similarity=0.371 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+..+|+.||||+++.... ......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPS------ 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeeccc------
Confidence 4689999999999999999999999999999999864322 234567889999999999999999998763321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||++++|.+.+.. ..+++..++.++.||+.||+|||++|
T Consensus 77 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 77 -----------------------------FESFNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred -----------------------------ccccceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 012346799999999998887754 56999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++......... ........||+.|+|||++.+...++.++|||
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 194 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIW 194 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHH
Confidence 999999999999999999999999999864321100 00113357899999999876545689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhh----------------------h----cCCCC--CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLK----------------------Q----KGELP--PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~----------------------~----~~~~p--~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||.............. . ....+ ......++++.++|.+
T Consensus 195 slGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 274 (336)
T cd07849 195 SVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDK 274 (336)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHH
Confidence 99999999997 6643322111110000 0 00000 0112346688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++|+|+.+..
T Consensus 275 ~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 275 MLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HcCCChhhCcCHHHHhcCccccccC
Confidence 9999999999999999999998663
No 202
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.2e-36 Score=322.34 Aligned_cols=265 Identities=23% Similarity=0.403 Sum_probs=206.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..+..|+.+..||+|.||.||+|..+.++ +.||||+++-............||+.+++.++||||+.+..+|+++
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~- 99 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH- 99 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-
Confidence 35678999999999999999999765443 3799999976544445567789999999999999999998777432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CCCCHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQI 502 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qI 502 (1170)
...+++++||.+.+|+++++-. ..++...++.++.||
T Consensus 100 --------------------------------------d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQi 141 (438)
T KOG0666|consen 100 --------------------------------------DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQI 141 (438)
T ss_pred --------------------------------------CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHH
Confidence 4678999999999999988532 358999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
+.|+.|||++-|+||||||.|||+..+ |.|||+|||+|+.+..+-.. .......+-|.+|.|||
T Consensus 142 l~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp------------l~s~d~VVVTiWYRAPE 209 (438)
T KOG0666|consen 142 LDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP------------LASLDPVVVTIWYRAPE 209 (438)
T ss_pred HhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc------------cccCCceEEEEEecChH
Confidence 999999999999999999999999888 89999999999987644211 11223457899999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc--CCCchhHH----------HHHHHHhhhcCC-----------CCC--------
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMER----------QIVLSDLKQKGE-----------LPP-------- 627 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt--Pf~~~~~~----------~~~~~~l~~~~~-----------~p~-------- 627 (1170)
.+.|...|+++.||||+|||+.||++ |.....+. ..+.++..--+. +|.
T Consensus 210 LLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f 289 (438)
T KOG0666|consen 210 LLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDF 289 (438)
T ss_pred HhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHh
Confidence 99998889999999999999999986 43211110 001111100000 000
Q ss_pred ---------------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 628 ---------------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 628 ---------------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+...++.+.+|+.+||+.||.+|.|++++|+|++|..++
T Consensus 290 ~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 290 RRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 0111334577999999999999999999999999988764
No 203
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-35 Score=330.93 Aligned_cols=253 Identities=22% Similarity=0.387 Sum_probs=205.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.+..+++.||+|.+...... ..+.+.+|+.+++.+.||||+++++.|..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--------- 88 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--------- 88 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEe---------
Confidence 6899999999999999999999999999999998754432 34678899999999999999999988743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|+||||++ ++|.+++.. ..+++.++..++.|++.||+|||++|
T Consensus 89 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 89 -------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred -------------------------------CCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999997 589888754 46899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 200 (296)
T cd06654 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 200 (296)
T ss_pred cccCCCCHHHEEEcCCCCEEECccccchhccccc---------------cccCcccCCccccCHHHHcC-CCCCccchHH
Confidence 9999999999999999999999999988643211 01123468999999999887 5678999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|+|++ ||....................+.....++.+.++|.+||..||.+|||+.++++|+|+...
T Consensus 201 s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 99999999997 77655443333222221111112233456789999999999999999999999999998653
No 204
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.4e-35 Score=329.82 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=201.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+++|++.+.||+|+||.||+|.+...+ ..||+|.++.. ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--- 79 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--- 79 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC---
Confidence 468999999999999999999987555 68999998643 333445678999999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
....|++|||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 122 (283)
T cd05048 80 -------------------------------------EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122 (283)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCC
Confidence 345789999996 5999988654 4578
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05048 123 CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADY-------------YRVQSKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccc-------------ccccCCCccc
Confidence 889999999999999999999999999999999999999999999999975422110 0112334678
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|+|||.+.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++++.+|+++||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 190 VRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IR-SRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred ccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCcCCCcccCCHHHHHHHHHHccCC
Confidence 89999999876 568999999999999999986 7766555443332 22 33344444567789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999975
No 205
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.2e-34 Score=328.15 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=198.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+...... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--------- 74 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--------- 74 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec---------
Confidence 6899999999999999999999999999999998754322 223457789999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|++|||++++|.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 75 -------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 75 -------------------------------KETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred -------------------------------CCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356899999999888877654 346888899999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 124 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 188 (291)
T cd07870 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188 (291)
T ss_pred cccCCCChHHEEEcCCCcEEEeccccccccCCCC---------------CCCCCccccccccCCceeecCCCCCcHHHHH
Confidence 9999999999999999999999999997532111 0112346789999999987645578899999
Q ss_pred HHHHHHHHhhc---CCCchhHHHH-HHHHhhhcC--------------C---------CCCc------cccCCHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQI-VLSDLKQKG--------------E---------LPPS------WVAKFSEQESLL 640 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~-~~~~l~~~~--------------~---------~p~~------~~~~~~e~~~LI 640 (1170)
||||++|+|++ ||........ ........+ . .+.. .....+++.+++
T Consensus 189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 268 (291)
T cd07870 189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA 268 (291)
T ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence 99999999997 6754433211 111110000 0 0000 011245788999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 001059 641 RRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.+||..||.+|||+.+++.|+||
T Consensus 269 ~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 269 SQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHhCcCcccCcCHHHHhcCCCC
Confidence 99999999999999999999997
No 206
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.6e-36 Score=339.08 Aligned_cols=256 Identities=27% Similarity=0.450 Sum_probs=206.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
-..|+++++||+||.++||++... +.+.||+|++.....+.....-+.+|+..|.+| .|.+||++|++=+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-------- 430 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-------- 430 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------
Confidence 357999999999999999999886 567788888776666667778899999999999 5999999998731
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-~~~~~i~~qI~~gL~yLHs 511 (1170)
...++||||||-+.+|..+|.+.....+ -..+.|..|++.|+.++|.
T Consensus 431 --------------------------------~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 431 --------------------------------TDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred --------------------------------cCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2578999999999999999998776433 4788899999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-------
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------- 584 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------- 584 (1170)
+||||-||||.|+|+- .|.+||+|||+|..+..+ +.++...+.+||+.|||||++....
T Consensus 479 ~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D-------------TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~ 544 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD-------------TTSIVKDSQVGTVNYMSPEALTDMSSSRENGK 544 (677)
T ss_pred hceeecCCCcccEEEE-eeeEEeeeechhcccCcc-------------ccceeeccccCcccccCHHHHhhccccccCCC
Confidence 9999999999999985 589999999999876432 2344456789999999999985421
Q ss_pred ---CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC---CCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 585 ---KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG---ELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 585 ---~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~---~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
+.+.++||||||||||+|++ ||.........+..+.... .+|..... .++.++++.||..||++|||+.
T Consensus 545 ~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 545 SKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred cceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcH
Confidence 25689999999999999995 8876655444443333221 22222211 2489999999999999999999
Q ss_pred HHHhccCCCCc
Q 001059 656 ELLQDALPPQM 666 (1170)
Q Consensus 656 eiL~~~~~~~~ 666 (1170)
++|+|||....
T Consensus 623 eLLqhpFl~~~ 633 (677)
T KOG0596|consen 623 ELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccccc
Confidence 99999987764
No 207
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8e-35 Score=327.02 Aligned_cols=251 Identities=26% Similarity=0.424 Sum_probs=196.9
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|++.+.||+|+||.||+|.+..+++.||+|+++....+.. .....+|+.+++++. ||||+++++++.+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--------- 70 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR--------- 70 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC---------
Confidence 6788999999999999999999999999999875433322 234567999999885 99999999887431
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....+++||||++++|.+.+... ..+++..++.++.||+.||+|||++|+
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 71 -----------------------------KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred -----------------------------CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 12467999999999998888754 568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++. +.+||+|||+++.+.... ..+...+++.|+|||++.+...++.++||||
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 184 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKP----------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCC----------------CcCCCCCCcccCChhHhhcCCCCCcchhHHH
Confidence 99999999999999 999999999998653111 1123468899999998765456789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcC------------------CCCC--------ccccCCHHHHHHHHHccC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKG------------------ELPP--------SWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~------------------~~p~--------~~~~~~~e~~~LI~~~L~ 645 (1170)
|||++|||++ ||......+.........+ ..+. .....+.++.++|++||+
T Consensus 185 lGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (282)
T cd07831 185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA 264 (282)
T ss_pred HHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhc
Confidence 9999999996 6654433222221111000 0111 112346789999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 001059 646 PSPSDRPSATELLQDALP 663 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~ 663 (1170)
++|.+||++.++++|+||
T Consensus 265 ~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 265 YDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccCHHHHhhCCCC
Confidence 999999999999999996
No 208
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.3e-35 Score=345.63 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=195.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|++..+| ..||||+++.... ......+.+|+.+++.+ +|||||+++++|.+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 468999999999999999999975444 5799999975432 23456788999999999 89999999998733
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 487 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 487 (1170)
...+|++||||+ |+|.+++...
T Consensus 114 --------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
T cd05106 114 --------------------------------------GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSS 155 (374)
T ss_pred --------------------------------------CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccc
Confidence 345789999996 5888877532
Q ss_pred ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 488 ---------------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 488 ---------------------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
.++++..+++++.||+.||+|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiH 235 (374)
T cd05106 156 DYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIH 235 (374)
T ss_pred cccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 23778889999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++++||+|||+++....... ........+++.|||||++.+ ..++.++||||||
T Consensus 236 rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG 301 (374)
T cd05106 236 RDVAARNVLLTDGRVAKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYG 301 (374)
T ss_pred ccCchheEEEeCCCeEEEeeceeeeeccCCcc-------------eeeccCCCCccceeCHHHhcC-CCCCccccHHHHH
Confidence 99999999999999999999999975422110 001112245678999999876 5689999999999
Q ss_pred HHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 597 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 597 viL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++|||++ ||.............. .+..+......++++.++|.+||+.||.+|||+.++++.
T Consensus 302 vil~ellt~G~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 302 ILLWEIFSLGKSPYPGILVNSKFYKMVK-RGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHHHHhCCCCCCccccccHHHHHHHH-cccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999984 7765444333333332 222222223346799999999999999999999999864
No 209
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7.9e-35 Score=327.68 Aligned_cols=252 Identities=25% Similarity=0.438 Sum_probs=201.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|++|.||+|+++.+|..||||+++..... .....+.+|+.+++.++||||++++++|.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 69 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHT---------- 69 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEee----------
Confidence 589999999999999999999999999999999754332 234567789999999999999999988743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++++|.+++... ..+++..+..++.||+.||+|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (284)
T cd07836 70 ------------------------------ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119 (284)
T ss_pred ------------------------------CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999998887654 3589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||++++++.+||+|||++....... .......+|+.|+|||++.+...++.++||
T Consensus 120 ~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 184 (284)
T cd07836 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184 (284)
T ss_pred CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---------------cccccccccccccChHHhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 011234678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc------------------CCCCC--------ccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~------------------~~~p~--------~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|+|++ ||......+......... ...|. .....++.+.++|.+|
T Consensus 185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 264 (284)
T cd07836 185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRL 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHH
Confidence 999999999997 665444333222221110 00010 0123456788999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+||++.++++||||
T Consensus 265 l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 265 LQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
No 210
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.3e-34 Score=320.33 Aligned_cols=249 Identities=31% Similarity=0.553 Sum_probs=205.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+..+.||+|+||.||+|.+..+++.+|||.+............+.+|+.+|+.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE---------- 70 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec----------
Confidence 5889999999999999999999999999999998665555556789999999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+++||||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 71 ------------------------------DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999975 899998764 3489999999999999999999999
Q ss_pred CccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
|++||||||+||+++.+ +.+||+|||++....... ......|++.|+|||.+.+ ..++.++|
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------KAYTVVGTPCYISPELCEG-KPYNQKSD 183 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc----------------cccccccCCcccCchhccC-CCCCcccc
Confidence 99999999999999865 468999999998653211 1122468899999999987 56889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||+++|+|++ ||.............. ...++.....++++.+++.+||+.+|.+|||+.++++|||+
T Consensus 184 v~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 184 IWALGCVLYELASLKRAFEAANLPALVLKIMS--GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred hHHHHHHHHHHHhCCCCcccCchHHHHHHHHh--cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999999997 7765554444433332 22222233467789999999999999999999999999985
No 211
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.9e-35 Score=326.88 Aligned_cols=254 Identities=28% Similarity=0.460 Sum_probs=208.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..+|+.||+|.+.... +......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--------- 70 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE---------
Confidence 46888999999999999999999999999999987543 23345678899999999999999999988743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+++||++ ++|.+++... .+++..++.++.||+.||.|||+++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 71 -------------------------------GSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred -------------------------------CCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 357899999997 4898888765 7999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.++|+|||+++...... .......|++.|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~ 182 (274)
T cd06609 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---------------SKRNTFVGTPFWMAPEVIKQ-SGYDEKADIW 182 (274)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccceeecccc---------------cccccccCCccccChhhhcc-CCCCchhhHH
Confidence 9999999999999999999999999998653221 01233578899999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
||||++|+|++ ||.............. ...+..... .++++.+++.+||..+|++|||+.++++|+|+.....
T Consensus 183 slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 183 SLGITAIELAKGEPPLSDLHPMRVLFLIPK--NNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHHHHHHHHHhCCCCcccCchHHHHHHhhh--cCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 99999999997 6655444333322222 122221112 5678999999999999999999999999999988754
No 212
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-34 Score=326.77 Aligned_cols=257 Identities=24% Similarity=0.425 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+ +||||++++++|....
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~----- 88 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD----- 88 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc-----
Confidence 478999999999999999999999999999999876422 2235678899999999 6999999999875321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
.....++|++|||++ ++|.+++.. ...+++..++.++.|++.||.
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 89 ------------------------------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 013457899999997 588887642 346889999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---- 583 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 583 (1170)
|||+++++||||||+||+++.++.+||+|||+++...... .......|++.|+|||++...
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQLD 203 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC---------------CccccccCCCcccChhhhchhhhcc
Confidence 9999999999999999999999999999999987643211 011234689999999987531
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..++.++|||||||++|||++ ||..........................+.++.++|.+||+.||++|||+.++++|
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 347889999999999999997 66655443333222111111111112245689999999999999999999999999
Q ss_pred cCC
Q 001059 661 ALP 663 (1170)
Q Consensus 661 ~~~ 663 (1170)
+|+
T Consensus 284 ~~~ 286 (286)
T cd06638 284 VFI 286 (286)
T ss_pred ccC
Confidence 986
No 213
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.1e-34 Score=323.86 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=204.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.++.+++.|++|++..... ....+.+|+.+++++ +||||++++++|.....
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP----- 77 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC-----
Confidence 689999999999999999999998999999999875432 346788999999999 79999999999855310
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|++|||+++ +|.+++.. ...+++..++.++.|++.||.|
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 78 -----------------------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred -----------------------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0134678999999975 88888764 3469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----C
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----P 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~ 584 (1170)
||++|++|+||+|+||+++.++.+||+|||++....... .......|++.|+|||++... .
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------GRRNTFIGTPYWMAPEVIACDEQPDA 193 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch---------------hhhcCccccccccCHhHhcccccccC
Confidence 999999999999999999999999999999987543211 011334689999999987542 3
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++.++|||||||++|+|++ ||..........................++++++||.+||..||.+|||+.++++||
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 47789999999999999997 776554444443333221111111223556899999999999999999999999999
Q ss_pred CC
Q 001059 662 LP 663 (1170)
Q Consensus 662 ~~ 663 (1170)
|.
T Consensus 274 ~~ 275 (275)
T cd06608 274 FI 275 (275)
T ss_pred CC
Confidence 85
No 214
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.3e-36 Score=357.42 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=207.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..+.+..+.||+|+||+||+|+... +...||||.++.. .+....++|.||+++|..|+|||||+++|.|.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCRE--- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc---
Confidence 3567788999999999999999752 3457999998743 344467899999999999999999999999943
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------C----CCHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------H----FDKE 493 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~----l~e~ 493 (1170)
...+|+|+|||. |+|.++|.... . ++..
T Consensus 561 -------------------------------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~ 603 (774)
T KOG1026|consen 561 -------------------------------------GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTS 603 (774)
T ss_pred -------------------------------------CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHH
Confidence 456899999996 89999996431 2 7888
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
+.+.++.|||.||.||-++.+|||||-.+|+||.++..|||+|||+++.+...++.+. .....-..+
T Consensus 604 q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~-------------~~~t~lPIR 670 (774)
T KOG1026|consen 604 QFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKV-------------RGNTLLPIR 670 (774)
T ss_pred HHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcc-------------cCCceeeee
Confidence 9999999999999999999999999999999999999999999999997654433221 011234568
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|||||.+.. ++|+.+||||||||+|||+++ |+.+..+.+....+. .+...+.+.++++++.+||..||+.+|.
T Consensus 671 WMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~--~g~lL~~Pe~CP~~vY~LM~~CW~~~P~ 747 (774)
T KOG1026|consen 671 WMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR--AGQLLSCPENCPTEVYSLMLECWNENPK 747 (774)
T ss_pred cCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--cCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence 999999886 689999999999999999997 999888877765554 3444556678889999999999999999
Q ss_pred CCCCHHHHHh
Q 001059 650 DRPSATELLQ 659 (1170)
Q Consensus 650 ~RPta~eiL~ 659 (1170)
+||++++|-.
T Consensus 748 ~RPsF~eI~~ 757 (774)
T KOG1026|consen 748 RRPSFKEIHS 757 (774)
T ss_pred cCCCHHHHHH
Confidence 9999999843
No 215
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=7.2e-35 Score=328.43 Aligned_cols=255 Identities=29% Similarity=0.451 Sum_probs=202.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.++.+++.||+|+++...........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 71 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--------- 71 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE---------
Confidence 46899999999999999999999999999999987655444455788999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV-FESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~-l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||+++++.+. ......+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 72 -------------------------------KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999998765554 445566999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.+||+|||++........ .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~ 186 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVW 186 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--------------ccccCcccccCCcCCchhcCCCCcCchhhHH
Confidence 99999999999999999999999999986532210 0113357889999999998854789999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CCC---------cc-ccCCHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP---------SW-VAKFSEQESLLR 641 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~---------~~-~~~~~e~~~LI~ 641 (1170)
|||+++|+|++ ||................+. .++ .. ...++++.+||+
T Consensus 187 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (288)
T cd07833 187 AIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLK 266 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHH
Confidence 99999999997 55443332222111110000 000 00 112568899999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||..+|++|||+.++++|+||
T Consensus 267 ~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 267 ACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHhccCchhcccHHHHhcCCCC
Confidence 9999999999999999999997
No 216
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.6e-35 Score=329.69 Aligned_cols=255 Identities=23% Similarity=0.418 Sum_probs=203.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||.||+|.+..+|+.||+|.++... .......+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--------- 70 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec---------
Confidence 47899999999999999999999999999999987542 33345678999999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||||++ +|..++... ..+++..+..++.||+.||.|||
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 119 (286)
T cd06622 71 -------------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK 119 (286)
T ss_pred -------------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975 888777653 36999999999999999999999
Q ss_pred h-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-----
Q 001059 511 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----- 584 (1170)
Q Consensus 511 s-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----- 584 (1170)
+ .||+||||||+||+++.++.+||+|||++..+... ......|++.|+|||.+.+..
T Consensus 120 ~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 182 (286)
T cd06622 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-----------------LAKTNIGCQSYMAPERIKSGGPNQNP 182 (286)
T ss_pred hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-----------------ccccCCCccCccCcchhcCCCCCccC
Confidence 7 59999999999999999999999999998754211 112346888999999986522
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|+|++ ||.............. .....+......++++.+||.+||+.+|.+||++.++++|
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 35789999999999999997 7754333222211111 1222333334467899999999999999999999999999
Q ss_pred cCCCCch
Q 001059 661 ALPPQME 667 (1170)
Q Consensus 661 ~~~~~~~ 667 (1170)
+|+....
T Consensus 263 ~~~~~~~ 269 (286)
T cd06622 263 PWLVKYK 269 (286)
T ss_pred hhhhhcc
Confidence 9976653
No 217
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=5.7e-35 Score=325.15 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|+..+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--------- 70 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec---------
Confidence 468889999999999999999999999999999875433 2455678999999999999999999987732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG- 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs- 511 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 71 -------------------------------NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 357899999998 6999998876 779999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
.|++|+||||+||+++.++.++|+|||.+....... .....++..|+|||.+.+ ..++.++|
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-----------------~~~~~~~~~y~~PE~~~~-~~~~~~~D 181 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-----------------AKTFVGTSSYMAPERIQG-NDYSVKSD 181 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------hhcccCChhccCHHHHcC-CCCCchhh
Confidence 999999999999999999999999999987653221 011568899999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||+++|+|++ ||.... .......... ....+..... .++++.++|.+||..||.+|||+.+++.||||
T Consensus 182 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 9999999999997 665431 1111111111 1122222222 56789999999999999999999999999999
Q ss_pred CCch
Q 001059 664 PQME 667 (1170)
Q Consensus 664 ~~~~ 667 (1170)
.+.+
T Consensus 261 ~~~~ 264 (265)
T cd06605 261 KKYE 264 (265)
T ss_pred hccc
Confidence 7653
No 218
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-35 Score=331.10 Aligned_cols=255 Identities=22% Similarity=0.381 Sum_probs=205.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++++.||.|+||.||+|.+..+|+.||+|.+...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 87 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV-------- 87 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 37899999999999999999999999999999998754332 34668899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.+ ..+++.++..++.|++.||.|||+.
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~ 134 (297)
T cd06656 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN 134 (297)
T ss_pred --------------------------------CCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 588887754 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+|||++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 198 (297)
T cd06656 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (297)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCccceEccCCc---------------cCcCcccCCccccCHHHHcC-CCCCcHHHH
Confidence 99999999999999999999999999987542211 01123468999999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||++|+|++ ||..........................++.+.+||.+||..||.+||++.++++|+|+....
T Consensus 199 ~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 999999999997 776544332222222111111122334566889999999999999999999999999987653
No 219
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.1e-34 Score=332.93 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=197.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..+|++.+.||+|+||+||+|.+..+|.. ||+|+++.. ......+++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC----
Confidence 36899999999999999999998766664 899988633 233455678999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++++||++ |+|.+.+... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (316)
T cd05108 81 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123 (316)
T ss_pred -------------------------------------CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 23478999996 6899988764 45889999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++
T Consensus 124 ~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~apE~~~~-~~~~ 189 (316)
T cd05108 124 YLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-------------EYHAEGGKVPIKWMALESILH-RIYT 189 (316)
T ss_pred HHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc-------------ceeccCCccceeecChHHhcc-CCCC
Confidence 99999999999999999999999999999999986532210 011122345778999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+. ..... ....++....++.++.+++.+||..||.+||++.+++.+
T Consensus 190 ~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHh-CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999875 6654433332 22222 333333344566789999999999999999999999975
No 220
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=8.4e-35 Score=337.24 Aligned_cols=263 Identities=25% Similarity=0.337 Sum_probs=206.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||+||+|++..+|+.||||.+............+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~------ 77 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH------ 77 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc------
Confidence 35799999999999999999999999999999998754433334556789999999999999999998763220
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||++++|.+++.....+++..++.++.||+.||.|||+++
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 78 -----------------------------REAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred -----------------------------ccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 011245799999999999999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+|||++.++.+||+|||+++...... .......++..|+|||.+.....++.++|||
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw 193 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVW 193 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------ccccccccccCccChHHHhcCCCCCCcccHH
Confidence 9999999999999999999999999998643211 0113346889999999887544588999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHh-----------------------hhcCC-----CCCccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDL-----------------------KQKGE-----LPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l-----------------------~~~~~-----~p~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||...........+. ..... ........++++.++|++
T Consensus 194 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 273 (337)
T cd07858 194 SVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEK 273 (337)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHH
Confidence 99999999996 564322111110000 00000 001123466788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.+|.+|||+.++++|+|+...
T Consensus 274 ~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 274 MLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhcCChhhccCHHHHHcCcchhhh
Confidence 999999999999999999998754
No 221
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-36 Score=317.89 Aligned_cols=257 Identities=27% Similarity=0.393 Sum_probs=209.3
Q ss_pred ccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
-...+||.+. ++||-|-.|+|..|.++.||+.+|+|++.. ..+..||++..-.. .|||||.++++|...
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs-- 127 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENS-- 127 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhh--
Confidence 3346778774 579999999999999999999999998852 34577888876555 699999999887321
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEG 505 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~g 505 (1170)
.....++.||||.+. |.|...++.++. |++.++..|+.||..|
T Consensus 128 ----------------------------------~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~A 173 (400)
T KOG0604|consen 128 ----------------------------------YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLA 173 (400)
T ss_pred ----------------------------------ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHH
Confidence 123578999999996 589999987765 9999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.|||+.+|.||||||+|+|... +..+||+|||+|+.-..+ ....+.|.||+|.|||++..
T Consensus 174 v~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~----------------~~L~TPc~TPyYvaPevlg~ 237 (400)
T KOG0604|consen 174 VRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP----------------GDLMTPCFTPYYVAPEVLGP 237 (400)
T ss_pred HHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC----------------ccccCCcccccccCHHHhCc
Confidence 99999999999999999999975 456999999999864211 12356689999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHH----HHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~----~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
..|+..+|+||+||++|-|++ ||+..... ....++......+| +.|..++..++++|+.+|..+|.+|.|+
T Consensus 238 -eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI 316 (400)
T KOG0604|consen 238 -EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTI 316 (400)
T ss_pred -hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeH
Confidence 579999999999999999997 66533221 11223333444555 5888899999999999999999999999
Q ss_pred HHHHhccCCCCch
Q 001059 655 TELLQDALPPQME 667 (1170)
Q Consensus 655 ~eiL~~~~~~~~~ 667 (1170)
.+++.|||..+..
T Consensus 317 ~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 317 EEVMDHPWINQYE 329 (400)
T ss_pred HHhhcCchhcccc
Confidence 9999999987764
No 222
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=335.77 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=208.9
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
++||+|.||+||-|.++.+|+.||||+|.+-.-......++.+|+.+|.+++||.||.+-..|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~----------------- 632 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF----------------- 632 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----------------
Confidence 689999999999999999999999999976554444557899999999999999999987655
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
+....+|+|||-+.|++...+- +.+++++.....++.||+.||.|||-+||+|.|
T Consensus 633 -----------------------ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD 689 (888)
T KOG4236|consen 633 -----------------------ETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD 689 (888)
T ss_pred -----------------------cCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence 2357899999999998777653 456799999999999999999999999999999
Q ss_pred CCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 519 LTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 519 LKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
|||+|||+.+. ..+||||||+|+++.... ...+.+|||+|+|||+++. ..|+..-||||+
T Consensus 690 LKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------FRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSV 752 (888)
T KOG4236|consen 690 LKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------FRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSV 752 (888)
T ss_pred CCchheeeccCCCCCceeeccccceeecchhh----------------hhhhhcCCccccCHHHHhh-ccccccccceee
Confidence 99999999754 469999999999875433 1356799999999999998 569999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||+|--++ ||....+-.. ++......+| ..|..+++++.+||..+|+..-.+|.|.+..|.|+|.+...
T Consensus 753 GVIiYVsLSGTFPFNEdEdInd--QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 753 GVIIYVSLSGTFPFNEDEDIND--QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred eEEEEEEecccccCCCccchhH--HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 999998886 7754433222 2222334444 47899999999999999999999999999999999998874
No 223
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-34 Score=321.37 Aligned_cols=249 Identities=25% Similarity=0.469 Sum_probs=199.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|+++.+|+.||||.++... ........+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 73 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-------- 73 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--------
Confidence 68999999999999999999999999999999887533 233445678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08228 74 --------------------------------DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 346799999997 588887753 3448999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~~ 185 (267)
T cd08228 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh---------------HHHhcCCCCccccChhhhcc-CCCCc
Confidence 999999999999999999999999999999988653211 01123468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++||||||+++|||++ ||..... .......+. ....++. ....+..+.++|.+||+.+|++||++.++++.
T Consensus 186 ~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred hhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 9999999999999997 6654322 122222222 2223332 23455689999999999999999999999975
No 224
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.4e-34 Score=318.49 Aligned_cols=257 Identities=33% Similarity=0.498 Sum_probs=206.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|...+.||+|+||.||+|.+..+++.||+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----------- 69 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV----------- 69 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----------
Confidence 478899999999999999999989999999999876655456778999999999999999999998752
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....+++++||++ ++|.+++.....+++..++.++.|++.||+|||++|+
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 70 -----------------------------HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred -----------------------------cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 2456899999997 5899999887779999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CCCccchh
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 592 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDI 592 (1170)
+|+||||+||+++.++.+||+|||++.......... ........+++.|+|||++.+.. .++.++||
T Consensus 121 ~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv 189 (264)
T cd06626 121 VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189 (264)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------cccccCCcCCcCccChhhccCCCCCCCCcccch
Confidence 999999999999999999999999998754322100 00012346889999999988632 27899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhh-cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~-~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||||+++|+|++ ||............+.. .....+.....++.+.++|.+||+.+|.+|||+.++++|+|+
T Consensus 190 ~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 190 WSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999996 77654332222222221 111122333447789999999999999999999999999985
No 225
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=312.20 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=209.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++.+.+..||.|+.|.||+++++.+|..+|||.+.... ..+...+++..+.++...+ .|+||+++|+|+.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~------- 162 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT------- 162 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-------
Confidence 467888899999999999999999999999999998544 4456778888888877664 8999999999954
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++|.||.|..-+..++.+ .++++|..+-++...++.||.||..
T Consensus 163 ---------------------------------n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe 209 (391)
T KOG0983|consen 163 ---------------------------------NTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE 209 (391)
T ss_pred ---------------------------------CchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence 234678999998777776654 4579999999999999999999986
Q ss_pred -CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCc
Q 001059 512 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 588 (1170)
Q Consensus 512 -~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ 588 (1170)
+||||||+||+|||+|..|++||||||++-++... ..++...|-+.|||||.+.- .+.|+.
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS----------------kAhtrsAGC~~YMaPERidp~~~~kYDi 273 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----------------KAHTRSAGCAAYMAPERIDPPDKPKYDI 273 (391)
T ss_pred hcceeecccCccceEEccCCCEEeecccccceeecc----------------cccccccCCccccCccccCCCCCCccch
Confidence 57999999999999999999999999999876432 12455679999999998864 356999
Q ss_pred cchhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||+++||.| ||.... +-+..-.++...+...+.....++.+++|+..||.+|+.+||...++|+|+|..
T Consensus 274 RaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 274 RADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred hhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 9999999999999997 776643 333444444433333333344789999999999999999999999999999977
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
..+
T Consensus 354 ~ye 356 (391)
T KOG0983|consen 354 RYE 356 (391)
T ss_pred ecc
Confidence 664
No 226
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.1e-34 Score=324.40 Aligned_cols=256 Identities=21% Similarity=0.390 Sum_probs=201.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++++ +||||++++++|....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~------ 86 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS------ 86 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc------
Confidence 57889999999999999999999999999999986432 2345688899999998 7999999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.......+|++||||++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 87 ----------------------------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 87 ----------------------------PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred ----------------------------ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00124678999999974 898888653 35888999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~ 586 (1170)
++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||++.. ...+
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~ 203 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 203 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc---------------cCCCcccccccccCHhhcCcccCcCcCC
Confidence 9999999999999999999999999999987542111 01133578999999998753 2357
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+.++|||||||++|||++ ||....+......... ...........++++.+||.+||+.||.+|||+.++++|+|+
T Consensus 204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 889999999999999997 7755443333222211 111112223456789999999999999999999999999996
No 227
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.3e-34 Score=318.48 Aligned_cols=251 Identities=30% Similarity=0.452 Sum_probs=205.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|+..+.||+|+||+||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE------- 73 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-------
Confidence 36677899999999999999998999999999876442 23345678999999999999999999987632
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 120 (258)
T cd06632 74 ---------------------------------EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD 120 (258)
T ss_pred ---------------------------------CCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 899999887789999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++|+||||+||+++.++.+||+|||++....... ......|++.|+|||.+.....++.++|
T Consensus 121 ~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D 184 (258)
T cd06632 121 RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----------------FAKSFKGSPYWMAPEVIAQQGGYGLAAD 184 (258)
T ss_pred CCcccCCCCHHHEEECCCCCEEEccCccceeccccc----------------cccccCCCcceeCHHHhcCCCCCCchhh
Confidence 999999999999999999999999999987643211 1133568999999999876333889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|||||++|+|++ ||.............. ....+......++.+.+++++||+.+|.+||++.++++|||+
T Consensus 185 ~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 185 IWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred hHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 9999999999997 7765544333333222 123333344566789999999999999999999999999985
No 228
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4e-34 Score=323.74 Aligned_cols=258 Identities=26% Similarity=0.417 Sum_probs=202.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|.++.+|+.+|+|.+.... .....+.+|+.+++++ +||||++++++|....
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~----- 92 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD----- 92 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc-----
Confidence 478999999999999999999999999999999986432 2345678899999999 8999999999885421
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
......+|++|||++ ++|.+++.. ...+++..++.++.|++.||+
T Consensus 93 ------------------------------~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 142 (291)
T cd06639 93 ------------------------------KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142 (291)
T ss_pred ------------------------------ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 012346899999996 588887752 356899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--- 584 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--- 584 (1170)
|||++|++||||||+||+++.++.+||+|||++........ ......|++.|+|||++....
T Consensus 143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~ 207 (291)
T cd06639 143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------RRNTSVGTPFWMAPEVIACEQQYD 207 (291)
T ss_pred HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc---------------cccCccCCccccChhhhcCCCCcc
Confidence 99999999999999999999999999999999986532110 112346889999999986522
Q ss_pred -CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 -~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|||++ ||.............................+.+||.+||+.+|.+||++.++++|
T Consensus 208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 26889999999999999997 66654443333332221111111222345689999999999999999999999999
Q ss_pred cCCC
Q 001059 661 ALPP 664 (1170)
Q Consensus 661 ~~~~ 664 (1170)
||+.
T Consensus 288 ~~~~ 291 (291)
T cd06639 288 PFIK 291 (291)
T ss_pred cccC
Confidence 9984
No 229
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.7e-34 Score=318.40 Aligned_cols=247 Identities=30% Similarity=0.550 Sum_probs=201.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||++.++.+++.||+|.++.... ....+.+.+|+.+++.++||||++++++|..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 69 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA---------- 69 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 58899999999999999999999999999999875432 3345678899999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 70 ------------------------------DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred ------------------------------CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 457899999997 589888764 34589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+|+||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv 183 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------AYACTYVGTPYYVPPEIWEN-MPYNNKSDI 183 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------cccccccCCccccCHHHHcc-CCcCchhhh
Confidence 99999999999999999999999999987543211 01123568999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
||||+++|+|++ ||............. .+..++.....+..+.++|.+||+.||.+|||+.+++...
T Consensus 184 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 184 WSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred hhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 999999999996 776555444433332 2333333334567899999999999999999999998753
No 230
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.3e-35 Score=323.49 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=205.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+|++.+.||.|+||.||+|.+..+++.||+|++...... ....+.+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ---------- 70 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc----------
Confidence 588999999999999999999999999999999754432 245678999999999999999999887652
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|++|||+. ++|.+.+.....+++..+..++.||+.||.|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 71 ------------------------------DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred ------------------------------CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2457899999996 589999887778999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||||+||+++.++.++|+|||++....... ......|+..|+|||++.+ ..++.++|+|
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~ 183 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----------------LTTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------cccccCCChhhcCHHHHcc-cCCCCcccch
Confidence 9999999999999999999999999988653211 1123468889999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCCchhH--HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH--HHHHhccCC
Q 001059 594 SLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--TELLQDALP 663 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta--~eiL~~~~~ 663 (1170)
|||+++|+|++ ||..... .......... ..+......++.+.++|.+||+.||.+||++ .++++|+||
T Consensus 184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred hhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99999999996 6665442 2222222221 2222233456789999999999999999999 999999997
No 231
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=8.2e-35 Score=335.67 Aligned_cols=265 Identities=28% Similarity=0.391 Sum_probs=210.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|++..+|+.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPS-------- 72 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccC--------
Confidence 488999999999999999999988999999998765443445678999999999999999999998764321
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
......+|++|+|++++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 73 ---------------------------PEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred ---------------------------cccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 01124679999999999999998877899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.++|+|||++......... ........+|+.|+|||++.+...++.++|+|||
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 193 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSV 193 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc------------cccccccccccCcCCceeeecccCCCcchhHHHH
Confidence 9999999999999999999999999865322100 0112345789999999999885478999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHHHcc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~~~L 644 (1170)
|+++|+|++ ||......+....+....+..+ ......++++.++|.+||
T Consensus 194 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 273 (330)
T cd07834 194 GCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML 273 (330)
T ss_pred HHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc
Confidence 999999997 6654433332222211111100 011234668899999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCch
Q 001059 645 SPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+.+|.+|||+.++++|+||.+..
T Consensus 274 ~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 274 VFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cCChhhCCCHHHHHhCccHHhhc
Confidence 99999999999999999998754
No 232
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.1e-34 Score=323.86 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=203.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|||++++++++...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------- 70 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---------- 70 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC----------
Confidence 6788999999999999999998999999999986543334456788999999999999999999887331
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....+|++|||++++|..++... ..+++..++.++.||+.||+|||++|++
T Consensus 71 ----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 71 ----------------------------GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred ----------------------------CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 02578999999999999888765 5799999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
|+||||+||++++++.+||+|||++........ ...+...++..|+|||.+.+...++.++|||||
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~sl 188 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS--------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSV 188 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc--------------ccccccccccccCCceeeEccccCChHHHHHHH
Confidence 999999999999999999999999986532210 012334678899999988765568899999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC---------------------------Ccccc-CCHHHHHHHHHcc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------PSWVA-KFSEQESLLRRLM 644 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------~~~~~-~~~e~~~LI~~~L 644 (1170)
|+++|||++ ||...................+ ..... .++.+.++|++||
T Consensus 189 G~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 268 (287)
T cd07840 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLL 268 (287)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence 999999997 6655443322222211110000 00111 2668889999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.+|.+||++.++++|+||
T Consensus 269 ~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 269 TLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCChhhCcCHHHHhhCcCC
Confidence 9999999999999999996
No 233
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1e-34 Score=328.01 Aligned_cols=256 Identities=26% Similarity=0.368 Sum_probs=200.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|+..+.||+|+||.||++.+..+|+.||+|.+...... .....+.+|+.++.++. ||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-------- 74 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-------- 74 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--------
Confidence 5777888999999999999999999999999998754433 34567889999999996 9999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+++|||++.++.++.. ....+++..+..++.|++.||+|
T Consensus 75 --------------------------------~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 122 (288)
T cd06616 75 --------------------------------EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNY 122 (288)
T ss_pred --------------------------------CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 34568999999877655432 23569999999999999999999
Q ss_pred HHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CC
Q 001059 509 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PK 585 (1170)
Q Consensus 509 LHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~ 585 (1170)
||+. +++||||||+|||++.++.+||+|||++..+.... ......|++.|+|||++.+. ..
T Consensus 123 lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~ 186 (288)
T cd06616 123 LKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSARDG 186 (288)
T ss_pred HhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC----------------ccccccCccCccCHHHhccccccC
Confidence 9975 99999999999999999999999999997653211 11234688999999999874 36
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHH-HHHHHHhhhc-CCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQK-GELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l~~~-~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++.++|||||||++|+|++ ||...... +......... ..++ ......++++.+||.+||+.||++|||++++++
T Consensus 187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999997 66544321 1111111111 1111 122346778999999999999999999999999
Q ss_pred ccCCCCch
Q 001059 660 DALPPQME 667 (1170)
Q Consensus 660 ~~~~~~~~ 667 (1170)
|+|+....
T Consensus 267 ~~~~~~~~ 274 (288)
T cd06616 267 HPFIKDYE 274 (288)
T ss_pred Chhhhchh
Confidence 99997654
No 234
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-34 Score=335.87 Aligned_cols=266 Identities=26% Similarity=0.368 Sum_probs=208.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++++ +||||++++++|...
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---- 79 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---- 79 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC----
Confidence 456789999999999999999999998999999998864433334445678899999999 999999999887321
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+...+|+||||++++|...+... .+++..++.++.||+.||+|||
T Consensus 80 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH 124 (337)
T cd07852 80 ----------------------------------NDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIH 124 (337)
T ss_pred ----------------------------------CCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 23568999999999999888765 7899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++..+....... .........||+.|+|||++.+...++.++
T Consensus 125 ~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~s 194 (337)
T cd07852 125 SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP----------ENPVLTDYVATRWYRAPEILLGSTRYTKGV 194 (337)
T ss_pred HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc----------cCcchhcccccccccCceeeeccccccccc
Confidence 9999999999999999999999999999998653221100 001123357899999999887655688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--------------------------C--CCCCccccCCHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--------------------------G--ELPPSWVAKFSEQESL 639 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--------------------------~--~~p~~~~~~~~e~~~L 639 (1170)
|||||||++|+|++ ||................ . .........+.++.++
T Consensus 195 Di~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 274 (337)
T cd07852 195 DMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDL 274 (337)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHH
Confidence 99999999999997 665433222211111100 0 0111222356788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|.+||+.||.+|||+.++++|+|+.++
T Consensus 275 i~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 275 LKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHhccCCcccccCHHHHhhChhhhhh
Confidence 999999999999999999999988775
No 235
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.9e-34 Score=329.64 Aligned_cols=258 Identities=28% Similarity=0.442 Sum_probs=199.0
Q ss_pred CceEEeeeccCCcEEEEEEEEcc--CCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.|++.++||+|+||.||+|.++. +|+.||+|.+.... ........+.+|+.+++.++||||++++++|.+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 47889999999999999999998 89999999997533 1122345678899999999999999999987431
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+||||++++|.+.+... ..+++..++.++.||+.||+
T Consensus 75 --------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 122 (316)
T cd07842 75 --------------------------------ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH 122 (316)
T ss_pred --------------------------------CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence 23578999999998888776432 25899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecC----CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
|||+++|+||||||+|||++. ++.+||+|||+++....... .........+|+.|+|||++.+.
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~~ 190 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK------------PLADLDPVVVTIWYRAPELLLGA 190 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcc------------cccccCCccccccccCHHHHhCC
Confidence 999999999999999999999 89999999999986532210 01122345789999999988775
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHH---------H---HHHHh-----------------------hhcCCC
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQ---------I---VLSDL-----------------------KQKGEL 625 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~---------~---~~~~l-----------------------~~~~~~ 625 (1170)
..++.++|||||||++|+|++ ||....... . ....+ ......
T Consensus 191 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (316)
T cd07842 191 RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY 270 (316)
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCC
Confidence 568999999999999999997 664322111 0 00000 000001
Q ss_pred CC--------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 626 PP--------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 626 p~--------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+. .+...++++.++|.+||+.||.+|||+.++++||||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 10 001345678899999999999999999999999997
No 236
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.3e-34 Score=334.83 Aligned_cols=261 Identities=26% Similarity=0.427 Sum_probs=205.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++||||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~------ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR------ 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc------
Confidence 37899999999999999999999989999999998754434334567889999999999999999998774321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
........|+++++++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 90 ----------------------------~~~~~~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 90 ----------------------------SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred ----------------------------cccccccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 0012345789999998899887754 46999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+||+++.++.+||+|||+++.... ......||+.|+|||++.+...++.++|||
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 202 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 202 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEecccccccccc------------------cccccccCCCccCHHHHhCccCCCchhhHH
Confidence 99999999999999999999999999875321 112346889999999987655688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-----------------------CCC-----CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELP-----PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p-----~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||................. ..+ ..+...++++.++|.+
T Consensus 203 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (345)
T cd07877 203 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 282 (345)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 6643332222111111000 011 0112346788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+||++.++++|+||.+..
T Consensus 283 ~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 283 MLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HcCCChhhcCCHHHHhcChhhhhcC
Confidence 9999999999999999999998754
No 237
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.4e-34 Score=320.64 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=202.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+|+..+.||+|+||.||+|.+..+|+.||+|+++..... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC------- 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------
Confidence 477789999999999999999999999999999754321 123467899999999999999999998873
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+...++++|||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 74 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH 120 (268)
T cd06630 74 ---------------------------------EDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120 (268)
T ss_pred ---------------------------------cCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2456899999997 489999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++|++||||||+||+++.++ .+||+|||++.......... ........||..|+|||.+.+ ..++.+
T Consensus 121 ~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~-~~~~~~ 188 (268)
T cd06630 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------GEFQGQLLGTIAFMAPEVLRG-EQYGRS 188 (268)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------CccccccccccceeCHhHhcc-CCCCcc
Confidence 99999999999999998776 59999999998764221000 001123468999999999877 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
+|+||+||++|+|++ ||...... .............+......++++.+++.+||..+|.+||++.++++|+||.
T Consensus 189 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 189 CDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999999999997 66432211 1111111111222333334567899999999999999999999999999974
No 238
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.4e-34 Score=327.42 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=203.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|+..+.||+|+||+||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------- 86 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-------- 86 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--------
Confidence 458889999999999999999998999999999875433 33344678899999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+||||+++++.+.+.. ...+++..+..++.||+.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 87 --------------------------------EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred --------------------------------CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999999998887764 45699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~s 195 (307)
T cd06607 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 195 (307)
T ss_pred CceecCCCcccEEECCCCCEEEeecCcceecCC-------------------CCCccCCccccCceeeeccCCCCCCccc
Confidence 999999999999999999999999999875321 123468889999998752 24588999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||||+++|||++ ||.............. ...........+..+.++|.+||+.||.+||++.++++|+|+....
T Consensus 196 Dv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred chHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999997 6654433333222221 1111111223456889999999999999999999999999987653
No 239
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-34 Score=319.65 Aligned_cols=243 Identities=22% Similarity=0.316 Sum_probs=194.6
Q ss_pred eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~--~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+||+|+||.||+|.+ +.++..+|+|+++.........+.+.+|+.+++.++||||+++++++.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--------------- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------------
Confidence 689999999999975 456889999998765555555678999999999999999999998751
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+++|||++ ++|.+++.....+++..+..++.|++.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 67 --------------------------AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred --------------------------CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 234589999997 58999998877899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||++........ .........+++.|+|||.+.+ ..++.++|||||||+
T Consensus 121 lkp~nill~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~ 187 (257)
T cd05116 121 LAARNVLLVTQHYAKISDFGLSKALGADEN------------YYKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVL 187 (257)
T ss_pred cchhhEEEcCCCeEEECCCccccccCCCCC------------eeeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHH
Confidence 999999999999999999999986532110 0001122345689999999876 568899999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||++ ||......+.... +. .+..++.....++++.++|.+||+.||.+||++.+|.+.
T Consensus 188 l~el~t~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 188 MWEAFSYGQKPYKGMKGNEVTQM-IE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 999985 7765544433332 22 223333344577899999999999999999999999753
No 240
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.8e-34 Score=335.26 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS----- 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc-----
Confidence 368999999999999999999999899999999987544333344568899999999999999999988743210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||+..+|..++. ..+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 89 -----------------------------GDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred -----------------------------CCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999888777653 46899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 199 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADA------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIW 199 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC------------------CCCCceeeecccChhhhcCccccCchHHHH
Confidence 99999999999999999999999999875311 113457889999999987645688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhc-----------------------CCCC-----CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELP-----PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-----------------------~~~p-----~~~~~~~~e~~~LI~~ 642 (1170)
||||++|||++ ||...........++... ...+ ..++..++++.+||.+
T Consensus 200 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (342)
T cd07879 200 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279 (342)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHH
Confidence 99999999997 776543332222211100 0001 1122455678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+||++.++++|+||....
T Consensus 280 ~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 280 MLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HcCCChhhCcCHHHHhcCcchhhcc
Confidence 9999999999999999999997764
No 241
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.8e-34 Score=317.64 Aligned_cols=245 Identities=22% Similarity=0.373 Sum_probs=196.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||++.++ ++..+|+|.+...... ...+.+|+.+|+.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--------- 70 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc---------
Confidence 57999999999999999999986 5668999987643322 3578899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05114 71 -------------------------------QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN 119 (256)
T ss_pred -------------------------------CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 6899888653 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--------------TSSSGAKFPVKWSPPEVFNF-SKYSSKSDV 184 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCCCccccCCCce--------------eccCCCCCchhhCChhhccc-Cccchhhhh
Confidence 999999999999999999999999999986422110 01122346678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||+++|||++ ||......+........ ..+......++++.+++.+||+.+|.+||++.++++.
T Consensus 185 ~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 185 WSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG--FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999999997 67665554444443322 2222223345689999999999999999999999863
No 242
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-34 Score=325.43 Aligned_cols=253 Identities=26% Similarity=0.389 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN-------- 74 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec--------
Confidence 368899999999999999999999999999999987543 23446788999999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG- 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs- 511 (1170)
...+|+||||++ ++|.+++...+.+++..+..++.|++.||.|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 122 (284)
T cd06620 75 --------------------------------ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122 (284)
T ss_pred --------------------------------CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 357899999997 5888888887889999999999999999999997
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
.+++||||||+||+++.++.++|+|||++....... ....+|+..|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----------------~~~~~~~~~~~aPE~~~~-~~~~~~~D 184 (284)
T cd06620 123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----------------ADTFVGTSTYMSPERIQG-GKYTVKSD 184 (284)
T ss_pred cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-----------------cCccccCcccCCHHHHcc-CCCCccch
Confidence 689999999999999999999999999986542110 123478999999999876 46889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHH-----------HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMER-----------QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~-----------~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
||||||++|+|++ ||...... ........ ...+. .....++++.+||.+||+.||.+|||+.+
T Consensus 185 i~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e 262 (284)
T cd06620 185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ--EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQ 262 (284)
T ss_pred HHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh--ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHH
Confidence 9999999999996 77543321 11111111 11111 11225678999999999999999999999
Q ss_pred HHhccCCCCch
Q 001059 657 LLQDALPPQME 667 (1170)
Q Consensus 657 iL~~~~~~~~~ 667 (1170)
+++|+|+.+..
T Consensus 263 ~~~~~~~~~~~ 273 (284)
T cd06620 263 LCAMPPFIQAL 273 (284)
T ss_pred HhcCccccccc
Confidence 99999886653
No 243
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.8e-34 Score=326.39 Aligned_cols=268 Identities=26% Similarity=0.415 Sum_probs=206.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..++|++.+.||.|+||.||+|.++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~--- 80 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD--- 80 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcch---
Confidence 34678999999999999999999999999999999997654433344567889999999999999999988744210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
. .........+|++|||+++++...+... ..+++..++.++.||+.||+|||
T Consensus 81 ---~------------------------~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 81 ---A------------------------LDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ---h------------------------hhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0001123478999999999888877654 46999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+||++++++.+||+|||++........ .......+++.|+|||.+.+...++.++
T Consensus 134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 199 (302)
T cd07864 134 KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--------------RPYTNKVITLWYRPPELLLGEERYGPAI 199 (302)
T ss_pred hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc--------------cccccceeccCccChHHhcCCCCCCchh
Confidence 99999999999999999999999999999986532210 0112235688999999887645578999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CC--------------------------CccccCCHHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LP--------------------------PSWVAKFSEQESLL 640 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p--------------------------~~~~~~~~e~~~LI 640 (1170)
|||||||++|||++ ||................+. .+ ..+...++.+.++|
T Consensus 200 Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (302)
T cd07864 200 DVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLL 279 (302)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHH
Confidence 99999999999997 56544333222221111111 00 01223467889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 001059 641 RRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.+||+.||.+||++.+++.|+|+
T Consensus 280 ~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 280 DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999986
No 244
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-34 Score=352.96 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=194.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEe---------------cCCCChhhHHHHHHHHHHHHhccCC
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIR---------------LKDKSLPVNDRILREVATLSRLQHQ 414 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~---------------~~~~~~~~~~~~~~Ev~iL~~l~Hp 414 (1170)
..+.++|++++.||+|+||+||+|.++... ..+++|.+. ...........+.+|+.+|+.++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 446789999999999999999999875432 222222111 0011222345688999999999999
Q ss_pred CceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CC
Q 001059 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DH 489 (1170)
Q Consensus 415 nIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~ 489 (1170)
|||++++++.. ....|++|+++.++|...+... ..
T Consensus 224 nIv~l~~~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~ 263 (501)
T PHA03210 224 NILKIEEILRS----------------------------------------EANTYMITQKYDFDLYSFMYDEAFDWKDR 263 (501)
T ss_pred CcCcEeEEEEE----------------------------------------CCeeEEEEeccccCHHHHHhhcccccccc
Confidence 99999988733 3467999999998888876432 22
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
.....++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+..... ......+
T Consensus 264 ~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--------------~~~~~~~ 329 (501)
T PHA03210 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE--------------AFDYGWV 329 (501)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc--------------ccccccc
Confidence 44667889999999999999999999999999999999999999999999986532110 0123457
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCch--hHHHHHHHHhhhcC----CCC-------------
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTA--MERQIVLSDLKQKG----ELP------------- 626 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~--~~~~~~~~~l~~~~----~~p------------- 626 (1170)
||+.|+|||++.+ ..++.++|||||||++|||++ |+... .........+.... .+|
T Consensus 330 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~ 408 (501)
T PHA03210 330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA 408 (501)
T ss_pred CCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence 9999999999987 568999999999999999996 44321 11122222111100 000
Q ss_pred ----------Ccc--ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHH
Q 001059 627 ----------PSW--VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 671 (1170)
Q Consensus 627 ----------~~~--~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~ 671 (1170)
+.. ...+.++.++|.+||+.||.+|||+.|+|+||||.....+.+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEEEI 465 (501)
T ss_pred hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCchHH
Confidence 000 113346678899999999999999999999999987764443
No 245
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.3e-34 Score=317.34 Aligned_cols=254 Identities=30% Similarity=0.479 Sum_probs=209.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|++|.||+|.+..+|+.||||++...... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--------- 70 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc---------
Confidence 4789999999999999999999999999999998765432 446789999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~ 512 (1170)
...+|++|||++ ++|.+++.....+++..++.++.|++.||+|||+ +
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 71 -------------------------------EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 357899999998 6999999887889999999999999999999999 9
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++|+
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~---------------~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv 183 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD---------------QCNTFVGTVTYMSPERIQG-ESYSYAADI 183 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCCC---------------cccceeecccccCHhhhCC-CCCCchhhH
Confidence 999999999999999999999999999986532110 0123468899999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCCchh--HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||+++|+|++ ||.... ........+. ....+..... .+..+.++|.+||..+|++||++.++++|+|+++.
T Consensus 184 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 184 WSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999997 665543 2222222222 2222332333 56789999999999999999999999999998653
No 246
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-35 Score=291.29 Aligned_cols=257 Identities=26% Similarity=0.503 Sum_probs=208.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|...++||+|.||+||+|+++.+++.||+|.++..+.+...-...+||+-+|+.++|.|||++++...
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh---------- 71 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH---------- 71 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc----------
Confidence 4577788999999999999999999999999999988777667778999999999999999999997641
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+-+|+|||+.+|..+..+. +.++.+.++.++.|+++||.|+|+++
T Consensus 72 ------------------------------sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn 121 (292)
T KOG0662|consen 72 ------------------------------SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN 121 (292)
T ss_pred ------------------------------cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh
Confidence 24678899999999999988764 56999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
+.||||||.|.||+.+|.+||+|||+|+.+..+- ...+..+-|.+|.+|.++-|..-|+...|||
T Consensus 122 vlhrdlkpqnllin~ngelkladfglarafgipv---------------rcysaevvtlwyrppdvlfgakly~tsidmw 186 (292)
T KOG0662|consen 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186 (292)
T ss_pred hhhccCCcceEEeccCCcEEecccchhhhcCCce---------------EeeeceeeeeeccCcceeeeeehhccchHhh
Confidence 9999999999999999999999999999764321 1123457899999999999977799999999
Q ss_pred HHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCC----------------------CccccCCH----HHHHHHHHc
Q 001059 594 SLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELP----------------------PSWVAKFS----EQESLLRRL 643 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p----------------------~~~~~~~~----e~~~LI~~~ 643 (1170)
|.|||+.|+.. |..+..+ .....++...-+... ..|..+.| .-++|++++
T Consensus 187 sagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkl 266 (292)
T KOG0662|consen 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKL 266 (292)
T ss_pred hcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHH
Confidence 99999999984 5444333 333333333222111 01222222 236999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|..+|.+|.+++..+|||+|...
T Consensus 267 l~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 267 LKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hccCcccccCHHHHhcCcccccc
Confidence 99999999999999999988654
No 247
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=7.2e-34 Score=317.04 Aligned_cols=255 Identities=25% Similarity=0.442 Sum_probs=205.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|++.+.||+|+||.||+|.++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 479999999999999999999999999999999864321 223446788999999999999999999887432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....++++|||++ ++|.+.+.....+++..++.++.||+.||.|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH 123 (264)
T cd06653 77 ---------------------------------EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123 (264)
T ss_pred ---------------------------------CCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2356889999997 589999988778999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||||+||+++.++.++|+|||+++........ ....+...|+..|+|||.+.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (264)
T cd06653 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS------------GTGIKSVTGTPYWMSPEVISG-EGYGRKA 190 (264)
T ss_pred hCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc------------CccccccCCcccccCHhhhcC-CCCCccc
Confidence 999999999999999999999999999999865321100 001133568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+|||||++|+|++ ||.............. ....+..+...++++.++|.+||. +|..||++.+++.|||
T Consensus 191 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 191 DVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred cHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc-CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 99999999999996 7765544444433332 222233344566789999999999 5799999999999997
No 248
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.5e-34 Score=335.42 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=196.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.+.||.|+||.||+|.+.. +++.||+|+++... .......+.+|+.+++++ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 478999999999999999997543 45789999987433 233446788999999999 899999999887432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...++++|||++ ++|.+++...
T Consensus 84 -------------------------------------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (337)
T cd05054 84 -------------------------------------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQK 126 (337)
T ss_pred -------------------------------------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccc
Confidence 346789999997 5888877532
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceee
Q 001059 488 -----------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526 (1170)
Q Consensus 488 -----------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi 526 (1170)
..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill 206 (337)
T cd05054 127 EGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL 206 (337)
T ss_pred cccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE
Confidence 257889999999999999999999999999999999999
Q ss_pred cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc--
Q 001059 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-- 604 (1170)
Q Consensus 527 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-- 604 (1170)
+.++.+||+|||+++.+.... .........++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 207 ~~~~~vkL~DfG~a~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 207 SENNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred eCCCcEEEeccccchhcccCc-------------chhhccCCCCCccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcC
Confidence 999999999999998653211 0111233456788999999887 568999999999999999985
Q ss_pred --CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 605 --PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 605 --Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||......+.....+. .+..+......++++.+++.+||+.+|++||++.+++++
T Consensus 273 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 273 ASPYPGVQIDEEFCRRLK-EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCCCCCCccHHHHHHHh-ccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6654333233222222 222222333556789999999999999999999999986
No 249
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.3e-34 Score=319.38 Aligned_cols=250 Identities=28% Similarity=0.376 Sum_probs=195.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
+.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------- 76 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE----------- 76 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----------
Confidence 334468999999999999999899999999886433 2345678999999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhC
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++|||++ ++|.+++... ..+ ++..+..++.||+.||+|||++
T Consensus 77 -----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 127 (268)
T cd06624 77 -----------------------------NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127 (268)
T ss_pred -----------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 5999988754 445 8888999999999999999999
Q ss_pred CccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ks 590 (1170)
||+||||||+||+++. ++.+||+|||++....... .......|++.|+|||++.+. ..++.++
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~ 192 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEVIDKGPRGYGAPA 192 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecchhheecccCC---------------CccccCCCCccccChhhhccccccCCchh
Confidence 9999999999999986 6799999999987542111 011234588999999998653 2478999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||||||+++|+|++ ||...................+......++++.+++++||+.+|.+|||+.+++.|||+
T Consensus 193 Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 193 DIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 99999999999997 66543222211111111122222333456789999999999999999999999999996
No 250
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.2e-34 Score=358.22 Aligned_cols=266 Identities=25% Similarity=0.393 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++.++||+|+||.||+|++..+|+.||||+++.... ......++.+|+.+++.++||||+++++++.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d------- 73 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD------- 73 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-------
Confidence 3689999999999999999999999999999999975432 23345679999999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-----------CCCCHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------DHFDKELAWHLFR 500 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------~~l~e~~~~~i~~ 500 (1170)
....|++||||+ ++|.+++... ..++...++.++.
T Consensus 74 ---------------------------------~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~ 120 (932)
T PRK13184 74 ---------------------------------GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120 (932)
T ss_pred ---------------------------------CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHH
Confidence 356899999997 5898887631 2355677889999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccC-CCCCCC--CCCccccCcccccCccCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-AAFPTD--TGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~GT~~Y~AP 577 (1170)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......... ...... ...........+||+.||||
T Consensus 121 QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 121 KICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999987622110000 000000 00000011235799999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
|++.+ ..++.++|||||||++|||++ ||..........................++.+.+++.+||+.||++||+.
T Consensus 201 E~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 201 ERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred HHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence 99987 568999999999999999997 77654433322221111111111234567789999999999999999876
Q ss_pred HHHHhc
Q 001059 655 TELLQD 660 (1170)
Q Consensus 655 ~eiL~~ 660 (1170)
.+.+.+
T Consensus 280 ~eeLl~ 285 (932)
T PRK13184 280 VQELKQ 285 (932)
T ss_pred HHHHHH
Confidence 665543
No 251
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.2e-34 Score=330.58 Aligned_cols=264 Identities=25% Similarity=0.318 Sum_probs=204.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccC--CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLD--GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~t--g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|++.+.||+|+||.||+|.+..+ +..||||++............+.+|+.+++++ +||||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----- 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----- 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-----
Confidence 488999999999999999999888 89999999875433333456788999999999 5999999997653210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 76 -------------------------------~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (332)
T cd07857 76 -------------------------------GNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA 124 (332)
T ss_pred -------------------------------ccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1134578999999999999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++.+...... .........||+.|+|||++.+...++.++||
T Consensus 125 givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 125 NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-----------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred CcccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-----------ccccccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 9999999999999999999999999999865422110 00112345799999999988764568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhh-----------------------c-----CCCCCccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ-----------------------K-----GELPPSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~-----------------------~-----~~~p~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||............+.. . ..++......++.+.+++.
T Consensus 194 ~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (332)
T cd07857 194 WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLE 273 (332)
T ss_pred HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHH
Confidence 999999999996 66543322111111100 0 0011122234678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+||+.||.+|||+.+++.|+|+...
T Consensus 274 ~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 274 KLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHccCCcccCCCHHHHhcChhhhhh
Confidence 9999999999999999999987543
No 252
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.9e-34 Score=332.64 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=207.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 87 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL----- 87 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc-----
Confidence 357899999999999999999999999999999998654433344567889999999999999999998873221
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+||+|++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 88 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~ 137 (343)
T cd07880 88 -----------------------------SLDRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA 137 (343)
T ss_pred -----------------------------cccccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0011245799999998888887764 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||++...... .....+++.|+|||.+.+...++.++|+
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 199 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE------------------MTGYVVTRWYRAPEVILNWMHYTQTVDI 199 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccccccccC------------------ccccccCCcccCHHHHhCCCCCCcHHHH
Confidence 9999999999999999999999999998754211 1234678999999998764458899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||................... .......++.+.++|.
T Consensus 200 ~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 279 (343)
T cd07880 200 WSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHH
Confidence 999999999996 776543332222221111110 0112345667899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++++|+||....
T Consensus 280 ~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 280 KMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred HHcCCChhhCCCHHHHhcCccHhhhc
Confidence 99999999999999999999988763
No 253
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.8e-34 Score=316.73 Aligned_cols=250 Identities=33% Similarity=0.560 Sum_probs=203.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|.++.+|..||+|.+..........+.+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~---------- 70 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE---------- 70 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc----------
Confidence 4889999999999999999999999999999997654433445678899999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+++||++ ++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (257)
T cd08225 71 ------------------------------NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120 (257)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 59999887543 479999999999999999999999
Q ss_pred CccccCCCCCceeecCCCC-EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+++|+||||+||+++.++. +||+|||.+........ ......|++.|+|||++.+ ..++.++|
T Consensus 121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~ape~~~~-~~~~~~~D 184 (257)
T cd08225 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---------------LAYTCVGTPYYLSPEICQN-RPYNNKTD 184 (257)
T ss_pred CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc---------------cccccCCCccccCHHHHcC-CCCCchhh
Confidence 9999999999999998864 69999999986532110 0122368999999999877 46889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|||||++|||++ ||.............. ...++.....+.++.++|.+||..+|++|||+.++++|+|+
T Consensus 185 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 185 IWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ--GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999996 7765544444433322 22333334556789999999999999999999999999996
No 254
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-34 Score=322.51 Aligned_cols=250 Identities=19% Similarity=0.291 Sum_probs=198.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
+++|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ---- 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec----
Confidence 468999999999999999999863 356789999987433 23344678899999999999999999988632
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-----------------CCCC
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------------DHFD 491 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------------~~l~ 491 (1170)
....|++|||++ ++|.+++... ..++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 79 ------------------------------------EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred ------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 345799999997 5899888532 2378
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+.++..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY-------------YRVQPKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc-------------eecccCCCcc
Confidence 889999999999999999999999999999999999999999999999986532210 0112334567
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
..|+|||++.+ ..++.++|||||||++|||++ ||........ ...+. ....++.....++.+.+++.+||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05090 190 IRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEMVR-KRQLLPCSEDCPPRMYSLMTECWQEG 266 (283)
T ss_pred ceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccC
Confidence 88999999987 568999999999999999996 7765544333 23333 22333344556789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05090 267 PSRRPRFKDIHTR 279 (283)
T ss_pred cccCcCHHHHHHH
Confidence 9999999999875
No 255
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-35 Score=351.29 Aligned_cols=258 Identities=26% Similarity=0.466 Sum_probs=203.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+++.+.|.+|||+.||+|++...|..||+|.+-.. +....+.+.+||.+|+.|+ |||||.|++.....
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~------- 107 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN------- 107 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEecccccc-------
Confidence 4678899999999999999999988899999988655 4456778999999999996 99999999742110
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.........++|.||||. |+|.+++.. ..+|++.++++|++|+++|+++||
T Consensus 108 --------------------------~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 108 --------------------------RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred --------------------------ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 000111345789999998 699999974 356999999999999999999999
Q ss_pred hCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc--cCcccccCccCCCcccccCC--C
Q 001059 511 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV--DGTGQVGTYFYTAPEIEQGW--P 584 (1170)
Q Consensus 511 s~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~--~ 584 (1170)
... |||||||-+||||+.+++.||||||.|+-.... +........ ..-....|+.|.|||.+.-+ .
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~--------~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~ 233 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILS--------PTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL 233 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCC--------CccHHHHHHHHHHHHhhCCccccChHHHhhhcCC
Confidence 987 999999999999999999999999999843211 000000000 11123579999999975422 3
Q ss_pred CCCccchhHHHHHHHHHhh---cCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..++|+|||+|||+||-|+ +||..... +.++..+..+|+. +.++..+++||+.||+.||.+||++.|++.+
T Consensus 234 pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 234 PIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 5899999999999999998 49976533 4455666777765 5677899999999999999999999999875
No 256
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-34 Score=329.59 Aligned_cols=254 Identities=24% Similarity=0.402 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--------- 90 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--------- 90 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec---------
Confidence 45566678999999999999999899999999986432 2345678899999999999999999877632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..+.|++|||+++ +|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 91 -------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 91 -------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred -------------------------------CCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999975 7777764 456899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 139 ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 202 (292)
T cd06658 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---------------PKRKSLVGTPYWMAPEVISR-LPYGTEVDIW 202 (292)
T ss_pred EeecCCCHHHEEEcCCCCEEEccCcchhhccccc---------------ccCceeecCccccCHHHHcc-CCCCchhhHH
Confidence 9999999999999999999999999987542111 01133578999999999876 5688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||+++|||++ ||....................+.....+..+.++|.+||..||.+|||++++++|+||....
T Consensus 203 slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 203 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence 99999999997 776554433332222211222222334567899999999999999999999999999987553
No 257
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=315.96 Aligned_cols=272 Identities=26% Similarity=0.441 Sum_probs=219.0
Q ss_pred CCCccccCCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 348 LPSSRYLNDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 348 ~~~~~~~~~y~~-~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
..++.|.+-|.+ .+.||+|+|+.|--|....+|..||||+|.+... ....++.||++++.++ .|+||++++++|
T Consensus 70 s~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefF-- 145 (463)
T KOG0607|consen 70 SLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFF-- 145 (463)
T ss_pred cccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHh--
Confidence 344556555665 3579999999999999999999999999975532 3456899999999999 599999999877
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
++...+|+|||-+. |.|..++.++..|++.++.++..+|+.
T Consensus 146 --------------------------------------Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~ 187 (463)
T KOG0607|consen 146 --------------------------------------EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIAS 187 (463)
T ss_pred --------------------------------------cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHH
Confidence 34678999999995 699999999999999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||.|||.+||.||||||+|||-.... -+|||||.+.........-. | .......+.+|+..|||||+..
T Consensus 188 aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s----p----astP~L~tPvGSAEfMAPEVVd 259 (463)
T KOG0607|consen 188 ALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS----P----ASTPELLTPVGSAEFMAPEVVD 259 (463)
T ss_pred HHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC----C----CCCccccCcccchhhcchhHHh
Confidence 99999999999999999999987654 38999999987643222111 1 1122345678999999999753
Q ss_pred ---C-CCCCCccchhHHHHHHHHHhhc---CCCchhH---------------HHHHHHHhhhcCCCCC-ccccCCHHHHH
Q 001059 582 ---G-WPKIDEKADMYSLGIVFFELWH---PFSTAME---------------RQIVLSDLKQKGELPP-SWVAKFSEQES 638 (1170)
Q Consensus 582 ---~-~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~---------------~~~~~~~l~~~~~~p~-~~~~~~~e~~~ 638 (1170)
+ ...|+.++|.||||||||-|++ ||.+.-. ...+-.+...+..+|. .|..++.++++
T Consensus 260 ~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakd 339 (463)
T KOG0607|consen 260 VFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKD 339 (463)
T ss_pred hhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHH
Confidence 2 1359999999999999999996 6653211 2223344445666775 88899999999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
+|+.+|..|+.+|.++.++++|||++....+
T Consensus 340 lisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 340 LISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 9999999999999999999999999987644
No 258
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=3.1e-34 Score=319.16 Aligned_cols=248 Identities=29% Similarity=0.458 Sum_probs=202.1
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||.|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.++||||+++++.+.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------------- 64 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD---------------- 64 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc----------------
Confidence 6999999999999998999999999975443 22345679999999999999999999987632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
...+|++|||++ ++|.+++.+...+++..+..++.||+.||+|||++|++|+|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 65 ------------------------KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred ------------------------CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 356799999996 5999999888789999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+||+++.++.+||+|||++....... ......|++.|+|||.+.+ ..++.++|+||||+++|
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~ 183 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ----------------KTWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLY 183 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc----------------ccccccCCcCccChhHhcC-CCCCChhhhhhhHHHHH
Confidence 999999999999999999998653211 1123468899999999876 56899999999999999
Q ss_pred Hhhc---CCCchh--HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 001059 601 ELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 668 (1170)
Q Consensus 601 ELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 668 (1170)
+|++ ||.... .......... ....+......++++.++|.+||+.+|.+||+ ++++++||||....+
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILK-GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 9996 776554 3333333331 11122222233678999999999999999999 999999999987654
No 259
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-35 Score=333.99 Aligned_cols=291 Identities=24% Similarity=0.408 Sum_probs=221.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.-|..++.||-|+||+|.+++...|...||+|.+++.+.-. .....+.-|-.||...+.+.||++|..|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF---------- 698 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF---------- 698 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe----------
Confidence 45778999999999999999999999999999997655322 1234567788999999999999999777
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
++..++|+||+|++ |++..+|.+.+-|.|..|++|+.++..|+++.|..
T Consensus 699 ------------------------------QDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 699 ------------------------------QDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred ------------------------------ccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 45788999999997 59999999999999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccc---ccccCCCCC-CC-----------------------CCCccccC
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFP-TD-----------------------TGGVSVDG 565 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~---~~~~~~~~~-~~-----------------------~~~~~~~~ 565 (1170)
|+|||||||+|||||.+|++||+|||+|+-+.-. .+.+....+ .+ .....+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~a 828 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILA 828 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999754211 111100000 00 00111223
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHH--HhhhcCCCCCccccCCHHHHHHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS--DLKQKGELPPSWVAKFSEQESLL 640 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~--~l~~~~~~p~~~~~~~~e~~~LI 640 (1170)
.+.+||+.|+|||++.. ..|+..||+||.|||||||+. ||....+.+...+ .++....++ ...+.++++.++|
T Consensus 829 hslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~-~~~~ls~e~~~li 906 (1034)
T KOG0608|consen 829 HSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIP-YQGNLSKEALDLI 906 (1034)
T ss_pred hhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccc-cccccCHHHHHHH
Confidence 46689999999999987 569999999999999999994 8876554433322 222222233 3456678999999
Q ss_pred HHccCCCCCCCC---CHHHHHhccCCCCchHHHHHHH----HHhcCCCCCccchh
Q 001059 641 RRLMSPSPSDRP---SATELLQDALPPQMEYELLDNI----LRMMHSSEDTSIYD 688 (1170)
Q Consensus 641 ~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~ 688 (1170)
.++.+ +++.|. .++++-.|+||+...+..+... ...+..+.|.+.++
T Consensus 907 ~kLc~-sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFd 960 (1034)
T KOG0608|consen 907 QKLCC-SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFD 960 (1034)
T ss_pred HHHhc-ChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccCCCccccCC
Confidence 87654 566776 5788999999999988776543 23344555665554
No 260
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4e-34 Score=322.53 Aligned_cols=248 Identities=27% Similarity=0.383 Sum_probs=192.2
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhh-HHHHHHHHHHHHh---ccCCCceeEEEEEeecCccccCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREVATLSR---LQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~-~~~~~~Ev~iL~~---l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
.||+|+||.||++.+..+|+.||+|.+......... ...+.+|..+++. .+||||+.+++.+..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT------------ 68 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec------------
Confidence 489999999999999999999999998754332221 2234455544443 479999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
...+|+||||++ ++|.+++...+.+++..+..++.||+.||+|||++||+|
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 120 (279)
T cd05633 69 ----------------------------PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120 (279)
T ss_pred ----------------------------CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 346799999997 589888888888999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++.++|+|||++...... ......||+.|+|||.+.+...++.++||||||
T Consensus 121 ~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 183 (279)
T cd05633 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLG 183 (279)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceecccc-----------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence 999999999999999999999998753211 012346899999999986435588999999999
Q ss_pred HHHHHhhc---CCCchhH--HHHHHH-HhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCC
Q 001059 597 IVFFELWH---PFSTAME--RQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 665 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~--~~~~~~-~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~ 665 (1170)
|++|+|++ ||..... ...... ........ ....++++.++|++||..||.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL---PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC---ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999997 7753321 111111 11111112 234567899999999999999999 6999999999998
Q ss_pred chHH
Q 001059 666 MEYE 669 (1170)
Q Consensus 666 ~~~~ 669 (1170)
..+.
T Consensus 261 ~~~~ 264 (279)
T cd05633 261 IDWQ 264 (279)
T ss_pred CCHh
Confidence 7643
No 261
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=6.5e-34 Score=318.42 Aligned_cols=255 Identities=29% Similarity=0.486 Sum_probs=201.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------hhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 477889999999999999999989999999988643211 1123467889999999999999999987622
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++||||++ ++|.+++...+.+++..+..++.||+.||
T Consensus 80 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 80 --------------------------------------EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 356799999996 58999998888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-C
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-K 585 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~ 585 (1170)
.|||++|++||||||+||+++.++.++|+|||+++...... . ........|+..|+|||.+.... .
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~-----------~~~~~~~~~~~~y~~PE~~~~~~~~ 188 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY--D-----------NDQNMSMQGSVFWMAPEVIHSYSQG 188 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc--c-----------ccccccccCCccccCHHHhccccCC
Confidence 99999999999999999999999999999999997532110 0 00123356889999999987633 4
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++.++|+||||+++|+|++ ||......+........ ....+. .....+..+.++|.+||..+|.+|||++++++
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 7899999999999999997 66543333333222211 111222 22345678999999999999999999999999
Q ss_pred ccCC
Q 001059 660 DALP 663 (1170)
Q Consensus 660 ~~~~ 663 (1170)
|||+
T Consensus 269 ~~~~ 272 (272)
T cd06629 269 HPFI 272 (272)
T ss_pred CCCC
Confidence 9985
No 262
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.1e-34 Score=334.76 Aligned_cols=262 Identities=26% Similarity=0.422 Sum_probs=208.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 87 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS----- 87 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc-----
Confidence 457899999999999999999999999999999998754444444567889999999999999999887653210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+++||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 88 -----------------------------~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~ 137 (343)
T cd07851 88 -----------------------------SLEDFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA 137 (343)
T ss_pred -----------------------------cccccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0012345899999999999988865 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||++...... .....+|+.|+|||.+.+...++.++||
T Consensus 138 gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (343)
T cd07851 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 199 (343)
T ss_pred CeecCCCCHHHeEECCCCCEEEcccccccccccc------------------ccCCcccccccCHHHHhCCCCCCchHhH
Confidence 9999999999999999999999999999754211 1334688999999998764467899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||...........+....+..+ ......++++.++|.
T Consensus 200 wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~ 279 (343)
T cd07851 200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHH
Confidence 999999999997 6654443333222221111100 111234678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++++|||+.+..
T Consensus 280 ~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 280 KMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HhCCCChhhCCCHHHHhcCCCccccC
Confidence 99999999999999999999998764
No 263
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6e-34 Score=319.99 Aligned_cols=250 Identities=21% Similarity=0.286 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++ .++..||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--- 80 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 80 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 367999999999999999999875 23568999988533 233345678899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------CCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~e~~~~~ 497 (1170)
....+++|||++ ++|.+++.... .++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05062 81 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123 (277)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHH
Confidence 345799999997 58998886532 356788899
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.|++.||+|||++|++||||||+|||++.++.+||+|||+++........ .......+++.|+||
T Consensus 124 ~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05062 124 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 190 (277)
T ss_pred HHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------ecCCCCccCHhhcCh
Confidence 9999999999999999999999999999999999999999999754321110 011223567899999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|||++ ||............. ....+......++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (277)
T cd05062 191 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 267 (277)
T ss_pred hHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 99987 568999999999999999986 665544433332222 22223333455678999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.+++++
T Consensus 268 ~~e~l~~ 274 (277)
T cd05062 268 FLEIISS 274 (277)
T ss_pred HHHHHHH
Confidence 9999875
No 264
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.5e-34 Score=318.15 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=196.8
Q ss_pred eEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.+.+.||+|+||.||+|.+..++. .||+|.++....+......+.+|+.+++.++||||+++++.+.....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE------- 74 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc-------
Confidence 466889999999999999987765 69999987655555566788999999999999999999988743210
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES------YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~------~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.......+++|||++ ++|.+++.. ...+++..+..++.||+.||+|
T Consensus 75 ---------------------------~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 75 ---------------------------SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred ---------------------------ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 011235689999997 688887632 2348899999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~~~ 193 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY-------------YRQGRIAKMPVKWIAIESLAD-RVYTT 193 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc-------------eecCCcccCCcccCCHHHccC-CCcCh
Confidence 9999999999999999999999999999999986532210 011122356778999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||......+.... +. .+..++.....+..+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 194 KSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY-LR-QGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 6655444333322 22 223333334566789999999999999999999999875
No 265
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=7.2e-34 Score=319.68 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=197.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||.|+||+||+|++..+|. .||+|+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC----
Confidence 4689999999999999999999987776 4899988643 333445678899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+++|||++ |+|.+.+... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (279)
T cd05109 81 -------------------------------------STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMS 123 (279)
T ss_pred -------------------------------------CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 23578999997 6999988764 46999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||+++++.+||+|||+++....... ........+++.|+|||++.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (279)
T cd05109 124 YLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET-------------EYHADGGKVPIKWMALESILH-RRFT 189 (279)
T ss_pred HHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc-------------eeecCCCccchhhCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001122345678999999877 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||........ ...+. .+..++.....++++.+++.+||+.||++||++.+++..
T Consensus 190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLE-KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999875 5554333322 22222 333333445567899999999999999999999999853
No 266
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=7e-34 Score=328.48 Aligned_cols=256 Identities=29% Similarity=0.491 Sum_probs=203.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP------- 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-------
Confidence 4789999999999999999999999999999999865444334456788999999999999999999887432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||++++|..++.. ..+++..+..++.||+.||+|||++|
T Consensus 82 --------------------------------~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 82 --------------------------------LEDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred --------------------------------CCcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 245789999999899887764 45888999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++..... ......+++.|+|||++.+...++.++|||
T Consensus 129 iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 190 (328)
T cd07856 129 VVHRDLKPSNILINENCDLKICDFGLARIQDP------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 190 (328)
T ss_pred cccCCCCHHHEeECCCCCEEeCccccccccCC------------------CcCCCcccccccCceeeeccCCcCcHHHHH
Confidence 99999999999999999999999999874321 112346788999999887645689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHH--------------------------hhhcCCCC--CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSD--------------------------LKQKGELP--PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~--------------------------l~~~~~~p--~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||............ .......| ......++++.++|++
T Consensus 191 slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (328)
T cd07856 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK 270 (328)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence 99999999997 66433221111000 00000111 1122355789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.+|.+|||+++++.|+|+....
T Consensus 271 ~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 271 MLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred HcCCChhhCCCHHHHhcCCcccccc
Confidence 9999999999999999999997553
No 267
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=338.77 Aligned_cols=249 Identities=22% Similarity=0.356 Sum_probs=204.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---E-EEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---H-YAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~-vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++-.+.++||+|+||+||+|+.+..+. . ||||..+... .......++.+|.++|++++|||||++||++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 456667999999999999999986533 3 8999887533 556677889999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC-CCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH-FDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~-l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|||||+|. |+|.++|.+.+. ++..+...++.+.+.||+
T Consensus 233 ------------------------------------~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~ 276 (474)
T KOG0194|consen 233 ------------------------------------EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLE 276 (474)
T ss_pred ------------------------------------CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHH
Confidence 456899999996 599999998774 999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++++|||||-.+|||++.++.+||+|||+++.-..-. .......-...|+|||.+.. ..|+
T Consensus 277 YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~---------------~~~~~~klPirWLAPEtl~~-~~~s 340 (474)
T KOG0194|consen 277 YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV---------------MKKFLKKLPIRWLAPETLNT-GIFS 340 (474)
T ss_pred HHHHCCCcchhHhHHHheecCCCeEEeCccccccCCccee---------------eccccccCcceecChhhhcc-Cccc
Confidence 9999999999999999999999999999999987532000 00111134568999999998 5899
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+++|||||||++||+++ ||.+....+....+.......+. ....+.++..++.+||..||++||++.++.+.
T Consensus 341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 341 FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-CCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 99999999999999985 88888777776666553333332 23556688999999999999999999999863
No 268
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.4e-34 Score=327.42 Aligned_cols=252 Identities=24% Similarity=0.434 Sum_probs=201.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+....||.|+||.||+|.+..+++.||+|.+...... ....+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~---------- 89 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLV---------- 89 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheee----------
Confidence 444556899999999999999999999999999754332 34568899999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|++|||+++ +|..++.. ..+++..++.++.||+.||+|||++|+
T Consensus 90 ------------------------------~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 90 ------------------------------GEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred ------------------------------CCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3568999999975 77776543 568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..++.++||||
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 202 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-TPYGTEVDIWS 202 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhccccc---------------ccccceecCccccCHHHHcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 01133578999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||++|||++ ||......+...................++.+.++|.+||+.+|.+||++.++++|+|+.+.
T Consensus 203 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 203 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 9999999997 76655444333322211111222334556789999999999999999999999999987765
No 269
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.7e-34 Score=321.55 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=198.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.+.||+|+||.||+|.+.. ++..||||+++.... ......+.+|+++|+.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTE--- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEec---
Confidence 3578899999999999999998853 367899999864322 2345689999999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------CCCCHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------DHFDKE 493 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------~~l~e~ 493 (1170)
...+|++|||++ ++|.+++... ..+++.
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05049 80 -------------------------------------GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122 (280)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH
Confidence 346799999996 5999988654 237888
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
.+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.+..... ........+++.
T Consensus 123 ~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05049 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-------------YRVGGHTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc-------------eecCCCCcccce
Confidence 9999999999999999999999999999999999999999999999975422110 001123356789
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......+..+.+++.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 266 (280)
T cd05049 190 WMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT--QGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266 (280)
T ss_pred ecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 999999987 568999999999999999996 665554444333332 2333333345677999999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+||++.++++.
T Consensus 267 ~Rp~~~eil~~ 277 (280)
T cd05049 267 QRINIKDIHER 277 (280)
T ss_pred cCCCHHHHHHH
Confidence 99999999863
No 270
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7.2e-34 Score=314.37 Aligned_cols=243 Identities=22% Similarity=0.344 Sum_probs=190.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
+.||+|+||.||+|+++.+|+.||+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 64 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--------------- 64 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------------
Confidence 3699999999999999999999999987633 233445679999999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...+|+||||++ ++|.+++.... .+++..++.++.|++.||+|||++|++|||
T Consensus 65 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 65 -------------------------KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred -------------------------CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 345799999996 58999887544 589999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||+
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i 185 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSREEEDGVY-------------ASTGGMKQIPVKWTAPEALNY-GRYSSESDVWSFGIL 185 (252)
T ss_pred cchheEEEcCCCcEEECccccCcccccccc-------------cccCCCCCCceeecCchhhcC-CCCChHHHHHHHHHH
Confidence 999999999999999999999875421100 000111223567999999887 568999999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||++ ||.......... .+. ....++.....+..+.+++.+||+.+|++|||+.++++.
T Consensus 186 l~e~~~~~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 186 LWEAFSLGAVPYANLSNQQTRE-AIE-QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred HHHHHhCCCCCccccCHHHHHH-HHH-cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999985 565443333222 222 122222334556789999999999999999999999863
No 271
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.4e-34 Score=316.34 Aligned_cols=246 Identities=23% Similarity=0.320 Sum_probs=197.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--------- 73 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcC---------
Confidence 57899999999999999999999999999999986432 234578899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 122 (263)
T cd05052 74 -------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122 (263)
T ss_pred -------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999996 6899988653 358999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++||||||+|||++.++.+||+|||++........ .......+++.|+|||.+.+ ..++.++|
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------------TAHAGAKFPIKWTAPESLAY-NKFSIKSD 187 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCcccccccccee--------------eccCCCCCccccCCHHHhcc-CCCCchhH
Confidence 9999999999999999999999999999986532210 00112234678999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||++|||++ ||......+.. ..+. ....++.....++++.++|.+||+.||++|||+.++++.
T Consensus 188 v~slG~il~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 188 VWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 9999999999986 66544333322 2222 222223334567899999999999999999999999864
No 272
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.5e-34 Score=331.19 Aligned_cols=272 Identities=28% Similarity=0.390 Sum_probs=205.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++.+.||.|+||.||+|.++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~--- 78 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL--- 78 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccc---
Confidence 3689999999999999999999999999999999876543 34567889999999999999999987764321000
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
........+...+|++|||++++|.+.+.. ..+++..++.++.||+.||.|||++|
T Consensus 79 -----------------------~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 79 -----------------------TEDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred -----------------------ccccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 000011123457899999999999887754 46899999999999999999999999
Q ss_pred ccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 514 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|+||||||+||+++. ++.+||+|||+++.+...... ....+...|+..|+|||.+.+...++.++||
T Consensus 135 ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 202 (342)
T cd07854 135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM 202 (342)
T ss_pred cccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------ccccccccccccccCHHHHhCccccCchhhH
Confidence 999999999999985 467899999999764321100 0001223688999999987654568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc----------------------CC---CC--CccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE---LP--PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~----------------------~~---~p--~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||....+.......+... .. .+ ......+.++.+||.+
T Consensus 203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (342)
T cd07854 203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ 282 (342)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence 999999999996 776544333322221100 00 00 0112355688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.||.+|||+.++++|+|+...
T Consensus 283 ~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 283 ILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HhCCCchhccCHHHHhCCCccccc
Confidence 999999999999999999999754
No 273
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=4.3e-34 Score=318.73 Aligned_cols=248 Identities=27% Similarity=0.512 Sum_probs=198.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|.++.+|+.||||.+..... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------- 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--------
Confidence 578999999999999999999999999999998875432 23344678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...++++|||+++ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08229 74 --------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999974 88888763 3458999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.
T Consensus 122 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~ape~~~~-~~~~~ 185 (267)
T cd08229 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC---------------cccccccCCcCccCHHHhcC-CCccc
Confidence 999999999999999999999999999999987653211 01123468999999999977 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH-HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++||||||+++|+|++ ||...... ......+. ....++ .....++++.++|.+||+.||.+|||+.+|++
T Consensus 186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh-cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999997 66543221 12222222 222222 22345678999999999999999999998875
No 274
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.2e-34 Score=320.06 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=203.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc---CCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.|+..+.||.|+||.||+|.+..+|+.||+|.++... .......+.+|+.+++.++ ||||++++++|.+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~------- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK------- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-------
Confidence 5788899999999999999999999999999987543 2234567889999999996 9999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|++|||+++ +|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~ 119 (277)
T cd06917 74 ---------------------------------GPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHK 119 (277)
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999965 88888765 478999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
.||+|+||+|+||+++.++.++|+|||++..+.... .......|++.|+|||.+.+...++.++|
T Consensus 120 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 184 (277)
T cd06917 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS---------------SKRSTFVGTPYWMAPEVITEGKYYDTKAD 184 (277)
T ss_pred CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---------------cccccccCCcceeCHHHhccCCccccchh
Confidence 999999999999999999999999999998653221 01123468999999999876455789999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+|||||++|+|++ ||............. ....+.... ..++++.++|.+||+.||++||++.+++.|+|+.+..
T Consensus 185 v~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 185 IWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999997 776544332222111 111222111 2567899999999999999999999999999997765
No 275
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.4e-34 Score=320.76 Aligned_cols=245 Identities=30% Similarity=0.510 Sum_probs=191.7
Q ss_pred eEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 358 EELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++.+.||.|.||.||+|.+. ..+..|+||.++. .......+.+.+|+..+++++||||+++++++..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-------- 72 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-------- 72 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--------
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccc--------
Confidence 46789999999999999998 4467899999954 2344457889999999999999999999999853
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+++|||||+ |+|.+++... ..+++...+.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 73 --------------------------------NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp --------------------------------SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 233789999997 6999999876 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++++|+||+|+|||++.++.+||+|||++........ ........+...|+|||.+.+ ..++.++
T Consensus 121 ~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ks 186 (259)
T PF07714_consen 121 SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-------------YKNDSSQQLPLRYLAPEVLKD-GEYTKKS 186 (259)
T ss_dssp HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-------------EEESTTSESGGGGS-HHHHHH-SEESHHH
T ss_pred cccccccccccccccccccccccccccccccccccccc-------------ccccccccccccccccccccc-ccccccc
Confidence 99999999999999999999999999999986521110 011233457788999999987 4589999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||+++|||++ ||......+.... +. .+..++.....+..+.++|.+||+.||.+|||+.+|++
T Consensus 187 DVysfG~~l~ei~~~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 187 DVYSFGMLLYEILTLGKFPFSDYDNEEIIEK-LK-QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHHHHHTTSSGTTTTSCHHHHHHH-HH-TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccccccccccccccccccccc-cc-ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 99999999999997 6665544443333 32 33334444556789999999999999999999999986
No 276
>PRK14799 thrS threonyl-tRNA synthetase; Provisional
Probab=100.00 E-value=5.3e-34 Score=342.84 Aligned_cols=357 Identities=15% Similarity=0.151 Sum_probs=261.2
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
..+.|+++|+|.++.+++.|++.+++.+.++||++|.||.+ ++ .++.+.+.++||.+ |.+|+.++|||+.|++
T Consensus 155 ~~~~G~~~~lP~G~~i~~~L~~~~r~~~~~~Gy~eV~TP~i~~~eL~k~SGh~~~y~~~mf~~-~~~~e~~~LrPm~cp~ 233 (545)
T PRK14799 155 EAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVF-NMEGDEYGVKPMNCPA 233 (545)
T ss_pred ccCCcceEEcChHHHHHHHHHHHHHHHHHHcCCeEEECCccchHHHHhhccccccchhhccee-eccCceEEeccCCCHH
Confidence 45789999999999999999999999999999999999999 22 23345588999988 8889999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeEEcCCCCC-----CCCceeEeEEEEeCCCCcc-cHH-HHHHHHHHHHHHcCCC-c
Q 001059 787 FIRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHA-E 854 (1170)
Q Consensus 787 iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~-aDa-Evi~la~~~l~~lgi~-~ 854 (1170)
++|+++.+. ..|+|+|++|+|||+|+++. |.|+|+|.++++||.++.. +|+ |++.++.++++.+|++ .
T Consensus 234 ~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~RvReF~Q~DaHif~~~~q~~~E~~~~l~~i~~vy~~fG~~~~ 313 (545)
T PRK14799 234 HILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDD 313 (545)
T ss_pred HHHHHhccccChhhCCHhhEEecceecCCCCCCccccccceeEEEcccEEEeCHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999988742 46999999999999998874 6678999999999999874 887 9999999999999996 2
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
++.+.++++. .+.+|.++.|.+....+ ++++.+.|++....+...+++ |
T Consensus 314 ~~~i~ls~Rp-----e~~~G~~~~wdka~~~l----------------------~~~L~~~gl~~~~~~g~gafy----g 362 (545)
T PRK14799 314 DIKPYLSTRP-----DESIGSDELWEKATNAL----------------------ISALQESGLKFGIKEKEGAFY----G 362 (545)
T ss_pred cEEEEEEcCh-----hhhcCCHHHHHHHHHHH----------------------HHHHHHcCCCeEEecceeccc----c
Confidence 4999999985 34566654332221111 223333444433333333332 2
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
+.. +..+..++.+. .. + ..+.+|+.+.+.++ + +.+..+ + .
T Consensus 363 pki------------D~~v~dalgr~-~q---~-~Tiqldf~lp~rf~----L--ey~~~~-~--------------~-- 402 (545)
T PRK14799 363 PKI------------DFEIRDSLGRW-WQ---L-STIQVDFNLPERFK----L--EYIDKD-G--------------I-- 402 (545)
T ss_pred Ccc------------ceEehhhcCch-hh---h-hhhhhhcCcccccc----e--EEEcCC-C--------------C--
Confidence 100 00111122211 00 0 12334444444333 1 111110 0 0
Q ss_pred chhhhhcccccccccCCCCCCC-CceEEeccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPP-SGVGASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~-pAvGfaiglerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
..+++ ...|+..|+||++.+|.+ +..+ ...+|.+|+|++.+ +....+|.++++.||+
T Consensus 403 -----------------~~~pv~ihr~~~GgiERli~iL~e~~~G~~P-~wlaP~qV~Iipi~-e~~~~~A~~Ia~~LR~ 463 (545)
T PRK14799 403 -----------------KKRPVMVHRAIYGSIDRFVAILLEHFKGKLP-TWLSSVQVRVLPIT-DEVNEYAEKVLNDMRK 463 (545)
T ss_pred -----------------CcccEEEEccCCCCHHHHHHHHHHHcCCCCC-CCCCCceEEEEEcC-HHHHHHHHHHHHHHHh
Confidence 00111 122677799999988853 3222 22467899999996 6678899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.|++|+++.. ++++++++++|++.|+|++++||++|.++|+|+||++.+++|..++++++++.+.+.+.+
T Consensus 464 ~GirVelD~~-~~~lgkkir~A~k~gip~viIIG~~E~e~~~VtVR~r~~~eq~~v~l~eli~~l~~~i~~ 533 (545)
T PRK14799 464 RRIRAEIDYA-GETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQ 533 (545)
T ss_pred CCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEChhHhhcCeEEEEECCCCceEEEcHHHHHHHHHHHHhh
Confidence 9999998876 679999999999999999999999999999999999999999999999999999887764
No 277
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.3e-34 Score=328.27 Aligned_cols=272 Identities=25% Similarity=0.384 Sum_probs=206.3
Q ss_pred CCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------------hHHHHHHHHHHHHhccCCCceeEEE
Q 001059 355 NDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------VNDRILREVATLSRLQHQHVVRYYQ 421 (1170)
Q Consensus 355 ~~y~~-~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------------~~~~~~~Ev~iL~~l~HpnIV~l~~ 421 (1170)
++|.. .+.||.|+||+||+|.++.+|+.||||+++....... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45554 4679999999999999999999999999875433210 0124779999999999999999998
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 501 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 501 (1170)
+|.. ...+|++|||++++|.+++.....+++..+..++.|
T Consensus 88 ~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~q 127 (335)
T PTZ00024 88 VYVE----------------------------------------GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQ 127 (335)
T ss_pred EEec----------------------------------------CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHH
Confidence 8732 356899999999999999988788999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++|++||||||+||+++.++.+||+|||++............... .............+++.|+|||.+.
T Consensus 128 l~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~aPE~~~ 206 (335)
T PTZ00024 128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKD-ETMQRREEMTSKVVTLWYRAPELLM 206 (335)
T ss_pred HHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccc-ccccccccccccccccCCCCChhcc
Confidence 999999999999999999999999999999999999999865422111100000 0000111223446789999999987
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---------------------CC----ccccCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---------------------PP----SWVAKF 633 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---------------------p~----~~~~~~ 633 (1170)
+...++.++|||||||++|||++ ||....+......+....+.. +. .....+
T Consensus 207 ~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
T PTZ00024 207 GAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS 286 (335)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC
Confidence 75557999999999999999997 665444433322221111100 00 112345
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.++.++|++||+.+|++|||+++++.|+||....
T Consensus 287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 287 DDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred hHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6789999999999999999999999999998775
No 278
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.5e-34 Score=330.71 Aligned_cols=261 Identities=20% Similarity=0.307 Sum_probs=198.4
Q ss_pred eeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G--~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
..||+| +||+||+|.+..+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------------- 70 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT------------- 70 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------------
Confidence 456777 99999999999999999999998665555556788999999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
...+|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 71 ---------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 71 ---------------------------GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred ---------------------------CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 356799999997 5898888764 3589999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 594 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwS 594 (1170)
||||||+|||++.++.+|++||+.+............. ........++..|+|||++.+. ..++.++||||
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws 195 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV--------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS 195 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc--------ccccccccCccCccChhhhcCCCCCCCchhhHHH
Confidence 99999999999999999999998765432211000000 0001112456789999998763 34789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--------------------------------------------C
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--------------------------------------------P 627 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--------------------------------------------~ 627 (1170)
|||++|||++ ||......+.....+......| +
T Consensus 196 lG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (328)
T cd08226 196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP 275 (328)
T ss_pred HHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence 9999999996 6655444333333222111100 1
Q ss_pred ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 628 ~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
.....++.+.+||++||+.||++|||++++++|+||.+....
T Consensus 276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 112234578999999999999999999999999998776654
No 279
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.1e-33 Score=316.08 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=198.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
|.+.+.||+|+||.||+|.+..+ +..||+|.++...........+.+|+..++.++||||+++++++.+..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS------ 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC------
Confidence 56788999999999999998754 478999999865555555678999999999999999999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc------CCCCHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qI~~gL 506 (1170)
........+++|||++ ++|..++... ..+++..++.++.|++.||
T Consensus 75 ----------------------------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL 126 (273)
T cd05035 75 ----------------------------SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126 (273)
T ss_pred ----------------------------ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHH
Confidence 0112356799999997 5888887432 3589999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||+++++||||||+||++++++.+||+|||+++........ .......++..|+|||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05035 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY-------------RQGRIAKMPVKWIAIESLAD-RVY 192 (273)
T ss_pred HHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc-------------cccccccCCccccCHhhccc-CCC
Confidence 9999999999999999999999999999999999865322110 01112345678999999876 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+..... . .+..+......++++.+++.+||+.||.+|||+.+++++
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL-R-HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-H-cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999985 56544443333222 2 223333344567899999999999999999999999875
No 280
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.3e-33 Score=314.23 Aligned_cols=248 Identities=28% Similarity=0.518 Sum_probs=198.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... .......+.+|+.++++++|+||+++++++.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------- 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------- 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--------
Confidence 589999999999999999999999999999999875433 22335678999999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+++|||++ ++|..++.. ...+++.+++.++.||+.||.|
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (267)
T cd08224 74 --------------------------------NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 356799999997 589888753 3458999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~ 185 (267)
T cd08224 122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC---------------cccceecCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999987543211 01123468899999999887 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|||||||++|+|++ ||.... .......... .+..++.. ...+..+.++|.+||..+|++|||+.+|++
T Consensus 186 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 664332 1111222222 22233222 245668999999999999999999999986
No 281
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=9.2e-34 Score=318.98 Aligned_cols=255 Identities=29% Similarity=0.444 Sum_probs=199.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccccCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
|++.+.||.|+||.||+|.++.+|+.||+|.++...........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~----- 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT----- 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC-----
Confidence 6789999999999999999998899999999976544333345677788877666 59999999999854310
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....+|++|||++++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 76 ------------------------------~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 76 ------------------------------DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125 (287)
T ss_pred ------------------------------CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1124589999999999998887643 48999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
++++|+||||+||+++.++.+||+|||++..+.... ......+++.|+|||++.+ ..++.++|
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~D 188 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM----------------ALTSVVVTLWYRAPEVLLQ-SSYATPVD 188 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCCc----------------ccccccccccccChHHhcc-CCCCCcch
Confidence 999999999999999999999999999997653211 0122357899999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------CCCC--------ccccCCHHHHHHHHHcc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELPP--------SWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p~--------~~~~~~~e~~~LI~~~L 644 (1170)
||||||++|||++ ||......+....+..... ..+. .....++.+.++|.+||
T Consensus 189 i~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 189 MWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred hhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 9999999999997 6655444333322221100 0000 01123457789999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.||.+||++.++++|+||
T Consensus 269 ~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccCCccCCCHHHHhcCcCC
Confidence 9999999999999999996
No 282
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=6e-34 Score=320.17 Aligned_cols=253 Identities=29% Similarity=0.445 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--------- 73 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE---------
Confidence 457788999999999999999998999999999875432 3445678999999999999999999998743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+||||+++ +|.+++.. +.+++..+..++.|++.||+|||+++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 74 -------------------------------GTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4578999999975 88888764 56899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~ 185 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIQQ-SAYDSKADIW 185 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc---------------cccccccCcccccCHhHhcc-CCCccHHHHH
Confidence 9999999999999999999999999997542211 01123468889999999887 4689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||++|||++ ||............ .....+......+..+.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 186 SLGITAIELAKGEPPNSDMHPMRVLFLI--PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHHHHHHHCCCCCCCcChHhHhhhh--hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 99999999997 66544433322221 12222333334556889999999999999999999999999987664
No 283
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.3e-34 Score=319.67 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=194.6
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhh-HHHHHHHH---HHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREV---ATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~-~~~~~~Ev---~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
.||+|+||.||+|.+..+|+.||+|++......... ...+..|. ..++...||||+++++++.+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT------------ 68 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec------------
Confidence 489999999999999989999999998754322111 12233443 34444589999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
...+|+||||++ ++|.+++...+.+++..++.++.|++.||+|||+++|+|
T Consensus 69 ----------------------------~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 69 ----------------------------PDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred ----------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 457899999996 589888887788999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+||+++.++.+||+|||++...... ......|+..|+|||++.+...++.++||||+|
T Consensus 121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred CCCCHHHEEECCCCCEEEccCcCccccCcc-----------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 999999999999999999999998754211 012347899999999987644689999999999
Q ss_pred HHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCC
Q 001059 597 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 665 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~ 665 (1170)
|++|+|++ ||..... ......... ..+..+...++++.+++.+||..+|.+|| ++.++++|+|+..
T Consensus 184 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHHhCCCCCCCCCccchHHHHHHhhc---cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 99999997 7764421 111111111 11222223567999999999999999999 9999999999998
Q ss_pred chHHHH
Q 001059 666 MEYELL 671 (1170)
Q Consensus 666 ~~~~~~ 671 (1170)
..+..+
T Consensus 261 ~~~~~~ 266 (278)
T cd05606 261 LDWQMV 266 (278)
T ss_pred CCchHh
Confidence 775543
No 284
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.8e-33 Score=309.99 Aligned_cols=256 Identities=32% Similarity=0.497 Sum_probs=208.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|...+.||+|++|.||+|.+..+|+.|++|++..........+.+.+|+.++++++||||+++++.+.+.
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE--------- 71 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---------
Confidence 47888999999999999999999999999999976654445567899999999999999999999887331
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....++++|||++ ++|.+++.....+++..++.++.|++.||+|||++|+
T Consensus 72 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 72 -----------------------------EKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred -----------------------------CCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 0257899999995 6999999887789999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||+|+||+++.++.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 188 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-------------EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWS 188 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEeccccccc-------------ccccCCCCCccccCHhhhcC-CCCCchhhHHH
Confidence 99999999999999999999999999865432110 00123468899999999887 45899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+++|+|++ ||............+......+......++.+.++|.+||+.||.+||++.++++|||+
T Consensus 189 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 189 LGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999999997 76655422222222222223333333446789999999999999999999999999996
No 285
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.3e-33 Score=319.40 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=203.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|...+.||.|++|.||++.+..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~---------- 87 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLV---------- 87 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEc----------
Confidence 45556799999999999999998999999999865332 234568899999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|+++||++ ++|.+++.. .++++..++.++.||+.||+|||++|+
T Consensus 88 ------------------------------~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i 136 (285)
T cd06648 88 ------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV 136 (285)
T ss_pred ------------------------------CCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 356799999996 589888876 679999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++||||
T Consensus 137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 200 (285)
T cd06648 137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPEVISR-LPYGTEVDIWS 200 (285)
T ss_pred ecCCCChhhEEEcCCCcEEEcccccchhhccCC---------------cccccccCCccccCHHHhcC-CCCCCcccHHH
Confidence 999999999999999999999999987542110 01123468999999999887 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||++|+|++ ||..........................++.+.++|.+||+.+|.+|||+.++++|+|+....
T Consensus 201 lGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 201 LGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 9999999997 776544433333222221111122223567899999999999999999999999999987754
No 286
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=6.3e-34 Score=337.07 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=195.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|+++. ||||++++++|.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 36788999999999999999997533 3479999986543 2334567999999999996 9999999999832
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 487 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 487 (1170)
...+|+|||||+ |+|.+++...
T Consensus 113 --------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T cd05105 113 --------------------------------------SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIF 154 (400)
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHHhhhhhhcccccccccccccc
Confidence 346799999996 5898877542
Q ss_pred -----------------------------------------------------------------------------CCC
Q 001059 488 -----------------------------------------------------------------------------DHF 490 (1170)
Q Consensus 488 -----------------------------------------------------------------------------~~l 490 (1170)
..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 234 (400)
T cd05105 155 GINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGL 234 (400)
T ss_pred CCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCC
Confidence 236
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+..... ........+
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~ 301 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-------------YVSKGSTFL 301 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------ccccCCcCC
Confidence 7788899999999999999999999999999999999999999999999986432110 011123457
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
++.|+|||++.+ ..++.++|||||||++|||++ ||............+.. +..++.....++++.++|.+||+.
T Consensus 302 ~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS-GYRMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHCcc
Confidence 789999999887 568999999999999999984 66544333333333332 222333345677899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||++||++.++.+.
T Consensus 380 dP~~RPt~~~l~~~ 393 (400)
T cd05105 380 EPEKRPSFLHLSDI 393 (400)
T ss_pred CHhHCcCHHHHHHH
Confidence 99999999998763
No 287
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-33 Score=318.25 Aligned_cols=257 Identities=26% Similarity=0.458 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... .....++.+|+++++.++||||++++++|.+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 71 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDE-------- 71 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc--------
Confidence 478999999999999999999998999999999875433 24456789999999999999999999887432
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|++|||++ ++|.+++.. ...+++..+..++.||+.||+||
T Consensus 72 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l 121 (287)
T cd06621 72 ------------------------------SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121 (287)
T ss_pred ------------------------------CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2346899999997 588877643 34589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+.|++|+||+|+||+++.++.++|+|||++....... .....++..|+|||.+.+ ..++.+
T Consensus 122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----------------~~~~~~~~~y~~pE~~~~-~~~~~~ 183 (287)
T cd06621 122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----------------AGTFTGTSFYMAPERIQG-KPYSIT 183 (287)
T ss_pred HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-----------------cccccCCccccCHHHhcC-CCCCch
Confidence 99999999999999999999999999999987542110 112357889999999887 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchh-----HHHHHHHHhhhcC-CCCCcc---ccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM-----ERQIVLSDLKQKG-ELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~-----~~~~~~~~l~~~~-~~p~~~---~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+|||||||++|+|++ ||.... ..+.......... .++... ...++.+.++|.+||..+|.+|||+.++
T Consensus 184 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ei 263 (287)
T cd06621 184 SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDM 263 (287)
T ss_pred hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHH
Confidence 999999999999997 665431 1111111111011 111111 1234578999999999999999999999
Q ss_pred HhccCCCCchH
Q 001059 658 LQDALPPQMEY 668 (1170)
Q Consensus 658 L~~~~~~~~~~ 668 (1170)
++|+|+.+...
T Consensus 264 l~~~~~~~~~~ 274 (287)
T cd06621 264 LEHPWIKAQMK 274 (287)
T ss_pred HhCcccccccc
Confidence 99999976643
No 288
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8.8e-34 Score=321.36 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC----------------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCce
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG----------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg----------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV 417 (1170)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 368999999999999999999887543 568999987443 234456789999999999999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--------
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------- 488 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------- 488 (1170)
+++++|.. ...++++|||++ ++|.+++....
T Consensus 83 ~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 122 (296)
T cd05051 83 RLLGVCTV----------------------------------------DPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122 (296)
T ss_pred EEEEEEec----------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccc
Confidence 99988732 246799999996 58999887655
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 489 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 489 ---~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
.+++..++.++.|++.||+|||++||+||||||+||+++.++.++|+|||+++....... ....
T Consensus 123 ~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~ 189 (296)
T cd05051 123 NSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-------------YRVQ 189 (296)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc-------------eeec
Confidence 689999999999999999999999999999999999999999999999999975432210 0011
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHHhhh-----cCCCCCccccCCHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDLKQ-----KGELPPSWVAKFSE 635 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~l~~-----~~~~p~~~~~~~~e 635 (1170)
....+++.|+|||++.+ ..++.++|||||||++|||++ ||......+........ .....+.....+++
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (296)
T cd05051 190 GRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD 268 (296)
T ss_pred CcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHH
Confidence 23456789999999887 568999999999999999985 55544333332222111 01111222345578
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 636 QESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 636 ~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.+++.+||+.||.+|||+.++++.
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999999999999999999999864
No 289
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.4e-33 Score=316.32 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=198.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+|+.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 47899999999999999999998744 3789999986433 22344578899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------CCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~e~~~~~ 497 (1170)
....|++|||++ ++|.+++.... .+++..++.
T Consensus 81 -------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 81 -------------------------------------GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 345799999996 69999886432 367889999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.+...... .......+|..|+||
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMAP 190 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc-------------ccCCCCCccccccCH
Confidence 9999999999999999999999999999999999999999999865322110 011234578899999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|.+.+ ..++.++|||||||++|||++ ||......+... ... ....++.....++++.++|.+||+.+|++|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 267 (277)
T cd05032 191 ESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-FVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPT 267 (277)
T ss_pred HHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-HHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence 99876 568999999999999999986 665544443333 222 23333333445779999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.++++.
T Consensus 268 ~~~l~~~ 274 (277)
T cd05032 268 FLEIVSS 274 (277)
T ss_pred HHHHHHH
Confidence 9999863
No 290
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-33 Score=314.50 Aligned_cols=245 Identities=22% Similarity=0.390 Sum_probs=194.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|.+. .+..+|+|.+...... ...+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTK--------- 70 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEcc---------
Confidence 57999999999999999999886 4557999988643322 3568999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 71 -------------------------------QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 235699999996 5899988764 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++|+||||+|||++.++.+||+|||.++...... ........++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--------------~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di 184 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE--------------YTSSVGSKFPVRWSPPEVLLY-SKFSSKSDV 184 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCccceecCCCc--------------eeecCCCccChhhCCHHHHhc-CcccchhHH
Confidence 99999999999999999999999999987542211 001122346678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|+|++ ||.............. ...+......++.+.+++.+||+.||.+||++.+++.+
T Consensus 185 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ--GLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 999999999986 6654444333333322 22222223346789999999999999999999999864
No 291
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-36 Score=311.57 Aligned_cols=273 Identities=24% Similarity=0.413 Sum_probs=212.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..+.|+...+||+|.||+||+|+.+.+|+.||+|++-..+.....-...++|+.+|..++|+|++.+++.|-.-.
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~---- 89 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA---- 89 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc----
Confidence 3346788889999999999999999999999999987554433334456889999999999999999987762210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....+...+|+|+.+|..+|..+|... .+++..++.+++.+++.||.|+|
T Consensus 90 ----------------------------Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH 141 (376)
T KOG0669|consen 90 ----------------------------TPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH 141 (376)
T ss_pred ----------------------------CCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence 0001245678999999999999999866 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++.|+|||+||+|+||+.+|.+||+|||+++.+....... ....+..+-|.+|.+||.+.|...|+++.
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~-----------kprytnrvvTLwYrppEllLG~r~yg~~i 210 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVV-----------KPRYTNRVVTLWYRPPELLLGDREYGPPI 210 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccC-----------CCCcccceeeeecCCHHHhhcccccCCcc
Confidence 9999999999999999999999999999998765433211 11235678899999999999999999999
Q ss_pred hhHHHHHHHHHhhc--CCCchhHHHHHHHHhhh-cCCCC-Cccc-------------------------------cCCHH
Q 001059 591 DMYSLGIVFFELWH--PFSTAMERQIVLSDLKQ-KGELP-PSWV-------------------------------AKFSE 635 (1170)
Q Consensus 591 DIwSlGviL~ELlt--Pf~~~~~~~~~~~~l~~-~~~~p-~~~~-------------------------------~~~~e 635 (1170)
|||..|||+.||++ |.......+..+..+.. -+.+. ..|+ ...++
T Consensus 211 DiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~ 290 (376)
T KOG0669|consen 211 DIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDE 290 (376)
T ss_pred hhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChh
Confidence 99999999999997 54433333322222111 11110 0111 11246
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 636 QESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 636 ~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+.+|+.++|..||.+|+++++++.|.||....
T Consensus 291 a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 291 ALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred HHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 78999999999999999999999999886654
No 292
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.9e-34 Score=323.61 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=193.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||.||+|.++.+|.. +|+|.++.. .+......+.+|+.++.++ +||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----- 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----- 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----
Confidence 47899999999999999999999888765 466665422 2333456788999999999 89999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKE 493 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~ 493 (1170)
...+|++|||++ ++|.+++.... .+++.
T Consensus 80 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (303)
T cd05088 80 -----------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 124 (303)
T ss_pred -----------------------------------CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHH
Confidence 346799999997 58999886532 47899
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++...... .......+++.
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~ 188 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVR 188 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh----------------hhcccCCCccc
Confidence 99999999999999999999999999999999999999999999998632100 00112234678
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|+|||++.+ ..++.++|||||||++|||++ ||......+.... .. ....+......++++.+||.+||+.+|.
T Consensus 189 y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 189 WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred ccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH-Hh-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999877 458899999999999999985 6654443333222 21 1222223334567899999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+||++.+++++
T Consensus 266 ~Rp~~~~il~~ 276 (303)
T cd05088 266 ERPSFAQILVS 276 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999999986
No 293
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.6e-33 Score=318.81 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++. .+..||+|.++... .......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 3689999999999999999998752 35589999876432 23334568899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------CCCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 497 (1170)
....|++|||++ |+|.+++... ..++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05061 81 -------------------------------------GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123 (288)
T ss_pred -------------------------------------CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence 235699999996 6999998653 2246678899
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+..... ........++..|+||
T Consensus 124 ~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~p 190 (288)
T cd05061 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMAP 190 (288)
T ss_pred HHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc-------------ccccCCCcccccccCH
Confidence 999999999999999999999999999999999999999999986432110 0011223467789999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|.+.+ ..++.++|||||||++|||++ ||......+...... .+..+......++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (288)
T cd05061 191 ESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 267 (288)
T ss_pred HHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 99887 568999999999999999985 776554444332222 22222223345678999999999999999999
Q ss_pred HHHHHh------ccCCCCc
Q 001059 654 ATELLQ------DALPPQM 666 (1170)
Q Consensus 654 a~eiL~------~~~~~~~ 666 (1170)
+.++++ ||+|...
T Consensus 268 ~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 268 FLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHhhcCCCCCCC
Confidence 999986 5555543
No 294
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2e-33 Score=309.91 Aligned_cols=250 Identities=34% Similarity=0.582 Sum_probs=207.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||++.+..+++.||+|++............+.+|+++++.++|||++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~---------- 70 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE---------- 70 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec----------
Confidence 5889999999999999999999999999999998765555566788999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+++|||+++ +|.+.+... ..+++..++.++.||+.||.|||
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 71 ------------------------------KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 899988764 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (258)
T cd08215 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---------------DLAKTVVGTPYYLSPELCQN-KPYNYKS 184 (258)
T ss_pred hCCEecccCChHHeEEcCCCcEEECCccceeecccCc---------------ceecceeeeecccChhHhcc-CCCCccc
Confidence 9999999999999999999999999999998653221 01123478999999999877 4588999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+||+|+++|+|++ ||.............. ...++.....+..+.+++.+||..+|.+|||+.++|+|||+
T Consensus 185 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILK--GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999996 6655544333333322 22333333556789999999999999999999999999986
No 295
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.4e-33 Score=317.87 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=195.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||+||+|.+..+|.. +++|.+... ........+..|+..++.++||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~----- 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP----- 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----
Confidence 36899999999999999999999877764 677776432 22233457788899999999999999998762
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....++++||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 80 ------------------------------------~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T cd05111 80 ------------------------------------GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMY 123 (279)
T ss_pred ------------------------------------CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 123578999996 6999999754 56899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|++||||||+|||++.++.+||+|||+++....... ....+...++..|+|||++.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~pE~~~~-~~~~ 189 (279)
T cd05111 124 YLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-------------KYFYSEHKTPIKWMALESILF-GRYT 189 (279)
T ss_pred HHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc-------------ccccCCCCCcccccCHHHhcc-CCcC
Confidence 99999999999999999999999999999999986532110 011123457788999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||........ ...+ ..+..++....++.++.+++.+||..||.+|||+.++++.
T Consensus 190 ~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 190 HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999999986 6655433322 2222 2344433334456788999999999999999999999763
No 296
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.1e-33 Score=313.38 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=198.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||+||+|.++.+ ...||||.++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK------ 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec------
Confidence 6799999999999999999999754 4579999886432 33345678899999999999999999987632
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++|||++ ++|.+++... +.+++..++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 77 ----------------------------------SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5899988654 4689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.+
T Consensus 123 h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~Pe~~~~-~~~~~~ 188 (266)
T cd05033 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA-------------TYTTKGGKIPIRWTAPEAIAY-RKFTSA 188 (266)
T ss_pred HhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc-------------ceeccCCCCCccccChhhhcc-CCCccc
Confidence 999999999999999999999999999999987631110 001112345678999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+||||||+++|+|++ ||......+..... . ....++.....++.+.+++.+||+.+|++||++.+++++
T Consensus 189 ~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 189 SDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV-E-DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999985 67555444333222 2 222223334567899999999999999999999999875
No 297
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.6e-34 Score=321.04 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+.+|++.+.||+|+||.||+|.+..+ ++.||||+++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--- 79 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--- 79 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---
Confidence 35688889999999999999998643 5789999987443 23345678899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
...+++++||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05091 80 -------------------------------------EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122 (283)
T ss_pred -------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence 345789999997 5888887521 2478
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+..++.++.|++.||+|||++||+||||||+|||+++++.+||+|||+++........ .......++
T Consensus 123 ~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~ 189 (283)
T cd05091 123 PADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------KLMGNSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe-------------eeccCccCC
Confidence 8889999999999999999999999999999999999999999999998865322100 011223567
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.. ...++.....++.+.+|+.+||+.+
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05091 190 IRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN--RQVLPCPDDCPAWVYTLMLECWNEF 266 (283)
T ss_pred ccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHhCCC
Confidence 89999999876 568999999999999999986 6665555444333322 2233333456778999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+||++.+|++.
T Consensus 267 p~~RP~~~~i~~~ 279 (283)
T cd05091 267 PSRRPRFKDIHSR 279 (283)
T ss_pred cccCCCHHHHHHH
Confidence 9999999999874
No 298
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.4e-33 Score=313.66 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|+++++||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTK-------- 72 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------
Confidence 478999999999999999999976 667899998764322 34678999999999999999999987622
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH 120 (261)
T cd05072 73 --------------------------------EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 120 (261)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 5999988653 45888999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++++||||||+||+++.++.+||+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 121 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 185 (261)
T cd05072 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 185 (261)
T ss_pred HCCeeccccchhhEEecCCCcEEECCCccceecCCCce--------------eccCCCccceecCCHHHhcc-CCCChhh
Confidence 99999999999999999999999999999986432110 01122346778999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|+|++ ||............ . .....+.....+.++.+++.+||+.+|++||+++++++
T Consensus 186 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-Q-RGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred hhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999996 66554443333322 2 22223333456778999999999999999999999975
No 299
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.6e-33 Score=308.97 Aligned_cols=250 Identities=29% Similarity=0.461 Sum_probs=208.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+.++++++|||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET---------- 70 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe----------
Confidence 5788999999999999999999899999999998665544556789999999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|++|||+++ +|.+++.....+++..++.++.|++.||.|||++||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 71 ------------------------------SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 3568999999975 899999888889999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||||
T Consensus 121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~ 184 (254)
T cd06627 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSK---------------DDASVVGTPYWMAPEVIEM-SGASTASDIWS 184 (254)
T ss_pred ccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------cccccccchhhcCHhhhcC-CCCCcchhHHH
Confidence 9999999999999999999999999986532210 0123468899999999887 44889999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|+++|+|++ ||............. ....+......++.+.++|.+||+.+|++|||+.+++.|+||
T Consensus 185 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 185 LGCTVIELLTGNPPYYDLNPMAALFRIV--QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHh--ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 9999999997 776555444333332 223333334556789999999999999999999999999986
No 300
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-36 Score=334.52 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=225.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-+.+++.+..||-|+||.|-++........+|+|++++... .....+.+..|-.+|..++.|.||++|-.|
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-------- 489 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-------- 489 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--------
Confidence 36788899999999999999999875555699999987653 344566789999999999999999999766
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.+..++|+.||-| +|.|+..++.++.|++..++.++..+++|++|||
T Consensus 490 --------------------------------rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH 537 (732)
T KOG0614|consen 490 --------------------------------RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH 537 (732)
T ss_pred --------------------------------ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH
Confidence 3568899999999 6799999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||+|||||+|+|++.+|.+||.|||+|+.+.... ..-++||||.|.|||++.. ...+.++
T Consensus 538 ~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----------------KTwTFcGTpEYVAPEIILn-KGHD~av 600 (732)
T KOG0614|consen 538 RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----------------KTWTFCGTPEYVAPEIILN-KGHDRAV 600 (732)
T ss_pred hcCceeccCChhheeeccCCceEEeehhhHHHhccCC----------------ceeeecCCcccccchhhhc-cCcchhh
Confidence 9999999999999999999999999999999875432 2346899999999999987 4579999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|.|||||++|||++ ||...+++..+..+++.-..+ ..+..+...+.+||+++...+|.+|.. +.+|-+|.|
T Consensus 601 DyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 601 DYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 99999999999996 999999888877776643221 122345568899999999999999985 899999999
Q ss_pred CCCchHHHHH
Q 001059 663 PPQMEYELLD 672 (1170)
Q Consensus 663 ~~~~~~~~~~ 672 (1170)
|.+..|+-+.
T Consensus 680 f~gfdweglr 689 (732)
T KOG0614|consen 680 FEGFDWEGLR 689 (732)
T ss_pred hhcCChhhhh
Confidence 9999987553
No 301
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-33 Score=317.29 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=191.8
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y-~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++| ++++.||+|+||+||++.. ..++..||+|.++... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 344 8899999999999988753 3568899999987542 223456788999999999999999999887432
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++ ++|.+++.. ..+++.+++.++.|++.||+|
T Consensus 79 -----------------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~ 122 (283)
T cd05080 79 -----------------------------------GGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAY 122 (283)
T ss_pred -----------------------------------CCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 2346899999997 588888865 459999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++........ ........++..|+|||++.+ ..++.
T Consensus 123 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~PE~~~~-~~~~~ 189 (283)
T cd05080 123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY------------YRVREDGDSPVFWYAVECLKE-NKFSY 189 (283)
T ss_pred HHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh------------hccCCCCCCCceeeCHhHhcc-cCCCc
Confidence 99999999999999999999999999999999865321100 000122345678999999886 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHH-H------------HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQ-I------------VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~-~------------~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
++|||||||++|||++ ||....... . ...........++.....++++.+++.+||+.+|++||
T Consensus 190 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 269 (283)
T cd05080 190 ASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRP 269 (283)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence 9999999999999997 553221100 0 00000111122222344567999999999999999999
Q ss_pred CHHHHHh
Q 001059 653 SATELLQ 659 (1170)
Q Consensus 653 ta~eiL~ 659 (1170)
|++++++
T Consensus 270 s~~~i~~ 276 (283)
T cd05080 270 TFRSLIP 276 (283)
T ss_pred CHHHHHH
Confidence 9999986
No 302
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.1e-33 Score=315.81 Aligned_cols=252 Identities=29% Similarity=0.453 Sum_probs=203.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
-|++.+.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.++||||++++++|..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 73 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK---------- 73 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe----------
Confidence 47788999999999999999998999999999865432 2345678899999999999999999998743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
..++|+||||+++ +|.+++.. ..+++..+..++.|++.|+.|||++|+
T Consensus 74 ------------------------------~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 74 ------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred ------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 4568999999975 78877754 468999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||||+||+++.++.++|+|||++..+.... .......|+..|+|||.+.+ ...+.++|+||
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~s 186 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWS 186 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccch---------------hhhccccCCccccChhhhcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 01123468899999999876 56788999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||++|+|++ ||...........+. ....+......+.++.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 187 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 187 LGITAIELAKGEPPHSELHPMKVLFLIP--KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHHHHHHcCCCCCCccchHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 9999999997 665444333322221 2222222334567899999999999999999999999999987654
No 303
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.4e-33 Score=313.19 Aligned_cols=245 Identities=24% Similarity=0.405 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||+|+||.||+|.++ ++..+|+|++...... ...+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTK--------- 70 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcC---------
Confidence 57889999999999999999987 5678999998643332 3468889999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 119 (256)
T cd05059 71 -------------------------------QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119 (256)
T ss_pred -------------------------------CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999996 5899988753 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di 184 (256)
T cd05059 120 GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--------------TSSQGTKFPVKWAPPEVFDY-SRFSSKSDV 184 (256)
T ss_pred CcccccccHhhEEECCCCcEEECCcccceecccccc--------------cccCCCCCCccccCHHHhcc-CCCCchhhH
Confidence 999999999999999999999999999875432110 00111234568999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|+|++ ||......+...... ....++.....++++.+++.+||+.+|.+|||+.++++.
T Consensus 185 ~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 185 WSFGVLMWEVFSEGKMPYERFSNSEVVESVS--AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 999999999986 665544443333222 222222334467799999999999999999999999874
No 304
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.4e-33 Score=322.13 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|+..+.||+|+||.||+|++..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 96 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-------- 96 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--------
Confidence 457888999999999999999998999999999875432 33344678899999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++|||++|+|.+.+.. ...+++..+..++.||+.||.|||++
T Consensus 97 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~ 144 (317)
T cd06635 97 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 144 (317)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999999988887754 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 205 (317)
T cd06635 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 205 (317)
T ss_pred CcccCCCCcccEEECCCCCEEEecCCCccccCC-------------------cccccCCccccChhhhhcCCCCCCCccc
Confidence 999999999999999999999999999864321 123468899999998742 24588999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|||++ ||.............. ....+......++.+.++|.+||+.+|.+||++.++++|+|+...
T Consensus 206 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh-ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 99999999999996 6665544443333332 222222233456789999999999999999999999999987554
No 305
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.1e-33 Score=310.33 Aligned_cols=247 Identities=30% Similarity=0.554 Sum_probs=205.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||++.++.+|+.||+|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD---------- 70 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc----------
Confidence 5889999999999999999999999999999998655554556678899999999999999999877632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||+++ +|.+++.. ...+++..++.++.|++.||+|||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 71 ------------------------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred ------------------------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 89888865 356899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||+|+||+++.++.+||+|||++...... ......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------~~~~~~~~~~~~~Pe~~~~-~~~~~~~ 182 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------MAKTQIGTPHYMAPEVWKG-RPYSYKS 182 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------CcccccCCccccCHHHHCC-CCCCchh
Confidence 999999999999999999999999999999865321 0122468899999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+||||+++|+|++ ||......+...... ....++.....+.++.++|.+||+.+|++||++.++++||+
T Consensus 183 D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 183 DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ--RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 99999999999986 776554443333222 33334333456678999999999999999999999999986
No 306
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.5e-33 Score=319.18 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||++.++.. ...+|+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 36889999999999999999998743 3789999987432 333446788999999999 89999999988732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCC
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 490 (1170)
...+|++|||++ ++|..++... ..+
T Consensus 88 --------------------------------------~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 129 (293)
T cd05053 88 --------------------------------------EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETL 129 (293)
T ss_pred --------------------------------------CCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccccccc
Confidence 345799999996 5999888542 358
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+...... .......+
T Consensus 130 ~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~~ 196 (293)
T cd05053 130 TQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------RKTTNGRL 196 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-------------eccCCCCC
Confidence 89999999999999999999999999999999999999999999999999865322110 01122245
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
+..|+|||++.+ ..++.++|||||||++|||++ ||......+.. ..+. ....+......++++.+|+.+||..
T Consensus 197 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 273 (293)
T cd05053 197 PVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGYRMEKPQNCTQELYHLMRDCWHE 273 (293)
T ss_pred CccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-HHHH-cCCcCCCCCCCCHHHHHHHHHHccc
Confidence 678999999877 568999999999999999985 66544333322 2222 2223333445677899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||.+|||+.+++++
T Consensus 274 ~p~~Rps~~eil~~ 287 (293)
T cd05053 274 VPSQRPTFKQLVED 287 (293)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999975
No 307
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1e-33 Score=314.70 Aligned_cols=248 Identities=27% Similarity=0.432 Sum_probs=196.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||.|+||.||+|.+..+|+.||+|+++..... ......+..|..+ ....+||||++++++|.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 68 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS------------- 68 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-------------
Confidence 5699999999999999999999999998644321 1222334455444 445589999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||++|++||
T Consensus 69 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~ 121 (260)
T cd05611 69 ---------------------------KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121 (260)
T ss_pred ---------------------------CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 357899999996 5999999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||+|+||+++.++.+||+|||++..... .....|++.|+|||.+.+ ..++.++||||||+
T Consensus 122 dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~ 181 (260)
T cd05611 122 DIKPENLLIDQTGHLKLTDFGLSRNGLE-------------------NKKFVGTPDYLAPETILG-VGDDKMSDWWSLGC 181 (260)
T ss_pred CCCHHHeEECCCCcEEEeecccceeccc-------------------cccCCCCcCccChhhhcC-CCCcchhhhHHHHH
Confidence 9999999999999999999999875321 123468889999999987 45899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEY 668 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~ 668 (1170)
++|+|++ ||...................+. .....++++.++|.+||+.||++|| ++++++.|||+....+
T Consensus 182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 9999996 77655554443333222222232 2224677999999999999999999 5579999999977654
No 308
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.9e-34 Score=317.28 Aligned_cols=246 Identities=21% Similarity=0.353 Sum_probs=193.9
Q ss_pred ccCCceEEeee--ccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPL--GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~L--G~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+.++|++.+.+ |.|+||.||++.++.+|..+|+|.+....... .|+.....+ +||||++++++|..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~---- 80 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT---- 80 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec----
Confidence 44667777766 99999999999999999999999987543221 122222222 79999999988743
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+||||++ ++|.+++.....+++.+++.++.||+.||.|
T Consensus 81 ------------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~ 124 (267)
T PHA03390 81 ------------------------------------LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALND 124 (267)
T ss_pred ------------------------------------CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 347899999996 5999999887789999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||+.|++||||||+||+++.++ .++|+|||++..... .....|++.|+|||++.+ ..++
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~-~~~~ 184 (267)
T PHA03390 125 LHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-------------------PSCYDGTLDYFSPEKIKG-HNYD 184 (267)
T ss_pred HHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-------------------CccCCCCCcccChhhhcC-CCCC
Confidence 9999999999999999999988 999999999875421 122468899999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHccCCCCCCCCC-HHHHHhccC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQDAL 662 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-a~eiL~~~~ 662 (1170)
.++|||||||++|+|++ ||............+... ...++.+...++.+.+||.+||+.+|.+||+ ++++|+|+|
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 99999999999999997 776433322211111111 1222333457789999999999999999996 699999999
Q ss_pred CCC
Q 001059 663 PPQ 665 (1170)
Q Consensus 663 ~~~ 665 (1170)
+.+
T Consensus 265 ~~~ 267 (267)
T PHA03390 265 LKI 267 (267)
T ss_pred ccC
Confidence 863
No 309
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.3e-33 Score=311.46 Aligned_cols=243 Identities=26% Similarity=0.364 Sum_probs=192.5
Q ss_pred eeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
++||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+.||||+++++++.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK------------- 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-------------
Confidence 46999999999999886554 78999998754433 44567899999999999999999998752
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
....+++|||++ ++|.+++.....+++..++.++.|++.||+|||+++++|
T Consensus 67 ----------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 67 ----------------------------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred ----------------------------CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 234689999996 599999988778999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||||
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG 185 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------------YRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYG 185 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccceeecCCcc------------cccccCccccccccCHHHhcC-CCCCccchHHHHH
Confidence 999999999999999999999999865322100 001112235578999999877 5689999999999
Q ss_pred HHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 597 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 597 viL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++|+|++ ||......+.... +. .....+.....++.+.++|.+||+.+|.+||++.++++.
T Consensus 186 ~~l~~~~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 186 VTLWEAFSYGAKPYGEMKGAEVIAM-LE-SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred HHHHHHHcCCCCCcccCCHHHHHHH-HH-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999985 6655444333322 22 222223334566789999999999999999999999863
No 310
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.1e-33 Score=317.82 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=196.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|.+.+.||.|+||+||++.+. .++..+|+|.+... .......+.+|+.++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 57899999999999999999863 34567999988642 33445678999999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------------CCCHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------HFDKELA 495 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------~l~e~~~ 495 (1170)
...+|++|||++ ++|.+++.... .+++..+
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 122 (288)
T cd05093 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122 (288)
T ss_pred ------------------------------------CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHH
Confidence 346799999997 58998886433 3899999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCC
Q 001059 496 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 575 (1170)
Q Consensus 496 ~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 575 (1170)
+.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........+++.|+
T Consensus 123 ~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~ 189 (288)
T cd05093 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 189 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce-------------eecCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999985422110 01112345678999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 576 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 576 APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
|||++.+ ..++.++|||||||++|+|++ ||...........+. .+..+......++++.+|+.+||+.||.+|
T Consensus 190 aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 266 (288)
T cd05093 190 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT--QGRVLQRPRTCPKEVYDLMLGCWQREPHMR 266 (288)
T ss_pred CHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999987 568999999999999999986 565544444333332 222233333466799999999999999999
Q ss_pred CCHHHHHh
Q 001059 652 PSATELLQ 659 (1170)
Q Consensus 652 Pta~eiL~ 659 (1170)
||+.++++
T Consensus 267 pt~~~v~~ 274 (288)
T cd05093 267 LNIKEIHS 274 (288)
T ss_pred CCHHHHHH
Confidence 99999975
No 311
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-33 Score=316.28 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 3679999999999999999999986 6788999987643 223334578999999999999999999988743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------CCCHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 500 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 500 (1170)
....|++|||++ ++|.+++.... .+++..+..++.
T Consensus 81 -------------------------------------~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05036 81 -------------------------------------RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 234689999996 59999886543 488999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
||+.||+|||+++++||||||+|||++.++ .+||+|||+++.+...... ........++.|+||
T Consensus 124 qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05036 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY-------------RKGGRAMLPIKWMPP 190 (277)
T ss_pred HHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccce-------------ecCCCCCccHhhCCH
Confidence 999999999999999999999999998754 5999999999865221100 001122345689999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|||++ ||.............. . ..+......++.+.+++.+||+.+|++||+
T Consensus 191 E~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps 267 (277)
T cd05036 191 EAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-G-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN 267 (277)
T ss_pred HHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-C-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99987 568999999999999999985 7765544433322221 1 122223455678999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.++++|
T Consensus 268 ~~~vl~~ 274 (277)
T cd05036 268 FATILER 274 (277)
T ss_pred HHHHHHH
Confidence 9999987
No 312
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.5e-33 Score=319.99 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=194.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC--------------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEE
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG--------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg--------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~ 420 (1170)
++|++.+.||+|+||.||+|++..++ ..||+|.++.. ........+.+|+.++++++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 58999999999999999999876432 35899998643 3334456789999999999999999999
Q ss_pred EEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-----------
Q 001059 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------- 488 (1170)
Q Consensus 421 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------- 488 (1170)
+++.. ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 84 GVCVS----------------------------------------DDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred EEEcC----------------------------------------CCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 88732 345799999997 58998885432
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcc
Q 001059 489 -HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567 (1170)
Q Consensus 489 -~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1170)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++........ ......
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~ 190 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-------------YRIQGR 190 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-------------eeccCc
Confidence 367888999999999999999999999999999999999999999999999975421110 011122
Q ss_pred cccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHHh---hh--cCCCCCccccCCHHHH
Q 001059 568 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQE 637 (1170)
Q Consensus 568 ~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~e~~ 637 (1170)
..+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+...... .. ...........++.+.
T Consensus 191 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (295)
T cd05097 191 AVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF 269 (295)
T ss_pred CcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence 356789999999877 568999999999999999985 776544433322211 11 1111222334567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHhc
Q 001059 638 SLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+||.+||+.||.+||++++|++.
T Consensus 270 ~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 270 KLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999999999999863
No 313
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=9.8e-34 Score=329.26 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+|.++ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 57999999999999999999853 467899999997443 233456788999999999 789999999887432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...++++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T cd05103 84 -------------------------------------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSG 126 (343)
T ss_pred -------------------------------------CCceEEEEeccCCCcHHHHHHhcCCcccccccccccccccccc
Confidence 345789999997 5898887542
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 488 -----------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 488 -----------------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
..++...+..++.||+.||+|||++||+|||||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 206 (343)
T cd05103 127 YGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA 206 (343)
T ss_pred ccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCc
Confidence 136777888999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+|||++.++.+||+|||+++....... ........+++.|+|||++.+ ..++.++|||||||++|
T Consensus 207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 207 ARNILLSENNVVKICDFGLARDIYKDPD-------------YVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 272 (343)
T ss_pred cCeEEEcCCCcEEEEecccccccccCcc-------------hhhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH
Confidence 9999999999999999999986421110 001112346678999999877 56899999999999999
Q ss_pred Hhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 601 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 601 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|++ ||............+. .+..++.....++++.+++.+||+.||.+|||+.++++|
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9985 6654332222222222 222222223356789999999999999999999999986
No 314
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.7e-33 Score=318.19 Aligned_cols=258 Identities=28% Similarity=0.419 Sum_probs=202.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||.|+||.||+|.+..+|+.||||.++..... .....+.+|+.++... .||||+++++++.+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------- 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFIT------- 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeec-------
Confidence 57899999999999999999999988999999999754332 2345677788777666 49999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||+++++.+++.. ...+++..+..++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 86 ---------------------------------DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred ---------------------------------CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999888777755 4568999999999999999999997
Q ss_pred -CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CCCC
Q 001059 512 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKID 587 (1170)
Q Consensus 512 -~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~ 587 (1170)
+||+||||+|+||+++.++.+||+|||++..+.... ......+++.|+|||.+.+. +.++
T Consensus 133 ~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 196 (296)
T cd06618 133 KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------------AKTRSAGCAAYMAPERIDPPDPNPKYD 196 (296)
T ss_pred hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC----------------cccCCCCCccccCHhhcCCCCCccccc
Confidence 599999999999999999999999999987643211 01223578899999998763 2378
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHH-HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++||||||+++|+|++ ||...... +.............+.....+.++.+||.+||+.||.+||++.++++|+|+
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 89999999999999997 76543222 222222222211112222456789999999999999999999999999998
Q ss_pred CCchH
Q 001059 664 PQMEY 668 (1170)
Q Consensus 664 ~~~~~ 668 (1170)
.....
T Consensus 277 ~~~~~ 281 (296)
T cd06618 277 RRYET 281 (296)
T ss_pred hccch
Confidence 77543
No 315
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.4e-34 Score=321.09 Aligned_cols=252 Identities=28% Similarity=0.439 Sum_probs=201.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+..+.||+|+||.||+|.+..+|..||+|.++.... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 72 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYL---------- 72 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccc----------
Confidence 356777899999999999999998999999999875433 234567899999999999999999998763
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 73 ------------------------------~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 73 ------------------------------KGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred ------------------------------cCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 23568999999975 88887754 56899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||+|+||+++.++.++|+|||++..+.... .......|+..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 185 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDFKADIW 185 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc---------------hhhhcccCcccccCHHHhCc-CCCchhhhHH
Confidence 9999999999999999999999999997653211 01123468899999999987 5688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|||++ ||............ . ....+......+.++.++|.+||+.+|++||++.++++|+|+...
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 186 SLGITAIELAKGEPPNSDLHPMRVLFLI-P-KNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHhhh-h-cCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 99999999997 55433332222211 1 122222223455688999999999999999999999999987654
No 316
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2e-33 Score=319.52 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||.||+|.++.+|. .+++|.++. .......+.+.+|+.+++++ +||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACEN------ 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc------
Confidence 689999999999999999999987765 468887763 22333456789999999999 79999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKEL 494 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~ 494 (1170)
...+|++|||++ ++|.+++.... .+++..
T Consensus 75 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 120 (297)
T cd05089 75 ----------------------------------RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120 (297)
T ss_pred ----------------------------------CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHH
Confidence 345799999997 59999886532 478899
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 001059 495 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 574 (1170)
++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ........+..|
T Consensus 121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~y 184 (297)
T cd05089 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------VKKTMGRLPVRW 184 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce----------------eccCCCCcCccc
Confidence 9999999999999999999999999999999999999999999998642110 001112335679
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+|||++.+ ..++.++|||||||++|||++ ||......+....... +..++.....++.+.+||.+||+.+|.+
T Consensus 185 ~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~ 261 (297)
T cd05089 185 MAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRMEKPRNCDDEVYELMRQCWRDRPYE 261 (297)
T ss_pred cCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 99999877 568999999999999999985 7765555444333322 2222233346678999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||++++++.
T Consensus 262 Rp~~~~i~~~ 271 (297)
T cd05089 262 RPPFAQISVQ 271 (297)
T ss_pred CcCHHHHHHH
Confidence 9999999875
No 317
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.6e-33 Score=316.78 Aligned_cols=248 Identities=29% Similarity=0.408 Sum_probs=197.6
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+|+.++||||+++++++..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------------- 64 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET---------------- 64 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec----------------
Confidence 69999999999999999999999998754322 2234456789999999999999999987732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...+|++|||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 120 (277)
T cd05577 65 ------------------------KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120 (277)
T ss_pred ------------------------CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 356899999997 59999887655 699999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+||+++.++.+||+|||++....... ......++..|+|||++.+ ..++.++|||||||+
T Consensus 121 i~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 183 (277)
T cd05577 121 LKPENVLLDDHGNVRISDLGLAVELKGGK----------------KIKGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCT 183 (277)
T ss_pred CCHHHEEECCCCCEEEccCcchhhhccCC----------------ccccccCCCCcCCHHHhcC-CCCCchhhhHHHHHH
Confidence 99999999999999999999987643210 1123467889999999887 458999999999999
Q ss_pred HHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCch
Q 001059 599 FFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQME 667 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~ 667 (1170)
+|+|++ ||..... ......... ..........++++.++|++||+.||.+|| ++.++++|||+....
T Consensus 184 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 184 LYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 999996 7754332 111111111 111122234567899999999999999999 899999999998776
Q ss_pred HH
Q 001059 668 YE 669 (1170)
Q Consensus 668 ~~ 669 (1170)
+.
T Consensus 262 ~~ 263 (277)
T cd05577 262 WR 263 (277)
T ss_pred hh
Confidence 54
No 318
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.5e-33 Score=315.87 Aligned_cols=265 Identities=28% Similarity=0.436 Sum_probs=208.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~ 432 (1170)
++|.+.+.||.|+||.||+|.++.+|+.||+|++..... .......+.+|+.++++++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 479999999999999999999999999999999875332 2334467889999999998 999999987652
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....+|++|||+ +++|.+++.....+++..++.++.|++.||.|||+
T Consensus 73 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 73 --------------------------------DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred --------------------------------CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235689999999 57999999988889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCC-----CCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-----PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|++|+||||+||+++.++.++|+|||++.............. ...............|+..|+|||++.+ ..+
T Consensus 121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~ 199 (280)
T cd05581 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPA 199 (280)
T ss_pred CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCC
Confidence 9999999999999999999999999999987643221100000 0000000112234568899999999887 458
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHh
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~ 659 (1170)
+.++||||||+++|++++ ||..................+|. ..++.+.++|.+||+.+|.+||++ .++++
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 899999999999999997 66655443333333322333333 336789999999999999999999 99999
Q ss_pred ccCC
Q 001059 660 DALP 663 (1170)
Q Consensus 660 ~~~~ 663 (1170)
|+||
T Consensus 277 ~~~~ 280 (280)
T cd05581 277 HPFF 280 (280)
T ss_pred CCCC
Confidence 9997
No 319
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.6e-33 Score=311.84 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=189.8
Q ss_pred eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--------------- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--------------- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------------
Confidence 4899999999999875 345679999986442 3344567899999999999999999998761
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+++||||++ ++|.+++.. ...+++..++.++.||+.||+|||++|++||
T Consensus 66 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 119 (257)
T cd05115 66 --------------------------AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHR 119 (257)
T ss_pred --------------------------CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeec
Confidence 234689999997 589988874 4569999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||++........ .....+...+++.|+|||++.+ ..++.++|||||||
T Consensus 120 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ 186 (257)
T cd05115 120 DLAARNVLLVNQHYAKISDFGLSKALGADDS------------YYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGI 186 (257)
T ss_pred ccchheEEEcCCCcEEeccCCccccccCCcc------------ceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHH
Confidence 9999999999999999999999975432110 0011122334678999999886 56899999999999
Q ss_pred HHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 598 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 598 iL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||++ ||.......... .+. .+..+......++++.++|.+||+.||++||++.++.+.
T Consensus 187 ~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 187 TMWEAFSYGQKPYKKMKGPEVMS-FIE-QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred HHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999984 776554444332 222 222333334567899999999999999999999999764
No 320
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-35 Score=364.46 Aligned_cols=253 Identities=31% Similarity=0.449 Sum_probs=208.9
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
...||.|.||.||-|.+..+|...|+|-|+...........+.+|..+|..++|||+|+|||+=.
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv--------------- 1304 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV--------------- 1304 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee---------------
Confidence 46799999999999999999999999999876655555667889999999999999999997632
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....++|.||||. |+|.+++...+..++.....|..|++.|++|||++||||||
T Consensus 1305 -------------------------HRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRD 1359 (1509)
T KOG4645|consen 1305 -------------------------HREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRD 1359 (1509)
T ss_pred -------------------------cHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 3456789999996 69999998888889999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CCCccchhHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYSLG 596 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDIwSlG 596 (1170)
|||+|||++.+|.+|++|||.|..+..+.. +....-.+.+|||.|||||++.+.. ....++||||+|
T Consensus 1360 IK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~-----------~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1360 IKPANILLDFNGLIKYGDFGSAVKIKNNAQ-----------TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred CCccceeeecCCcEEeecccceeEecCchh-----------cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence 999999999999999999999997754310 1111234679999999999998732 256799999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|+..||+| ||...+..=..+..+. -+..|+.+...+++-++||.+||..||++|.++.|++.|.|-+
T Consensus 1429 CVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred ceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 99999998 7766554433333332 3444555555788999999999999999999999999997644
No 321
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.4e-33 Score=305.60 Aligned_cols=248 Identities=30% Similarity=0.546 Sum_probs=201.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+..+.||.|++|.||++.+..+|+.+++|++..... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 68 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK---------- 68 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec----------
Confidence 58889999999999999999998999999999875433 345688999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....++++||++ ++|.+++... ..+++..++.++.|++.||+|||++|
T Consensus 69 ------------------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 69 ------------------------------KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 246799999998 5999988775 57999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.++|+|||++........ .....|+..|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~ 181 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----------------RNTMVGTPYWMAPEVING-KPYDYKADIW 181 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc----------------ccceecCCcccCHHHHcC-CCCCccccHH
Confidence 99999999999999999999999999986532210 123468899999999987 4588999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|||+++|+|++ ||....................+.....+..+.++|.+||+.||.+|||+.++++|||
T Consensus 182 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999999997 6665433333222222111111111222578999999999999999999999999997
No 322
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.1e-33 Score=317.15 Aligned_cols=255 Identities=25% Similarity=0.452 Sum_probs=208.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+.|+..+.||.|+||.||+|.+..++..||+|++..... ....+.+|+..++.++||||+++++++..
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 86 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV-------- 86 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--------
Confidence 3578888999999999999999998999999999975433 45678899999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|+++||++ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 134 (286)
T cd06614 87 --------------------------------GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS 134 (286)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999998 69999998776 89999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++|+||||+||+++.++.++|+|||++........ ......+++.|+|||++.+ ..++.++|
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~D 198 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---------------KRNSVVGTPYWMAPEVIKR-KDYGPKVD 198 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh---------------hhccccCCcccCCHhHhcC-CCCCCccc
Confidence 9999999999999999999999999999875432110 1123457889999999887 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+|||||++|+|++ ||...........+..............+.++.++|++||+.+|.+||++.++++|+|+.+.+
T Consensus 199 v~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 199 IWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 9999999999997 666554443333322211111112223567899999999999999999999999999998854
No 323
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.9e-33 Score=309.37 Aligned_cols=243 Identities=25% Similarity=0.348 Sum_probs=198.1
Q ss_pred eeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||+|.+... +..||+|.++...... ....+.+|+..++.++||||+++++++..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------------ 67 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE------------ 67 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC------------
Confidence 4699999999999999866 8999999997544332 45788999999999999999999987732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHH
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++++|||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 68 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 68 ----------------------------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred ----------------------------CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 356799999995 6999999875 67999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|++||||||+||+++.++.+||+|||.+........ ........+++.|+|||.+.+ ..++
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 185 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-------------YRKKTGGKLPIRWMAPESLKD-GIFT 185 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc-------------cccccCCCcCccccCHHHhcc-CCcc
Confidence 99999999999999999999999999999999986532210 011234567899999999887 4689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|+|++ ||......+....... ...+......++++.+++.+||+.+|.+|||+.+++++
T Consensus 186 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 186 SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred hhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999999999985 6665544443333322 22333334557899999999999999999999999875
No 324
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.6e-33 Score=316.13 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=201.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|+..+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----------- 69 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT----------- 69 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----------
Confidence 567889999999999999999999999999998654334445678899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
...+|++|||++++|.+++... ..+++..++.++.|++.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (282)
T cd07829 70 -----------------------------ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120 (282)
T ss_pred -----------------------------CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3568999999999999999876 5799999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||+|+||+++.++.+||+|||+++...... .......++..|+|||.+.+...++.++|||||
T Consensus 121 H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~sl 185 (282)
T cd07829 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPL---------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSV 185 (282)
T ss_pred cCCCChheEEEcCCCCEEEecCCcccccCCCc---------------cccCccccCcCcCChHHhcCCcCCCccccHHHH
Confidence 99999999999999999999999998643211 011234567889999998774478999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhh------------------cCCCC--------CccccCCHHHHHHHHHccCC
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP--------PSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~------------------~~~~p--------~~~~~~~~e~~~LI~~~L~~ 646 (1170)
||++|||++ ||...........+... ....+ ......++.+.++|++||..
T Consensus 186 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 265 (282)
T cd07829 186 GCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQY 265 (282)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhcc
Confidence 999999997 56544332222211110 00000 11123356789999999999
Q ss_pred CCCCCCCHHHHHhccCC
Q 001059 647 SPSDRPSATELLQDALP 663 (1170)
Q Consensus 647 dP~~RPta~eiL~~~~~ 663 (1170)
||.+||++.+++.||||
T Consensus 266 ~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 266 NPAKRISAKEALKHPYF 282 (282)
T ss_pred CcccCCCHHHHhhCcCC
Confidence 99999999999999997
No 325
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.2e-33 Score=316.75 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=195.0
Q ss_pred CceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-|++++.||+|+||.||+|++ +.++..||+|.++... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 468899999999999999985 4568899999986432 334456789999999999999999999887431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|++|||++ ++|.+++.+. ..+++..++.++.||+.||+||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l 125 (284)
T cd05079 79 ---------------------------------GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL 125 (284)
T ss_pred ---------------------------------CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1345799999996 5899988654 3589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.+||+|||+++.+...... ........++..|+|||++.+ ..++.+
T Consensus 126 H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~apE~~~~-~~~~~~ 192 (284)
T cd05079 126 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY------------YTVKDDLDSPVFWYAPECLIQ-SKFYIA 192 (284)
T ss_pred HHCCeeecccchheEEEcCCCCEEECCCccccccccCccc------------eeecCCCCCCccccCHHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865321100 001123457788999999877 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchh--------------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM--------------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~--------------~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
+|||||||++|||++ |+.... .......... .+...+.+...++.+.+||.+||+.||.+||
T Consensus 193 ~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE-EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH-cCccCCCCCCCCHHHHHHHHHHccCCcccCc
Confidence 999999999999986 221110 0011111111 2223333455678999999999999999999
Q ss_pred CHHHHHhc
Q 001059 653 SATELLQD 660 (1170)
Q Consensus 653 ta~eiL~~ 660 (1170)
|+.+++++
T Consensus 272 t~~~il~~ 279 (284)
T cd05079 272 TFQNLIEG 279 (284)
T ss_pred CHHHHHHH
Confidence 99999875
No 326
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.6e-33 Score=316.38 Aligned_cols=252 Identities=27% Similarity=0.459 Sum_probs=202.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.+.||.|++|.||+|.+..+|+.+|+|.++...........+.+|+.+|+.++||||+++++.+.
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------------ 68 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR------------ 68 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc------------
Confidence 56788999999999999999989999999998765544445567889999999999999999987762
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....+|++|||++++|.+.+... ..+++..++.++.||+.||.|||++||+
T Consensus 69 ----------------------------~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (283)
T cd05118 69 ----------------------------HKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120 (283)
T ss_pred ----------------------------cCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 23568999999999998888764 5799999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
|+||||+||+++.++.+||+|||.+....... .......++..|+|||.+.+...++.++|||||
T Consensus 121 H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~sl 185 (283)
T cd05118 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPV---------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSV 185 (283)
T ss_pred ecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---------------ccccCccCcccccCcHHHhcCCCCCchhHHHHH
Confidence 99999999999999999999999997653221 011234688899999998875468999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCC---------------------------CCCccccCCHHHHHHHHHccC
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------LPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
|+++|+|++ ||......+.........+. .+......+.++.++|.+||+
T Consensus 186 G~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 265 (283)
T cd05118 186 GCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLH 265 (283)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhc
Confidence 999999997 56443332222211111000 001122356688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 001059 646 PSPSDRPSATELLQDALP 663 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~ 663 (1170)
.||.+||++.+++.|||+
T Consensus 266 ~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 266 YDPHKRITAEQALAHPYF 283 (283)
T ss_pred cCcccCcCHHHHhhCCCC
Confidence 999999999999999996
No 327
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-33 Score=320.22 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=204.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------- 87 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-------- 87 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeee--------
Confidence 4789999999999999999999998999999999864332 234678899999999999999999987732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+|+||++ ++|.+++.+ ..+++..+..++.|++.||.|||++
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~ 134 (293)
T cd06647 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 134 (293)
T ss_pred --------------------------------CCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346799999996 588888765 3588999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv 198 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCcceecccccc---------------cccccccCChhhcCchhhcc-CCCCchhhH
Confidence 99999999999999999999999999987543211 01123468999999999877 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||++|+|++ ||..........................++.+.++|.+||..+|.+||++.+++.|+||....
T Consensus 199 ~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999999999997 776544333222111111111112233456889999999999999999999999999987654
No 328
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.5e-33 Score=318.09 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=202.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+-|...++||.|+||+||+|++..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 92 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-------- 92 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--------
Confidence 346667889999999999999999999999999875433 22334578899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++||||++++.+.+.. ...+++..++.++.||+.||.|||++
T Consensus 93 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 140 (313)
T cd06633 93 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 140 (313)
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999999998888765 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
|++||||||+||+++.++.+||+|||++.... ......|+..|+|||++.. ...++.++
T Consensus 141 gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~s 201 (313)
T cd06633 141 NMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKV 201 (313)
T ss_pred CeecCCCChhhEEECCCCCEEEeecCCCcccC-------------------CCCCccccccccChhhccccCCCCCCchh
Confidence 99999999999999999999999999986321 0123468899999999852 24588899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|+|++ ||............... ..+. .....+..+++|+.+||+.+|.+||++.++++|+|+...
T Consensus 202 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 202 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 99999999999996 66555443333333221 1221 122345678999999999999999999999999999875
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 280 ~ 280 (313)
T cd06633 280 R 280 (313)
T ss_pred c
Confidence 4
No 329
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.9e-33 Score=311.69 Aligned_cols=256 Identities=32% Similarity=0.494 Sum_probs=203.5
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||.|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ----------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----------------
Confidence 6899999999999998999999999865432 2234567889999999999999999986652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||++|++||||+
T Consensus 64 -----------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 64 -----------------------GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred -----------------------cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 2457899999996 5999999887789999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+||+++.++.++|+|||++.......... ............+++.|+|||.+.+ ..++.++||||||+++|
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~ 192 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQIN-------LNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILY 192 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCcccc-------cccccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHH
Confidence 999999999999999999988643211000 0000112234568899999999887 45889999999999999
Q ss_pred Hhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---HHHHhccCCCCch
Q 001059 601 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALPPQME 667 (1170)
Q Consensus 601 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta---~eiL~~~~~~~~~ 667 (1170)
+|++ ||......+............+ .....++.+.++|++||+.+|.+|||+ .++++|+||....
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 193 EFLVGIPPFHGETPEEIFQNILNGKIEWP-EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred HHHhCCCCCCCCCHHHHHHHHhcCCcCCC-ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 9997 7766555554444333222222 222246789999999999999999999 9999999998654
No 330
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.6e-33 Score=319.38 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=202.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|...+.||.|+||.||+|+++.++..+|+|.+.... .......++.+|+.+++.++|||++++++++..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 86 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 86 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--------
Confidence 45777889999999999999999999999999987532 233344678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+||||+.+++.+.+.. ...+++..+..++.|++.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 134 (308)
T cd06634 87 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134 (308)
T ss_pred --------------------------------CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356799999999988887754 44689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
+++||||||+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 195 (308)
T cd06634 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANXFVGTPYWMAPEVILAMDEGQYDGKV 195 (308)
T ss_pred CcccCCCCHHhEEECCCCcEEECCcccceeecC-------------------cccccCCccccCHHHHhhcccCCCCccc
Confidence 999999999999999999999999999875421 123468899999998753 23578899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||||++|+|++ ||.............. ...........+..+.+||++||+.+|.+||++.++++|+|+....
T Consensus 196 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred chHHHHHHHHHHHcCCCCCccccHHHHHHHHhh-cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 99999999999997 6655443333322222 1111112224556889999999999999999999999999987753
No 331
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.2e-33 Score=309.38 Aligned_cols=244 Identities=23% Similarity=0.324 Sum_probs=194.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 72 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTL--------- 72 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEec---------
Confidence 57999999999999999999976 567899999864332 24568899999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+++.... .+++..+..++.|++.||.|||+
T Consensus 73 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (261)
T cd05068 73 -------------------------------EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121 (261)
T ss_pred -------------------------------CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999994 69999987644 68999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++|
T Consensus 122 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 186 (261)
T cd05068 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--------------EAREGAKFPIKWTAPEAALY-NRFSIKSD 186 (261)
T ss_pred CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--------------cccCCCcCceeccCcccccc-CCCCchhh
Confidence 9999999999999999999999999999986531110 00111233468999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||+++|||++ ||............ ..... ++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-DQGYR-MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCC-CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999999999996 66654444333322 22222 2223355678999999999999999999999986
No 332
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.6e-33 Score=315.45 Aligned_cols=249 Identities=20% Similarity=0.315 Sum_probs=196.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||.|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAV--- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC---
Confidence 3689999999999999999999753 6789999998643 233345678899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 488 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 488 (1170)
...+|++|||++ ++|.+++....
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (288)
T cd05050 80 -------------------------------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122 (288)
T ss_pred -------------------------------------CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccc
Confidence 345799999997 59998886431
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 489 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 489 ---~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++..+...... ...
T Consensus 123 ~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~ 189 (288)
T cd05050 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KAS 189 (288)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccc-------------ccc
Confidence 3678889999999999999999999999999999999999999999999998754221100 001
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~ 641 (1170)
....+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+...... .+..++.....++++.+||.
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~ 266 (288)
T cd05050 190 ENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVR--DGNVLSCPDNCPLELYNLMR 266 (288)
T ss_pred CCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCCHHHHHHHH
Confidence 12245678999999887 568999999999999999985 675554444333322 23333333455678999999
Q ss_pred HccCCCCCCCCCHHHHHh
Q 001059 642 RLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~ 659 (1170)
+||+.||.+|||+.++++
T Consensus 267 ~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 267 LCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHcccCcccCCCHHHHHH
Confidence 999999999999999986
No 333
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=349.66 Aligned_cols=248 Identities=22% Similarity=0.354 Sum_probs=203.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-Cc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-GR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
...++.+.||+|+||.||.|....- |. .||||.++ +..+.....+|++|..+|+.++|||||+++|.+++.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~-~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLK-RLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecc-ccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC---
Confidence 4567889999999999999998643 32 38899886 345556778999999999999999999999998653
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------CCCCHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQ 501 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~q 501 (1170)
...+|++|||. |+|..+|++. ..++......++.|
T Consensus 768 -------------------------------------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 768 -------------------------------------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred -------------------------------------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 34589999995 6999999865 24888999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||.|+.|||++++|||||..+|+|++....|||+|||+|+.+...++.+.. ....-...|||||.++
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~-------------~~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKH-------------GEAMLPVKWMPPESLK 877 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheecc-------------CccccceecCCHHHHh
Confidence 999999999999999999999999999999999999999965444332211 1112345899999999
Q ss_pred CCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
. ..++.|+|||||||+|||++| ||....+.+.....+. .+++ +.+..++..+.++|..||+.+|++||++..|
T Consensus 878 d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~-ggRL-~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i 954 (1025)
T KOG1095|consen 878 D-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE-GGRL-DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTI 954 (1025)
T ss_pred h-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh-CCcc-CCCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence 7 679999999999999999996 8877777666554444 3433 3445677789999999999999999999999
Q ss_pred Hh
Q 001059 658 LQ 659 (1170)
Q Consensus 658 L~ 659 (1170)
+.
T Consensus 955 ~~ 956 (1025)
T KOG1095|consen 955 VE 956 (1025)
T ss_pred Hh
Confidence 97
No 334
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=4.7e-33 Score=349.56 Aligned_cols=149 Identities=30% Similarity=0.563 Sum_probs=133.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|.++++||+|+||+||+|.+..+++.||||+++.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 75 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS------- 75 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-------
Confidence 5789999999999999999999999999999999975432 23344678899999999999999999977632
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..++|+||||+. ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 76 ---------------------------------~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~ 122 (669)
T cd05610 76 ---------------------------------ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122 (669)
T ss_pred ---------------------------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5999999888889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+||+||||||+||||+.++.+||+|||+++.
T Consensus 123 ~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 123 HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999999999999999999874
No 335
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=327.56 Aligned_cols=248 Identities=31% Similarity=0.481 Sum_probs=189.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.....||+|+||.||+|... +|..||||.+....... ..+|.+|+.+|.+++|||+|+++|||.+.+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------ 144 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------ 144 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC------
Confidence 367888889999999999999987 55999999876543322 445999999999999999999999996531
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...++|+||++ |+|.++|+... .++|....+|+.++|+||+|||
T Consensus 145 ---------------------------------~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH 191 (361)
T KOG1187|consen 145 ---------------------------------EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLH 191 (361)
T ss_pred ---------------------------------ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 15789999997 79999998655 8999999999999999999999
Q ss_pred hCC---ccccCCCCCceeecCCCCEEEeecCcchhccc-cccccCCCCCCCCCCccccCccc-ccCccCCCcccccCCCC
Q 001059 511 GQG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 511 s~g---IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~ 585 (1170)
... ||||||||+|||+|++.++||+|||+|+.... .. ..... .||.+|+|||++.. +.
T Consensus 192 ~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~----------------~~~~~~~gt~gY~~PEy~~~-g~ 254 (361)
T KOG1187|consen 192 EGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT----------------SVSTTVMGTFGYLAPEYAST-GK 254 (361)
T ss_pred cCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc----------------ceeeecCCCCccCChhhhcc-CC
Confidence 854 99999999999999999999999999964321 10 01112 79999999999987 67
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchh---HH--HHHHHHhhhcCCC----CCcc--ccC-----CHHHHHHHHHccCC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAM---ER--QIVLSDLKQKGEL----PPSW--VAK-----FSEQESLLRRLMSP 646 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~---~~--~~~~~~l~~~~~~----p~~~--~~~-----~~e~~~LI~~~L~~ 646 (1170)
.+.|+|||||||+|.||++ |..... +. ..........+.+ -+.. ... ...+..+..+|++.
T Consensus 255 lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~ 334 (361)
T KOG1187|consen 255 LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRP 334 (361)
T ss_pred cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCc
Confidence 8999999999999999997 232111 10 1111111111111 1111 111 12356788899999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
+|..||++.++++.
T Consensus 335 ~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 335 DPKERPTMSQVVKE 348 (361)
T ss_pred CCCcCcCHHHHHHH
Confidence 99999999998653
No 336
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.6e-33 Score=313.02 Aligned_cols=246 Identities=26% Similarity=0.357 Sum_probs=199.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++.++||.|+||.||+|.++. +..+|+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 73 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSV-------- 73 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEec--------
Confidence 3679999999999999999999986 89999999875432 235678899999999999999999987632
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH 121 (261)
T cd05148 74 --------------------------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE 121 (261)
T ss_pred --------------------------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 4999998753 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... .......++..|+|||++.+ ..++.++
T Consensus 122 ~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~-~~~~~~~ 185 (261)
T cd05148 122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV---------------YLSSDKKIPYKWTAPEAASH-GTFSTKS 185 (261)
T ss_pred HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc---------------ccccCCCCceEecCHHHHcc-CCCCchh
Confidence 9999999999999999999999999999998653211 01123346778999999887 5688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||......+...... ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 186 DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 186 DVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT--AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred hHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH--hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999986 676555444433333 222233345667899999999999999999999999863
No 337
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5e-33 Score=310.79 Aligned_cols=249 Identities=21% Similarity=0.330 Sum_probs=197.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|++.+.||+|+||.||+|.++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK------ 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578999999999999999999875544 79999886433 23345678999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++|||++ ++|.+++... ..+++.+++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l 122 (267)
T cd05066 77 ----------------------------------SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122 (267)
T ss_pred ----------------------------------CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 346799999997 5899998764 4689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.++|+|||++........ .........++..|+|||.+.+ ..++.+
T Consensus 123 H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pe~~~~-~~~~~~ 189 (267)
T cd05066 123 SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------AAYTTRGGKIPIRWTAPEAIAY-RKFTSA 189 (267)
T ss_pred HHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc------------eeeecCCCccceeecCHhHhcc-CccCch
Confidence 999999999999999999999999999999986532110 0011122344678999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+|+|||||++||+++ ||......+...... ....++.....++.+.+++.+||+.+|.+||++.++++
T Consensus 190 ~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 190 SDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE--EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred hhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh--CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 999999999999874 665544443333322 22223333456778999999999999999999999986
No 338
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.6e-33 Score=317.69 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|.+. .++..||+|+++.... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 468999999999999999999863 3456899998874432 33456789999999999 89999999988732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~ 504 (1170)
...+|++|||++ ++|.+++.... .+++.++..++.||+.
T Consensus 111 --------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 111 --------------------------------------GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 345799999997 69999887543 3899999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||+|||+++|+|+||||+|||++.++.+||+|||+++.+..... ........+++.|+|||++.+ .
T Consensus 153 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~ 218 (302)
T cd05055 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFN-C 218 (302)
T ss_pred HHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-------------eeecCCCCcccccCCHhhhcc-C
Confidence 99999999999999999999999999999999999985432110 001122346788999999887 5
Q ss_pred CCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|||++ ||.............. .+..+......++++.+++.+||+.+|.+|||+.++++.
T Consensus 219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 68999999999999999985 6654443333333322 222222333456789999999999999999999999864
No 339
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.1e-33 Score=308.58 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=192.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||++... |..||+|.++... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 71 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-------
Confidence 468999999999999999999875 8899999885321 245788999999999999999999876432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 119 (256)
T cd05082 72 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119 (256)
T ss_pred --------------------------------CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999887644 4889999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||++...... .....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 180 (256)
T cd05082 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCEeccccchheEEEcCCCcEEecCCccceecccc------------------CCCCccceeecCHHHHcc-CCCCchh
Confidence 999999999999999999999999999998753211 112244568999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+..... . ....+......++.+.++|.+||+.+|++|||+.++++.
T Consensus 181 Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999985 66544333332222 1 122222334567799999999999999999999999863
No 340
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=3.6e-33 Score=314.05 Aligned_cols=250 Identities=31% Similarity=0.488 Sum_probs=196.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|++.+.||.|+||+||+|....+++.||||.+...... .......+|+..+++++ ||||+++++++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~---------- 69 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE---------- 69 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc----------
Confidence 67889999999999999999988999999998654332 22334567999999999 9999999877632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|+||||++++|.+.+.... .+++..+..++.|++.||.|||++|
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 70 ------------------------------NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred ------------------------------CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35679999999989999887754 7899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||||+||+++.++.++|+|||++....... ..+...++..|+|||++.+...++.++|+|
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 183 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP----------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIW 183 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------CcCCCCCcccccCceeeecCcCcCCccchh
Confidence 9999999999999999999999999997542111 112346889999999886655689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCC--------CccccCCHHHHHHHHHc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP--------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p--------~~~~~~~~e~~~LI~~~ 643 (1170)
|||+++|||++ ||................+ ..+ ......++.+.++|++|
T Consensus 184 s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 263 (283)
T cd07830 184 ALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDM 263 (283)
T ss_pred hHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHh
Confidence 99999999997 5543322222111110000 000 01112346789999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+|||+.+++.|+||
T Consensus 264 l~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 264 LRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccCcccCCCHHHHhhCCCC
Confidence 99999999999999999996
No 341
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=305.75 Aligned_cols=262 Identities=24% Similarity=0.403 Sum_probs=212.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
-+++|.++++||+|+|.+|.+++++.|.+.||+|++++.-. ..+..+-+..|-.+..+. +||.+|.++.||
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf------- 320 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF------- 320 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh-------
Confidence 36899999999999999999999999999999999976432 222334455566666655 799999999887
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+....+|+|.||++ |+|.-++++...++++.++.|..+|+.||.||
T Consensus 321 ---------------------------------qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~fl 367 (593)
T KOG0695|consen 321 ---------------------------------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFL 367 (593)
T ss_pred ---------------------------------cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHH
Confidence 23567899999997 59999999989999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|||+||||.+|+|+|..|++||+|+|+++.--.+ + -..+++||||.|.|||++.| ..|+..
T Consensus 368 h~rgiiyrdlkldnvlldaeghikltdygmcke~l~~------------g---d~tstfcgtpnyiapeilrg-eeygfs 431 (593)
T KOG0695|consen 368 HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP------------G---DTTSTFCGTPNYIAPEILRG-EEYGFS 431 (593)
T ss_pred hhcCeeeeeccccceEEccCCceeecccchhhcCCCC------------C---cccccccCCCcccchhhhcc-cccCce
Confidence 9999999999999999999999999999999842111 1 12467899999999999999 689999
Q ss_pred chhHHHHHHHHHhhc---CCCc------hhH-HHHHHHHhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCC------
Q 001059 590 ADMYSLGIVFFELWH---PFST------AME-RQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRP------ 652 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~------~~~-~~~~~~~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP------ 652 (1170)
+|+|+|||+++||+. ||.- ..+ ...+.+.+. ....+|.... -.+..+++..|++||.+|.
T Consensus 432 vdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsls---vkas~vlkgflnkdp~erlgc~~~~ 508 (593)
T KOG0695|consen 432 VDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLS---VKASHVLKGFLNKDPKERLGCRPQT 508 (593)
T ss_pred ehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceee---hhhHHHHHHhhcCCcHHhcCCCccc
Confidence 999999999999995 8851 122 223333333 3344554433 3677899999999999986
Q ss_pred CHHHHHhccCCCCchHHHHHH
Q 001059 653 SATELLQDALPPQMEYELLDN 673 (1170)
Q Consensus 653 ta~eiL~~~~~~~~~~~~~~~ 673 (1170)
.+.++-.|+||....|+.+..
T Consensus 509 g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 509 GFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred chhhhhcchhhhhCCHHHHhh
Confidence 578999999999999887643
No 342
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.6e-33 Score=309.98 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||.||+|.++.+|+ .||||+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 76 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----
Confidence 3578999999999999999999987765 5999998643 234455689999999999999999999987632
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...++++|||++ ++|.+++... +.+++..++.++.|++.||+|
T Consensus 77 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~ 121 (269)
T cd05065 77 -----------------------------------SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 121 (269)
T ss_pred -----------------------------------CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345799999997 5898888753 468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+||+++.++.+||+|||++.......... . .....+...+..|+|||.+.+ ..++.
T Consensus 122 lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~--~--------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (269)
T cd05065 122 LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP--T--------YTSSLGGKIPIRWTAPEAIAY-RKFTS 190 (269)
T ss_pred HHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc--c--------cccccCCCcceeecCHhHhcc-Ccccc
Confidence 999999999999999999999999999999987653211000 0 000111223568999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||...........+ ...... +.....++.+.+++.+||..+|.+||++.++++.
T Consensus 191 ~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 191 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQDYRL-PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcC-CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999874 77655444333332 222222 2234566789999999999999999999999863
No 343
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.7e-33 Score=308.91 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=193.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. ++..||+|.++..... ...+.+|+.++++++||||+++++++.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~--------- 71 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS--------- 71 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC---------
Confidence 468999999999999999999876 6677999998754332 356889999999999999999997651
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05070 72 --------------------------------EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 119 (260)
T ss_pred --------------------------------CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123689999997 5999988753 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 184 (260)
T cd05070 120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 184 (260)
T ss_pred HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--------------ccccCCCCCccccChHHHhc-CCCcchh
Confidence 99999999999999999999999999999976432110 01112345678999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||+++|+|++ ||......+..... . ....++.....+..+.+|+.+||+++|.+|||+.+++.
T Consensus 185 Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 185 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV-E-RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999986 66554443333322 2 22222333456678999999999999999999999874
No 344
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.3e-33 Score=312.66 Aligned_cols=252 Identities=28% Similarity=0.443 Sum_probs=193.2
Q ss_pred CCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
++|++++.||+|+||.||+|.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---- 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC----
Confidence 5789999999999999999984 457889999998643 233456788999999999999999999876321
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 ----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~ 123 (284)
T cd05081 78 ----------------------------------GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEY 123 (284)
T ss_pred ----------------------------------CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 1345799999996 6999998754 468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+||+++.++.+||+|||++......... ........++..|+|||++.+ ..++.
T Consensus 124 LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~ 190 (284)
T cd05081 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY------------YKVREPGESPIFWYAPESLTE-SKFSV 190 (284)
T ss_pred HHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc------------eeecCCCCCceEeeCHHHhcc-CCcCh
Confidence 99999999999999999999999999999999865321100 000112234557999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH---------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~---------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
++|||||||++|||++ |+...... ......+. ....++.....++++.+||.+||+.+|++
T Consensus 191 ~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 191 ASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999999986 22111000 00011111 22222333456678999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||+.++++.
T Consensus 270 Rpt~~ei~~~ 279 (284)
T cd05081 270 RPSFSELALQ 279 (284)
T ss_pred CCCHHHHHHH
Confidence 9999999864
No 345
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.8e-33 Score=309.20 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=193.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.++||+|+||.||+|.+..+ ..||+|+++..... ...+.+|+.+++.++||||+++++.+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~---------- 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS---------- 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC----------
Confidence 5799999999999999999998755 56999998743332 356889999999999999999987651
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 120 (262)
T cd05071 72 -------------------------------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120 (262)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 134589999997 5999998753 358899999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
++++||||||+||+++.++.+||+|||.++....... .......++..|+|||++.+ ..++.++|
T Consensus 121 ~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~D 185 (262)
T cd05071 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (262)
T ss_pred CCccccccCcccEEEcCCCcEEeccCCceeecccccc--------------ccccCCcccceecCHhHhcc-CCCCchhh
Confidence 9999999999999999999999999999976532110 00112346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||++ ||......+....+.. . ..++.....++.+.++|.+||+.||.+||++.++++
T Consensus 186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVER-G-YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-C-CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999997 6765544443332221 2 122223456678999999999999999999999875
No 346
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.1e-33 Score=314.45 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=196.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVKFYGVCGD---- 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc----
Confidence 57899999999999999999864 2456799998753 233344678899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDK 492 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e 492 (1170)
...+++||||++ ++|.+++.... .+++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 122 (291)
T cd05094 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122 (291)
T ss_pred ------------------------------------CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCH
Confidence 345799999996 59999886532 3789
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++
T Consensus 123 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------~~~~~~~~~~~ 189 (291)
T cd05094 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPI 189 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce-------------eecCCCCCcce
Confidence 99999999999999999999999999999999999999999999999975432110 01122346788
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......+..+.+++.+||+.||
T Consensus 190 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P 266 (291)
T cd05094 190 RWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT--QGRVLERPRVCPKEVYDIMLGCWQREP 266 (291)
T ss_pred eecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--CCCCCCCCccCCHHHHHHHHHHcccCh
Confidence 9999999887 568999999999999999986 665544444332221 333333334456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
++|||+.++++.
T Consensus 267 ~~Rpt~~~v~~~ 278 (291)
T cd05094 267 QQRLNIKEIYKI 278 (291)
T ss_pred hhCcCHHHHHHH
Confidence 999999999864
No 347
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1e-32 Score=308.06 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|+..+.||+|+||.||+|.++.++. .+|+|.++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK------ 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc------
Confidence 578899999999999999999986665 79999886432 23345678999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++|||++ ++|.+++... ..+++..+..++.|++.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 123 (268)
T cd05063 78 ----------------------------------FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123 (268)
T ss_pred ----------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5898888653 5689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+||+++.++.+||+|||++........ ..........++.|+|||++.+ ..++.+
T Consensus 124 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~PE~~~~-~~~~~~ 190 (268)
T cd05063 124 SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE------------GTYTTSGGKIPIRWTAPEAIAY-RKFTSA 190 (268)
T ss_pred HHCCeeccccchhhEEEcCCCcEEECCCccceecccccc------------cceeccCCCcCceecCHHHhhc-CCcChH
Confidence 999999999999999999999999999999876532110 0001112234568999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||...........+ . .....+.....++++.+++.+||+.+|.+||++.++++.
T Consensus 191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI-N-DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999875 77654444333332 2 222333334567789999999999999999999999864
No 348
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9.4e-33 Score=306.19 Aligned_cols=241 Identities=23% Similarity=0.383 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||+|... |+.||+|.++.... ..+++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 71 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-------- 71 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--------
Confidence 468999999999999999999875 89999999874432 45678999999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh 119 (256)
T cd05039 72 --------------------------------GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119 (256)
T ss_pred --------------------------------CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999987665 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||+++...... ....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------~~~~~~~~~~ape~~~~-~~~~~~~ 180 (256)
T cd05039 120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------DSGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCccchhcccceEEEeCCCCEEEccccccccccccc------------------ccCCCcccccCchhhcC-CcCCcHH
Confidence 9999999999999999999999999999998652111 12234567999999876 5688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|||++ ||......... ..+.. ...+......++++.++|.+||..+|.+|||+.++++.
T Consensus 181 Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVV-PHVEK-GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHhc-CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 99999999999985 66554433332 22221 11222233456789999999999999999999999864
No 349
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.7e-33 Score=316.74 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=195.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
++|.+.+.||+|+||.||+|++.. ++..||+|.++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 689999999999999999998753 23579999987432 233456788999999999 79999999988732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CC
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 489 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 489 (1170)
...+|++|||++ ++|.+++... ..
T Consensus 96 ---------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (307)
T cd05098 96 ---------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136 (307)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 346799999997 5999998753 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
++..+++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------~~~~~~~ 203 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------KKTTNGR 203 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh-------------hccccCC
Confidence 788899999999999999999999999999999999999999999999998754321100 0112224
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
+++.|+|||++.+ ..++.++|||||||++|||++ ||..... +.....+. ....++.....++++.+||.+||.
T Consensus 204 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 280 (307)
T cd05098 204 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWH 280 (307)
T ss_pred CccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 5644333 33333332 222233334567799999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.+|.+|||+.+++++
T Consensus 281 ~~p~~Rps~~evl~~ 295 (307)
T cd05098 281 AVPSQRPTFKQLVED 295 (307)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999875
No 350
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7e-33 Score=312.22 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+|...++||+|+||.||+|... .++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTE---- 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec----
Confidence 57888999999999999999753 34678999987633 33445679999999999999999999987732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------------CCCHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------HFDKE 493 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------~l~e~ 493 (1170)
....|++|||++ ++|.+++.... .+++.
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05092 79 ------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122 (280)
T ss_pred ------------------------------------CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHH
Confidence 345799999997 58998886542 47889
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
.++.++.||+.||+|||++|++||||||+|||+++++.+||+|||+++....... ........+++.
T Consensus 123 ~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05092 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCce-------------eecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999975421110 001122346788
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|+|||.+.+ ..++.++|||||||++|||++ ||............. .+..+......++.+.++|.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 190 WMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT--QGRELERPRTCPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred ccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH--cCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999887 568999999999999999986 665444433333322 2222233345678999999999999999
Q ss_pred CCCCHHHHHh
Q 001059 650 DRPSATELLQ 659 (1170)
Q Consensus 650 ~RPta~eiL~ 659 (1170)
+||++.++++
T Consensus 267 ~Rp~~~~l~~ 276 (280)
T cd05092 267 QRMVIKDIHS 276 (280)
T ss_pred hCCCHHHHHH
Confidence 9999999985
No 351
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4e-33 Score=319.09 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=192.6
Q ss_pred CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccc
Q 001059 367 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 446 (1170)
Q Consensus 367 ~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~ 446 (1170)
++|.||++++..+|+.||||+++...........+.+|+.+++.++||||++++++|.+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--------------------- 70 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--------------------- 70 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec---------------------
Confidence 55667777777789999999998664455566789999999999999999999988743
Q ss_pred cccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 001059 447 FSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523 (1170)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~N 523 (1170)
....|++||||+ ++|.+++... ..+++..+..++.||+.||+|||+++|+||||||+|
T Consensus 71 -------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~N 131 (314)
T cd08216 71 -------------------DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASH 131 (314)
T ss_pred -------------------CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcce
Confidence 356799999997 5888888753 458999999999999999999999999999999999
Q ss_pred eeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHHHHHHHHHh
Q 001059 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFEL 602 (1170)
Q Consensus 524 ILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~EL 602 (1170)
||++.++.+||+|||.+..+....... ...........++..|+|||++.+. ..++.++|||||||++|||
T Consensus 132 ili~~~~~~kl~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el 203 (314)
T cd08216 132 ILLSGDGKVVLSGLRYSVSMIKHGKRQ--------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACEL 203 (314)
T ss_pred EEEecCCceEEecCccceeeccccccc--------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHH
Confidence 999999999999999987653221100 0001112344678899999998763 3488999999999999999
Q ss_pred hc---CCCchhHHHHHHHHhhhcCC-------CCC------------------------ccccCCHHHHHHHHHccCCCC
Q 001059 603 WH---PFSTAMERQIVLSDLKQKGE-------LPP------------------------SWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 603 lt---Pf~~~~~~~~~~~~l~~~~~-------~p~------------------------~~~~~~~e~~~LI~~~L~~dP 648 (1170)
++ ||.................. .+. .....++++.+||.+||+.||
T Consensus 204 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 283 (314)
T cd08216 204 ANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDP 283 (314)
T ss_pred HhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCC
Confidence 96 77655443333222211100 000 001122467899999999999
Q ss_pred CCCCCHHHHHhccCCCCch
Q 001059 649 SDRPSATELLQDALPPQME 667 (1170)
Q Consensus 649 ~~RPta~eiL~~~~~~~~~ 667 (1170)
++|||+.++|+|||+.++.
T Consensus 284 ~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 284 ESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred CcCcCHHHHhcCchHhhhc
Confidence 9999999999999988663
No 352
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1e-32 Score=305.87 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=193.3
Q ss_pred eeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~-tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||+|.+.. +++ .||||.+...... ...+.+.+|+.++++++||||+++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVL------------- 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEc-------------
Confidence 368999999999999865 333 6999998755443 55678999999999999999999998762
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
. ..++++|||++ ++|.+++.... .+++..++.++.|++.||+|||++|+
T Consensus 67 ---------------------------~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 67 ---------------------------T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred ---------------------------C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 46799999996 69999987654 68999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.+||+|||++..+..... .........++..|+|||++.+ ..++.++||||
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~s 185 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNED------------HYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWM 185 (257)
T ss_pred cccccCcccEEEecCCEEEecccccccccccccc------------ceecccCCCCCceecCHHHhcc-cCcCchhhhHH
Confidence 9999999999999999999999999987632210 0011123457889999999887 56899999999
Q ss_pred HHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 595 LGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 595 lGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||++|||++ ||......+....... .....+.....++.+.+++.+||+.+|++||++.++++.
T Consensus 186 lG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 186 FGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 9999999986 7655444443333322 222222233456789999999999999999999999864
No 353
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-32 Score=306.70 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|+++++||.|+||.||+|..+ +++.||+|.+...... ...+.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 71 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT--------- 71 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc---------
Confidence 468999999999999999999876 6788999998744332 457889999999999999999987641
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||+. ++|.+++... ..+++.+++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 119 (260)
T cd05067 72 --------------------------------QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119 (260)
T ss_pred --------------------------------cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 234689999996 5899988653 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.|++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (260)
T cd05067 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 184 (260)
T ss_pred cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--------------ccccCCcccccccCHHHhcc-CCcCccc
Confidence 99999999999999999999999999999976532110 01123356788999999887 5688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||+++|||++ ||......+.... +. ....++.....+.++.++|.+||+.+|++||++++++.
T Consensus 185 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 185 DVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LE-RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred chHHHHHHHHHHHhCCCCCCCCCChHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999996 6755444333222 22 22222333445678999999999999999999999975
No 354
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=5e-33 Score=329.35 Aligned_cols=251 Identities=21% Similarity=0.310 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~ 427 (1170)
.++|.+.+.||+|+||.||+|++. .++..||+|+++..... ...+.+.+|+.+|..+. |||||+++++|..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-- 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGACTK-- 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--
Confidence 357888899999999999999964 34568999999754322 33457889999999997 9999999998833
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 488 (1170)
...+|+|||||+ |+|.++++...
T Consensus 113 --------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
T cd05107 113 --------------------------------------GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLI 154 (401)
T ss_pred --------------------------------------CCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccc
Confidence 245799999996 69998886431
Q ss_pred --------------------------------------------------------------------------------
Q 001059 489 -------------------------------------------------------------------------------- 488 (1170)
Q Consensus 489 -------------------------------------------------------------------------------- 488 (1170)
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
T cd05107 155 SGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESP 234 (401)
T ss_pred ccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCC
Confidence
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||+++.+..... .......
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~ 301 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN-------------YISKGST 301 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc-------------cccCCCc
Confidence 256677889999999999999999999999999999999999999999999986422110 0011234
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+.....+. .+..++.....+.++.+|+.+||
T Consensus 302 ~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li~~cl 379 (401)
T cd05107 302 FLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK-RGYRMAKPAHASDEIYEIMQKCW 379 (401)
T ss_pred CCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 67889999999987 568999999999999999986 6654433333333332 22223333456789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
..+|.+||++.+|++.
T Consensus 380 ~~~P~~RPs~~ell~~ 395 (401)
T cd05107 380 EEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCChhHCcCHHHHHHH
Confidence 9999999999999874
No 355
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.4e-33 Score=315.79 Aligned_cols=250 Identities=23% Similarity=0.358 Sum_probs=195.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-------~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
..+|.+.+.||+|+||.||+|++. .++..||+|.+... ........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 468899999999999999999863 23457999988633 2233456789999999999 89999999988732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------C
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------D 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~ 488 (1170)
...+|++|||++ ++|.+++... .
T Consensus 93 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 132 (304)
T cd05101 93 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDE 132 (304)
T ss_pred ----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcc
Confidence 346799999997 5999988753 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....... .......
T Consensus 133 ~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-------------~~~~~~~ 199 (304)
T cd05101 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-------------YKKTTNG 199 (304)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-------------cccccCC
Confidence 467788999999999999999999999999999999999999999999999986532110 0111233
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+. ...+.. ...+......+.++.+||.+||
T Consensus 200 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~li~~cl 276 (304)
T cd05101 200 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKLLKE-GHRMDKPANCTNELYMMMRDCW 276 (304)
T ss_pred CCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHHc-CCcCCCCCCCCHHHHHHHHHHc
Confidence 56788999999987 568999999999999999986 5544333332 222222 2222233456779999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
..+|.+|||+.++++.
T Consensus 277 ~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 277 HAIPSHRPTFKQLVED 292 (304)
T ss_pred ccChhhCCCHHHHHHH
Confidence 9999999999999975
No 356
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.2e-33 Score=316.53 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=200.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+...+||+|+||.||++.++.+|+.||||++.... ......+.+|+.+++.++||||+++++.+..
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 88 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV---------- 88 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEe----------
Confidence 3344578999999999999999999999999886432 2345678999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
..+.|++|||+++ +|.+++. ...+++..++.++.|++.||+|||++|+
T Consensus 89 ------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~gi 137 (292)
T cd06657 89 ------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGV 137 (292)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3578999999975 7777664 4568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||
T Consensus 138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 201 (292)
T cd06657 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIWS 201 (292)
T ss_pred ecCCCCHHHEEECCCCCEEEcccccceeccccc---------------ccccccccCccccCHHHhcC-CCCCchhhHHH
Confidence 999999999999999999999999987542110 01123468999999999876 56789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+++|+|++ ||..........................++.+.++|.+||+.||.+||++.++++|+||....
T Consensus 202 lGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 9999999996 776544333222211111111122344567899999999999999999999999999877654
No 357
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=8.3e-33 Score=314.16 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=191.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCcee
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~----------------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~ 418 (1170)
++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 578999999999999999987542 3457999998643 23334567899999999999999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 488 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 488 (1170)
+++++.. ....|++|||++ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 84 LLAVCIT----------------------------------------SDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred EEEEEec----------------------------------------CCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 9988732 245799999996 59998886532
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCc
Q 001059 489 --HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 566 (1170)
Q Consensus 489 --~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1170)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||+++.+...... ....
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~ 190 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY-------------RIQG 190 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcce-------------eccC
Confidence 3677889999999999999999999999999999999999999999999999864221100 0011
Q ss_pred ccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHHh---hh--cCCCCCccccCCHHH
Q 001059 567 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQ 636 (1170)
Q Consensus 567 ~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~e~ 636 (1170)
...+++.|+|||...+ ..++.++|||||||++|||++ ||......+...... .. .....+.....++.+
T Consensus 191 ~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (296)
T cd05095 191 RAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSL 269 (296)
T ss_pred cCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHH
Confidence 2345678999998776 568999999999999999985 665444333222110 00 111122233456789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHh
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.+||.+||+.||.+||++.++++
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999999976
No 358
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.1e-32 Score=308.85 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=197.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|+.++.||.|+||+||+|+++.+ .+.||+|.+.... .......+.+|+.++++++||||+++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE---- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC----
Confidence 6789999999999999999998643 4679999875432 22345679999999999999999999987622
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------CCCHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------HFDKELAWHLF 499 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------~l~e~~~~~i~ 499 (1170)
....|++|||++ ++|.+++.... .+++..+..++
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 123 (275)
T cd05046 80 ------------------------------------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC 123 (275)
T ss_pred ------------------------------------CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH
Confidence 345799999997 69999987655 68999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
.||+.||+|||++||+||||||+|||++.++.++|+|||++....... ........+++.|+|||.
T Consensus 124 ~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~y~~PE~ 189 (275)
T cd05046 124 TQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE--------------YYKLRNALIPLRWLAPEA 189 (275)
T ss_pred HHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc--------------ccccCCceeEEeecChhh
Confidence 999999999999999999999999999999999999999987432111 111233467788999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
+.+ ..++.++||||||+++|+|++ ||...................+ .....+..+.+++.+||+.+|.+|||+.
T Consensus 190 ~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 190 VQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 887 457899999999999999986 7765544444333322222221 2234567899999999999999999999
Q ss_pred HHHhc
Q 001059 656 ELLQD 660 (1170)
Q Consensus 656 eiL~~ 660 (1170)
++++.
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 99875
No 359
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=321.77 Aligned_cols=244 Identities=23% Similarity=0.359 Sum_probs=203.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccC--Cc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLD--GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~t--g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.+.||.|.||.||+|....- |. .||||.-+ .++.....+.|+.|..+|++++|||||+++|.|.+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK-~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------- 462 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCK-TDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------- 462 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhc-cCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-------
Confidence 34456899999999999997522 33 58888765 44666678899999999999999999999999843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...|||||+++ |.|..+|+.+. .++......|++||+.||+|||
T Consensus 463 ----------------------------------~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe 508 (974)
T KOG4257|consen 463 ----------------------------------QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE 508 (974)
T ss_pred ----------------------------------cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 34699999998 79999998654 6888999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
|.++|||||-.+|||+.+..-|||+|||+++.+....+.. .+...-..-|||||.+.- ..++.++
T Consensus 509 SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk--------------aS~~kLPIKWmaPESINf-RrFTtAS 573 (974)
T KOG4257|consen 509 SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK--------------ASRGKLPIKWMAPESINF-RRFTTAS 573 (974)
T ss_pred hhchhhhhhhhhheeecCcceeeecccchhhhccccchhh--------------ccccccceeecCccccch-hcccchh
Confidence 9999999999999999999999999999999876544322 122233457999998875 5799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||.|||++||++. ||.+..+......+ +++..+|.+++++|.+..|+.+||+.||.+||++.+|..
T Consensus 574 DVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i--EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 574 DVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI--ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred hHHHHHHHHHHHHHhcCCccccccccceEEEe--cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 99999999999985 99877665443322 367778888899999999999999999999999999865
No 360
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=328.07 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=197.9
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...+.++|++...+|.|+|+.|-.|.+..+++.+++|++..... +..+|+.++... +||||+++++.+.
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~---- 386 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYE---- 386 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceec----
Confidence 34567899999999999999999999999999999999975521 234577665555 8999999998772
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+..+.|+|||++.| -+.+.+.....+. .++..|+.+|+.|+.
T Consensus 387 ------------------------------------~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~ 429 (612)
T KOG0603|consen 387 ------------------------------------DGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVD 429 (612)
T ss_pred ------------------------------------CCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHH
Confidence 35788999999975 5555555544444 788889999999999
Q ss_pred HHHhCCccccCCCCCceee-cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFF-DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi-~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|||++|+|||||||+|||+ ++.++++|+|||.++.+... ..+.+-|..|.|||++.. ..|
T Consensus 430 ~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~------------------~~tp~~t~~y~APEvl~~-~~y 490 (612)
T KOG0603|consen 430 YLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS------------------CDTPALTLQYVAPEVLAI-QEY 490 (612)
T ss_pred HHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh------------------hcccchhhcccChhhhcc-CCC
Confidence 9999999999999999999 58899999999999976432 123478899999999996 779
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+++|||||||++||+|++ ||........... ....++.-..++.++++||.+||+.||.+||++.+++.|+|+
T Consensus 491 t~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~----~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 491 TEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT----RIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CcchhhHHHHHHHHHHHhCCCccccCCchHHHHH----hhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 999999999999999997 6654444322222 222233336678899999999999999999999999999999
No 361
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-32 Score=309.53 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=198.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||.||+|.+.. ++..|++|.+.. .........+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 3689999999999999999999985 368899998863 33444567789999999999999999999887431
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------CCCCHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 500 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~ 500 (1170)
....+++++|++ ++|.+++... ..+++..++.++.
T Consensus 81 ------------------------------------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 124 (280)
T cd05043 81 ------------------------------------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAI 124 (280)
T ss_pred ------------------------------------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHH
Confidence 245689999997 6999888653 4589999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
||+.||+|||+++++||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++
T Consensus 125 ~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------~~~~~~~~~~~y~apE~~ 191 (280)
T cd05043 125 QIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-------------CLGDNENRPVKWMALESL 191 (280)
T ss_pred HHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE-------------EeCCCCCcchhccCHHHH
Confidence 9999999999999999999999999999999999999999865322100 011223467789999999
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
.+ ..++.++|||||||++||+++ ||......+... .+. ....++.....++++.+++.+||..||++|||+.+
T Consensus 192 ~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 268 (280)
T cd05043 192 VN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-YLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQ 268 (280)
T ss_pred hc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 87 568999999999999999986 676554433322 222 22222333455778999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+++.
T Consensus 269 ~~~~ 272 (280)
T cd05043 269 LVQC 272 (280)
T ss_pred HHHH
Confidence 9863
No 362
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.9e-33 Score=312.69 Aligned_cols=235 Identities=20% Similarity=0.331 Sum_probs=183.9
Q ss_pred eeeccCCcEEEEEEEEccCCc-------EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGR-------HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~-------~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.||.|+||.||+|.++.++. .||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------- 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------- 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------
Confidence 369999999999999875544 48888875322 2345678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....++|||||+ ++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 71 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (258)
T cd05078 71 --------------------------------GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED 118 (258)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235689999997 58999887644 58999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCC--------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 512 QGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+||+||||||+|||++.++. ++++|||++..... .....+++.|+|||++.+.
T Consensus 119 ~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~ 179 (258)
T cd05078 119 KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-------------------KEILLERIPWVPPECIENP 179 (258)
T ss_pred CCeecCCCccceEEEecccccccCCCceEEecccccccccCC-------------------chhccccCCccCchhccCC
Confidence 99999999999999987765 69999998864321 1234678899999999875
Q ss_pred CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..++.++|||||||++|||++ ||...... ...........+|. ..++++.++|.+||+.||++|||++++++
T Consensus 180 ~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 180 QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-KKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-HHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 568999999999999999997 33322222 22222222223332 34568999999999999999999999997
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 256 ~ 256 (258)
T cd05078 256 D 256 (258)
T ss_pred h
Confidence 4
No 363
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-34 Score=298.38 Aligned_cols=263 Identities=24% Similarity=0.346 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-++|++.+.||.|||+.||++.+..++..||+|++.+.. .+..+...+|+...++++|||+++++++.+...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~------ 91 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREE------ 91 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh------
Confidence 468999999999999999999999999999999998654 356778999999999999999999886543210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.......||++.|.. |+|.+.+... ..+++.+++.++.+|++||++
T Consensus 92 -----------------------------~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~ 142 (302)
T KOG2345|consen 92 -----------------------------KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEA 142 (302)
T ss_pred -----------------------------ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHH
Confidence 012456899999985 8999988643 359999999999999999999
Q ss_pred HHhCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--C
Q 001059 509 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--P 584 (1170)
Q Consensus 509 LHs~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~ 584 (1170)
||+.. ++||||||.|||+++++.++|.|||.++.....-..+..... -.+..+..-|.-|.|||.+.-+ .
T Consensus 143 lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~------lQe~a~e~Ct~pyRAPELf~vk~~~ 216 (302)
T KOG2345|consen 143 LHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALR------LQEWAEERCTIPYRAPELFNVKSHC 216 (302)
T ss_pred HhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHH------HHHHHHHhCCCcccCchheecccCc
Confidence 99998 999999999999999999999999999864221100000000 0011233467889999987643 3
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHH--HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQI--VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~--~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..+.++|||||||+||+|+. ||........ .+........+|... ..+..+.++|+.||+.||.+||++.+++.
T Consensus 217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 217 TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 47899999999999999984 8864433111 111122222334332 36778899999999999999999999987
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
+
T Consensus 296 ~ 296 (302)
T KOG2345|consen 296 K 296 (302)
T ss_pred H
Confidence 5
No 364
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-32 Score=311.38 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=192.6
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+|++.+.||+|+||.||+|.+.. ....+|+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----- 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----
Confidence 47888999999999999999753 2357888888643 333445678999999999999999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------------
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 487 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 487 (1170)
....|++|||++ ++|.+++...
T Consensus 75 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (290)
T cd05045 75 -----------------------------------DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119 (290)
T ss_pred -----------------------------------CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCc
Confidence 234689999997 6898887542
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 488 --DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 488 --~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
..+++..++.++.|++.||+|||++||+||||||+|||+++++.+||+|||+++....... ....
T Consensus 120 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~ 186 (290)
T cd05045 120 DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS-------------YVKR 186 (290)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc-------------hhcc
Confidence 2478889999999999999999999999999999999999999999999999976422110 0011
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~ 641 (1170)
....++..|+|||++.+ ..++.++||||||+++|||++ ||......... .... ....++.....+.++.+++.
T Consensus 187 ~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~ 263 (290)
T cd05045 187 SKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF-NLLK-TGYRMERPENCSEEMYNLML 263 (290)
T ss_pred cCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHh-CCCCCCCCCCCCHHHHHHHH
Confidence 22346778999999877 568999999999999999986 66554443322 2222 22222233456679999999
Q ss_pred HccCCCCCCCCCHHHHHhc
Q 001059 642 RLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~ 660 (1170)
+||+.+|.+||++.++++.
T Consensus 264 ~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 264 TCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHccCCcccCCCHHHHHHH
Confidence 9999999999999999863
No 365
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.3e-32 Score=305.92 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=187.0
Q ss_pred eeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----------- 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----------- 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-----------
Confidence 368999999999999753 3457999987532 2333456788999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....+++|||+. ++|.+++... ..+++..+..++.||+.||+|||+++++
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 69 ----------------------------EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred ----------------------------CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 234689999996 6999998754 3467788889999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.+||+|||+++......... ........+++.|+|||.+.+ ..++.++|||||
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~sl 188 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS-----------VHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSF 188 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCccee-----------ecccccCcCCccccChhHhcc-CccchHHHHHHH
Confidence 99999999999999999999999997543211000 001123356788999999877 568999999999
Q ss_pred HHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 596 GIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 596 GviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||++|||++ ||......+.... +. .+..++.....++.+.+++.+||..+|++||++.++++.
T Consensus 189 G~~l~el~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 189 GVLLWELMTRGAPPYPDVDSFDITVY-LL-QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999986 4443333332222 22 222232233456789999999999999999999999874
No 366
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-32 Score=311.12 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=204.2
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||.|+||.||+|.+. .+|..||+|+++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 4789999999999999999985 4789999999874322 122345678899999999 6999999997762
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++ ++|.+++.....+++..+..++.||+.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~ 120 (290)
T cd05613 76 -----------------------------------TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEH 120 (290)
T ss_pred -----------------------------------cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 587 (1170)
||++|++||||||+|||++.++.+||+|||++........ .......|+..|+|||.+.+. ..++
T Consensus 121 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (290)
T cd05613 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------ERAYSFCGTIEYMAPDIVRGGDGGHD 186 (290)
T ss_pred HHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc--------------cccccccCCcccCChhhccCCCCCCC
Confidence 9999999999999999999999999999999976432110 011235689999999998752 2467
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 656 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~e 656 (1170)
.++||||||+++|+|++ ||..... ......... . ..++.....++.+.+++.+||+.||.+|| ++++
T Consensus 187 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~ 264 (290)
T cd05613 187 KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL-K-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE 264 (290)
T ss_pred ccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh-c-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence 89999999999999997 6642211 111111111 1 11222334567899999999999999997 8999
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
++.|+|+....++.+
T Consensus 265 l~~~~~~~~~~~~~~ 279 (290)
T cd05613 265 IKKHPFFQKINWDDL 279 (290)
T ss_pred HHcCcccccCCHHHH
Confidence 999999999886544
No 367
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-32 Score=305.32 Aligned_cols=243 Identities=24% Similarity=0.350 Sum_probs=192.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------- 71 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS---------- 71 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc----------
Confidence 5689999999999999999998744 4699998764332 2456889999999999999999987751
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|++|||++ ++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~ 120 (260)
T cd05069 72 -------------------------------EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120 (260)
T ss_pred -------------------------------CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123589999997 58999987543 47899999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++||||||+||+++.++.++|+|||+++....... .......++..|+|||.+.+ ..++.++|
T Consensus 121 ~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~D 185 (260)
T cd05069 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (260)
T ss_pred CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc--------------cccCCCccchhhCCHHHhcc-CCcChHHH
Confidence 9999999999999999999999999999976532110 00122346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||++ ||......+..... .. ...++.....+..+.+++++||.+||.+||+++++++
T Consensus 186 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 186 VWSFGILLTELVTKGRVPYPGMVNREVLEQV-ER-GYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-Hc-CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999996 67654444333322 22 2222333456678999999999999999999999975
No 368
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6e-33 Score=309.93 Aligned_cols=235 Identities=16% Similarity=0.249 Sum_probs=180.0
Q ss_pred eeeccCCcEEEEEEEEccC------------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 361 QPLGHGGFGHVVLCKNKLD------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~t------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+.||+|+||.||+|++... ...+|+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec---
Confidence 3689999999999986422 2358889875432 2344578889999999999999999988743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
....+++|||+++ +|..++.. ...+++..++.++.||+.||
T Consensus 76 -------------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 76 -------------------------------------DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred -------------------------------------CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 2345899999974 77777664 35689999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCC-------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARND-------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~-------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
+|||++||+||||||+|||++.++. +|++|||++..... .....++..|+|||+
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~ 179 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------------------RQECVERIPWIAPEC 179 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-------------------cccccccccccChhh
Confidence 9999999999999999999987654 89999999865321 123467889999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
+.....++.++|||||||++|||++ ||......+.. .... ...+ .....++++.+||.+||+.||.+||++.
T Consensus 180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~ 255 (262)
T cd05077 180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE--GQCM-LVTPSCKELADLMTHCMNYDPNQRPFFR 255 (262)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh--cCcc-CCCCChHHHHHHHHHHcCCChhhCcCHH
Confidence 8754668999999999999999973 55443222211 1111 1111 1122346889999999999999999999
Q ss_pred HHHhc
Q 001059 656 ELLQD 660 (1170)
Q Consensus 656 eiL~~ 660 (1170)
+|+++
T Consensus 256 ~il~~ 260 (262)
T cd05077 256 AIMRD 260 (262)
T ss_pred HHHHh
Confidence 99975
No 369
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.7e-32 Score=306.73 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=196.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|.+.+.||.|+||.||+|.+... ...||||...... .....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 5688999999999999999998644 3468999876432 23445678999999999999999999987621
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 79 -----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l 123 (270)
T cd05056 79 -----------------------------------NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL 123 (270)
T ss_pred -----------------------------------CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23589999996 59999987644 589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.+||+|||+++....... ...+...+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (270)
T cd05056 124 ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--------------YKASKGKLPIKWMAPESINF-RRFTSA 188 (270)
T ss_pred HhCCeeccccChheEEEecCCCeEEccCceeeecccccc--------------eecCCCCccccccChhhhcc-CCCCch
Confidence 999999999999999999999999999999976532210 01122235578999999876 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+...... .+..++.....++++.++|.+||..+|.+|||+.+++..
T Consensus 189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999884 786665554443332 222333344567899999999999999999999999864
No 370
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-32 Score=314.18 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
++|.+.+.||+|+||.||+|++.. .+..+|+|.++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 578899999999999999998642 34579999886432 233456788999999999 69999999988732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CC
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 489 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 489 (1170)
...+|++|||++ ++|.+++... ..
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (314)
T cd05099 90 ---------------------------------------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130 (314)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence 345799999997 5999988653 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~ 197 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------KKTSNGR 197 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc-------------cccccCC
Confidence 788899999999999999999999999999999999999999999999999865321100 0011123
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
+++.|||||++.+ ..++.++|||||||++|||++ ||......+... .+. ....+......+.++.++|.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (314)
T cd05099 198 LPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK-LLR-EGHRMDKPSNCTHELYMLMRECWH 274 (314)
T ss_pred CCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 4568999999887 568999999999999999986 565443333322 222 222222334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.||.+|||+.++++.
T Consensus 275 ~~p~~Rps~~~ll~~ 289 (314)
T cd05099 275 AVPTQRPTFKQLVEA 289 (314)
T ss_pred CCcccCcCHHHHHHH
Confidence 999999999999864
No 371
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.6e-32 Score=302.43 Aligned_cols=245 Identities=24% Similarity=0.409 Sum_probs=193.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--------- 70 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 5778999988643332 3568899999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++|||++ ++|.+++... ..++++.++.++.|++.||+|||++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 71 -------------------------------RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred -------------------------------CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 5888888654 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+++||||||+||+++.++.+||+|||++........ .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv 184 (256)
T cd05112 120 NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWSSPEVFSF-SKYSSKSDV 184 (256)
T ss_pred CccccccccceEEEcCCCeEEECCCcceeecccCcc--------------cccCCCccchhhcCHhHhcc-CCcChHHHH
Confidence 999999999999999999999999999875421110 01122345678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|||++ ||........... +..... +......+..+.+|+.+||+.+|++|||+.+++++
T Consensus 185 ~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 185 WSFGVLMWEVFSEGKTPYENRSNSEVVET-INAGFR-LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HhCCCC-CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 999999999986 6655444333322 221111 11112345789999999999999999999999874
No 372
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.7e-32 Score=303.23 Aligned_cols=245 Identities=25% Similarity=0.365 Sum_probs=195.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. +++.||||.+...... ..++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSE-------- 72 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeec--------
Confidence 478999999999999999999986 5688999998754332 4578999999999999999999987622
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.... .+++..+..++.||+.||+|||
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh 120 (261)
T cd05034 73 --------------------------------EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE 120 (261)
T ss_pred --------------------------------CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 58999987643 6899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||||+||+++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------~~~~~~~~~~y~~PE~~~~-~~~~~~~ 185 (261)
T cd05034 121 SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------AREGAKFPIKWTAPEAANY-GRFTIKS 185 (261)
T ss_pred hCCcccCCcchheEEEcCCCCEEECccccceeccchhhh--------------hhhccCCCccccCHHHhcc-CCcCchh
Confidence 999999999999999999999999999999765321100 0112234678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|+|++ ||.............. .. .++.....++++.+++.+||+.+|.+||+++++++
T Consensus 186 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GY-RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99999999999996 6655444333333222 21 22222344678999999999999999999999975
No 373
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.1e-32 Score=306.09 Aligned_cols=245 Identities=24% Similarity=0.384 Sum_probs=185.0
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||.||+|.+. .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------------- 66 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE------------- 66 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------------
Confidence 36899999999999865 3456899998865432 2334578899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.... ..++..+..++.|++.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 67 ---------------------------VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred ---------------------------CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 345789999997 69999886432 356778889999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC------CC
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------KI 586 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~ 586 (1170)
|++||||||+||+++.++++||+|||+++...... .........|++.|+|||++.+.. .+
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED-------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQ 186 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc-------------eeecCCCcCCcccccCHhHhccccccccccCC
Confidence 99999999999999999999999999987432111 011122346788999999986421 35
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhc-CCC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQK-GEL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~-~~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+.++|||||||++|||++ ||......+......... ... |......++.+.++|.+|| .+|++|||+++|++
T Consensus 187 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 187 TKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 789999999999999985 776555444333222211 111 2222234567899999999 68999999999985
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 266 ~ 266 (269)
T cd05087 266 L 266 (269)
T ss_pred H
Confidence 3
No 374
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2e-32 Score=311.25 Aligned_cols=257 Identities=19% Similarity=0.308 Sum_probs=189.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhH---------HHHHHHHHHHHhccCCCceeEEEE
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVN---------DRILREVATLSRLQHQHVVRYYQA 422 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~---------~~~~~Ev~iL~~l~HpnIV~l~~~ 422 (1170)
++|++.+.||+|+||+||+|.+..+ +..+|+|+........... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6899999999999999999999877 6778888754433221110 112334455667799999999987
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
+.... ....+.|++|+++..++.+.+......++..++.++.||
T Consensus 92 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 135 (294)
T PHA02882 92 GSFKR------------------------------------CRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDM 135 (294)
T ss_pred eeEec------------------------------------CCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHH
Confidence 63210 112356889999988888877766667899999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.||+|||+++|+||||||+|||++.++.++|+|||+|+.+........ ..........||+.|+|||++.+
T Consensus 136 ~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~--------~~~~~~~~~~gt~~y~ape~~~~ 207 (294)
T PHA02882 136 LTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIE--------YSKEQKDLHRGTLYYAGLDAHNG 207 (294)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccc--------cccccccccCCCccccCHHHhCC
Confidence 9999999999999999999999999999999999999986532210000 00011233479999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHH--------HHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV--------LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~--------~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
..++.++|||||||++|||++ ||......... ...+. .+.. .....++++.++++.|+..+|.+|
T Consensus 208 -~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~r 283 (294)
T PHA02882 208 -ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH-EGKI--KIKNANKFIYDFIECVTKLSYEEK 283 (294)
T ss_pred -CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh-hhhh--ccCCCCHHHHHHHHHHHhCCCCCC
Confidence 568999999999999999996 88655221111 11111 1111 123345789999999999999999
Q ss_pred CCHHHHHh
Q 001059 652 PSATELLQ 659 (1170)
Q Consensus 652 Pta~eiL~ 659 (1170)
|++.++++
T Consensus 284 p~~~~l~~ 291 (294)
T PHA02882 284 PDYDALIK 291 (294)
T ss_pred CCHHHHHH
Confidence 99999986
No 375
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=3e-32 Score=300.87 Aligned_cols=241 Identities=23% Similarity=0.323 Sum_probs=189.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
+.||.|+||.||+|... ++..||+|.++... .......+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 63 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--------------- 63 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec---------------
Confidence 36899999999999865 78899999886432 33344578899999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+++|||++ ++|.+++... ..+++..++.++.|++.||.|||++|++|||
T Consensus 64 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d 118 (250)
T cd05085 64 -------------------------RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRD 118 (250)
T ss_pred -------------------------CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 345799999996 5898887653 4589999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+||+++.++.+||+|||++........ .......+++.|+|||++.+ ..++.++||||||++
T Consensus 119 l~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~l 183 (250)
T cd05085 119 LAARNCLVGENNVLKISDFGMSRQEDDGIY--------------SSSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGIL 183 (250)
T ss_pred cChheEEEcCCCeEEECCCccceecccccc--------------ccCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHH
Confidence 999999999999999999999875321110 00112244678999999987 568999999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|+|++ ||............ . ...........++.+.+++.+||+.+|.+||++.++++.
T Consensus 184 l~~~~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 184 LWETFSLGVCPYPGMTNQQAREQV-E-KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999986 77655443332222 2 222223334566799999999999999999999999874
No 376
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=9.3e-33 Score=310.61 Aligned_cols=234 Identities=18% Similarity=0.270 Sum_probs=181.0
Q ss_pred eeccCCcEEEEEEEEccCC------------------------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCce
Q 001059 362 PLGHGGFGHVVLCKNKLDG------------------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg------------------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV 417 (1170)
.||+|+||.||+|.+..++ ..||+|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 6999999999999864322 358899875432 23446788999999999999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHH
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELA 495 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~ 495 (1170)
++++++.+ ....|+|||||+ ++|..++.. .+.+++..+
T Consensus 80 ~~~~~~~~----------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 119 (274)
T cd05076 80 FVHGVCVR----------------------------------------GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWK 119 (274)
T ss_pred eEEEEEEe----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCCCHHHH
Confidence 99998743 345689999997 478887765 456899999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC-------CEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 496 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 496 ~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
..++.||+.||+|||++||+||||||+|||++.++ .+|++|||++..... ....
T Consensus 120 ~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-------------------~~~~ 180 (274)
T cd05076 120 ITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-------------------REER 180 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------------------cccc
Confidence 99999999999999999999999999999997643 389999998864311 1223
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+++.|+|||.+.+...++.++|||||||++|||++ ||......+.. .........|. ...+++.++|.+||
T Consensus 181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~li~~cl 256 (274)
T cd05076 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE---PSCKELATLISQCL 256 (274)
T ss_pred ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC---CCChHHHHHHHHHc
Confidence 577889999998765568999999999999999962 66544333221 11222222232 23468999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.+|.+|||+.+++++
T Consensus 257 ~~~p~~Rps~~~il~~ 272 (274)
T cd05076 257 TYEPTQRPSFRTILRD 272 (274)
T ss_pred ccChhhCcCHHHHHHh
Confidence 9999999999999975
No 377
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.9e-32 Score=312.50 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|+..+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLS---- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC----
Confidence 4688999999999999999999987776 46888876432 22334568899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++++||++ |+|.+.+.... .+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 123 (303)
T cd05110 81 -------------------------------------PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMM 123 (303)
T ss_pred -------------------------------------CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 12468899997 68998887644 5899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||.+.+ ..++
T Consensus 124 ~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (303)
T cd05110 124 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------------EYNADGGKMPIKWMALECIHY-RKFT 189 (303)
T ss_pred HHhhcCeeccccccceeeecCCCceEEccccccccccCccc-------------ccccCCCccccccCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001123356788999999887 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||........ ...+. .+..++.....+..+.+++.+||..+|++||++.++++.
T Consensus 190 ~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 190 HQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLE-KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999975 6654433222 22222 333333334456789999999999999999999999875
No 378
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.4e-32 Score=306.03 Aligned_cols=239 Identities=23% Similarity=0.354 Sum_probs=185.8
Q ss_pred eeccCCcEEEEEEEEccCCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
.||+|+||.||+|+++.+|. .+|+|.++. .......+.+.+|+.+++++ +||||+++++++..
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------------- 67 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------------- 67 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------------
Confidence 68999999999999988876 468887752 23334456788999999999 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCHHHHHHHHHH
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKELAWHLFRQ 501 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~~~~i~~q 501 (1170)
...+|++|||++ ++|.+++.... .++++.++.++.|
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 68 ---------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred ---------------------------CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 235699999997 69999886532 4788999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
++.||+|||++|++||||||+|||++.++.+||+|||++...... ........++.|+|||++.
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~----------------~~~~~~~~~~~y~apE~~~ 184 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh----------------hhccCCCCccccCChHHHc
Confidence 999999999999999999999999999999999999998632100 0011123466899999987
Q ss_pred CCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+ ..++.++|||||||++|||++ ||............ . ....+......+.++.+++.+||+.||.+|||+.++
T Consensus 185 ~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 185 Y-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-P-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred c-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-h-CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 6 568999999999999999985 77544333332222 2 111222233456789999999999999999999999
Q ss_pred Hhc
Q 001059 658 LQD 660 (1170)
Q Consensus 658 L~~ 660 (1170)
++.
T Consensus 262 l~~ 264 (270)
T cd05047 262 LVS 264 (270)
T ss_pred HHH
Confidence 864
No 379
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.4e-32 Score=305.46 Aligned_cols=244 Identities=24% Similarity=0.383 Sum_probs=182.9
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
++||+|+||+||+|.... ....+|+|.+... ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~------------- 66 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE------------- 66 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-------------
Confidence 369999999999997542 3457888877533 233345678899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++.... ..++..+..++.||+.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (269)
T cd05042 67 ---------------------------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119 (269)
T ss_pred ---------------------------CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 345799999997 59999886543 246788899999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC------CCCC
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WPKI 586 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~~ 586 (1170)
||+||||||+|||++.++.+||+|||++........ ........+++.|+|||++.. ...+
T Consensus 120 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05042 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQ 186 (269)
T ss_pred CEecccccHhheEecCCCcEEEeccccccccccchh-------------eeccCCCCCcccccCHHHHhhcccccccccc
Confidence 999999999999999999999999999875321110 001123356788999998753 1346
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcC-CC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKG-EL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~-~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+.++|||||||++|||++ ||....+.+.......... .+ |......++...+++..|| .||++|||+++++.
T Consensus 187 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 187 TKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred chhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 889999999999999996 6655544444333333221 11 2222345667888999998 59999999999986
No 380
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.4e-32 Score=300.73 Aligned_cols=245 Identities=25% Similarity=0.341 Sum_probs=195.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++.+.||.|+||.||+|.+..++ ..||+|+++... .......+.+|+..++.++||||+++++.+.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTE------- 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------
Confidence 356789999999999999998766 899999986432 22245688999999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++|||++ ++|.+++..... +++..++.++.||+.||+||
T Consensus 73 ---------------------------------~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 73 ---------------------------------EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred ---------------------------------CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999997 599999876544 99999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+.|++||||||+||+++.++.++|+|||+++........ ......+++.|+|||.+.+ ..++.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~ 184 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--------------KKKGGKLPIRWMAPESLKD-GKFTSK 184 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc--------------ccccCCCcccccChHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865322110 0011237889999999866 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+||||||+++|+|++ ||............. ....++.....+.++.+++.+||+.||.+|||+.++++
T Consensus 185 ~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 185 SDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK--KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999985 555433333332222 22233333446789999999999999999999999986
No 381
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-32 Score=315.73 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
.+|++.+.||+|+||.||+|++... +..||+|.++.. ........+.+|+.+++++ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 4689999999999999999987532 236899988643 2333456789999999999 89999999988732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------C
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 489 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 489 (1170)
...+|++|||++ ++|.+++.... .
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 130 (334)
T cd05100 90 ---------------------------------------DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130 (334)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999997 59999886532 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
++...+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........
T Consensus 131 l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~ 197 (334)
T cd05100 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-------------YKKTTNGR 197 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------cccccCCC
Confidence 77788999999999999999999999999999999999999999999999976432110 00112234
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
++..|+|||++.+ ..++.++|||||||++|||++ ||......... ..+. ....++.....+.++.++|.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (334)
T cd05100 198 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGHRMDKPANCTHELYMIMRECWH 274 (334)
T ss_pred cCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHH-cCCCCCCCCCCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 56544433332 2222 222223334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.+|.+|||+.+++++
T Consensus 275 ~~p~~Rps~~ell~~ 289 (334)
T cd05100 275 AVPSQRPTFKQLVED 289 (334)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999975
No 382
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.1e-32 Score=304.63 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=195.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+|++.+.||+|+||+||+|.++.+|. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 688999999999999999999887765 58999876432 33445678999999999999999999988731
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 81 ------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 124 (279)
T cd05057 81 ------------------------------------SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSY 124 (279)
T ss_pred ------------------------------------CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 35689999996 6999988764 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+|||++.++.+||+|||+++.+..... ........++..|+|||.+.. ..++.
T Consensus 125 LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (279)
T cd05057 125 LEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 190 (279)
T ss_pred HHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc-------------ceecCCCcccccccCHHHhhc-CCcCc
Confidence 9999999999999999999999999999999986532110 001112234678999999876 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|+|||||++||+++ ||......+... .+. .+...+.....+.++.+++.+||..||.+||++.++++
T Consensus 191 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 191 KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD-LLE-KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-HHh-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999986 665544433332 222 22222223345678999999999999999999999975
No 383
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2e-32 Score=303.41 Aligned_cols=233 Identities=19% Similarity=0.305 Sum_probs=183.3
Q ss_pred eeeccCCcEEEEEEEEccCC----------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 361 QPLGHGGFGHVVLCKNKLDG----------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg----------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+.||+|+||.||+|.+..++ ..+++|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 36899999999999998776 35788877543321 5678999999999999999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+++|||++ ++|.+++.... .++...+..++.||+.||+|
T Consensus 73 ------------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 73 ------------------------------------DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred ------------------------------------CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 23589999997 58999887665 79999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC-------CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||++||+||||||+|||++.++ .+||+|||++..... .....++..|+|||++.
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~~~~~~~~y~aPE~~~ 177 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------------------REERVERIPWIAPECIR 177 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-------------------ccccccCCCccChhhhc
Confidence 9999999999999999999887 799999999986421 12235677899999988
Q ss_pred CC-CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 582 GW-PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 582 ~~-~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+. ..++.++|||||||++|||++ ||......... .........+.. ....+.++|.+||..+|.+|||+.+
T Consensus 178 ~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 178 NGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-RFYQDQHRLPMP---DCAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH-HHHhcCCCCCCC---CchHHHHHHHHHhccChhhCCCHHH
Confidence 74 368999999999999999986 45443222211 111112222211 1268899999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+++.
T Consensus 254 il~~ 257 (259)
T cd05037 254 ILRD 257 (259)
T ss_pred HHHh
Confidence 9874
No 384
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.1e-32 Score=299.15 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=190.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|+.++++++||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------------- 63 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--------------- 63 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec---------------
Confidence 469999999999999986 999999988754332 345678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....|++|||++ ++|.+++.. ...++...+..++.|++.||+|||+++++|||
T Consensus 64 -------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 64 -------------------------KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred -------------------------CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 346799999996 589988865 34688999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||++........ ........++..|+|||++.+ ..++.++|||||||+
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 184 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSREEEGGIY-------------TVSDGLKQIPIKWTAPEALNY-GRYTSESDVWSYGIL 184 (251)
T ss_pred cCcceEEEcCCCcEEEeeccccccccCCcc-------------eeccccCcceeccCChHhhcc-CCCCcchhHHHHHHH
Confidence 999999999999999999999975431110 001112234677999999887 568999999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||++ ||........... +. ....++.....+.++.++|.+||+.+|.+|||+.++++.
T Consensus 185 ~~~l~t~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 185 LWETFSLGDTPYPGMSNQQTRER-IE-SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred HHHHHhccCCCCccCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 999996 5654433322222 22 112222233456789999999999999999999999874
No 385
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.2e-32 Score=306.02 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+|++.+.||+|+||.||+|.+.. ++..||||+++..... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP---- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC----
Confidence 467888999999999999999753 4889999999754433 3466899999999999999999999876331
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~ 124 (284)
T cd05038 79 ----------------------------------GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDY 124 (284)
T ss_pred ----------------------------------CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHH
Confidence 1356799999996 59999987654 59999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+|||++.++.++|+|||++......... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~Pe~~~~-~~~~~ 191 (284)
T cd05038 125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY------------YYVKEPGESPIFWYAPECLRT-SKFSS 191 (284)
T ss_pred HHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc------------eeccCCCCCcccccCcHHHcc-CCCCc
Confidence 99999999999999999999999999999999865321100 000112345667999999877 46889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH--------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER--------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~--------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
++||||||+++|||++ ||...... ......+. .....+.....+.++.+++.+||+.+|.+|
T Consensus 192 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 192 ASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred ccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhC
Confidence 9999999999999997 54432111 11111222 222222233455789999999999999999
Q ss_pred CCHHHHHhc
Q 001059 652 PSATELLQD 660 (1170)
Q Consensus 652 Pta~eiL~~ 660 (1170)
||+.++++.
T Consensus 271 pt~~ei~~~ 279 (284)
T cd05038 271 PSFADLILI 279 (284)
T ss_pred CCHHHHHHH
Confidence 999999864
No 386
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6.5e-32 Score=302.32 Aligned_cols=244 Identities=21% Similarity=0.363 Sum_probs=183.3
Q ss_pred eeccCCcEEEEEEEEccCC--cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDG--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
.||+|+||+||+|....++ ..+++|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------------- 66 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------------- 66 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecC--------------
Confidence 6999999999999865332 346677665432 23345689999999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|++||||+ ++|.+++... ..+++..++.++.||+.||+|||++++
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 120 (268)
T cd05086 67 --------------------------AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF 120 (268)
T ss_pred --------------------------CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 345799999997 5999988753 236677788999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC------CCCCc
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW------PKIDE 588 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~~~~ 588 (1170)
+||||||+|||++.++.+||+|||++........ ........|++.|+|||++... ..++.
T Consensus 121 ~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 187 (268)
T cd05086 121 LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTK 187 (268)
T ss_pred eccCCccceEEEcCCccEEecccccccccCcchh-------------hhcccCCcCcccccCchhcccccCccccCCCCC
Confidence 9999999999999999999999999864211100 0112345788999999987531 23578
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCC---CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGE---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~---~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||....+.+.....+..... .|......++.+.+++..|| .+|++||++.++++.
T Consensus 188 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 188 PSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 9999999999999985 77655554444433332211 12223345678889999999 679999999999863
No 387
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=2.6e-32 Score=303.34 Aligned_cols=249 Identities=29% Similarity=0.452 Sum_probs=195.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~---~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|.+.+.||+|+||.||++.+..++..+++|+++.. .........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE------- 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------
Confidence 478899999999999999999887777777776532 2222334567789999999999999999877632
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+++|||++ ++|.+++.. ...+++..++.++.|++.||.
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 74 ---------------------------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred ---------------------------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 345799999997 488887753 346999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|++|+||||+||+++. +.+||+|||++........ ......|++.|+|||.+.+ ..++
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~ 183 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD---------------LATTFTGTPYYMSPEALKH-QGYD 183 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcc---------------cccCCCCCcCccCHHHHcc-CCCC
Confidence 999999999999999999975 6799999999876532110 1123468889999999876 5578
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|+||||+++|+|++ ||............. .+..+......++++.++|.+||..+|++||++.++++|||+
T Consensus 184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 184 SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 89999999999999996 665444333333322 233333334556789999999999999999999999999996
No 388
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.7e-32 Score=307.23 Aligned_cols=259 Identities=28% Similarity=0.431 Sum_probs=202.3
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCC--hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~--~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||+|+||.||+|.+. .++..||||+++..... ......+.+|+.++.++ +||||+++++++.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 4889999999999999999864 46789999998743221 22345688999999999 6999999987762
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+||||++ ++|.+.+.....+++..++.++.|++.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~ 120 (288)
T cd05583 76 -----------------------------------TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDH 120 (288)
T ss_pred -----------------------------------cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999998877789999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-CCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~ 587 (1170)
||+.|++||||||+||+++.++.++|+|||+++...... ........|++.|+|||.+.+.. ..+
T Consensus 121 lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (288)
T cd05583 121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE--------------EERAYSFCGTIEYMAPEVIRGGSGGHD 186 (288)
T ss_pred HHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc--------------ccccccccCCccccCHHHhcCCCCCCc
Confidence 999999999999999999999999999999987643211 00112346899999999987632 368
Q ss_pred ccchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATEL 657 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~ei 657 (1170)
.++||||||+++|||++ ||.... ..+......... ++.....++.+.++|.+||+.||++||| +.++
T Consensus 187 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~ 263 (288)
T cd05583 187 KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEI 263 (288)
T ss_pred chhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence 89999999999999997 664221 112222222212 2223345678999999999999999998 5677
Q ss_pred HhccCCCCchHHHH
Q 001059 658 LQDALPPQMEYELL 671 (1170)
Q Consensus 658 L~~~~~~~~~~~~~ 671 (1170)
|+|+|+....++.+
T Consensus 264 l~~~~~~~~~~~~~ 277 (288)
T cd05583 264 KNHPFFQGIDWDDL 277 (288)
T ss_pred hcCcccccCCHHHH
Confidence 99999999887544
No 389
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.6e-32 Score=302.12 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=193.3
Q ss_pred ceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
|.+.+.||+|+||.||+|.++. +++.||||++..........+++.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA----- 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC-----
Confidence 5677899999999999998753 57899999997655455556778999999999999999999987743210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc------CCCCHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qI~~gL 506 (1170)
.......+++++|+. ++|.+++... ..++...++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l 126 (273)
T cd05074 76 -----------------------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126 (273)
T ss_pred -----------------------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 001234578899996 6888776421 2478899999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+||+++.++.+||+|||+++....... ........+++.|++||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05074 127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY-------------YRQGCASKLPVKWLALESLAD-NVY 192 (273)
T ss_pred HHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc-------------eecCCCccCchhhcCHhHHhc-Ccc
Confidence 999999999999999999999999999999999986532110 001122345678999999887 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||.............. ...+......++.+.+++.+||+.+|++||++.+++++
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK--GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 899999999999999986 5554433333222222 22222223456789999999999999999999999875
No 390
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=4.5e-32 Score=298.92 Aligned_cols=242 Identities=32% Similarity=0.473 Sum_probs=198.2
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||.|+||.||++.+..+++.||+|++...... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----------------- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----------------- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----------------
Confidence 69999999999999988999999998754332 224557889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+|++|||+ +++|.+++.....+++..++.++.||+.||.|||+++++|+|||
T Consensus 64 -----------------------~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 64 -----------------------TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred -----------------------cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 246789999999 56999999887789999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ...+.++|+||||+++|
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~ 184 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSSEG---------------SRTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLY 184 (250)
T ss_pred cceEEEcCCCcEEEeecCcceecccCC---------------CcccCCcCCccccChHHhCC-CCCCchhhHHHHHHHHH
Confidence 999999999999999999998653211 01233468889999999887 45788999999999999
Q ss_pred Hhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---HHHHhccCC
Q 001059 601 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALP 663 (1170)
Q Consensus 601 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta---~eiL~~~~~ 663 (1170)
+|++ ||..................+| ...+..+.++|++||..||.+||++ +++++|+||
T Consensus 185 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 185 EMLTGKPPFYAEDRKEIYEKILKDPLRFP---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9997 7765544333333333222222 2336789999999999999999999 999999997
No 391
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-33 Score=322.20 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=207.0
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccC-Cc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLD-GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~t-g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
..-+-.++..+.++||+|.||.|++|.|... |+ .||||+++..... ....+|++|+.+|.+|+|||++++||....
T Consensus 104 kclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 104 KCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD 182 (1039)
T ss_pred ceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence 3333456677889999999999999999743 33 5999999754333 267899999999999999999999998632
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQI 502 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI 502 (1170)
..+.+|||+|+ |+|.+.|+. ...|.......|+.||
T Consensus 183 -----------------------------------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~Qi 221 (1039)
T KOG0199|consen 183 -----------------------------------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQI 221 (1039)
T ss_pred -----------------------------------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHH
Confidence 34579999997 799999987 3458888999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.||.||.++++|||||-.+|+|+-....|||||||+.+.+...+.. ........-...|+|||.+..
T Consensus 222 A~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~------------Yvm~p~rkvPfAWCaPEsLrh 289 (1039)
T KOG0199|consen 222 AKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM------------YVMAPQRKVPFAWCAPESLRH 289 (1039)
T ss_pred HHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc------------eEecCCCcCcccccCHhHhcc
Confidence 99999999999999999999999999999999999999987543211 111122234568999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||+|||++|||++ ||.+....+++..+- .+...+....++.++.++++.||..+|.+|||+..|.
T Consensus 290 -~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD--~~erLpRPk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 290 -RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID--AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred -ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc--ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 679999999999999999997 888777766655443 4444455566788999999999999999999999997
Q ss_pred hc
Q 001059 659 QD 660 (1170)
Q Consensus 659 ~~ 660 (1170)
..
T Consensus 367 ~~ 368 (1039)
T KOG0199|consen 367 ED 368 (1039)
T ss_pred Hh
Confidence 54
No 392
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-31 Score=297.81 Aligned_cols=244 Identities=25% Similarity=0.349 Sum_probs=193.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+|+.+++.++|+||+++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------
Confidence 578999999999999999999865 56679999876432 234678899999999999999999877621
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...|++|||++ ++|.+++... ..++...++.++.||+.||.|||
T Consensus 73 ---------------------------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 73 ---------------------------------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred ---------------------------------CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 34689999997 5999998753 35788899999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.|++||||||+||+++.++.+||+|||++..+..... .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~ 184 (260)
T cd05073 120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 184 (260)
T ss_pred hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--------------ccccCCcccccccCHhHhcc-CCcCccc
Confidence 99999999999999999999999999999976432110 01122346678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|+|||||++|+|++ ||........... +. .....+.....+.++.+++.+||+.+|.+||++.++++
T Consensus 185 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 185 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred cchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-Hh-CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999997 7765444333222 22 22222333456678999999999999999999999875
No 393
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.9e-32 Score=299.66 Aligned_cols=239 Identities=24% Similarity=0.373 Sum_probs=190.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||++.. +++.||+|+++... ....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 70 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH-------- 70 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--------
Confidence 36799999999999999999864 68899999986422 24578899999999999999999987622
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 71 ---------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (254)
T cd05083 71 ---------------------------------NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE 117 (254)
T ss_pred ---------------------------------CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23589999997 59999987543 4889999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||++...... ......+..|+|||.+.+ ..++.++
T Consensus 118 ~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~~~~y~~pe~~~~-~~~~~~~ 178 (254)
T cd05083 118 SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG------------------VDNSKLPVKWTAPEALKH-KKFSSKS 178 (254)
T ss_pred hCCeeccccCcceEEEcCCCcEEECCCccceecccc------------------CCCCCCCceecCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998753211 011234567999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+... .+. .+..++.....++.+.+++.+||+.+|.+||++.+++..
T Consensus 179 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 179 DVWSYGVLLWEVFSYGRAPYPKMSLKEVKE-CVE-KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred hHHHHHHHHHHHHhCCCCCCccCCHHHHHH-HHh-CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999985 665544433322 222 222222234566789999999999999999999999863
No 394
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.7e-32 Score=301.42 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=188.0
Q ss_pred eeccCCcEEEEEEEEccCC------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDG------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.||+|+||.||+|+++..+ ..||||.+... ........+.+|+.+++.++||||++++++|..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL---------- 70 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC----------
Confidence 6899999999999987443 68999988643 222345678899999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....|++|||++ ++|.+++... ..+++..+..++.||+.||+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 71 ------------------------------NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred ------------------------------CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 345799999997 5999888642 23788999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCC-----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|||+++++|+||||+|||++.++ .+||+|||+++........ .......++..|+|||++.+
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~ 187 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-------------RKEGEGLLPVRWMAPESLLD 187 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccc-------------ccCcccCCCccccCHHHHcc
Confidence 99999999999999999999877 8999999999865322110 01122356788999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|||++ ||......+..... . ....+......++.+.++|.+||..+|.+||++.+++
T Consensus 188 -~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 264 (269)
T cd05044 188 -GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-T-AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQ 264 (269)
T ss_pred -CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-h-cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 568999999999999999985 66544443333222 2 1222233345567899999999999999999999997
Q ss_pred hc
Q 001059 659 QD 660 (1170)
Q Consensus 659 ~~ 660 (1170)
+.
T Consensus 265 ~~ 266 (269)
T cd05044 265 EI 266 (269)
T ss_pred HH
Confidence 63
No 395
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=312.23 Aligned_cols=245 Identities=23% Similarity=0.314 Sum_probs=202.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+.....+||.|.||.||.|.|+.-.-.||||.++- +....++|+.|..+|+.++|||+|+++|+|.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT----------- 333 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----------- 333 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhc-----------
Confidence 55667899999999999999998889999998863 2234678999999999999999999999983
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|||+|||. |+|.++|+++.+ ++.-..+.++.||.+||+||..+
T Consensus 334 -----------------------------~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 334 -----------------------------HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred -----------------------------cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 2456899999985 899999988764 66667788999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
++|||||-.+|+|+.++..|||+|||++++...+.+. .+-+..-..-|.|||-|.- ..++.|+||
T Consensus 385 nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT--------------AHAGAKFPIKWTAPEsLAy-NtFSiKSDV 449 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NTFSIKSDV 449 (1157)
T ss_pred hhhhhhhhhhhccccccceEEeeccchhhhhcCCcee--------------cccCccCcccccCcccccc-cccccchhh
Confidence 9999999999999999999999999999987543321 1122234567999998876 678999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|+|||+|||+.| ||.+-.-.+. ..+.+++........+++....||+.||+.+|.+||++.+|-+.
T Consensus 450 WAFGVLLWEIATYGMsPYPGidlSqV--Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa 519 (1157)
T KOG4278|consen 450 WAFGVLLWEIATYGMSPYPGIDLSQV--YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQA 519 (1157)
T ss_pred HHHHHHHHHHHhcCCCCCCCccHHHH--HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence 999999999986 7655443332 23344666666677889999999999999999999999998653
No 396
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-32 Score=322.11 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=208.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+...+.++||.|.||+|++|+.+..|+ .||||.++.. .+.....+|+.|..+|-+++||||+++.|+..
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT------ 700 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT------ 700 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe------
Confidence 4566788999999999999999997775 6999999854 34455678999999999999999999998762
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+.||+|||. |+|..+|+.+ +.|+.-+..-+++.|+.||+|
T Consensus 701 ----------------------------------ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkY 746 (996)
T KOG0196|consen 701 ----------------------------------KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKY 746 (996)
T ss_pred ----------------------------------cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHH
Confidence 2456789999996 7999999865 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
|-++|+|||||-.+|||++.+..+|++|||+++.+..+. ... ....+..-..+|.|||++.- .+++.
T Consensus 747 Lsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~---~~~---------ytt~GGKIPiRWTAPEAIa~-RKFTs 813 (996)
T KOG0196|consen 747 LSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EAA---------YTTLGGKIPIRWTAPEAIAY-RKFTS 813 (996)
T ss_pred HhhcCchhhhhhhhheeeccceEEEeccccceeecccCC---Ccc---------ccccCCccceeecChhHhhh-cccCc
Confidence 999999999999999999999999999999999874332 011 11122234578999999987 67999
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||+|||.++ ||+...+.+.... +.+..++|+ +.+++..+..||..||++|-..||.+.||+..
T Consensus 814 ASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka-Ie~gyRLPp-PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 814 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA-IEQGYRLPP-PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred hhhccccceEEEEecccCCCcccccchHHHHHH-HHhccCCCC-CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 9999999999999996 9888777655544 444455554 45678899999999999999999999999875
No 397
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-33 Score=296.08 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++++-+..||.|+||+|+|..++.+|+..|||.|+.... .....+++.|.....+- +.||||++||+++..
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E------- 135 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE------- 135 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-------
Confidence 455567889999999999999999999999999987654 34567888888876555 789999999998543
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...||.||+|+-||..+.. +...++|...-.+...++.||.|
T Consensus 136 ---------------------------------GdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 136 ---------------------------------GDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred ---------------------------------CceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 2359999999987765543 34569999999999999999999
Q ss_pred HHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-C
Q 001059 509 IHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 586 (1170)
Q Consensus 509 LHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~ 586 (1170)
|-. ..|||||+||+|||++..|.+||||||++-.+... +..+.-.|-..|||||.+..... |
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------iAkT~daGCrpYmAPERi~p~~~gy 246 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------IAKTVDAGCRPYMAPERIDPSDKGY 246 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH----------------HHhhhccCCccccChhccCCccCCc
Confidence 986 47999999999999999999999999999876322 22344578889999999876544 9
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-----CccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-----~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
+-++|+|||||+|||+.| |+..++..-..+..+. .+..| ....+.+..+..+|..||.+|-+.||...+++
T Consensus 247 DiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 247 DIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred chhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 999999999999999998 7766665333333222 22222 22244677899999999999999999999999
Q ss_pred hccCCCCc
Q 001059 659 QDALPPQM 666 (1170)
Q Consensus 659 ~~~~~~~~ 666 (1170)
.++|..-.
T Consensus 326 ~~~fyr~y 333 (361)
T KOG1006|consen 326 KFPFYRMY 333 (361)
T ss_pred cCchhhhh
Confidence 99876544
No 398
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.98 E-value=1.7e-31 Score=298.28 Aligned_cols=247 Identities=30% Similarity=0.511 Sum_probs=194.1
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCC--------CChhhHHHHHHHHHHHHh-ccCCCceeEEEEEee
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKD--------KSLPVNDRILREVATLSR-LQHQHVVRYYQAWFE 425 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~--------~~~~~~~~~~~Ev~iL~~-l~HpnIV~l~~~~~e 425 (1170)
+|++.+.||+|+||.||+|.++. +++.+|+|.+.... .......++.+|+.++++ ++||||+++++.+.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 68899999986432 122234567789988875 799999999988732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFR 500 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~ 500 (1170)
....|++|||+++ +|.+++.. ...+++..++.++.
T Consensus 81 ----------------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 120 (269)
T cd08528 81 ----------------------------------------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120 (269)
T ss_pred ----------------------------------------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 3568999999974 88877642 34689999999999
Q ss_pred HHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 501 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 501 qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
|++.||.|||+ .+++|+||||+|||++.++.+||+|||++....... ......|+..|+|||.
T Consensus 121 ~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~Pe~ 184 (269)
T cd08528 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES----------------KLTSVVGTILYSCPEI 184 (269)
T ss_pred HHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc----------------ccccccCcccCcChhh
Confidence 99999999996 789999999999999999999999999997643211 1234568999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+.+ ..++.++||||||+++|+|++ ||.............. ....|......++++.++|.+||+.||++||++.+
T Consensus 185 ~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 185 VKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred hcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh-ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 987 568999999999999999997 7655443333222222 21122222245679999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+..+
T Consensus 263 ~~~~ 266 (269)
T cd08528 263 VSAM 266 (269)
T ss_pred HHHH
Confidence 9764
No 399
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-32 Score=323.67 Aligned_cols=260 Identities=22% Similarity=0.384 Sum_probs=213.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+-|++.++||.|.+|+||+++++.+|+..|+|+...... ..+++.-|.++|+.. +|||++.+|++|.-..
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~------ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD------ 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEec------
Confidence 568999999999999999999999999999999875332 345677788999888 7999999999985421
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+.+|+|||||+ ||.-+++.. ..++.|+.+..|++.++.|+.|||
T Consensus 90 -----------------------------~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 90 -----------------------------PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred -----------------------------CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence 124678999999997 577777753 456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC----CC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----KI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~ 586 (1170)
.+.++|||||-.|||++.++.|||+|||.+..+... .....+.+|||.|||||++.... .|
T Consensus 141 ~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------------~grRnT~iGtP~WMAPEViac~e~~d~ty 205 (953)
T KOG0587|consen 141 NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------------VGRRNTFIGTPYWMAPEVIACDESPDATY 205 (953)
T ss_pred hcceeeecccCceEEEeccCcEEEeeeeeeeeeecc---------------cccccCcCCCcccccceeeecccCCCCCc
Confidence 999999999999999999999999999999876422 12345679999999999987543 37
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+..+|+|||||+..||.- |+.+.+++..+..+.+..+.-...+...+.++.+||..||.+|-.+||+..++|+|||.
T Consensus 206 d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 206 DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred ccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 889999999999999984 77777777766655443222222344556689999999999999999999999999998
Q ss_pred CCch
Q 001059 664 PQME 667 (1170)
Q Consensus 664 ~~~~ 667 (1170)
+...
T Consensus 286 ~e~~ 289 (953)
T KOG0587|consen 286 TEQP 289 (953)
T ss_pred cccc
Confidence 7543
No 400
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3e-32 Score=303.90 Aligned_cols=265 Identities=25% Similarity=0.378 Sum_probs=199.6
Q ss_pred CCCCCCCCCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCce
Q 001059 340 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVV 417 (1170)
Q Consensus 340 ~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV 417 (1170)
++++..+.+.+.....+..+++.||+|.||+||+|+|+ |+.||||++...+ .....||.++... |+|+||+
T Consensus 196 GSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENIL 268 (513)
T KOG2052|consen 196 GSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENIL 268 (513)
T ss_pred CCCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhh
Confidence 34444445556666788999999999999999999998 9999999997543 3456677777665 4999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHH
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAW 496 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~ 496 (1170)
.++++= +++.| .-..+|+|++|.+ |||.++|.+ ..++.....
T Consensus 269 gFIaaD------------~~~~g------------------------s~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml 311 (513)
T KOG2052|consen 269 GFIAAD------------NKDNG------------------------SWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGML 311 (513)
T ss_pred hhhhcc------------ccCCC------------------------ceEEEEEeeecccCCcHHHHHhh-ccCCHHHHH
Confidence 988552 22222 2468999999997 899999988 679999999
Q ss_pred HHHHHHHHHHHHHHhC--------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 497 HLFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~--------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
+++..++.||+|||-. .|.|||||+.|||+..++.+.|+|+|+|-..... ........+..
T Consensus 312 ~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~-----------t~~idi~~N~r 380 (513)
T KOG2052|consen 312 KLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD-----------TDTIDIPPNPR 380 (513)
T ss_pred HHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc-----------CCcccCCCCCc
Confidence 9999999999999952 4999999999999999999999999999865322 12233445678
Q ss_pred ccCccCCCcccccCCCC-----CCccchhHHHHHHHHHhhc-------------CCCchhH-------HHHHHHHhhhcC
Q 001059 569 VGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAME-------RQIVLSDLKQKG 623 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~-----~~~ksDIwSlGviL~ELlt-------------Pf~~~~~-------~~~~~~~l~~~~ 623 (1170)
+||-+|||||+|...-+ --..+||||||.++||++. ||.+.-+ +..+.-..+..+
T Consensus 381 VGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP 460 (513)
T KOG2052|consen 381 VGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRP 460 (513)
T ss_pred cceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCC
Confidence 99999999999875211 1246899999999999961 7764322 111122222344
Q ss_pred CCCCccccCC--HHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 624 ELPPSWVAKF--SEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 624 ~~p~~~~~~~--~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.+|..|...+ ..+.++|+.||..||.-|.|+-.|-+
T Consensus 461 ~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 461 NIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred CCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 4555555432 25678999999999999999877654
No 401
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.98 E-value=4.2e-32 Score=309.15 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=198.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.+.+.++||+|-||+|.+|.-. .+..||||+++.... ......|.+|+++|.+|+|||||+++++|..
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~---------- 606 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQ---------- 606 (807)
T ss_pred heehhhhhcCcccceeEEEEec-CceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeec----------
Confidence 4567889999999999999876 368999999975433 3345789999999999999999999999953
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++|||+. |+|.+++.... ........+++.||++||+||.+.
T Consensus 607 ------------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~ 656 (807)
T KOG1094|consen 607 ------------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL 656 (807)
T ss_pred ------------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence 355789999996 89999998763 345566778999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
++|||||.+.|||++.++++||+|||+++.+......+ .....+-..+|||||.+.- ++++.++|+
T Consensus 657 nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~-------------vqgr~vlpiRwmawEsill-gkFttaSDv 722 (807)
T KOG1094|consen 657 NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR-------------VQGRAVLPIRWMAWESILL-GKFTTASDV 722 (807)
T ss_pred chhhccccccceeecCcccEEecCcccccccccCCcee-------------eecceeeeeeehhHHHHHh-ccccchhhh
Confidence 99999999999999999999999999999654332111 1122356689999998775 579999999
Q ss_pred HHHHHHHHHhhc-----CCCchhHHHHHHHHhh---hcC--CCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH-----PFSTAMERQIVLSDLK---QKG--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt-----Pf~~~~~~~~~~~~l~---~~~--~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|+||+++||+++ ||....+++.....-. ..+ ..++.+.-++..+.++|.+||..|-.+||+++++-.+
T Consensus 723 WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 723 WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 999999999984 9988777666543211 111 1223334456688999999999999999999998654
No 402
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.1e-31 Score=295.15 Aligned_cols=228 Identities=21% Similarity=0.300 Sum_probs=178.8
Q ss_pred CCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCccccc
Q 001059 366 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445 (1170)
Q Consensus 366 G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~ 445 (1170)
|.||.||+|+++.+|+.||+|.++... .+.+|...+....||||+++++++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~--------------------- 55 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIV--------------------- 55 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhhee---------------------
Confidence 899999999999999999999986432 2334555556668999999997763
Q ss_pred ccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCce
Q 001059 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524 (1170)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NI 524 (1170)
.....|++|||++ ++|.+++.+...+++..+..++.|++.||+|||++||+||||||+||
T Consensus 56 -------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 116 (237)
T cd05576 56 -------------------SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNI 116 (237)
T ss_pred -------------------cCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 2357899999997 59999988877899999999999999999999999999999999999
Q ss_pred eecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc
Q 001059 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH 604 (1170)
Q Consensus 525 Li~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt 604 (1170)
+++.++.++|+|||.+...... .....++..|+|||++.+ ..++.++|+||+||++|||++
T Consensus 117 l~~~~~~~~l~df~~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 117 LLDDRGHIQLTYFSRWSEVEDS------------------CDGEAVENMYCAPEVGGI-SEETEACDWWSLGAILFELLT 177 (237)
T ss_pred EEcCCCCEEEecccchhccccc------------------cccCCcCccccCCcccCC-CCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999988654211 122356778999999876 567899999999999999997
Q ss_pred CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCC
Q 001059 605 PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALP 663 (1170)
Q Consensus 605 Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~ 663 (1170)
.............. .....+| ...++.++++|.+||+.||++||++ +++++||||
T Consensus 178 g~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 178 GKTLVECHPSGINT-HTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcchhhcCchhccc-ccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 33211100000000 0011122 2356789999999999999999986 999999996
No 403
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=302.14 Aligned_cols=255 Identities=25% Similarity=0.346 Sum_probs=196.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC--CC----ceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QH----VVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H--pn----IV~l~~~~~ 424 (1170)
....++|.++..+|+|.||.|..|.+..++..||||+++.. ....+...-|+.+|.++.+ |+ +|++.++|
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF- 160 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF- 160 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-
Confidence 34478899999999999999999999999999999999742 2344556779999999943 22 44444333
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI 502 (1170)
....+.+||+|.++-|+.+.+..+ .+++..+++.+++|+
T Consensus 161 ---------------------------------------dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL 201 (415)
T KOG0671|consen 161 ---------------------------------------DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQL 201 (415)
T ss_pred ---------------------------------------hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHH
Confidence 235678999999999999999764 469999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecC--------------------CCCEEEeecCcchhccccccccCCCCCCCCCCcc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDA--------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 562 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~--------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 562 (1170)
+++++|||+++++|-||||+|||+.+ +..|||+|||.|++...
T Consensus 202 ~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----------------- 264 (415)
T KOG0671|consen 202 LESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE----------------- 264 (415)
T ss_pred HHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc-----------------
Confidence 99999999999999999999999832 23589999999987432
Q ss_pred ccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCC---CchhHHHHHHHHhhhcCCCCCcccc--------
Q 001059 563 VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPF---STAMERQIVLSDLKQKGELPPSWVA-------- 631 (1170)
Q Consensus 563 ~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf---~~~~~~~~~~~~l~~~~~~p~~~~~-------- 631 (1170)
.+++.+.|..|.|||++.+. .++..|||||+||||+|+++++ ....+.+.+....+..+++|.....
T Consensus 265 -~hs~iVsTRHYRAPEViLgL-GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf 342 (415)
T KOG0671|consen 265 -HHSTIVSTRHYRAPEVILGL-GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYF 342 (415)
T ss_pred -CcceeeeccccCCchheecc-CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhh
Confidence 13566899999999999994 5899999999999999999744 3333333222111112232221100
Q ss_pred --------------------------------CC---HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 --------------------------------KF---SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 --------------------------------~~---~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.. -++.+||++||..||.+|+|+.|+|+||||....
T Consensus 343 ~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 343 RRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred hcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 00 1356999999999999999999999999998753
No 404
>PRK09194 prolyl-tRNA synthetase; Provisional
Probab=99.97 E-value=2.8e-30 Score=316.85 Aligned_cols=436 Identities=13% Similarity=0.108 Sum_probs=268.5
Q ss_pred cccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceee
Q 001059 705 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLE 778 (1170)
Q Consensus 705 ~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~la 778 (1170)
.++.+ .+.++|+++|+|.+++++++|++.+++.++++||++|.||.| ++.. +.+...++||+|.|++|+.++
T Consensus 28 ~ag~i--~~~~~G~~~~lP~g~~~~~~i~~~i~~~~~~~G~~ei~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~l~ 105 (565)
T PRK09194 28 RAGYI--RKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEEYGPELLRLKDRHGRDFV 105 (565)
T ss_pred hCCCc--cccCCCeeEECccHHHHHHHHHHHHHHHHHHcCCEEEECcccCcHHHHhhcCCccccchhceEEecCCCCEEE
Confidence 34444 356899999999999999999999999999999999999999 3322 356678899999999999999
Q ss_pred ecCCCCHHHHHHHHh----CCCCceeEEEecCeEEcC-CCCCC---CCceeEeEEEEeCCCCcccHH---HHHHHHHHHH
Q 001059 779 LSHELRLPFIRWAIS----NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIV 847 (1170)
Q Consensus 779 LRPD~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l 847 (1170)
|||+.+.+++.++.. ++..|+|+||+|++||+| +|+.| .|||+|.|+++||.++..+|+ +++.++.+++
T Consensus 106 LrPt~e~~~~~~~~~~~~s~~~LP~r~yqi~~~fR~E~rp~~Gl~R~reF~q~d~~~f~~~~~~a~~~~~~~~~~~~~i~ 185 (565)
T PRK09194 106 LGPTHEEVITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLDETYDAMYQAYSRIF 185 (565)
T ss_pred ECCCChHHHHHHHHhhhhhcccCCeEEEEeeCCccCCCCCCCcccccccEEEeeEEEEcCChHHHHHHHHHHHHHHHHHH
Confidence 999766655544443 446799999999999999 88864 567999999999998888898 6677789999
Q ss_pred HHcCCCcceEEEeCcHHHHHHHHH------------------HhCCCHHHHHHHHHHH------HHhcCCCCCcccccch
Q 001059 848 TRFFHAESCDIHLNHGDLLEAIWS------------------WAGIKAEHREKVAELL------AMMGSLRPQSSEWKSK 903 (1170)
Q Consensus 848 ~~lgi~~~~~i~lg~~~il~~~l~------------------~lgl~~~~~~~l~~~l------~~~d~~~~~~~~~~~~ 903 (1170)
+.||++ |.+.+++++.+.+... .|+...+...+....- ..+..+.. .....
T Consensus 186 ~~lgl~--~~~~~~~~g~~gg~~s~e~~~~~~~g~~~~~~c~~c~~~~n~e~a~~~~~~~~~~~~~~~~v~~---p~~~t 260 (565)
T PRK09194 186 DRLGLD--FRAVEADSGAIGGSASHEFMVLADSGEDTIVYSDESDYAANIEKAEALPPPRAAAEEALEKVDT---PNAKT 260 (565)
T ss_pred HHhCCc--cEEEEcccccCCCceeEEEEEecCCCceEEEEeCCCCcchhhhhhcccCCCCccccccceeecC---CCCCc
Confidence 999994 9998887555433221 1111100000000000 00000000 00000
Q ss_pred HHHHHHHH-------HHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC---hhHHHHHHHH------HHHHccC
Q 001059 904 WVVIRRQL-------LQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD---KPTRKALDEL------YLRIWRI 967 (1170)
Q Consensus 904 ~~~~~~~~-------~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~---~~~~~~l~~L------~l~~~g~ 967 (1170)
..++...+ ++..=+.... .. ++..+.|+..--+.++++.+... ....+.+.++ .+.-+|.
T Consensus 261 ~~e~a~~lg~~~~~~~KtLi~~~~~-~~---~lvvvp~d~~vn~~kl~~~lg~~~l~~a~~eel~~~~g~~~G~v~P~Gl 336 (565)
T PRK09194 261 IEELAEFLNVPAEKTVKTLLVKADG-EL---VAVLVRGDHELNEVKLENLLGAAPLELATEEEIRAALGAVPGFLGPVGL 336 (565)
T ss_pred HHHHHHHhCCCHHHeeEEEEEEeCC-eE---EEEEeecchhhhHHHHHhhcCCcccccCCHHHHHHhhCCCCCccCcccC
Confidence 00000000 0000000000 00 00011122222222222221100 0001111111 1122222
Q ss_pred c--ceEEEccCCCCCCCcccce-----EE-EE----------E----e--ccCCCccc---ccccce------ecccccc
Q 001059 968 E--KNIYIDALMPPIESYHRNL-----FF-QV----------F----S--VKEKYPAT---LVEGTL------LAVGGRY 1014 (1170)
Q Consensus 968 ~--~~i~~Dl~lvrgldYYtG~-----VF-e~----------~----~--~~~~~~~~---~~~~~~------I~~GGRY 1014 (1170)
. -.+.+|.++...-++|+|- -| .+ + . .+...|.- +....+ .-=|=+|
T Consensus 337 ~~~v~viiD~sl~~~~~~~~gan~~g~h~~~~~~~~d~~~~~~~d~~~~~~g~~c~~c~~~l~~~~~iEvGh~f~lG~~y 416 (565)
T PRK09194 337 PKDVPIIADRSVADMSNFVVGANEDDYHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGGTLKIARGIEVGHIFQLGTKY 416 (565)
T ss_pred CCCceEEEeccccccccccccCCCCCceeeCCccCcCCCcccccchhhhhcCCCCCCCCceeEEeeeEEEEEEecCCcch
Confidence 1 2577788777666666541 11 00 0 0 00000100 000011 1134455
Q ss_pred chhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCccHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLLVERMELVA 1086 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~~~a~~ia~ 1086 (1170)
-. .|+-. +...-|+..++.-..|+||++||+.++.+ +...+...+|.+|+|++.+ ++.....|.++++
T Consensus 417 s~---~~~~~-~~~~~g~~~~~~m~~~gIGv~Rli~al~e~~~d~~gl~~P~~iaP~~v~Iv~~~~~~~~~~~~a~~i~~ 492 (565)
T PRK09194 417 SE---AMNAT-VLDENGKAQPLIMGCYGIGVSRLVAAAIEQNHDEKGIIWPKAIAPFDVHIVPVNMKDEEVKELAEKLYA 492 (565)
T ss_pred hh---ccCCE-EECCCCCEEeEEEeeEechHHHHHHHHHHhhccccCccCCCccCCceEEEEECCCCcHHHHHHHHHHHH
Confidence 42 23321 11223333323334678999999888752 3344455789999999984 2346788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 001059 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156 (1170)
Q Consensus 1087 ~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~ 1156 (1170)
.||+.|++|.+++. +.++++++++|+..|||++|+||++|+++|+|+|+++.+|+|..|+++++++.+.
T Consensus 493 ~L~~~gi~v~~Ddr-~~~~g~k~~~ad~~GiP~~iiiG~~e~~~~~v~v~~r~~ge~~~v~~~~l~~~i~ 561 (565)
T PRK09194 493 ELQAAGIEVLLDDR-KERPGVKFADADLIGIPHRIVVGDRGLAEGIVEYKDRRTGEKEEVPVDELVEFLK 561 (565)
T ss_pred HHhccCCeEEEECC-CCCHHHHHHHHHhcCCCEEEEEcCccccCCeEEEEECCCCceEEEeHHHHHHHHH
Confidence 99999999998876 6799999999999999999999999999999999999999999999999988875
No 405
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.7e-31 Score=327.90 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=175.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~t----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||.||+|++..+ +..||||++..... .+...+| .++...+.++..++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~-- 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEP-- 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcc--
Confidence 468999999999999999999999988 89999998753221 1111111 22233344444433222110
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 489 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 489 (1170)
........++++|||++ ++|.+++.....
T Consensus 202 --------------------------------~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~ 249 (566)
T PLN03225 202 --------------------------------VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249 (566)
T ss_pred --------------------------------cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcccc
Confidence 00123467899999997 589888764321
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCc
Q 001059 490 --FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 566 (1170)
Q Consensus 490 --l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1170)
.....+..++.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+.... .....
T Consensus 250 ~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------~~~~~ 315 (566)
T PLN03225 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------NYIPK 315 (566)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--------------ccCCc
Confidence 123456789999999999999999999999999999986 5799999999998643211 11124
Q ss_pred ccccCccCCCcccccCCC---------------------CCCccchhHHHHHHHHHhhcCCCchhHH-HHHHHHhhhcCC
Q 001059 567 GQVGTYFYTAPEIEQGWP---------------------KIDEKADMYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGE 624 (1170)
Q Consensus 567 ~~~GT~~Y~APE~l~~~~---------------------~~~~ksDIwSlGviL~ELltPf~~~~~~-~~~~~~l~~~~~ 624 (1170)
..+||+.|||||++.... .++.++|||||||+||||++|....... ......+.....
T Consensus 316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence 468999999999764311 2445679999999999999854332222 111111111110
Q ss_pred ------------CCCc-------cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 625 ------------LPPS-------WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 625 ------------~p~~-------~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..+. .........+||++||+.||.+|||+.++|+||||....
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 396 DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 0000 000112345899999999999999999999999998764
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=3.6e-32 Score=314.50 Aligned_cols=272 Identities=25% Similarity=0.429 Sum_probs=221.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|+++..+|.|.||.|||++++.+++..|+|+++..... +..-+.+|+-+++.++|||||.|++.+.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsyl--------- 82 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYL--------- 82 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhh---------
Confidence 37999999999999999999999999999999999876443 3455778999999999999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+||.||||+ |+|.+..+-.+++++-++..+++..++|++|||++
T Consensus 83 -------------------------------r~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~ 131 (829)
T KOG0576|consen 83 -------------------------------RRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ 131 (829)
T ss_pred -------------------------------hhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC
Confidence 3467899999997 59999998889999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc--cCCCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE--QGWPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l--~~~~~~~~ks 590 (1170)
|=+|||||-.|||+++.|.+|++|||.+..+.. .-....++.|||.|||||+- .....|+..|
T Consensus 132 gk~hRdiKGanilltd~gDvklaDfgvsaqita---------------ti~KrksfiGtpywmapEvaaverkggynqlc 196 (829)
T KOG0576|consen 132 GKIHRDIKGANILLTDEGDVKLADFGVSAQITA---------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLC 196 (829)
T ss_pred CcccccccccceeecccCceeecccCchhhhhh---------------hhhhhhcccCCccccchhHHHHHhcccccccc
Confidence 999999999999999999999999999986531 12235778999999999973 3335699999
Q ss_pred hhHHHHHHHHHhh--c-CCCchhHHHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 591 DMYSLGIVFFELW--H-PFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELl--t-Pf~~~~~~~~~~~~l~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|||++|+...|+- + |....+++....-.-+.....|. .....++.+-+|++.+|.++|++||+++.+|+|+|..+
T Consensus 197 diwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 197 DIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred cccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 9999999999985 3 66666776665544443333322 22344567889999999999999999999999998776
Q ss_pred ch-HHHHHHHHHhcCCCC
Q 001059 666 ME-YELLDNILRMMHSSE 682 (1170)
Q Consensus 666 ~~-~~~~~~~~~~~~~~~ 682 (1170)
.. ....-.+++...+++
T Consensus 277 ~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 277 TLSRRLAIELLDKVNNPN 294 (829)
T ss_pred chhhHHHHHHHHHccCCC
Confidence 63 233334455555554
No 407
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=9.1e-32 Score=296.79 Aligned_cols=263 Identities=29% Similarity=0.447 Sum_probs=206.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|-++..||+|||++||+|.+....+.||||+-..+..- ........||..+.+.|.||-||++|++|-
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs----- 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS----- 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee-----
Confidence 4577788999999999999999988999999986554321 112345779999999999999999999872
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.+...+|-|+|||+| +|.-+|.....+++.+++.|+.||+.||.|
T Consensus 538 ----------------------------------lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 538 ----------------------------------LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKY 583 (775)
T ss_pred ----------------------------------eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 234567899999987 899999998999999999999999999999
Q ss_pred HHhC--CccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-
Q 001059 509 IHGQ--GIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 582 (1170)
Q Consensus 509 LHs~--gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 582 (1170)
|... .|||.||||.|||+-+ -|.+||+|||+++........... +.. -.+-..||.||++||.+--
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vd-------Gme-LTSQgAGTYWYLPPEcFvVg 655 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVD-------GME-LTSQGAGTYWYLPPECFVVG 655 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccc-------cee-eecccCceeeecCcceeecC
Confidence 9976 5999999999999954 478999999999987654322110 000 1233579999999997642
Q ss_pred --CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHH---hhh-cCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 583 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSD---LKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 583 --~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~---l~~-~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
.+..+.|+||||+|||+|.++. ||......+..+.. +.. ...+|+. +.+++++++||++||+..-++|..
T Consensus 656 kePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 656 KEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred CCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhh
Confidence 3568899999999999999996 88866544433221 111 2334443 456789999999999999999999
Q ss_pred HHHHHhccCCCC
Q 001059 654 ATELLQDALPPQ 665 (1170)
Q Consensus 654 a~eiL~~~~~~~ 665 (1170)
..++-.||++..
T Consensus 735 V~qLA~dpyllP 746 (775)
T KOG1151|consen 735 VQQLACDPYLLP 746 (775)
T ss_pred HHHHccCccccc
Confidence 999999986643
No 408
>PLN02908 threonyl-tRNA synthetase
Probab=99.97 E-value=5.7e-30 Score=319.60 Aligned_cols=354 Identities=14% Similarity=0.116 Sum_probs=258.1
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+.+.|+.+|+|.++.+++.|.+.+++.+.++||++|.||.+ ++ .++.+...++||.| |.+++.++|||+.|++
T Consensus 308 ~~~~G~~~~lP~g~~i~~~l~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~-~~~~~~~~Lrp~~~~~ 386 (686)
T PLN02908 308 ELSPGSCFFLPHGARIYNKLMDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVF-EIEKQEFGLKPMNCPG 386 (686)
T ss_pred CCCCcceEEechHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEE-ecCCeeEEEcCCCcHH
Confidence 44579999999999999999999999999999999999999 22 33455688999998 6678999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCC-CcccHH-HHHHHHHHHHHHcCCCcc
Q 001059 787 FIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGA-SALTEA-EVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 787 iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~-~~~aDa-Evi~la~~~l~~lgi~~~ 855 (1170)
++++++.+. ..|+|+|++|++||+|.+. .|.|||+|+++++||.+ ...+|+ |++.++.++++.||+.
T Consensus 387 ~~~~~~~~~~s~r~LPlr~~~~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~-- 464 (686)
T PLN02908 387 HCLMFAHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFT-- 464 (686)
T ss_pred HHHHHhccccChhhCCHhHEEeeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCc--
Confidence 999888632 4699999999999998763 25667999999999995 457888 9999999999999994
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.|+++. +.++..++..+.....+..++++.++. +. + .... .+ +.|+
T Consensus 465 ~~~~ls~r~--~~~~g~~~~w~~ae~~l~~~ld~~~~~------~~---------~---~~g~-------~a----fygp 513 (686)
T PLN02908 465 YELKLSTRP--EKYLGDLETWDKAEAALTEALNAFGKP------WQ---------L---NEGD-------GA----FYGP 513 (686)
T ss_pred EEEEEeCCc--cccCCCHHHHHHHHHHHHHHHHHcCCC------cE---------E---CCCc-------ee----eccc
Confidence 999999985 555544333333334455666654421 00 0 0000 00 1122
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCC--CCCcccceEEEEEeccCCCcccccccceeccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1013 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGR 1013 (1170)
.. +..+..++.++ .. ...+.+|+.+.. +++||| |....
T Consensus 514 ki------------d~~~~d~l~r~----~~-~~t~q~df~lp~~f~L~Y~~----e~~~~------------------- 553 (686)
T PLN02908 514 KI------------DITVSDALKRK----FQ-CATVQLDFQLPIRFKLSYSA----EDEAK------------------- 553 (686)
T ss_pred ce------------EEEEEeccCCE----ee-ccceeecccCHhhcCCEEEC----CCCCc-------------------
Confidence 10 00111122221 00 123455555433 577877 11000
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEec--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfai--glerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
..++ ..+.-|+ ++||++.+|.++ ...+.-.+|.+|+|++.+ +....+|+++++.||
T Consensus 554 ------------------~~~p-v~ihrai~GsiERli~iL~e~~~g~~p~wlsp~qv~Vipv~-~~~~~~A~~va~~LR 613 (686)
T PLN02908 554 ------------------IERP-VMIHRAILGSVERMFAILLEHYAGKWPFWLSPRQAIVVPIS-EKSQDYAEEVRAQLH 613 (686)
T ss_pred ------------------CCCC-EEEEeCceEhHHHHHHHHHHHcCCCCCCCCCCceEEEEEEC-HHHHHHHHHHHHHHH
Confidence 0000 1111112 799999988532 222222357799999996 677889999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.|++|+++.. ++++++++++|++.|+++++++|++|.++|+|+||++++++|..++++++++.+.+..++
T Consensus 614 ~~Gi~vevd~~-~~~l~kkir~A~~~g~~~viivG~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~ 684 (686)
T PLN02908 614 AAGFYVDVDVT-DRKIQKKVREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAE 684 (686)
T ss_pred HCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhh
Confidence 99999998775 779999999999999999999999999999999999999999999999999998877653
No 409
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.3e-31 Score=294.07 Aligned_cols=249 Identities=25% Similarity=0.404 Sum_probs=188.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+....+.+.||+|.||.||+|... ++.||||+++.. ..+.+..|-.+.+- +.|+||++++++= +.+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~e-kr~---- 276 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAE-KRG---- 276 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchh-ccC----
Confidence 456777899999999999999886 799999999743 34556666666554 5899999998652 100
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......+++|++|.+ |+|.++|..+ .+++....+++..+++||+|||
T Consensus 277 -------------------------------t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 277 -------------------------------TADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred -------------------------------CccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhc
Confidence 012456899999997 7999999764 5899999999999999999999
Q ss_pred hC---------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 511 GQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 511 s~---------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
+. .|+|||||++|||+.+|+++.|+|||+|..+....- ..+..+.+||.+|||||+|.
T Consensus 325 ee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~-------------~~d~~~qVGT~RYMAPEvLE 391 (534)
T KOG3653|consen 325 EELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKP-------------QGDTHGQVGTRRYMAPEVLE 391 (534)
T ss_pred ccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCC-------------CcchhhhhhhhhhcCHHHHh
Confidence 63 599999999999999999999999999998753210 11224479999999999998
Q ss_pred CCCCCC-----ccchhHHHHHHHHHhhc---------------CCCc-------hhHHHHHHHHhhhcCCCCCccccCC-
Q 001059 582 GWPKID-----EKADMYSLGIVFFELWH---------------PFST-------AMERQIVLSDLKQKGELPPSWVAKF- 633 (1170)
Q Consensus 582 ~~~~~~-----~ksDIwSlGviL~ELlt---------------Pf~~-------~~~~~~~~~~l~~~~~~p~~~~~~~- 633 (1170)
|.-+.. .+.||||+|.+||||++ ||.. ..+++...-..+..+.+|..|....
T Consensus 392 gainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~ 471 (534)
T KOG3653|consen 392 GAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAG 471 (534)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCcc
Confidence 843333 36899999999999973 3321 1122233333334556677776542
Q ss_pred -HHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 634 -SEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 634 -~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.-+++.+..||+.||+.|.|+.=+-+
T Consensus 472 ~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 472 MAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred HHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 35689999999999999999875543
No 410
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=2.2e-31 Score=273.67 Aligned_cols=253 Identities=21% Similarity=0.372 Sum_probs=200.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++++++|+|-|++||.|.+..+++.++||+++.. ....+.||+.+|..|. ||||+++++...++
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp----- 105 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDP----- 105 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCc-----
Confidence 468999999999999999999999999999999999742 3457999999999997 99999999775432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.+....+++||+.. +...+. ..++...++.++.+++.||.|||
T Consensus 106 ---------------------------------~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 106 ---------------------------------ESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred ---------------------------------cccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHH
Confidence 23455789999975 555554 34788889999999999999999
Q ss_pred hCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+||+|||+||.|+|||.. -.++|+|+|+|.++.+.. .-+..+.+..|--||.+-..+.|+.+
T Consensus 150 S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~----------------eYnVRVASRyfKGPELLVdy~~YDYS 213 (338)
T KOG0668|consen 150 SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK----------------EYNVRVASRYFKGPELLVDYQMYDYS 213 (338)
T ss_pred hcCcccccCCcceeeechhhceeeeeecchHhhcCCCc----------------eeeeeeehhhcCCchheeechhcccc
Confidence 9999999999999999975 579999999999875432 12345778889999999988889999
Q ss_pred chhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhh-------------cCCCCCcc---------------------cc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQ-------------KGELPPSW---------------------VA 631 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~-------------~~~~p~~~---------------------~~ 631 (1170)
-|||||||+|..|+- ||.... +.....++.+- ...+++.+ .-
T Consensus 214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl 293 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL 293 (338)
T ss_pred HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence 999999999999984 876432 22222211110 00111111 11
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+|++.+|+.++|..|..+|+|+.|++.||||....
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 348999999999999999999999999999987654
No 411
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=311.36 Aligned_cols=246 Identities=30% Similarity=0.441 Sum_probs=185.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
-+..-+.||+|+||.||+++++.+|+.||||.++... .....+...+|+++|++++|||||++++.= ++.
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~ie-e~~-------- 83 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIE-ETK-------- 83 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccC-Ccc--------
Confidence 3455578999999999999999999999999987533 445567888999999999999999998642 110
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.. | .-...-.++||||. |||...+++. .++++.+.+.++.+++.||.|||.
T Consensus 84 -~~-~-----------------------~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE 138 (732)
T KOG4250|consen 84 -FL-G-----------------------LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE 138 (732)
T ss_pred -cc-C-----------------------cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 01234579999996 6999999753 469999999999999999999999
Q ss_pred CCccccCCCCCceeec--CCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 512 QGIIHRDLTPNNIFFD--ARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~--~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
+|||||||||.||++- .+| .-||+|||.|+-+..+. ..++.+||+.|.+||.+.....|+
T Consensus 139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------~~~S~vGT~~YLhPel~E~q~~y~ 202 (732)
T KOG4250|consen 139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------LFTSLVGTEEYLHPELYERQKKYT 202 (732)
T ss_pred cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----------------eeeeecCchhhcChHHHhhccCcC
Confidence 9999999999999984 334 47999999999765332 236789999999999998546799
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH----HHHHHHHhhhcC-------------C------CCCccccCCH----HHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKG-------------E------LPPSWVAKFS----EQE 637 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~----~~~~~~~l~~~~-------------~------~p~~~~~~~~----e~~ 637 (1170)
..+|.|||||++|+++| ||.+... .+....++..+. + +|. ....++ .+.
T Consensus 203 ~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~ 281 (732)
T KOG4250|consen 203 ATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLT 281 (732)
T ss_pred ceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCC-cccccHHHHhhhh
Confidence 99999999999999998 6654322 223332222211 1 111 112222 345
Q ss_pred HHHHHccCCCCCCCCC
Q 001059 638 SLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPt 653 (1170)
.++..+|..+|.+|..
T Consensus 282 kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 282 KWLASMLEWNPRKRGH 297 (732)
T ss_pred HHHHHHHhhhHHHhCC
Confidence 7888889999998884
No 412
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-31 Score=285.56 Aligned_cols=256 Identities=27% Similarity=0.383 Sum_probs=199.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|.-++.+|.|.- .|..|-+...+++||+|+............+..+|..++..++|+||++++.+|.-
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP--------- 86 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTP--------- 86 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCc---------
Confidence 45666788999988 78888898899999999987665555566789999999999999999999988721
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
+........+|+||||+..+|.+.+. -.++...+..+++|++.|++|||+.||
T Consensus 87 -------------------------~~~l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~I 139 (369)
T KOG0665|consen 87 -------------------------QKTLEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGI 139 (369)
T ss_pred -------------------------cccHHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcce
Confidence 22223456789999999999999887 347888999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||++..++.+||.|||+|+... ..+..+.++.|..|.|||++.+.+ |...+||||
T Consensus 140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e~----------------~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwS 202 (369)
T KOG0665|consen 140 IHRDLKPSNIVVNSDCTLKILDFGLARTED----------------TDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWS 202 (369)
T ss_pred eecccCcccceecchhheeeccchhhcccC----------------cccccCchhheeeccCchheeccC-Ccccchhhh
Confidence 999999999999999999999999998532 224567789999999999999954 999999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhh---------------------h----------cCCCCC-ccc-------cC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLK---------------------Q----------KGELPP-SWV-------AK 632 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~---------------------~----------~~~~p~-~~~-------~~ 632 (1170)
+||++.||++ -|.+........++.. . ...+|. .|. ..
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 9999999974 1211111111100000 0 000111 010 11
Q ss_pred CHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 633 FSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 633 ~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
...+++++.+||..||++|.+++++|+||+++
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 23568999999999999999999999999887
No 413
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-32 Score=283.98 Aligned_cols=261 Identities=28% Similarity=0.402 Sum_probs=204.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|.+--+.||-|+||.||.+.+..+|+.||+|++.....+.....++.+|+++|..++|.|++..++...-+ ..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp-h~------ 126 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA-NP------ 126 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC-Cc------
Confidence 33445789999999999999999999999999876666666678899999999999999999887654211 00
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
.+ -..+|+++|++..+|..++.+...++...++-+++||++||+|||+.||.
T Consensus 127 ---------df-------------------FqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~IL 178 (449)
T KOG0664|consen 127 ---------SF-------------------FQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANIL 178 (449)
T ss_pred ---------hH-------------------HHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchh
Confidence 00 12368999999999999999889999999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||.|.|+++++.+||||||+|+.....+ +..++..+-|.+|.|||++.|...|+.+.||||+
T Consensus 179 HRDIKPGNLLVNSNCvLKICDFGLARvee~d~--------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSV 244 (449)
T KOG0664|consen 179 HRDIKPGNLLVNSNCILKICDFGLARTWDQRD--------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSV 244 (449)
T ss_pred hccCCCccEEeccCceEEecccccccccchhh--------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehh
Confidence 99999999999999999999999999754332 2234556789999999999998889999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHH-----------------------HHHhhhcCCCCCccc---------cCCHHHHHHH
Q 001059 596 GIVFFELWH---PFSTAMERQIV-----------------------LSDLKQKGELPPSWV---------AKFSEQESLL 640 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~-----------------------~~~l~~~~~~p~~~~---------~~~~e~~~LI 640 (1170)
|||+.||+. -|....+-+.. ..+++ .+..+|... ....+...++
T Consensus 245 GCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR-~~~k~Ps~~vLYtlsS~~~~~heav~~~ 323 (449)
T KOG0664|consen 245 GCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLR-AGLRAPDTQRLYKIASPDDKNHEAVDLL 323 (449)
T ss_pred hHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhc-cCCCCCCccceeeecCCcccchHHHHHH
Confidence 999999973 22221111110 11122 222222221 1223567899
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
..++..||++|.+.++.++|+....-
T Consensus 324 ~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 324 QKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred HHHhCCCCcccccHhhhccccccccc
Confidence 99999999999999999999876554
No 414
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=4.7e-31 Score=312.93 Aligned_cols=247 Identities=34% Similarity=0.484 Sum_probs=190.2
Q ss_pred EeeeccCCcEE-EEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCC
Q 001059 360 LQPLGHGGFGH-VVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 360 ~~~LG~G~fG~-Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
-+.+|.|+.|+ ||+|... |+.||||.+-. +...-..||+..|+.- .|||||++|+. |
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~--E------------ 572 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCS--E------------ 572 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEee--c------------
Confidence 35689999886 7999886 89999997742 2234577999999888 69999999854 2
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHF---DKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l---~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.+..++||..|+|..+|.+++... ..+ ..-..+.++.|+++||+|||+.+
T Consensus 573 --------------------------~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 573 --------------------------QDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred --------------------------cCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 346789999999999999999874 111 11345788999999999999999
Q ss_pred ccccCCCCCceeecC---C--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 514 IIHRDLTPNNIFFDA---R--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 514 IiHrDLKp~NILi~~---~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||||||||.||||+. + ..++|+|||+++.+.... ..++ ...+..||-+|+|||++.. ..-+.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~-----------sS~~-r~s~~sGt~GW~APE~L~~-~~~~~ 693 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK-----------SSFS-RLSGGSGTSGWQAPEQLRE-DRKTQ 693 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCc-----------chhh-cccCCCCcccccCHHHHhc-cccCc
Confidence 999999999999976 3 368999999999874332 1111 1455679999999999998 44577
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++||||+||++|+.++ ||.....++.- ++......-.-.+....++.+||.+|++++|..||+|.++|.||||-
T Consensus 694 avDiFslGCvfyYvltgG~HpFGd~~~R~~N--Il~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 694 AVDIFSLGCVFYYVLTGGSHPFGDSLERQAN--ILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ccchhhcCceEEEEecCCccCCCchHHhhhh--hhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 9999999999999986 99887766543 23322221111001011899999999999999999999999999988
Q ss_pred CchH
Q 001059 665 QMEY 668 (1170)
Q Consensus 665 ~~~~ 668 (1170)
..+.
T Consensus 772 ~~ek 775 (903)
T KOG1027|consen 772 DSEK 775 (903)
T ss_pred ChHH
Confidence 7764
No 415
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.7e-29 Score=274.86 Aligned_cols=238 Identities=34% Similarity=0.566 Sum_probs=193.5
Q ss_pred CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccc
Q 001059 367 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 446 (1170)
Q Consensus 367 ~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~ 446 (1170)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..+++++|+||+++++++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------------------- 58 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--------------------- 58 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee---------------------
Confidence 589999999998899999999875443321 5789999999999999999999877632
Q ss_pred cccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcee
Q 001059 447 FSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525 (1170)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NIL 525 (1170)
....+++|||+++ +|..++.....++...++.++.+++.++.|||+.+++|+||+|+||+
T Consensus 59 -------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~ 119 (244)
T smart00220 59 -------------------EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENIL 119 (244)
T ss_pred -------------------CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeE
Confidence 2567999999986 99999887666999999999999999999999999999999999999
Q ss_pred ecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-
Q 001059 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 604 (1170)
Q Consensus 526 i~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt- 604 (1170)
++.++.++|+|||.+....... ......++..|+|||.+.+ ..++.++||||||+++|+|++
T Consensus 120 ~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 120 LDEDGHVKLADFGLARQLDPGG----------------LLTTFVGTPEYMAPEVLLG-KGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred ECCCCcEEEccccceeeecccc----------------ccccccCCcCCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999998753221 1234568889999999886 567889999999999999996
Q ss_pred --CCCchhHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 605 --PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 605 --Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||.............. ....+ ......+.++.+++.+||..+|++||++.++++|+|+
T Consensus 183 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 183 KPPFPGDDQLLELFKKIG-KPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCCCCCCCcHHHHHHHHh-ccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 7755333333333332 22222 1211156789999999999999999999999999986
No 416
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=4.4e-29 Score=299.79 Aligned_cols=267 Identities=18% Similarity=0.261 Sum_probs=182.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc----------------cCCcEEEEEEEecCCCChh------------hHHHHHH
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNK----------------LDGRHYAVKKIRLKDKSLP------------VNDRILR 403 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~----------------~tg~~vAVK~i~~~~~~~~------------~~~~~~~ 403 (1170)
...++|++.++||+|+||+||+|.+. ..++.||||.+........ ..+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34689999999999999999999752 2456899999865322100 1122344
Q ss_pred HHHHHHhccCCCc-----eeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-
Q 001059 404 EVATLSRLQHQHV-----VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 477 (1170)
Q Consensus 404 Ev~iL~~l~HpnI-----V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~- 477 (1170)
|+..+.+++|.++ ++++++|.... .+........|+||||++
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~--------------------------------~~g~~~~~~~~LV~Ey~~~ 269 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNT--------------------------------ADGAFTKGSQWLVWKFESD 269 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhccccc--------------------------------ccccccCCceEEEEEcCCC
Confidence 6777777766654 44555542210 001112345799999997
Q ss_pred CcHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEE
Q 001059 478 RTLRQVFESY------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533 (1170)
Q Consensus 478 gsL~~~l~~~------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vK 533 (1170)
++|.++++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 270 gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~k 349 (507)
T PLN03224 270 ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVK 349 (507)
T ss_pred CcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEE
Confidence 5898887632 1245677889999999999999999999999999999999999999
Q ss_pred EeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-------------------C--Cccchh
Q 001059 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-------------------I--DEKADM 592 (1170)
Q Consensus 534 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-------------------~--~~ksDI 592 (1170)
|+|||+++...... ........+|+.|+|||++..... | ..+.||
T Consensus 350 L~DFGla~~~~~~~--------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~Dv 415 (507)
T PLN03224 350 IIDFGAAVDMCTGI--------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDS 415 (507)
T ss_pred EEeCcCccccccCC--------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccch
Confidence 99999997542111 011122345899999998754211 1 234799
Q ss_pred HHHHHHHHHhhc----CCCchhH--HHH-----HHH---Hhh-hcCCCCCccccCCHHHHHHHHHccCCCC---CCCCCH
Q 001059 593 YSLGIVFFELWH----PFSTAME--RQI-----VLS---DLK-QKGELPPSWVAKFSEQESLLRRLMSPSP---SDRPSA 654 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~--~~~-----~~~---~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP---~~RPta 654 (1170)
||+||++|+|++ ||..... .+. ... ... ....+ +.+...++...+|+.+||..+| .+|+|+
T Consensus 416 wSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~-~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa 494 (507)
T PLN03224 416 YTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF-SLLDRNKEAGWDLACKLITKRDQANRGRLSV 494 (507)
T ss_pred hhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc-ccccccChHHHHHHHHHhccCCCCcccCCCH
Confidence 999999999986 4432111 000 000 011 11112 2345667889999999999876 689999
Q ss_pred HHHHhccCCCC
Q 001059 655 TELLQDALPPQ 665 (1170)
Q Consensus 655 ~eiL~~~~~~~ 665 (1170)
.++|+||||..
T Consensus 495 ~eaL~Hp~f~~ 505 (507)
T PLN03224 495 GQALSHRFFLP 505 (507)
T ss_pred HHHhCCCCcCC
Confidence 99999999864
No 417
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.3e-29 Score=307.49 Aligned_cols=248 Identities=24% Similarity=0.337 Sum_probs=199.3
Q ss_pred CceEEeeeccCCcEEEEEEEEcc---C----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL---D----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~---t----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
++.+.+.||.|.||.|++|.... . ...||||.++..... .....+..|+++|+.+ +||||+.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 44566699999999999998541 1 457999998755444 5677899999999999 69999999999832
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CC
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HF 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l 490 (1170)
...+++|+|||. |+|..+++... .+
T Consensus 374 --------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 374 --------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred --------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 356799999996 79999987655 38
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
+....+.++.||+.||+||++.++|||||-.+|||+..+..+||+|||+|+......... .+...|
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~--------------~~~~~~ 481 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYR--------------TKSSAG 481 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceE--------------ecCCCC
Confidence 888999999999999999999999999999999999999999999999998643222110 011122
Q ss_pred --CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 571 --TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 571 --T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
...|||||.+.. ..|+.++|||||||+|||+++ |+.+....+.+...+ ..+.....+..+++++.++|+.||
T Consensus 482 ~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l-~~G~r~~~P~~c~~eiY~iM~~CW 559 (609)
T KOG0200|consen 482 TLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL-KEGNRMEQPEHCSDEIYDLMKSCW 559 (609)
T ss_pred ccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHh
Confidence 345999999998 789999999999999999996 776643233334433 366666666677899999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.+|.+||++.++...
T Consensus 560 ~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 560 NADPEDRPTFSECVEF 575 (609)
T ss_pred CCCcccCCCHHHHHHH
Confidence 9999999999999863
No 418
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-28 Score=275.06 Aligned_cols=134 Identities=23% Similarity=0.384 Sum_probs=116.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----C---CCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----H---QHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----H---pnIV~l~~~~~e~ 426 (1170)
.+|.++++||.|.|++||+|.+..+.+.||+|+.+. .....+..+.|+++|++++ | .+||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 689999999999999999999999999999999873 2334567889999999983 3 3699999988554
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~ 504 (1170)
| ....+++||+|+++.+|..++.. +..++...++.|++||+.
T Consensus 155 G------------------------------------pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 155 G------------------------------------PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred C------------------------------------CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 3 24678999999999999999975 457999999999999999
Q ss_pred HHHHHHh-CCccccCCCCCceeec
Q 001059 505 GLAHIHG-QGIIHRDLTPNNIFFD 527 (1170)
Q Consensus 505 gL~yLHs-~gIiHrDLKp~NILi~ 527 (1170)
||.|||. .||||-||||+|||+.
T Consensus 199 GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 199 GLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HHHHHHHhcCccccCCCcceeeee
Confidence 9999997 5999999999999984
No 419
>TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent groups. This group includes enzymes from Escherichia coli, Bacillus subtilis, Aquifex aeolicus, the spirochete Treponema pallidum, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. The other group includes the Pro-specific domain of a human multifunctional tRNA ligase and the prolyl-tRNA synthetases from the Archaea, the Mycoplasmas, and the spirochete Borrelia burgdorferi.
Probab=99.96 E-value=3.2e-28 Score=296.06 Aligned_cols=443 Identities=13% Similarity=0.109 Sum_probs=269.1
Q ss_pred hcccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCcee
Q 001059 704 HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLL 777 (1170)
Q Consensus 704 ~~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~l 777 (1170)
..+|.++ +.+.|+.+|+|.+.++++.|++.+++.+.++||++|.||.| ++. +.++...++||+|.|++|+.+
T Consensus 27 ~rag~i~--~~~~G~~~~lP~g~rv~~~I~~~i~~~~~~~G~~ei~~P~l~~~el~~~sg~~~~~~~emf~~~dr~~~~l 104 (568)
T TIGR00409 27 LRAGFIR--RLGSGLYNWLPLGLRVLKKVENIVREEMNKDGAIEVLLPALQPAELWQESGRWDTYGPELLRLKDRKGREF 104 (568)
T ss_pred HhCCCcc--ccCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHHhhcCCCCccchhcEEEecCCCCEE
Confidence 3455554 67899999999999999999999999999999999999999 222 235667899999999999999
Q ss_pred eecCC----CCHHHHHHHHhCCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHH---HHHH
Q 001059 778 ELSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TMDI 846 (1170)
Q Consensus 778 aLRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~~~ 846 (1170)
+|||+ +|..++|.+.+++..|+|+||+|++||+| +|+. |.+||+|.+++.||.+...+|+|...+ ..++
T Consensus 105 ~LrPT~Ee~~t~~~~~~i~syr~LPlrlyqi~~~fR~E~rpr~Gl~R~REF~~~d~~~f~~~~~~a~~e~~~~~~~y~~i 184 (568)
T TIGR00409 105 VLGPTHEEVITDLARNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEESLDATYQKMYQAYSNI 184 (568)
T ss_pred EEcCCCcHHHHHHHHHHHhhccccCeEEEEeeCEeeCCCCCCCCccccccEEEEEEEEEeCChHHHHHHHHHHHHHHHHH
Confidence 99997 89888889888888899999999999998 8876 456799999999999989999888755 5999
Q ss_pred HHHcCCCcceEEEeCcHHHHHHHH------------------HHhCCCHHHHHHHHHHHHHhcCCCCCcccc--cchHHH
Q 001059 847 VTRFFHAESCDIHLNHGDLLEAIW------------------SWAGIKAEHREKVAELLAMMGSLRPQSSEW--KSKWVV 906 (1170)
Q Consensus 847 l~~lgi~~~~~i~lg~~~il~~~l------------------~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~--~~~~~~ 906 (1170)
+++||++ +.+..++++.+.+.. ..++...+...+.. .....+.-....... .... .
T Consensus 185 f~~LgL~--~~~v~~~~g~~gg~~s~ef~~~~~~ge~~i~~c~~~~y~an~e~a~~-~~~~~~~~~~~~~~~~~tp~~-~ 260 (568)
T TIGR00409 185 FSRLGLD--FRPVQADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIELAEA-LAPGERNAPTAELDKVDTPNT-K 260 (568)
T ss_pred HHHhCCc--ceEEEeccccCCCccceEEeEecCCCceEEEEecCcccchhhhhhcc-cCccccccccccceeecCCCC-C
Confidence 9999994 888777665443221 11111111000000 000000000000000 0000 0
Q ss_pred HHHHHHHHcCCcHHHHHH--HH-------HHH-HHhcCChhhHHHHHhccCCC----ChhHHHHHHHH------HHHHcc
Q 001059 907 IRRQLLQELNLAEAVVNR--LQ-------TVG-LRFCGAADQALPRLRGALPA----DKPTRKALDEL------YLRIWR 966 (1170)
Q Consensus 907 ~~~~~~~~~~l~~~~~~~--l~-------~l~-~~~~g~~~~~l~~l~~~~~~----~~~~~~~l~~L------~l~~~g 966 (1170)
...++....+++....-+ +. .+. ..+.|+.+--..+++..+.. .....+.+... ++.-.|
T Consensus 261 ti~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~v~~rgd~~vn~~k~~~~~g~~~~~~~a~~~~~~~~~g~~~g~~gpv~ 340 (568)
T TIGR00409 261 TIAELVECFNLPAEKVVKTLLVKAVDKSEPLVALLVRGDHELNEVKAPNLLLVAQVLELATEEEIFQKIASGPGSLGPVN 340 (568)
T ss_pred cHHHHHHHhCCCHhHeeeEEEEEecCCccceEEEEecCcchhhHHHHHHHhccCcccccCCHHHHHHhhCCCCCccCccc
Confidence 001111111111110000 00 000 01123222222222222100 00001111111 111111
Q ss_pred Cc--ceEEEccCCCCCCCc----------ccceEEE----------E--EeccCCCcc---ccc-----ccc-eeccccc
Q 001059 967 IE--KNIYIDALMPPIESY----------HRNLFFQ----------V--FSVKEKYPA---TLV-----EGT-LLAVGGR 1013 (1170)
Q Consensus 967 ~~--~~i~~Dl~lvrgldY----------YtG~VFe----------~--~~~~~~~~~---~~~-----~~~-~I~~GGR 1013 (1170)
+. .++..|.++...-++ |++..+. + ...+...|. ++. +.+ ..-=|=|
T Consensus 341 ~~~~~~i~~D~~~~~~~~~~~gan~~~~h~~~~~~~rd~~~~~~~d~~~~~eGd~cp~c~~~l~~~rgIEvGhiF~LG~k 420 (568)
T TIGR00409 341 INGGIPVLIDQTVALMSDFAAGANADDKHYFNVNWDRDVAIPEVADIRKVKEGDPSPDGQGTLKIARGIEVGHIFQLGTK 420 (568)
T ss_pred cccCceEEechhhhcccccccccCCCCceeecccccccCCccccchhhhhhccCCCCCCCCcccccceEEEEEeccchhh
Confidence 21 245556654433333 2222211 0 001111110 010 111 1112446
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhcc------CCCCCCCCCCCceEEEEEcCCC--ccHHHHHHHH
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG--GLLVERMELV 1085 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~------~~~~~~~~~~~~~vlv~~~~~~--~~~~~a~~ia 1085 (1170)
|-.- ||.. +....|+..++.-.-++||++||+.++. .+..++...+|.+|.|++.... .....|.++.
T Consensus 421 YS~~---~~~~-~~d~~g~~~~~~mgcyGIGvsRli~aiie~~~D~~Gl~wP~~iAP~qV~Iip~~~~~~~~~~~a~~l~ 496 (568)
T TIGR00409 421 YSEA---LKAT-FLDENGKNQFMTMGCYGIGVSRLVSAIAEQHHDERGIIWPKAIAPYDVVIVVMNMKDEEQQQLAEELY 496 (568)
T ss_pred hHHh---cCCE-EECCCCCEEEEEEeCCcchHHHHHHHHHHHhCccCCCcCChhhCCeEEEEEEcCCChHHHHHHHHHHH
Confidence 6543 3221 1222333343333345789999987763 3445555678999999987422 3566788899
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 001059 1086 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1086 ~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~ 1157 (1170)
+.|++.|++|.+++. +.+++++++.|+..|+|+.|+||.+++++|+|+|++++++++..|+++++++.+..
T Consensus 497 ~~L~~~gi~v~~DDr-~~~~G~K~~dadliGiP~~i~vG~~~l~~~~Vei~~R~~~~~~~v~~~~l~~~i~~ 567 (568)
T TIGR00409 497 SELLAQGVDVLLDDR-NERAGVKFADSELIGIPLRVVVGKKNLDNGEIEVKKRRNGEKQLIKKDELVECLEE 567 (568)
T ss_pred HHHHhCCCEEEEECC-CCCHHHHHHhhhhcCCCEEEEECCCcccCCeEEEEEcCCCceEEEEHHHHHHHHhh
Confidence 999999999998776 56899999999999999999999999999999999999999999999999887753
No 420
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=1.3e-28 Score=323.99 Aligned_cols=236 Identities=21% Similarity=0.328 Sum_probs=178.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|.....||+|+||.||+|+++.+|..||||.++.... ...+|+..+++++|||||+++++|.+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~--------- 754 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRS--------- 754 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEc---------
Confidence 456667889999999999999998999999998863322 12346889999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--- 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH--- 510 (1170)
....|+|||||+ |+|.++++. +++..+..++.||++||+|||
T Consensus 755 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 755 -------------------------------EKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -------------------------------CCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCC
Confidence 234689999997 699999863 889999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.+|+||||||+||+++.++..++. ||.+.... ......||+.|||||++.+ ..++.++
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~-~~~~~~s 859 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC-------------------TDTKCFISSAYVAPETRET-KDITEKS 859 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccc-------------------cCCCccccccccCcccccC-CCCCccc
Confidence 6799999999999999999888876 66544321 0123368999999999987 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHH----HHHHHHhhh--------cCCCCC---ccccCCHHHHHHHHHccCCCCCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQ--------KGELPP---SWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~----~~~~~~l~~--------~~~~p~---~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
|||||||++|||++ ||...... ......... ...... .......++.+++.+||+.||++||
T Consensus 860 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred chhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence 99999999999997 66422110 000000000 000100 0111123567899999999999999
Q ss_pred CHHHHHhc
Q 001059 653 SATELLQD 660 (1170)
Q Consensus 653 ta~eiL~~ 660 (1170)
|+.++++.
T Consensus 940 t~~evl~~ 947 (968)
T PLN00113 940 CANDVLKT 947 (968)
T ss_pred CHHHHHHH
Confidence 99999875
No 421
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=3.7e-29 Score=281.78 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=196.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC------CCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH------QHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H------pnIV~l~~~~~e~~ 427 (1170)
-..|.+....|+|-|++|.+|.+..-|+.||||+|..+.. ....=++|+++|++|+. -|+++++..|.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~--- 504 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK--- 504 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh---
Confidence 4679999999999999999999999999999999985432 23456789999999953 47777775552
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC---CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD---HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~---~l~e~~~~~i~~qI~~ 504 (1170)
...++|+|+|-+.-+|.++|...+ .+....++.|+.|+..
T Consensus 505 -------------------------------------hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLfl 547 (752)
T KOG0670|consen 505 -------------------------------------HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFL 547 (752)
T ss_pred -------------------------------------hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHH
Confidence 357899999999999999998776 4888999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||..|-..||+|.||||+|||+++. ..+||||||.|.+....++ +.+.-+..|.|||++.|
T Consensus 548 ALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei-----------------tPYLVSRFYRaPEIiLG- 609 (752)
T KOG0670|consen 548 ALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI-----------------TPYLVSRFYRAPEIILG- 609 (752)
T ss_pred HHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc-----------------cHHHHHHhccCcceeec-
Confidence 9999999999999999999999875 6799999999987654432 33455678999999999
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCch--hHHHHHHHHhh--------------------------------------
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTA--MERQIVLSDLK-------------------------------------- 620 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~--~~~~~~~~~l~-------------------------------------- 620 (1170)
-.|+...|+||+||+||||+| -|.+. ..+-.+...+.
T Consensus 610 ~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~ 689 (752)
T KOG0670|consen 610 LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKR 689 (752)
T ss_pred CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeE
Confidence 569999999999999999987 23322 22211111111
Q ss_pred -----------------hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 621 -----------------QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 621 -----------------~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
....+|........++.+|+..||..||.+|.|..++|+|||+..
T Consensus 690 ~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 690 TVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred EEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 011111111122235679999999999999999999999999864
No 422
>PRK12325 prolyl-tRNA synthetase; Provisional
Probab=99.96 E-value=1.9e-27 Score=283.07 Aligned_cols=371 Identities=11% Similarity=0.098 Sum_probs=241.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecC---CC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSH---EL 783 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRP---D~ 783 (1170)
..+.|+.+|+|..+.+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||+|.|.+++.++||| ++
T Consensus 34 ~~~~G~~~~lP~g~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~~~L~Pt~e~~ 113 (439)
T PRK12325 34 QQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESGRYDAYGKEMLRIKDRHDREMLYGPTNEEM 113 (439)
T ss_pred ccCCceEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhheEEecCCCCEEEEcCCCcHH
Confidence 45899999999999999999999999999999999999999 222 3356788999999999999999999 77
Q ss_pred CHHHHHHHHh-CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCc---ccHHHHHHHHHHHHHHcCCCcc
Q 001059 784 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASA---LTEAEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 784 T~~iaR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~---~aDaEvi~la~~~l~~lgi~~~ 855 (1170)
+++++|.... ++..|+|+||+|+|||+| +|+. |.|||+|-++.+|+.+.. .+..+++.++.++++.||+..
T Consensus 114 ~~~~~~~~~~syrdLPlrl~q~~~~fR~E~~~~~GL~R~reF~~~D~h~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~~- 192 (439)
T PRK12325 114 ITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARHSYNRMFVAYLRTFARLGLKA- 192 (439)
T ss_pred HHHHHHHHhhhchhhchHheEecCEecCCCCCCCCccccceEeEeccEEEeCCHHHHHHHHHHHHHHHHHHHHHcCCce-
Confidence 8888885554 567899999999999998 6764 556799999999987632 456799999999999999974
Q ss_pred eEEEeCcHHHHHHHH-------HHhCCCHHHHHHHH-HHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHH
Q 001059 856 CDIHLNHGDLLEAIW-------SWAGIKAEHREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 927 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l-------~~lgl~~~~~~~l~-~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 927 (1170)
+.+.++... +.+.. ...|-++. ..+ .+.+... .. . ...|+ . ..+..
T Consensus 193 ~~v~~~~~~-~gg~~s~ef~~~~~~Ge~~~---~~c~~~~~~~~-~~-~----~~~~~---------------~-~~l~~ 246 (439)
T PRK12325 193 IPMRADTGP-IGGDLSHEFIILAETGESTV---FYDKDFLDLLV-PG-E----DIDFD---------------V-ADLQP 246 (439)
T ss_pred EEEEEccCC-CCCCcceeeEeecCCCCceE---EEcCCchhhcc-CC-C----cccCC---------------H-HHHHH
Confidence 566554321 10000 00010000 000 0000000 00 0 00000 0 11111
Q ss_pred HHHHhcCChhhHHHHHhccCCCChhHHHHHHHH-HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccc
Q 001059 928 VGLRFCGAADQALPRLRGALPADKPTRKALDEL-YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006 (1170)
Q Consensus 928 l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L-~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~ 1006 (1170)
++..... ....+ .++ .-.+.....+ .|+...++.. .|.+|..
T Consensus 247 ~l~~~~~-----------~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~ie--vg~~~~l--------------- 289 (439)
T PRK12325 247 IVDEWTS-----------LYAAT-------EEMHDEAAFAAVPE--ERRLSARGIE--VGHIFYF--------------- 289 (439)
T ss_pred HHhhhcc-----------cccch-------hhhhccCCCCcCCC--cceeecceEE--EEeeecC---------------
Confidence 1100000 00000 000 0000000000 0111122111 2223221
Q ss_pred eeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCccH
Q 001059 1007 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLL 1078 (1170)
Q Consensus 1007 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~ 1078 (1170)
|=+| .+.||-. +...-|....+--.-|++|++|++.+|.+ +...+...+|.+|+|++.. ++...
T Consensus 290 ----g~~y---s~~f~~~-y~d~~g~~~~i~~~~~GiGieRli~~l~e~~~d~~g~~~P~~iaP~qV~Iipi~~~~~~~~ 361 (439)
T PRK12325 290 ----GTKY---SEPMNAK-VQGPDGKEVPVHMGSYGIGVSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDEACD 361 (439)
T ss_pred ----cccc---cHhcCCE-EECCCCCEEeEEEeeeECCHHHHHHHHHHHhCccCCCcCCCCcCCeEEEEEecCCCCHHHH
Confidence 1122 2333321 01122233323334678899999998862 3344444578899999983 24567
Q ss_pred HHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 001059 1079 VERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156 (1170)
Q Consensus 1079 ~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~ 1156 (1170)
.+|.+++..||+.|++|+++.. +.++++++++|+..|+|++|+||++|+++|+|+||++.++++..++++++++.+.
T Consensus 362 ~~a~~i~~~L~~~Gi~v~~D~~-~~~lg~ki~~a~~~giP~~iiVG~~e~~~~~V~vr~r~~~~~~~v~~~el~~~i~ 438 (439)
T PRK12325 362 AACEKLYAALSAAGIDVLYDDT-DERPGAKFATMDLIGLPWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLT 438 (439)
T ss_pred HHHHHHHHHHHHCCCEEEEECC-CCCHhHHHHHHHHcCCCEEEEECCcccccCeEEEEEcCCCceEEEEHHHHHHHHh
Confidence 8999999999999999998876 6799999999999999999999999999999999999999999999999987764
No 423
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.3e-29 Score=291.39 Aligned_cols=246 Identities=24% Similarity=0.329 Sum_probs=199.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+..++||.|+||+||+|.|...|+ +||||++.. ..+......+++|+.+|.+++|||++++++.|+..
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 4456899999999999999976665 689998863 34445567899999999999999999999988431
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.+-||++|++ |.|.++++. ++.+-....+.|.+||++||.|||
T Consensus 771 -----------------------------------~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe 815 (1177)
T KOG1025|consen 771 -----------------------------------TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE 815 (1177)
T ss_pred -----------------------------------hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 2568999998 699999875 456888889999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
.++++||||-.+|||+..-.++||.|||+|+.+...... .......-.+-|||-|.+.. ..|+.++
T Consensus 816 ~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e-------------y~~~~gK~pikwmale~i~~-~~~thqS 881 (1177)
T KOG1025|consen 816 EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE-------------YSAPGGKVPIKWMALESIRI-RKYTHQS 881 (1177)
T ss_pred hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc-------------ccccccccCcHHHHHHHhhc-cCCCchh
Confidence 999999999999999999999999999999987544311 11122234567999998887 6799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++||++| |+....-+++. .+.+++...+.++.++-++.-++.+||..|+..||+++++...
T Consensus 882 DVWsfGVtiWElmTFGa~Py~gi~~~eI~--dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 882 DVWSFGVTIWELMTFGAKPYDGIPAEEIP--DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred hhhhhhhhHHHHHhcCCCccCCCCHHHhh--HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 99999999999998 77765555443 2333555555666677799999999999999999999998753
No 424
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=9e-29 Score=251.54 Aligned_cols=199 Identities=27% Similarity=0.455 Sum_probs=164.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++..+..||+|+||.|-+.+|..+|...|+|.++..-.+ ....+.++|+.+..+. .+|.+|.+||+++..
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re------ 117 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-QEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE------ 117 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh-HHHHHHHHhhhhhccCCCCCeEEEeehhhhcc------
Confidence 35666778999999999999999999999999999865443 4456788898877665 799999999987543
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHH----HHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV----FESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~----l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
..+||.||.|+.||..+ +...+.++|...-+++..+++||.|
T Consensus 118 ----------------------------------gdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~ 163 (282)
T KOG0984|consen 118 ----------------------------------GDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEF 163 (282)
T ss_pred ----------------------------------ccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHH
Confidence 45799999999887654 4556779999999999999999999
Q ss_pred HHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---C
Q 001059 509 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---P 584 (1170)
Q Consensus 509 LHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~ 584 (1170)
||++ .+||||+||+||||+.+|++||||||++-.+... ...+...|--.|||||.+... .
T Consensus 164 L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS----------------iAkt~daGCkpYmaPEri~~e~n~~ 227 (282)
T KOG0984|consen 164 LHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS----------------IAKTMDAGCKPYMAPERINPELNQK 227 (282)
T ss_pred HHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh----------------hHHHHhcCCCccCChhhcCcccCcc
Confidence 9986 7999999999999999999999999999765322 112334677889999987642 2
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCch
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTA 609 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~ 609 (1170)
.|+-++||||||++++||.+ ||..+
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred cceeehhhhhhhhhhhhhhhcccccccc
Confidence 58999999999999999985 66544
No 425
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=5.9e-29 Score=283.56 Aligned_cols=197 Identities=29% Similarity=0.501 Sum_probs=170.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--Ch----hhHHHHHHHHHHHHhcc---CCCceeEEEEEe
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SL----PVNDRILREVATLSRLQ---HQHVVRYYQAWF 424 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~--~~----~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~ 424 (1170)
..+|..++.||.|+||.|++|.++.+...|+||.|.+... +. +....+--|+.+|+.++ |+||+++++.|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 4679999999999999999999999999999999975431 11 11224557999999997 99999999887
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-C-cHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
++..++||+||-.+ | +|.+++.....++|.++..+++||
T Consensus 639 ---------------------------------------Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV 679 (772)
T KOG1152|consen 639 ---------------------------------------EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQV 679 (772)
T ss_pred ---------------------------------------ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHH
Confidence 34678999999985 5 999999999999999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.|+++||++||||||||-+|+.++.+|-+||+|||.|...... ....++||..|+|||++.|
T Consensus 680 ~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-----------------pfd~f~gtv~~aapevl~g 742 (772)
T KOG1152|consen 680 VAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-----------------PFDVFVGTVDYAAPEVLGG 742 (772)
T ss_pred HhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCC-----------------CcceeeeeccccchhhhCC
Confidence 99999999999999999999999999999999999999865321 1245799999999999999
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFS 607 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~ 607 (1170)
.++.+..-|||++||+||.++. ||+
T Consensus 743 ~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 743 EKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CccCCCcchhhhhhheeeEEEeccCCCc
Confidence 7777899999999999999874 664
No 426
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=8.9e-26 Score=238.88 Aligned_cols=212 Identities=38% Similarity=0.710 Sum_probs=181.1
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 442 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~ 442 (1170)
||.|++|.||++....+|+.+++|++....... ....+.+|+..++.++|++|+++++++..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------------- 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED----------------- 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec-----------------
Confidence 689999999999998889999999987543321 34678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 443 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+++|||++ ++|.+++... ..++...++.++.+++.++++||++|++|+||+
T Consensus 63 -----------------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~ 119 (215)
T cd00180 63 -----------------------ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119 (215)
T ss_pred -----------------------CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 256799999998 6999998766 578999999999999999999999999999999
Q ss_pred CCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHH
Q 001059 521 PNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599 (1170)
Q Consensus 521 p~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL 599 (1170)
|.||+++. ++.++|+|||.+........ ......+...|++||.+.....++.++|+||+|+++
T Consensus 120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~ 184 (215)
T cd00180 120 PENILLDSDNGKVKLADFGLSKLLTSDKS---------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184 (215)
T ss_pred HhhEEEeCCCCcEEEecCCceEEccCCcc---------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence 99999999 89999999999986532210 112346788999999987733688999999999999
Q ss_pred HHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 600 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 600 ~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++| ..+.+++.+|++.||.+||++.++++++
T Consensus 185 ~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 185 YEL-------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHH-------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 999 4788899999999999999999999763
No 427
>PRK04173 glycyl-tRNA synthetase; Provisional
Probab=99.94 E-value=8.3e-26 Score=268.90 Aligned_cols=324 Identities=15% Similarity=0.126 Sum_probs=226.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHH--cCCccccccce------eccCCCcccccceEEEe--------c------
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQ--HCAKHLEIEPM------YLLGDCPQFKRNTVKLL--------T------ 771 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~--~Gy~~I~tP~~------~~~~~~~~~~~~my~f~--------D------ 771 (1170)
-..|+.|++|..+.+++.|++.+++.|.. +||.+|.||++ ..+|+.+.+.+.||... |
T Consensus 26 ~~~g~~d~~P~G~~l~~~i~~~~r~~~~~~~~~~~ev~tp~i~~~~l~~~SGH~~~f~d~m~~~~~~~~~~r~d~~~~~~ 105 (456)
T PRK04173 26 GLAGFWDYGPLGVELKNNIKRAWWKSFVQEREDVVGIDSPIIMPPEVWEASGHVDNFSDPLVECKKCKKRYRADHLIEEL 105 (456)
T ss_pred chhcccccChhhHHHHHHHHHHHHHHHHhccCCEEEEeccccCCHHHHhhcCCccccCCceeEeCCCCCEeechhhhHHH
Confidence 35799999999999999999999999988 89999999999 33445566666666653 1
Q ss_pred -------------------------------------------------cCCceeeecCCCC----HHHHHHHHhCC-CC
Q 001059 772 -------------------------------------------------HGGDLLELSHELR----LPFIRWAISNQ-KS 797 (1170)
Q Consensus 772 -------------------------------------------------~~G~~laLRPD~T----~~iaR~~~~~~-~~ 797 (1170)
.++..+.||||.. +.+.+.+-+++ ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~m~cp~~~~~~~~~~~~f~l~f~~~~g~~~~~~~~~~lRpetaqg~~~~f~~~~~syr~dL 185 (456)
T PRK04173 106 GIDAEGLSNEELKELIRENDIKCPECGGENWTEVRQFNLMFKTFIGPVEDSKSLGYLRPETAQGIFVNFKNVLRTARKKL 185 (456)
T ss_pred hhhhccccHHHHHHHHHHhCCCCCCCCCCCCcCccchhhceeecccCccCCCcceeeccccchhHHHHHHHHHHhccccC
Confidence 1123456888644 23456666666 78
Q ss_pred ceeEEEecCeEEcCCCCC----CCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHH
Q 001059 798 SFKRYEISSVYRRAIGHS----PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWS 871 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~~----~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~ 871 (1170)
|+|++++|+|||+|.... |.|||+|..+++|+.++...+ ..+|.++.+++..+|+.. .
T Consensus 186 Plr~aq~g~~~RnE~s~~~gL~RvReF~q~e~hiF~~peq~~~e~~~~l~~~~~~l~~lG~~~-~--------------- 249 (456)
T PRK04173 186 PFGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDNEWFAYWIELRKNWLLDLGIDP-E--------------- 249 (456)
T ss_pred CeeeeEEchhHhCccCCCCCceeeceeeeeEEEEEECcChHHHHHHHHHHHHHHHHHHcCCCc-c---------------
Confidence 999999999999985432 556799999999998775322 233444444444444432 2
Q ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh
Q 001059 872 WAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK 951 (1170)
Q Consensus 872 ~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~ 951 (1170)
T Consensus 250 -------------------------------------------------------------------------------- 249 (456)
T PRK04173 250 -------------------------------------------------------------------------------- 249 (456)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccC-CCcccccccceeccccccchhhh--hcccccccc
Q 001059 952 PTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE-KYPATLVEGTLLAVGGRYDYLLH--RMWDREYVG 1028 (1170)
Q Consensus 952 ~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~-~~~~~~~~~~~I~~GGRYD~L~~--~fg~~~~~~ 1028 (1170)
++.++....++++||++.+|++.+... +. ......++++||+|| |.. .|++.+ +.
T Consensus 250 ------------------~~~~s~~~~~e~~~ys~~~wd~e~~~~~g~--~~~e~~g~~~~~dyd-L~~~~~~s~~d-l~ 307 (456)
T PRK04173 250 ------------------NLRFREHLPEELAHYSKATWDIEYKFPFGR--FWGELEGIANRTDYD-LSRHSKHSGED-LS 307 (456)
T ss_pred ------------------ceEEEecCcchhhccHHHHHhHHHhCCCCC--cEEEEeeeeccchhh-cccchhhcCCC-eE
Confidence 344444444455555555554432110 00 000112578899999 653 344333 12
Q ss_pred cC----CCCCCCC-ceEEeccHHHH-HhhccCCC--------------CCCCCCCCceEEEEEcCCC-ccHHHHHHHHHH
Q 001059 1029 YA----SRTNPPS-GVGASLALETI-IQHYPVDF--------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAE 1087 (1170)
Q Consensus 1029 ~~----g~~~~~p-AvGfaiglerL-~~~L~~~~--------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~ 1087 (1170)
+. ++....| .+|+|+|+||| +++|.++. ..+...+|.+|+|++.+++ .....|.++++.
T Consensus 308 y~~~~~~~~~~~P~vi~~siGieRl~~ail~~~~~~~~~~~~~~r~~l~~P~~lAP~qV~Iipi~~~~e~~~~A~~la~~ 387 (456)
T PRK04173 308 YFDDETTGEKYIPYVIEPSAGLDRLLLAFLEDAYTEEELGGGDKRTVLRLPPALAPVKVAVLPLVKKEKLSEKAREIYAE 387 (456)
T ss_pred EEecCCCCceeeeEEEEecccHHHHHHHHHHHHcccccccCCcceeEEECCCcCCCCEEEEEEecCcHHHHHHHHHHHHH
Confidence 11 1111134 55999999996 45544221 2223467889999998632 367899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 001059 1088 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1088 LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
||+. ++|+++. .+++++++++|++.|+|++|+||++|+++|+|+||++.+++|..++++++++.+.+.
T Consensus 388 LR~~-irVelD~--~~slgkkir~A~~~Gip~~IIIG~~El~~g~VtvR~r~t~eq~~v~l~el~~~l~~~ 455 (456)
T PRK04173 388 LRKD-FNVDYDD--SGSIGKRYRRQDEIGTPFCITVDFDTLEDNTVTIRDRDTMEQVRVKIDELKDYLAEK 455 (456)
T ss_pred HHhc-CEEEEeC--CCCHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEEeHHHHHHHHHhh
Confidence 9999 9999874 358999999999999999999999999999999999999999999999998887653
No 428
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=7.2e-27 Score=261.05 Aligned_cols=267 Identities=24% Similarity=0.390 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|..+.+||.|+|++||++.+.. .++.||+|.|..... ..++.+|++.|..+ -+.||+++.+|+-
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~r----- 105 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFR----- 105 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhc-----
Confidence 4678899999999999999999987 688999999875433 35688999999999 6899999998862
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+||+|.+. ...+++.. ++-.++..|++.++.||++
T Consensus 106 -----------------------------------nnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~ 147 (418)
T KOG1167|consen 106 -----------------------------------NNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAH 147 (418)
T ss_pred -----------------------------------cCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhh
Confidence 35678999999986 56666544 6788999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC-CCEEEeecCcchhcccccc---ccC----CCCC-------C-------CCCCcc----
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQL---DQD----AAFP-------T-------DTGGVS---- 562 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~---~~~----~~~~-------~-------~~~~~~---- 562 (1170)
+|++|||||||||+|+|.+.. +.-.|.|||+|........ ... ...+ . .+.+..
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~ 227 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN 227 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence 999999999999999999865 6788999999984322110 000 0111 0 000111
Q ss_pred ----ccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHH-HHHHHH------------hhhc
Q 001059 563 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSD------------LKQK 622 (1170)
Q Consensus 563 ----~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~------------l~~~ 622 (1170)
...-...||++|.|||++.+++..+.++||||.|||+.-+++ ||....+. .....+ ....
T Consensus 228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~ 307 (418)
T KOG1167|consen 228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP 307 (418)
T ss_pred CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcC
Confidence 112345799999999999998889999999999999999986 87633221 100000 0000
Q ss_pred CC-----------------------------------CCCccccCC-HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 623 GE-----------------------------------LPPSWVAKF-SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 623 ~~-----------------------------------~p~~~~~~~-~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+. .+..+.... ..+.+|+.+||..||.+|.|++++|+||||...
T Consensus 308 g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 308 GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred CceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 001122222 257899999999999999999999999999954
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 388 ~ 388 (418)
T KOG1167|consen 388 D 388 (418)
T ss_pred h
Confidence 3
No 429
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=6.1e-27 Score=300.92 Aligned_cols=198 Identities=25% Similarity=0.398 Sum_probs=141.2
Q ss_pred cEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccc
Q 001059 467 TYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 545 (1170)
Q Consensus 467 ~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~ 545 (1170)
..++.+|||++++|.+++.. ...+++.+++.++.||++||+|||++||+||||||+||||+..+.+|++|||++.....
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 45788899999999999975 34599999999999999999999999999999999999997655555555554432211
Q ss_pred cccc-----------------cC--CCCCCC-CCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcC
Q 001059 546 EQLD-----------------QD--AAFPTD-TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 605 (1170)
Q Consensus 546 ~~~~-----------------~~--~~~~~~-~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltP 605 (1170)
.... .. ...... ...........+||++|||||++.+ ..|+.++|||||||+||||++|
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHHHHHHhhC
Confidence 0000 00 000000 0000111233579999999999987 5689999999999999999997
Q ss_pred CCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 606 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 606 f~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+.+..........+.. ...|+......+...+++.+||++||.+||++.++++|||+...
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 212 VSSREEKSRTMSSLRH-RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCchhhHHHHHHHHHH-hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 7655443333332222 22333333345677899999999999999999999999999764
No 430
>TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I. Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent families. This family includes the archaeal enzyme, the Pro-specific domain of a human multifunctional tRNA ligase, and the enzyme from the spirochete Borrelia burgdorferi. The other family includes enzymes from Escherichia coli, Bacillus subtilis, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae.
Probab=99.93 E-value=1.8e-25 Score=267.77 Aligned_cols=328 Identities=9% Similarity=0.086 Sum_probs=227.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccC----CceeeecC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSH 781 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRP 781 (1170)
..++|+.+|+|.+..+++.|++.+++.++++||++|.||.| .+.. +.+.+.++||++.|.+ ++.++|||
T Consensus 25 ~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~f~v~~~g~~~~~e~l~LrP 104 (472)
T TIGR00408 25 YPVKGCYVWLPYGFKIWKNIQKILRNILDEIGHEEVYFPMLIPESELAKEKDHIKGFEPEVYWITHGGLSKLDEPLALRP 104 (472)
T ss_pred cCCCceEEECcCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhhcchhhhcchhcEEEecCCCCccCCcEEEeC
Confidence 45799999999999999999999999999999999999999 3332 2445688999999987 48999999
Q ss_pred CCCHHHHHHHH----hCCCCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCCCcccHH---HHHHHHHHHHH-H
Q 001059 782 ELRLPFIRWAI----SNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVT-R 849 (1170)
Q Consensus 782 D~T~~iaR~~~----~~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l~-~ 849 (1170)
+.|++++.+++ +++..|+|+|++|+|||+|.++ .|.+||+|.+++.+-.....++. +++.+..+++. .
T Consensus 105 t~e~~i~~~~~~~i~S~rdLPlr~~q~~~vfR~E~~~~~gl~R~rEF~~~e~h~~~~~~e~a~~e~~~~l~~y~~i~~~~ 184 (472)
T TIGR00408 105 TSETAMYPMFKKWVKSYTDLPLKINQWVNVFRYETKHTRPFLRTREFTWQEAHTAHATAEEAEEQVLRALDIYKEFIENS 184 (472)
T ss_pred CCcHHHHHHHhccccChhhcCHHHhheeeeecCCCCCCCCcceeeeeehhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999995544 4556799999999999998754 45668999999844333233333 55667777776 7
Q ss_pred cCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 001059 850 FFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929 (1170)
Q Consensus 850 lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 929 (1170)
||++ +.+... ++ + ++
T Consensus 185 lglp--~~~~~~--------------~~-~-----------ek------------------------------------- 199 (472)
T TIGR00408 185 LAIP--YFVGRK--------------PE-W-----------EK------------------------------------- 199 (472)
T ss_pred cCCe--EEEEec--------------Cc-h-----------hh-------------------------------------
Confidence 7774 322110 00 0 00
Q ss_pred HHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceec
Q 001059 930 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLA 1009 (1170)
Q Consensus 930 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~ 1009 (1170)
+.|.. ..+.++..+.-|-..-.|++|..
T Consensus 200 --~~ga~--------------------------------~~~~~e~~~~dgr~~q~~t~~~L------------------ 227 (472)
T TIGR00408 200 --FAGAE--------------------------------YTWAFETIMPDGRTLQIATSHNL------------------ 227 (472)
T ss_pred --cCCcc--------------------------------ceEEEeEEEcCCCEEEEeeeecc------------------
Confidence 00000 00111110000111112233211
Q ss_pred cccccchhhhhcccccccccCCCCCCCCceEEeccH-HHHHhhcc------CCCCCCCCCCCceEEEEEc--CC---Ccc
Q 001059 1010 VGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSR--GG---GGL 1077 (1170)
Q Consensus 1010 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-erL~~~L~------~~~~~~~~~~~~~vlv~~~--~~---~~~ 1077 (1170)
|- ++.++|+-. +... ++.+....-+++|+ +|++.+|. .+...+...+|.+|+|+++ +. +..
T Consensus 228 -g~---~~sk~f~i~-y~~~--~g~~~~~h~~s~Gi~eRli~~lie~~~d~~gl~~P~~iaP~qV~Iipi~~~~~~~~~~ 300 (472)
T TIGR00408 228 -GQ---NFAKTFEIK-FETP--TGDKEYAYQTSYGISTRVIGALIAIHSDEKGLVLPPRVAPIQVVIIPIIFKKKENEKV 300 (472)
T ss_pred -cc---cccHhcCCE-EECC--CCCEEeeEEccccHHHHHHHHHHHHhCCCCceeeChhhCcceEEEEEccCCCCCCHHH
Confidence 00 112222210 0000 11122344467777 99988872 2223334467889999996 31 246
Q ss_pred HHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 001059 1078 LVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1078 ~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~ 1157 (1170)
...|.++++.||+.|++|+++.. +.++++++++|+++|+|++|+||++|+++|+|+||++++++|..++++++++.+.+
T Consensus 301 ~~~A~~l~~~Lr~~girv~lD~r-~~s~gkk~k~Ae~~GvP~~IiIG~~Ele~~~V~ik~rdt~eq~~v~l~el~~~l~~ 379 (472)
T TIGR00408 301 MEAAREVRSRLKKAGFRVHIDDR-DNRPGRKFYQWEIKGIPLRIEVGPNDIEKNIAVISRRDTGEKYQVSLDQLEERVVE 379 (472)
T ss_pred HHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECcchhhCCeEEEEECCCCceEEEEHHHHHHHHHH
Confidence 78999999999999999998876 46999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhhccC
Q 001059 1158 AIASQFRN 1165 (1170)
Q Consensus 1158 ~l~~~~~~ 1165 (1170)
+++..++|
T Consensus 380 ~l~~~~~~ 387 (472)
T TIGR00408 380 LLNNIQEN 387 (472)
T ss_pred HHHHHHHH
Confidence 87766654
No 431
>PRK08661 prolyl-tRNA synthetase; Provisional
Probab=99.93 E-value=1.1e-24 Score=261.47 Aligned_cols=327 Identities=12% Similarity=0.108 Sum_probs=228.2
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccC----CceeeecCCC
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GDLLELSHEL 783 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G~~laLRPD~ 783 (1170)
++|+.+|+|..+.+++.|++.+++.|.++||++|.||.| .+. ++.+.+.++||++++.+ ++.++|||+.
T Consensus 33 v~G~~~~~P~g~~i~~~i~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~~~v~~~~~~~~~e~l~LrPts 112 (477)
T PRK08661 33 VKGCMVIKPYGYAIWENIQKILDKLFKETGHENVYFPLLIPESLLEKEKEHVEGFAPEVAWVTHGGGEKLEEKLALRPTS 112 (477)
T ss_pred CCceEEECccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhhcCchhhcccccEEEEccCCCccCceEEEecCC
Confidence 689999999999999999999999999999999999999 332 23556689999999977 5689999998
Q ss_pred ----CHHHHHHHHhCCCCceeEEEecCeEEcCCCC---CCCCceeEeEEEEeCCCCcccHH---HHHHHHHHHH-HHcCC
Q 001059 784 ----RLPFIRWAISNQKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDIV-TRFFH 852 (1170)
Q Consensus 784 ----T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l-~~lgi 852 (1170)
|..++|++.+++..|+|+|++|+|||+|... .|.+||+|.+.+.+-.....++. +++.+..+++ +.||+
T Consensus 113 E~~i~~~~~~~i~SyrdLPlrl~q~~~vfR~E~~~rgl~R~rEF~~~E~h~~~~~~eea~~e~~~~l~~y~~i~~~~Lgl 192 (477)
T PRK08661 113 ETIIYPMYKKWIQSYRDLPLLYNQWVNVVRWETKTRPFLRTREFLWQEGHTAHATEEEAEEETLEMLEIYKEFFEDYLAI 192 (477)
T ss_pred cHHHHHHHHhhhcchhhcCHHHhcccceeeCCCCCCCcceeeeEEEcceeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888898888888899999999999997653 35567999999976544334443 4556666666 66666
Q ss_pred CcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHh
Q 001059 853 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 932 (1170)
Q Consensus 853 ~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 932 (1170)
. +.+ +.. ++ + + ..
T Consensus 193 p--~~~--~~~------------~~-~-----------e---------------------------------------kf 205 (477)
T PRK08661 193 P--VII--GKK------------TE-W-----------E---------------------------------------KF 205 (477)
T ss_pred e--EEE--Eec------------Ch-H-----------H---------------------------------------hh
Confidence 4 221 110 00 0 0 00
Q ss_pred cCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccc
Q 001059 933 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012 (1170)
Q Consensus 933 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GG 1012 (1170)
.|. ...+.+|..+..|...-.|++|..-.
T Consensus 206 ~ga--------------------------------~~~~~ie~~~~dgr~~q~gt~~~Lg~------------------- 234 (477)
T PRK08661 206 AGA--------------------------------DYTYTIEAMMPDGKALQAGTSHYLGQ------------------- 234 (477)
T ss_pred CCC--------------------------------cceeEEEEEeCCCCEEEEEEeccccc-------------------
Confidence 010 00111121111122222333332100
Q ss_pred ccchhhhhcccccccccCCCCCCCCceEEeccH-HHHHhhcc------CCCCCCCCCCCceEEEEEcC-----CCccHHH
Q 001059 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSRG-----GGGLLVE 1080 (1170)
Q Consensus 1013 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-erL~~~L~------~~~~~~~~~~~~~vlv~~~~-----~~~~~~~ 1080 (1170)
++.++|+-. +...-|... ...=.++|+ +|++.+|. .+...+...+|.+|+|++.. .+.....
T Consensus 235 ---~~s~~f~i~-y~d~~g~~~--~v~~~s~G~~~R~i~alie~~~D~~Gl~lP~~iAP~qV~Iipi~~~~~~~~~~~~~ 308 (477)
T PRK08661 235 ---NFAKAFDIK-FQDKDGKLE--YVHQTSWGVSTRLIGALIMTHGDDKGLVLPPKIAPIQVVIVPIFKKEEKKEEVLEY 308 (477)
T ss_pred ---chhHhcCCE-EECCCCCEe--eeEEecccHHHHHHHHHHHHhCccCCCccCcccCCCeEEEEEecCCCcCCHHHHHH
Confidence 112222110 000111111 122224444 99988774 22233344568899999982 1456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1081 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1081 a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
|.++++.||+.|++|++++..+.++++++++|+++|+|++|+||++|+++|+|+|++++++++..++++++++.+...|+
T Consensus 309 a~~l~~~Lr~~GirV~lD~r~~~s~gkK~~~ae~~GvP~~IiIG~~ele~~~V~ik~rdtgek~~v~~~el~~~l~~~l~ 388 (477)
T PRK08661 309 AKELAEELKKAGIRVKLDDRSDKTPGWKFNEWELKGVPLRIEIGPRDLENNTVVLVRRDTLEKETVPLDELVEKVPELLE 388 (477)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECcchhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHH
Confidence 99999999999999998874478999999999999999999999999999999999999999999999999999988887
Q ss_pred hhccC
Q 001059 1161 SQFRN 1165 (1170)
Q Consensus 1161 ~~~~~ 1165 (1170)
..++|
T Consensus 389 ~~~~~ 393 (477)
T PRK08661 389 EIQEN 393 (477)
T ss_pred HHHHH
Confidence 66654
No 432
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.8e-26 Score=241.64 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=187.9
Q ss_pred CCCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 001059 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 424 (1170)
Q Consensus 346 ~~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~ 424 (1170)
..++.-.+.+.|.+.+.||+|.||.+.+|+|+.++..+|+|.++.... ...+|.+|+..--.| .|.||+.-|+.-+
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 345556677899999999999999999999999999999999875433 467899998765455 5899987665433
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
+ ...+++++||||| |+|..-+.. ..+-+....+++.|++
T Consensus 92 q---------------------------------------t~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~ 131 (378)
T KOG1345|consen 92 Q---------------------------------------TSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLL 131 (378)
T ss_pred h---------------------------------------cCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHH
Confidence 2 3468899999998 788887665 4588889999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
+|+.|+|++++||||||.+||||-. ...+||||||+++..... -.....+..|.+||...
T Consensus 132 SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t------------------V~~~~~~~~y~~pe~~~ 193 (378)
T KOG1345|consen 132 SAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT------------------VKYLEYVNNYHAPELCD 193 (378)
T ss_pred HHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce------------------ehhhhhhcccCCcHHHh
Confidence 9999999999999999999999943 357999999998854210 01123456789999754
Q ss_pred CC----CCCCccchhHHHHHHHHHhhc---CCCchhHHH-----HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 582 GW----PKIDEKADMYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 582 ~~----~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~-----~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
.. -..++.+|+|.|||++|.++| ||....-+. ......+.....|..+...++.+..+.++-|.++|+
T Consensus 194 ~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~ 273 (378)
T KOG1345|consen 194 TVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFK 273 (378)
T ss_pred hccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccc
Confidence 32 225788999999999999998 665332211 111112223456777778889999999999999999
Q ss_pred CC
Q 001059 650 DR 651 (1170)
Q Consensus 650 ~R 651 (1170)
+|
T Consensus 274 dr 275 (378)
T KOG1345|consen 274 DR 275 (378)
T ss_pred cc
Confidence 99
No 433
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=1.5e-25 Score=245.77 Aligned_cols=249 Identities=17% Similarity=0.215 Sum_probs=196.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+++....+-+|.||.||.|.|+.. .+.|-+|.++ ...+.-....++.|-..|..+.|||+.++.+.+.+.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk-~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~--- 359 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVK-QHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED--- 359 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHH-hcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec---
Confidence 4567777899999999999988743 2346677765 334555567899999999999999999999888552
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------CCCCHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 500 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~ 500 (1170)
....++++.+.+ |+|..++..+ +.++..+...++.
T Consensus 360 ------------------------------------~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas 403 (563)
T KOG1024|consen 360 ------------------------------------YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS 403 (563)
T ss_pred ------------------------------------cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH
Confidence 234467778887 7899988733 2367778889999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
|++.||+|||++|+||.||-.+|++|++...+||+|=.+++.+-+.++ .+-+.+......||+||.+
T Consensus 404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DY-------------hcLGDnEnRPvkWMslEal 470 (563)
T KOG1024|consen 404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDY-------------HCLGDNENRPVKWMSLEAL 470 (563)
T ss_pred HHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccc-------------cccCCCCCCcccccCHHHH
Confidence 999999999999999999999999999999999999999987643221 1122233456689999999
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+. ..|+.++|+|||||+||||+| |+..-++.+..... ..+.....+.+++.++..+|..||..+|++||+++|
T Consensus 471 ~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 471 QN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred hh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH--hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 98 679999999999999999996 88766655443322 244444455678889999999999999999999999
Q ss_pred HHh
Q 001059 657 LLQ 659 (1170)
Q Consensus 657 iL~ 659 (1170)
+.+
T Consensus 548 lv~ 550 (563)
T KOG1024|consen 548 LVI 550 (563)
T ss_pred HHH
Confidence 875
No 434
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=5.3e-24 Score=229.77 Aligned_cols=209 Identities=33% Similarity=0.571 Sum_probs=171.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++++..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----------- 68 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED----------- 68 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec-----------
Confidence 56788999999999999999988999999998754332 245688899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~-l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....++++||+++ +|.+++..... +++..++.++.+++.++.|||++++
T Consensus 69 -----------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 69 -----------------------------PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred -----------------------------CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3567899999986 99999987766 8999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||+|.||+++.++.++|+|||++....... + .......++..|++||.+.+...++.++|+||
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-----------~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~ 185 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDL-----------A---ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS 185 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----------c---ccccceeccCCcCCHhHhcCCCCCCchhhHHH
Confidence 999999999999999999999999998653221 0 01133568889999999843356788999999
Q ss_pred HHHHHHHhhc---CCCc-hhHHHHHHHHhh
Q 001059 595 LGIVFFELWH---PFST-AMERQIVLSDLK 620 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~-~~~~~~~~~~l~ 620 (1170)
||+++|+|++ ||.. ........+.+.
T Consensus 186 lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 186 LGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred HHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 9999999996 7865 344444444443
No 435
>PLN02837 threonine-tRNA ligase
Probab=99.91 E-value=2.2e-23 Score=257.38 Aligned_cols=352 Identities=15% Similarity=0.132 Sum_probs=243.4
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
...|+..|+|..+.+++.+++.+++...++||++|.||.+ ...++.+...++||++.|..++.++||| +++|.
T Consensus 235 ~g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~y~l~p-~~~p~ 313 (614)
T PLN02837 235 AGGGLVFWHPKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIEDELYQLRP-MNCPY 313 (614)
T ss_pred cCCcceEEechHHHHHHHHHHHHHHHHHHCCCEEEECCccCCHHHHhhcCCcccchhhcccccCCCCceEEECC-CCcHH
Confidence 4678999999999999999999999999999999999999 3345577889999999998889999999 55554
Q ss_pred -HHHHHh----CCCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcc
Q 001059 788 -IRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 788 -aR~~~~----~~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~ 855 (1170)
+-++.. ++..|+|++++|+|||+|..+ -|.++|+|.+.++|..++...+ .+++.++.++++.||+..
T Consensus 314 ~~~~~~~~~~SyrdLPlr~~~~~~~~R~E~~g~~~GL~RvreF~~~e~h~f~~~~q~~~e~~~~l~~~~~~~~~lg~~~- 392 (614)
T PLN02837 314 HILVYKRKLHSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILKQFGFSK- 392 (614)
T ss_pred HHHHHhCccCChhHCCHhhEeecccccCCCCCCCcCcccccceEECeEEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 444443 234699999999999998742 2566799999999988765322 378999999999999974
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++.+. -+.+|-++.|...-+.+-.. +...++.-.....-.+
T Consensus 393 ~~~~~~t~~-----~~~~g~~~~w~~~~~~l~~~----------------------l~~~~~~~~~~~g~~a-------- 437 (614)
T PLN02837 393 YEINLSTRP-----EKSVGSDDIWEKATTALRDA----------------------LDDKGWEYKVDEGGGA-------- 437 (614)
T ss_pred EEEEecCCc-----hhccCCHHHHHHHHHHHHHH----------------------HHHcCCCceeCCCccc--------
Confidence 788888753 13455544443322211111 1111110000000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
.+| .++.+-+...-|..+-.|++--.+. -+-|||
T Consensus 438 ----------------------------fyg--pkid~~~~d~~gr~~q~~tiqldf~----------------~~~~f~ 471 (614)
T PLN02837 438 ----------------------------FYG--PKIDLKIEDALGRKWQCSTIQVDFN----------------LPERFD 471 (614)
T ss_pred ----------------------------ccC--cceeeEeeccCCceeeecceeEeec----------------chhhcC
Confidence 011 1222222221233444444321110 122333
Q ss_pred hhhhhcccccccccCCCCCCCCce-EEec--cHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGV-GASL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAv-Gfai--glerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
-- | ...-|.+. .|-+ .-++ ++||++.+|.+ +..+ ...+|.+|+|++.+ +....+|.++++.||
T Consensus 472 l~---y-----~~~d~~~~-~pv~ih~~~~G~~eRlia~Lie~~~g~~P-~~laP~qV~IIpi~-~~~~~~A~~Ia~~Lr 540 (614)
T PLN02837 472 IT---Y-----VDSNSEKK-RPIMIHRAILGSLERFFGVLIEHYAGDFP-LWLAPVQARVLPVT-DNELEYCKEVVAKLK 540 (614)
T ss_pred cE---E-----ECCCCCcc-CCEEEEcCCccCHHHHHHHHHHHcCCCCC-CCCCCccEEEEEeC-hHHHHHHHHHHHHHH
Confidence 11 1 11122211 2222 2222 59999988753 3333 34578899999986 667899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.|++|++ .. ++++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.|.+.+++
T Consensus 541 ~~GirVev-~~-~~slgkkir~A~~~gip~~IiIG~~E~e~~~VtVr~r~~geq~~v~~~el~~~l~~~~~~ 610 (614)
T PLN02837 541 AKGIRAEV-CH-GERLPKLIRNAETQKIPLMAVVGPKEVETRTLTVRSRHGGELGTMPVDDFINRIQLAVEN 610 (614)
T ss_pred HCCCEEEE-eC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCEEEEEECCCCceeEeeHHHHHHHHHHHHhh
Confidence 99999998 44 578999999999999999999999999999999999999999999999999999888764
No 436
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.91 E-value=4.7e-25 Score=253.41 Aligned_cols=298 Identities=38% Similarity=0.672 Sum_probs=223.8
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+++.++|+....+|.|+||+|+.+..+.++..+|||.|..++.. ....+..+|+..+..+.|++|+++..+|.+....
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~ 122 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPL 122 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhcccchhhheeceecCCCC
Confidence 688999999999999999999999999988989999999876543 3456788999999999999999999999876541
Q ss_pred ccCCCC-C--CCCC------ccc---------------------------------c-----------------------
Q 001059 430 DFDGDS-M--WGSG------TLA---------------------------------S----------------------- 444 (1170)
Q Consensus 430 ~~~~~~-~--~~~g------~~~---------------------------------~----------------------- 444 (1170)
.+.... + ...+ .+. .
T Consensus 123 ~~qe~~d~~~l~~~~~~~~~~l~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~ 202 (516)
T KOG1033|consen 123 GWQEEMDLKLLDDETSSERSNLPSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSE 202 (516)
T ss_pred cccchhhhhhhhccCCcchhccccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhh
Confidence 000000 0 0000 000 0
Q ss_pred ---cc------ccc-------------------------------cccccccc---------------------------
Q 001059 445 ---ST------FSN-------------------------------RAASSADV--------------------------- 457 (1170)
Q Consensus 445 ---~~------~~~-------------------------------~~~~~~~~--------------------------- 457 (1170)
.. |.. ...+...+
T Consensus 203 ~rk~s~~k~~~~~~~~~tdsd~~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~ 282 (516)
T KOG1033|consen 203 FRKTSVSKASRFEGPDCTDSDLEEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV 282 (516)
T ss_pred hhhhhhccccccCCCccccccccccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhc
Confidence 00 000 00000000
Q ss_pred -------------------------------------ccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHH
Q 001059 458 -------------------------------------TGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAW 496 (1170)
Q Consensus 458 -------------------------------------~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~ 496 (1170)
..........++||.|++|. .+|.+|+.... ..+.....
T Consensus 283 d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~ 362 (516)
T KOG1033|consen 283 DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLML 362 (516)
T ss_pred cchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHH
Confidence 00000011347999999997 69999997543 36667888
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
.++.|++.|++| ++.+|||+||.||+...+..+||+|||+......... .......++..+||.+||+
T Consensus 363 ~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~---------~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 363 DIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET---------VAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred HHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc---------ccchhhhhhhcccccccCC
Confidence 999999999999 9999999999999999999999999999986532220 0111234677899999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
||++.+ ..|+.++||||||+||+|++++|....++...+..++ .+.+|+.+....|+...|+.+|+.+.|.+||++.+
T Consensus 431 PEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r-~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 431 PEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR-DGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred HHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh-cCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 999998 6899999999999999999999999999988888877 67788766666678889999999999999997766
Q ss_pred HHhccC
Q 001059 657 LLQDAL 662 (1170)
Q Consensus 657 iL~~~~ 662 (1170)
.-.|.|
T Consensus 509 ~~~~~~ 514 (516)
T KOG1033|consen 509 VALHEF 514 (516)
T ss_pred Hhhhhh
Confidence 655554
No 437
>PRK03991 threonyl-tRNA synthetase; Validated
Probab=99.91 E-value=3.1e-22 Score=244.79 Aligned_cols=347 Identities=14% Similarity=0.097 Sum_probs=237.9
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|..-|+|..+.+++.|.+.+++.+.++||++|.||.+ ...++.+.+..+||.+. .+++.++|||.-+++..
T Consensus 216 ~~G~~~~~P~G~~i~~~L~~~~~~~~~~~G~~~V~tP~~~~~~~~~~sgh~~~f~e~my~v~-~~~e~l~Lrp~~c~~~~ 294 (613)
T PRK03991 216 DVGHMRYYPKGRLIRDLLEDYVYNLVVELGAMPVETPIMYDLSHPAIREHADKFGERQYRVK-SDKKDLMLRFAACFGQF 294 (613)
T ss_pred CeeeEEEEcHHHHHHHHHHHHHHHHHHHCCCEEEECCeecChhHHhhcccccccchhceEec-CCCceEEEecCCCHHHH
Confidence 468889999999999999999999999999999999998 33345677789999984 44689999997776766
Q ss_pred HHHHh----CCCCceeEEEecC-eEEcCCCCC-----CCCceeEeEEEEeCCC-CcccH--HHHHHHHHHHHHHcCCCcc
Q 001059 789 RWAIS----NQKSSFKRYEISS-VYRRAIGHS-----PPNRYLQGDFDIIGGA-SALTE--AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 789 R~~~~----~~~~P~r~~Y~g~-VfR~e~~~~-----~~~ef~Q~GvEiiG~~-~~~aD--aEvi~la~~~l~~lgi~~~ 855 (1170)
.+... ++..|+|+|++|+ +||+|.+.. |.|+|+|.++++|+.+ +...+ .+++.++.++++.||+.
T Consensus 295 ~~~~~~~~SyrdLPlr~~e~~~~~fR~E~~g~l~GL~RvReF~~~D~h~f~~~~eqa~~e~~~~l~~~~~i~~~lGl~-- 372 (613)
T PRK03991 295 LMLKDMTISYKNLPLKMYELSTYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMEQAMEEFEKQYEMILETGEDLGRD-- 372 (613)
T ss_pred HHHhCCcCchhhCChhhheecchheeCCCCCCCcCcccccceEeeeEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence 55543 3356999999999 999987542 5567999999999985 33222 37799999999999995
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++.. ..+.+. . .+.+..++... +
T Consensus 373 ~~~~~~~t---~df~~~---~---~~~l~~~l~~~-------------------------g------------------- 399 (613)
T PRK03991 373 YEVAIRFT---EDFYEE---N---KDWIVELVKRE-------------------------G------------------- 399 (613)
T ss_pred eEEEecCH---HHHhhh---H---HHHHHHHHHHc-------------------------C-------------------
Confidence 77777642 111110 0 01111111111 1
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEec-cCCCcccccccceecccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSV-KEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~-~~~~~~~~~~~~~I~~GGRY 1014 (1170)
..-.+.++. |...|-|.-+++... ..+. .-+.+++=-|+.|
T Consensus 400 -------------------------------~~~~~~~~~----g~~~~yg~kie~~~~d~~gr---~~q~~T~qld~~~ 441 (613)
T PRK03991 400 -------------------------------KPVLLEILP----ERKHYWVLKVEFAFIDSLGR---PIENPTVQIDVEN 441 (613)
T ss_pred -------------------------------CCEEecccC----CccccCcCcEEEEEeCCCCC---EEEEeeeecCccc
Confidence 100000011 111111222222211 1111 0001112223333
Q ss_pred chhhhhcccccccccCCCCCCCC-ceEEe-cc-HHHHHhhccC---CC-------CCCCCCCCceEEEEEcCCCccHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPS-GVGAS-LA-LETIIQHYPV---DF-------KPVRNEAGTSVLVCSRGGGGLLVER 1081 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~p-AvGfa-ig-lerL~~~L~~---~~-------~~~~~~~~~~vlv~~~~~~~~~~~a 1081 (1170)
.++|+-. +....|... .| -+|.+ +| ++|++.+|.+ +. ..+...+|.+|+|++.+ +.....|
T Consensus 442 ---~~~f~l~-y~d~~g~~~-~Pviih~~~~GsieR~i~aliE~~~~~~~~g~gl~~P~~lAP~qV~IIpi~-e~~~~~A 515 (613)
T PRK03991 442 ---AERFGIK-YVDENGEEK-YPIILHCSPTGSIERVIYALLEKAAKEEEEGKVPMLPTWLSPTQVRVIPVS-ERHLDYA 515 (613)
T ss_pred ---chhCCCE-EECCCCCEe-eCEEEEECCEeHHHHHHHHHHHHhCCccccCceeEcCccccCceEEEEEeC-HHHHHHH
Confidence 2344321 112223222 34 44654 55 9999887742 11 13344678999999996 7788999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1082 ~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.++++.||+.|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.+.+.+++
T Consensus 516 ~eIa~~Lr~~GirV~lDdr-~~slgkKir~A~~~GiP~iIVIG~kEle~g~VtVr~R~t~eq~~v~l~eli~~l~~~~~~ 594 (613)
T PRK03991 516 EEVADKLEAAGIRVDVDDR-DESLGKKIRDAGKEWIPYVVVIGDKEMESGKLTVTIREESEKVEMTLEELIERIKEETKG 594 (613)
T ss_pred HHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhc
Confidence 9999999999999998876 679999999999999999999999999999999999999999999999999999888764
Q ss_pred h
Q 001059 1162 Q 1162 (1170)
Q Consensus 1162 ~ 1162 (1170)
.
T Consensus 595 ~ 595 (613)
T PRK03991 595 Y 595 (613)
T ss_pred C
Confidence 3
No 438
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=2.3e-23 Score=218.02 Aligned_cols=157 Identities=25% Similarity=0.366 Sum_probs=121.3
Q ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCC
Q 001059 478 RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 556 (1170)
Q Consensus 478 gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 556 (1170)
|+|.+++... ..+++.+++.++.||+.||+|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6788988864 45999999999999999999999999 999999999999999 999876421
Q ss_pred CCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh-cCCC-C---Cc
Q 001059 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGEL-P---PS 628 (1170)
Q Consensus 557 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~-~~~~-p---~~ 628 (1170)
....||+.|||||++.+ ..|+.++|||||||++|||++ ||............+.. .... + +.
T Consensus 62 ---------~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 62 ---------EQSRVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN 131 (176)
T ss_pred ---------ccCCCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence 11268999999999987 568999999999999999997 77544332222222211 1111 1 11
Q ss_pred cccCCH--HHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 629 WVAKFS--EQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 629 ~~~~~~--e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
...... ++.++|.+||+.||.+||++.++++|+|.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 112222 58999999999999999999999999754
No 439
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.5e-22 Score=234.09 Aligned_cols=176 Identities=19% Similarity=0.115 Sum_probs=130.8
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCC---ChhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
.....++|.+.+.||+|+||+||+|+++. +|+.||||++..... .......+.+|+.+|+.++|+||++.+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34456889999999999999999999886 688889998753211 222345689999999999999998633211
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
...|+|||||+| +|.. +.. .. ...++.|+++
T Consensus 91 -----------------------------------------~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~ 122 (365)
T PRK09188 91 -----------------------------------------GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHR 122 (365)
T ss_pred -----------------------------------------CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHH
Confidence 125899999976 6652 211 11 1467899999
Q ss_pred HHHHHHhCCccccCC-CCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 505 GLAHIHGQGIIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 505 gL~yLHs~gIiHrDL-Kp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
||.|||++||+|||| ||+|||++.++.+||+|||+|+.+.......... ...+-++.++++.|+|||.+..
T Consensus 123 aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~-------~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 123 ALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIA-------AYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred HHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhh-------hhhhhhhhhccCccCCcccCCh
Confidence 999999999999999 9999999999999999999999764321100000 0011246689999999998865
No 440
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=3e-21 Score=208.98 Aligned_cols=261 Identities=20% Similarity=0.311 Sum_probs=194.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-.|.+.++||+|+||+.+.|.+..++++||||.-+.+.. ..++..|....+.| ..++|..+| +|=
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vY-YFG--------- 93 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVY-YFG--------- 93 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCcee-eec---------
Confidence 479999999999999999999999999999997654433 34577788888888 468888876 220
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
++..+-.+|||+++.||.+++.-++ +|+...+..++.|++.-++|+|++
T Consensus 94 ------------------------------qeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k 143 (449)
T KOG1165|consen 94 ------------------------------QEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK 143 (449)
T ss_pred ------------------------------cccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence 1244557999999999999998665 599999999999999999999999
Q ss_pred CccccCCCCCceeecCCC-----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 513 GIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
.+|+|||||+|+||...+ .+.|+|||+|+.+..+...+...+ ..+.+..||.+||+--...| .+-+
T Consensus 144 ~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY--------rE~KSLsGTARYMSINTHlG-rEQS 214 (449)
T KOG1165|consen 144 DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY--------REHKSLSGTARYMSINTHLG-REQS 214 (449)
T ss_pred ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc--------ccccccccceeeeEeecccc-chhh
Confidence 999999999999997543 489999999999887765554432 34677899999999998888 5678
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
...|+-|||.+++++|. ||.+..- .+...+ .--.+|-|.-+.|...
T Consensus 215 RRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK----------------------------IGe~Kr~T~i~~Lc~g 266 (449)
T KOG1165|consen 215 RRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK----------------------------IGETKRSTPIEVLCEG 266 (449)
T ss_pred hhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH----------------------------hccccccCCHHHHHhc
Confidence 99999999999999884 7765422 111111 1234555555566655
Q ss_pred CCCCchHHHHHHHHHhcCCCCCccchhhhhccccc
Q 001059 662 LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFD 696 (1170)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 696 (1170)
|+.++...+.-...-.+...+|...+.+++.++++
T Consensus 267 ~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 267 FPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred CHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 55555443332222234455555556555555544
No 441
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=2.9e-20 Score=208.63 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=193.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHHHHHHHHHHHhccCC-CceeEEEEEeecCccccCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~l~Hp-nIV~l~~~~~e~~~~~~~~~ 434 (1170)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +|+++++.+..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--------- 69 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--------- 69 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec---------
Confidence 788899999999999999997 8899999976654433 567899999999999988 79999987722
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD---HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~---~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+++++|+.+ ++.+++.... .+....+..++.|++.++.|+|
T Consensus 70 -------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 70 -------------------------------EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 2237999999975 7776666654 7999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~ 587 (1170)
+.+++|||+||+||+++..+ .++++|||+++........... .......+||+.|+|||.+.+. ..+.
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~~t~~~~~pe~~~~~~~~~~~ 189 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI---------PALPSTSVGTPGYMAPEVLLGLSLAYAS 189 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccc---------cccccccccccccCCHHHhcCCCCCCCC
Confidence 99999999999999999988 7999999999854322110000 0123567899999999999874 4688
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCC--CCCccccC-----CHHHHHHHHHccCCCCCCCCCH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGE--LPPSWVAK-----FSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~--~p~~~~~~-----~~e~~~LI~~~L~~dP~~RPta 654 (1170)
...|+||+|++++++++ ||..... .......+..... ........ ...+.+++.+|+..+|..|.+.
T Consensus 190 ~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 269 (384)
T COG0515 190 SSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269 (384)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCH
Confidence 99999999999999885 6554442 2222222222221 11111111 1467899999999999999999
Q ss_pred HHHHhcc
Q 001059 655 TELLQDA 661 (1170)
Q Consensus 655 ~eiL~~~ 661 (1170)
.+...+.
T Consensus 270 ~~~~~~~ 276 (384)
T COG0515 270 SSDLSHD 276 (384)
T ss_pred HHHhhch
Confidence 9988773
No 442
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.86 E-value=1.3e-20 Score=225.76 Aligned_cols=354 Identities=15% Similarity=0.163 Sum_probs=249.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
....|+..|+|..+.+++.+++.++.....+||++|.||.+ ..+++++.+.+.||.+... ++.++|||--++.
T Consensus 207 ~~~~G~~~~~pkG~~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~~y~e~mf~~~~~-~~~~~lKpmNCpg 285 (589)
T COG0441 207 EEGPGLPFWHPKGATIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWDNYKEDMFLTESD-DREYALKPMNCPG 285 (589)
T ss_pred ccCCcceEECCCcccHHHHHHHHHHHHHHhcCceEecCCeeeecccchhccchhhccccceeeccC-ChhheeeeccCHh
Confidence 45689999999999999999999999999999999999999 3345567789999977554 4999999955554
Q ss_pred HHHHHHh----CCCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcc
Q 001059 787 FIRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 787 iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~ 855 (1170)
-+.++.+ ++..|+|++..|.|||+|..+ .|.|.|+|-+++||+..+...| .+++.++..+++.+|+++
T Consensus 286 h~~ifk~~~~SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdDaHifc~~dQi~~E~~~~~~~i~~v~~~fg~~~- 364 (589)
T COG0441 286 HILIFKSGLRSYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDAHIFCTPDQIKDEFKGILELILEVYKDFGFTD- 364 (589)
T ss_pred HHHHHhcCCcceeccchhhhhcceeecccCcchhhccccccceeecccceeccHHHHHHHHHHHHHHHHHHHHhcCCce-
Confidence 4455544 334699999999999999765 2556699999999999776544 489999999999999984
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++.+. +.+|.++.|-.+...+...++. .++.-...+.-. .+.|+
T Consensus 365 y~~~ls~r~------k~ig~d~~W~~a~~~l~~al~~----------------------~~~~~~~~~G~~----aFyGP 412 (589)
T COG0441 365 YEVKLSTRP------KFIGSDEMWDKAEAALREALKE----------------------IGVEYVEEPGEG----AFYGP 412 (589)
T ss_pred EEEEEecCC------cccCChhhhHHHHHHHHHHHHh----------------------hCceeeecCCce----EEECc
Confidence 999999876 4456665554433222222211 111000000000 11121
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
++.|-+...-|-..-.|+|.--|.. .-|+|
T Consensus 413 ----------------------------------Kid~~v~Dalgr~~q~~TIQlDf~l----------------peRF~ 442 (589)
T COG0441 413 ----------------------------------KIDFQVKDALGREWQLGTIQLDFNL----------------PERFD 442 (589)
T ss_pred ----------------------------------ccceEEEeccCcceecceEEEecCC----------------hhhce
Confidence 1211111111222334444322211 11222
Q ss_pred hhhhhcccccccccCC-CCCCCCceEEecc--HHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1016 YLLHRMWDREYVGYAS-RTNPPSGVGASLA--LETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g-~~~~~pAvGfaig--lerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
-.- ++.-| .++|+ -+..|+. +||.+.+|.+ +..+. -.+|.+|.|++++ ++...+|.++++.|+
T Consensus 443 -------l~Y-v~~d~~~~~Pv-miHrai~GSiERfi~iLiE~~~G~~P~-WLaPvQv~VipV~-~~~~~ya~~v~~~L~ 511 (589)
T COG0441 443 -------LEY-VDEDGEKKRPV-IIHRAILGSIERFIGILLEHYAGALPT-WLAPVQVRVIPVA-DEHLDYAKEVAEKLR 511 (589)
T ss_pred -------EEE-EcCCCCccCCE-EEEeccchhHHHHHHHHHHhccCCCcc-cCCccEEEEEEeC-hHHHHHHHHHHHHHH
Confidence 100 11111 12222 4445544 8999888753 32332 3578999999997 677899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+.|++|+++.. +.+++++++.|....+|+++++|++|.++++|++|...++++..+++++++..++...++.
T Consensus 512 ~~giRvdvD~~-~e~l~kKIR~a~~~kipyiiVvG~kE~e~~~v~vR~r~~~~~~~~~l~e~i~~ik~e~~~~ 583 (589)
T COG0441 512 KAGIRVDIDDR-NEKLGKKIREAGTQKIPYVIVVGDKEVETGTVVVRRRGGKQQKSMTLEELVEELKKEIEGR 583 (589)
T ss_pred HcCCeeeeccc-ccchHHHHHHHHhcCCCEEEEEchhhhccCceEEEEccCCccccccHHHHHHHHHHHhhcc
Confidence 99999998887 7799999999999999999999999999999999999999999999999999998887643
No 443
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.7e-22 Score=247.95 Aligned_cols=261 Identities=24% Similarity=0.346 Sum_probs=190.8
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~---~~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.....+|.|++|.|+.+......+.++.|....+ ..+.. ....+..|+-+-+.+.|||++.....+.+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~-------- 392 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE-------- 392 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh--------
Confidence 3457899999999988888877777777765432 11211 22236678888888999999765433321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+-.||||+++|...+.....++..++..++.|++.|++|||+.|
T Consensus 393 --------------------------------~~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G 440 (601)
T KOG0590|consen 393 --------------------------------IDGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG 440 (601)
T ss_pred --------------------------------cccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC
Confidence 111223399999999999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|.||||||+|+++..+|.+||+|||.+.....+. ........+.+|+..|+|||++.+...-....|||
T Consensus 441 iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~-----------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiw 509 (601)
T KOG0590|consen 441 LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW-----------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVW 509 (601)
T ss_pred ceeccCccccEEEecCCceEEeecCcceeeccCc-----------chhhhhhcCcccCCcCcCcccccccccCcchhhhh
Confidence 9999999999999999999999999998653221 11123345679999999999999854445679999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC------CCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG------ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~------~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|.||+++.|.+ ||................. .....+...+.+.+.+|.+||+.||.+|.|+++|++++|++
T Consensus 510 S~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~ 589 (601)
T KOG0590|consen 510 SCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR 589 (601)
T ss_pred hccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence 99999999986 6654332221100000000 01112233344678999999999999999999999999998
Q ss_pred CchHH
Q 001059 665 QMEYE 669 (1170)
Q Consensus 665 ~~~~~ 669 (1170)
.....
T Consensus 590 ~i~~c 594 (601)
T KOG0590|consen 590 SIECC 594 (601)
T ss_pred hcceE
Confidence 87543
No 444
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=6.4e-20 Score=211.64 Aligned_cols=256 Identities=22% Similarity=0.275 Sum_probs=184.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCChhhHHHHHHHHHHHHhccC----CCceeEEEEEeecCccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQH----QHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H----pnIV~l~~~~~e~~~~~ 430 (1170)
.|.+.+.||+|+||.||+|.+..++ ..+|+|.......... ..+..|..++..+.+ +++..+++...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR------ 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEecc------
Confidence 8999999999999999999998664 6789998765433211 157788999988873 57777775431
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+-||||+.++.+|.++.... +.|+...+..++.|++.+|++
T Consensus 91 ---------------------------------~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~ 137 (322)
T KOG1164|consen 91 ---------------------------------STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALED 137 (322)
T ss_pred ---------------------------------CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHH
Confidence 124567999999999999988544 579999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC-----CCEEEeecCcchhccccccccCCCCCCCCCCcccc-CcccccCccCCCcccccC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR-----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~-----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l~~ 582 (1170)
||+.|++||||||+|+++... ..+.|.|||+|+............. .... .....||..|+++.+..+
T Consensus 138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~------~~r~~~~~~rGT~ry~S~~~H~~ 211 (322)
T KOG1164|consen 138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLR------PPRPQKGLFRGTLRYASINVHLG 211 (322)
T ss_pred HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccc------cCCCCccCCCCccccccHHHhCC
Confidence 999999999999999999865 4699999999994321110000000 0001 134569999999999998
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHH---HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
...+.+.|+||++.++.||+. ||...... ........ ...........+.++.++...+-..+...+|....
T Consensus 212 -~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~ 289 (322)
T KOG1164|consen 212 -IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR-KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEK 289 (322)
T ss_pred -CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh-hhccccccCCChHHHHHHHHHhhccCCcCCCCHHH
Confidence 568999999999999999985 77543321 11111111 11111112223356777777777789999998888
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+...
T Consensus 290 ~~~~ 293 (322)
T KOG1164|consen 290 LAEL 293 (322)
T ss_pred HHHH
Confidence 7653
No 445
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=2.6e-20 Score=193.88 Aligned_cols=258 Identities=21% Similarity=0.248 Sum_probs=190.7
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC-CCceeEEEEEeec
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFET 426 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H-pnIV~l~~~~~e~ 426 (1170)
++.-.....|.++++||.|+||.+|+|.+..+|..||||+-+.+.. ..++..|..+.+.|+| ..|..+..+.
T Consensus 8 ~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~--- 80 (341)
T KOG1163|consen 8 LEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYG--- 80 (341)
T ss_pred hhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhc---
Confidence 3344556899999999999999999999999999999998653322 2457789999999976 4455444332
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~g 505 (1170)
.+..+-.+||++.+.+|.+++.-+ ..|+..+++-++-|++.-
T Consensus 81 -------------------------------------~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~R 123 (341)
T KOG1163|consen 81 -------------------------------------TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSR 123 (341)
T ss_pred -------------------------------------cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHH
Confidence 134566899999999999998754 459999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
++|+|.+++|||||||+|+|..-+ ..+.|+|||+|+.+.......... ....+...||.+|++--+..+
T Consensus 124 iEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIp--------yre~r~ltGTaRYASinAh~g 195 (341)
T KOG1163|consen 124 IEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIP--------YREDRNLTGTARYASINAHLG 195 (341)
T ss_pred HHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCc--------cccCCccceeeeehhhhhhhh
Confidence 999999999999999999999654 458899999999876543322222 123456789999999988877
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
-..+...|+-|+|.+|..+.. ||.+... .+..-++...+-..|. -....+.++...+.-|-..-=.+-|..
T Consensus 196 -~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 196 -IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred -hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 456889999999988877763 8875533 2223333333333332 233455578888888877766677765
Q ss_pred HHHH
Q 001059 655 TELL 658 (1170)
Q Consensus 655 ~eiL 658 (1170)
.-+-
T Consensus 275 ~ylr 278 (341)
T KOG1163|consen 275 MYLR 278 (341)
T ss_pred HHHH
Confidence 5443
No 446
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=4e-22 Score=233.40 Aligned_cols=241 Identities=28% Similarity=0.411 Sum_probs=196.9
Q ss_pred eeccCCcEEEEEEEE---ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCCCC
Q 001059 362 PLGHGGFGHVVLCKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~---~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
++|.|+||.|++++. ...|..||+|+.+..............|-.++..++ ||.+|+++.+|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq------------- 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ------------- 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec-------------
Confidence 379999999997764 345788999998765433333334556777888886 999999997772
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
....++++++|.. |.|...+.....+++.....+...++.+++++|+.+|+|
T Consensus 68 ---------------------------t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiy 120 (612)
T KOG0603|consen 68 ---------------------------TDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAY 120 (612)
T ss_pred ---------------------------cccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 3456789999985 588888888888999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
||+|++||+++.+|++++.|||+++..-.. +..|||..|||||++.+ ...++|+||||
T Consensus 121 rd~k~enilld~~Ghi~~tdfglske~v~~-------------------~~~cgt~eymApEI~~g---h~~a~D~ws~g 178 (612)
T KOG0603|consen 121 RDYKLENVLLLLEGHIKLTDFGLSKEAVKE-------------------KIACGTYEYRAPEIING---HLSAADWWSFG 178 (612)
T ss_pred hcccccceeecccCccccCCchhhhHhHhh-------------------hhcccchhhhhhHhhhc---cCCcccchhhh
Confidence 999999999999999999999999875322 22389999999999985 58899999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 668 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 668 (1170)
++++||++ ||.. +....+++.+...|.. .++.+++++..++..+|..|.. +.++++|+++.+..+
T Consensus 179 vl~felltg~~pf~~----~~~~~Il~~~~~~p~~---l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 179 VLAFELLTGTLPFGG----DTMKRILKAELEMPRE---LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred hhHHHHhhCCCCCch----HHHHHHhhhccCCchh---hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 99999997 8877 4444555545555543 4568999999999999999974 578999999999987
Q ss_pred HHH
Q 001059 669 ELL 671 (1170)
Q Consensus 669 ~~~ 671 (1170)
.-+
T Consensus 252 ~~l 254 (612)
T KOG0603|consen 252 NEL 254 (612)
T ss_pred hhH
Confidence 744
No 447
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=7e-21 Score=231.39 Aligned_cols=272 Identities=21% Similarity=0.281 Sum_probs=195.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+|...+.||++.|=+|.+|++. .|. |+||++-+.. .+.+...+.++|++ .+.++|||.+++.-.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~---------- 90 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL---------- 90 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH----------
Confidence 6778899999999999999987 344 9999986554 23334445556666 6667999999875221
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......|+|-+|.-.+|++.+..+.-+..-+.+.|+.||+.||..+|..|
T Consensus 91 ------------------------------~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g 140 (1431)
T KOG1240|consen 91 ------------------------------VTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG 140 (1431)
T ss_pred ------------------------------HhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 23456689999999999999998888888899999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc-CcccccCccCCCcccccCC---------
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQGW--------- 583 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l~~~--------- 583 (1170)
|+|+|||.+||||+.-+.+.|+||..-+....+. .+++++.+- .|+. .-.+|.|||.+...
T Consensus 141 VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe--------DNPadf~fFFDTSr-RRtCYiAPERFv~~~~~~~~~q~ 211 (1431)
T KOG1240|consen 141 VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE--------DNPADFTFFFDTSR-RRTCYIAPERFVSALGKTSVGQD 211 (1431)
T ss_pred ccccccccceEEEeeechhhhhcccccCCccCCC--------CCcccceEEEecCC-ceeeecChHhhhccccccccCCc
Confidence 9999999999999999999999998765322111 112233221 2222 33469999976431
Q ss_pred -CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcccc--CCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 584 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA--KFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 584 -~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~--~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+..+++.||||+||++.||++ |......- ..-.......+..... ....++++|..|++.||++|.+|++.
T Consensus 212 ~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL---~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedy 288 (1431)
T KOG1240|consen 212 APLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL---LAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDY 288 (1431)
T ss_pred ccccChhhhhhhhhHHHHHHHhcCCCcccHHHH---HhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHH
Confidence 125789999999999999996 33222221 1111111111110000 01267899999999999999999999
Q ss_pred Hhc---cCCCCchHHHHHHHHHhcCCCC
Q 001059 658 LQD---ALPPQMEYELLDNILRMMHSSE 682 (1170)
Q Consensus 658 L~~---~~~~~~~~~~~~~~~~~~~~~~ 682 (1170)
|+. .+|+...+.++..++..+-+..
T Consensus 289 L~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 289 LQKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred HHhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 987 4788888888888877665443
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.82 E-value=1.4e-20 Score=229.20 Aligned_cols=237 Identities=24% Similarity=0.379 Sum_probs=175.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-.+|+.++.|-.|+||-||.++|+.+.+.+|+| ++..+. +.|- +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee----------------
Confidence 369999999999999999999999999999994 432211 1111 11111222222
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
|+-...+...+.++.. ++.+++|||+.|
T Consensus 136 --------------------------------------------gDc~tllk~~g~lPvd--------mvla~Eylh~yg 163 (1205)
T KOG0606|consen 136 --------------------------------------------GDCATLLKNIGPLPVD--------MVLAVEYLHSYG 163 (1205)
T ss_pred --------------------------------------------chhhhhcccCCCCcch--------hhHHhHhhccCC
Confidence 2333333333334332 288999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|||+||+|.+|+.-|++|+.|||+++............-........+.....+|||.|.|||++.. +.|+..+|||
T Consensus 164 ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdww 242 (1205)
T KOG0606|consen 164 IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWW 242 (1205)
T ss_pred eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHH
Confidence 999999999999999999999999999864322211110000001111223455699999999999887 4699999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~ 667 (1170)
++|+|+||++- ||.+..+++.+-..+......|..-....++++++|.++|..+|..|. .+-++.+|.||..+.
T Consensus 243 amGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 243 AMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred HHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 99999999984 999998888887777777778877777788999999999999999995 678889999999998
Q ss_pred HH
Q 001059 668 YE 669 (1170)
Q Consensus 668 ~~ 669 (1170)
|.
T Consensus 323 w~ 324 (1205)
T KOG0606|consen 323 WK 324 (1205)
T ss_pred cc
Confidence 76
No 449
>cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain. This domain is the core catalytic domain of tRNA synthetases of the subgroup containing glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. These enzymes belong to class II aminoacyl-tRNA synthetases (aaRS) based upon their structure and the presence of three characteristic sequence motifs in the core domain. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ and the accessory subunit of mitochondrial polymerase gamma (Pol gamma b) . Most class II tRNA synthetases are dimers, with this subgroup consisting of mostly homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA.
Probab=99.82 E-value=4.9e-20 Score=202.89 Aligned_cols=138 Identities=9% Similarity=0.135 Sum_probs=120.2
Q ss_pred hhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccC----CceeeecCCCCHHHHHHHHhC-
Q 001059 726 TELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHG----GDLLELSHELRLPFIRWAISN- 794 (1170)
Q Consensus 726 ~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~----G~~laLRPD~T~~iaR~~~~~- 794 (1170)
+.+++.|++.+++.|.++||++|.||+| .+.. +++...++||+|.|.+ |+.++||||.|+|++|+++.+
T Consensus 2 ~~~~~~l~~~~~~~~~~~G~~ei~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LrP~~~~~i~~~~~~~~ 81 (235)
T cd00670 2 TALWRALERFLDDRMAEYGYQEILFPFLAPTVLFFKGGHLDGYRKEMYTFEDKGRELRDTDLVLRPAACEPIYQIFSGEI 81 (235)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEECCeEcCHHHHhhcCCcccchhhcCeeccCcccccCCeEEEecCCCHHHHHHHhccC
Confidence 5678899999999999999999999999 2222 2577789999999998 899999999999999998874
Q ss_pred ---CCCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCC--CcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHH
Q 001059 795 ---QKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 865 (1170)
Q Consensus 795 ---~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~--~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i 865 (1170)
...|+|+||+|+|||+|.++ .|.+||+|+|+|+||.+ +..+++|++.++.++++.||+. +++.+++.+.
T Consensus 82 ~~~~~lP~r~~~~g~~fR~E~~~~~gl~R~reF~q~e~~~~~~~~~~~~~~~e~~~~~~~~l~~lgl~--~~i~~~~~~~ 159 (235)
T cd00670 82 LSYRALPLRLDQIGPCFRHEPSGRRGLMRVREFRQVEYVVFGEPEEAEEERREWLELAEEIARELGLP--VRVVVADDPF 159 (235)
T ss_pred ccchhcCeeeeeecccccCCCCCCCCChhheeeeeceEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEEEccChh
Confidence 24699999999999998766 24567999999999998 6789999999999999999984 9999998543
No 450
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.82 E-value=3.8e-20 Score=204.07 Aligned_cols=281 Identities=23% Similarity=0.277 Sum_probs=185.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCc-----------------------------------EEEEEEEecCC---
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGR-----------------------------------HYAVKKIRLKD--- 392 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~-----------------------------------~vAVK~i~~~~--- 392 (1170)
.-.+++|++...||+|....||.|+...+|. +.|||.+-.-+
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 3447899999999999999999998764321 24566542111
Q ss_pred CChhhHHHHHHHHH------HH--------Hh--------ccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccc
Q 001059 393 KSLPVNDRILREVA------TL--------SR--------LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNR 450 (1170)
Q Consensus 393 ~~~~~~~~~~~Ev~------iL--------~~--------l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~ 450 (1170)
.+....+.+.+|.- .+ +. -.|||||++.++|.+.... +-.+.+.+.....
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~-------lPda~~~YPdalp- 304 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKV-------LPDAIERYPDALP- 304 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhcc-------CCchhhhCccccc-
Confidence 12222333333321 11 11 2699999999998764311 1111111111111
Q ss_pred cccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeec--C
Q 001059 451 AASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD--A 528 (1170)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~--~ 528 (1170)
. .+ ..........+|+||.-.+.+|.+++-.+. .+.....-++.|+++|+.|||.+||.|||||++|||+. +
T Consensus 305 ~----R~-~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eldd 378 (598)
T KOG4158|consen 305 A----RW-YPSGAGEPKTLYLVMKRYRQTLREYLWTRH-RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDD 378 (598)
T ss_pred c----ee-cccccCCCceEEEehhcchhhHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecC
Confidence 0 00 112233567899999999999999987654 55667778899999999999999999999999999994 3
Q ss_pred CC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-----CCccchhHHHHHHHHH
Q 001059 529 RN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFFE 601 (1170)
Q Consensus 529 ~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-----~~~ksDIwSlGviL~E 601 (1170)
|+ .+.|+|||.+---.... .+ .|. .......-|...-||||+....+. .-.|+|.|+.|.+.||
T Consensus 379 D~~P~LVvaDFGCcLAd~~hG-lq---lpy-----~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYE 449 (598)
T KOG4158|consen 379 DEIPQLVVADFGCCLADDNHG-LQ---LPY-----ESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYE 449 (598)
T ss_pred CCCcEEEEcccceeeeccccc-cc---ccc-----ccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHH
Confidence 33 48899999875322111 11 111 111233468888999998765332 2358999999999999
Q ss_pred hhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 602 LWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 602 Llt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
++. ||+...++...... .+..++|.-...++|.+++++..+|+.||++|+++.
T Consensus 450 Ifg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 450 IFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred HhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 996 99874433222222 224556777778889999999999999999999854
No 451
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=7.3e-20 Score=194.82 Aligned_cols=140 Identities=14% Similarity=0.119 Sum_probs=108.0
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhh------------------------HHHHHHHHHHHHhccCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV------------------------NDRILREVATLSRLQHQH 415 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~------------------------~~~~~~Ev~iL~~l~Hpn 415 (1170)
...||+|+||.||+|.+. +|+.||||+++....+... .....+|+..|..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999997 8999999999754321111 112345999999998887
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHH
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKEL 494 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~ 494 (1170)
+....... ....+|||||++| ++.........++...
T Consensus 81 v~~p~~~~------------------------------------------~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~ 118 (190)
T cd05147 81 IPCPEPIL------------------------------------------LKSHVLVMEFIGDDGWAAPRLKDAPLSESK 118 (190)
T ss_pred CCCCcEEE------------------------------------------ecCCEEEEEEeCCCCCcchhhhcCCCCHHH
Confidence 64322110 0112799999986 4444434456799999
Q ss_pred HHHHHHHHHHHHHHH-HhCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 495 AWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yL-Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
+..++.|++.+|.|+ |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 119 ~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 119 ARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 999999999999999 799999999999999998 578999999999754
No 452
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=5.3e-19 Score=188.34 Aligned_cols=141 Identities=23% Similarity=0.205 Sum_probs=110.4
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------------------------hHHHHHHHHHHHHhccCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------------------VNDRILREVATLSRLQHQH 415 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------------------------~~~~~~~Ev~iL~~l~Hpn 415 (1170)
.+.||+|+||+||+|.+. +|+.||||+++....... ....+.+|+..+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999988 999999999986432110 0123457999999999998
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCc-HHHHHHhcCCCCHHH
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKEL 494 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~e~~ 494 (1170)
|.....++. ...|+||||++|. +.........++...
T Consensus 81 i~~p~~~~~------------------------------------------~~~~lVmE~~~g~~~~~~~l~~~~~~~~~ 118 (190)
T cd05145 81 VPVPEPILL------------------------------------------KKNVLVMEFIGDDGSPAPRLKDVPLEEEE 118 (190)
T ss_pred CCCceEEEe------------------------------------------cCCEEEEEEecCCCchhhhhhhccCCHHH
Confidence 754332220 0137999999863 433323345688899
Q ss_pred HHHHHHHHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhcc
Q 001059 495 AWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 544 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~ 544 (1170)
+..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|+...
T Consensus 119 ~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 119 AEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999999999 9999999999999998 8999999999998653
No 453
>cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain. ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.78 E-value=9.5e-19 Score=198.88 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=128.4
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|+.+|+|.++.+++.|++.+++++.++||++|.||.| .+. ++.+...++||++. .+|+.++|||+.|+++
T Consensus 18 ~~~G~~~~~p~g~~l~~~l~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sg~~~~~~~~my~~~-~~~~~l~LRP~~~~~~ 96 (298)
T cd00771 18 AGPGLPFWLPKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPFE-EEDEEYGLKPMNCPGH 96 (298)
T ss_pred CCCcceEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCeecCHHHHhhCCCccccccCceEec-cCCceEEEcccCCHHH
Confidence 5789999999999999999999999999999999999999 332 23456789999994 4678999999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCc-ccHH-HHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASA-LTEA-EVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~----~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~-~aDa-Evi~la~~~l~~lgi~~~~ 856 (1170)
+|+++.. ...|+|+||+|+|||+|.++ .|.+||+|+|+|+||.++. .+++ |+|.++.++++.||+.. +
T Consensus 97 ~~~~~~~~~s~~~LPlr~~~~g~vfR~E~~~~~~Gl~R~reF~q~e~~i~~~~e~~~~e~~e~l~~~~~~l~~lgl~~-~ 175 (298)
T cd00771 97 CLIFKSKPRSYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIFCTPDQIKEEIKGVLDLIKEVYSDFGFFD-Y 175 (298)
T ss_pred HHHHHhhccchhhCCeEEEEecCcccCCCCCCCCCccccccEEECCEEEEeCCcchHHHHHHHHHHHHHHHHHcCCCc-E
Confidence 9988863 34699999999999998775 3667899999999988755 3343 79999999999999985 9
Q ss_pred EEEeCcHH
Q 001059 857 DIHLNHGD 864 (1170)
Q Consensus 857 ~i~lg~~~ 864 (1170)
.|.++++.
T Consensus 176 ~i~l~~~~ 183 (298)
T cd00771 176 KVELSTRP 183 (298)
T ss_pred EEEEEcCh
Confidence 99999986
No 454
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=7.7e-19 Score=189.89 Aligned_cols=179 Identities=13% Similarity=0.155 Sum_probs=130.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHH------HHHHHHHHHhccCCCceeEEEEEeec
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDR------ILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~------~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
.++|++++.||.|+||.||++.. ++..+|||+++......+ .... +.+|+..+.++.||+|.....++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 46899999999999999999655 477899999975443222 1122 57899999999999999988776432
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
... ........+++|||++| +|.++.. +++ ....+|+.+
T Consensus 108 ~~~--------------------------------~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~ 147 (232)
T PRK10359 108 ERK--------------------------------TLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKAS 147 (232)
T ss_pred ccc--------------------------------cccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHH
Confidence 100 00113457899999987 7877632 333 245699999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|..||+.|++|||+||+||+++.++ ++|+|||.+....... ....++.. ..
T Consensus 148 l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~---------------------------a~d~~vle-r~ 198 (232)
T PRK10359 148 IESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK---------------------------AKDRIDLE-RH 198 (232)
T ss_pred HHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh---------------------------hHHHHHHH-hH
Confidence 9999999999999999999999888 9999999887532111 00012222 34
Q ss_pred CCccchhHHHHHHHHHhh
Q 001059 586 IDEKADMYSLGIVFFELW 603 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELl 603 (1170)
|+.++|+||||+++.-+.
T Consensus 199 y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 199 YGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hcccccccceeEeehHHH
Confidence 678999999999877653
No 455
>KOG4018 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown]
Probab=99.77 E-value=7.6e-20 Score=187.54 Aligned_cols=104 Identities=26% Similarity=0.356 Sum_probs=92.1
Q ss_pred CCCCCcc-EEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 2 GYEDLDV-SALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 2 ~~~~~~~-~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
++++++. ++.|.|++|++|||+||++++...+|+.+.++..+++.|+.+|++|| ||+|||||||++||||++++.++
T Consensus 42 ~e~d~~~~~~~l~~s~tEnYPDe~Pli~~~~~~~~~~~~i~~i~~~l~~~aeenL--GmaMiftLvss~ke~l~e~~~q~ 119 (215)
T KOG4018|consen 42 GENDEPKGSFILVFSLTENYPDEAPLIEAFENENLEDAEIEGILEKLQQEAEENL--GMAMIFTLVSSAKEELNEIVEQQ 119 (215)
T ss_pred ccCCCccccEEEEEEccCCCCCCCcceeccccccccHHHHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666 99999999999999999999999999999999999999999999999 99999999999999999999988
Q ss_pred CCCCCCCCccccccccccccchhhcccccccCCceE
Q 001059 81 QSNESVPGLVTESSSQSFEGSAVSASKSCSSKVPFV 116 (1170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1170)
..+ +....+..++++.|+..|||+|.-
T Consensus 120 ~~~---------e~~e~~~~~~ee~e~~kfhgt~VT 146 (215)
T KOG4018|consen 120 KAA---------EQREQEAREAEEEERKKFHGTPVT 146 (215)
T ss_pred HHH---------HHHHHHHHHHHHHhhccccCCcee
Confidence 765 333344556778889999999853
No 456
>cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from prokaryotes and from the mitochondria of eukaryotes.
Probab=99.77 E-value=2.4e-19 Score=199.24 Aligned_cols=158 Identities=11% Similarity=0.100 Sum_probs=133.8
Q ss_pred cccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceee
Q 001059 705 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLE 778 (1170)
Q Consensus 705 ~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~la 778 (1170)
.++... ..++|+.||+|.++.+++.|++.+++.|.++||++|.||+| .+.. +.+...++||+|.|.+|+.++
T Consensus 12 ~ag~~~--~~~~G~~~~lP~g~~l~~~i~~~~~~~~~~~G~~ei~~P~l~~~~~~~~sg~~~~~~~emy~~~d~~~~~l~ 89 (255)
T cd00779 12 RAGFIR--QTSSGLYSWLPLGLRVLKKIENIIREEMNKIGAQEILMPILQPAELWKESGRWDAYGPELLRLKDRHGKEFL 89 (255)
T ss_pred HcCCcc--cCCCceEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCccccCcccEEEecCCCCeEE
Confidence 344443 46899999999999999999999999999999999999999 3332 344678999999999999999
Q ss_pred ecCC----CCHHHHHHHHhCCCCceeEEEecCeEEcC-CCCCC---CCceeEeEEEEeCCCCcccHH---HHHHHHHHHH
Q 001059 779 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIV 847 (1170)
Q Consensus 779 LRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l 847 (1170)
|||+ +|..++|.+.+++..|+|+||+|+|||+| +|+.| .+||+|+|+++||.+...+|+ |++.++.+++
T Consensus 90 LrPt~e~~~t~~~~~~i~s~~~LPlr~~~~~~~FR~E~~~~~Gl~R~reF~q~e~~~~~~~~~~a~~~~~~i~~~~~~il 169 (255)
T cd00779 90 LGPTHEEVITDLVANEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDIDEESLEETYEKMYQAYSRIF 169 (255)
T ss_pred EecCCcHHHHHHHHhccccHhhCCHHHHhCcceecCCCCCCCceeeeeeEeHhhheeccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 56666666666667799999999999999 88764 557999999999998888898 8888999999
Q ss_pred HHcCCCcceEEEeCcHHHH
Q 001059 848 TRFFHAESCDIHLNHGDLL 866 (1170)
Q Consensus 848 ~~lgi~~~~~i~lg~~~il 866 (1170)
+.||++ +.+..++.+.+
T Consensus 170 ~~Lgl~--~~~~~~~~~~~ 186 (255)
T cd00779 170 KRLGLP--FVKVEADSGAI 186 (255)
T ss_pred HHcCCc--EEEEEecCCCC
Confidence 999994 77777776554
No 457
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=4.2e-18 Score=189.44 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=148.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccC---C-------CceeEEEEEe
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQH---Q-------HVVRYYQAWF 424 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~H---p-------nIV~l~~~~~ 424 (1170)
.+...+.||.|+++.||.+++..||+.+|+|++...... ....+++.+|.-....+.+ | .++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 456788999999999999999999999999998765532 2345667777655544322 1 1111111110
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH---hcCCC----CHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHF----DKELAWH 497 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~---~~~~l----~e~~~~~ 497 (1170)
-++ ... ++. .........-.+.+++|.-+.++|.+++. ..... .......
T Consensus 93 i~~------~~~---------~~~--------~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~ 149 (288)
T PF14531_consen 93 IPG------KPP---------FFE--------RGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLS 149 (288)
T ss_dssp ETT------S-S---------EEE--------ECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHH
T ss_pred EcC------CCc---------cee--------cCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHH
Confidence 000 000 000 00000000112557888888888887754 22222 1122345
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
+..|+++.+++||+.|++|+||||+|+|++.+|.+.|+||+......... .....+..|.||
T Consensus 150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------~~~~~~~~~~PP 211 (288)
T PF14531_consen 150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY------------------RCSEFPVAFTPP 211 (288)
T ss_dssp HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE------------------EGGGS-TTTS-H
T ss_pred HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCcee------------------eccCCCcccCCh
Confidence 55899999999999999999999999999999999999998877543211 002345789999
Q ss_pred ccccCC-------CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 578 EIEQGW-------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 578 E~l~~~-------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
|..... -.++.+.|.|+||+++|.|++ ||........... .+ ....+.+...+.||+.+|+.|
T Consensus 212 e~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f-~~C~~~Pe~v~~LI~~lL~~~ 284 (288)
T PF14531_consen 212 ELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DF-SRCRDMPEPVQFLIRGLLQRN 284 (288)
T ss_dssp HHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GG-TTSS---HHHHHHHHHHT-SS
T ss_pred hhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cc-hhcCCcCHHHHHHHHHHccCC
Confidence 976431 237889999999999999997 8764432211100 11 112245567899999999999
Q ss_pred CCCC
Q 001059 648 PSDR 651 (1170)
Q Consensus 648 P~~R 651 (1170)
|.+|
T Consensus 285 ~~~R 288 (288)
T PF14531_consen 285 PEDR 288 (288)
T ss_dssp GGGS
T ss_pred cccC
Confidence 9988
No 458
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=2.9e-17 Score=176.91 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=105.6
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-----cCCCceeEEEEEeecCccccCC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-----QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-----~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~------- 73 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD------- 73 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-------
Confidence 347899999999995 7777666 6999875432 2346789999999999 579999999987432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccE-EEEEeeccC---CcHHHHHHhcCCCCHHHHHHHHHHHHHHH-HH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCP---RTLRQVFESYDHFDKELAWHLFRQIVEGL-AH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~iVmEy~~---gsL~~~l~~~~~l~e~~~~~i~~qI~~gL-~y 508 (1170)
..... +.+||||++ ++|.+++.+. .+++. ..++.|++.++ +|
T Consensus 74 ------------------------------~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~y 120 (210)
T PRK10345 74 ------------------------------CGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRY 120 (210)
T ss_pred ------------------------------CCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHH
Confidence 01123 347899954 5999999663 56666 35678888887 99
Q ss_pred HHhCCccccCCCCCceeecC----CCCEEEeecCcc
Q 001059 509 IHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLA 540 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~----~~~vKL~DFGlA 540 (1170)
||+++|+||||||+|||++. ++.++|+||+-+
T Consensus 121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999974 347999994444
No 459
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.1e-16 Score=169.70 Aligned_cols=190 Identities=15% Similarity=0.127 Sum_probs=131.7
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh--hHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--VNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~--~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+...|++|+||+||.+.. .+..++.+.+.....-.. ....+.+|+++|++|+ |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~----------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD----------- 71 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----------
Confidence 3567899999999997766 588888887754332111 1125789999999995 58898887541
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..|++|+|+.| +|.+.+.. . ...++.|++.+|.++|++|
T Consensus 72 ---------------------------------~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~G 111 (218)
T PRK12274 72 ---------------------------------GRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCG 111 (218)
T ss_pred ---------------------------------CEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCc
Confidence 24899999976 66544321 1 2357789999999999999
Q ss_pred ccccCC-CCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcc--ccCcccccCccCCCcccccCCCCCC-cc
Q 001059 514 IIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS--VDGTGQVGTYFYTAPEIEQGWPKID-EK 589 (1170)
Q Consensus 514 IiHrDL-Kp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~-~k 589 (1170)
|+|||| ||+|||++.++.++|+|||+|........... .+ ...+.. ... -..+++.|++|+...-....+ ..
T Consensus 112 IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r-~L--~~rDl~~llk~-~~~y~~~~l~~~~~~~l~~~~~~~ 187 (218)
T PRK12274 112 VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR-LL--AREDLRHLLKH-KRMYCPAALTPVERRVLKRTSWIR 187 (218)
T ss_pred CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH-HH--HHHHHHHHHHH-HHhcCCCCCCHHHHhhhccchhHH
Confidence 999999 79999999999999999999985432110000 00 000000 001 124788999998543322223 67
Q ss_pred chhHHHHHHHHHhhc
Q 001059 590 ADMYSLGIVFFELWH 604 (1170)
Q Consensus 590 sDIwSlGviL~ELlt 604 (1170)
.++++.|+-+|.++|
T Consensus 188 ~~w~~~g~~~~~~~~ 202 (218)
T PRK12274 188 ELWFATGKPVYRFVT 202 (218)
T ss_pred HHHHHhcchHHHHHh
Confidence 899999999999998
No 460
>KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.70 E-value=3.6e-16 Score=175.34 Aligned_cols=353 Identities=15% Similarity=0.117 Sum_probs=234.6
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCH
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
+....|+-.++|..+++.+.+.+.|+.-|++.||+||.||.+ .-+++++.+.++||+|.- ..++.+|.|.-++
T Consensus 178 ~~lSPGS~FflP~G~~iyN~Lv~fir~ey~~rGf~EVitPniy~~~LWe~SGHwqnY~enmF~~e~-eke~~~LKPMNCP 256 (560)
T KOG1637|consen 178 HELSPGSCFFLPHGTRIYNTLVDFIRAEYRKRGFTEVITPNIYNKKLWETSGHWQNYSENMFKFEV-EKEEFALKPMNCP 256 (560)
T ss_pred ccCCCcceeeccCcchHHHHHHHHHHHHHHhcCCceecCcchhhhhhhhhccchhhhhhhceeeee-chhhhccCccCCC
Confidence 456789999999999999999999999999999999999999 555678899999999866 3467999997666
Q ss_pred HHHHHHHhC----CCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcc-cHH-HHHHHHHHHHHHcCCCc
Q 001059 786 PFIRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 786 ~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~-aDa-Evi~la~~~l~~lgi~~ 854 (1170)
.-.-+..+. +..|+|+.-+|.+.|+|..+ .|.|+|+|-+++||+..+.. .+. -++..+..++.-+|..
T Consensus 257 gHcLmf~~r~rS~reLPlR~aDFg~LHRnE~SGaLsGLTRvRrFqQDDaHIFCt~~Qi~~Eik~~l~fl~~vY~~fgf~- 335 (560)
T KOG1637|consen 257 GHCLMFAHRDRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTPDQVKEEIKGCLDFLDYVYGVFGFT- 335 (560)
T ss_pred ccccccccCCccHhhCCccccCcceeeeccccccccccceeeeecccCceEEecCccHHHHHHHHHHHHHHHHHhcccc-
Confidence 554444432 24599999999999998654 46678999999999998874 443 5677777777766764
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
+.+.|+.+.- +.+|.-+.|-++-..+-.. +.+.|-+-.....=.+ +.|
T Consensus 336 -f~l~lSTRPe-----~~lG~l~~Wd~AE~~L~~a----------------------l~e~g~pw~lN~GDGA----FYG 383 (560)
T KOG1637|consen 336 -FKLNLSTRPE-----KFLGDLETWDEAEFKLEEA----------------------LNESGEPWVLNPGDGA----FYG 383 (560)
T ss_pred -ceeEeccChH-----HhccCHHHHHHHHHHHHHH----------------------HHHhCCCceecCCCcc----ccc
Confidence 8999998642 2345444443322211111 1111110000000001 112
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
+..++ .+.+++. .......|++|+-+.-.++ ..... .-|-|
T Consensus 384 PKIDi------------~l~Dal~-----r~hQcaTIQLDFqLP~rFd--------L~y~~--------------~~g~~ 424 (560)
T KOG1637|consen 384 PKIDI------------TLDDALG-----RKHQCATIQLDFQLPIRFD--------LEYET--------------EDGDL 424 (560)
T ss_pred ceeee------------EhhhhcC-----cccceeeeeecccChhhcC--------ceeec--------------ccccc
Confidence 21000 0000000 0000112444443332111 10000 00000
Q ss_pred chhhhhcccccccccCCCCCCCCceEEec-c-HHHHHhhccCCC--CCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASL-A-LETIIQHYPVDF--KPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfai-g-lerL~~~L~~~~--~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
++++ -|.-|| | +||.+++|.++. .++.-..|.++.|++++ +....+|-++...|+.
T Consensus 425 ------------------erPV-mIHRAIlGSvERmiaiL~E~~~gkwPFWlSPRq~~vIpVs-e~~~~ya~~V~~ql~~ 484 (560)
T KOG1637|consen 425 ------------------ERPV-MIHRAILGSVERMIAILLESYGGKWPFWLSPRQAVVIPVS-EGPLDYATSVQKQLEE 484 (560)
T ss_pred ------------------cchh-hHHHHHhhhHHHHHHHHHHHhCCCCCeeeccceEEEEECC-CcchhHHHHHHHHHHh
Confidence 1111 223332 3 899999997433 33334678899999997 7788999999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEc---CCCcccccchHHHHHHHHHH
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHL---DVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l---~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
.|+-+++... +..+.+.++.|.-.++.++++||++|.+.++|.|+.+ +++.+..++++++.+.+.++
T Consensus 485 a~f~~Dld~t-~~tl~kkir~Aqla~yn~i~VVGdkE~~~~~vnVr~Rd~~~~~~~~~~tie~~~~~~~~l 554 (560)
T KOG1637|consen 485 AGFYVDLDPT-DSTLRKKIRNAQLAHYNFIFVVGDKEVETGRVNVRTRDNRDNKTESEMTIEELSDEFKEL 554 (560)
T ss_pred hhceeecCCc-cchHHHHHhhhhhcceeEEEEEchhhhhcCceeeeccccccccccceeeHHHHHHHHHHh
Confidence 9998998777 4789999999999999999999999999999999998 44456678888888877654
No 461
>TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type. This model describes a glycyl-tRNA synthetase distinct from the two alpha and two beta chains of the tetrameric E. coli glycyl-tRNA synthetase. This enzyme is a homodimeric class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes His, Ser, Pro, and this set of glycyl-tRNA synthetases.
Probab=99.70 E-value=2.1e-15 Score=180.32 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=99.4
Q ss_pred CCc-eEEeccHHHHHhhccC-CCC-------------CCCCCCCceEEEEEcCCC-ccHHHHHHHHHHHHHcCCeEEEee
Q 001059 1036 PSG-VGASLALETIIQHYPV-DFK-------------PVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVP 1099 (1170)
Q Consensus 1036 ~pA-vGfaiglerL~~~L~~-~~~-------------~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~LR~~Gi~v~~~~ 1099 (1170)
+|- +--|+|+|||+.+|.+ ... .+...+|.+|+|++.+.+ .....|.++++.||..|++|+++.
T Consensus 414 ~P~VIepS~GIdRIi~ALle~~~~e~~~~~~~r~vL~lp~~lAP~kV~VIpl~~~~el~~~A~eIa~~LR~~GI~VeiD~ 493 (551)
T TIGR00389 414 IPHVIEPSFGIDRIIYALLEHSYQEEVLDGEEREVLRLPPHLAPIKVAVLPLVNKEELKEIAKEIFQALRKTGIRIKYDD 493 (551)
T ss_pred cceEEEcccCHHHHHHHHHHhhCccccccccccceeccCCccCCceEEEEEecCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 454 4778999999866632 111 112237889999998622 267899999999999999999877
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 001059 1100 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1100 ~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
. . ++++++++|++.|+|++|+||++++++|+|+||++++++|..++++++.+.+.++
T Consensus 494 s-~-sIGKq~rrADeiGiPf~IIIG~~EledgtVTIRdRdT~eQ~~I~ldeL~~~L~e~ 550 (551)
T TIGR00389 494 S-G-TIGKRYRRADEIGTPFCVTIDFETLEDETVTIRERDSMKQVRVKIKELPSYIKKL 550 (551)
T ss_pred C-C-CHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEeeHHHHHHHHHhh
Confidence 5 4 4999999999999999999999999999999999999999999999998887654
No 462
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=7.3e-17 Score=177.63 Aligned_cols=143 Identities=20% Similarity=0.150 Sum_probs=110.9
Q ss_pred CceEEeeeccCCcEEEEEEE-EccCCcEEEEEEEecCCCCh----------------------hhHHHHHHHHHHHHhcc
Q 001059 356 DFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 412 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~-~~~tg~~vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~l~ 412 (1170)
.|.+.+.||+|+||.||+|. +..+|+.||||+++...... .....+.+|+..++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999 66789999999997543110 01123568999999997
Q ss_pred CCC--ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC
Q 001059 413 HQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH 489 (1170)
Q Consensus 413 Hpn--IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~ 489 (1170)
+.+ +.++++. ...|+||||++| +|.........
T Consensus 109 ~~~i~~p~~~~~--------------------------------------------~~~~lV~E~~~g~~L~~~~~~~~~ 144 (237)
T smart00090 109 EAGVPVPKPIAW--------------------------------------------RRNVLVMEFIGGDGLPAPRLKDVE 144 (237)
T ss_pred hcCCCCCeeeEe--------------------------------------------cCceEEEEEecCCcccccccccCC
Confidence 643 3333321 113799999987 55554434445
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~g-IiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
+....+..++.||+.+|++||++| |+||||||+||+++ ++.++|+|||.|+..
T Consensus 145 ~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 145 PEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 677778899999999999999999 99999999999999 889999999999854
No 463
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.67 E-value=2.2e-16 Score=186.00 Aligned_cols=234 Identities=26% Similarity=0.419 Sum_probs=167.7
Q ss_pred HHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh
Q 001059 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES 486 (1170)
Q Consensus 408 L~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~ 486 (1170)
|+.+.|.|+.+++|.++. ...+++|.+||. |+|.+.+..
T Consensus 1 l~~l~h~n~~~f~g~~~~----------------------------------------~~~~~~i~~~c~rGsl~D~i~~ 40 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD----------------------------------------GPEMIVIWEYCSRGSLLDILSN 40 (484)
T ss_pred CcccchhhhhhheeeEec----------------------------------------CCceEEEEeeecCccHHhHHhc
Confidence 467899999999998853 356789999997 799999876
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 001059 487 -YDHFDKELAWHLFRQIVEGLAHIHGQGI-IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564 (1170)
Q Consensus 487 -~~~l~e~~~~~i~~qI~~gL~yLHs~gI-iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1170)
...++.-....++++|+.||+|||...| .|+.|++.|++++....+||+|||+........ . ...
T Consensus 41 ~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-~------------~~~ 107 (484)
T KOG1023|consen 41 EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-E------------PEA 107 (484)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccc-c------------ccc
Confidence 4468888888999999999999998766 999999999999999999999999998753200 0 001
Q ss_pred CcccccCccCCCcccccCCC------CCCccchhHHHHHHHHHhhc---CCCch----hHHHHHHHHhh-h-cCCCCCcc
Q 001059 565 GTGQVGTYFYTAPEIEQGWP------KIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLK-Q-KGELPPSW 629 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~------~~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~l~-~-~~~~p~~~ 629 (1170)
.....-...|.|||.+.+.. ..+.++||||||++++|+++ ||... ...++...... . ....|..+
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~ 187 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIE 187 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchh
Confidence 11223456799999987631 14678999999999999996 77642 22233333222 1 11223222
Q ss_pred c--cCCHHHHHHHHHccCCCCCCCCCHHHHHhcc--CCCC--chHHHHHHHHHhcCCCCCccchhhhhcccccchhh
Q 001059 630 V--AKFSEQESLLRRLMSPSPSDRPSATELLQDA--LPPQ--MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETL 700 (1170)
Q Consensus 630 ~--~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~--~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 700 (1170)
. ...+++..+++.||..+|.+||+++++-... .... ....+++.+++++ +.|..+++..+++.+.
T Consensus 188 ~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~l------e~Y~~nLe~~v~eRt~ 258 (484)
T KOG1023|consen 188 LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRML------ESYADNLEKLVDERTA 258 (484)
T ss_pred hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHH------HHHHhhhHHHHHHHHH
Confidence 1 3445688999999999999999999986532 2222 2236677777766 4466666666666443
No 464
>cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain.
Probab=99.66 E-value=5.6e-16 Score=172.93 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=126.9
Q ss_pred ccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcc---cccceEEEeccCC----
Q 001059 706 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQ---FKRNTVKLLTHGG---- 774 (1170)
Q Consensus 706 ~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~---~~~~my~f~D~~G---- 774 (1170)
++.++. ..++|+.+|+|.++.+++.|++.+++.++++||++|.||.| .+.+.|.. ..++||.+.|.+|
T Consensus 13 ag~~~~-~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~g~~~~~~~~e~~~~~~~~~~~~~ 91 (264)
T cd00772 13 AELADQ-GPGRGIINFLPLAKAILDKIENVLDKMFKEHGAQNALFPFFILASFLEKEAEHDEGFSKELAVFKDAGDEELE 91 (264)
T ss_pred cCCccc-cCCCCEEEECCcHHHHHHHHHHHHHHHHHHcCCeEEECCeeccHHHHhhcCCcccccCccceEEEeCCCCccC
Confidence 444443 34889999999999999999999999999999999999999 33322332 3478999999887
Q ss_pred ceeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHHH---
Q 001059 775 DLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKVT--- 843 (1170)
Q Consensus 775 ~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~la--- 843 (1170)
+.++|||+.|++++++++.. +..|+|+||+|+|||+| +++. |.+||+|.++++|+.....++.|+..+.
T Consensus 92 ~~l~LrPt~e~~~~~~~~~~i~s~~~LPlrl~~~~~~fR~E~r~~~Gl~R~reF~~~e~~~~~~~~e~a~~e~~~~~~~~ 171 (264)
T cd00772 92 EDFALRPTLEENIGEIAAKFIKSWKDLPQHLNQIGNKFRDEIRPRFGFLRAREFIMKDGHSAHADAEEADEEFLNMLSAY 171 (264)
T ss_pred ceEEECCCCCHHHHHHHHhhhhhhhccCeeEEEEeCeEeCcCCCCCCcceeeEEEEeeeEEecCCHHHHHHHHHHHHHHH
Confidence 89999999999999988763 35699999999999998 7754 4567999999999988778888776555
Q ss_pred HHHHHHcC-CCcceEEEeCcH
Q 001059 844 MDIVTRFF-HAESCDIHLNHG 863 (1170)
Q Consensus 844 ~~~l~~lg-i~~~~~i~lg~~ 863 (1170)
.++++.|| +. +.+.....
T Consensus 172 ~~i~~~l~~lp--~~~~~~~~ 190 (264)
T cd00772 172 AEIARDLAAID--FIEGEADE 190 (264)
T ss_pred HHHHHhcCCcc--EEEEEcCC
Confidence 99999999 64 66666553
No 465
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=2.5e-15 Score=162.21 Aligned_cols=135 Identities=27% Similarity=0.342 Sum_probs=107.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.||+|++|.||+|.+ +|..+++|+......... ....+.+|+.++..+.|++|+....++..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------- 70 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------- 70 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe---------
Confidence 5799999999999988 588899998654322111 12457889999999999988755444321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+++|||++| +|.+++..... ....++.+++.+|.++|+.|
T Consensus 71 -------------------------------~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 71 -------------------------------PENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred -------------------------------CCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC
Confidence 2345899999976 88888765332 77889999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
++|||++|.|||++ ++.++|+|||++..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999999 78999999999874
No 466
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.62 E-value=1.8e-15 Score=162.28 Aligned_cols=136 Identities=26% Similarity=0.226 Sum_probs=104.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh--------------------hHHHHHHHHHHHHhccCCCc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--------------------VNDRILREVATLSRLQHQHV 416 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~--------------------~~~~~~~Ev~iL~~l~HpnI 416 (1170)
|.+.+.||.|+||.||+|.+. +|+.||||+++....... ......+|+.++..+.|+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 566788999999999999886 899999999875431110 11236778999999988753
Q ss_pred --eeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHH
Q 001059 417 --VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 493 (1170)
Q Consensus 417 --V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~ 493 (1170)
+..++ ....+++|||++| +|..... ..
T Consensus 96 ~v~~~~~--------------------------------------------~~~~~lv~e~~~g~~L~~~~~------~~ 125 (198)
T cd05144 96 PVPKPID--------------------------------------------WNRHAVVMEYIDGVELYRVRV------LE 125 (198)
T ss_pred CCCceee--------------------------------------------cCCceEEEEEeCCcchhhccc------cc
Confidence 22221 1123899999986 6655432 13
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
....++.+|+.++.++|+.||+||||||+||+++.++.++|+|||++...
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 45678899999999999999999999999999999999999999999754
No 467
>cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP binding and hydrolysis. This alignment contains only sequences from the GlyRS form which homodimerizes. The heterotetramer glyQ is in a different family of class II aaRS. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the N-terminus of the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). Pol gamma b stimulates processive DNA synthesis and is functional as a homodimer, which can associate with the catalytic subunit Pol gamma alpha to form a heterotrimer. Despite significant both structural and sequence similarity with Gly
Probab=99.61 E-value=1.6e-15 Score=168.58 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=114.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcC--CccccccceeccCCCcccccceEEEe----ccCCceeeecCCCC--
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHC--AKHLEIEPMYLLGDCPQFKRNTVKLL----THGGDLLELSHELR-- 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~G--y~~I~tP~~~~~~~~~~~~~~my~f~----D~~G~~laLRPD~T-- 784 (1170)
..++|+.||+|.++.+++.|++.+++.|.++| |++|.||++... +||++. |.+++.++||||.|
T Consensus 19 ~~~~G~~d~~P~g~~l~~~i~~~~~~~~~~~g~~~~~i~tP~i~~~--------~mf~~~~g~~d~~~~~~~Lrp~~~~~ 90 (254)
T cd00774 19 GGVAGFYDYGPLGVELKNNIKSAWRKSFVLEEEDMLEIDSPIITPE--------LMFKTSIGPVESGGNLGYLRPETAQG 90 (254)
T ss_pred cChhcccccCchHHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCH--------HHheeeecccCCCCcccccCCcccch
Confidence 35789999999999999999999999999996 999999998433 677775 45678999999999
Q ss_pred --HHHHHHHHhCC-CCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCc
Q 001059 785 --LPFIRWAISNQ-KSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 785 --~~iaR~~~~~~-~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~ 854 (1170)
++++|.+.++. ..|+|+||+|+|||+|.++ .|.|||+|+|+|+||.++...+ ..++.+..+++.++|+..
T Consensus 91 ~~~~~~~~~~~~~~~lP~~~~qig~~fR~E~~~~~gl~R~ReF~q~d~~~f~~~~~~~e~~~~v~~~~~~~l~~~G~~~ 169 (254)
T cd00774 91 IFVNFKNLLEFNRRKLPFGVAQIGKSFRNEISPRNGLFRVREFTQAEIEFFVDPEKSHPWFDYWADQRLKWLPKFAQSP 169 (254)
T ss_pred HHHHHHHHHHHhCCCCCchhhhhchhhccccCcccceeeeccchhhheeeeECCCCchHHHHHHHHHHHHHHHHcCCCc
Confidence 79999887754 7899999999999998754 4677899999999998765333 378999999999999853
No 468
>PLN02734 glycyl-tRNA synthetase
Probab=99.59 E-value=1.1e-14 Score=176.43 Aligned_cols=121 Identities=19% Similarity=0.161 Sum_probs=99.3
Q ss_pred CCce-EEeccHHHHHhhcc-CCC------------CCCCCCCCceEEEEEcCCC-ccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1036 PSGV-GASLALETIIQHYP-VDF------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1036 ~pAv-GfaiglerL~~~L~-~~~------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
+|.| --|+|++||+.++. +.. ..+...+|.+|.|+++..+ .....|.++++.||+.|++|+++..
T Consensus 528 iP~VIEPS~GIgRIl~AilE~s~~~~~~De~R~~L~~Pp~IAP~qVaIlPL~~~ee~~~~A~eLa~~LR~~GIrVelDd~ 607 (684)
T PLN02734 528 TPSVIEPSFGIGRIIYCLFEHSFYTRPGDEQLNVFRFPPLVAPIKCTVFPLVQNQQLNAVAKVISKELTAAGISHKIDIT 607 (684)
T ss_pred cCceEecCccHHHHHHHHHHHHhccccCCCcceEEecCcccCCcEEEEEEecCChHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 5655 67899999976653 111 1233467888888877533 3578999999999999999998765
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.++++++++|++.|+|++|+||. +|+|+||++++++|..++++++++.+.+.+++
T Consensus 608 -~~SIGKRyrrADeiGIPf~ItIG~----dgtVTIRdRdsgeQ~rV~ldeLv~~I~~li~~ 663 (684)
T PLN02734 608 -GTSIGKRYARTDELGVPFAVTVDS----DGSVTIRERDSKDQVRVPVEEVASVVKDLTDG 663 (684)
T ss_pred -CCCHhHHHHHHHHcCCCEEEEECC----CCeEEEEECCCCceEEeeHHHHHHHHHHHHcC
Confidence 679999999999999999999997 79999999999999999999999999888753
No 469
>COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis]
Probab=99.59 E-value=1.3e-14 Score=167.14 Aligned_cols=125 Identities=18% Similarity=0.175 Sum_probs=102.9
Q ss_pred CCce-EEeccHHHHHhhc-c-----CCC-------CCCCCCCCceEEEEEcCC-CccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1036 PSGV-GASLALETIIQHY-P-----VDF-------KPVRNEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1036 ~pAv-GfaiglerL~~~L-~-----~~~-------~~~~~~~~~~vlv~~~~~-~~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
+|.| -=|+|+||++-++ . ... ..++..+|.++.|+|+.. ++....|.++.+.||+.|+.|..+.
T Consensus 415 iP~VIEPSfGidRi~y~~l~~ay~~ee~~e~R~vLrl~p~lAPikvaVlPL~~k~~l~~~a~~i~~~L~~~~~~v~yDd- 493 (558)
T COG0423 415 IPHVIEPSFGIDRIFYALLEHAYTEEEVEEKRIVLRLPPDLAPIKVAVLPLVKKDELVEIAKEIFEKLRELGFNVDYDD- 493 (558)
T ss_pred cCceeccCCCchHHHHHHHHHhhcccccccceeEEecCcccCceEEEEEeeecccchhHHHHHHHHHHHhcCceEEecC-
Confidence 5654 6789999996544 2 111 112346788999999852 2478899999999999999998544
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
..++++.++++++.|.||+|.+..+.+++++||||+++|.+|..|++++|..+|...+.+.
T Consensus 494 -sGsIGrRYrR~DEIGtPfcVTvD~eTleD~tVTiReRDs~~QvRv~i~el~~~l~~~~~~~ 554 (558)
T COG0423 494 -SGSIGRRYRRQDEIGTPFCVTVDFETLEDNTVTIRERDSMEQVRVKIEELADYLRELIKGG 554 (558)
T ss_pred -CCcHhhhhhhccccCCceEEEecCCcccCCcEEEeecCchheeeeeHHHHHHHHHHHhccc
Confidence 3599999999999999999999999999999999999999999999999999999987654
No 470
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=3.6e-15 Score=186.79 Aligned_cols=190 Identities=21% Similarity=0.324 Sum_probs=144.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc---CCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e~~~~~ 430 (1170)
...|.+.+.||+|+||+||+|.+.. |+.||+|+=+....- +|+--.+++.+|+ -+.|..+..+++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~------ 764 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHV------ 764 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHc------
Confidence 4678999999999999999999985 999999986543221 1222334445555 122222222210
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....-++|+||.+ |+|.++++..+.+++..+..++.|++.-+++|
T Consensus 765 ----------------------------------~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~l 810 (974)
T KOG1166|consen 765 ----------------------------------FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHL 810 (974)
T ss_pred ----------------------------------cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHH
Confidence 1233479999998 89999999888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecC-------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 510 HGQGIIHRDLTPNNIFFDA-------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~-------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|..+|||+||||+|+||.. ...++|+|||-+-....- + .+ ..-+..++|-.+-.+|.+.|
T Consensus 811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lf--------p---~~--~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLF--------P---DG--TKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEc--------C---CC--cEEeeeeccccchhHHHhcC
Confidence 9999999999999999943 235999999998644211 0 00 12245678889999999999
Q ss_pred CCCCCccchhHHHHHHHHHhh
Q 001059 583 WPKIDEKADMYSLGIVFFELW 603 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELl 603 (1170)
..++..+|.|.|+.+++-|+
T Consensus 878 -rpWtYq~DyfGlAa~~h~mL 897 (974)
T KOG1166|consen 878 -RPWTYQIDYFGLAATVHVML 897 (974)
T ss_pred -CCCchhhhhHHHHHHHHHHH
Confidence 56999999999999999998
No 471
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.58 E-value=8.6e-15 Score=156.68 Aligned_cols=131 Identities=27% Similarity=0.322 Sum_probs=101.0
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-h-----hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-P-----VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~-----~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.||+|+||.||+|.+ +|..+++|+........ . ...++.+|+.+++.+.|+++....-++..
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---------- 68 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD---------- 68 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----------
Confidence 389999999999985 58899999865432111 1 12567789999999998875433222211
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....+++|||++| +|.+.+..... .++.+++.+|.+||+.|+
T Consensus 69 ------------------------------~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 69 ------------------------------PDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGI 111 (199)
T ss_pred ------------------------------CCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCe
Confidence 2234799999975 88877654321 788999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchh
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+|||++|.||+++ ++.+++.|||++..
T Consensus 112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999999 89999999999875
No 472
>PRK14894 glycyl-tRNA synthetase; Provisional
Probab=99.58 E-value=6.1e-14 Score=162.74 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=85.8
Q ss_pred CCCceEEEEEcCCC--ccHHHHHHHHHHHHHcCC-eEEEeeCCCCCHHHHHHHHHhCCCcEEEEE-------cCCcccCC
Q 001059 1062 EAGTSVLVCSRGGG--GLLVERMELVAELWEENI-KAQFVPVPDPSLTEQYEYASEHDIKCLVIL-------TDTGAQKG 1131 (1170)
Q Consensus 1062 ~~~~~vlv~~~~~~--~~~~~a~~ia~~LR~~Gi-~v~~~~~~~~~l~k~~~~A~~~gi~~~iii-------g~~e~~~~ 1131 (1170)
.+|.+|.|+++.++ .....|.++++.|++.|+ +|+++. +.+++++++.|+..|+||+|+| |++|.+++
T Consensus 432 LAPvQVaVLPLs~~~~~l~eyAkeI~~~L~~~Gi~rv~~Dd--sesIGKKyRraDeiGiPy~ITVD~~Tl~dGdkE~e~g 509 (539)
T PRK14894 432 LAPIKVAVFPLKRNHEGLVATAKAVRRQLQVGGRMRTVYDD--TGAIGKLYRRQDEIGTPFCITVDFDTIGQGKDPALAG 509 (539)
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHHHHCCCceEEEcC--CCCHhHHHHhhhccCCCEEEEEeccccccccchhhcC
Confidence 57889999999621 234899999999999998 999766 3489999999999999999999 88999999
Q ss_pred eEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1132 LVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1132 ~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
+|+||++++++|..++++++++.|.+.+
T Consensus 510 TVTVR~RDs~eQ~rV~ideli~~L~~~~ 537 (539)
T PRK14894 510 TVTVRDRDTMAQERVPISELEAYLRDRV 537 (539)
T ss_pred eEEEEEeCCCeEEEEEHHHHHHHHHHHh
Confidence 9999999999999999999999998765
No 473
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=2.8e-16 Score=193.31 Aligned_cols=260 Identities=24% Similarity=0.363 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
...|.+.+.||+|+|+.|-++.... ....+|+|.+.....+.........|..+-+.+. |+|++.+++...
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~------- 91 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS------- 91 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-------
Confidence 4577888899999999998887743 3456788877666544455566667888888887 999999987653
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVF-ESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l-~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....++.++|.. +++...+ .... ..+...+..++.|+..++.|
T Consensus 92 ---------------------------------~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~ 138 (601)
T KOG0590|consen 92 ---------------------------------SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSY 138 (601)
T ss_pred ---------------------------------CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccc
Confidence 3456688899975 4777776 5444 67888899999999999999
Q ss_pred HH-hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCccccc-CccCCCcccccCCCC
Q 001059 509 IH-GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG-TYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LH-s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~ 585 (1170)
+| ..++.||||||+|.+++..+ .++++|||+|..+... .+........+| ++.|+|||.+.+...
T Consensus 139 ~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~ 206 (601)
T KOG0590|consen 139 LHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK------------NGAERSLKDRCGSSPPYGAPEHLSGKAY 206 (601)
T ss_pred cCcccccccCCCCCccchhccCCCcccCCCchhhcccccc------------CCcceeeecccCCCCCCCCcccccchhh
Confidence 99 99999999999999999999 9999999999876431 011122344578 999999999988556
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..+..|+||.|+++.-+++ |+............+... .. ....|........+++.+++..+|..|.+.+++-.+
T Consensus 207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 7889999999999999985 655443322221111111 11 234566777788999999999999999999999999
Q ss_pred cCCCC
Q 001059 661 ALPPQ 665 (1170)
Q Consensus 661 ~~~~~ 665 (1170)
+|...
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 98876
No 474
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.56 E-value=1.3e-14 Score=153.57 Aligned_cols=136 Identities=26% Similarity=0.301 Sum_probs=93.8
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHH----------------------HHHHHHHHhccCCC--
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI----------------------LREVATLSRLQHQH-- 415 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~----------------------~~Ev~iL~~l~Hpn-- 415 (1170)
.+.||+|+||+||+|.+. +|+.||||+++............ ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999987 89999999987543322111111 23333443433222
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHH-HHHHhcCCCCHH
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR-QVFESYDHFDKE 493 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~-~~l~~~~~l~e~ 493 (1170)
+.+.+++ ...+++|||+++ ++. ..+.... . ..
T Consensus 81 ~~~~~~~--------------------------------------------~~~~lv~e~~~g~~~~~~~l~~~~-~-~~ 114 (187)
T cd05119 81 VPKPIDL--------------------------------------------NRHVLVMEFIGGDGIPAPRLKDVR-L-LE 114 (187)
T ss_pred CCceEec--------------------------------------------CCCEEEEEEeCCCCccChhhhhhh-h-cc
Confidence 1122111 124899999986 221 1121111 1 16
Q ss_pred HHHHHHHHHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 494 LAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
.+..++.+++.++.++|+ +||+||||||+||+++ ++.++|+|||.+...
T Consensus 115 ~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 115 DPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred cHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 788999999999999999 9999999999999999 899999999999754
No 475
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.56 E-value=1.8e-14 Score=177.60 Aligned_cols=136 Identities=26% Similarity=0.282 Sum_probs=105.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCh-----hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~-----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.|...+.||+|+||+||+|.+. +..+++|+...+. ... ....++.+|+.+++.++|++|+..+.++..
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---- 407 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD---- 407 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe----
Confidence 4456789999999999999885 4445555432221 111 123568899999999999998876544422
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....++||||++| +|.+++. ....++.|++.+|.|
T Consensus 408 ------------------------------------~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~ 443 (535)
T PRK09605 408 ------------------------------------PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAK 443 (535)
T ss_pred ------------------------------------CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHH
Confidence 1235799999975 8888775 356789999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
||++|++||||||+|||+ .++.++|+|||+++.
T Consensus 444 lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 444 LHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 999999999999999999 678999999999975
No 476
>COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.51 E-value=4.3e-14 Score=167.13 Aligned_cols=400 Identities=14% Similarity=0.091 Sum_probs=235.3
Q ss_pred hcccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCcee
Q 001059 704 HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLL 777 (1170)
Q Consensus 704 ~~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~l 777 (1170)
..++.++ +..+|+..|+|...+++++|++.+++.+++.|.+++..|+| .-.++++.+..+||+++|++++.+
T Consensus 27 ~rAg~i~--~~~~G~y~~lP~g~rv~~kI~~iir~em~~~G~~Evl~P~L~p~eLwkEs~r~~~f~~El~~v~drg~~~l 104 (500)
T COG0442 27 LRAGMIR--KPVKGLYVWLPLGLRVLEKIENIIREEMDKIGAQEVLFPTLIPAELWKESGRWEGFGPELFRVKDRGDRPL 104 (500)
T ss_pred HhcCcee--cccCceEEECccHHHHHHHHHHHHHHHHHhcCceEEechhcCHHHHHHHhChhhhcchhhEEEEccCCcee
Confidence 3455555 47899999999999999999999999999999999999999 223447778999999999999999
Q ss_pred eecCC----CCHHHHHHHHhCCCCceeEEEecCeEEcC-CCC---CCCCceeEeEEEEeCCCCcccHH---HHHHHHHHH
Q 001059 778 ELSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDI 846 (1170)
Q Consensus 778 aLRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~---~~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~ 846 (1170)
+|||. +|.-+..++.+++.+|+++|+++++||+| +|. .|.|||+--++.-|-.+...++. +++.+..++
T Consensus 105 ~L~PTsEe~it~~~~~~i~SYkdLPl~lYQi~~kfRdE~rpr~gllR~REF~mkdaySfh~~~e~a~~~y~~~~~~Y~~i 184 (500)
T COG0442 105 ALRPTSEEVITDMFRKWIRSYKDLPLKLYQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHADEEDAEETYEKMLDAYSRI 184 (500)
T ss_pred eeCCCcHHHHHHHHHHHhhhhhhCCcceeeeeeEEeccccCCCCccchheeeecccccccCCHHHHHHHHHHHHHHHHHH
Confidence 99995 55666668888999999999999999996 344 46678988888777666556665 456667888
Q ss_pred HHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHH-HHHHHHHHc-CCcHHHHH-
Q 001059 847 VTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVV-IRRQLLQEL-NLAEAVVN- 923 (1170)
Q Consensus 847 l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~~~~~- 923 (1170)
+.++|+. +...--+.++..+-... ..+.+.+++-.+...... .-..+-... .+..+..+
T Consensus 185 f~~i~l~--~~~~~ad~g~~Gg~~S~----------------eF~~l~pd~ge~qi~ts~~y~aN~e~a~~~~~~~~~~~ 246 (500)
T COG0442 185 FLRLPLI--FGPVPADEGFIGGSYSH----------------EFEALMPDGGEDQIATSHHYGANFEKAFIDIKFEDEEE 246 (500)
T ss_pred HHhCCce--EEeecccCCCCCCccce----------------EEEEEccCCCccEEEEecchHHhHHHhccCCCcccccc
Confidence 8888874 56555554443211100 000000000000000000 000000000 00000000
Q ss_pred HHHHHH---H-HhcCChhhHHHHHhccC-CCC--------------------------h--hHHHHHHHH--HHHHccCc
Q 001059 924 RLQTVG---L-RFCGAADQALPRLRGAL-PAD--------------------------K--PTRKALDEL--YLRIWRIE 968 (1170)
Q Consensus 924 ~l~~l~---~-~~~g~~~~~l~~l~~~~-~~~--------------------------~--~~~~~l~~L--~l~~~g~~ 968 (1170)
.-..+. . -++.. . .+..++ ..+ . ...+.-.++ .+.. +.
T Consensus 247 ~~~~~v~t~s~~~s~r--~---~~~~i~i~GDn~G~v~Pp~vA~~qV~~~~~~~~ga~~h~~~~~~~rd~~~~l~~--~~ 319 (500)
T COG0442 247 GELEYVHTTSYGISTR--I---IGAAILIHGDNEGLVLPPIVADIQVVIVPIFIKGANEHYKVVNYGRDVAEPLEK--LG 319 (500)
T ss_pred ccceEecccceEEEee--e---eeEEEEEecCCCCccCCchhccceEEEEeccccCcchhhhhhhhhhhhhhhhhh--cc
Confidence 000000 0 00000 0 000000 000 0 000111111 1111 11
Q ss_pred ceEEEc-cC-CCCCCCcc------cceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceE
Q 001059 969 KNIYID-AL-MPPIESYH------RNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVG 1040 (1170)
Q Consensus 969 ~~i~~D-l~-lvrgldYY------tG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvG 1040 (1170)
..+..| .+ ...|.-|| .|.+|+ -|=||-.- ++. -+....|...+.-.+-
T Consensus 320 ~~~~~D~~~~~~~G~kl~~~e~ieVghif~-------------------lG~kyse~---~~a-~v~~r~g~~~~~~mg~ 376 (500)
T COG0442 320 IRVEGDDRSPDGPGFKLNIWEGIEVGHIFE-------------------LGTKYSEA---MNA-TVLDRDGKEQPKTMGC 376 (500)
T ss_pred eEEeccccCCCCCCceeeeeeccccCEEEE-------------------ECchhhhh---Cee-EEEecCCCccceEEEe
Confidence 234444 21 12222122 123333 35555432 110 0122334443233445
Q ss_pred EeccHHHH-HhhccC-----CCCCCCCCCCceEEEEEcCCCc--cHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHH
Q 001059 1041 ASLALETI-IQHYPV-----DFKPVRNEAGTSVLVCSRGGGG--LLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEY 1111 (1170)
Q Consensus 1041 faiglerL-~~~L~~-----~~~~~~~~~~~~vlv~~~~~~~--~~~~a~~ia~~LR~~G-i~v~~~~~~~~~l~k~~~~ 1111 (1170)
+++|++|+ .+++++ +...+.+.++.++.|+..+..+ ....+.++...|..+| ..|.+..+ +.+.+-.+..
T Consensus 377 ygigvsr~v~a~ieq~~d~~gi~w~~a~apf~~~iv~~n~~~~~~~~~~~~~~~~l~~~G~~e~~~ddr-~er~g~k~~~ 455 (500)
T COG0442 377 YGIGVSRLVAALLEQIHDENGIIWPKAIAPFDVHIVPVNTKDFKQAEAAEKLYVELPWCGTVEVLLDDR-DERPGVKFAD 455 (500)
T ss_pred hhhhhhhHHHHHHHHhcccccCccccccCcceeEEEEcCchhHHHHHHhhhHHHHHHhCCchhhhhhhh-ccccCccccC
Confidence 68999995 445542 3333336778888888886321 2233345677888899 88887666 6678888999
Q ss_pred HHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 001059 1112 ASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1112 A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l 1155 (1170)
|+..|+|+.+++|++ .++|.+.+|.+.+|+...++...+...+
T Consensus 456 a~liGiP~~~~~g~~-~~~g~~e~k~r~~ge~~~~~~~~l~~~~ 498 (500)
T COG0442 456 ADLIGIPLRIVVGKR-LAEGEVEVKCRKCGEKEAVTIEALFARL 498 (500)
T ss_pred CeEecccceeeeccc-ccCCceeEEecCCCchhhccHHHHHHHh
Confidence 999999999999999 8889999999999999999888877654
No 477
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.51 E-value=1.1e-14 Score=171.77 Aligned_cols=261 Identities=24% Similarity=0.326 Sum_probs=192.7
Q ss_pred cCCceEEeeecc--CCcEEEEEEEE--ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGH--GGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~--G~fG~Vyka~~--~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...|.....+|. |.+|.||.++. ..++..+|+|.-+..........+=++|+...+++ .|+|.++.+..|.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e---- 188 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE---- 188 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc----
Confidence 344556677888 99999999999 88999999998544433333334456778777777 5999999777763
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC-CCHHHHHHHHHHHHH---
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVE--- 504 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~~i~~qI~~--- 504 (1170)
....+|+.+|+|+.+|..+.+.... ++...++..+.+..+
T Consensus 189 ------------------------------------~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~ 232 (524)
T KOG0601|consen 189 ------------------------------------GSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDV 232 (524)
T ss_pred ------------------------------------cCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhccc
Confidence 2456799999999999888876554 889999999999999
Q ss_pred -HHHHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 505 -GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 505 -gL~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
||.++|+.+++|-|+||.||++..+ ..++++|||+...+........ ........|...|++||.+++
T Consensus 233 ~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~----------~~~~~r~~~~~~Y~~ke~~~~ 302 (524)
T KOG0601|consen 233 TALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSV----------FKVSKRPEGDCIYAAKELLNG 302 (524)
T ss_pred ccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccc----------eeeeecCCCCceEeChhhhcc
Confidence 9999999999999999999999999 8899999999987754432211 111122257889999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 583 WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
-++.+.|+||+|.++.+..+........-...........+|..+ ...+.++...+..|++.+|..|+++..++.+.
T Consensus 303 --l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~ 380 (524)
T KOG0601|consen 303 --LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALN 380 (524)
T ss_pred --ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccc
Confidence 589999999999999887641111110000000000122233332 24455677799999999999999999999998
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
+.+.+
T Consensus 381 ~i~s~ 385 (524)
T KOG0601|consen 381 VIHSK 385 (524)
T ss_pred cccch
Confidence 77744
No 478
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.48 E-value=3.8e-13 Score=148.51 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=103.9
Q ss_pred eeec-cCCcEEEEEEEEccCCcEEEEEEEecCCC-----------ChhhHHHHHHHHHHHHhccCCCc--eeEEEEEeec
Q 001059 361 QPLG-HGGFGHVVLCKNKLDGRHYAVKKIRLKDK-----------SLPVNDRILREVATLSRLQHQHV--VRYYQAWFET 426 (1170)
Q Consensus 361 ~~LG-~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-----------~~~~~~~~~~Ev~iL~~l~HpnI--V~l~~~~~e~ 426 (1170)
..|| .||.|+||++... +..+|||.+..... +.....++.+|+.++..+.|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4677 8888999988775 78899998854221 11223568899999999999885 5555443211
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC--cHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
. ......++||||++| +|.+++.. ..+++.. +.||+.
T Consensus 115 ~------------------------------------~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~ 153 (239)
T PRK01723 115 H------------------------------------GLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQ 153 (239)
T ss_pred c------------------------------------CcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHH
Confidence 0 001223699999975 78887754 3455543 578999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+|.+||++||+||||||.|||++.++.++|+|||.++.
T Consensus 154 ~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 154 LIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999999999989999999999875
No 479
>TIGR02367 PylS pyrrolysyl-tRNA synthetase. PylS is the archaeal enzyme responsible for charging the pyrrolysine tRNA, PylT, by ligating a free molecule of pyrrolysine. Pyrrolysine is encoded at an in-frame UAG (amber) at least in several corrinoid-dependent methyltransferases of the archaeal genera Methanosarcina and Methanococcoides, such as trimethylamine methyltransferase.
Probab=99.47 E-value=2.7e-13 Score=155.98 Aligned_cols=123 Identities=11% Similarity=0.153 Sum_probs=101.9
Q ss_pred hhhhHHhHHHHHHHHcCCcccccccee---c---cCC--CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCC---C
Q 001059 728 LRDYVVQVTKEMFRQHCAKHLEIEPMY---L---LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ---K 796 (1170)
Q Consensus 728 ~~~~I~~~i~~~f~~~Gy~~I~tP~~~---~---~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~---~ 796 (1170)
-.+.+++.++++|..+||++|.||+|. + ++. +....++||++. +.++||||+|++++|+++.+. .
T Consensus 241 ~~~~Led~IRevfvg~GFqEV~TPtLt~eE~~E~m~~~~g~eI~n~Iyk~e----e~lvLRPdLTPsLaR~La~N~~~l~ 316 (453)
T TIGR02367 241 YLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRVD----KNFCLRPMLAPNLYNYLRKLDRALP 316 (453)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCeecchHHHHhhcCccCCcccccceEec----CceEecccCHHHHHHHHHHhhhhcc
Confidence 457899999999999999999999992 2 122 344677899873 368999999999999988743 4
Q ss_pred CceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 797 SSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 797 ~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
.|+|+||+|+|||+|.++. +.+||+|+|++++|.+...+|+| .++.++|+.||+. +.+
T Consensus 317 ~PqKIFEIGkVFR~E~~~~thlREF~QL~~eIaG~~atfaDle--alL~e~Lr~LGId--fei 375 (453)
T TIGR02367 317 DPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--AIIKDFLDHLEID--FEI 375 (453)
T ss_pred CCeeEEEEcCeEecCCCCCCCcCeEEEEEEEEECCCCCHHHHH--HHHHHHHHHCCCc--eEE
Confidence 5999999999999987654 45679999999999998888777 5999999999983 666
No 480
>PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes. seryl tRNA synthetase structure; InterPro: IPR002314 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain includes the glycine, histidine, proline, threonine and serine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3UH0_A 3UGT_C 3UGQ_A 1B76_B 1GGM_B 1ATI_A 1ADY_C 1ADJ_C 2I4O_A 2I4M_B ....
Probab=99.45 E-value=1.8e-13 Score=143.65 Aligned_cols=136 Identities=15% Similarity=0.187 Sum_probs=111.1
Q ss_pred hhhhHHhHHHHHHH-HcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHh-----CC
Q 001059 728 LRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS-----NQ 795 (1170)
Q Consensus 728 ~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~-----~~ 795 (1170)
+++.|++.+++.+. ++||++|.||+| .+ .++.....++||++.|.+++.++|||+.++++++++.. ++
T Consensus 1 l~~~l~~~~~~~~~~~~G~~ev~~P~l~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~~~~~ 80 (173)
T PF00587_consen 1 LRNALERFIREEFVLKFGFQEVDTPILIPSEVWEKSGHWDNFSDEMFKVKDRGDEEYCLRPTSEPGIYSLFKNEIRSSYR 80 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEB--SEEEHHHHHHHSHHHHHGGGSEEEEETTTEEEEE-SSSHHHHHHHHHHHEEBHGG
T ss_pred CHHHHHHHHHHHhHHhcCCEEEECCeEEehHHhhhccccccccCCeeeeeecccccEEeccccccceeeeecceeeeccc
Confidence 46789999999999 999999999999 22 22345567889999999999999999999999998877 23
Q ss_pred CCceeEEEecCeEEcC-CCC---CCCCceeEeEEEEeCCC--CcccHHHHHHHHHHHHHHcCCCcceEEEeCcHH
Q 001059 796 KSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 864 (1170)
Q Consensus 796 ~~P~r~~Y~g~VfR~e-~~~---~~~~ef~Q~GvEiiG~~--~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 864 (1170)
..|+|+|++|++||+| ++. .|.+||+|.++++||.+ ......+++.++.++++.||+. ++.+.+++++
T Consensus 81 ~LP~~~~~~g~~fR~E~~~~~gl~R~reF~~~e~~~f~~~~~~~~~~~~~~~~~~~i~~~lgl~-~~~~~~~~~~ 154 (173)
T PF00587_consen 81 DLPLKLYQIGTCFRNEARPTRGLFRLREFTMDEMHIFCTPEQSEEEFEELLELYKEILEKLGLE-PYRIVLSSSG 154 (173)
T ss_dssp GSSEEEEEEEEEEBSSSSSBSTTTS-SEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTSG-CEEEEEEETC
T ss_pred cCCeEEeecccccccccccccccceeeEeeeeceEEEeCCcccHHHHHHHHHHHHHHHHHcCCc-eEEEEEcCCC
Confidence 4699999999999998 444 35567999999999998 3356679999999999999994 3999998864
No 481
>KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=99.43 E-value=1.4e-12 Score=142.57 Aligned_cols=352 Identities=10% Similarity=0.101 Sum_probs=203.1
Q ss_pred cccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceee
Q 001059 705 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLE 778 (1170)
Q Consensus 705 ~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~la 778 (1170)
.-|+++ +...|+.-|+|...+..+++.+.+..-+..-|.+.|..|++ ...+.++....+||+|.|+.|+.+|
T Consensus 33 e~GfI~--ps~~G~yq~LPlg~R~~~K~~~~l~~~mqs~Ga~kIslp~ls~~~LWekTgRw~~~gsEl~rl~Dr~gkq~c 110 (457)
T KOG2324|consen 33 EVGFIR--PSSPGLYQLLPLGLRVLNKLCRLLDNEMQSGGAQKISLPILSSKELWEKTGRWDAMGSELFRLHDRKGKQMC 110 (457)
T ss_pred HhCccc--cCCCCceeeccchHHHHHHHHHHHHHHHHhccCeeEeecccChHHHHHhcCcccccchhheEeeccCCCEec
Confidence 345555 66789999999999999999999999999999999999999 3344577788999999999999999
Q ss_pred ecCCCCHHHHHHHHh-----CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHH--------HHH
Q 001059 779 LSHELRLPFIRWAIS-----NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAE--------VLK 841 (1170)
Q Consensus 779 LRPD~T~~iaR~~~~-----~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaE--------vi~ 841 (1170)
|-|.---.|.+.+++ +++.|+++|++|+-||.| +|+. |.|||+.-|.=-| ..|.| |..
T Consensus 111 L~pThEE~iT~lmat~~~lsykqlPi~vYQigrKfRDElrpRfGLlRgREFlMKDmYsF-----d~~~etA~qTy~~v~~ 185 (457)
T KOG2324|consen 111 LTPTHEEDITALMATYIPLSYKQLPIRVYQIGRKFRDELRPRFGLLRGREFLMKDMYSF-----DSDEETAQQTYQLVDQ 185 (457)
T ss_pred cCCchHHHHHHHHHhcCccccccCcEEeeeechhhhhccCccccchhhHHHHHhhhhcc-----cCCHHHHHHHHHHHHH
Confidence 999544455555554 456799999999999996 5664 3456999888433 33333 334
Q ss_pred HHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHH
Q 001059 842 VTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 921 (1170)
Q Consensus 842 la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 921 (1170)
....+++.||+. |.-.=.+.+.+.+- ++-| +.-...++.+.+ ..+..-+
T Consensus 186 aY~~iFkqL~~p--fVkv~AdsG~iGG~-----vShE--------fhl~~~vgED~l-----------~~C~~C~----- 234 (457)
T KOG2324|consen 186 AYDRIFKQLGLP--FVKVWADSGDIGGE-----VSHE--------FHLIHPVGEDTL-----------MSCPSCG----- 234 (457)
T ss_pred HHHHHHHHcCCC--eEEEeecccccCce-----eeee--------EeccCccCccce-----------eecCcCC-----
Confidence 445555666664 22111121111110 0000 000000000000 0000000
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCC----CCCcccceEEEEEeccCC
Q 001059 922 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP----IESYHRNLFFQVFSVKEK 997 (1170)
Q Consensus 922 ~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr----gldYYtG~VFe~~~~~~~ 997 (1170)
+.++ .+.++.-+...+.++ .+. ++.-++ |..||-|..
T Consensus 235 ----------~s~n-~e~~~~sk~~~Cp~C----------------~~~---~L~~~~~IEVgHtF~LG~k--------- 275 (457)
T KOG2324|consen 235 ----------YSKN-SEDLDLSKIASCPKC----------------NEG---RLTKTKSIEVGHTFLLGTK--------- 275 (457)
T ss_pred ----------ccCc-hhhhcCCccccCCcc----------------cCC---CcccccceEEEEEEEeccc---------
Confidence 0011 111110000000000 000 111112 233333332
Q ss_pred Ccccccccceeccccccchh-hhhcccccccccCCCCCCCCceEEeccHHHHHhhcc------CCCCCCCCCCCceE-EE
Q 001059 998 YPATLVEGTLLAVGGRYDYL-LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSV-LV 1069 (1170)
Q Consensus 998 ~~~~~~~~~~I~~GGRYD~L-~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~------~~~~~~~~~~~~~v-lv 1069 (1170)
|..- -.+| +..-|+.+-.-...++||+.||+++.. .+..++...+|.+| +|
T Consensus 276 ----------------YS~~lna~f-----~~~~gKpe~l~MgCyGIGVtRllaAa~evls~~~~lrwP~~iAPy~vcli 334 (457)
T KOG2324|consen 276 ----------------YSKPLNAKF-----VNVEGKPEFLHMGCYGIGVTRLLAAAAEVLSDDKGLRWPSLIAPYKVCLI 334 (457)
T ss_pred ----------------cccccCcee-----eeecCCcceEEecceeccHHHHHHHHHHHhccccccccccccCcceeEEe
Confidence 2221 1111 111122111112234799999976542 23334445778888 66
Q ss_pred EEcCCCccHHHHHHHHHHHHHcC------CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEc-CCcccCCeEEEEEcCCCc
Q 001059 1070 CSRGGGGLLVERMELVAELWEEN------IKAQFVPVPDPSLTEQYEYASEHDIKCLVILT-DTGAQKGLVKVRHLDVKK 1142 (1170)
Q Consensus 1070 ~~~~~~~~~~~a~~ia~~LR~~G------i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig-~~e~~~~~v~vk~l~~~e 1142 (1170)
.+.. ....+.+.+++.+|-... -.+.+.+.....++++++.|++.||||+||+| ..-..+..+.|+-...||
T Consensus 335 ~pk~-~~~~q~~~ev~~el~~~~~~~~l~~~iLlddr~~ltiG~Ri~dA~~lG~PfviVvg~s~~~~~~~~EV~~~~~ge 413 (457)
T KOG2324|consen 335 GPKK-GSKSQRAQEVISELLNDEAVGNLHGEILLDDREELTIGKRIKDANRLGIPFVIVVGNSASWDNPEIEVRTIRWGE 413 (457)
T ss_pred ccCC-cchhhhHHHHHHHhhcchhhhhhccceeccchhhhhhHHhhhhHHhcCCCEEEEEcccccCCCceEEEEEeecCc
Confidence 5553 555666677776554321 12333444456799999999999999999999 555566799999999999
Q ss_pred ccccchHHHHHHH
Q 001059 1143 EKEVQRESLVRFL 1155 (1170)
Q Consensus 1143 q~~v~~~~l~~~l 1155 (1170)
...+..+.+.+.+
T Consensus 414 ~~~l~~~~~~~l~ 426 (457)
T KOG2324|consen 414 SAELDKDGFMKLL 426 (457)
T ss_pred eeccchhhHHHHh
Confidence 8888777765544
No 482
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.41 E-value=1.9e-13 Score=167.87 Aligned_cols=282 Identities=22% Similarity=0.227 Sum_probs=205.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..+++.+.+-+-+|+++.++.+.-..+|...++|+......-.. ..+...++-.++-...||-+++..-.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s--------- 872 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS--------- 872 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC---------
Confidence 45788899999999999999998888887777776543221100 11122222222222233444332210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......++++|+|.+ ++|...++..+..+.+.++.++..+..+++|||
T Consensus 873 -------------------------------~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~ 921 (1205)
T KOG0606|consen 873 -------------------------------FPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLH 921 (1205)
T ss_pred -------------------------------CCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccc
Confidence 012456789999996 599999999888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccc-ccc-----------CCCCCCCCCC----ccccCcccccCccC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ-LDQ-----------DAAFPTDTGG----VSVDGTGQVGTYFY 574 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~-~~~-----------~~~~~~~~~~----~~~~~~~~~GT~~Y 574 (1170)
+..+.|||++|.|+|+..+++.+++|||.......-. ... ........+. ........+||+.|
T Consensus 922 s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~ 1001 (1205)
T KOG0606|consen 922 SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDY 1001 (1205)
T ss_pred cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcc
Confidence 9999999999999999999999999999554332110 000 0000000011 11224456899999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
.+||.+.+ ......+|+|++|++++|.++ ||.......++..++......|......++++++++.+++..+|.+|
T Consensus 1002 laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred cCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence 99999998 567899999999999999986 78777777777777766666666666778899999999999999999
Q ss_pred CCHH---HHHhccCCCCchHHHHHHHH
Q 001059 652 PSAT---ELLQDALPPQMEYELLDNIL 675 (1170)
Q Consensus 652 Pta~---eiL~~~~~~~~~~~~~~~~~ 675 (1170)
..+. ++-.|+||+...|+.+..-.
T Consensus 1081 ~~a~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred cCcccccccccCCccCCCCcccccccc
Confidence 9888 88999999999988775543
No 483
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.40 E-value=1.4e-12 Score=131.26 Aligned_cols=131 Identities=28% Similarity=0.328 Sum_probs=105.3
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC--CCceeEEEEEeecCccccCCCCC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H--pnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
+++.||.|.++.||++... +..+++|....... ...+.+|+..++.++| +++++++....
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~------------ 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGE------------ 63 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcC------------
Confidence 3578999999999999985 47899998764322 4568899999999977 48888775541
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 512 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~--- 512 (1170)
.....|++|||+++ .+... +......++.+++.+|+++|..
T Consensus 64 ----------------------------~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 64 ----------------------------SDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLL 108 (155)
T ss_pred ----------------------------CCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCce
Confidence 12457999999976 34332 4556677889999999999985
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+++|+||+|.|||++..+.+++.|||.++.
T Consensus 109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 109 VLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCCcceEEEECCcEEEEEecccccC
Confidence 699999999999999989999999999874
No 484
>PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional
Probab=99.40 E-value=9.6e-13 Score=159.38 Aligned_cols=147 Identities=10% Similarity=0.044 Sum_probs=118.1
Q ss_pred ccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccceec---------c----------C----CC-c--c
Q 001059 708 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL---------L----------G----DC-P--Q 761 (1170)
Q Consensus 708 ~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~---------~----------~----~~-~--~ 761 (1170)
+...|-...| +|++|.+...+.++++.++++|..+||++|.||.++. . . +. . .
T Consensus 215 ~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~Gf~e~~~p~vE~~~~nfd~lf~p~~hpaR~~~dtf~~~~~~~~~ 293 (489)
T PRK04172 215 FRPYNVKAPP-PKIYPGKKHPYREFIDEVRDILVEMGFEEMKGPLVETEFWNFDALFQPQDHPAREMQDTFYLKYPGIGD 293 (489)
T ss_pred CccceeCCCC-CCCCCCCCChHHHHHHHHHHHHHHCCCEEeeCCeeeecCcccccccCCCCCCCCCccceEEECCccccc
Confidence 3445555566 8999999999999999999999999999999999921 1 0 00 0 0
Q ss_pred c--------------------ccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEecCeEEcCCCCC-CCCce
Q 001059 762 F--------------------KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHS-PPNRY 820 (1170)
Q Consensus 762 ~--------------------~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~-~~~ef 820 (1170)
. ..=+|.|.+..++.++|||++|++++|+++++...|+|+|++|+|||++.++. +.+||
T Consensus 294 ~~~~~~~~v~~~he~g~~~~~~~~~y~~~~~~~~~~~LR~~~T~~~~r~l~~~~~~p~rlFeiGrVFR~e~~d~~~l~Ef 373 (489)
T PRK04172 294 LPEELVERVKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLASRPEPPQKYFSIGRVFRPDTIDATHLPEF 373 (489)
T ss_pred CcHHHHHHHHHHHhccCCCCCccccCCcchhhhhccccccCChHHHHHHHHhcCCCCeEEEEecceEcCCCCCcccCCch
Confidence 0 00157777777889999999999999999988888999999999999987663 45689
Q ss_pred eEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 821 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 821 ~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
+|+++.++|.+ ...+|++.++.+++.++|+.+ +.+
T Consensus 374 ~ql~~~i~G~~--~~f~elkg~l~~ll~~lGi~~-~~~ 408 (489)
T PRK04172 374 YQLEGIVMGED--VSFRDLLGILKEFYKRLGFEE-VKF 408 (489)
T ss_pred heEEEEEEeCC--CCHHHHHHHHHHHHHHhCCce-EEE
Confidence 99999999974 347899999999999999853 443
No 485
>cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain. ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from archaea, the cytoplasm of eukaryotes and some bacteria.
Probab=99.38 E-value=4.8e-13 Score=149.43 Aligned_cols=140 Identities=10% Similarity=0.130 Sum_probs=114.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccCCc----eeeecCC
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 782 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRPD 782 (1170)
.+.|+.+|+|.++.+++.|++.+++.+.++||++|.||.+ .+. ++.+...++||++.|.+++ .++|||+
T Consensus 20 ~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~sg~~~~f~~~~f~~~~~~~~~~~~~~~L~Pt 99 (261)
T cd00778 20 PVKGCMVFRPYGYAIWENIQKILDKEIKETGHENVYFPLLIPESELEKEKEHIEGFAPEVAWVTHGGLEELEEPLALRPT 99 (261)
T ss_pred CCCCeEEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhhhcchhhcCcceEEEEecCCcccCCcEEEcCC
Confidence 4679999999999999999999999999999999999999 222 2245568899999998754 7999999
Q ss_pred ----CCHHHHHHHHhCCCCceeEEEecCeEEcCCCC----CCCCceeEeEEEE-eCCCCcc-cH-HHHHHHHHHHHHHc-
Q 001059 783 ----LRLPFIRWAISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASAL-TE-AEVLKVTMDIVTRF- 850 (1170)
Q Consensus 783 ----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEi-iG~~~~~-aD-aEvi~la~~~l~~l- 850 (1170)
+|..+++.+.+++..|+|+|++|++||+|..+ .|.+||+|.++.. +...+.. .. .+++.++.++++.|
T Consensus 100 ~e~~~~~~~~~~i~s~r~LPlr~~~~~~~fR~E~~~~~Gl~R~reF~~~d~h~~~~~~e~~~~~~~~~~~~~~~i~~~ll 179 (261)
T cd00778 100 SETAIYPMFSKWIRSYRDLPLKINQWVNVFRWETKTTRPFLRTREFLWQEGHTAHATEEEAEEEVLQILDLYKEFYEDLL 179 (261)
T ss_pred CCHHHHHHHHhhccchhhcCHHHHhhhhhccCCCCCCCceeEeeeeeeeceeeccCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888877777899999999999998654 2456799999975 5544321 11 36788889999988
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|++
T Consensus 180 gl~ 182 (261)
T cd00778 180 AIP 182 (261)
T ss_pred CCe
Confidence 885
No 486
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=99.34 E-value=3.8e-12 Score=119.57 Aligned_cols=90 Identities=24% Similarity=0.419 Sum_probs=84.1
Q ss_pred eEEEEEcCCC---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCc
Q 001059 1066 SVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1142 (1170)
Q Consensus 1066 ~vlv~~~~~~---~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~e 1142 (1170)
+|+|++++ . +....|.++++.||+.|++|++++. +.++++++++|++.|+||++++|++|.++|+|+||++.+++
T Consensus 1 qv~Ii~~~-~~~~~~~~~a~~l~~~L~~~gi~v~~d~~-~~~~~k~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~ 78 (94)
T PF03129_consen 1 QVVIIPVG-KKDEEIIEYAQELANKLRKAGIRVELDDS-DKSLGKQIKYADKLGIPFIIIIGEKELENGTVTVKDRDTGE 78 (94)
T ss_dssp SEEEEESS-CSHHHHHHHHHHHHHHHHHTTSEEEEESS-SSTHHHHHHHHHHTTESEEEEEEHHHHHTTEEEEEETTTTE
T ss_pred CEEEEEeC-CCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCchhHHHHHHhhcCCeEEEEECchhHhCCEEEEEECCCCc
Confidence 47888986 5 6788999999999999999999885 78999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHH
Q 001059 1143 EKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1143 q~~v~~~~l~~~l~~ 1157 (1170)
+..+++++++++|++
T Consensus 79 ~~~v~~~el~~~l~~ 93 (94)
T PF03129_consen 79 QETVSLEELIEYLKE 93 (94)
T ss_dssp EEEEECCHHHHHHHH
T ss_pred EEEEEHHHHHHHHhh
Confidence 999999999999875
No 487
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=1.1e-12 Score=154.87 Aligned_cols=250 Identities=25% Similarity=0.265 Sum_probs=182.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~-~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.+++..+|.++..||.|.|+.|+.+..+ .++..|++|.+...-........-..|+.+...+ .|.++++++..|.+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-- 337 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-- 337 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--
Confidence 5778899999999999999999998866 6788999998765444333333446788887777 69999999888743
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
.+..||..|||. +++.........+++...+++..|++.++
T Consensus 338 --------------------------------------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 --------------------------------------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --------------------------------------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 345579999995 45554444444588889999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCC-CcccccCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT-APEIEQGWP 584 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~ 584 (1170)
.++|+..++|+|+||+||++..+ +..+++|||..+.+... .....++-+++ .+|++....
T Consensus 380 ~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~------------------~~~~~~~~r~~p~~~~~~e~~ 441 (524)
T KOG0601|consen 380 NVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS------------------SGVFHHIDRLYPIAEILLEDY 441 (524)
T ss_pred ccccchhhhcccccccceeeccchhhhhcccccccccccee------------------cccccccccccccchhhcccc
Confidence 99999999999999999999886 78999999998743211 11122333444 356665556
Q ss_pred CCCccchhHHHHHHHHHhhc--CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 585 KIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
.+..++|++|||..+.+.++ |+..... ....+ ..+..|... ....++..+.+.++.+++..||.+.++..|.-
T Consensus 442 ~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--~~~~i--~~~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 442 PHLSKADIFSLGLSVDEAITGSPLSESGV--QSLTI--RSGDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred ccccccccccccccccccccCcccCcccc--cceee--ecccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 78899999999999999886 3322111 11111 122222222 22257788999999999999999999988753
No 488
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.28 E-value=1.8e-11 Score=114.93 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=82.1
Q ss_pred CceEEEEEcCCC--ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 001059 1064 GTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1141 (1170)
Q Consensus 1064 ~~~vlv~~~~~~--~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~ 1141 (1170)
|.++.|++...+ ....+|++++..||..|++|++++. .+++++++++|++.|+++++++|++|.++++|+||++.++
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~~-~~~l~k~i~~a~~~g~~~~iiiG~~e~~~~~v~vk~~~~~ 79 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDR-NERPGVKFADADLIGIPYRIVVGKKSAAEGIVEIKVRKTG 79 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCCcccchhHHHhcCCCEEEEECCchhhCCEEEEEECCCC
Confidence 467888888632 4678999999999999999998876 6799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHH
Q 001059 1142 KEKEVQRESLVRFL 1155 (1170)
Q Consensus 1142 eq~~v~~~~l~~~l 1155 (1170)
++..++++++.+.+
T Consensus 80 ~~~~~~~~~~~~~l 93 (94)
T cd00861 80 EKEEISIDELLEFL 93 (94)
T ss_pred cceEEeHHHHHHhh
Confidence 99999999987765
No 489
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.26 E-value=3.3e-11 Score=112.17 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=82.3
Q ss_pred CceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 001059 1064 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1143 (1170)
Q Consensus 1064 ~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq 1143 (1170)
|.+++|++.+ +....+|++++..||+.|++|++++. .+++++++++|++.|++++|++|++|..+++++++|+.++++
T Consensus 1 p~~v~ii~~~-~~~~~~a~~~~~~Lr~~g~~v~~d~~-~~~~~~~~~~a~~~g~~~~iiig~~e~~~~~v~lk~~~~~~~ 78 (91)
T cd00860 1 PVQVVVIPVT-DEHLDYAKEVAKKLSDAGIRVEVDLR-NEKLGKKIREAQLQKIPYILVVGDKEVETGTVSVRTRDGGDL 78 (91)
T ss_pred CeEEEEEeeC-chHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcc
Confidence 4578888875 66789999999999999999998876 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHH
Q 001059 1144 KEVQRESLVRFL 1155 (1170)
Q Consensus 1144 ~~v~~~~l~~~l 1155 (1170)
..++++++++.+
T Consensus 79 ~~~~~~~~~~~~ 90 (91)
T cd00860 79 GSMSLDEFIEKL 90 (91)
T ss_pred ceEcHHHHHHHh
Confidence 999999987654
No 490
>cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain. GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=99.25 E-value=4.7e-11 Score=117.70 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=86.4
Q ss_pred CCCCceEEEEEcCC-CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcC
Q 001059 1061 NEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1139 (1170)
Q Consensus 1061 ~~~~~~vlv~~~~~-~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~ 1139 (1170)
..++.+|+|++.+. +.....|++++..||+.|++|++++. +++++++++|++.|+++++++|++|.++|+|+||++.
T Consensus 23 ~lap~~v~Ii~~~~~~~~~~~a~~la~~LR~~gi~v~~d~~--~sl~kqlk~A~k~g~~~~iiiG~~e~~~~~v~lk~l~ 100 (121)
T cd00858 23 ALAPIKVAVLPLVKRDELVEIAKEISEELRELGFSVKYDDS--GSIGRRYARQDEIGTPFCVTVDFDTLEDGTVTIRERD 100 (121)
T ss_pred CcCCcEEEEEecCCcHHHHHHHHHHHHHHHHCCCEEEEeCC--CCHHHHHHHhHhcCCCEEEEECcCchhCCEEEEEECC
Confidence 35678899998741 34678999999999999999998775 6999999999999999999999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHH
Q 001059 1140 VKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1140 ~~eq~~v~~~~l~~~l~~~l 1159 (1170)
++++.+++++++.+.+..++
T Consensus 101 ~~~~~~v~l~~l~~~l~~~~ 120 (121)
T cd00858 101 SMRQVRVKIEELPSYLRELI 120 (121)
T ss_pred CCceEEEEHHHHHHHHHHHh
Confidence 99999999999988887654
No 491
>cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only, and an additional C-terminal zinc-binding domain specific to this subfamily of aaRSs.
Probab=99.24 E-value=4.9e-11 Score=127.94 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=94.8
Q ss_pred CCCCCceEEEEEcCCCc------cHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1060 RNEAGTSVLVCSRGGGG------LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1060 ~~~~~~~vlv~~~~~~~------~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
+..+|.+|+|++++ +. ...++.++++.||+.|++|++++....++++++++|+.+|+|++|+||++|+++|+|
T Consensus 6 ~~iAP~qVvIipi~-~~~~~~~~~~~~a~~i~~~Lr~~Girv~~D~r~~~s~g~K~~~ae~~GvP~~I~IG~~Ele~g~V 84 (202)
T cd00862 6 PRVAPIQVVIVPIG-IKDEKREEVLEAADELAERLKAAGIRVHVDDRDNYTPGWKFNDWELKGVPLRIEIGPRDLEKNTV 84 (202)
T ss_pred hhhcCceEEEEEec-CCccchHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHhHHHHHHHhCCCCEEEEECcchhhCCEE
Confidence 34678999999985 33 678899999999999999999887433999999999999999999999999999999
Q ss_pred EEEEcCCCcccccchHHHHHHHHHHHHhhccCC
Q 001059 1134 KVRHLDVKKEKEVQRESLVRFLLDAIASQFRNP 1166 (1170)
Q Consensus 1134 ~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~~~ 1166 (1170)
+|++++++++..++++++++.+..+|+..++|+
T Consensus 85 ~v~~Rd~~ek~~v~~~el~~~i~~ll~~i~~~l 117 (202)
T cd00862 85 VIVRRDTGEKKTVPLAELVEKVPELLDEIQEDL 117 (202)
T ss_pred EEEEecCCcceEEEHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988888777653
No 492
>PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed
Probab=99.23 E-value=3.7e-11 Score=139.28 Aligned_cols=123 Identities=11% Similarity=0.147 Sum_probs=98.9
Q ss_pred hhhHHhHHHHHHHHcCCcccccccee----c--cCC--CcccccceEEEeccCCceeeecCCCCHHHHHHHHhC---CCC
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMY----L--LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 797 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~--~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~---~~~ 797 (1170)
...+++.++++|..+||.||.||.|. + .+. +....+.||.+ ++.++|||++|++++|+++.+ ...
T Consensus 206 ~s~Le~aIR~~f~~~GF~EV~TPtLt~ee~~e~~g~~~g~~i~~~my~i----deel~LRpsLtPsLlr~la~n~k~~~~ 281 (417)
T PRK09537 206 LGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLAPGLYNYLRKLDRILPD 281 (417)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHHHhCCCCcccchhhheee----CCceEehhhhHHHHHHHHHhhhhcccC
Confidence 56899999999999999999999991 1 111 23345788876 247999999999999988764 356
Q ss_pred ceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 798 SFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
|+|+||+|+|||+|.++. +.+||+|+|++++|.+...+| +..++.++|+.||+. |++.
T Consensus 282 P~RIFEIG~VFR~E~~g~~hlrEf~Ql~~~iiGs~~~f~d--L~~lleeLL~~LGI~--f~i~ 340 (417)
T PRK09537 282 PIKIFEIGPCYRKESDGKEHLEEFTMVNFCQMGSGCTREN--LENIIDDFLKHLGID--YEII 340 (417)
T ss_pred CeeEEEEeceEecCCCCCCCcceEEEEEEEEeCCchHHHH--HHHHHHHHHHHCCCC--cEEe
Confidence 999999999999986654 445799999999997766655 669999999999984 6665
No 493
>PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional
Probab=99.20 E-value=1.4e-10 Score=136.85 Aligned_cols=164 Identities=10% Similarity=0.030 Sum_probs=121.7
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccc-e---------eccCCCcc--cccceEEEeccC-----
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP-M---------YLLGDCPQ--FKRNTVKLLTHG----- 773 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~-~---------~~~~~~~~--~~~~my~f~D~~----- 773 (1170)
.|-...| +...+-..--...+.+.++++|..-||+++.+|. + ++...... .....|.+.++.
T Consensus 214 yn~~~~~-~~~~~g~~HPl~~~~~~i~~if~~mGF~e~~~~~~ves~f~NFDaL~~PqdHPARd~~DTFyl~~~~~~~~~ 292 (494)
T PTZ00326 214 YNFNALG-KKIGGGNLHPLLKVRREFREILLEMGFEEMPTNRYVESSFWNFDALFQPQQHPARDAQDTFFLSKPETSKVN 292 (494)
T ss_pred ceecCCC-CCCCCCCCChHHHHHHHHHHHHHhCCCEEecCCCCccccchhhhhhcCCCCCCCCCcCceEEEcCccccccc
Confidence 3433344 3333334445678899999999999999998873 3 11111110 124456554321
Q ss_pred --------------------------------CceeeecCCCCHHHHHHHHhCC-------C-CceeEEEecCeEEcCCC
Q 001059 774 --------------------------------GDLLELSHELRLPFIRWAISNQ-------K-SSFKRYEISSVYRRAIG 813 (1170)
Q Consensus 774 --------------------------------G~~laLRPD~T~~iaR~~~~~~-------~-~P~r~~Y~g~VfR~e~~ 813 (1170)
.+.++||+++|++.+|+++++. . .|+|+|++|+|||+|.+
T Consensus 293 ~~p~~~~~~Vk~~He~G~~gS~Gw~y~W~~e~a~~~vLRtHtTa~~aR~l~~~~~~~~~~~~~~P~k~fsigrVfR~d~~ 372 (494)
T PTZ00326 293 DLDDDYVERVKKVHEVGGYGSIGWRYDWKLEEARKNILRTHTTAVSARMLYKLAQEYKKTGPFKPKKYFSIDRVFRNETL 372 (494)
T ss_pred cCcHHHHHHHHHHhccCCcCCcccccccccchhccccccCCCCHHHHHHHHhhccccccccCCCCceEEecCCEecCCCC
Confidence 1478999999999999999852 2 39999999999999876
Q ss_pred C-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCc-ceE-----------------------EEeCcHHHHH-
Q 001059 814 H-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCD-----------------------IHLNHGDLLE- 867 (1170)
Q Consensus 814 ~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~-~~~-----------------------i~lg~~~il~- 867 (1170)
+ ++..+|+|+++.++|.+. ++++++.++.++++++|+.+ .|+ |+|++.++++
T Consensus 373 DatH~~eFhQ~Eg~vi~~~~--s~~~L~~~l~~f~~~lG~~~~RfrP~yfPfTEPS~Ev~v~~~~~gkWIEIgg~Gm~rp 450 (494)
T PTZ00326 373 DATHLAEFHQVEGFVIDRNL--TLGDLIGTIREFFRRIGITKLRFKPAFNPYTEPSMEIFGYHPGLKKWVEVGNSGIFRP 450 (494)
T ss_pred CCCcCceeEEEEEEEEeCCC--CHHHHHHHHHHHHHhcCCCceEEecCCCCCCCCeeEEEEEecCCCcEEEEeCcCccCH
Confidence 5 455679999999999775 78999999999999999853 265 8999999998
Q ss_pred HHHHHhCCCH
Q 001059 868 AIWSWAGIKA 877 (1170)
Q Consensus 868 ~~l~~lgl~~ 877 (1170)
.+++.+|+++
T Consensus 451 evL~~~Gi~~ 460 (494)
T PTZ00326 451 EMLRPMGFPE 460 (494)
T ss_pred HHHHhcCCCC
Confidence 9999999964
No 494
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.17 E-value=9.5e-11 Score=140.39 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=56.4
Q ss_pred EEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhcc
Q 001059 469 LYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVE-GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 544 (1170)
Q Consensus 469 l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~-gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~ 544 (1170)
-+++|||++| +|.+..... ...+ ...++.+++. .+..+|..|++|+|+||.||+++.++.++|+|||++..+.
T Consensus 233 ~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 233 RVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 4899999976 676655421 1222 2345556655 4788999999999999999999999999999999998653
No 495
>cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS). In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b).
Probab=99.15 E-value=2.6e-10 Score=106.71 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=81.2
Q ss_pred CceEEEEEcCCC---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCC
Q 001059 1064 GTSVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1140 (1170)
Q Consensus 1064 ~~~vlv~~~~~~---~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~ 1140 (1170)
|.+++|++.+ + .....|++++..||..|++|++.+. .+++++++++|++.|+++++++|++|+.+++++++++.+
T Consensus 1 p~~v~ii~~~-~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~-~~~~~k~~~~a~~~g~~~~iiig~~e~~~~~v~i~~~~~ 78 (94)
T cd00738 1 PIDVAIVPLT-DPRVEAREYAQKLLNALLANGIRVLYDDR-ERKIGKKFREADLRGVPFAVVVGEDELENGKVTVKSRDT 78 (94)
T ss_pred CeEEEEEECC-CCcHHHHHHHHHHHHHHHHCCCEEEecCC-CcCHhHHHHHHHhCCCCEEEEECCChhhCCEEEEEECCC
Confidence 4578888875 5 6789999999999999999998775 579999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHH
Q 001059 1141 KKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1141 ~eq~~v~~~~l~~~l 1155 (1170)
+++..++++++.+.|
T Consensus 79 ~~~~~~~~~~~~~~i 93 (94)
T cd00738 79 GESETLHVDELPEFL 93 (94)
T ss_pred CceeEEEHHHHHhhc
Confidence 999999999887654
No 496
>cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain. Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ.
Probab=99.14 E-value=2.9e-10 Score=122.61 Aligned_cols=130 Identities=13% Similarity=0.127 Sum_probs=101.9
Q ss_pred hhhHHhHHHHHHHHcCCccccccceec----cCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCC-CCceeEEE
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYE 803 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~-~~P~r~~Y 803 (1170)
++.+++.++++|..+||++|.||.|.. ...+.. .+.+..+.+..++..+|||++|+++++.++.|. ..|+|+||
T Consensus 2 ~~~~~~~~r~~l~~~Gf~Ev~t~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~LR~s~~~~l~~~~~~n~~~~~~~lfe 80 (211)
T cd00768 2 RSKIEQKLRRFMAELGFQEVETPIVEREPLLEKAGHE-PKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAE 80 (211)
T ss_pred HHHHHHHHHHHHHHcCCEEeEcceecHHHHHHHcCcc-HhheeeeecCCCCEEEECCCCcHHHHHHHHhhcccCCEEEEE
Confidence 568899999999999999999999921 111211 245666677778999999999999999998764 45999999
Q ss_pred ecCeEEcCCCC---CCCCceeEeEEEEeCCCCc--ccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 804 ISSVYRRAIGH---SPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 804 ~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~--~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+|||.+... .+.+||+|+|++++|.... ....+++.++.++++.+|+..++.+.
T Consensus 81 ig~vfr~e~~~~~~~~~~ef~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~lg~~~~~~~~ 141 (211)
T cd00768 81 IGPAFRNEGGRRGLRRVREFTQLEGEVFGEDGEEASEFEELIELTEELLRALGIKLDIVFV 141 (211)
T ss_pred EcceeecCCCccccccceeEEEcCEEEEcCCchhHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 99999986543 2346899999999997653 25689999999999999974224443
No 497
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=1.2e-10 Score=127.39 Aligned_cols=245 Identities=18% Similarity=0.244 Sum_probs=153.1
Q ss_pred EEEEEEEccCCcEEEEEEEecCC-CChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCccccccc
Q 001059 370 HVVLCKNKLDGRHYAVKKIRLKD-KSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 447 (1170)
Q Consensus 370 ~Vyka~~~~tg~~vAVK~i~~~~-~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~ 447 (1170)
.||++.+...|.+|+.--+.... +... .......=+.-|-++.|-|||+++.+|-+..
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K-------------------- 140 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKK-------------------- 140 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------------------
Confidence 35666666666665544332110 0000 1111222244556668999999998884431
Q ss_pred ccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCC
Q 001059 448 SNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQ--GIIHRDLT 520 (1170)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~yLHs~--gIiHrDLK 520 (1170)
..+.....+++||+. |++.+.|++. ..+......+|+.||+.||.|||+. -|+|+++.
T Consensus 141 ---------------~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlT 205 (458)
T KOG1266|consen 141 ---------------YEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLT 205 (458)
T ss_pred ---------------cccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcc
Confidence 124566788999996 7999988753 3477777889999999999999986 49999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
.+-|++..+|-+||+---..... . ..............+-++|.|||.=.. .+.+-++|||+||....
T Consensus 206 c~tifiq~ngLIkig~~ap~s~h-------~----s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 206 CDTIFIQHNGLIKIGSVAPDSTH-------P----SVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCAL 273 (458)
T ss_pred hhheeecCCceEEecccCccccc-------h----hhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHH
Confidence 99999999999998621111100 0 000000111223457789999996544 34677899999999999
Q ss_pred Hhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 601 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 601 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||.- |-......+....+..-.... -.+-.+.+|.+|+...|..||++.+++.||+.-.+.
T Consensus 274 emailEiq~tnseS~~~~ee~ia~~i~~l------en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 274 EMAILEIQSTNSESKVEVEENIANVIIGL------ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred HHHHheeccCCCcceeehhhhhhhheeec------cCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 9952 322221111110000000000 011235689999999999999999999999765553
No 498
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.11 E-value=1.3e-09 Score=130.04 Aligned_cols=221 Identities=18% Similarity=0.234 Sum_probs=146.0
Q ss_pred EEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccc
Q 001059 373 LCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452 (1170)
Q Consensus 373 ka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (1170)
.|..+.++.+|.|...+.... .......+-++.|+.++||||++|++++.+
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--------------------------- 80 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEE--------------------------- 80 (690)
T ss_pred ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcc---------------------------
Confidence 466778899999999886655 455667888999999999999999987732
Q ss_pred cccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCceeecCCCC
Q 001059 453 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARND 531 (1170)
Q Consensus 453 ~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH-s~gIiHrDLKp~NILi~~~~~ 531 (1170)
...+|||+|-+-. |..++.+ +....+...++||+.||.||| +.+++|++|.-+.|+++..|.
T Consensus 81 -------------~~~~ylvTErV~P-l~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge 143 (690)
T KOG1243|consen 81 -------------EGTLYLVTERVRP-LETVLKE---LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE 143 (690)
T ss_pred -------------cCceEEEeecccc-HHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc
Confidence 4578999999832 3333333 226667778899999999997 678999999999999999999
Q ss_pred EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCCCchhH
Q 001059 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAME 611 (1170)
Q Consensus 532 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~ 611 (1170)
.||++|-+++....... ......---.|..|+.+.. ..-..|.|-|||++||++.++.....
T Consensus 144 WkLggle~v~~~~~~~~---------------~~~~~~~~~s~~~P~~~~~---s~~s~D~~~Lg~li~el~ng~~~~~~ 205 (690)
T KOG1243|consen 144 WKLGGLELVSKASGFNA---------------PAKSLYLIESFDDPEEIDP---SEWSIDSWGLGCLIEELFNGSLLTKT 205 (690)
T ss_pred EEEeeeEEEeccccCCc---------------ccccchhhhcccChhhcCc---cccchhhhhHHHHHHHHhCcccCcch
Confidence 99999998864321100 0011111223556664433 12457999999999999975322211
Q ss_pred HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH-----hccCCCCchHHH
Q 001059 612 RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL-----QDALPPQMEYEL 670 (1170)
Q Consensus 612 ~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL-----~~~~~~~~~~~~ 670 (1170)
. +...+.+| .....+-.+-+...+..||.....+ -|.||++...+.
T Consensus 206 ~------~~~~~~ip-------k~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~ 256 (690)
T KOG1243|consen 206 D------LSNTGKIP-------KALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDT 256 (690)
T ss_pred h------hhccCccc-------hhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHH
Confidence 1 11122222 1223334344455566676644433 366777665443
No 499
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.11 E-value=1.2e-10 Score=141.28 Aligned_cols=155 Identities=19% Similarity=0.298 Sum_probs=92.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----------------------------h----hhHHHH
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------------------L----PVNDRI 401 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----------------------------~----~~~~~~ 401 (1170)
..+|+. +.||+|++|+||+|+.+.+|+.||||+++..-.. . +..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 7899999999999999977999999999743100 0 111222
Q ss_pred HHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cH
Q 001059 402 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TL 480 (1170)
Q Consensus 402 ~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL 480 (1170)
.+|+...+.. +|+.++...|...... ......| .....-++|||||.| .+
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~v-~VP~v~~--------------------------d~st~~VLvmE~i~G~~l 248 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDML-YVPEVYW--------------------------DYCSETVMVMERMYGIPV 248 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCCe-ecceeec--------------------------ccCCCceEEEeeecCccH
Confidence 2333332222 2333332222100000 0000000 012335799999986 66
Q ss_pred HHH--HHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccc
Q 001059 481 RQV--FESYD----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKL 545 (1170)
Q Consensus 481 ~~~--l~~~~----~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~ 545 (1170)
.++ +...+ .+.+..+..++.|++ ..|++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 249 ~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 249 SDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 653 33322 233444444555544 58999999999999999888 999999999987643
No 500
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.10 E-value=2.3e-10 Score=118.92 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=93.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCcee-EEEEEeecCccccCCCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR-YYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~-l~~~~~e~~~~~~~~~~~~~ 438 (1170)
++.|+.|.++.||+++.. |..|++|+...... ....+.+|+.+++.+.+.++++ ++...
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--------------- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--------------- 62 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe---------------
Confidence 467899999999999875 88899998753321 1224678999999997666543 44221
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI--- 514 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI--- 514 (1170)
...-++||||++| ++... . .....++.+++.+|+.||+.++
T Consensus 63 ---------------------------~~~~~lv~e~i~G~~l~~~----~----~~~~~~~~~l~~~l~~LH~~~~~~~ 107 (170)
T cd05151 63 ---------------------------PETGVLITEFIEGSELLTE----D----FSDPENLEKIAKLLKKLHSSPLPDL 107 (170)
T ss_pred ---------------------------CCCCeEEEEecCCCccccc----c----ccCHHHHHHHHHHHHHHhCCCCCCc
Confidence 0113799999987 44332 0 1123456799999999999985
Q ss_pred --cccCCCCCceeecCCCCEEEeecCcchh
Q 001059 515 --IHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 515 --iHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+|+|++|.||+++ ++.++++|||.+..
T Consensus 108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred eeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9999999999999 67899999999863
Done!